##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM16823v2 #!genome-build-accession NCBI_Assembly:GCF_000168235.2 #!annotation-date 07/24/2026 18:57:45 #!annotation-source NCBI RefSeq GCF_000168235.2-RS_2026_07_24 ##sequence-region NC_009141.1 1 182913 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NC_009141.1 RefSeq region 1 182913 . + . ID=NC_009141.1:1..182913;Dbxref=taxon:373665;Is_circular=true;Name=pIP1202;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=plasmid;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;plasmid-name=pIP1202;strain=IP275 NC_009141.1 RefSeq gene 323 862 . + . ID=gene-YPIP275_RS25030;Name=mobI;gbkey=Gene;gene=mobI;gene_biotype=protein_coding;locus_tag=YPIP275_RS25030;old_locus_tag=YpIP275_pIP1202_0001 NC_009141.1 Protein Homology CDS 323 862 . + 0 ID=cds-WP_001447712.1;Parent=gene-YPIP275_RS25030;Dbxref=GenBank:WP_001447712.1;Name=WP_001447712.1;gbkey=CDS;gene=mobI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221098.1;locus_tag=YPIP275_RS25030;product=conjugative transfer protein MobI(A/C);protein_id=WP_001447712.1;transl_table=11 NC_009141.1 RefSeq gene 867 1154 . + . ID=gene-YPIP275_RS25035;Name=YPIP275_RS25035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25035;old_locus_tag=YpIP275_pIP1202_0002 NC_009141.1 Protein Homology CDS 867 1154 . + 0 ID=cds-WP_000127321.1;Parent=gene-YPIP275_RS25035;Dbxref=GenBank:WP_000127321.1;Name=WP_000127321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221099.1;locus_tag=YPIP275_RS25035;product=hypothetical protein;protein_id=WP_000127321.1;transl_table=11 NC_009141.1 RefSeq gene 1139 2239 . + . ID=gene-YPIP275_RS25040;Name=YPIP275_RS25040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25040;old_locus_tag=YpIP275_pIP1202_0003 NC_009141.1 Protein Homology CDS 1139 2239 . + 0 ID=cds-WP_000350011.1;Parent=gene-YPIP275_RS25040;Dbxref=GenBank:WP_000350011.1;Name=WP_000350011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221100.1;locus_tag=YPIP275_RS25040;product=RepB family plasmid replication initiator protein;protein_id=WP_000350011.1;transl_table=11 NC_009141.1 RefSeq gene 3037 3189 . + . ID=gene-YPIP275_RS29105;Name=YPIP275_RS29105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29105 NC_009141.1 GeneMarkS-2+ CDS 3037 3189 . + 0 ID=cds-WP_001337765.1;Parent=gene-YPIP275_RS29105;Dbxref=GenBank:WP_001337765.1;Name=WP_001337765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS29105;product=hypothetical protein;protein_id=WP_001337765.1;transl_table=11 NC_009141.1 RefSeq gene 3276 3710 . - . ID=gene-YPIP275_RS25050;Name=YPIP275_RS25050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25050;old_locus_tag=YpIP275_pIP1202_0005 NC_009141.1 Protein Homology CDS 3276 3710 . - 0 ID=cds-WP_000883925.1;Parent=gene-YPIP275_RS25050;Dbxref=GenBank:WP_000883925.1;Name=WP_000883925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220950.1;locus_tag=YPIP275_RS25050;product=hypothetical protein;protein_id=WP_000883925.1;transl_table=11 NC_009141.1 RefSeq gene 3728 4843 . - . ID=gene-YPIP275_RS25055;Name=YPIP275_RS25055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25055;old_locus_tag=YpIP275_pIP1202_0006 NC_009141.1 Protein Homology CDS 3728 4843 . - 0 ID=cds-WP_000946102.1;Parent=gene-YPIP275_RS25055;Dbxref=GenBank:WP_000946102.1;Name=WP_000946102.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220951.1;locus_tag=YPIP275_RS25055;product=phosphoadenosine phosphosulfate reductase domain-containing protein;protein_id=WP_000946102.1;transl_table=11 NC_009141.1 RefSeq gene 5112 5720 . + . ID=gene-YPIP275_RS25060;Name=YPIP275_RS25060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25060;old_locus_tag=YpIP275_pIP1202_0007 NC_009141.1 Protein Homology CDS 5112 5720 . + 0 ID=cds-WP_000849071.1;Parent=gene-YPIP275_RS25060;Dbxref=GenBank:WP_000849071.1;Name=WP_000849071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220953.1;locus_tag=YPIP275_RS25060;product=hypothetical protein;protein_id=WP_000849071.1;transl_table=11 NC_009141.1 RefSeq gene 5725 6246 . + . ID=gene-YPIP275_RS25065;Name=YPIP275_RS25065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25065;old_locus_tag=YpIP275_pIP1202_0008 NC_009141.1 Protein Homology CDS 5725 6246 . + 0 ID=cds-WP_000393785.1;Parent=gene-YPIP275_RS25065;Dbxref=GenBank:WP_000393785.1;Name=WP_000393785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220954.1;locus_tag=YPIP275_RS25065;product=hypothetical protein;protein_id=WP_000393785.1;transl_table=11 NC_009141.1 RefSeq gene 6249 6770 . + . ID=gene-YPIP275_RS25070;Name=YPIP275_RS25070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25070;old_locus_tag=YpIP275_pIP1202_0009 NC_009141.1 Protein Homology CDS 6249 6770 . + 0 ID=cds-WP_000805800.1;Parent=gene-YPIP275_RS25070;Dbxref=GenBank:WP_000805800.1;Name=WP_000805800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220955.1;locus_tag=YPIP275_RS25070;product=hypothetical protein;protein_id=WP_000805800.1;transl_table=11 NC_009141.1 RefSeq gene 6867 7340 . + . ID=gene-YPIP275_RS25075;Name=YPIP275_RS25075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25075;old_locus_tag=YpIP275_pIP1202_0010 NC_009141.1 Protein Homology CDS 6867 7340 . + 0 ID=cds-WP_000057877.1;Parent=gene-YPIP275_RS25075;Dbxref=GenBank:WP_000057877.1;Name=WP_000057877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220956.1;locus_tag=YPIP275_RS25075;product=hypothetical protein;protein_id=WP_000057877.1;transl_table=11 NC_009141.1 RefSeq gene 7351 7644 . + . ID=gene-YPIP275_RS25080;Name=YPIP275_RS25080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25080;old_locus_tag=YpIP275_pIP1202_0011 NC_009141.1 Protein Homology CDS 7351 7644 . + 0 ID=cds-WP_001370730.1;Parent=gene-YPIP275_RS25080;Dbxref=GenBank:WP_001370730.1;Name=WP_001370730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220957.1;locus_tag=YPIP275_RS25080;product=hypothetical protein;protein_id=WP_001370730.1;transl_table=11 NC_009141.1 RefSeq gene 7649 8503 . + . ID=gene-YPIP275_RS25085;Name=YPIP275_RS25085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25085;old_locus_tag=YpIP275_pIP1202_0012 NC_009141.1 Protein Homology CDS 7649 8503 . + 0 ID=cds-WP_000539392.1;Parent=gene-YPIP275_RS25085;Dbxref=GenBank:WP_000539392.1;Name=WP_000539392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220958.1;locus_tag=YPIP275_RS25085;product=hypothetical protein;protein_id=WP_000539392.1;transl_table=11 NC_009141.1 RefSeq gene 8503 9462 . + . ID=gene-YPIP275_RS25090;Name=YPIP275_RS25090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25090;old_locus_tag=YpIP275_pIP1202_0013 NC_009141.1 Protein Homology CDS 8503 9462 . + 0 ID=cds-WP_000829616.1;Parent=gene-YPIP275_RS25090;Dbxref=GenBank:WP_000829616.1;Name=WP_000829616.1;Ontology_term=GO:0006508,GO:0051604,GO:0008236,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220959.1;locus_tag=YPIP275_RS25090;product=S49 family peptidase;protein_id=WP_000829616.1;transl_table=11 NC_009141.1 RefSeq gene 9478 10338 . + . ID=gene-YPIP275_RS25095;Name=YPIP275_RS25095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25095;old_locus_tag=YpIP275_pIP1202_0014 NC_009141.1 Protein Homology CDS 9478 10338 . + 0 ID=cds-WP_000139698.1;Parent=gene-YPIP275_RS25095;Dbxref=GenBank:WP_000139698.1;Name=WP_000139698.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220960.1;locus_tag=YPIP275_RS25095;product=DsbA family protein;protein_id=WP_000139698.1;transl_table=11 NC_009141.1 RefSeq gene 10372 10800 . + . ID=gene-YPIP275_RS25100;Name=YPIP275_RS25100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25100;old_locus_tag=YpIP275_pIP1202_0015 NC_009141.1 Protein Homology CDS 10372 10800 . + 0 ID=cds-WP_000591074.1;Parent=gene-YPIP275_RS25100;Dbxref=GenBank:WP_000591074.1;Name=WP_000591074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220961.1;locus_tag=YPIP275_RS25100;product=hypothetical protein;protein_id=WP_000591074.1;transl_table=11 NC_009141.1 RefSeq gene 10857 11216 . + . ID=gene-YPIP275_RS25105;Name=YPIP275_RS25105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25105;old_locus_tag=YpIP275_pIP1202_0016 NC_009141.1 Protein Homology CDS 10857 11216 . + 0 ID=cds-WP_000422768.1;Parent=gene-YPIP275_RS25105;Dbxref=GenBank:WP_000422768.1;Name=WP_000422768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220962.1;locus_tag=YPIP275_RS25105;product=hypothetical protein;protein_id=WP_000422768.1;transl_table=11 NC_009141.1 RefSeq gene 11216 11662 . + . ID=gene-YPIP275_RS25110;Name=YPIP275_RS25110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25110;old_locus_tag=YpIP275_pIP1202_0017 NC_009141.1 Protein Homology CDS 11216 11662 . + 0 ID=cds-WP_000919345.1;Parent=gene-YPIP275_RS25110;Dbxref=GenBank:WP_000919345.1;Name=WP_000919345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220963.1;locus_tag=YPIP275_RS25110;product=Fe3+-siderophore ABC transporter permease;protein_id=WP_000919345.1;transl_table=11 NC_009141.1 RefSeq gene 11659 12177 . + . ID=gene-YPIP275_RS25115;Name=YPIP275_RS25115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25115;old_locus_tag=YpIP275_pIP1202_0018 NC_009141.1 Protein Homology CDS 11659 12177 . + 0 ID=cds-WP_000210756.1;Parent=gene-YPIP275_RS25115;Dbxref=GenBank:WP_000210756.1;Name=WP_000210756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220964.1;locus_tag=YPIP275_RS25115;product=nitrite reductase;protein_id=WP_000210756.1;transl_table=11 NC_009141.1 RefSeq gene 12177 12407 . + . ID=gene-YPIP275_RS25120;Name=YPIP275_RS25120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25120;old_locus_tag=YpIP275_pIP1202_0019 NC_009141.1 Protein Homology CDS 12177 12407 . + 0 ID=cds-WP_000972663.1;Parent=gene-YPIP275_RS25120;Dbxref=GenBank:WP_000972663.1;Name=WP_000972663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220965.1;locus_tag=YPIP275_RS25120;product=hypothetical protein;protein_id=WP_000972663.1;transl_table=11 NC_009141.1 RefSeq gene 12394 13251 . + . ID=gene-YPIP275_RS25125;Name=YPIP275_RS25125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25125;old_locus_tag=YpIP275_pIP1202_0020 NC_009141.1 Protein Homology CDS 12394 13251 . + 0 ID=cds-WP_001167032.1;Parent=gene-YPIP275_RS25125;Dbxref=GenBank:WP_001167032.1;Name=WP_001167032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220966.1;locus_tag=YPIP275_RS25125;product=hypothetical protein;protein_id=WP_001167032.1;transl_table=11 NC_009141.1 RefSeq gene 13277 13465 . + . ID=gene-YPIP275_RS25130;Name=YPIP275_RS25130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25130 NC_009141.1 GeneMarkS-2+ CDS 13277 13465 . + 0 ID=cds-WP_001270411.1;Parent=gene-YPIP275_RS25130;Dbxref=GenBank:WP_001270411.1;Name=WP_001270411.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS25130;product=hypothetical protein;protein_id=WP_001270411.1;transl_table=11 NC_009141.1 RefSeq gene 13482 14009 . + . ID=gene-YPIP275_RS25135;Name=YPIP275_RS25135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25135;old_locus_tag=YpIP275_pIP1202_0021 NC_009141.1 Protein Homology CDS 13482 14009 . + 0 ID=cds-WP_001236377.1;Parent=gene-YPIP275_RS25135;Dbxref=GenBank:WP_001236377.1;Name=WP_001236377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220968.1;locus_tag=YPIP275_RS25135;product=thermonuclease family protein;protein_id=WP_001236377.1;transl_table=11 NC_009141.1 RefSeq gene 14067 14339 . + . ID=gene-YPIP275_RS25140;Name=YPIP275_RS25140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25140;old_locus_tag=YpIP275_pIP1202_0022 NC_009141.1 Protein Homology CDS 14067 14339 . + 0 ID=cds-WP_001043047.1;Parent=gene-YPIP275_RS25140;Dbxref=GenBank:WP_001043047.1;Name=WP_001043047.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220969.1;locus_tag=YPIP275_RS25140;product=HU family DNA-binding protein;protein_id=WP_001043047.1;transl_table=11 NC_009141.1 RefSeq gene 14427 14720 . + . ID=gene-YPIP275_RS25145;Name=YPIP275_RS25145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25145;old_locus_tag=YpIP275_pIP1202_0023 NC_009141.1 Protein Homology CDS 14427 14720 . + 0 ID=cds-WP_001239997.1;Parent=gene-YPIP275_RS25145;Dbxref=GenBank:WP_001239997.1;Name=WP_001239997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220970.1;locus_tag=YPIP275_RS25145;product=chromosome segregation protein ParM;protein_id=WP_001239997.1;transl_table=11 NC_009141.1 RefSeq gene 14747 15049 . - . ID=gene-YPIP275_RS25150;Name=proR;gbkey=Gene;gene=proR;gene_biotype=protein_coding;locus_tag=YPIP275_RS25150;old_locus_tag=YpIP275_pIP1202_0024 NC_009141.1 Protein Homology CDS 14747 15049 . - 0 ID=cds-WP_000124640.1;Parent=gene-YPIP275_RS25150;Dbxref=GenBank:WP_000124640.1;Name=WP_000124640.1;gbkey=CDS;gene=proR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220971.1;locus_tag=YPIP275_RS25150;product=transcriptional regulator ProR;protein_id=WP_000124640.1;transl_table=11 NC_009141.1 RefSeq gene 15054 15404 . - . ID=gene-YPIP275_RS25155;Name=YPIP275_RS25155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25155;old_locus_tag=YpIP275_pIP1202_0025 NC_009141.1 Protein Homology CDS 15054 15404 . - 0 ID=cds-WP_000270043.1;Parent=gene-YPIP275_RS25155;Dbxref=GenBank:WP_000270043.1;Name=WP_000270043.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220972.1;locus_tag=YPIP275_RS25155;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000270043.1;transl_table=11 NC_009141.1 RefSeq gene 15567 16115 . + . ID=gene-YPIP275_RS25160;Name=YPIP275_RS25160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25160;old_locus_tag=YpIP275_pIP1202_0026 NC_009141.1 Protein Homology CDS 15567 16115 . + 0 ID=cds-WP_001061574.1;Parent=gene-YPIP275_RS25160;Dbxref=GenBank:WP_001061574.1;Name=WP_001061574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220973.1;locus_tag=YPIP275_RS25160;product=transcriptional regulator;protein_id=WP_001061574.1;transl_table=11 NC_009141.1 RefSeq gene 16237 16428 . - . ID=gene-YPIP275_RS29110;Name=YPIP275_RS29110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29110 NC_009141.1 GeneMarkS-2+ CDS 16237 16428 . - 0 ID=cds-WP_014342197.1;Parent=gene-YPIP275_RS29110;Dbxref=GenBank:WP_014342197.1;Name=WP_014342197.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS29110;product=hypothetical protein;protein_id=WP_014342197.1;transl_table=11 NC_009141.1 RefSeq gene 16456 16650 . + . ID=gene-YPIP275_RS29115;Name=YPIP275_RS29115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29115;old_locus_tag=YpIP275_pIP1202_0027 NC_009141.1 Protein Homology CDS 16456 16650 . + 0 ID=cds-WP_000343597.1;Parent=gene-YPIP275_RS29115;Dbxref=GenBank:WP_000343597.1;Name=WP_000343597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220975.1;locus_tag=YPIP275_RS29115;product=hypothetical protein;protein_id=WP_000343597.1;transl_table=11 NC_009141.1 RefSeq gene 16661 17032 . + . ID=gene-YPIP275_RS29120;Name=YPIP275_RS29120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29120;old_locus_tag=YpIP275_pIP1202_0028 NC_009141.1 Protein Homology CDS 16661 17032 . + 0 ID=cds-WP_000516916.1;Parent=gene-YPIP275_RS29120;Dbxref=GenBank:WP_000516916.1;Name=WP_000516916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220976.1;locus_tag=YPIP275_RS29120;product=hypothetical protein;protein_id=WP_000516916.1;transl_table=11 NC_009141.1 RefSeq gene 17025 17495 . + . ID=gene-YPIP275_RS25180;Name=YPIP275_RS25180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25180;old_locus_tag=YpIP275_pIP1202_0029 NC_009141.1 Protein Homology CDS 17025 17495 . + 0 ID=cds-WP_001281821.1;Parent=gene-YPIP275_RS25180;Dbxref=GenBank:WP_001281821.1;Name=WP_001281821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220977.1;locus_tag=YPIP275_RS25180;product=hypothetical protein;protein_id=WP_001281821.1;transl_table=11 NC_009141.1 RefSeq gene 17510 17845 . - . ID=gene-YPIP275_RS25185;Name=YPIP275_RS25185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25185;old_locus_tag=YpIP275_pIP1202_0030 NC_009141.1 Protein Homology CDS 17510 17845 . - 0 ID=cds-WP_000683476.1;Parent=gene-YPIP275_RS25185;Dbxref=GenBank:WP_000683476.1;Name=WP_000683476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220978.1;locus_tag=YPIP275_RS25185;product=hypothetical protein;protein_id=WP_000683476.1;transl_table=11 NC_009141.1 RefSeq gene 17942 18430 . + . ID=gene-YPIP275_RS25190;Name=YPIP275_RS25190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25190;old_locus_tag=YpIP275_pIP1202_0031 NC_009141.1 Protein Homology CDS 17942 18430 . + 0 ID=cds-WP_001273096.1;Parent=gene-YPIP275_RS25190;Dbxref=GenBank:WP_001273096.1;Name=WP_001273096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220979.1;locus_tag=YPIP275_RS25190;product=DUF1643 domain-containing protein;protein_id=WP_001273096.1;transl_table=11 NC_009141.1 RefSeq gene 18433 18930 . + . ID=gene-YPIP275_RS25195;Name=YPIP275_RS25195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25195;old_locus_tag=YpIP275_pIP1202_0032 NC_009141.1 Protein Homology CDS 18433 18930 . + 0 ID=cds-WP_000062185.1;Parent=gene-YPIP275_RS25195;Dbxref=GenBank:WP_000062185.1;Name=WP_000062185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220980.1;locus_tag=YPIP275_RS25195;product=hypothetical protein;protein_id=WP_000062185.1;transl_table=11 NC_009141.1 RefSeq gene 19492 20424 . + . ID=gene-YPIP275_RS25200;Name=YPIP275_RS25200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25200;old_locus_tag=YpIP275_pIP1202_0033 NC_009141.1 Protein Homology CDS 19492 20424 . + 0 ID=cds-WP_000434071.1;Parent=gene-YPIP275_RS25200;Dbxref=GenBank:WP_000434071.1;Name=WP_000434071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220982.1;locus_tag=YPIP275_RS25200;product=hypothetical protein;protein_id=WP_000434071.1;transl_table=11 NC_009141.1 RefSeq gene 20498 21961 . + . ID=gene-YPIP275_RS25205;Name=YPIP275_RS25205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25205;old_locus_tag=YpIP275_pIP1202_0034 NC_009141.1 Protein Homology CDS 20498 21961 . + 0 ID=cds-WP_001280522.1;Parent=gene-YPIP275_RS25205;Dbxref=GenBank:WP_001280522.1;Name=WP_001280522.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220983.1;locus_tag=YPIP275_RS25205;product=AAA family ATPase;protein_id=WP_001280522.1;transl_table=11 NC_009141.1 RefSeq gene 22117 22446 . + . ID=gene-YPIP275_RS25210;Name=YPIP275_RS25210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25210;old_locus_tag=YpIP275_pIP1202_0035 NC_009141.1 Protein Homology CDS 22117 22446 . + 0 ID=cds-WP_000277953.1;Parent=gene-YPIP275_RS25210;Dbxref=GenBank:WP_000277953.1;Name=WP_000277953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220985.1;locus_tag=YPIP275_RS25210;product=hypothetical protein;protein_id=WP_000277953.1;transl_table=11 NC_009141.1 RefSeq gene 22451 22843 . + . ID=gene-YPIP275_RS25215;Name=YPIP275_RS25215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25215;old_locus_tag=YpIP275_pIP1202_0036 NC_009141.1 Protein Homology CDS 22451 22843 . + 0 ID=cds-WP_000018404.1;Parent=gene-YPIP275_RS25215;Dbxref=GenBank:WP_000018404.1;Name=WP_000018404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018404.1;locus_tag=YPIP275_RS25215;product=hypothetical protein;protein_id=WP_000018404.1;transl_table=11 NC_009141.1 RefSeq gene 22892 23086 . + . ID=gene-YPIP275_RS25220;Name=YPIP275_RS25220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25220;old_locus_tag=YpIP275_pIP1202_0037 NC_009141.1 Protein Homology CDS 22892 23086 . + 0 ID=cds-WP_000757530.1;Parent=gene-YPIP275_RS25220;Dbxref=GenBank:WP_000757530.1;Name=WP_000757530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000757530.1;locus_tag=YPIP275_RS25220;product=DUF2997 domain-containing protein;protein_id=WP_000757530.1;transl_table=11 NC_009141.1 RefSeq gene 23131 24264 . + . ID=gene-YPIP275_RS25225;Name=YPIP275_RS25225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25225;old_locus_tag=YpIP275_pIP1202_0038 NC_009141.1 Protein Homology CDS 23131 24264 . + 0 ID=cds-WP_000225028.1;Parent=gene-YPIP275_RS25225;Dbxref=GenBank:WP_000225028.1;Name=WP_000225028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000225028.1;locus_tag=YPIP275_RS25225;product=hypothetical protein;protein_id=WP_000225028.1;transl_table=11 NC_009141.1 RefSeq gene 24276 24623 . + . ID=gene-YPIP275_RS25230;Name=YPIP275_RS25230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25230;old_locus_tag=YpIP275_pIP1202_0039 NC_009141.1 Protein Homology CDS 24276 24623 . + 0 ID=cds-WP_000039129.1;Parent=gene-YPIP275_RS25230;Dbxref=GenBank:WP_000039129.1;Name=WP_000039129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220989.1;locus_tag=YPIP275_RS25230;product=hypothetical protein;protein_id=WP_000039129.1;transl_table=11 NC_009141.1 RefSeq gene 24620 25048 . + . ID=gene-YPIP275_RS25235;Name=YPIP275_RS25235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25235;old_locus_tag=YpIP275_pIP1202_0040 NC_009141.1 Protein Homology CDS 24620 25048 . + 0 ID=cds-WP_000988987.1;Parent=gene-YPIP275_RS25235;Dbxref=GenBank:WP_000988987.1;Name=WP_000988987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220990.1;locus_tag=YPIP275_RS25235;product=hypothetical protein;protein_id=WP_000988987.1;transl_table=11 NC_009141.1 RefSeq gene 25041 25604 . + . ID=gene-YPIP275_RS25240;Name=YPIP275_RS25240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25240;old_locus_tag=YpIP275_pIP1202_0041 NC_009141.1 Protein Homology CDS 25041 25604 . + 0 ID=cds-WP_000004673.1;Parent=gene-YPIP275_RS25240;Dbxref=GenBank:WP_000004673.1;Name=WP_000004673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220991.1;locus_tag=YPIP275_RS25240;product=hypothetical protein;protein_id=WP_000004673.1;transl_table=11 NC_009141.1 RefSeq gene 25616 26104 . + . ID=gene-YPIP275_RS28285;Name=YPIP275_RS28285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28285;old_locus_tag=YpIP275_pIP1202_0042 NC_009141.1 Protein Homology CDS 25616 26104 . + 0 ID=cds-WP_001256127.1;Parent=gene-YPIP275_RS28285;Dbxref=GenBank:WP_001256127.1;Name=WP_001256127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220992.1;locus_tag=YPIP275_RS28285;product=hypothetical protein;protein_id=WP_001256127.1;transl_table=11 NC_009141.1 RefSeq gene 26043 26360 . + . ID=gene-YPIP275_RS25245;Name=YPIP275_RS25245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25245;old_locus_tag=YpIP275_pIP1202_0043 NC_009141.1 Protein Homology CDS 26043 26360 . + 0 ID=cds-WP_011742556.1;Parent=gene-YPIP275_RS25245;Dbxref=GenBank:WP_011742556.1;Name=WP_011742556.1;Ontology_term=GO:0030255;gbkey=CDS;go_process=protein secretion by the type IV secretion system|0030255||IEA;inference=COORDINATES: protein motif:HMM:NF016238.7;locus_tag=YPIP275_RS25245;product=VirB8 family type IV secretion system protein;protein_id=WP_011742556.1;transl_table=11 NC_009141.1 RefSeq gene 26371 27255 . + . ID=gene-YPIP275_RS25250;Name=YPIP275_RS25250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25250;old_locus_tag=YpIP275_pIP1202_0044 NC_009141.1 Protein Homology CDS 26371 27255 . + 0 ID=cds-WP_000735066.1;Parent=gene-YPIP275_RS25250;Dbxref=GenBank:WP_000735066.1;Name=WP_000735066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220994.1;locus_tag=YPIP275_RS25250;product=TrbG/VirB9 family P-type conjugative transfer protein;protein_id=WP_000735066.1;transl_table=11 NC_009141.1 RefSeq gene 27255 28415 . + . ID=gene-YPIP275_RS25255;Name=virB10;gbkey=Gene;gene=virB10;gene_biotype=protein_coding;locus_tag=YPIP275_RS25255;old_locus_tag=YpIP275_pIP1202_0045 NC_009141.1 Protein Homology CDS 27255 28415 . + 0 ID=cds-WP_000101710.1;Parent=gene-YPIP275_RS25255;Dbxref=GenBank:WP_000101710.1;Name=WP_000101710.1;gbkey=CDS;gene=virB10;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220995.1;locus_tag=YPIP275_RS25255;product=type IV secretion system protein VirB10;protein_id=WP_000101710.1;transl_table=11 NC_009141.1 RefSeq gene 28457 29452 . + . ID=gene-YPIP275_RS25260;Name=YPIP275_RS25260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25260;old_locus_tag=YpIP275_pIP1202_0046 NC_009141.1 Protein Homology CDS 28457 29452 . + 0 ID=cds-WP_000128596.1;Parent=gene-YPIP275_RS25260;Dbxref=GenBank:WP_000128596.1;Name=WP_000128596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220996.1;locus_tag=YPIP275_RS25260;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=WP_000128596.1;transl_table=11 NC_009141.1 RefSeq gene 29452 29985 . + . ID=gene-YPIP275_RS25265;Name=YPIP275_RS25265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25265;old_locus_tag=YpIP275_pIP1202_0047 NC_009141.1 Protein Homology CDS 29452 29985 . + 0 ID=cds-WP_000792636.1;Parent=gene-YPIP275_RS25265;Dbxref=GenBank:WP_000792636.1;Name=WP_000792636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220997.1;locus_tag=YPIP275_RS25265;product=phospholipase D family nuclease;protein_id=WP_000792636.1;transl_table=11 NC_009141.1 RefSeq gene 30159 30464 . - . ID=gene-YPIP275_RS28290;Name=YPIP275_RS28290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28290;old_locus_tag=YpIP275_pIP1202_0048 NC_009141.1 Protein Homology CDS 30159 30464 . - 0 ID=cds-WP_011742557.1;Parent=gene-YPIP275_RS28290;Dbxref=GenBank:WP_011742557.1;Name=WP_011742557.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042748.5;locus_tag=YPIP275_RS28290;product=DUF6710 family protein;protein_id=WP_011742557.1;transl_table=11 NC_009141.1 RefSeq pseudogene 30713 30892 . + . ID=gene-YPIP275_RS25275;Name=YPIP275_RS25275;end_range=30892,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS25275;old_locus_tag=YpIP275_pIP1202_0049;partial=true;pseudo=true NC_009141.1 Protein Homology CDS 30713 30892 . + 0 ID=cds-YPIP275_RS25275;Parent=gene-YPIP275_RS25275;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=30892,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549890.1;locus_tag=YPIP275_RS25275;partial=true;product=ArsR/SmtB family transcription factor;pseudo=true;transl_table=11 NC_009141.1 RefSeq pseudogene 30957 31271 . + . ID=gene-YPIP275_RS25280;Name=YPIP275_RS25280;end_range=31271,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS25280;old_locus_tag=YpIP275_pIP1202_0050;partial=true;pseudo=true NC_009141.1 Protein Homology CDS 30957 31271 . + 0 ID=cds-YPIP275_RS25280;Parent=gene-YPIP275_RS25280;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=31271,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=YPIP275_RS25280;partial=true;product=IS6-like element IS26 family transposase;pseudo=true;transl_table=11 NC_009141.1 RefSeq gene 31335 32039 . + . ID=gene-YPIP275_RS25285;Name=YPIP275_RS25285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25285;old_locus_tag=YpIP275_pIP1202_0051 NC_009141.1 Protein Homology CDS 31335 32039 . + 0 ID=cds-WP_001067855.1;Parent=gene-YPIP275_RS25285;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=YPIP275_RS25285;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NC_009141.1 RefSeq gene 32222 33037 . - . ID=gene-YPIP275_RS25290;Name=aph(3')-Ia;gbkey=Gene;gene=aph(3')-Ia;gene_biotype=protein_coding;locus_tag=YPIP275_RS25290;old_locus_tag=YpIP275_pIP1202_0052 NC_009141.1 Protein Homology CDS 32222 33037 . - 0 ID=cds-WP_000018326.1;Parent=gene-YPIP275_RS25290;Dbxref=GenBank:WP_000018326.1;Name=WP_000018326.1;gbkey=CDS;gene=aph(3')-Ia;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032492145.1;locus_tag=YPIP275_RS25290;product=aminoglycoside O-phosphotransferase APH(3')-Ia;protein_id=WP_000018326.1;transl_table=11 NC_009141.1 RefSeq gene 33156 33860 . - . ID=gene-YPIP275_RS25295;Name=YPIP275_RS25295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25295;old_locus_tag=YpIP275_pIP1202_0053 NC_009141.1 Protein Homology CDS 33156 33860 . - 0 ID=cds-WP_001067855.1-2;Parent=gene-YPIP275_RS25295;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=YPIP275_RS25295;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NC_009141.1 RefSeq gene 34035 34649 . + . ID=gene-YPIP275_RS25300;Name=YPIP275_RS25300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25300;old_locus_tag=YpIP275_pIP1202_0054 NC_009141.1 Protein Homology CDS 34035 34649 . + 0 ID=cds-WP_000904895.1;Parent=gene-YPIP275_RS25300;Dbxref=GenBank:WP_000904895.1;Name=WP_000904895.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000904895.1;locus_tag=YPIP275_RS25300;product=recombinase family protein;protein_id=WP_000904895.1;transl_table=11 NC_009141.1 RefSeq gene 34715 35518 . + . ID=gene-YPIP275_RS25305;Name=aph(3'')-Ib;gbkey=Gene;gene=aph(3'')-Ib;gene_biotype=protein_coding;locus_tag=YPIP275_RS25305;old_locus_tag=YpIP275_pIP1202_0055 NC_009141.1 Protein Homology CDS 34715 35518 . + 0 ID=cds-WP_001082319.1;Parent=gene-YPIP275_RS25305;Dbxref=GenBank:WP_001082319.1;Name=WP_001082319.1;gbkey=CDS;gene=aph(3'')-Ib;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010890156.1;locus_tag=YPIP275_RS25305;product=aminoglycoside O-phosphotransferase APH(3'')-Ib;protein_id=WP_001082319.1;transl_table=11 NC_009141.1 RefSeq gene 35518 36354 . + . ID=gene-YPIP275_RS25310;Name=YPIP275_RS25310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25310;old_locus_tag=YpIP275_pIP1202_0056 NC_009141.1 Protein Homology CDS 35518 36354 . + 0 ID=cds-WP_000480968.1;Parent=gene-YPIP275_RS25310;Dbxref=GenBank:WP_000480968.1;Name=WP_000480968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480972.1;locus_tag=YPIP275_RS25310;product=aminoglycoside O-phosphotransferase APH(6)-Id;protein_id=WP_000480968.1;transl_table=11 NC_009141.1 RefSeq gene 36535 37326 . + . ID=gene-YPIP275_RS25315;Name=YPIP275_RS25315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25315;old_locus_tag=YpIP275_pIP1202_0057 NC_009141.1 Protein Homology CDS 36535 37326 . + 0 ID=cds-WP_004248792.1;Parent=gene-YPIP275_RS25315;Dbxref=GenBank:WP_004248792.1;Name=WP_004248792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012561121.1;locus_tag=YPIP275_RS25315;product=SprT-like domain-containing protein;protein_id=WP_004248792.1;transl_table=11 NC_009141.1 RefSeq gene 37341 37682 . - . ID=gene-YPIP275_RS25320;Name=ardK;gbkey=Gene;gene=ardK;gene_biotype=protein_coding;locus_tag=YPIP275_RS25320;old_locus_tag=YpIP275_pIP1202_0058 NC_009141.1 Protein Homology CDS 37341 37682 . - 0 ID=cds-WP_000057569.1;Parent=gene-YPIP275_RS25320;Dbxref=GenBank:WP_000057569.1;Name=WP_000057569.1;gbkey=CDS;gene=ardK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057569.1;locus_tag=YPIP275_RS25320;product=antirestriction protein ArdAB regulator ArdK;protein_id=WP_000057569.1;transl_table=11 NC_009141.1 RefSeq gene 38242 38679 . + . ID=gene-YPIP275_RS25325;Name=YPIP275_RS25325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25325;old_locus_tag=YpIP275_pIP1202_0060 NC_009141.1 Protein Homology CDS 38242 38679 . + 0 ID=cds-WP_000359512.1;Parent=gene-YPIP275_RS25325;Dbxref=GenBank:WP_000359512.1;Name=WP_000359512.1;Ontology_term=GO:0006270,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: protein motif:HMM:NF013235.7;locus_tag=YPIP275_RS25325;product=replication initiation protein;protein_id=WP_000359512.1;transl_table=11 NC_009141.1 RefSeq gene 38625 39329 . - . ID=gene-YPIP275_RS25330;Name=YPIP275_RS25330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25330;old_locus_tag=YpIP275_pIP1202_0059 NC_009141.1 Protein Homology CDS 38625 39329 . - 0 ID=cds-WP_001067855.1-3;Parent=gene-YPIP275_RS25330;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=YPIP275_RS25330;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NC_009141.1 RefSeq pseudogene 39390 40154 . + . ID=gene-YPIP275_RS25335;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=pseudogene;locus_tag=YPIP275_RS25335;old_locus_tag=YpIP275_pIP1202_0061;partial=true;pseudo=true;start_range=.,39390 NC_009141.1 Protein Homology CDS 39390 40154 . + 0 ID=cds-YPIP275_RS25335;Parent=gene-YPIP275_RS25335;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006304,GO:0003886;gbkey=CDS;gene=dcm;go_function=DNA (cytosine-5-)-methyltransferase activity|0003886||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288433.1;locus_tag=YPIP275_RS25335;partial=true;product=DNA (cytosine-5-)-methyltransferase;pseudo=true;start_range=.,39390;transl_table=11 NC_009141.1 RefSeq pseudogene 40188 40670 . - . ID=gene-YPIP275_RS25340;Name=YPIP275_RS25340;end_range=40670,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS25340;old_locus_tag=YpIP275_pIP1202_0062;partial=true;pseudo=true NC_009141.1 Protein Homology CDS 40188 40670 . - 0 ID=cds-YPIP275_RS25340;Parent=gene-YPIP275_RS25340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009307,GO:0003677,GO:0009036;end_range=40670,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,type II site-specific deoxyribonuclease activity|0009036||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110242.1;locus_tag=YPIP275_RS25340;partial=true;product=type II restriction endonuclease;pseudo=true;transl_table=11 NC_009141.1 RefSeq gene 40824 41483 . + . ID=gene-YPIP275_RS25345;Name=YPIP275_RS25345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25345;old_locus_tag=YpIP275_pIP1202_0063 NC_009141.1 Protein Homology CDS 40824 41483 . + 0 ID=cds-WP_002210545.1;Parent=gene-YPIP275_RS25345;Dbxref=GenBank:WP_002210545.1;Name=WP_002210545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011152976.1;locus_tag=YPIP275_RS25345;product=type A-1 chloramphenicol O-acetyltransferase;protein_id=WP_002210545.1;transl_table=11 NC_009141.1 RefSeq gene 41684 42061 . - . ID=gene-YPIP275_RS25350;Name=YPIP275_RS25350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25350;old_locus_tag=YpIP275_pIP1202_0064 NC_009141.1 Protein Homology CDS 41684 42061 . - 0 ID=cds-WP_043865431.1;Parent=gene-YPIP275_RS25350;Dbxref=GenBank:WP_043865431.1;Name=WP_043865431.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000656306.1;locus_tag=YPIP275_RS25350;product=GNAT family N-acetyltransferase;protein_id=WP_043865431.1;transl_table=11 NC_009141.1 RefSeq gene 42339 42668 . + . ID=gene-YPIP275_RS25355;Name=YPIP275_RS25355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25355;old_locus_tag=YpIP275_pIP1202_0065 NC_009141.1 Protein Homology CDS 42339 42668 . + 0 ID=cds-WP_002210543.1;Parent=gene-YPIP275_RS25355;Dbxref=GenBank:WP_002210543.1;Name=WP_002210543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210543.1;locus_tag=YPIP275_RS25355;product=hypothetical protein;protein_id=WP_002210543.1;transl_table=11 NC_009141.1 RefSeq pseudogene 42873 43070 . + . ID=gene-YPIP275_RS28310;Name=YPIP275_RS28310;end_range=43070,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28310;partial=true;pseudo=true NC_009141.1 Protein Homology CDS 42873 43070 . + 0 ID=cds-YPIP275_RS28310;Parent=gene-YPIP275_RS28310;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=43070,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=YPIP275_RS28310;partial=true;product=metal/formaldehyde-sensitive transcriptional repressor;pseudo=true;transl_table=11 NC_009141.1 RefSeq gene 43123 43827 . - . ID=gene-YPIP275_RS25360;Name=YPIP275_RS25360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25360;old_locus_tag=YpIP275_pIP1202_0066 NC_009141.1 Protein Homology CDS 43123 43827 . - 0 ID=cds-WP_001067855.1-4;Parent=gene-YPIP275_RS25360;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=YPIP275_RS25360;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NC_009141.1 RefSeq pseudogene 43892 44071 . - . ID=gene-YPIP275_RS25365;Name=YPIP275_RS25365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS25365;old_locus_tag=YpIP275_pIP1202_0067;partial=true;pseudo=true;start_range=.,43892 NC_009141.1 Protein Homology CDS 43892 44071 . - 0 ID=cds-YPIP275_RS25365;Parent=gene-YPIP275_RS25365;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549890.1;locus_tag=YPIP275_RS25365;partial=true;product=ArsR/SmtB family transcription factor;pseudo=true;start_range=.,43892;transl_table=11 NC_009141.1 RefSeq gene 44378 45082 . + . ID=gene-YPIP275_RS25370;Name=YPIP275_RS25370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25370;old_locus_tag=YpIP275_pIP1202_0068 NC_009141.1 Protein Homology CDS 44378 45082 . + 0 ID=cds-WP_001067855.1-5;Parent=gene-YPIP275_RS25370;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=YPIP275_RS25370;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NC_009141.1 RefSeq gene 45088 45228 . + . ID=gene-YPIP275_RS29125;Name=YPIP275_RS29125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29125 NC_009141.1 GeneMarkS-2+ CDS 45088 45228 . + 0 ID=cds-WP_001044210.1;Parent=gene-YPIP275_RS29125;Dbxref=GenBank:WP_001044210.1;Name=WP_001044210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS29125;product=hypothetical protein;protein_id=WP_001044210.1;transl_table=11 NC_009141.1 RefSeq gene 45714 46451 . + . ID=gene-YPIP275_RS25380;Name=YPIP275_RS25380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25380;old_locus_tag=YpIP275_pIP1202_0070 NC_009141.1 Protein Homology CDS 45714 46451 . + 0 ID=cds-WP_001366550.1;Parent=gene-YPIP275_RS25380;Dbxref=GenBank:WP_001366550.1;Name=WP_001366550.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001370723.1;locus_tag=YPIP275_RS25380;product=recombinase family protein;protein_id=WP_001366550.1;transl_table=11 NC_009141.1 RefSeq gene 46448 46672 . + . ID=gene-YPIP275_RS25385;Name=YPIP275_RS25385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25385 NC_009141.1 Protein Homology CDS 46448 46672 . + 0 ID=cds-WP_000743213.1;Parent=gene-YPIP275_RS25385;Dbxref=GenBank:WP_000743213.1;Name=WP_000743213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743213.1;locus_tag=YPIP275_RS25385;product=hypothetical protein;protein_id=WP_000743213.1;transl_table=11 NC_009141.1 RefSeq gene 46883 48376 . + . ID=gene-YPIP275_RS25390;Name=YPIP275_RS25390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25390;old_locus_tag=YpIP275_pIP1202_0071 NC_009141.1 Protein Homology CDS 46883 48376 . + 0 ID=cds-WP_001120888.1;Parent=gene-YPIP275_RS25390;Dbxref=GenBank:WP_001120888.1;Name=WP_001120888.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001120888.1;locus_tag=YPIP275_RS25390;product=IS91-like element ISCR2 family transposase;protein_id=WP_001120888.1;transl_table=11 NC_009141.1 RefSeq pseudogene 48612 48854 . - . ID=gene-YPIP275_RS25395;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=pseudogene;locus_tag=YPIP275_RS25395;old_locus_tag=YpIP275_pIP1202_0072;partial=true;pseudo=true;start_range=.,48612 NC_009141.1 Protein Homology CDS 48612 48854 . - 0 ID=cds-YPIP275_RS25395;Parent=gene-YPIP275_RS25395;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=glmM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008891390.1;locus_tag=YPIP275_RS25395;partial=true;product=phosphoglucosamine mutase;pseudo=true;start_range=.,48612;transl_table=11 NC_009141.1 RefSeq gene 48941 49756 . - . ID=gene-YPIP275_RS25400;Name=sul2;gbkey=Gene;gene=sul2;gene_biotype=protein_coding;locus_tag=YPIP275_RS25400;old_locus_tag=YpIP275_pIP1202_0073 NC_009141.1 Protein Homology CDS 48941 49756 . - 0 ID=cds-WP_001043260.1;Parent=gene-YPIP275_RS25400;Dbxref=GenBank:WP_001043260.1;Name=WP_001043260.1;gbkey=CDS;gene=sul2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043260.1;locus_tag=YPIP275_RS25400;product=sulfonamide-resistant dihydropteroate synthase Sul2;protein_id=WP_001043260.1;transl_table=11 NC_009141.1 RefSeq gene 50063 50374 . + . ID=gene-YPIP275_RS25405;Name=YPIP275_RS25405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25405;old_locus_tag=YpIP275_pIP1202_0074 NC_009141.1 Protein Homology CDS 50063 50374 . + 0 ID=cds-WP_000338945.1;Parent=gene-YPIP275_RS25405;Dbxref=GenBank:WP_000338945.1;Name=WP_000338945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221037.1;locus_tag=YPIP275_RS25405;product=hypothetical protein;protein_id=WP_000338945.1;transl_table=11 NC_009141.1 RefSeq gene 50548 51333 . + . ID=gene-YPIP275_RS25410;Name=YPIP275_RS25410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25410;old_locus_tag=YpIP275_pIP1202_0075 NC_009141.1 Protein Homology CDS 50548 51333 . + 0 ID=cds-WP_001151304.1;Parent=gene-YPIP275_RS25410;Dbxref=GenBank:WP_001151304.1;Name=WP_001151304.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221039.1;locus_tag=YPIP275_RS25410;product=ParA family protein;protein_id=WP_001151304.1;transl_table=11 NC_009141.1 RefSeq gene 51337 52518 . + . ID=gene-YPIP275_RS25415;Name=YPIP275_RS25415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25415;old_locus_tag=YpIP275_pIP1202_0076 NC_009141.1 Protein Homology CDS 51337 52518 . + 0 ID=cds-WP_001207227.1;Parent=gene-YPIP275_RS25415;Dbxref=GenBank:WP_001207227.1;Name=WP_001207227.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221040.1;locus_tag=YPIP275_RS25415;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_001207227.1;transl_table=11 NC_009141.1 RefSeq gene 52567 52839 . + . ID=gene-YPIP275_RS25420;Name=YPIP275_RS25420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25420;old_locus_tag=YpIP275_pIP1202_0077 NC_009141.1 Protein Homology CDS 52567 52839 . + 0 ID=cds-WP_000703827.1;Parent=gene-YPIP275_RS25420;Dbxref=GenBank:WP_000703827.1;Name=WP_000703827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221041.1;locus_tag=YPIP275_RS25420;product=helix-turn-helix domain-containing protein;protein_id=WP_000703827.1;transl_table=11 NC_009141.1 RefSeq gene 52892 53527 . - . ID=gene-YPIP275_RS25425;Name=YPIP275_RS25425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25425;old_locus_tag=YpIP275_pIP1202_0078 NC_009141.1 Protein Homology CDS 52892 53527 . - 0 ID=cds-WP_000074431.1;Parent=gene-YPIP275_RS25425;Dbxref=GenBank:WP_000074431.1;Name=WP_000074431.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221042.1;locus_tag=YPIP275_RS25425;product=N-6 DNA methylase;protein_id=WP_000074431.1;transl_table=11 NC_009141.1 RefSeq gene 53619 53762 . - . ID=gene-YPIP275_RS29130;Name=YPIP275_RS29130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29130 NC_009141.1 Protein Homology CDS 53619 53762 . - 0 ID=cds-WP_000939033.1;Parent=gene-YPIP275_RS29130;Dbxref=GenBank:WP_000939033.1;Name=WP_000939033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221043.1;locus_tag=YPIP275_RS29130;product=hypothetical protein;protein_id=WP_000939033.1;transl_table=11 NC_009141.1 RefSeq gene 54081 54458 . + . ID=gene-YPIP275_RS25430;Name=YPIP275_RS25430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25430;old_locus_tag=YpIP275_pIP1202_0079 NC_009141.1 Protein Homology CDS 54081 54458 . + 0 ID=cds-WP_001125905.1;Parent=gene-YPIP275_RS25430;Dbxref=GenBank:WP_001125905.1;Name=WP_001125905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221044.1;locus_tag=YPIP275_RS25430;product=hypothetical protein;protein_id=WP_001125905.1;transl_table=11 NC_009141.1 RefSeq gene 54451 54732 . + . ID=gene-YPIP275_RS25435;Name=YPIP275_RS25435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25435 NC_009141.1 Protein Homology CDS 54451 54732 . + 0 ID=cds-WP_000044824.1;Parent=gene-YPIP275_RS25435;Dbxref=GenBank:WP_000044824.1;Name=WP_000044824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000044824.1;locus_tag=YPIP275_RS25435;product=hypothetical protein;protein_id=WP_000044824.1;transl_table=11 NC_009141.1 RefSeq gene 54707 55381 . + . ID=gene-YPIP275_RS25440;Name=YPIP275_RS25440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25440;old_locus_tag=YpIP275_pIP1202_0080 NC_009141.1 Protein Homology CDS 54707 55381 . + 0 ID=cds-WP_000344151.1;Parent=gene-YPIP275_RS25440;Dbxref=GenBank:WP_000344151.1;Name=WP_000344151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221046.1;locus_tag=YPIP275_RS25440;product=thymidylate kinase;protein_id=WP_000344151.1;transl_table=11 NC_009141.1 RefSeq gene 55374 55880 . + . ID=gene-YPIP275_RS25445;Name=YPIP275_RS25445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25445;old_locus_tag=YpIP275_pIP1202_0081 NC_009141.1 Protein Homology CDS 55374 55880 . + 0 ID=cds-WP_000566600.1;Parent=gene-YPIP275_RS25445;Dbxref=GenBank:WP_000566600.1;Name=WP_000566600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058947.1;locus_tag=YPIP275_RS25445;product=hypothetical protein;protein_id=WP_000566600.1;transl_table=11 NC_009141.1 RefSeq gene 55886 56197 . + . ID=gene-YPIP275_RS25450;Name=YPIP275_RS25450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25450;old_locus_tag=YpIP275_pIP1202_0082 NC_009141.1 Protein Homology CDS 55886 56197 . + 0 ID=cds-WP_002210541.1;Parent=gene-YPIP275_RS25450;Dbxref=GenBank:WP_002210541.1;Name=WP_002210541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221048.1;locus_tag=YPIP275_RS25450;product=hypothetical protein;protein_id=WP_002210541.1;transl_table=11 NC_009141.1 RefSeq gene 56206 56706 . + . ID=gene-YPIP275_RS25455;Name=YPIP275_RS25455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25455;old_locus_tag=YpIP275_pIP1202_0083 NC_009141.1 Protein Homology CDS 56206 56706 . + 0 ID=cds-WP_000647189.1;Parent=gene-YPIP275_RS25455;Dbxref=GenBank:WP_000647189.1;Name=WP_000647189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647188.1;locus_tag=YPIP275_RS25455;product=hypothetical protein;protein_id=WP_000647189.1;transl_table=11 NC_009141.1 RefSeq gene 56710 58137 . + . ID=gene-YPIP275_RS25460;Name=YPIP275_RS25460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25460;old_locus_tag=YpIP275_pIP1202_0084 NC_009141.1 Protein Homology CDS 56710 58137 . + 0 ID=cds-WP_000936896.1;Parent=gene-YPIP275_RS25460;Dbxref=GenBank:WP_000936896.1;Name=WP_000936896.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936896.1;locus_tag=YPIP275_RS25460;product=DNA cytosine methyltransferase;protein_id=WP_000936896.1;transl_table=11 NC_009141.1 RefSeq gene 58137 58793 . + . ID=gene-YPIP275_RS25465;Name=YPIP275_RS25465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25465;old_locus_tag=YpIP275_pIP1202_0085 NC_009141.1 Protein Homology CDS 58137 58793 . + 0 ID=cds-WP_000268551.1;Parent=gene-YPIP275_RS25465;Dbxref=GenBank:WP_000268551.1;Name=WP_000268551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000268550.1;locus_tag=YPIP275_RS25465;product=hypothetical protein;protein_id=WP_000268551.1;transl_table=11 NC_009141.1 RefSeq gene 58999 59217 . + . ID=gene-YPIP275_RS25470;Name=YPIP275_RS25470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25470;old_locus_tag=YpIP275_pIP1202_0087 NC_009141.1 Protein Homology CDS 58999 59217 . + 0 ID=cds-WP_000362482.1;Parent=gene-YPIP275_RS25470;Dbxref=GenBank:WP_000362482.1;Name=WP_000362482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362482.1;locus_tag=YPIP275_RS25470;product=hypothetical protein;protein_id=WP_000362482.1;transl_table=11 NC_009141.1 RefSeq gene 59311 59928 . + . ID=gene-YPIP275_RS25475;Name=YPIP275_RS25475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25475;old_locus_tag=YpIP275_pIP1202_0088 NC_009141.1 Protein Homology CDS 59311 59928 . + 0 ID=cds-WP_000464631.1;Parent=gene-YPIP275_RS25475;Dbxref=GenBank:WP_000464631.1;Name=WP_000464631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000464631.1;locus_tag=YPIP275_RS25475;product=hypothetical protein;protein_id=WP_000464631.1;transl_table=11 NC_009141.1 RefSeq gene 60161 60439 . + . ID=gene-YPIP275_RS25485;Name=YPIP275_RS25485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25485;old_locus_tag=YpIP275_pIP1202_0089 NC_009141.1 Protein Homology CDS 60161 60439 . + 0 ID=cds-WP_014386427.1;Parent=gene-YPIP275_RS25485;Dbxref=GenBank:WP_014386427.1;Name=WP_014386427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014386427.1;locus_tag=YPIP275_RS25485;product=hypothetical protein;protein_id=WP_014386427.1;transl_table=11 NC_009141.1 RefSeq gene 60531 61019 . - . ID=gene-YPIP275_RS25490;Name=YPIP275_RS25490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25490;old_locus_tag=YpIP275_pIP1202_0090 NC_009141.1 Protein Homology CDS 60531 61019 . - 0 ID=cds-WP_000468105.1;Parent=gene-YPIP275_RS25490;Dbxref=GenBank:WP_000468105.1;Name=WP_000468105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000468105.1;locus_tag=YPIP275_RS25490;product=hypothetical protein;protein_id=WP_000468105.1;transl_table=11 NC_009141.1 RefSeq gene 61034 63226 . - . ID=gene-YPIP275_RS25495;Name=YPIP275_RS25495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25495;old_locus_tag=YpIP275_pIP1202_0091 NC_009141.1 Protein Homology CDS 61034 63226 . - 0 ID=cds-WP_000366822.1;Parent=gene-YPIP275_RS25495;Dbxref=GenBank:WP_000366822.1;Name=WP_000366822.1;Ontology_term=GO:0006265,GO:0003677,GO:0003917;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000366822.1;locus_tag=YPIP275_RS25495;product=DNA topoisomerase III;protein_id=WP_000366822.1;transl_table=11 NC_009141.1 RefSeq gene 63226 63459 . - . ID=gene-YPIP275_RS25500;Name=YPIP275_RS25500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25500 NC_009141.1 Protein Homology CDS 63226 63459 . - 0 ID=cds-WP_001191892.1;Parent=gene-YPIP275_RS25500;Dbxref=GenBank:WP_001191892.1;Name=WP_001191892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845927.1;locus_tag=YPIP275_RS25500;product=hypothetical protein;protein_id=WP_001191892.1;transl_table=11 NC_009141.1 RefSeq gene 63441 64058 . - . ID=gene-YPIP275_RS25505;Name=YPIP275_RS25505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25505;old_locus_tag=YpIP275_pIP1202_0092 NC_009141.1 Protein Homology CDS 63441 64058 . - 0 ID=cds-WP_001249396.1;Parent=gene-YPIP275_RS25505;Dbxref=GenBank:WP_001249396.1;Name=WP_001249396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184413.1;locus_tag=YPIP275_RS25505;product=hypothetical protein;protein_id=WP_001249396.1;transl_table=11 NC_009141.1 RefSeq gene 64226 67204 . + . ID=gene-YPIP275_RS26565;Name=mobH;gbkey=Gene;gene=mobH;gene_biotype=protein_coding;locus_tag=YPIP275_RS26565;old_locus_tag=YpIP275_pIP1202_0093 NC_009141.1 Protein Homology CDS 64226 67204 . + 0 ID=cds-WP_001337757.1;Parent=gene-YPIP275_RS26565;Dbxref=GenBank:WP_001337757.1;Name=WP_001337757.1;gbkey=CDS;gene=mobH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001337757.1;locus_tag=YPIP275_RS26565;product=MobH family relaxase;protein_id=WP_001337757.1;transl_table=11 NC_009141.1 RefSeq gene 67201 69066 . + . ID=gene-YPIP275_RS25515;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=YPIP275_RS25515;old_locus_tag=YpIP275_pIP1202_0094 NC_009141.1 Protein Homology CDS 67201 69066 . + 0 ID=cds-WP_000178856.1;Parent=gene-YPIP275_RS25515;Dbxref=GenBank:WP_000178856.1;Name=WP_000178856.1;Note=Members of this protein family are the putative conjugative coupling factor%2C TraD%2C as the term is used for the SXT and TOL plasmid systems.;Ontology_term=GO:0015074;gbkey=CDS;gene=traD;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178858.1;locus_tag=YPIP275_RS25515;product=conjugative transfer system coupling protein TraD;protein_id=WP_000178856.1;transl_table=11 NC_009141.1 RefSeq gene 69116 69661 . + . ID=gene-YPIP275_RS25520;Name=YPIP275_RS25520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25520;old_locus_tag=YpIP275_pIP1202_0095 NC_009141.1 Protein Homology CDS 69116 69661 . + 0 ID=cds-WP_000228720.1;Parent=gene-YPIP275_RS25520;Dbxref=GenBank:WP_000228720.1;Name=WP_000228720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332868.1;locus_tag=YPIP275_RS25520;product=hypothetical protein;protein_id=WP_000228720.1;transl_table=11 NC_009141.1 RefSeq gene 69618 70247 . + . ID=gene-YPIP275_RS25525;Name=YPIP275_RS25525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25525;old_locus_tag=YpIP275_pIP1202_0096 NC_009141.1 Protein Homology CDS 69618 70247 . + 0 ID=cds-WP_000743450.1;Parent=gene-YPIP275_RS25525;Dbxref=GenBank:WP_000743450.1;Name=WP_000743450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743450.1;locus_tag=YPIP275_RS25525;product=IncC plasmid conjugative DNA transfer DtrJ family protein;protein_id=WP_000743450.1;transl_table=11 NC_009141.1 RefSeq gene 70295 70471 . + . ID=gene-YPIP275_RS29135;Name=YPIP275_RS29135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29135 NC_009141.1 GeneMarkS-2+ CDS 70295 70471 . + 0 ID=cds-WP_169342285.1;Parent=gene-YPIP275_RS29135;Dbxref=GenBank:WP_169342285.1;Name=WP_169342285.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS29135;product=hypothetical protein;protein_id=WP_169342285.1;transl_table=11 NC_009141.1 RefSeq gene 70485 70613 . - . ID=gene-YPIP275_RS29140;Name=YPIP275_RS29140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29140 NC_009141.1 GeneMarkS-2+ CDS 70485 70613 . - 0 ID=cds-WP_366534730.1;Parent=gene-YPIP275_RS29140;Dbxref=GenBank:WP_366534730.1;Name=WP_366534730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS29140;product=hypothetical protein;protein_id=WP_366534730.1;transl_table=11 NC_009141.1 RefSeq gene 70713 71090 . + . ID=gene-YPIP275_RS25535;Name=YPIP275_RS25535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25535;old_locus_tag=YpIP275_pIP1202_0098 NC_009141.1 Protein Homology CDS 70713 71090 . + 0 ID=cds-WP_000869261.1;Parent=gene-YPIP275_RS25535;Dbxref=GenBank:WP_000869261.1;Name=WP_000869261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000869261.1;locus_tag=YPIP275_RS25535;product=hypothetical protein;protein_id=WP_000869261.1;transl_table=11 NC_009141.1 RefSeq gene 71090 71752 . + . ID=gene-YPIP275_RS25540;Name=YPIP275_RS25540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25540;old_locus_tag=YpIP275_pIP1202_0099 NC_009141.1 Protein Homology CDS 71090 71752 . + 0 ID=cds-WP_001231463.1;Parent=gene-YPIP275_RS25540;Dbxref=GenBank:WP_001231463.1;Name=WP_001231463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231465.1;locus_tag=YPIP275_RS25540;product=hypothetical protein;protein_id=WP_001231463.1;transl_table=11 NC_009141.1 RefSeq gene 71933 72076 . + . ID=gene-YPIP275_RS29145;Name=YPIP275_RS29145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29145 NC_009141.1 Protein Homology CDS 71933 72076 . + 0 ID=cds-WP_001275801.1;Parent=gene-YPIP275_RS29145;Dbxref=GenBank:WP_001275801.1;Name=WP_001275801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001275801.1;locus_tag=YPIP275_RS29145;product=hypothetical protein;protein_id=WP_001275801.1;transl_table=11 NC_009141.1 RefSeq gene 72088 72453 . + . ID=gene-YPIP275_RS25545;Name=YPIP275_RS25545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25545;old_locus_tag=YpIP275_pIP1202_0100 NC_009141.1 Protein Homology CDS 72088 72453 . + 0 ID=cds-WP_001052531.1;Parent=gene-YPIP275_RS25545;Dbxref=GenBank:WP_001052531.1;Name=WP_001052531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052531.1;locus_tag=YPIP275_RS25545;product=hypothetical protein;protein_id=WP_001052531.1;transl_table=11 NC_009141.1 RefSeq gene 72598 72879 . + . ID=gene-YPIP275_RS25550;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=YPIP275_RS25550;old_locus_tag=YpIP275_pIP1202_0101 NC_009141.1 Protein Homology CDS 72598 72879 . + 0 ID=cds-WP_000805625.1;Parent=gene-YPIP275_RS25550;Dbxref=GenBank:WP_000805625.1;Name=WP_000805625.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000433889.1;locus_tag=YPIP275_RS25550;product=type IV conjugative transfer system protein TraL;protein_id=WP_000805625.1;transl_table=11 NC_009141.1 RefSeq gene 72876 73502 . + . ID=gene-YPIP275_RS25555;Name=YPIP275_RS25555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25555;old_locus_tag=YpIP275_pIP1202_0102 NC_009141.1 Protein Homology CDS 72876 73502 . + 0 ID=cds-WP_001049716.1;Parent=gene-YPIP275_RS25555;Dbxref=GenBank:WP_001049716.1;Name=WP_001049716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049717.1;locus_tag=YPIP275_RS25555;product=TraE/TraK family type IV conjugative transfer system protein;protein_id=WP_001049716.1;transl_table=11 NC_009141.1 RefSeq gene 73486 74403 . + . ID=gene-YPIP275_RS25560;Name=YPIP275_RS25560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25560;old_locus_tag=YpIP275_pIP1202_0103 NC_009141.1 Protein Homology CDS 73486 74403 . + 0 ID=cds-WP_000794249.1;Parent=gene-YPIP275_RS25560;Dbxref=GenBank:WP_000794249.1;Name=WP_000794249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000794249.1;locus_tag=YPIP275_RS25560;product=TraK domain-containing protein;protein_id=WP_000794249.1;transl_table=11 NC_009141.1 RefSeq gene 74403 75716 . + . ID=gene-YPIP275_RS25565;Name=YPIP275_RS25565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25565;old_locus_tag=YpIP275_pIP1202_0104 NC_009141.1 Protein Homology CDS 74403 75716 . + 0 ID=cds-WP_024131605.1;Parent=gene-YPIP275_RS25565;Dbxref=GenBank:WP_024131605.1;Name=WP_024131605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595749.1;locus_tag=YPIP275_RS25565;product=TraB/VirB10 family protein;protein_id=WP_024131605.1;transl_table=11 NC_009141.1 RefSeq gene 75713 76291 . + . ID=gene-YPIP275_RS25570;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=YPIP275_RS25570;old_locus_tag=YpIP275_pIP1202_0105 NC_009141.1 Protein Homology CDS 75713 76291 . + 0 ID=cds-WP_000793435.1;Parent=gene-YPIP275_RS25570;Dbxref=GenBank:WP_000793435.1;Name=WP_000793435.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845916.1;locus_tag=YPIP275_RS25570;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WP_000793435.1;transl_table=11 NC_009141.1 RefSeq gene 76370 76687 . + . ID=gene-YPIP275_RS25575;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=YPIP275_RS25575;old_locus_tag=YpIP275_pIP1202_0106 NC_009141.1 Protein Homology CDS 76370 76687 . + 0 ID=cds-WP_064754699.1;Parent=gene-YPIP275_RS25575;Dbxref=GenBank:WP_064754699.1;Name=WP_064754699.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017085228.1;locus_tag=YPIP275_RS25575;product=TraA family conjugative transfer protein;protein_id=WP_064754699.1;transl_table=11 NC_009141.1 RefSeq gene 76888 82419 . + . ID=gene-YPIP275_RS25580;Name=YPIP275_RS25580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25580;old_locus_tag=YpIP275_pIP1202_0107 NC_009141.1 Protein Homology CDS 76888 82419 . + 0 ID=cds-WP_000606833.1;Parent=gene-YPIP275_RS25580;Dbxref=GenBank:WP_000606833.1;Name=WP_000606833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606833.1;locus_tag=YPIP275_RS25580;product=Ig-like domain-containing protein;protein_id=WP_000606833.1;transl_table=11 NC_009141.1 RefSeq gene 82568 83275 . + . ID=gene-YPIP275_RS25585;Name=YPIP275_RS25585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25585;old_locus_tag=YpIP275_pIP1202_0108 NC_009141.1 Protein Homology CDS 82568 83275 . + 0 ID=cds-WP_001259347.1;Parent=gene-YPIP275_RS25585;Dbxref=GenBank:WP_001259347.1;Name=WP_001259347.1;Ontology_term=GO:0003756;gbkey=CDS;go_function=protein disulfide isomerase activity|0003756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001259344.1;locus_tag=YPIP275_RS25585;product=DsbC family protein;protein_id=WP_001259347.1;transl_table=11 NC_009141.1 RefSeq gene 83272 85719 . + . ID=gene-YPIP275_RS25590;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=YPIP275_RS25590;old_locus_tag=YpIP275_pIP1202_0109 NC_009141.1 Protein Homology CDS 83272 85719 . + 0 ID=cds-WP_000637386.1;Parent=gene-YPIP275_RS25590;Dbxref=GenBank:WP_000637386.1;Name=WP_000637386.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000637386.1;locus_tag=YPIP275_RS25590;product=type IV secretion system protein TraC;protein_id=WP_000637386.1;transl_table=11 NC_009141.1 RefSeq gene 85734 86051 . + . ID=gene-YPIP275_RS25595;Name=YPIP275_RS25595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25595;old_locus_tag=YpIP275_pIP1202_0110 NC_009141.1 Protein Homology CDS 85734 86051 . + 0 ID=cds-WP_000351984.1;Parent=gene-YPIP275_RS25595;Dbxref=GenBank:WP_000351984.1;Name=WP_000351984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184404.1;locus_tag=YPIP275_RS25595;product=hypothetical protein;protein_id=WP_000351984.1;transl_table=11 NC_009141.1 RefSeq gene 86048 86578 . + . ID=gene-YPIP275_RS25600;Name=YPIP275_RS25600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25600;old_locus_tag=YpIP275_pIP1202_0111 NC_009141.1 Protein Homology CDS 86048 86578 . + 0 ID=cds-WP_001010738.1;Parent=gene-YPIP275_RS25600;Dbxref=GenBank:WP_001010738.1;Name=WP_001010738.1;Ontology_term=GO:0051604,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001010738.1;locus_tag=YPIP275_RS25600;product=S26 family signal peptidase;protein_id=WP_001010738.1;transl_table=11 NC_009141.1 RefSeq gene 86541 87806 . + . ID=gene-YPIP275_RS25605;Name=YPIP275_RS25605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25605;old_locus_tag=YpIP275_pIP1202_0112 NC_009141.1 Protein Homology CDS 86541 87806 . + 0 ID=cds-WP_000621288.1;Parent=gene-YPIP275_RS25605;Dbxref=GenBank:WP_000621288.1;Name=WP_000621288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001447719.1;locus_tag=YPIP275_RS25605;product=TrbC family F-type conjugative pilus assembly protein;protein_id=WP_000621288.1;transl_table=11 NC_009141.1 RefSeq gene 87803 88474 . + . ID=gene-YPIP275_RS25610;Name=YPIP275_RS25610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25610;old_locus_tag=YpIP275_pIP1202_0113 NC_009141.1 Protein Homology CDS 87803 88474 . + 0 ID=cds-WP_001337754.1;Parent=gene-YPIP275_RS25610;Dbxref=GenBank:WP_001337754.1;Name=WP_001337754.1;Ontology_term=GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001337754.1;locus_tag=YPIP275_RS25610;product=EAL domain-containing protein;protein_id=WP_001337754.1;transl_table=11 NC_009141.1 RefSeq gene 88471 89478 . + . ID=gene-YPIP275_RS25615;Name=YPIP275_RS25615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25615;old_locus_tag=YpIP275_pIP1202_0114 NC_009141.1 Protein Homology CDS 88471 89478 . + 0 ID=cds-WP_000983283.1;Parent=gene-YPIP275_RS25615;Dbxref=GenBank:WP_000983283.1;Name=WP_000983283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000983283.1;locus_tag=YPIP275_RS25615;product=TraU family protein;protein_id=WP_000983283.1;transl_table=11 NC_009141.1 RefSeq gene 89594 92392 . + . ID=gene-YPIP275_RS25620;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=YPIP275_RS25620;old_locus_tag=YpIP275_pIP1202_0115 NC_009141.1 Protein Homology CDS 89594 92392 . + 0 ID=cds-WP_001256487.1;Parent=gene-YPIP275_RS25620;Dbxref=GenBank:WP_001256487.1;Name=WP_001256487.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001256487.1;locus_tag=YPIP275_RS25620;product=conjugal transfer mating pair stabilization protein TraN;protein_id=WP_001256487.1;transl_table=11 NC_009141.1 RefSeq gene 92431 93291 . - . ID=gene-YPIP275_RS25625;Name=YPIP275_RS25625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25625;old_locus_tag=YpIP275_pIP1202_0116 NC_009141.1 Protein Homology CDS 92431 93291 . - 0 ID=cds-WP_000709517.1;Parent=gene-YPIP275_RS25625;Dbxref=GenBank:WP_000709517.1;Name=WP_000709517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000709517.1;locus_tag=YPIP275_RS25625;product=hypothetical protein;protein_id=WP_000709517.1;transl_table=11 NC_009141.1 RefSeq gene 93414 94055 . - . ID=gene-YPIP275_RS25630;Name=YPIP275_RS25630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25630;old_locus_tag=YpIP275_pIP1202_0117 NC_009141.1 Protein Homology CDS 93414 94055 . - 0 ID=cds-WP_000796664.1;Parent=gene-YPIP275_RS25630;Dbxref=GenBank:WP_000796664.1;Name=WP_000796664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000796664.1;locus_tag=YPIP275_RS25630;product=hypothetical protein;protein_id=WP_000796664.1;transl_table=11 NC_009141.1 RefSeq gene 94349 94669 . + . ID=gene-YPIP275_RS25635;Name=YPIP275_RS25635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25635;old_locus_tag=YpIP275_pIP1202_0118 NC_009141.1 Protein Homology CDS 94349 94669 . + 0 ID=cds-WP_000547566.1;Parent=gene-YPIP275_RS25635;Dbxref=GenBank:WP_000547566.1;Name=WP_000547566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547565.1;locus_tag=YPIP275_RS25635;product=hypothetical protein;protein_id=WP_000547566.1;transl_table=11 NC_009141.1 RefSeq gene 94973 95158 . + . ID=gene-YPIP275_RS25640;Name=YPIP275_RS25640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25640;old_locus_tag=YpIP275_pIP1202_0119 NC_009141.1 Protein Homology CDS 94973 95158 . + 0 ID=cds-WP_001186917.1;Parent=gene-YPIP275_RS25640;Dbxref=GenBank:WP_001186917.1;Name=WP_001186917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001186917.1;locus_tag=YPIP275_RS25640;product=hypothetical protein;protein_id=WP_001186917.1;transl_table=11 NC_009141.1 RefSeq gene 95378 96346 . + . ID=gene-YPIP275_RS25645;Name=YPIP275_RS25645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25645;old_locus_tag=YpIP275_pIP1202_0120 NC_009141.1 Protein Homology CDS 95378 96346 . + 0 ID=cds-WP_000085162.1;Parent=gene-YPIP275_RS25645;Dbxref=GenBank:WP_000085162.1;Name=WP_000085162.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000085161.1;locus_tag=YPIP275_RS25645;product=AAA family ATPase;protein_id=WP_000085162.1;transl_table=11 NC_009141.1 RefSeq gene 96357 97265 . + . ID=gene-YPIP275_RS25650;Name=YPIP275_RS25650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25650;old_locus_tag=YpIP275_pIP1202_0121 NC_009141.1 Protein Homology CDS 96357 97265 . + 0 ID=cds-WP_000739139.1;Parent=gene-YPIP275_RS25650;Dbxref=GenBank:WP_000739139.1;Name=WP_000739139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000739140.1;locus_tag=YPIP275_RS25650;product=hypothetical protein;protein_id=WP_000739139.1;transl_table=11 NC_009141.1 RefSeq gene 97326 97856 . + . ID=gene-YPIP275_RS25655;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=YPIP275_RS25655;old_locus_tag=YpIP275_pIP1202_0122 NC_009141.1 Protein Homology CDS 97326 97856 . + 0 ID=cds-WP_000987165.1;Parent=gene-YPIP275_RS25655;Dbxref=GenBank:WP_000987165.1;Name=WP_000987165.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000987165.1;locus_tag=YPIP275_RS25655;product=single-stranded DNA-binding protein;protein_id=WP_000987165.1;transl_table=11 NC_009141.1 RefSeq gene 97951 98940 . + . ID=gene-YPIP275_RS25660;Name=bet;gbkey=Gene;gene=bet;gene_biotype=protein_coding;locus_tag=YPIP275_RS25660;old_locus_tag=YpIP275_pIP1202_0123 NC_009141.1 Protein Homology CDS 97951 98940 . + 0 ID=cds-WP_001282585.1;Parent=gene-YPIP275_RS25660;Dbxref=GenBank:WP_001282585.1;Name=WP_001282585.1;Ontology_term=GO:0006310;gbkey=CDS;gene=bet;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282585.1;locus_tag=YPIP275_RS25660;product=phage recombination protein Bet;protein_id=WP_001282585.1;transl_table=11 NC_009141.1 RefSeq gene 99003 100013 . + . ID=gene-YPIP275_RS25665;Name=YPIP275_RS25665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25665;old_locus_tag=YpIP275_pIP1202_0124 NC_009141.1 Protein Homology CDS 99003 100013 . + 0 ID=cds-WP_000706865.1;Parent=gene-YPIP275_RS25665;Dbxref=GenBank:WP_000706865.1;Name=WP_000706865.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706865.1;locus_tag=YPIP275_RS25665;product=YqaJ viral recombinase family nuclease;protein_id=WP_000706865.1;transl_table=11 NC_009141.1 RefSeq gene 100213 101490 . + . ID=gene-YPIP275_RS25670;Name=YPIP275_RS25670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25670;old_locus_tag=YpIP275_pIP1202_0125 NC_009141.1 Protein Homology CDS 100213 101490 . + 0 ID=cds-WP_000170086.1;Parent=gene-YPIP275_RS25670;Dbxref=GenBank:WP_000170086.1;Name=WP_000170086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170086.1;locus_tag=YPIP275_RS25670;product=DUF3150 domain-containing protein;protein_id=WP_000170086.1;transl_table=11 NC_009141.1 RefSeq gene 101575 103371 . + . ID=gene-YPIP275_RS25675;Name=YPIP275_RS25675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25675;old_locus_tag=YpIP275_pIP1202_0126 NC_009141.1 Protein Homology CDS 101575 103371 . + 0 ID=cds-WP_000039318.1;Parent=gene-YPIP275_RS25675;Dbxref=GenBank:WP_000039318.1;Name=WP_000039318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000039317.1;locus_tag=YPIP275_RS25675;product=VWA domain-containing protein;protein_id=WP_000039318.1;transl_table=11 NC_009141.1 RefSeq gene 103433 103768 . + . ID=gene-YPIP275_RS25680;Name=YPIP275_RS25680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25680;old_locus_tag=YpIP275_pIP1202_0127 NC_009141.1 Protein Homology CDS 103433 103768 . + 0 ID=cds-WP_001071288.1;Parent=gene-YPIP275_RS25680;Dbxref=GenBank:WP_001071288.1;Name=WP_001071288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001447572.1;locus_tag=YPIP275_RS25680;product=hypothetical protein;protein_id=WP_001071288.1;transl_table=11 NC_009141.1 RefSeq gene 104033 104572 . + . ID=gene-YPIP275_RS25685;Name=YPIP275_RS25685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25685;old_locus_tag=YpIP275_pIP1202_0128 NC_009141.1 Protein Homology CDS 104033 104572 . + 0 ID=cds-WP_000018872.1;Parent=gene-YPIP275_RS25685;Dbxref=GenBank:WP_000018872.1;Name=WP_000018872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018871.1;locus_tag=YPIP275_RS25685;product=hypothetical protein;protein_id=WP_000018872.1;transl_table=11 NC_009141.1 RefSeq gene 104663 105163 . + . ID=gene-YPIP275_RS25690;Name=YPIP275_RS25690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25690;old_locus_tag=YpIP275_pIP1202_0129 NC_009141.1 Protein Homology CDS 104663 105163 . + 0 ID=cds-WP_000793769.1;Parent=gene-YPIP275_RS25690;Dbxref=GenBank:WP_000793769.1;Name=WP_000793769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793770.1;locus_tag=YPIP275_RS25690;product=hypothetical protein;protein_id=WP_000793769.1;transl_table=11 NC_009141.1 RefSeq gene 105237 106121 . + . ID=gene-YPIP275_RS25695;Name=YPIP275_RS25695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25695;old_locus_tag=YpIP275_pIP1202_0130 NC_009141.1 Protein Homology CDS 105237 106121 . + 0 ID=cds-WP_000477209.1;Parent=gene-YPIP275_RS25695;Dbxref=GenBank:WP_000477209.1;Name=WP_000477209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000477209.1;locus_tag=YPIP275_RS25695;product=hypothetical protein;protein_id=WP_000477209.1;transl_table=11 NC_009141.1 RefSeq gene 106187 106411 . + . ID=gene-YPIP275_RS25700;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=YPIP275_RS25700;old_locus_tag=YpIP275_pIP1202_0131 NC_009141.1 Protein Homology CDS 106187 106411 . + 0 ID=cds-WP_001102700.1;Parent=gene-YPIP275_RS25700;Dbxref=GenBank:WP_001102700.1;Name=WP_001102700.1;Ontology_term=GO:0051537;gbkey=CDS;gene=yfaE;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001102699.1;locus_tag=YPIP275_RS25700;product=class I ribonucleotide reductase maintenance protein YfaE;protein_id=WP_001102700.1;transl_table=11 NC_009141.1 RefSeq gene 106473 106862 . + . ID=gene-YPIP275_RS25705;Name=YPIP275_RS25705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25705;old_locus_tag=YpIP275_pIP1202_0132 NC_009141.1 Protein Homology CDS 106473 106862 . + 0 ID=cds-WP_000026577.1;Parent=gene-YPIP275_RS25705;Dbxref=GenBank:WP_000026577.1;Name=WP_000026577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141572.1;locus_tag=YPIP275_RS25705;product=hypothetical protein;protein_id=WP_000026577.1;transl_table=11 NC_009141.1 RefSeq gene 107026 107304 . + . ID=gene-YPIP275_RS28325;Name=YPIP275_RS28325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28325 NC_009141.1 GeneMarkS-2+ CDS 107026 107304 . + 0 ID=cds-WP_015059622.1;Parent=gene-YPIP275_RS28325;Dbxref=GenBank:WP_015059622.1;Name=WP_015059622.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS28325;product=hypothetical protein;protein_id=WP_015059622.1;transl_table=11 NC_009141.1 RefSeq gene 107382 107624 . - . ID=gene-YPIP275_RS29150;Name=YPIP275_RS29150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29150 NC_009141.1 Protein Homology CDS 107382 107624 . - 0 ID=cds-WP_002210529.1;Parent=gene-YPIP275_RS29150;Dbxref=GenBank:WP_002210529.1;Name=WP_002210529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210529.1;locus_tag=YPIP275_RS29150;product=hypothetical protein;protein_id=WP_002210529.1;transl_table=11 NC_009141.1 RefSeq gene 107642 107833 . + . ID=gene-YPIP275_RS25720;Name=YPIP275_RS25720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25720;old_locus_tag=YpIP275_pIP1202_0135 NC_009141.1 Protein Homology CDS 107642 107833 . + 0 ID=cds-WP_000651508.1;Parent=gene-YPIP275_RS25720;Dbxref=GenBank:WP_000651508.1;Name=WP_000651508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000651508.1;locus_tag=YPIP275_RS25720;product=hypothetical protein;protein_id=WP_000651508.1;transl_table=11 NC_009141.1 RefSeq gene 107902 108255 . + . ID=gene-YPIP275_RS25725;Name=YPIP275_RS25725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25725;old_locus_tag=YpIP275_pIP1202_0136 NC_009141.1 Protein Homology CDS 107902 108255 . + 0 ID=cds-WP_000994741.1;Parent=gene-YPIP275_RS25725;Dbxref=GenBank:WP_000994741.1;Name=WP_000994741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994741.1;locus_tag=YPIP275_RS25725;product=hypothetical protein;protein_id=WP_000994741.1;transl_table=11 NC_009141.1 RefSeq gene 108447 108791 . + . ID=gene-YPIP275_RS25730;Name=YPIP275_RS25730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25730;old_locus_tag=YpIP275_pIP1202_0137 NC_009141.1 Protein Homology CDS 108447 108791 . + 0 ID=cds-WP_000209093.1;Parent=gene-YPIP275_RS25730;Dbxref=GenBank:WP_000209093.1;Name=WP_000209093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000209075.1;locus_tag=YPIP275_RS25730;product=hypothetical protein;protein_id=WP_000209093.1;transl_table=11 NC_009141.1 RefSeq gene 108869 109171 . + . ID=gene-YPIP275_RS25735;Name=YPIP275_RS25735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25735;old_locus_tag=YpIP275_pIP1202_0138 NC_009141.1 Protein Homology CDS 108869 109171 . + 0 ID=cds-WP_000410925.1;Parent=gene-YPIP275_RS25735;Dbxref=GenBank:WP_000410925.1;Name=WP_000410925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410925.1;locus_tag=YPIP275_RS25735;product=hypothetical protein;protein_id=WP_000410925.1;transl_table=11 NC_009141.1 RefSeq gene 109249 110874 . + . ID=gene-YPIP275_RS25740;Name=YPIP275_RS25740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25740;old_locus_tag=YpIP275_pIP1202_0139 NC_009141.1 Protein Homology CDS 109249 110874 . + 0 ID=cds-WP_000201432.1;Parent=gene-YPIP275_RS25740;Dbxref=GenBank:WP_000201432.1;Name=WP_000201432.1;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000201432.1;locus_tag=YPIP275_RS25740;product=DNA cytosine methyltransferase;protein_id=WP_000201432.1;transl_table=11 NC_009141.1 RefSeq gene 111067 111366 . + . ID=gene-YPIP275_RS25745;Name=YPIP275_RS25745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25745;old_locus_tag=YpIP275_pIP1202_0140 NC_009141.1 Protein Homology CDS 111067 111366 . + 0 ID=cds-WP_002210525.1;Parent=gene-YPIP275_RS25745;Dbxref=GenBank:WP_002210525.1;Name=WP_002210525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210525.1;locus_tag=YPIP275_RS25745;product=hypothetical protein;protein_id=WP_002210525.1;transl_table=11 NC_009141.1 RefSeq gene 111440 111994 . + . ID=gene-YPIP275_RS25750;Name=YPIP275_RS25750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25750;old_locus_tag=YpIP275_pIP1202_0141 NC_009141.1 Protein Homology CDS 111440 111994 . + 0 ID=cds-WP_001093868.1;Parent=gene-YPIP275_RS25750;Dbxref=GenBank:WP_001093868.1;Name=WP_001093868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093867.1;locus_tag=YPIP275_RS25750;product=hypothetical protein;protein_id=WP_001093868.1;transl_table=11 NC_009141.1 RefSeq gene 112227 112613 . + . ID=gene-YPIP275_RS25755;Name=YPIP275_RS25755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25755;old_locus_tag=YpIP275_pIP1202_0142 NC_009141.1 Protein Homology CDS 112227 112613 . + 0 ID=cds-WP_000042274.1;Parent=gene-YPIP275_RS25755;Dbxref=GenBank:WP_000042274.1;Name=WP_000042274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042274.1;locus_tag=YPIP275_RS25755;product=hypothetical protein;protein_id=WP_000042274.1;transl_table=11 NC_009141.1 RefSeq gene 112701 115154 . + . ID=gene-YPIP275_RS25760;Name=YPIP275_RS25760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25760;old_locus_tag=YpIP275_pIP1202_0143 NC_009141.1 Protein Homology CDS 112701 115154 . + 0 ID=cds-WP_001187970.1;Parent=gene-YPIP275_RS25760;Dbxref=GenBank:WP_001187970.1;Name=WP_001187970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001187970.1;locus_tag=YPIP275_RS25760;product=adenine nucleotide alpha hydrolase family protein;protein_id=WP_001187970.1;transl_table=11 NC_009141.1 RefSeq gene 115356 115559 . + . ID=gene-YPIP275_RS25765;Name=YPIP275_RS25765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25765;old_locus_tag=YpIP275_pIP1202_0144 NC_009141.1 Protein Homology CDS 115356 115559 . + 0 ID=cds-WP_000050848.1;Parent=gene-YPIP275_RS25765;Dbxref=GenBank:WP_000050848.1;Name=WP_000050848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000050847.1;locus_tag=YPIP275_RS25765;product=hypothetical protein;protein_id=WP_000050848.1;transl_table=11 NC_009141.1 RefSeq gene 115631 116236 . + . ID=gene-YPIP275_RS25770;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=YPIP275_RS25770;old_locus_tag=YpIP275_pIP1202_0145 NC_009141.1 Protein Homology CDS 115631 116236 . + 0 ID=cds-WP_000071870.1;Parent=gene-YPIP275_RS25770;Dbxref=GenBank:WP_000071870.1;Name=WP_000071870.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000071869.1;locus_tag=YPIP275_RS25770;product=5'-deoxynucleotidase;protein_id=WP_000071870.1;transl_table=11 NC_009141.1 RefSeq gene 116229 116498 . + . ID=gene-YPIP275_RS25775;Name=YPIP275_RS25775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25775;old_locus_tag=YpIP275_pIP1202_0146 NC_009141.1 Protein Homology CDS 116229 116498 . + 0 ID=cds-WP_000184110.1;Parent=gene-YPIP275_RS25775;Dbxref=GenBank:WP_000184110.1;Name=WP_000184110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000184110.1;locus_tag=YPIP275_RS25775;product=hypothetical protein;protein_id=WP_000184110.1;transl_table=11 NC_009141.1 RefSeq gene 116512 116730 . + . ID=gene-YPIP275_RS25780;Name=YPIP275_RS25780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25780;old_locus_tag=YpIP275_pIP1202_0147 NC_009141.1 Protein Homology CDS 116512 116730 . + 0 ID=cds-WP_000260293.1;Parent=gene-YPIP275_RS25780;Dbxref=GenBank:WP_000260293.1;Name=WP_000260293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221052.1;locus_tag=YPIP275_RS25780;product=hypothetical protein;protein_id=WP_000260293.1;transl_table=11 NC_009141.1 RefSeq gene 116804 117361 . + . ID=gene-YPIP275_RS25785;Name=YPIP275_RS25785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25785;old_locus_tag=YpIP275_pIP1202_0148 NC_009141.1 Protein Homology CDS 116804 117361 . + 0 ID=cds-WP_000064431.1;Parent=gene-YPIP275_RS25785;Dbxref=GenBank:WP_000064431.1;Name=WP_000064431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221053.1;locus_tag=YPIP275_RS25785;product=pyruvate dehydrogenase;protein_id=WP_000064431.1;transl_table=11 NC_009141.1 RefSeq gene 117436 118287 . + . ID=gene-YPIP275_RS25790;Name=YPIP275_RS25790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25790;old_locus_tag=YpIP275_pIP1202_0149 NC_009141.1 Protein Homology CDS 117436 118287 . + 0 ID=cds-WP_000595210.1;Parent=gene-YPIP275_RS25790;Dbxref=GenBank:WP_000595210.1;Name=WP_000595210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221054.1;locus_tag=YPIP275_RS25790;product=hypothetical protein;protein_id=WP_000595210.1;transl_table=11 NC_009141.1 RefSeq gene 118745 119131 . + . ID=gene-YPIP275_RS25795;Name=YPIP275_RS25795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25795;old_locus_tag=YpIP275_pIP1202_0150 NC_009141.1 Protein Homology CDS 118745 119131 . + 0 ID=cds-WP_001077335.1;Parent=gene-YPIP275_RS25795;Dbxref=GenBank:WP_001077335.1;Name=WP_001077335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221056.1;locus_tag=YPIP275_RS25795;product=hypothetical protein;protein_id=WP_001077335.1;transl_table=11 NC_009141.1 RefSeq gene 119309 121036 . + . ID=gene-YPIP275_RS25800;Name=YPIP275_RS25800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25800;old_locus_tag=YpIP275_pIP1202_0151 NC_009141.1 Protein Homology CDS 119309 121036 . + 0 ID=cds-WP_000122923.1;Parent=gene-YPIP275_RS25800;Dbxref=GenBank:WP_000122923.1;Name=WP_000122923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221057.1;locus_tag=YPIP275_RS25800;product=DUF7146 domain-containing protein;protein_id=WP_000122923.1;transl_table=11 NC_009141.1 RefSeq gene 121023 121301 . + . ID=gene-YPIP275_RS25805;Name=YPIP275_RS25805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25805;old_locus_tag=YpIP275_pIP1202_0152 NC_009141.1 Protein Homology CDS 121023 121301 . + 0 ID=cds-WP_000268337.1;Parent=gene-YPIP275_RS25805;Dbxref=GenBank:WP_000268337.1;Name=WP_000268337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221058.1;locus_tag=YPIP275_RS25805;product=hypothetical protein;protein_id=WP_000268337.1;transl_table=11 NC_009141.1 RefSeq gene 121374 121613 . + . ID=gene-YPIP275_RS25810;Name=YPIP275_RS25810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25810;old_locus_tag=YpIP275_pIP1202_0153 NC_009141.1 Protein Homology CDS 121374 121613 . + 0 ID=cds-WP_000714162.1;Parent=gene-YPIP275_RS25810;Dbxref=GenBank:WP_000714162.1;Name=WP_000714162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221059.1;locus_tag=YPIP275_RS25810;product=permease;protein_id=WP_000714162.1;transl_table=11 NC_009141.1 RefSeq gene 121623 121739 . + . ID=gene-YPIP275_RS29155;Name=YPIP275_RS29155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29155 NC_009141.1 Protein Homology CDS 121623 121739 . + 0 ID=cds-WP_000338626.1;Parent=gene-YPIP275_RS29155;Dbxref=GenBank:WP_000338626.1;Name=WP_000338626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221060.1;locus_tag=YPIP275_RS29155;product=hypothetical protein;protein_id=WP_000338626.1;transl_table=11 NC_009141.1 RefSeq gene 121860 122234 . + . ID=gene-YPIP275_RS25815;Name=YPIP275_RS25815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25815;old_locus_tag=YpIP275_pIP1202_0154 NC_009141.1 Protein Homology CDS 121860 122234 . + 0 ID=cds-WP_000868821.1;Parent=gene-YPIP275_RS25815;Dbxref=GenBank:WP_000868821.1;Name=WP_000868821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221061.1;locus_tag=YPIP275_RS25815;product=hypothetical protein;protein_id=WP_000868821.1;transl_table=11 NC_009141.1 RefSeq gene 122348 123073 . + . ID=gene-YPIP275_RS25820;Name=YPIP275_RS25820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25820;old_locus_tag=YpIP275_pIP1202_0155 NC_009141.1 Protein Homology CDS 122348 123073 . + 0 ID=cds-WP_000988732.1;Parent=gene-YPIP275_RS25820;Dbxref=GenBank:WP_000988732.1;Name=WP_000988732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221062.1;locus_tag=YPIP275_RS25820;product=hypothetical protein;protein_id=WP_000988732.1;transl_table=11 NC_009141.1 RefSeq pseudogene 123314 126484 . + . ID=gene-YPIP275_RS25825;Name=YPIP275_RS25825;end_range=126484,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS25825;old_locus_tag=YpIP275_pIP1202_0157;partial=true;pseudo=true NC_009141.1 Protein Homology CDS 123314 126484 . + 0 ID=cds-YPIP275_RS25825;Parent=gene-YPIP275_RS25825;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=126484,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221064.1;locus_tag=YPIP275_RS25825;partial=true;product=DUF6531 domain-containing protein;pseudo=true;transl_table=11 NC_009141.1 RefSeq gene 126502 126936 . - . ID=gene-YPIP275_RS25830;Name=merR;gbkey=Gene;gene=merR;gene_biotype=protein_coding;locus_tag=YPIP275_RS25830;old_locus_tag=YpIP275_pIP1202_0156 NC_009141.1 Protein Homology CDS 126502 126936 . - 0 ID=cds-WP_000429836.1;Parent=gene-YPIP275_RS25830;Dbxref=GenBank:WP_000429836.1;Name=WP_000429836.1;Ontology_term=GO:0006355,GO:0046689,GO:0003677,GO:0045340;gbkey=CDS;gene=merR;go_function=DNA binding|0003677||IEA,mercury ion binding|0045340||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to mercury ion|0046689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229638.1;locus_tag=YPIP275_RS25830;product=mercury resistance transcriptional regulator MerR;protein_id=WP_000429836.1;transl_table=11 NC_009141.1 RefSeq gene 127008 127358 . + . ID=gene-YPIP275_RS25835;Name=YPIP275_RS25835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25835;old_locus_tag=YpIP275_pIP1202_0158 NC_009141.1 Protein Homology CDS 127008 127358 . + 0 ID=cds-WP_001294663.1;Parent=gene-YPIP275_RS25835;Dbxref=GenBank:WP_001294663.1;Name=WP_001294663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229639.1;locus_tag=YPIP275_RS25835;product=mercuric transport protein MerT;protein_id=WP_001294663.1;transl_table=11 NC_009141.1 RefSeq gene 127372 127647 . + . ID=gene-YPIP275_RS25840;Name=merP;gbkey=Gene;gene=merP;gene_biotype=protein_coding;locus_tag=YPIP275_RS25840;old_locus_tag=YpIP275_pIP1202_0159 NC_009141.1 Protein Homology CDS 127372 127647 . + 0 ID=cds-WP_000732292.1;Parent=gene-YPIP275_RS25840;Dbxref=GenBank:WP_000732292.1;Name=WP_000732292.1;Ontology_term=GO:0046689,GO:0045340,GO:0042597;gbkey=CDS;gene=merP;go_component=periplasmic space|0042597||IEA;go_function=mercury ion binding|0045340||IEA;go_process=response to mercury ion|0046689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229640.1;locus_tag=YPIP275_RS25840;product=mercury resistance system periplasmic binding protein MerP;protein_id=WP_000732292.1;transl_table=11 NC_009141.1 RefSeq gene 127683 128105 . + . ID=gene-YPIP275_RS25845;Name=merC;gbkey=Gene;gene=merC;gene_biotype=protein_coding;locus_tag=YPIP275_RS25845;old_locus_tag=YpIP275_pIP1202_0160 NC_009141.1 Protein Homology CDS 127683 128105 . + 0 ID=cds-WP_001340589.1;Parent=gene-YPIP275_RS25845;Dbxref=GenBank:WP_001340589.1;Name=WP_001340589.1;gbkey=CDS;gene=merC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239395.1;locus_tag=YPIP275_RS25845;product=organomercurial transporter MerC;protein_id=WP_001340589.1;transl_table=11 NC_009141.1 RefSeq gene 128157 129851 . + . ID=gene-YPIP275_RS25850;Name=merA;gbkey=Gene;gene=merA;gene_biotype=protein_coding;locus_tag=YPIP275_RS25850;old_locus_tag=YpIP275_pIP1202_0161 NC_009141.1 Protein Homology CDS 128157 129851 . + 0 ID=cds-WP_000105636.1;Parent=gene-YPIP275_RS25850;Dbxref=GenBank:WP_000105636.1;Name=WP_000105636.1;Ontology_term=GO:0046689,GO:0050787,GO:0016152,GO:0045340,GO:0050660,GO:0050661;gbkey=CDS;gene=merA;go_function=mercury (II) reductase (NADP+) activity|0016152||IEA,mercury ion binding|0045340||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=response to mercury ion|0046689||IEA,detoxification of mercury ion|0050787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240396.1;locus_tag=YPIP275_RS25850;product=mercury(II) reductase;protein_id=WP_000105636.1;transl_table=11 NC_009141.1 RefSeq gene 129869 130231 . + . ID=gene-YPIP275_RS25855;Name=merD;gbkey=Gene;gene=merD;gene_biotype=protein_coding;locus_tag=YPIP275_RS25855;old_locus_tag=YpIP275_pIP1202_0162 NC_009141.1 Protein Homology CDS 129869 130231 . + 0 ID=cds-WP_001277456.1;Parent=gene-YPIP275_RS25855;Dbxref=GenBank:WP_001277456.1;Name=WP_001277456.1;Ontology_term=GO:0006355,GO:0045892,GO:0046689,GO:0003677;gbkey=CDS;gene=merD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA,response to mercury ion|0046689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229644.1;locus_tag=YPIP275_RS25855;product=mercury resistance co-regulator MerD;protein_id=WP_001277456.1;transl_table=11 NC_009141.1 RefSeq gene 130228 130464 . + . ID=gene-YPIP275_RS25860;Name=merE;gbkey=Gene;gene=merE;gene_biotype=protein_coding;locus_tag=YPIP275_RS25860;old_locus_tag=YpIP275_pIP1202_0163 NC_009141.1 Protein Homology CDS 130228 130464 . + 0 ID=cds-WP_000993386.1;Parent=gene-YPIP275_RS25860;Dbxref=GenBank:WP_000993386.1;Name=WP_000993386.1;gbkey=CDS;gene=merE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229645.1;locus_tag=YPIP275_RS25860;product=broad-spectrum mercury transporter MerE;protein_id=WP_000993386.1;transl_table=11 NC_009141.1 RefSeq pseudogene 130461 131108 . + . ID=gene-YPIP275_RS25865;Name=YPIP275_RS25865;end_range=131108,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS25865;old_locus_tag=YpIP275_pIP1202_0164;partial=true;pseudo=true NC_009141.1 Protein Homology CDS 130461 131108 . + 0 ID=cds-YPIP275_RS25865;Parent=gene-YPIP275_RS25865;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=131108,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004636771.1;locus_tag=YPIP275_RS25865;partial=true;product=EAL domain-containing protein;pseudo=true;transl_table=11 NC_009141.1 RefSeq pseudogene 131103 131198 . - . ID=gene-YPIP275_RS29405;Name=YPIP275_RS29405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29405;partial=true;pseudo=true;start_range=.,131103 NC_009141.1 Protein Homology CDS 131103 131198 . - 0 ID=cds-YPIP275_RS29405;Parent=gene-YPIP275_RS29405;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001375143.1;locus_tag=YPIP275_RS29405;partial=true;product=NTP-binding protein;pseudo=true;start_range=.,131103;transl_table=11 NC_009141.1 RefSeq gene 131243 132922 . + . ID=gene-YPIP275_RS25870;Name=YPIP275_RS25870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25870;old_locus_tag=YpIP275_pIP1202_0165 NC_009141.1 Protein Homology CDS 131243 132922 . + 0 ID=cds-WP_000179844.1;Parent=gene-YPIP275_RS25870;Dbxref=GenBank:WP_000179844.1;Name=WP_000179844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013124600.1;locus_tag=YPIP275_RS25870;product=TnsB C-terminal domain-containing protein;protein_id=WP_000179844.1;transl_table=11 NC_009141.1 RefSeq gene 132925 133785 . + . ID=gene-YPIP275_RS25875;Name=YPIP275_RS25875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25875;old_locus_tag=YpIP275_pIP1202_0166 NC_009141.1 Protein Homology CDS 132925 133785 . + 0 ID=cds-WP_000344784.1;Parent=gene-YPIP275_RS25875;Dbxref=GenBank:WP_000344784.1;Name=WP_000344784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344784.1;locus_tag=YPIP275_RS25875;product=TniB family NTP-binding protein;protein_id=WP_000344784.1;transl_table=11 NC_009141.1 RefSeq gene 133836 135380 . - . ID=gene-YPIP275_RS25880;Name=YPIP275_RS25880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25880;old_locus_tag=YpIP275_pIP1202_0167 NC_009141.1 Protein Homology CDS 133836 135380 . - 0 ID=cds-WP_000287615.1;Parent=gene-YPIP275_RS25880;Dbxref=GenBank:WP_000287615.1;Name=WP_000287615.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000287615.1;locus_tag=YPIP275_RS25880;product=IS3 family transposase;protein_id=WP_000287615.1;transl_table=11 NC_009141.1 RefSeq pseudogene 135503 136267 . + . ID=gene-YPIP275_RS25885;Name=istA;end_range=136267,.;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=YPIP275_RS25885;old_locus_tag=YpIP275_pIP1202_0168;partial=true;pseudo=true NC_009141.1 Protein Homology CDS 135503 136267 . + 0 ID=cds-YPIP275_RS25885;Parent=gene-YPIP275_RS25885;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=136267,.;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001324342.1;locus_tag=YPIP275_RS25885;partial=true;product=IS21-like element IS1326 family transposase;pseudo=true;transl_table=11 NC_009141.1 RefSeq gene 136329 137033 . + . ID=gene-YPIP275_RS25890;Name=YPIP275_RS25890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25890;old_locus_tag=YpIP275_pIP1202_0170 NC_009141.1 Protein Homology CDS 136329 137033 . + 0 ID=cds-WP_001067855.1-6;Parent=gene-YPIP275_RS25890;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=YPIP275_RS25890;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NC_009141.1 RefSeq pseudogene 137087 137740 . - . ID=gene-YPIP275_RS25895;Name=YPIP275_RS25895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS25895;old_locus_tag=YpIP275_pIP1202_0169;partial=true;pseudo=true;start_range=.,137087 NC_009141.1 Protein Homology CDS 137087 137740 . - 0 ID=cds-YPIP275_RS25895;Parent=gene-YPIP275_RS25895;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226817.1;locus_tag=YPIP275_RS25895;partial=true;product=TIM barrel protein;pseudo=true;start_range=.,137087;transl_table=11 NC_009141.1 RefSeq gene 137745 138365 . - . ID=gene-YPIP275_RS25900;Name=otnC;gbkey=Gene;gene=otnC;gene_biotype=protein_coding;locus_tag=YPIP275_RS25900;old_locus_tag=YpIP275_pIP1202_0171 NC_009141.1 Protein Homology CDS 137745 138365 . - 0 ID=cds-WP_002210516.1;Parent=gene-YPIP275_RS25900;Dbxref=GenBank:WP_002210516.1;Name=WP_002210516.1;Ontology_term=GO:0005996,GO:0016829;gbkey=CDS;gene=otnC;go_function=lyase activity|0016829||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226818.1;locus_tag=YPIP275_RS25900;product=3-oxo-tetronate 4-phosphate decarboxylase;protein_id=WP_002210516.1;transl_table=11 NC_009141.1 RefSeq gene 138358 139623 . - . ID=gene-YPIP275_RS25905;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=YPIP275_RS25905;old_locus_tag=YpIP275_pIP1202_0172 NC_009141.1 Protein Homology CDS 138358 139623 . - 0 ID=cds-WP_002210515.1;Parent=gene-YPIP275_RS25905;Dbxref=GenBank:WP_002210515.1;Name=WP_002210515.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226819.1;locus_tag=YPIP275_RS25905;product=3-oxo-tetronate kinase;protein_id=WP_002210515.1;transl_table=11 NC_009141.1 RefSeq gene 139635 140537 . - . ID=gene-YPIP275_RS25910;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=YPIP275_RS25910;old_locus_tag=YpIP275_pIP1202_0173 NC_009141.1 Protein Homology CDS 139635 140537 . - 0 ID=cds-WP_002210514.1;Parent=gene-YPIP275_RS25910;Dbxref=GenBank:WP_002210514.1;Name=WP_002210514.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226820.1;locus_tag=YPIP275_RS25910;product=L-threonate dehydrogenase;protein_id=WP_002210514.1;transl_table=11 NC_009141.1 RefSeq gene 140798 141559 . + . ID=gene-YPIP275_RS25915;Name=YPIP275_RS25915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25915;old_locus_tag=YpIP275_pIP1202_0174 NC_009141.1 Protein Homology CDS 140798 141559 . + 0 ID=cds-WP_002210513.1;Parent=gene-YPIP275_RS25915;Dbxref=GenBank:WP_002210513.1;Name=WP_002210513.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226821.1;locus_tag=YPIP275_RS25915;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_002210513.1;transl_table=11 NC_009141.1 RefSeq gene 141580 142440 . - . ID=gene-YPIP275_RS25920;Name=YPIP275_RS25920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25920;old_locus_tag=YpIP275_pIP1202_0175 NC_009141.1 Protein Homology CDS 141580 142440 . - 0 ID=cds-WP_001620095.1;Parent=gene-YPIP275_RS25920;Dbxref=GenBank:WP_001620095.1;Name=WP_001620095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001620095.1;locus_tag=YPIP275_RS25920;product=broad-spectrum class A beta-lactamase SHV-1;protein_id=WP_001620095.1;transl_table=11 NC_009141.1 RefSeq gene 142738 142998 . + . ID=gene-YPIP275_RS25925;Name=YPIP275_RS25925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25925;old_locus_tag=YpIP275_pIP1202_0176 NC_009141.1 Protein Homology CDS 142738 142998 . + 0 ID=cds-WP_001620096.1;Parent=gene-YPIP275_RS25925;Dbxref=GenBank:WP_001620096.1;Name=WP_001620096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904006.1;locus_tag=YPIP275_RS25925;product=hypothetical protein;protein_id=WP_001620096.1;transl_table=11 NC_009141.1 RefSeq gene 143085 144173 . + . ID=gene-YPIP275_RS25930;Name=YPIP275_RS25930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25930;old_locus_tag=YpIP275_pIP1202_0177 NC_009141.1 Protein Homology CDS 143085 144173 . + 0 ID=cds-WP_001620097.1;Parent=gene-YPIP275_RS25930;Dbxref=GenBank:WP_001620097.1;Name=WP_001620097.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226824.1;locus_tag=YPIP275_RS25930;product=AAA family ATPase;protein_id=WP_001620097.1;transl_table=11 NC_009141.1 RefSeq pseudogene 144204 145091 . - . ID=gene-YPIP275_RS25935;Name=YPIP275_RS25935;end_range=145091,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS25935;old_locus_tag=YpIP275_pIP1202_0178;partial=true;pseudo=true NC_009141.1 Protein Homology CDS 144204 145091 . - 0 ID=cds-YPIP275_RS25935;Parent=gene-YPIP275_RS25935;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008643,GO:0005351,GO:0016020;end_range=145091,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151612.1;locus_tag=YPIP275_RS25935;partial=true;product=oligosaccharide MFS transporter;pseudo=true;transl_table=11 NC_009141.1 RefSeq gene 145146 145850 . + . ID=gene-YPIP275_RS25940;Name=YPIP275_RS25940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25940;old_locus_tag=YpIP275_pIP1202_0179 NC_009141.1 Protein Homology CDS 145146 145850 . + 0 ID=cds-WP_001067855.1-7;Parent=gene-YPIP275_RS25940;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=YPIP275_RS25940;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NC_009141.1 RefSeq pseudogene 145896 146318 . - . ID=gene-YPIP275_RS25945;Name=YPIP275_RS25945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS25945;old_locus_tag=YpIP275_pIP1202_0180;partial=true;pseudo=true;start_range=.,145896 NC_009141.1 Protein Homology CDS 145896 146318 . - 0 ID=cds-YPIP275_RS25945;Parent=gene-YPIP275_RS25945;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238974.1;locus_tag=YPIP275_RS25945;partial=true;product=alpha/beta hydrolase-fold protein;pseudo=true;start_range=.,145896;transl_table=11 NC_009141.1 RefSeq gene 146340 147449 . - . ID=gene-YPIP275_RS25950;Name=YPIP275_RS25950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25950;old_locus_tag=YpIP275_pIP1202_0181 NC_009141.1 Protein Homology CDS 146340 147449 . - 0 ID=cds-WP_000842134.1;Parent=gene-YPIP275_RS25950;Dbxref=GenBank:WP_000842134.1;Name=WP_000842134.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308438.1;locus_tag=YPIP275_RS25950;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_000842134.1;transl_table=11 NC_009141.1 RefSeq gene 147544 148728 . - . ID=gene-YPIP275_RS25955;Name=tet(D);gbkey=Gene;gene=tet(D);gene_biotype=protein_coding;locus_tag=YPIP275_RS25955;old_locus_tag=YpIP275_pIP1202_0182 NC_009141.1 Protein Homology CDS 147544 148728 . - 0 ID=cds-WP_001039466.1;Parent=gene-YPIP275_RS25955;Dbxref=GenBank:WP_001039466.1;Name=WP_001039466.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(D);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001039466.1;locus_tag=YPIP275_RS25955;product=tetracycline efflux MFS transporter Tet(D);protein_id=WP_001039466.1;transl_table=11 NC_009141.1 RefSeq gene 148824 149480 . + . ID=gene-YPIP275_RS25960;Name=tetR(D);gbkey=Gene;gene=tetR(D);gene_biotype=protein_coding;locus_tag=YPIP275_RS25960;old_locus_tag=YpIP275_pIP1202_0183 NC_009141.1 Protein Homology CDS 148824 149480 . + 0 ID=cds-WP_000113282.1;Parent=gene-YPIP275_RS25960;Dbxref=GenBank:WP_000113282.1;Name=WP_000113282.1;gbkey=CDS;gene=tetR(D);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113282.1;locus_tag=YPIP275_RS25960;product=tetracycline resistance transcriptional repressor TetR(D);protein_id=WP_000113282.1;transl_table=11 NC_009141.1 RefSeq gene 149492 150196 . + . ID=gene-YPIP275_RS25965;Name=YPIP275_RS25965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25965;old_locus_tag=YpIP275_pIP1202_0184 NC_009141.1 Protein Homology CDS 149492 150196 . + 0 ID=cds-WP_001067855.1-8;Parent=gene-YPIP275_RS25965;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=YPIP275_RS25965;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NC_009141.1 RefSeq pseudogene 150240 150953 . + . ID=gene-YPIP275_RS25970;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=YPIP275_RS25970;old_locus_tag=YpIP275_pIP1202_0185;partial=true;pseudo=true;start_range=.,150240 NC_009141.1 Protein Homology CDS 150240 150953 . + 0 ID=cds-YPIP275_RS25970;Parent=gene-YPIP275_RS25970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001324342.1;locus_tag=YPIP275_RS25970;partial=true;product=IS21-like element IS1326 family transposase;pseudo=true;start_range=.,150240;transl_table=11 NC_009141.1 RefSeq gene 150940 151725 . + . ID=gene-YPIP275_RS25975;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS25975;old_locus_tag=YpIP275_pIP1202_0186 NC_009141.1 Protein Homology CDS 150940 151725 . + 0 ID=cds-WP_000983249.1;Parent=gene-YPIP275_RS25975;Dbxref=GenBank:WP_000983249.1;Name=WP_000983249.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000983249.1;locus_tag=YPIP275_RS25975;product=IS21-like element IS1326 family helper ATPase IstB;protein_id=WP_000983249.1;transl_table=11 NC_009141.1 RefSeq gene 151901 152401 . - . ID=gene-YPIP275_RS25980;Name=YPIP275_RS25980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25980;old_locus_tag=YpIP275_pIP1202_0187 NC_009141.1 Protein Homology CDS 151901 152401 . - 0 ID=cds-WP_000376623.1;Parent=gene-YPIP275_RS25980;Dbxref=GenBank:WP_000376623.1;Name=WP_000376623.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194535.1;locus_tag=YPIP275_RS25980;product=GNAT family N-acetyltransferase;protein_id=WP_000376623.1;transl_table=11 NC_009141.1 RefSeq gene 152529 153368 . - . ID=gene-YPIP275_RS25985;Name=sul1;gbkey=Gene;gene=sul1;gene_biotype=protein_coding;locus_tag=YPIP275_RS25985;old_locus_tag=YpIP275_pIP1202_0188 NC_009141.1 Protein Homology CDS 152529 153368 . - 0 ID=cds-WP_000259031.1;Parent=gene-YPIP275_RS25985;Dbxref=GenBank:WP_000259031.1;Name=WP_000259031.1;gbkey=CDS;gene=sul1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000259031.1;locus_tag=YPIP275_RS25985;product=sulfonamide-resistant dihydropteroate synthase Sul1;protein_id=WP_000259031.1;transl_table=11 NC_009141.1 RefSeq gene 153362 153709 . - . ID=gene-YPIP275_RS25990;Name=YPIP275_RS25990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25990;old_locus_tag=YpIP275_pIP1202_0189 NC_009141.1 Protein Homology CDS 153362 153709 . - 0 ID=cds-WP_000679427.1;Parent=gene-YPIP275_RS25990;Dbxref=GenBank:WP_000679427.1;Name=WP_000679427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000679427.1;locus_tag=YPIP275_RS25990;product=quaternary ammonium compound efflux SMR transporter QacE delta 1;protein_id=WP_000679427.1;transl_table=11 NC_009141.1 RefSeq gene 153873 154664 . - . ID=gene-YPIP275_RS25995;Name=YPIP275_RS25995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25995;old_locus_tag=YpIP275_pIP1202_0190 NC_009141.1 Protein Homology CDS 153873 154664 . - 0 ID=cds-WP_001261740.1;Parent=gene-YPIP275_RS25995;Dbxref=GenBank:WP_001261740.1;Name=WP_001261740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014325834.1;locus_tag=YPIP275_RS25995;product=ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2;protein_id=WP_001261740.1;transl_table=11 NC_009141.1 RefSeq gene 154813 155826 . + . ID=gene-YPIP275_RS26000;Name=intI1;gbkey=Gene;gene=intI1;gene_biotype=protein_coding;locus_tag=YPIP275_RS26000;old_locus_tag=YpIP275_pIP1202_0191 NC_009141.1 Protein Homology CDS 154813 155826 . + 0 ID=cds-WP_000845048.1;Parent=gene-YPIP275_RS26000;Dbxref=GenBank:WP_000845048.1;Name=WP_000845048.1;gbkey=CDS;gene=intI1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221021.1;locus_tag=YPIP275_RS26000;product=class 1 integron integrase IntI1;protein_id=WP_000845048.1;transl_table=11 NC_009141.1 RefSeq pseudogene 156029 156379 . + . ID=gene-YPIP275_RS26005;Name=YPIP275_RS26005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS26005;partial=true;pseudo=true;start_range=.,156029 NC_009141.1 Protein Homology CDS 156029 156379 . + 0 ID=cds-YPIP275_RS26005;Parent=gene-YPIP275_RS26005;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240397.1;locus_tag=YPIP275_RS26005;partial=true;product=DUF3330 domain-containing protein;pseudo=true;start_range=.,156029;transl_table=11 NC_009141.1 RefSeq pseudogene 156510 156629 . + . ID=gene-YPIP275_RS29160;Name=YPIP275_RS29160;end_range=156629,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29160;partial=true;pseudo=true NC_009141.1 Protein Homology CDS 156510 156629 . + 0 ID=cds-YPIP275_RS29160;Parent=gene-YPIP275_RS29160;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=156629,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236504.1;locus_tag=YPIP275_RS29160;partial=true;product=recombinase family protein;pseudo=true;transl_table=11 NC_009141.1 RefSeq gene 156676 157380 . - . ID=gene-YPIP275_RS26010;Name=YPIP275_RS26010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26010;old_locus_tag=YpIP275_pIP1202_0193 NC_009141.1 Protein Homology CDS 156676 157380 . - 0 ID=cds-WP_001067855.1-9;Parent=gene-YPIP275_RS26010;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=YPIP275_RS26010;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NC_009141.1 RefSeq pseudogene 157445 157600 . + . ID=gene-YPIP275_RS28360;Name=YPIP275_RS28360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28360;old_locus_tag=YpIP275_pIP1202_0194;partial=true;pseudo=true;start_range=.,157445 NC_009141.1 Protein Homology CDS 157445 157600 . + 0 ID=cds-YPIP275_RS28360;Parent=gene-YPIP275_RS28360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147566.1;locus_tag=YPIP275_RS28360;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,157445;transl_table=11 NC_009141.1 RefSeq gene 157603 160569 . + . ID=gene-YPIP275_RS26015;Name=YPIP275_RS26015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26015;old_locus_tag=YpIP275_pIP1202_0195 NC_009141.1 Protein Homology CDS 157603 160569 . + 0 ID=cds-WP_001138064.1;Parent=gene-YPIP275_RS26015;Dbxref=GenBank:WP_001138064.1;Name=WP_001138064.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138064.1;locus_tag=YPIP275_RS26015;product=Tn3-like element TnAs3 family transposase;protein_id=WP_001138064.1;transl_table=11 NC_009141.1 RefSeq pseudogene 160603 161607 . + . ID=gene-YPIP275_RS26020;Name=YPIP275_RS26020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS26020;old_locus_tag=YpIP275_pIP1202_0196;partial=true;pseudo=true;start_range=.,160603 NC_009141.1 Protein Homology CDS 160603 161607 . + 0 ID=cds-YPIP275_RS26020;Parent=gene-YPIP275_RS26020;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221064.1;locus_tag=YPIP275_RS26020;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,160603;transl_table=11 NC_009141.1 RefSeq gene 161604 161876 . + . ID=gene-YPIP275_RS26025;Name=YPIP275_RS26025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26025;old_locus_tag=YpIP275_pIP1202_0197 NC_009141.1 Protein Homology CDS 161604 161876 . + 0 ID=cds-WP_000787563.1;Parent=gene-YPIP275_RS26025;Dbxref=GenBank:WP_000787563.1;Name=WP_000787563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221065.1;locus_tag=YPIP275_RS26025;product=MafI family immunity protein;protein_id=WP_000787563.1;transl_table=11 NC_009141.1 RefSeq gene 161881 162123 . + . ID=gene-YPIP275_RS26030;Name=YPIP275_RS26030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26030 NC_009141.1 GeneMarkS-2+ CDS 161881 162123 . + 0 ID=cds-WP_000750746.1;Parent=gene-YPIP275_RS26030;Dbxref=GenBank:WP_000750746.1;Name=WP_000750746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS26030;product=hypothetical protein;protein_id=WP_000750746.1;transl_table=11 NC_009141.1 RefSeq gene 162171 162470 . + . ID=gene-YPIP275_RS26035;Name=YPIP275_RS26035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26035;old_locus_tag=YpIP275_pIP1202_0198 NC_009141.1 Protein Homology CDS 162171 162470 . + 0 ID=cds-WP_011872911.1;Parent=gene-YPIP275_RS26035;Dbxref=GenBank:WP_011872911.1;Name=WP_011872911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221066.1;locus_tag=YPIP275_RS26035;product=hypothetical protein;protein_id=WP_011872911.1;transl_table=11 NC_009141.1 RefSeq gene 162637 163089 . + . ID=gene-YPIP275_RS26040;Name=YPIP275_RS26040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26040;old_locus_tag=YpIP275_pIP1202_0199 NC_009141.1 Protein Homology CDS 162637 163089 . + 0 ID=cds-WP_000791469.1;Parent=gene-YPIP275_RS26040;Dbxref=GenBank:WP_000791469.1;Name=WP_000791469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221067.1;locus_tag=YPIP275_RS26040;product=hypothetical protein;protein_id=WP_000791469.1;transl_table=11 NC_009141.1 RefSeq gene 163105 163707 . - . ID=gene-YPIP275_RS26045;Name=YPIP275_RS26045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26045;old_locus_tag=YpIP275_pIP1202_0200 NC_009141.1 Protein Homology CDS 163105 163707 . - 0 ID=cds-WP_000278322.1;Parent=gene-YPIP275_RS26045;Dbxref=GenBank:WP_000278322.1;Name=WP_000278322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221068.1;locus_tag=YPIP275_RS26045;product=hypothetical protein;protein_id=WP_000278322.1;transl_table=11 NC_009141.1 RefSeq gene 163969 164250 . + . ID=gene-YPIP275_RS26050;Name=YPIP275_RS26050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26050;old_locus_tag=YpIP275_pIP1202_0201 NC_009141.1 Protein Homology CDS 163969 164250 . + 0 ID=cds-WP_000575657.1;Parent=gene-YPIP275_RS26050;Dbxref=GenBank:WP_000575657.1;Name=WP_000575657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221069.1;locus_tag=YPIP275_RS26050;product=hypothetical protein;protein_id=WP_000575657.1;transl_table=11 NC_009141.1 RefSeq gene 164549 165085 . + . ID=gene-YPIP275_RS26060;Name=YPIP275_RS26060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26060;old_locus_tag=YpIP275_pIP1202_0203 NC_009141.1 Protein Homology CDS 164549 165085 . + 0 ID=cds-WP_000949433.1;Parent=gene-YPIP275_RS26060;Dbxref=GenBank:WP_000949433.1;Name=WP_000949433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221070.1;locus_tag=YPIP275_RS26060;product=protein-tyrosine phosphatase family protein;protein_id=WP_000949433.1;transl_table=11 NC_009141.1 RefSeq gene 165088 166098 . + . ID=gene-YPIP275_RS26065;Name=YPIP275_RS26065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26065;old_locus_tag=YpIP275_pIP1202_0204 NC_009141.1 Protein Homology CDS 165088 166098 . + 0 ID=cds-WP_000543934.1;Parent=gene-YPIP275_RS26065;Dbxref=GenBank:WP_000543934.1;Name=WP_000543934.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221071.1;locus_tag=YPIP275_RS26065;product=tyrosine-type recombinase/integrase;protein_id=WP_000543934.1;transl_table=11 NC_009141.1 RefSeq gene 166103 166972 . + . ID=gene-YPIP275_RS26070;Name=YPIP275_RS26070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26070;old_locus_tag=YpIP275_pIP1202_0205 NC_009141.1 Protein Homology CDS 166103 166972 . + 0 ID=cds-WP_000997323.1;Parent=gene-YPIP275_RS26070;Dbxref=GenBank:WP_000997323.1;Name=WP_000997323.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221072.1;locus_tag=YPIP275_RS26070;product=3'-5' exonuclease;protein_id=WP_000997323.1;transl_table=11 NC_009141.1 RefSeq gene 166969 167460 . + . ID=gene-YPIP275_RS26075;Name=YPIP275_RS26075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26075;old_locus_tag=YpIP275_pIP1202_0206 NC_009141.1 Protein Homology CDS 166969 167460 . + 0 ID=cds-WP_000139717.1;Parent=gene-YPIP275_RS26075;Dbxref=GenBank:WP_000139717.1;Name=WP_000139717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221073.1;locus_tag=YPIP275_RS26075;product=hypothetical protein;protein_id=WP_000139717.1;transl_table=11 NC_009141.1 RefSeq gene 167787 168662 . + . ID=gene-YPIP275_RS26080;Name=YPIP275_RS26080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26080;old_locus_tag=YpIP275_pIP1202_0207 NC_009141.1 Protein Homology CDS 167787 168662 . + 0 ID=cds-WP_001097010.1;Parent=gene-YPIP275_RS26080;Dbxref=GenBank:WP_001097010.1;Name=WP_001097010.1;Ontology_term=GO:0006274;gbkey=CDS;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001097010.1;locus_tag=YPIP275_RS26080;product=DNA replication terminus site-binding protein;protein_id=WP_001097010.1;transl_table=11 NC_009141.1 RefSeq gene 168824 169864 . + . ID=gene-YPIP275_RS26085;Name=YPIP275_RS26085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26085;old_locus_tag=YpIP275_pIP1202_0208 NC_009141.1 Protein Homology CDS 168824 169864 . + 0 ID=cds-WP_000101568.1;Parent=gene-YPIP275_RS26085;Dbxref=GenBank:WP_000101568.1;Name=WP_000101568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221085.1;locus_tag=YPIP275_RS26085;product=DNA-binding protein;protein_id=WP_000101568.1;transl_table=11 NC_009141.1 RefSeq gene 169939 170142 . + . ID=gene-YPIP275_RS26090;Name=YPIP275_RS26090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26090;old_locus_tag=YpIP275_pIP1202_0209 NC_009141.1 GeneMarkS-2+ CDS 169939 170142 . + 0 ID=cds-WP_235214135.1;Parent=gene-YPIP275_RS26090;Dbxref=GenBank:WP_235214135.1;Name=WP_235214135.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS26090;product=hypothetical protein;protein_id=WP_235214135.1;transl_table=11 NC_009141.1 RefSeq gene 170151 171662 . + . ID=gene-YPIP275_RS26095;Name=YPIP275_RS26095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26095;old_locus_tag=YpIP275_pIP1202_0210 NC_009141.1 Protein Homology CDS 170151 171662 . + 0 ID=cds-WP_000811656.1;Parent=gene-YPIP275_RS26095;Dbxref=GenBank:WP_000811656.1;Name=WP_000811656.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221086.1;locus_tag=YPIP275_RS26095;product=UvrD-helicase domain-containing protein;protein_id=WP_000811656.1;transl_table=11 NC_009141.1 RefSeq gene 171773 172813 . + . ID=gene-YPIP275_RS26100;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=YPIP275_RS26100;old_locus_tag=YpIP275_pIP1202_0211 NC_009141.1 Protein Homology CDS 171773 172813 . + 0 ID=cds-WP_001326396.1;Parent=gene-YPIP275_RS26100;Dbxref=GenBank:WP_001326396.1;Name=WP_001326396.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221087.1;locus_tag=YPIP275_RS26100;product=conjugal transfer protein TraF;protein_id=WP_001326396.1;transl_table=11 NC_009141.1 RefSeq gene 172815 174248 . + . ID=gene-YPIP275_RS26105;Name=YPIP275_RS26105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26105;old_locus_tag=YpIP275_pIP1202_0212 NC_009141.1 Protein Homology CDS 172815 174248 . + 0 ID=cds-WP_000256129.1;Parent=gene-YPIP275_RS26105;Dbxref=GenBank:WP_000256129.1;Name=WP_000256129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221088.1;locus_tag=YPIP275_RS26105;product=conjugal transfer protein TraH;protein_id=WP_000256129.1;transl_table=11 NC_009141.1 RefSeq gene 174261 177875 . + . ID=gene-YPIP275_RS26110;Name=YPIP275_RS26110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26110;old_locus_tag=YpIP275_pIP1202_0213 NC_009141.1 Protein Homology CDS 174261 177875 . + 0 ID=cds-WP_000534551.1;Parent=gene-YPIP275_RS26110;Dbxref=GenBank:WP_000534551.1;Name=WP_000534551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221089.1;locus_tag=YPIP275_RS26110;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=WP_000534551.1;transl_table=11 NC_009141.1 RefSeq gene 177913 178275 . - . ID=gene-YPIP275_RS26115;Name=YPIP275_RS26115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26115;old_locus_tag=YpIP275_pIP1202_0214 NC_009141.1 Protein Homology CDS 177913 178275 . - 0 ID=cds-WP_000683483.1;Parent=gene-YPIP275_RS26115;Dbxref=GenBank:WP_000683483.1;Name=WP_000683483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221090.1;locus_tag=YPIP275_RS26115;product=hypothetical protein;protein_id=WP_000683483.1;transl_table=11 NC_009141.1 RefSeq gene 178991 179263 . + . ID=gene-YPIP275_RS26120;Name=YPIP275_RS26120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26120;old_locus_tag=YpIP275_pIP1202_0215 NC_009141.1 Protein Homology CDS 178991 179263 . + 0 ID=cds-WP_000356489.1;Parent=gene-YPIP275_RS26120;Dbxref=GenBank:WP_000356489.1;Name=WP_000356489.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221091.1;locus_tag=YPIP275_RS26120;product=helix-turn-helix domain-containing protein;protein_id=WP_000356489.1;transl_table=11 NC_009141.1 RefSeq gene 179263 179796 . + . ID=gene-YPIP275_RS26125;Name=YPIP275_RS26125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26125;old_locus_tag=YpIP275_pIP1202_0216 NC_009141.1 Protein Homology CDS 179263 179796 . + 0 ID=cds-WP_000790610.1;Parent=gene-YPIP275_RS26125;Dbxref=GenBank:WP_000790610.1;Name=WP_000790610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221092.1;locus_tag=YPIP275_RS26125;product=transglycosylase SLT domain-containing protein;protein_id=WP_000790610.1;transl_table=11 NC_009141.1 RefSeq gene 179807 180415 . + . ID=gene-YPIP275_RS26130;Name=YPIP275_RS26130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26130;old_locus_tag=YpIP275_pIP1202_0217 NC_009141.1 Protein Homology CDS 179807 180415 . + 0 ID=cds-WP_000891157.1;Parent=gene-YPIP275_RS26130;Dbxref=GenBank:WP_000891157.1;Name=WP_000891157.1;Ontology_term=GO:0044780,GO:0045893;gbkey=CDS;go_process=bacterial-type flagellum assembly|0044780||IEA,positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221093.1;locus_tag=YPIP275_RS26130;product=flagellar transcriptional regulator FlhD;protein_id=WP_000891157.1;transl_table=11 NC_009141.1 RefSeq gene 180412 180963 . + . ID=gene-YPIP275_RS26135;Name=YPIP275_RS26135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26135;old_locus_tag=YpIP275_pIP1202_0218 NC_009141.1 Protein Homology CDS 180412 180963 . + 0 ID=cds-WP_001020646.1;Parent=gene-YPIP275_RS26135;Dbxref=GenBank:WP_001020646.1;Name=WP_001020646.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221094.1;locus_tag=YPIP275_RS26135;product=FlhC family transcriptional regulator;protein_id=WP_001020646.1;transl_table=11 NC_009141.1 RefSeq gene 181023 181442 . - . ID=gene-YPIP275_RS26140;Name=YPIP275_RS26140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26140;old_locus_tag=YpIP275_pIP1202_0219 NC_009141.1 Protein Homology CDS 181023 181442 . - 0 ID=cds-WP_000651490.1;Parent=gene-YPIP275_RS26140;Dbxref=GenBank:WP_000651490.1;Name=WP_000651490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221095.1;locus_tag=YPIP275_RS26140;product=H-NS family histone-like protein;protein_id=WP_000651490.1;transl_table=11 NC_009141.1 RefSeq gene 181444 181737 . - . ID=gene-YPIP275_RS26145;Name=YPIP275_RS26145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26145;old_locus_tag=YpIP275_pIP1202_0220 NC_009141.1 Protein Homology CDS 181444 181737 . - 0 ID=cds-WP_000919078.1;Parent=gene-YPIP275_RS26145;Dbxref=GenBank:WP_000919078.1;Name=WP_000919078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221096.1;locus_tag=YPIP275_RS26145;product=hypothetical protein;protein_id=WP_000919078.1;transl_table=11 NC_009141.1 RefSeq gene 181754 182737 . - . ID=gene-YPIP275_RS26150;Name=YPIP275_RS26150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26150;old_locus_tag=YpIP275_pIP1202_0221 NC_009141.1 Protein Homology CDS 181754 182737 . - 0 ID=cds-WP_000077458.1;Parent=gene-YPIP275_RS26150;Dbxref=GenBank:WP_000077458.1;Name=WP_000077458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221097.1;locus_tag=YPIP275_RS26150;product=ParM/StbA family protein;protein_id=WP_000077458.1;transl_table=11 ##sequence-region NZ_AAOS02000101.1 1 768 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000101.1 RefSeq region 1 768 . + . ID=NZ_AAOS02000101.1:1..768;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 ##sequence-region NZ_AAOS02000100.1 1 792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000100.1 RefSeq region 1 792 . + . ID=NZ_AAOS02000100.1:1..792;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000100.1 RefSeq gene 1 177 . + . ID=gene-YPIP275_RS25015;Name=YPIP275_RS25015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25015;old_locus_tag=YPIP275_2784;partial=true;start_range=.,1 NZ_AAOS02000100.1 Protein Homology CDS 1 177 . + 0 ID=cds-WP_037385891.1;Parent=gene-YPIP275_RS25015;Dbxref=GenBank:WP_037385891.1;Name=WP_037385891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309667.1;locus_tag=YPIP275_RS25015;partial=true;product=Ig-like domain-containing protein;protein_id=WP_037385891.1;start_range=.,1;transl_table=11 NZ_AAOS02000100.1 RefSeq gene 193 615 . + . ID=gene-YPIP275_RS25020;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=YPIP275_RS25020;old_locus_tag=YPIP275_2785 NZ_AAOS02000100.1 Protein Homology CDS 193 615 . + 0 ID=cds-WP_000479153.1;Parent=gene-YPIP275_RS25020;Dbxref=GenBank:WP_000479153.1;Name=WP_000479153.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309668.1;locus_tag=YPIP275_RS25020;product=phage tail assembly chaperone G;protein_id=WP_000479153.1;transl_table=11 NZ_AAOS02000100.1 RefSeq gene 642 792 . + . ID=gene-YPIP275_RS25025;Name=YPIP275_RS25025;end_range=792,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25025;old_locus_tag=YPIP275_2786;partial=true NZ_AAOS02000100.1 Protein Homology CDS 642 792 . + 0 ID=cds-WP_252343522.1;Parent=gene-YPIP275_RS25025;Dbxref=GenBank:WP_252343522.1;Name=WP_252343522.1;end_range=792,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309140.2;locus_tag=YPIP275_RS25025;partial=true;product=phage tail assembly protein T;protein_id=WP_252343522.1;transl_table=11 ##sequence-region NZ_AAOS02000099.1 1 809 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000099.1 RefSeq region 1 809 . + . ID=NZ_AAOS02000099.1:1..809;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000099.1 RefSeq gene 263 809 . + . ID=gene-YPIP275_RS25010;Name=YPIP275_RS25010;end_range=809,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25010;old_locus_tag=YPIP275_3074;partial=true NZ_AAOS02000099.1 Protein Homology CDS 263 809 . + 0 ID=cds-WP_002213727.1;Parent=gene-YPIP275_RS25010;Dbxref=GenBank:WP_002213727.1;Name=WP_002213727.1;Ontology_term=GO:0006355;end_range=809,.;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414063.1;locus_tag=YPIP275_RS25010;partial=true;product=AraC family ligand binding domain-containing protein;protein_id=WP_002213727.1;transl_table=11 ##sequence-region NZ_AAOS02000098.1 1 840 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000098.1 RefSeq region 1 840 . + . ID=NZ_AAOS02000098.1:1..840;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000098.1 RefSeq gene 183 840 . + . ID=gene-YPIP275_RS25005;Name=YPIP275_RS25005;end_range=840,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPIP275_RS25005;old_locus_tag=YPIP275_0117;partial=true NZ_AAOS02000098.1 cmsearch rRNA 183 840 . + . ID=rna-YPIP275_RS25005;Parent=gene-YPIP275_RS25005;Dbxref=RFAM:RF00177;end_range=840,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS25005;partial=true;product=16S ribosomal RNA NZ_AAOS02000098.1 cmsearch exon 183 840 . + . ID=exon-YPIP275_RS25005-1;Parent=rna-YPIP275_RS25005;Dbxref=RFAM:RF00177;end_range=840,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS25005;partial=true;product=16S ribosomal RNA ##sequence-region NZ_AAOS02000097.1 1 842 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000097.1 RefSeq region 1 842 . + . ID=NZ_AAOS02000097.1:1..842;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000097.1 RefSeq gene 118 267 . + . ID=gene-YPIP275_RS29400;Name=YPIP275_RS29400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29400 NZ_AAOS02000097.1 Protein Homology CDS 118 267 . + 0 ID=cds-WP_496543863.1;Parent=gene-YPIP275_RS29400;Dbxref=GenBank:WP_496543863.1;Name=WP_496543863.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF057082.1;locus_tag=YPIP275_RS29400;product=hypothetical protein;protein_id=WP_496543863.1;transl_table=11 ##sequence-region NZ_AAOS02000096.1 1 891 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000096.1 RefSeq region 1 891 . + . ID=NZ_AAOS02000096.1:1..891;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000096.1 RefSeq gene 1 176 . + . ID=gene-YPIP275_RS24990;Name=YPIP275_RS24990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24990;partial=true;start_range=.,1 NZ_AAOS02000096.1 Protein Homology CDS 1 176 . + 2 ID=cds-WP_043940386.1;Parent=gene-YPIP275_RS24990;Dbxref=GenBank:WP_043940386.1;Name=WP_043940386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001605275.1;locus_tag=YPIP275_RS24990;partial=true;product=Ig-like domain-containing protein;protein_id=WP_043940386.1;start_range=.,1;transl_table=11 NZ_AAOS02000096.1 RefSeq gene 192 614 . + . ID=gene-YPIP275_RS24995;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=YPIP275_RS24995 NZ_AAOS02000096.1 Protein Homology CDS 192 614 . + 0 ID=cds-WP_000479153.1-2;Parent=gene-YPIP275_RS24995;Dbxref=GenBank:WP_000479153.1;Name=WP_000479153.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309668.1;locus_tag=YPIP275_RS24995;product=phage tail assembly chaperone G;protein_id=WP_000479153.1;transl_table=11 NZ_AAOS02000096.1 RefSeq gene 596 891 . + . ID=gene-YPIP275_RS25000;Name=YPIP275_RS25000;end_range=891,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS25000;partial=true NZ_AAOS02000096.1 Protein Homology CDS 596 891 . + 0 ID=cds-WP_043940389.1;Parent=gene-YPIP275_RS25000;Dbxref=GenBank:WP_043940389.1;Name=WP_043940389.1;end_range=891,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309669.1;locus_tag=YPIP275_RS25000;partial=true;product=phage tail assembly protein T;protein_id=WP_043940389.1;transl_table=11 ##sequence-region NZ_AAOS02000095.1 1 899 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000095.1 RefSeq region 1 899 . + . ID=NZ_AAOS02000095.1:1..899;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000095.1 RefSeq gene 164 899 . + . ID=gene-YPIP275_RS24985;Name=YPIP275_RS24985;end_range=899,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPIP275_RS24985;old_locus_tag=YPIP275_2621;partial=true NZ_AAOS02000095.1 cmsearch rRNA 164 899 . + . ID=rna-YPIP275_RS24985;Parent=gene-YPIP275_RS24985;Dbxref=RFAM:RF00177;end_range=899,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24985;partial=true;product=16S ribosomal RNA NZ_AAOS02000095.1 cmsearch exon 164 899 . + . ID=exon-YPIP275_RS24985-1;Parent=rna-YPIP275_RS24985;Dbxref=RFAM:RF00177;end_range=899,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24985;partial=true;product=16S ribosomal RNA ##sequence-region NZ_AAOS02000094.1 1 920 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000094.1 RefSeq region 1 920 . + . ID=NZ_AAOS02000094.1:1..920;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000094.1 RefSeq pseudogene 1 66 . - . ID=gene-YPIP275_RS29100;Name=YPIP275_RS29100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29100;partial=true;pseudo=true;start_range=.,1 NZ_AAOS02000094.1 Protein Homology CDS 1 66 . - 0 ID=cds-YPIP275_RS29100;Parent=gene-YPIP275_RS29100;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS29100;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_AAOS02000094.1 RefSeq gene 318 776 . - . ID=gene-YPIP275_RS24965;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS24965;old_locus_tag=YPIP275_1600 NZ_AAOS02000094.1 Protein Homology CDS 318 776 . - 0 ID=cds-WP_002213759.1;Parent=gene-YPIP275_RS24965;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS24965;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 ##sequence-region NZ_AAOS02000093.1 1 929 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000093.1 RefSeq region 1 929 . + . ID=NZ_AAOS02000093.1:1..929;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000093.1 RefSeq pseudogene 1 865 . + . ID=gene-YPIP275_RS24955;Name=YPIP275_RS24955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS24955;old_locus_tag=YPIP275_3861;partial=true;pseudo=true;start_range=.,1 NZ_AAOS02000093.1 Protein Homology CDS 1 865 . + 2 ID=cds-YPIP275_RS24955;Parent=gene-YPIP275_RS24955;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256701.1;locus_tag=YPIP275_RS24955;partial=true;product=GlcNAc-transferase family protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_AAOS02000092.1 1 935 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000092.1 RefSeq region 1 935 . + . ID=NZ_AAOS02000092.1:1..935;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000092.1 RefSeq gene 1 89 . - . ID=gene-YPIP275_RS29095;Name=YPIP275_RS29095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29095;partial=true;start_range=.,1 NZ_AAOS02000092.1 Protein Homology CDS 1 89 . - 0 ID=cds-WP_366534810.1;Parent=gene-YPIP275_RS29095;Dbxref=GenBank:WP_366534810.1;Name=WP_366534810.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213759.1;locus_tag=YPIP275_RS29095;partial=true;product=transposase;protein_id=WP_366534810.1;start_range=.,1;transl_table=11 NZ_AAOS02000092.1 RefSeq gene 341 799 . - . ID=gene-YPIP275_RS24935;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS24935 NZ_AAOS02000092.1 Protein Homology CDS 341 799 . - 0 ID=cds-WP_002213775.1;Parent=gene-YPIP275_RS24935;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS24935;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 ##sequence-region NZ_AAOS02000091.1 1 952 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000091.1 RefSeq region 1 952 . + . ID=NZ_AAOS02000091.1:1..952;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000091.1 RefSeq gene 1 176 . + . ID=gene-YPIP275_RS24910;Name=YPIP275_RS24910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24910;old_locus_tag=YPIP275_4981;partial=true;start_range=.,1 NZ_AAOS02000091.1 Protein Homology CDS 1 176 . + 2 ID=cds-WP_043940386.1-2;Parent=gene-YPIP275_RS24910;Dbxref=GenBank:WP_043940386.1;Name=WP_043940386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001605275.1;locus_tag=YPIP275_RS24910;partial=true;product=Ig-like domain-containing protein;protein_id=WP_043940386.1;start_range=.,1;transl_table=11 NZ_AAOS02000091.1 RefSeq gene 192 614 . + . ID=gene-YPIP275_RS24915;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=YPIP275_RS24915;old_locus_tag=YPIP275_4982 NZ_AAOS02000091.1 Protein Homology CDS 192 614 . + 0 ID=cds-WP_000479153.1-3;Parent=gene-YPIP275_RS24915;Dbxref=GenBank:WP_000479153.1;Name=WP_000479153.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309668.1;locus_tag=YPIP275_RS24915;product=phage tail assembly chaperone G;protein_id=WP_000479153.1;transl_table=11 NZ_AAOS02000091.1 RefSeq pseudogene 596 952 . + . ID=gene-YPIP275_RS24920;Name=YPIP275_RS24920;end_range=952,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS24920;old_locus_tag=YPIP275_4983;partial=true;pseudo=true NZ_AAOS02000091.1 Protein Homology CDS 596 952 . + 0 ID=cds-YPIP275_RS24920;Parent=gene-YPIP275_RS24920;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=952,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309669.1;locus_tag=YPIP275_RS24920;partial=true;product=phage tail assembly protein T;pseudo=true;transl_table=11 ##sequence-region NZ_AAOS02000090.1 1 959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000090.1 RefSeq region 1 959 . + . ID=NZ_AAOS02000090.1:1..959;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000090.1 RefSeq pseudogene 1 139 . + . ID=gene-YPIP275_RS29330;Name=YPIP275_RS29330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29330;partial=true;pseudo=true;start_range=.,1 NZ_AAOS02000090.1 Protein Homology CDS 1 139 . + 1 ID=cds-YPIP275_RS29330;Parent=gene-YPIP275_RS29330;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000255944.1;locus_tag=YPIP275_RS29330;partial=true;product=IS21 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_AAOS02000090.1 RefSeq pseudogene 136 917 . + . ID=gene-YPIP275_RS24905;Name=istB;gbkey=Gene;gene=istB;gene_biotype=pseudogene;locus_tag=YPIP275_RS24905;old_locus_tag=YPIP275_4984;pseudo=true NZ_AAOS02000090.1 Protein Homology CDS 136 917 . + 0 ID=cds-YPIP275_RS24905;Parent=gene-YPIP275_RS24905;Note=frameshifted;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS24905;product=IS21-like element IS100kyp family helper ATPase IstB;pseudo=true;transl_table=11 ##sequence-region NZ_AAOS02000089.1 1 960 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000089.1 RefSeq region 1 960 . + . ID=NZ_AAOS02000089.1:1..960;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000089.1 RefSeq gene 1 257 . - . ID=gene-YPIP275_RS24890;Name=YPIP275_RS24890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24890;old_locus_tag=YPIP275_0468;partial=true;start_range=.,1 NZ_AAOS02000089.1 Protein Homology CDS 1 257 . - 0 ID=cds-WP_043940385.1;Parent=gene-YPIP275_RS24890;Dbxref=GenBank:WP_043940385.1;Name=WP_043940385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228401.1;locus_tag=YPIP275_RS24890;partial=true;product=DNA replication initiation factor;protein_id=WP_043940385.1;start_range=.,1;transl_table=11 NZ_AAOS02000089.1 RefSeq gene 445 903 . - . ID=gene-YPIP275_RS24895;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS24895;old_locus_tag=YPIP275_0469 NZ_AAOS02000089.1 Protein Homology CDS 445 903 . - 0 ID=cds-WP_002213775.1-2;Parent=gene-YPIP275_RS24895;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS24895;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 ##sequence-region NZ_AAOS02000088.1 1 965 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000088.1 RefSeq region 1 965 . + . ID=NZ_AAOS02000088.1:1..965;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000088.1 RefSeq pseudogene 1 158 . + . ID=gene-YPIP275_RS24880;Name=YPIP275_RS24880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS24880;old_locus_tag=YPIP275_3014;partial=true;pseudo=true;start_range=.,1 NZ_AAOS02000088.1 Protein Homology CDS 1 158 . + 2 ID=cds-YPIP275_RS24880;Parent=gene-YPIP275_RS24880;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS24880;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_AAOS02000088.1 RefSeq pseudogene 379 965 . - . ID=gene-YPIP275_RS24885;Name=yopH;end_range=965,.;gbkey=Gene;gene=yopH;gene_biotype=pseudogene;locus_tag=YPIP275_RS24885;old_locus_tag=YPIP275_3015;partial=true;pseudo=true NZ_AAOS02000088.1 Protein Homology CDS 379 965 . - 2 ID=cds-YPIP275_RS24885;Parent=gene-YPIP275_RS24885;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=965,.;gbkey=CDS;gene=yopH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213278.1;locus_tag=YPIP275_RS24885;partial=true;product=T3SS effector protein-tyrosine-phosphatase YopH;pseudo=true;transl_table=11 ##sequence-region NZ_AAOS02000087.1 1 985 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000087.1 RefSeq region 1 985 . + . ID=NZ_AAOS02000087.1:1..985;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000087.1 RefSeq gene 1 389 . - . ID=gene-YPIP275_RS24865;Name=YPIP275_RS24865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24865;old_locus_tag=YPIP275_0377;partial=true;start_range=.,1 NZ_AAOS02000087.1 Protein Homology CDS 1 389 . - 0 ID=cds-WP_002213570.1;Parent=gene-YPIP275_RS24865;Dbxref=GenBank:WP_002213570.1;Name=WP_002213570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309669.1;locus_tag=YPIP275_RS24865;partial=true;product=phage tail assembly protein T;protein_id=WP_002213570.1;start_range=.,1;transl_table=11 NZ_AAOS02000087.1 RefSeq gene 371 793 . - . ID=gene-YPIP275_RS24870;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=YPIP275_RS24870;old_locus_tag=YPIP275_0378 NZ_AAOS02000087.1 Protein Homology CDS 371 793 . - 0 ID=cds-WP_000479153.1-4;Parent=gene-YPIP275_RS24870;Dbxref=GenBank:WP_000479153.1;Name=WP_000479153.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309668.1;locus_tag=YPIP275_RS24870;product=phage tail assembly chaperone G;protein_id=WP_000479153.1;transl_table=11 NZ_AAOS02000087.1 RefSeq gene 809 985 . - . ID=gene-YPIP275_RS24875;Name=YPIP275_RS24875;end_range=985,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24875;old_locus_tag=YPIP275_0379;partial=true NZ_AAOS02000087.1 Protein Homology CDS 809 985 . - 0 ID=cds-WP_037385891.1-2;Parent=gene-YPIP275_RS24875;Dbxref=GenBank:WP_037385891.1;Name=WP_037385891.1;end_range=985,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309667.1;locus_tag=YPIP275_RS24875;partial=true;product=Ig-like domain-containing protein;protein_id=WP_037385891.1;transl_table=11 ##sequence-region NZ_AAOS02000086.1 1 998 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000086.1 RefSeq region 1 998 . + . ID=NZ_AAOS02000086.1:1..998;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000086.1 RefSeq gene 172 954 . - . ID=gene-YPIP275_RS24855;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS24855 NZ_AAOS02000086.1 Protein Homology CDS 172 954 . - 0 ID=cds-WP_001317493.1;Parent=gene-YPIP275_RS24855;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS24855;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 ##sequence-region NZ_AAOS02000085.1 1 1006 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000085.1 RefSeq region 1 1006 . + . ID=NZ_AAOS02000085.1:1..1006;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000085.1 RefSeq gene 1 440 . + . ID=gene-YPIP275_RS24835;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS24835;old_locus_tag=YPIP275_4985;partial=true;start_range=.,1 NZ_AAOS02000085.1 Protein Homology CDS 1 440 . + 2 ID=cds-WP_002213561.1;Parent=gene-YPIP275_RS24835;Dbxref=GenBank:WP_002213561.1;Name=WP_002213561.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003513861.1;locus_tag=YPIP275_RS24835;partial=true;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213561.1;start_range=.,1;transl_table=11 NZ_AAOS02000085.1 RefSeq pseudogene 692 1006 . + . ID=gene-YPIP275_RS24845;Name=tnpA;end_range=1006,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=YPIP275_RS24845;old_locus_tag=YPIP275_4986;partial=true;pseudo=true NZ_AAOS02000085.1 Protein Homology CDS 692 1006 . + 0 ID=cds-YPIP275_RS24845;Parent=gene-YPIP275_RS24845;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1006,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS24845;partial=true;product=IS200/IS605-like element IS1541A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_AAOS02000084.1 1 1012 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000084.1 RefSeq region 1 1012 . + . ID=NZ_AAOS02000084.1:1..1012;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000084.1 RefSeq gene 1 316 . + . ID=gene-YPIP275_RS24815;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS24815;old_locus_tag=YPIP275_0732;partial=true;start_range=.,1 NZ_AAOS02000084.1 Protein Homology CDS 1 316 . + 1 ID=cds-WP_002213558.1;Parent=gene-YPIP275_RS24815;Dbxref=GenBank:WP_002213558.1;Name=WP_002213558.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011066964.1;locus_tag=YPIP275_RS24815;partial=true;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213558.1;start_range=.,1;transl_table=11 NZ_AAOS02000084.1 RefSeq pseudogene 568 1012 . + . ID=gene-YPIP275_RS24825;Name=tnpA;end_range=1012,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=YPIP275_RS24825;old_locus_tag=YPIP275_0733;partial=true;pseudo=true NZ_AAOS02000084.1 Protein Homology CDS 568 1012 . + 0 ID=cds-YPIP275_RS24825;Parent=gene-YPIP275_RS24825;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1012,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213759.1;locus_tag=YPIP275_RS24825;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_AAOS02000083.1 1 1014 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000083.1 RefSeq region 1 1014 . + . ID=NZ_AAOS02000083.1:1..1014;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000083.1 RefSeq pseudogene 1 974 . + . ID=gene-YPIP275_RS24810;Name=yapV;gbkey=Gene;gene=yapV;gene_biotype=pseudogene;locus_tag=YPIP275_RS24810;old_locus_tag=YPIP275_3860;partial=true;pseudo=true;start_range=.,1 NZ_AAOS02000083.1 Protein Homology CDS 1 974 . + 2 ID=cds-YPIP275_RS24810;Parent=gene-YPIP275_RS24810;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=yapV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211399.1;locus_tag=YPIP275_RS24810;partial=true;product=autotransporter adhesin YapV;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_AAOS02000082.1 1 1018 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000082.1 RefSeq region 1 1018 . + . ID=NZ_AAOS02000082.1:1..1018;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000082.1 RefSeq pseudogene 48 844 . - . ID=gene-YPIP275_RS29090;Name=YPIP275_RS29090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29090;partial=true;pseudo=true;start_range=.,48 NZ_AAOS02000082.1 Protein Homology CDS 48 844 . - 0 ID=cds-YPIP275_RS29090;Parent=gene-YPIP275_RS29090;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558235.1;locus_tag=YPIP275_RS29090;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,48;transl_table=11 ##sequence-region NZ_AAOS02000081.1 1 1023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000081.1 RefSeq region 1 1023 . + . ID=NZ_AAOS02000081.1:1..1023;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000081.1 RefSeq gene 160 465 . - . ID=gene-YPIP275_RS24790;Name=YPIP275_RS24790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24790;old_locus_tag=YPIP275_3072 NZ_AAOS02000081.1 Protein Homology CDS 160 465 . - 0 ID=cds-WP_002221218.1;Parent=gene-YPIP275_RS24790;Dbxref=GenBank:WP_002221218.1;Name=WP_002221218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221218.1;locus_tag=YPIP275_RS24790;product=hypothetical protein;protein_id=WP_002221218.1;transl_table=11 NZ_AAOS02000081.1 RefSeq pseudogene 694 1023 . + . ID=gene-YPIP275_RS24795;Name=pst;end_range=1023,.;gbkey=Gene;gene=pst;gene_biotype=pseudogene;locus_tag=YPIP275_RS24795;partial=true;pseudo=true NZ_AAOS02000081.1 Protein Homology CDS 694 1023 . + 0 ID=cds-YPIP275_RS24795;Parent=gene-YPIP275_RS24795;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1023,.;gbkey=CDS;gene=pst;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001285181.1;locus_tag=YPIP275_RS24795;partial=true;product=pesticin;pseudo=true;transl_table=11 ##sequence-region NZ_AAOS02000080.1 1 1024 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000080.1 RefSeq region 1 1024 . + . ID=NZ_AAOS02000080.1:1..1024;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000080.1 RefSeq gene 1 206 . + . ID=gene-YPIP275_RS24780;Name=YPIP275_RS24780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24780;partial=true;start_range=.,1 NZ_AAOS02000080.1 Protein Homology CDS 1 206 . + 2 ID=cds-WP_043940381.1;Parent=gene-YPIP275_RS24780;Dbxref=GenBank:WP_043940381.1;Name=WP_043940381.1;Ontology_term=GO:0051604,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845909.1;locus_tag=YPIP275_RS24780;partial=true;product=S26 family signal peptidase;protein_id=WP_043940381.1;start_range=.,1;transl_table=11 NZ_AAOS02000080.1 RefSeq gene 169 939 . + . ID=gene-YPIP275_RS24785;Name=YPIP275_RS24785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24785;old_locus_tag=YPIP275_3924 NZ_AAOS02000080.1 Protein Homology CDS 169 939 . + 0 ID=cds-WP_366534809.1;Parent=gene-YPIP275_RS24785;Dbxref=GenBank:WP_366534809.1;Name=WP_366534809.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021209.7;locus_tag=YPIP275_RS24785;product=TrbC family F-type conjugative pilus assembly protein;protein_id=WP_366534809.1;transl_table=11 ##sequence-region NZ_AAOS02000079.1 1 1064 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000079.1 RefSeq region 1 1064 . + . ID=NZ_AAOS02000079.1:1..1064;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000079.1 RefSeq pseudogene 28 278 . - . ID=gene-YPIP275_RS28265;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=YPIP275_RS28265;partial=true;pseudo=true;start_range=.,28 NZ_AAOS02000079.1 Protein Homology CDS 28 278 . - 0 ID=cds-YPIP275_RS28265;Parent=gene-YPIP275_RS28265;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003513861.1;locus_tag=YPIP275_RS28265;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,28;transl_table=11 NZ_AAOS02000079.1 RefSeq gene 533 991 . - . ID=gene-YPIP275_RS24770;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS24770;old_locus_tag=YPIP275_3448 NZ_AAOS02000079.1 Protein Homology CDS 533 991 . - 0 ID=cds-WP_002213759.1-2;Parent=gene-YPIP275_RS24770;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS24770;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 ##sequence-region NZ_AAOS02000078.1 1 1076 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000078.1 RefSeq region 1 1076 . + . ID=NZ_AAOS02000078.1:1..1076;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000078.1 RefSeq gene 117 232 . - . ID=gene-YPIP275_RS24755;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=YPIP275_RS24755;old_locus_tag=YPIP275_3862 NZ_AAOS02000078.1 cmsearch rRNA 117 232 . - . ID=rna-YPIP275_RS24755;Parent=gene-YPIP275_RS24755;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24755;product=5S ribosomal RNA NZ_AAOS02000078.1 cmsearch exon 117 232 . - . ID=exon-YPIP275_RS24755-1;Parent=rna-YPIP275_RS24755;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24755;product=5S ribosomal RNA NZ_AAOS02000078.1 RefSeq gene 342 1076 . - . ID=gene-YPIP275_RS24760;Name=YPIP275_RS24760;end_range=1076,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPIP275_RS24760;partial=true NZ_AAOS02000078.1 cmsearch rRNA 342 1076 . - . ID=rna-YPIP275_RS24760;Parent=gene-YPIP275_RS24760;Dbxref=RFAM:RF02541;end_range=1076,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24760;partial=true;product=23S ribosomal RNA NZ_AAOS02000078.1 cmsearch exon 342 1076 . - . ID=exon-YPIP275_RS24760-1;Parent=rna-YPIP275_RS24760;Dbxref=RFAM:RF02541;end_range=1076,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24760;partial=true;product=23S ribosomal RNA ##sequence-region NZ_AAOS02000077.1 1 1082 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000077.1 RefSeq region 1 1082 . + . ID=NZ_AAOS02000077.1:1..1082;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000077.1 RefSeq gene 1 924 . + . ID=gene-YPIP275_RS24745;Name=YPIP275_RS24745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24745;old_locus_tag=YPIP275_0375;partial=true;start_range=.,1 NZ_AAOS02000077.1 Protein Homology CDS 1 924 . + 0 ID=cds-WP_002213530.1;Parent=gene-YPIP275_RS24745;Dbxref=GenBank:WP_002213530.1;Name=WP_002213530.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683668.1;locus_tag=YPIP275_RS24745;partial=true;product=OmpA family protein;protein_id=WP_002213530.1;start_range=.,1;transl_table=11 NZ_AAOS02000077.1 RefSeq pseudogene 928 1082 . + . ID=gene-YPIP275_RS24750;Name=YPIP275_RS24750;end_range=1082,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS24750;old_locus_tag=YPIP275_0376;partial=true;pseudo=true NZ_AAOS02000077.1 Protein Homology CDS 928 1082 . + 0 ID=cds-YPIP275_RS24750;Parent=gene-YPIP275_RS24750;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1082,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226602.1;locus_tag=YPIP275_RS24750;partial=true;product=type VI secretion system tube protein Hcp;pseudo=true;transl_table=11 ##sequence-region NZ_AAOS02000076.1 1 1125 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000076.1 RefSeq region 1 1125 . + . ID=NZ_AAOS02000076.1:1..1125;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000076.1 RefSeq gene 1 437 . + . ID=gene-YPIP275_RS24735;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=YPIP275_RS24735;old_locus_tag=YPIP275_2251;partial=true;start_range=.,1 NZ_AAOS02000076.1 Protein Homology CDS 1 437 . + 2 ID=cds-WP_002213523.1;Parent=gene-YPIP275_RS24735;Dbxref=GenBank:WP_002213523.1;Name=WP_002213523.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213014.1;locus_tag=YPIP275_RS24735;partial=true;product=type VI secretion system contractile sheath small subunit;protein_id=WP_002213523.1;start_range=.,1;transl_table=11 NZ_AAOS02000076.1 RefSeq gene 480 1125 . + . ID=gene-YPIP275_RS24740;Name=YPIP275_RS24740;end_range=1125,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24740;old_locus_tag=YPIP275_2252;partial=true NZ_AAOS02000076.1 Protein Homology CDS 480 1125 . + 0 ID=cds-WP_043940380.1;Parent=gene-YPIP275_RS24740;Dbxref=GenBank:WP_043940380.1;Name=WP_043940380.1;end_range=1125,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104626.1;locus_tag=YPIP275_RS24740;partial=true;product=type VI secretion system contractile sheath domain-containing protein;protein_id=WP_043940380.1;transl_table=11 ##sequence-region NZ_AAOS02000075.1 1 1163 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000075.1 RefSeq region 1 1163 . + . ID=NZ_AAOS02000075.1:1..1163;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000075.1 RefSeq gene 1 153 . - . ID=gene-YPIP275_RS24715;Name=YPIP275_RS24715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24715;old_locus_tag=YPIP275_0392;partial=true;start_range=.,1 NZ_AAOS02000075.1 Protein Homology CDS 1 153 . - 0 ID=cds-WP_043940378.1;Parent=gene-YPIP275_RS24715;Dbxref=GenBank:WP_043940378.1;Name=WP_043940378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309670.1;locus_tag=YPIP275_RS24715;partial=true;product=hypothetical protein;protein_id=WP_043940378.1;start_range=.,1;transl_table=11 NZ_AAOS02000075.1 RefSeq gene 146 580 . - . ID=gene-YPIP275_RS24720;Name=YPIP275_RS24720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24720;old_locus_tag=YPIP275_0393 NZ_AAOS02000075.1 Protein Homology CDS 146 580 . - 0 ID=cds-WP_002213520.1;Parent=gene-YPIP275_RS24720;Dbxref=GenBank:WP_002213520.1;Name=WP_002213520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309669.1;locus_tag=YPIP275_RS24720;product=phage tail assembly protein T;protein_id=WP_002213520.1;transl_table=11 NZ_AAOS02000075.1 RefSeq gene 562 984 . - . ID=gene-YPIP275_RS24725;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=YPIP275_RS24725;old_locus_tag=YPIP275_0394 NZ_AAOS02000075.1 Protein Homology CDS 562 984 . - 0 ID=cds-WP_000479153.1-5;Parent=gene-YPIP275_RS24725;Dbxref=GenBank:WP_000479153.1;Name=WP_000479153.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309668.1;locus_tag=YPIP275_RS24725;product=phage tail assembly chaperone G;protein_id=WP_000479153.1;transl_table=11 NZ_AAOS02000075.1 RefSeq gene 1000 1163 . - . ID=gene-YPIP275_RS24730;Name=YPIP275_RS24730;end_range=1163,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24730;old_locus_tag=YPIP275_0395;partial=true NZ_AAOS02000075.1 Protein Homology CDS 1000 1163 . - 2 ID=cds-WP_043940379.1;Parent=gene-YPIP275_RS24730;Dbxref=GenBank:WP_043940379.1;Name=WP_043940379.1;end_range=1163,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309667.1;locus_tag=YPIP275_RS24730;partial=true;product=Ig-like domain-containing protein;protein_id=WP_043940379.1;transl_table=11 ##sequence-region NZ_AAOS02000074.1 1 1199 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000074.1 RefSeq region 1 1199 . + . ID=NZ_AAOS02000074.1:1..1199;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000074.1 RefSeq pseudogene 252 431 . + . ID=gene-YPIP275_RS24705;Name=YPIP275_RS24705;end_range=431,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS24705;partial=true;pseudo=true NZ_AAOS02000074.1 Protein Homology CDS 252 431 . + 0 ID=cds-YPIP275_RS24705;Parent=gene-YPIP275_RS24705;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=431,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465662.1;locus_tag=YPIP275_RS24705;partial=true;product=ArsR/SmtB family transcription factor;pseudo=true;transl_table=11 NZ_AAOS02000074.1 RefSeq gene 496 1199 . + . ID=gene-YPIP275_RS24710;Name=YPIP275_RS24710;end_range=1199,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24710;partial=true NZ_AAOS02000074.1 Protein Homology CDS 496 1199 . + 0 ID=cds-WP_001067855.1-10;Parent=gene-YPIP275_RS24710;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0004803;end_range=1199,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=YPIP275_RS24710;partial=true;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 ##sequence-region NZ_AAOS02000073.1 1 1277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000073.1 RefSeq region 1 1277 . + . ID=NZ_AAOS02000073.1:1..1277;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000073.1 RefSeq gene 1 681 . - . ID=gene-YPIP275_RS24685;Name=YPIP275_RS24685;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPIP275_RS24685;partial=true;start_range=.,1 NZ_AAOS02000073.1 cmsearch rRNA 1 681 . - . ID=rna-YPIP275_RS24685;Parent=gene-YPIP275_RS24685;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24685;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_AAOS02000073.1 cmsearch exon 1 681 . - . ID=exon-YPIP275_RS24685-1;Parent=rna-YPIP275_RS24685;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24685;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_AAOS02000073.1 RefSeq gene 900 975 . - . ID=gene-YPIP275_RS24690;Name=YPIP275_RS24690;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS24690;old_locus_tag=YPIP275_2655 NZ_AAOS02000073.1 tRNAscan-SE tRNA 900 975 . - . ID=rna-YPIP275_RS24690;Parent=gene-YPIP275_RS24690;anticodon=(pos:complement(940..942));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS24690;product=tRNA-Ala NZ_AAOS02000073.1 tRNAscan-SE exon 900 975 . - . ID=exon-YPIP275_RS24690-1;Parent=rna-YPIP275_RS24690;anticodon=(pos:complement(940..942));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS24690;product=tRNA-Ala NZ_AAOS02000073.1 RefSeq gene 1027 1103 . - . ID=gene-YPIP275_RS24695;Name=YPIP275_RS24695;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS24695;old_locus_tag=YPIP275_2656 NZ_AAOS02000073.1 tRNAscan-SE tRNA 1027 1103 . - . ID=rna-YPIP275_RS24695;Parent=gene-YPIP275_RS24695;anticodon=(pos:complement(1067..1069));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS24695;product=tRNA-Ile NZ_AAOS02000073.1 tRNAscan-SE exon 1027 1103 . - . ID=exon-YPIP275_RS24695-1;Parent=rna-YPIP275_RS24695;anticodon=(pos:complement(1067..1069));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS24695;product=tRNA-Ile NZ_AAOS02000073.1 RefSeq gene 1206 1277 . - . ID=gene-YPIP275_RS24700;Name=YPIP275_RS24700;end_range=1277,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPIP275_RS24700;partial=true NZ_AAOS02000073.1 cmsearch rRNA 1206 1277 . - . ID=rna-YPIP275_RS24700;Parent=gene-YPIP275_RS24700;Dbxref=RFAM:RF00177;end_range=1277,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24700;partial=true;product=16S ribosomal RNA NZ_AAOS02000073.1 cmsearch exon 1206 1277 . - . ID=exon-YPIP275_RS24700-1;Parent=rna-YPIP275_RS24700;Dbxref=RFAM:RF00177;end_range=1277,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24700;partial=true;product=16S ribosomal RNA ##sequence-region NZ_AAOS02000072.1 1 1285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000072.1 RefSeq region 1 1285 . + . ID=NZ_AAOS02000072.1:1..1285;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000072.1 RefSeq gene 36 1244 . - . ID=gene-YPIP275_RS24680;Name=YPIP275_RS24680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24680 NZ_AAOS02000072.1 Protein Homology CDS 36 1244 . - 0 ID=cds-WP_002209743.1;Parent=gene-YPIP275_RS24680;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS24680;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 ##sequence-region NZ_AAOS02000071.1 1 1345 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000071.1 RefSeq region 1 1345 . + . ID=NZ_AAOS02000071.1:1..1345;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000071.1 RefSeq gene 1 1345 . + . ID=gene-YPIP275_RS24675;Name=YPIP275_RS24675;end_range=1345,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24675;partial=true;start_range=.,1 NZ_AAOS02000071.1 Protein Homology CDS 1 1345 . + 1 ID=cds-WP_043940377.1;Parent=gene-YPIP275_RS24675;Dbxref=GenBank:WP_043940377.1;Name=WP_043940377.1;Ontology_term=GO:0030246;end_range=1345,.;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227239.1;locus_tag=YPIP275_RS24675;partial=true;product=RHS repeat domain-containing protein;protein_id=WP_043940377.1;start_range=.,1;transl_table=11 ##sequence-region NZ_AAOS02000070.1 1 1455 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000070.1 RefSeq region 1 1455 . + . ID=NZ_AAOS02000070.1:1..1455;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000070.1 RefSeq gene 111 557 . + . ID=gene-YPIP275_RS24660;Name=YPIP275_RS24660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24660;old_locus_tag=YPIP275_0068 NZ_AAOS02000070.1 Protein Homology CDS 111 557 . + 0 ID=cds-WP_000527682.1;Parent=gene-YPIP275_RS24660;Dbxref=GenBank:WP_000527682.1;Name=WP_000527682.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608238.1;locus_tag=YPIP275_RS24660;product=helix-turn-helix domain-containing protein;protein_id=WP_000527682.1;transl_table=11 NZ_AAOS02000070.1 RefSeq gene 753 950 . - . ID=gene-YPIP275_RS24665;Name=YPIP275_RS24665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24665;old_locus_tag=YPIP275_0070 NZ_AAOS02000070.1 Protein Homology CDS 753 950 . - 0 ID=cds-WP_002211040.1;Parent=gene-YPIP275_RS24665;Dbxref=GenBank:WP_002211040.1;Name=WP_002211040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211040.1;locus_tag=YPIP275_RS24665;product=hypothetical protein;protein_id=WP_002211040.1;transl_table=11 NZ_AAOS02000070.1 RefSeq gene 1147 1401 . - . ID=gene-YPIP275_RS28260;Name=YPIP275_RS28260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28260 NZ_AAOS02000070.1 Protein Homology CDS 1147 1401 . - 0 ID=cds-WP_071600186.1;Parent=gene-YPIP275_RS28260;Dbxref=GenBank:WP_071600186.1;Name=WP_071600186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001419846.1;locus_tag=YPIP275_RS28260;product=hypothetical protein;protein_id=WP_071600186.1;transl_table=11 ##sequence-region NZ_AAOS02000069.1 1 1579 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000069.1 RefSeq region 1 1579 . + . ID=NZ_AAOS02000069.1:1..1579;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000069.1 RefSeq pseudogene 1 465 . + . ID=gene-YPIP275_RS24650;Name=pst;gbkey=Gene;gene=pst;gene_biotype=pseudogene;locus_tag=YPIP275_RS24650;old_locus_tag=YPIP275_4695;partial=true;pseudo=true;start_range=.,1 NZ_AAOS02000069.1 Protein Homology CDS 1 465 . + 0 ID=cds-YPIP275_RS24650;Parent=gene-YPIP275_RS24650;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=pst;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218509.1;locus_tag=YPIP275_RS24650;partial=true;product=pesticin;pseudo=true;start_range=.,1;transl_table=11 NZ_AAOS02000069.1 RefSeq gene 500 895 . - . ID=gene-YPIP275_RS24655;Name=YPIP275_RS24655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24655 NZ_AAOS02000069.1 Protein Homology CDS 500 895 . - 0 ID=cds-WP_223661135.1;Parent=gene-YPIP275_RS24655;Dbxref=GenBank:WP_223661135.1;Name=WP_223661135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001247799.1;locus_tag=YPIP275_RS24655;product=pesticin immunity protein;protein_id=WP_223661135.1;transl_table=11 NZ_AAOS02000069.1 RefSeq gene 1382 1495 . - . ID=gene-YPIP275_RS28255;Name=YPIP275_RS28255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28255 NZ_AAOS02000069.1 Protein Homology CDS 1382 1495 . - 0 ID=cds-WP_002367224.1;Parent=gene-YPIP275_RS28255;Dbxref=GenBank:WP_002367224.1;Name=WP_002367224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761324.1;locus_tag=YPIP275_RS28255;product=hypothetical protein;protein_id=WP_002367224.1;transl_table=11 ##sequence-region NZ_AAOS02000068.1 1 1661 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000068.1 RefSeq region 1 1661 . + . ID=NZ_AAOS02000068.1:1..1661;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000068.1 RefSeq gene 1 512 . - . ID=gene-YPIP275_RS24640;Name=YPIP275_RS24640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24640;old_locus_tag=YPIP275_3863;partial=true;start_range=.,1 NZ_AAOS02000068.1 Protein Homology CDS 1 512 . - 0 ID=cds-WP_002213485.1;Parent=gene-YPIP275_RS24640;Dbxref=GenBank:WP_002213485.1;Name=WP_002213485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=YPIP275_RS24640;partial=true;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_002213485.1;start_range=.,1;transl_table=11 NZ_AAOS02000068.1 RefSeq gene 669 1403 . - . ID=gene-YPIP275_RS24645;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=YPIP275_RS24645;old_locus_tag=YPIP275_3864 NZ_AAOS02000068.1 Protein Homology CDS 669 1403 . - 0 ID=cds-WP_002213487.1;Parent=gene-YPIP275_RS24645;Dbxref=GenBank:WP_002213487.1;Name=WP_002213487.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231042.1;locus_tag=YPIP275_RS24645;product=sulfate transporter CysZ;protein_id=WP_002213487.1;transl_table=11 ##sequence-region NZ_AAOS02000067.1 1 1697 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000067.1 RefSeq region 1 1697 . + . ID=NZ_AAOS02000067.1:1..1697;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000067.1 RefSeq pseudogene 2 210 . + . ID=gene-YPIP275_RS28250;Name=YPIP275_RS28250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28250;pseudo=true NZ_AAOS02000067.1 Protein Homology CDS 2 210 . + 0 ID=cds-YPIP275_RS28250;Parent=gene-YPIP275_RS28250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002414627.1;locus_tag=YPIP275_RS28250;product=DUF2345 domain-containing protein;pseudo=true;transl_table=11 NZ_AAOS02000067.1 RefSeq gene 226 1697 . + . ID=gene-YPIP275_RS24635;Name=YPIP275_RS24635;end_range=1697,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24635;old_locus_tag=YPIP275_4980;partial=true NZ_AAOS02000067.1 Protein Homology CDS 226 1697 . + 0 ID=cds-WP_002213480.1;Parent=gene-YPIP275_RS24635;Dbxref=GenBank:WP_002213480.1;Name=WP_002213480.1;Ontology_term=GO:0008237,GO:0046872;end_range=1697,.;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104590.1;locus_tag=YPIP275_RS24635;partial=true;product=M23 family metallopeptidase;protein_id=WP_002213480.1;transl_table=11 ##sequence-region NZ_AAOS02000066.1 1 1731 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000066.1 RefSeq region 1 1731 . + . ID=NZ_AAOS02000066.1:1..1731;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000066.1 RefSeq gene 1 881 . - . ID=gene-YPIP275_RS24625;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS24625;old_locus_tag=YPIP275_0396;partial=true;start_range=.,1 NZ_AAOS02000066.1 Protein Homology CDS 1 881 . - 0 ID=cds-WP_002213474.1;Parent=gene-YPIP275_RS24625;Dbxref=GenBank:WP_002213474.1;Name=WP_002213474.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS24625;partial=true;product=IS21-like element IS100 family transposase;protein_id=WP_002213474.1;start_range=.,1;transl_table=11 NZ_AAOS02000066.1 RefSeq gene 1533 1731 . - . ID=gene-YPIP275_RS29085;Name=YPIP275_RS29085;end_range=1731,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29085;partial=true NZ_AAOS02000066.1 GeneMarkS-2+ CDS 1533 1731 . - 1 ID=cds-WP_366534807.1;Parent=gene-YPIP275_RS29085;Dbxref=GenBank:WP_366534807.1;Name=WP_366534807.1;end_range=1731,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS29085;partial=true;product=hypothetical protein;protein_id=WP_366534807.1;transl_table=11 ##sequence-region NZ_AAOS02000065.1 1 1851 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000065.1 RefSeq region 1 1851 . + . ID=NZ_AAOS02000065.1:1..1851;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000065.1 RefSeq pseudogene 1 228 . - . ID=gene-YPIP275_RS24610;Name=YPIP275_RS24610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS24610;old_locus_tag=YPIP275_0821;partial=true;pseudo=true;start_range=.,1 NZ_AAOS02000065.1 Protein Homology CDS 1 228 . - 0 ID=cds-YPIP275_RS24610;Parent=gene-YPIP275_RS24610;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001285181.1;locus_tag=YPIP275_RS24610;partial=true;product=pesticin;pseudo=true;start_range=.,1;transl_table=11 NZ_AAOS02000065.1 RefSeq gene 457 762 . + . ID=gene-YPIP275_RS24615;Name=YPIP275_RS24615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24615;old_locus_tag=YPIP275_0823 NZ_AAOS02000065.1 Protein Homology CDS 457 762 . + 0 ID=cds-WP_002221218.1-2;Parent=gene-YPIP275_RS24615;Dbxref=GenBank:WP_002221218.1;Name=WP_002221218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221218.1;locus_tag=YPIP275_RS24615;product=hypothetical protein;protein_id=WP_002221218.1;transl_table=11 NZ_AAOS02000065.1 RefSeq gene 1005 1851 . + . ID=gene-YPIP275_RS24620;Name=pla;end_range=1851,.;gbkey=Gene;gene=pla;gene_biotype=protein_coding;locus_tag=YPIP275_RS24620;old_locus_tag=YPIP275_0824;partial=true NZ_AAOS02000065.1 Protein Homology CDS 1005 1851 . + 0 ID=cds-WP_002213467.1;Parent=gene-YPIP275_RS24620;Dbxref=GenBank:WP_002213467.1;Name=WP_002213467.1;end_range=1851,.;gbkey=CDS;gene=pla;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231174.1;locus_tag=YPIP275_RS24620;partial=true;product=omptin family plasminogen activator Pla;protein_id=WP_002213467.1;transl_table=11 ##sequence-region NZ_AAOS02000064.1 1 1863 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000064.1 RefSeq region 1 1863 . + . ID=NZ_AAOS02000064.1:1..1863;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000064.1 RefSeq gene 1 223 . - . ID=gene-YPIP275_RS24595;Name=YPIP275_RS24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24595;old_locus_tag=YPIP275_2434;partial=true;start_range=.,1 NZ_AAOS02000064.1 Protein Homology CDS 1 223 . - 0 ID=cds-WP_002213457.1;Parent=gene-YPIP275_RS24595;Dbxref=GenBank:WP_002213457.1;Name=WP_002213457.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218230.1;locus_tag=YPIP275_RS24595;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_002213457.1;start_range=.,1;transl_table=11 NZ_AAOS02000064.1 RefSeq gene 223 564 . - . ID=gene-YPIP275_RS24600;Name=YPIP275_RS24600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24600;old_locus_tag=YPIP275_2435 NZ_AAOS02000064.1 Protein Homology CDS 223 564 . - 0 ID=cds-WP_002225538.1;Parent=gene-YPIP275_RS24600;Dbxref=GenBank:WP_002225538.1;Name=WP_002225538.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002225538.1;locus_tag=YPIP275_RS24600;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_002225538.1;transl_table=11 ##sequence-region NZ_AAOS02000063.1 1 1921 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000063.1 RefSeq region 1 1921 . + . ID=NZ_AAOS02000063.1:1..1921;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000063.1 RefSeq gene 81 1103 . + . ID=gene-YPIP275_RS24585;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS24585;old_locus_tag=YPIP275_4987 NZ_AAOS02000063.1 Protein Homology CDS 81 1103 . + 0 ID=cds-WP_000255944.1;Parent=gene-YPIP275_RS24585;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS24585;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000063.1 RefSeq gene 1100 1882 . + . ID=gene-YPIP275_RS24590;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS24590;old_locus_tag=YPIP275_4988 NZ_AAOS02000063.1 Protein Homology CDS 1100 1882 . + 0 ID=cds-WP_001317493.1-2;Parent=gene-YPIP275_RS24590;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS24590;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 ##sequence-region NZ_AAOS02000062.1 1 2071 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000062.1 RefSeq region 1 2071 . + . ID=NZ_AAOS02000062.1:1..2071;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000062.1 RefSeq pseudogene 1 304 . - . ID=gene-YPIP275_RS24570;Name=YPIP275_RS24570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS24570;old_locus_tag=YPIP275_3858;partial=true;pseudo=true;start_range=.,1 NZ_AAOS02000062.1 Protein Homology CDS 1 304 . - 0 ID=cds-YPIP275_RS24570;Parent=gene-YPIP275_RS24570;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221218.1;locus_tag=YPIP275_RS24570;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_AAOS02000062.1 RefSeq gene 533 1606 . + . ID=gene-YPIP275_RS24575;Name=pst;gbkey=Gene;gene=pst;gene_biotype=protein_coding;locus_tag=YPIP275_RS24575;old_locus_tag=YPIP275_3859 NZ_AAOS02000062.1 Protein Homology CDS 533 1606 . + 0 ID=cds-WP_002218509.1;Parent=gene-YPIP275_RS24575;Dbxref=GenBank:WP_002218509.1;Name=WP_002218509.1;gbkey=CDS;gene=pst;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001285181.1;locus_tag=YPIP275_RS24575;product=pesticin;protein_id=WP_002218509.1;transl_table=11 NZ_AAOS02000062.1 RefSeq pseudogene 1641 1994 . - . ID=gene-YPIP275_RS24580;Name=YPIP275_RS24580;end_range=1994,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS24580;partial=true;pseudo=true NZ_AAOS02000062.1 Protein Homology CDS 1641 1994 . - 0 ID=cds-YPIP275_RS24580;Parent=gene-YPIP275_RS24580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1994,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028075.6;locus_tag=YPIP275_RS24580;partial=true;product=pesticin immunity protein;pseudo=true;transl_table=11 ##sequence-region NZ_AAOS02000061.1 1 2186 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000061.1 RefSeq region 1 2186 . + . ID=NZ_AAOS02000061.1:1..2186;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000061.1 RefSeq gene 1 256 . + . ID=gene-YPIP275_RS29080;Name=YPIP275_RS29080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29080;partial=true;start_range=.,1 NZ_AAOS02000061.1 GeneMarkS-2+ CDS 1 256 . + 1 ID=cds-WP_366534806.1;Parent=gene-YPIP275_RS29080;Dbxref=GenBank:WP_366534806.1;Name=WP_366534806.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS29080;partial=true;product=hypothetical protein;protein_id=WP_366534806.1;start_range=.,1;transl_table=11 NZ_AAOS02000061.1 RefSeq gene 387 728 . + . ID=gene-YPIP275_RS24555;Name=YPIP275_RS24555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24555;old_locus_tag=YPIP275_0389 NZ_AAOS02000061.1 Protein Homology CDS 387 728 . + 0 ID=cds-WP_002225538.1-2;Parent=gene-YPIP275_RS24555;Dbxref=GenBank:WP_002225538.1;Name=WP_002225538.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002225538.1;locus_tag=YPIP275_RS24555;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_002225538.1;transl_table=11 NZ_AAOS02000061.1 RefSeq gene 728 1027 . + . ID=gene-YPIP275_RS24560;Name=YPIP275_RS24560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24560;old_locus_tag=YPIP275_0390 NZ_AAOS02000061.1 Protein Homology CDS 728 1027 . + 0 ID=cds-WP_002213446.1;Parent=gene-YPIP275_RS24560;Dbxref=GenBank:WP_002213446.1;Name=WP_002213446.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218230.1;locus_tag=YPIP275_RS24560;product=helix-turn-helix domain-containing protein;protein_id=WP_002213446.1;transl_table=11 NZ_AAOS02000061.1 RefSeq gene 1214 2152 . - . ID=gene-YPIP275_RS24565;Name=pla;gbkey=Gene;gene=pla;gene_biotype=protein_coding;locus_tag=YPIP275_RS24565;old_locus_tag=YPIP275_0391 NZ_AAOS02000061.1 Protein Homology CDS 1214 2152 . - 0 ID=cds-WP_002218234.1;Parent=gene-YPIP275_RS24565;Dbxref=GenBank:WP_002218234.1;Name=WP_002218234.1;gbkey=CDS;gene=pla;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231174.1;locus_tag=YPIP275_RS24565;product=omptin family plasminogen activator Pla;protein_id=WP_002218234.1;transl_table=11 ##sequence-region NZ_AAOS02000060.1 1 2383 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000060.1 RefSeq region 1 2383 . + . ID=NZ_AAOS02000060.1:1..2383;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000060.1 RefSeq pseudogene 1 148 . + . ID=gene-YPIP275_RS29075;Name=YPIP275_RS29075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29075;partial=true;pseudo=true;start_range=.,1 NZ_AAOS02000060.1 Protein Homology CDS 1 148 . + 1 ID=cds-YPIP275_RS29075;Parent=gene-YPIP275_RS29075;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220814.1;locus_tag=YPIP275_RS29075;partial=true;product=5'-3' exonuclease family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_AAOS02000060.1 RefSeq gene 148 414 . + . ID=gene-YPIP275_RS24535;Name=YPIP275_RS24535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24535;old_locus_tag=YPIP275_1507 NZ_AAOS02000060.1 GeneMarkS-2+ CDS 148 414 . + 0 ID=cds-WP_000920226.1;Parent=gene-YPIP275_RS24535;Dbxref=GenBank:WP_000920226.1;Name=WP_000920226.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS24535;product=hypothetical protein;protein_id=WP_000920226.1;transl_table=11 NZ_AAOS02000060.1 RefSeq gene 417 1493 . + . ID=gene-YPIP275_RS24540;Name=YPIP275_RS24540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24540;old_locus_tag=YPIP275_1508 NZ_AAOS02000060.1 Protein Homology CDS 417 1493 . + 0 ID=cds-WP_002213437.1;Parent=gene-YPIP275_RS24540;Dbxref=GenBank:WP_002213437.1;Name=WP_002213437.1;Ontology_term=GO:0006281,GO:0006310,GO:0003684,GO:0003697,GO:0005524,GO:0016887,GO:0140664;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATP-dependent DNA damage sensor activity|0140664||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF012381.7;locus_tag=YPIP275_RS24540;product=recombinase RecA;protein_id=WP_002213437.1;transl_table=11 NZ_AAOS02000060.1 RefSeq gene 1584 1784 . + . ID=gene-YPIP275_RS24545;Name=YPIP275_RS24545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24545;old_locus_tag=YPIP275_1509 NZ_AAOS02000060.1 Protein Homology CDS 1584 1784 . + 0 ID=cds-WP_002213439.1;Parent=gene-YPIP275_RS24545;Dbxref=GenBank:WP_002213439.1;Name=WP_002213439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213439.1;locus_tag=YPIP275_RS24545;product=hypothetical protein;protein_id=WP_002213439.1;transl_table=11 NZ_AAOS02000060.1 RefSeq gene 1788 2383 . + . ID=gene-YPIP275_RS24550;Name=YPIP275_RS24550;end_range=2383,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24550;old_locus_tag=YPIP275_1511;partial=true NZ_AAOS02000060.1 Protein Homology CDS 1788 2383 . + 0 ID=cds-WP_002213441.1;Parent=gene-YPIP275_RS24550;Dbxref=GenBank:WP_002213441.1;Name=WP_002213441.1;Ontology_term=GO:0016020;end_range=2383,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016051665.1;locus_tag=YPIP275_RS24550;partial=true;product=SPFH domain-containing protein;protein_id=WP_002213441.1;transl_table=11 ##sequence-region NZ_AAOS02000059.1 1 2537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000059.1 RefSeq region 1 2537 . + . ID=NZ_AAOS02000059.1:1..2537;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000059.1 RefSeq gene 74 856 . + . ID=gene-YPIP275_RS29390;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS29390;old_locus_tag=YPIP275_4464 NZ_AAOS02000059.1 Protein Homology CDS 74 856 . + 0 ID=cds-WP_001317493.1-3;Parent=gene-YPIP275_RS29390;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS29390;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000059.1 RefSeq gene 1893 2087 . + . ID=gene-YPIP275_RS29395;Name=YPIP275_RS29395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29395;old_locus_tag=YPIP275_4465 NZ_AAOS02000059.1 Protein Homology CDS 1893 2087 . + 0 ID=cds-WP_002213433.1;Parent=gene-YPIP275_RS29395;Dbxref=GenBank:WP_002213433.1;Name=WP_002213433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041627.1;locus_tag=YPIP275_RS29395;product=Rop family plasmid primer RNA-binding protein;protein_id=WP_002213433.1;transl_table=11 ##sequence-region NZ_AAOS02000058.1 1 2827 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000058.1 RefSeq region 1 2827 . + . ID=NZ_AAOS02000058.1:1..2827;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000058.1 RefSeq gene 1 281 . + . ID=gene-YPIP275_RS24495;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=YPIP275_RS24495;old_locus_tag=YPIP275_0056;partial=true;start_range=.,1 NZ_AAOS02000058.1 Protein Homology CDS 1 281 . + 2 ID=cds-WP_002213420.1;Parent=gene-YPIP275_RS24495;Dbxref=GenBank:WP_002213420.1;Name=WP_002213420.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplD;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=YPIP275_RS24495;partial=true;product=uL4 family ribosomal protein;protein_id=WP_002213420.1;start_range=.,1;transl_table=11 NZ_AAOS02000058.1 RefSeq gene 278 580 . + . ID=gene-YPIP275_RS24500;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=YPIP275_RS24500;old_locus_tag=YPIP275_0057 NZ_AAOS02000058.1 Protein Homology CDS 278 580 . + 0 ID=cds-WP_002213423.1;Parent=gene-YPIP275_RS24500;Dbxref=GenBank:WP_002213423.1;Name=WP_002213423.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=YPIP275_RS24500;product=50S ribosomal protein L23;protein_id=WP_002213423.1;transl_table=11 NZ_AAOS02000058.1 RefSeq gene 597 1421 . + . ID=gene-YPIP275_RS24505;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=YPIP275_RS24505;old_locus_tag=YPIP275_0058 NZ_AAOS02000058.1 Protein Homology CDS 597 1421 . + 0 ID=cds-WP_002213425.1;Parent=gene-YPIP275_RS24505;Dbxref=GenBank:WP_002213425.1;Name=WP_002213425.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213425.1;locus_tag=YPIP275_RS24505;product=50S ribosomal protein L2;protein_id=WP_002213425.1;transl_table=11 NZ_AAOS02000058.1 RefSeq gene 1436 1714 . + . ID=gene-YPIP275_RS24510;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=YPIP275_RS24510;old_locus_tag=YPIP275_0059 NZ_AAOS02000058.1 Protein Homology CDS 1436 1714 . + 0 ID=cds-WP_002213430.1;Parent=gene-YPIP275_RS24510;Dbxref=GenBank:WP_002213430.1;Name=WP_002213430.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=YPIP275_RS24510;product=30S ribosomal protein S19;protein_id=WP_002213430.1;transl_table=11 NZ_AAOS02000058.1 RefSeq gene 1729 2061 . + . ID=gene-YPIP275_RS24515;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=YPIP275_RS24515 NZ_AAOS02000058.1 Protein Homology CDS 1729 2061 . + 0 ID=cds-WP_002223844.1;Parent=gene-YPIP275_RS24515;Dbxref=GenBank:WP_002223844.1;Name=WP_002223844.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=YPIP275_RS24515;product=50S ribosomal protein L22;protein_id=WP_002223844.1;transl_table=11 NZ_AAOS02000058.1 RefSeq gene 2079 2777 . + . ID=gene-YPIP275_RS24520;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=YPIP275_RS24520;old_locus_tag=YPIP275_0060 NZ_AAOS02000058.1 Protein Homology CDS 2079 2777 . + 0 ID=cds-WP_002221644.1;Parent=gene-YPIP275_RS24520;Dbxref=GenBank:WP_002221644.1;Name=WP_002221644.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=YPIP275_RS24520;product=30S ribosomal protein S3;protein_id=WP_002221644.1;transl_table=11 ##sequence-region NZ_AAOS02000057.1 1 3177 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000057.1 RefSeq region 1 3177 . + . ID=NZ_AAOS02000057.1:1..3177;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000057.1 RefSeq gene 1 79 . - . ID=gene-YPIP275_RS24485;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=YPIP275_RS24485;old_locus_tag=YPIP275_0779;partial=true;start_range=.,1 NZ_AAOS02000057.1 cmsearch rRNA 1 79 . - . ID=rna-YPIP275_RS24485;Parent=gene-YPIP275_RS24485;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24485;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_AAOS02000057.1 cmsearch exon 1 79 . - . ID=exon-YPIP275_RS24485-1;Parent=rna-YPIP275_RS24485;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24485;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_AAOS02000057.1 RefSeq gene 189 3095 . - . ID=gene-YPIP275_RS24490;Name=YPIP275_RS24490;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPIP275_RS24490;old_locus_tag=YPIP275_0780 NZ_AAOS02000057.1 cmsearch rRNA 189 3095 . - . ID=rna-YPIP275_RS24490;Parent=gene-YPIP275_RS24490;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24490;product=23S ribosomal RNA NZ_AAOS02000057.1 cmsearch exon 189 3095 . - . ID=exon-YPIP275_RS24490-1;Parent=rna-YPIP275_RS24490;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24490;product=23S ribosomal RNA ##sequence-region NZ_AAOS02000056.1 1 3327 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000056.1 RefSeq region 1 3327 . + . ID=NZ_AAOS02000056.1:1..3327;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000056.1 RefSeq gene 1 1107 . + . ID=gene-YPIP275_RS24470;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=YPIP275_RS24470;old_locus_tag=YPIP275_3937;partial=true;start_range=.,1 NZ_AAOS02000056.1 Protein Homology CDS 1 1107 . + 0 ID=cds-WP_002210016.1;Parent=gene-YPIP275_RS24470;Dbxref=GenBank:WP_002210016.1;Name=WP_002210016.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213011.1;locus_tag=YPIP275_RS24470;partial=true;product=type VI secretion system baseplate subunit TssK;protein_id=WP_002210016.1;start_range=.,1;transl_table=11 NZ_AAOS02000056.1 RefSeq gene 1104 1790 . + . ID=gene-YPIP275_RS24475;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=YPIP275_RS24475;old_locus_tag=YPIP275_3938 NZ_AAOS02000056.1 Protein Homology CDS 1104 1790 . + 0 ID=cds-WP_002210015.1;Parent=gene-YPIP275_RS24475;Dbxref=GenBank:WP_002210015.1;Name=WP_002210015.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104585.1;locus_tag=YPIP275_RS24475;product=type VI secretion system protein TssL%2C short form;protein_id=WP_002210015.1;transl_table=11 NZ_AAOS02000056.1 RefSeq gene 1790 3327 . + . ID=gene-YPIP275_RS24480;Name=YPIP275_RS24480;end_range=3327,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24480;old_locus_tag=YPIP275_3939;partial=true NZ_AAOS02000056.1 Protein Homology CDS 1790 3327 . + 0 ID=cds-WP_002213010.1;Parent=gene-YPIP275_RS24480;Dbxref=GenBank:WP_002213010.1;Name=WP_002213010.1;end_range=3327,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683668.1;locus_tag=YPIP275_RS24480;partial=true;product=OmpA family protein;protein_id=WP_002213010.1;transl_table=11 ##sequence-region NZ_AAOS02000055.1 1 3563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000055.1 RefSeq region 1 3563 . + . ID=NZ_AAOS02000055.1:1..3563;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000055.1 RefSeq gene 8 790 . + . ID=gene-YPIP275_RS24435;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS24435;old_locus_tag=YPIP275_0061 NZ_AAOS02000055.1 Protein Homology CDS 8 790 . + 0 ID=cds-WP_001317493.1-4;Parent=gene-YPIP275_RS24435;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS24435;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000055.1 RefSeq pseudogene 857 1105 . - . ID=gene-YPIP275_RS24440;Name=YPIP275_RS24440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS24440;old_locus_tag=YPIP275_0062;partial=true;pseudo=true;start_range=.,857 NZ_AAOS02000055.1 Protein Homology CDS 857 1105 . - 0 ID=cds-YPIP275_RS24440;Parent=gene-YPIP275_RS24440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952428.1;locus_tag=YPIP275_RS24440;partial=true;product=hypothetical protein;pseudo=true;start_range=.,857;transl_table=11 NZ_AAOS02000055.1 RefSeq pseudogene 1208 1852 . + . ID=gene-YPIP275_RS24450;Name=YPIP275_RS24450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS24450;old_locus_tag=YPIP275_0064;partial=true;pseudo=true;start_range=.,1208 NZ_AAOS02000055.1 Protein Homology CDS 1208 1852 . + 0 ID=cds-YPIP275_RS24450;Parent=gene-YPIP275_RS24450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611475.1;locus_tag=YPIP275_RS24450;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1208;transl_table=11 NZ_AAOS02000055.1 RefSeq gene 1915 2307 . - . ID=gene-YPIP275_RS24455;Name=sycE;gbkey=Gene;gene=sycE;gene_biotype=protein_coding;gene_synonym=yerA;locus_tag=YPIP275_RS24455;old_locus_tag=YPIP275_0065 NZ_AAOS02000055.1 Protein Homology CDS 1915 2307 . - 0 ID=cds-WP_002213403.1;Parent=gene-YPIP275_RS24455;Dbxref=GenBank:WP_002213403.1;Name=WP_002213403.1;gbkey=CDS;gene=sycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213403.1;locus_tag=YPIP275_RS24455;product=type III secretion system chaperone SycE/YerA;protein_id=WP_002213403.1;transl_table=11 NZ_AAOS02000055.1 RefSeq gene 2501 3160 . + . ID=gene-YPIP275_RS24460;Name=yopE;gbkey=Gene;gene=yopE;gene_biotype=protein_coding;locus_tag=YPIP275_RS24460;old_locus_tag=YPIP275_0066 NZ_AAOS02000055.1 Protein Homology CDS 2501 3160 . + 0 ID=cds-WP_002229754.1;Parent=gene-YPIP275_RS24460;Dbxref=GenBank:WP_002229754.1;Name=WP_002229754.1;gbkey=CDS;gene=yopE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229754.1;locus_tag=YPIP275_RS24460;product=type III secretion system effector GTPase activator YopE;protein_id=WP_002229754.1;transl_table=11 NZ_AAOS02000055.1 RefSeq gene 3300 3563 . - . ID=gene-YPIP275_RS24465;Name=YPIP275_RS24465;end_range=3563,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24465;old_locus_tag=YPIP275_0067;partial=true NZ_AAOS02000055.1 Protein Homology CDS 3300 3563 . - 0 ID=cds-WP_002213407.1;Parent=gene-YPIP275_RS24465;Dbxref=GenBank:WP_002213407.1;Name=WP_002213407.1;Ontology_term=GO:0090729,GO:0110001;end_range=3563,.;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213360.1;locus_tag=YPIP275_RS24465;partial=true;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_002213407.1;transl_table=11 ##sequence-region NZ_AAOS02000054.1 1 5249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000054.1 RefSeq region 1 5249 . + . ID=NZ_AAOS02000054.1:1..5249;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000054.1 RefSeq gene 128 1670 . + . ID=gene-YPIP275_RS24415;Name=YPIP275_RS24415;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPIP275_RS24415;old_locus_tag=YPIP275_3992 NZ_AAOS02000054.1 cmsearch rRNA 128 1670 . + . ID=rna-YPIP275_RS24415;Parent=gene-YPIP275_RS24415;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24415;product=16S ribosomal RNA NZ_AAOS02000054.1 cmsearch exon 128 1670 . + . ID=exon-YPIP275_RS24415-1;Parent=rna-YPIP275_RS24415;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24415;product=16S ribosomal RNA NZ_AAOS02000054.1 RefSeq gene 1807 1882 . + . ID=gene-YPIP275_RS24420;Name=YPIP275_RS24420;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS24420;old_locus_tag=YPIP275_3993 NZ_AAOS02000054.1 tRNAscan-SE tRNA 1807 1882 . + . ID=rna-YPIP275_RS24420;Parent=gene-YPIP275_RS24420;anticodon=(pos:1841..1843);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS24420;product=tRNA-Glu NZ_AAOS02000054.1 tRNAscan-SE exon 1807 1882 . + . ID=exon-YPIP275_RS24420-1;Parent=rna-YPIP275_RS24420;anticodon=(pos:1841..1843);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS24420;product=tRNA-Glu NZ_AAOS02000054.1 RefSeq gene 2135 5041 . + . ID=gene-YPIP275_RS24425;Name=YPIP275_RS24425;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPIP275_RS24425;old_locus_tag=YPIP275_3994 NZ_AAOS02000054.1 cmsearch rRNA 2135 5041 . + . ID=rna-YPIP275_RS24425;Parent=gene-YPIP275_RS24425;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24425;product=23S ribosomal RNA NZ_AAOS02000054.1 cmsearch exon 2135 5041 . + . ID=exon-YPIP275_RS24425-1;Parent=rna-YPIP275_RS24425;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24425;product=23S ribosomal RNA NZ_AAOS02000054.1 RefSeq gene 5151 5249 . + . ID=gene-YPIP275_RS24430;Name=rrf;end_range=5249,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=YPIP275_RS24430;old_locus_tag=YPIP275_3995;partial=true NZ_AAOS02000054.1 cmsearch rRNA 5151 5249 . + . ID=rna-YPIP275_RS24430;Parent=gene-YPIP275_RS24430;Dbxref=RFAM:RF00001;end_range=5249,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24430;partial=true;product=5S ribosomal RNA NZ_AAOS02000054.1 cmsearch exon 5151 5249 . + . ID=exon-YPIP275_RS24430-1;Parent=rna-YPIP275_RS24430;Dbxref=RFAM:RF00001;end_range=5249,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS24430;partial=true;product=5S ribosomal RNA ##sequence-region NZ_AAOS02000053.1 1 6389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000053.1 RefSeq region 1 6389 . + . ID=NZ_AAOS02000053.1:1..6389;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000053.1 RefSeq gene 1 1813 . + . ID=gene-YPIP275_RS24395;Name=YPIP275_RS24395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24395;old_locus_tag=YPIP275_4697;partial=true;start_range=.,1 NZ_AAOS02000053.1 Protein Homology CDS 1 1813 . + 1 ID=cds-WP_002213382.1;Parent=gene-YPIP275_RS24395;Dbxref=GenBank:WP_002213382.1;Name=WP_002213382.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213876.1;locus_tag=YPIP275_RS24395;partial=true;product=type VI secretion system Vgr family protein;protein_id=WP_002213382.1;start_range=.,1;transl_table=11 NZ_AAOS02000053.1 RefSeq gene 1819 2277 . + . ID=gene-YPIP275_RS24400;Name=YPIP275_RS24400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24400;old_locus_tag=YPIP275_4698 NZ_AAOS02000053.1 Protein Homology CDS 1819 2277 . + 0 ID=cds-WP_002213383.1;Parent=gene-YPIP275_RS24400;Dbxref=GenBank:WP_002213383.1;Name=WP_002213383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213383.1;locus_tag=YPIP275_RS24400;product=DUF1795 domain-containing protein;protein_id=WP_002213383.1;transl_table=11 NZ_AAOS02000053.1 RefSeq gene 2270 5134 . + . ID=gene-YPIP275_RS24405;Name=YPIP275_RS24405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24405;old_locus_tag=YPIP275_4699 NZ_AAOS02000053.1 Protein Homology CDS 2270 5134 . + 0 ID=cds-WP_002213873.1;Parent=gene-YPIP275_RS24405;Dbxref=GenBank:WP_002213873.1;Name=WP_002213873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213873.1;locus_tag=YPIP275_RS24405;product=PAAR/RHS domain-containing protein;protein_id=WP_002213873.1;transl_table=11 NZ_AAOS02000053.1 RefSeq gene 5162 6389 . + . ID=gene-YPIP275_RS24410;Name=YPIP275_RS24410;end_range=6389,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24410;old_locus_tag=YPIP275_4700;partial=true NZ_AAOS02000053.1 Protein Homology CDS 5162 6389 . + 0 ID=cds-WP_002213384.1;Parent=gene-YPIP275_RS24410;Dbxref=GenBank:WP_002213384.1;Name=WP_002213384.1;end_range=6389,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016603406.1;locus_tag=YPIP275_RS24410;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_002213384.1;transl_table=11 ##sequence-region NZ_AAOS02000052.1 1 6428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000052.1 RefSeq region 1 6428 . + . ID=NZ_AAOS02000052.1:1..6428;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000052.1 RefSeq gene 1 545 . + . ID=gene-YPIP275_RS24345;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=YPIP275_RS24345;old_locus_tag=YPIP275_0470;partial=true;start_range=.,1 NZ_AAOS02000052.1 Protein Homology CDS 1 545 . + 2 ID=cds-WP_043940374.1;Parent=gene-YPIP275_RS24345;Dbxref=GenBank:WP_043940374.1;Name=WP_043940374.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227089.1;locus_tag=YPIP275_RS24345;partial=true;product=cell division protein ZipA;protein_id=WP_043940374.1;start_range=.,1;transl_table=11 NZ_AAOS02000052.1 RefSeq gene 636 2648 . + . ID=gene-YPIP275_RS24350;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=YPIP275_RS24350;old_locus_tag=YPIP275_0471 NZ_AAOS02000052.1 Protein Homology CDS 636 2648 . + 0 ID=cds-WP_002213368.1;Parent=gene-YPIP275_RS24350;Dbxref=GenBank:WP_002213368.1;Name=WP_002213368.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016599134.1;locus_tag=YPIP275_RS24350;product=NAD-dependent DNA ligase LigA;protein_id=WP_002213368.1;transl_table=11 NZ_AAOS02000052.1 RefSeq gene 2668 2883 . + . ID=gene-YPIP275_RS24355;Name=YPIP275_RS24355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24355;old_locus_tag=YPIP275_0472 NZ_AAOS02000052.1 Protein Homology CDS 2668 2883 . + 0 ID=cds-WP_002213369.1;Parent=gene-YPIP275_RS24355;Dbxref=GenBank:WP_002213369.1;Name=WP_002213369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213369.1;locus_tag=YPIP275_RS24355;product=DUF3820 family protein;protein_id=WP_002213369.1;transl_table=11 NZ_AAOS02000052.1 RefSeq gene 2984 3331 . - . ID=gene-YPIP275_RS24360;Name=YPIP275_RS24360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24360;old_locus_tag=YPIP275_0473 NZ_AAOS02000052.1 Protein Homology CDS 2984 3331 . - 0 ID=cds-WP_002213372.1;Parent=gene-YPIP275_RS24360;Dbxref=GenBank:WP_002213372.1;Name=WP_002213372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192734.1;locus_tag=YPIP275_RS24360;product=FlxA-like family protein;protein_id=WP_002213372.1;transl_table=11 NZ_AAOS02000052.1 RefSeq gene 3463 4068 . - . ID=gene-YPIP275_RS24365;Name=YPIP275_RS24365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24365;old_locus_tag=YPIP275_0474 NZ_AAOS02000052.1 Protein Homology CDS 3463 4068 . - 0 ID=cds-WP_002213374.1;Parent=gene-YPIP275_RS24365;Dbxref=GenBank:WP_002213374.1;Name=WP_002213374.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213374.1;locus_tag=YPIP275_RS24365;product=nucleotidyltransferase family protein;protein_id=WP_002213374.1;transl_table=11 NZ_AAOS02000052.1 RefSeq gene 4263 4338 . - . ID=gene-YPIP275_RS24370;Name=YPIP275_RS24370;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS24370;old_locus_tag=YPIP275_0475 NZ_AAOS02000052.1 tRNAscan-SE tRNA 4263 4338 . - . ID=rna-YPIP275_RS24370;Parent=gene-YPIP275_RS24370;anticodon=(pos:complement(4303..4305));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS24370;product=tRNA-Ala NZ_AAOS02000052.1 tRNAscan-SE exon 4263 4338 . - . ID=exon-YPIP275_RS24370-1;Parent=rna-YPIP275_RS24370;anticodon=(pos:complement(4303..4305));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS24370;product=tRNA-Ala NZ_AAOS02000052.1 RefSeq gene 4416 4491 . - . ID=gene-YPIP275_RS24375;Name=YPIP275_RS24375;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS24375;old_locus_tag=YPIP275_0476 NZ_AAOS02000052.1 tRNAscan-SE tRNA 4416 4491 . - . ID=rna-YPIP275_RS24375;Parent=gene-YPIP275_RS24375;anticodon=(pos:complement(4456..4458));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS24375;product=tRNA-Ala NZ_AAOS02000052.1 tRNAscan-SE exon 4416 4491 . - . ID=exon-YPIP275_RS24375-1;Parent=rna-YPIP275_RS24375;anticodon=(pos:complement(4456..4458));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS24375;product=tRNA-Ala NZ_AAOS02000052.1 RefSeq gene 4782 5240 . - . ID=gene-YPIP275_RS24380;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS24380;old_locus_tag=YPIP275_0477 NZ_AAOS02000052.1 Protein Homology CDS 4782 5240 . - 0 ID=cds-WP_002213775.1-3;Parent=gene-YPIP275_RS24380;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS24380;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000052.1 RefSeq gene 5433 6428 . - . ID=gene-YPIP275_RS24385;Name=gltX;end_range=6428,.;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=YPIP275_RS24385;old_locus_tag=YPIP275_0478;partial=true NZ_AAOS02000052.1 Protein Homology CDS 5433 6428 . - 0 ID=cds-WP_002213376.1;Parent=gene-YPIP275_RS24385;Dbxref=GenBank:WP_002213376.1;Name=WP_002213376.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;end_range=6428,.;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222185.1;locus_tag=YPIP275_RS24385;partial=true;product=glutamate--tRNA ligase;protein_id=WP_002213376.1;transl_table=11 ##sequence-region NZ_AAOS02000051.1 1 6469 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000051.1 RefSeq region 1 6469 . + . ID=NZ_AAOS02000051.1:1..6469;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000051.1 RefSeq pseudogene 54 1199 . + . ID=gene-YPIP275_RS29050;Name=YPIP275_RS29050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29050;pseudo=true NZ_AAOS02000051.1 Protein Homology CDS 54 1199 . + 0 ID=cds-YPIP275_RS29050;Parent=gene-YPIP275_RS29050;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558235.1;locus_tag=YPIP275_RS29050;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_AAOS02000051.1 RefSeq gene 1959 3125 . + . ID=gene-YPIP275_RS24315;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=YPIP275_RS24315;old_locus_tag=YPIP275_2428 NZ_AAOS02000051.1 Protein Homology CDS 1959 3125 . + 0 ID=cds-WP_002220902.1;Parent=gene-YPIP275_RS24315;Dbxref=GenBank:WP_002220902.1;Name=WP_002220902.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010891239.1;locus_tag=YPIP275_RS24315;product=plasmid-partitioning protein SopA;protein_id=WP_002220902.1;transl_table=11 NZ_AAOS02000051.1 RefSeq gene 3122 4087 . + . ID=gene-YPIP275_RS24320;Name=YPIP275_RS24320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24320;old_locus_tag=YPIP275_2429 NZ_AAOS02000051.1 Protein Homology CDS 3122 4087 . + 0 ID=cds-WP_002213354.1;Parent=gene-YPIP275_RS24320;Dbxref=GenBank:WP_002213354.1;Name=WP_002213354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213354.1;locus_tag=YPIP275_RS24320;product=ParB/RepB/Spo0J family plasmid partition protein;protein_id=WP_002213354.1;transl_table=11 NZ_AAOS02000051.1 RefSeq gene 4247 4483 . + . ID=gene-YPIP275_RS29060;Name=YPIP275_RS29060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29060 NZ_AAOS02000051.1 Protein Homology CDS 4247 4483 . + 0 ID=cds-WP_154020274.1;Parent=gene-YPIP275_RS29060;Dbxref=GenBank:WP_154020274.1;Name=WP_154020274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171998.1;locus_tag=YPIP275_RS29060;product=hypothetical protein;protein_id=WP_154020274.1;transl_table=11 NZ_AAOS02000051.1 RefSeq gene 4632 4805 . - . ID=gene-YPIP275_RS29065;Name=YPIP275_RS29065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29065;old_locus_tag=YPIP275_2430 NZ_AAOS02000051.1 GeneMarkS-2+ CDS 4632 4805 . - 0 ID=cds-WP_002213357.1;Parent=gene-YPIP275_RS29065;Dbxref=GenBank:WP_002213357.1;Name=WP_002213357.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS29065;product=hypothetical protein;protein_id=WP_002213357.1;transl_table=11 NZ_AAOS02000051.1 RefSeq pseudogene 4891 5183 . + . ID=gene-YPIP275_RS29070;Name=YPIP275_RS29070;end_range=5183,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29070;partial=true;pseudo=true NZ_AAOS02000051.1 Protein Homology CDS 4891 5183 . + 0 ID=cds-YPIP275_RS29070;Parent=gene-YPIP275_RS29070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0006313,GO:0015074,GO:0032196,GO:0003677,GO:0004803;end_range=5183,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA transposition|0006313||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1;locus_tag=YPIP275_RS29070;partial=true;product=transposase family protein;pseudo=true;transl_table=11 NZ_AAOS02000051.1 RefSeq gene 5349 5591 . + . ID=gene-YPIP275_RS24330;Name=YPIP275_RS24330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24330;old_locus_tag=YPIP275_2431 NZ_AAOS02000051.1 Protein Homology CDS 5349 5591 . + 0 ID=cds-WP_002224342.1;Parent=gene-YPIP275_RS24330;Dbxref=GenBank:WP_002224342.1;Name=WP_002224342.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224342.1;locus_tag=YPIP275_RS24330;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_002224342.1;transl_table=11 NZ_AAOS02000051.1 RefSeq gene 5584 5883 . + . ID=gene-YPIP275_RS24335;Name=YPIP275_RS24335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24335;old_locus_tag=YPIP275_2432 NZ_AAOS02000051.1 Protein Homology CDS 5584 5883 . + 0 ID=cds-WP_002213360.1;Parent=gene-YPIP275_RS24335;Dbxref=GenBank:WP_002213360.1;Name=WP_002213360.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213360.1;locus_tag=YPIP275_RS24335;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_002213360.1;transl_table=11 NZ_AAOS02000051.1 RefSeq gene 6023 6469 . - . ID=gene-YPIP275_RS24340;Name=yopE;end_range=6469,.;gbkey=Gene;gene=yopE;gene_biotype=protein_coding;locus_tag=YPIP275_RS24340;old_locus_tag=YPIP275_2433;partial=true NZ_AAOS02000051.1 Protein Homology CDS 6023 6469 . - 0 ID=cds-WP_043940373.1;Parent=gene-YPIP275_RS24340;Dbxref=GenBank:WP_043940373.1;Name=WP_043940373.1;end_range=6469,.;gbkey=CDS;gene=yopE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229754.1;locus_tag=YPIP275_RS24340;partial=true;product=type III secretion system effector GTPase activator YopE;protein_id=WP_043940373.1;transl_table=11 ##sequence-region NZ_AAOS02000050.1 1 7070 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000050.1 RefSeq region 1 7070 . + . ID=NZ_AAOS02000050.1:1..7070;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000050.1 RefSeq gene 53 244 . + . ID=gene-YPIP275_RS24220;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=YPIP275_RS24220;old_locus_tag=YPIP275_2622 NZ_AAOS02000050.1 Protein Homology CDS 53 244 . + 0 ID=cds-WP_043940372.1;Parent=gene-YPIP275_RS24220;Dbxref=GenBank:WP_043940372.1;Name=WP_043940372.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=YPIP275_RS24220;product=50S ribosomal protein L29;protein_id=WP_043940372.1;transl_table=11 NZ_AAOS02000050.1 RefSeq gene 244 498 . + . ID=gene-YPIP275_RS24225;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS24225 NZ_AAOS02000050.1 Protein Homology CDS 244 498 . + 0 ID=cds-WP_002228135.1;Parent=gene-YPIP275_RS24225;Dbxref=GenBank:WP_002228135.1;Name=WP_002228135.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=YPIP275_RS24225;product=30S ribosomal protein S17;protein_id=WP_002228135.1;transl_table=11 NZ_AAOS02000050.1 RefSeq gene 679 1050 . + . ID=gene-YPIP275_RS24230;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=YPIP275_RS24230;old_locus_tag=YPIP275_2623 NZ_AAOS02000050.1 Protein Homology CDS 679 1050 . + 0 ID=cds-WP_002213325.1;Parent=gene-YPIP275_RS24230;Dbxref=GenBank:WP_002213325.1;Name=WP_002213325.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=YPIP275_RS24230;product=50S ribosomal protein L14;protein_id=WP_002213325.1;transl_table=11 NZ_AAOS02000050.1 RefSeq gene 1061 1375 . + . ID=gene-YPIP275_RS24235;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=YPIP275_RS24235;old_locus_tag=YPIP275_2624 NZ_AAOS02000050.1 Protein Homology CDS 1061 1375 . + 0 ID=cds-WP_002213327.1;Parent=gene-YPIP275_RS24235;Dbxref=GenBank:WP_002213327.1;Name=WP_002213327.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=YPIP275_RS24235;product=50S ribosomal protein L24;protein_id=WP_002213327.1;transl_table=11 NZ_AAOS02000050.1 RefSeq gene 1390 1929 . + . ID=gene-YPIP275_RS24240;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=YPIP275_RS24240;old_locus_tag=YPIP275_2625 NZ_AAOS02000050.1 Protein Homology CDS 1390 1929 . + 0 ID=cds-WP_002213329.1;Parent=gene-YPIP275_RS24240;Dbxref=GenBank:WP_002213329.1;Name=WP_002213329.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=YPIP275_RS24240;product=50S ribosomal protein L5;protein_id=WP_002213329.1;transl_table=11 NZ_AAOS02000050.1 RefSeq gene 1943 2248 . + . ID=gene-YPIP275_RS24245;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=YPIP275_RS24245;old_locus_tag=YPIP275_2626 NZ_AAOS02000050.1 Protein Homology CDS 1943 2248 . + 0 ID=cds-WP_002213330.1;Parent=gene-YPIP275_RS24245;Dbxref=GenBank:WP_002213330.1;Name=WP_002213330.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=YPIP275_RS24245;product=30S ribosomal protein S14;protein_id=WP_002213330.1;transl_table=11 NZ_AAOS02000050.1 RefSeq gene 2282 2674 . + . ID=gene-YPIP275_RS24250;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=YPIP275_RS24250;old_locus_tag=YPIP275_2627 NZ_AAOS02000050.1 Protein Homology CDS 2282 2674 . + 0 ID=cds-WP_002213332.1;Parent=gene-YPIP275_RS24250;Dbxref=GenBank:WP_002213332.1;Name=WP_002213332.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=YPIP275_RS24250;product=30S ribosomal protein S8;protein_id=WP_002213332.1;transl_table=11 NZ_AAOS02000050.1 RefSeq gene 2689 3222 . + . ID=gene-YPIP275_RS24255;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=YPIP275_RS24255;old_locus_tag=YPIP275_2628 NZ_AAOS02000050.1 Protein Homology CDS 2689 3222 . + 0 ID=cds-WP_002213334.1;Parent=gene-YPIP275_RS24255;Dbxref=GenBank:WP_002213334.1;Name=WP_002213334.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=YPIP275_RS24255;product=50S ribosomal protein L6;protein_id=WP_002213334.1;transl_table=11 NZ_AAOS02000050.1 RefSeq gene 3232 3585 . + . ID=gene-YPIP275_RS24260;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=YPIP275_RS24260;old_locus_tag=YPIP275_2629 NZ_AAOS02000050.1 Protein Homology CDS 3232 3585 . + 0 ID=cds-WP_002213336.1;Parent=gene-YPIP275_RS24260;Dbxref=GenBank:WP_002213336.1;Name=WP_002213336.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=YPIP275_RS24260;product=50S ribosomal protein L18;protein_id=WP_002213336.1;transl_table=11 NZ_AAOS02000050.1 RefSeq gene 3600 4103 . + . ID=gene-YPIP275_RS24265;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=YPIP275_RS24265;old_locus_tag=YPIP275_2630 NZ_AAOS02000050.1 Protein Homology CDS 3600 4103 . + 0 ID=cds-WP_002213337.1;Parent=gene-YPIP275_RS24265;Dbxref=GenBank:WP_002213337.1;Name=WP_002213337.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=YPIP275_RS24265;product=30S ribosomal protein S5;protein_id=WP_002213337.1;transl_table=11 NZ_AAOS02000050.1 RefSeq gene 4106 4285 . + . ID=gene-YPIP275_RS24270;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=YPIP275_RS24270;old_locus_tag=YPIP275_2631 NZ_AAOS02000050.1 Protein Homology CDS 4106 4285 . + 0 ID=cds-WP_002213339.1;Parent=gene-YPIP275_RS24270;Dbxref=GenBank:WP_002213339.1;Name=WP_002213339.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=YPIP275_RS24270;product=50S ribosomal protein L30;protein_id=WP_002213339.1;transl_table=11 NZ_AAOS02000050.1 RefSeq gene 4289 4723 . + . ID=gene-YPIP275_RS24275;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=YPIP275_RS24275;old_locus_tag=YPIP275_2632 NZ_AAOS02000050.1 Protein Homology CDS 4289 4723 . + 0 ID=cds-WP_002213341.1;Parent=gene-YPIP275_RS24275;Dbxref=GenBank:WP_002213341.1;Name=WP_002213341.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=YPIP275_RS24275;product=50S ribosomal protein L15;protein_id=WP_002213341.1;transl_table=11 NZ_AAOS02000050.1 RefSeq gene 4731 6062 . + . ID=gene-YPIP275_RS24280;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=YPIP275_RS24280;old_locus_tag=YPIP275_2633 NZ_AAOS02000050.1 Protein Homology CDS 4731 6062 . + 0 ID=cds-WP_002213344.1;Parent=gene-YPIP275_RS24280;Dbxref=GenBank:WP_002213344.1;Name=WP_002213344.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=YPIP275_RS24280;product=preprotein translocase subunit SecY;protein_id=WP_002213344.1;transl_table=11 NZ_AAOS02000050.1 RefSeq gene 6096 6212 . + . ID=gene-YPIP275_RS24285;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS24285 NZ_AAOS02000050.1 Protein Homology CDS 6096 6212 . + 0 ID=cds-WP_002227352.1;Parent=gene-YPIP275_RS24285;Dbxref=GenBank:WP_002227352.1;Name=WP_002227352.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=YPIP275_RS24285;product=50S ribosomal protein L36;protein_id=WP_002227352.1;transl_table=11 NZ_AAOS02000050.1 RefSeq gene 6360 6716 . + . ID=gene-YPIP275_RS24290;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=YPIP275_RS24290;old_locus_tag=YPIP275_2634 NZ_AAOS02000050.1 Protein Homology CDS 6360 6716 . + 0 ID=cds-WP_002213346.1;Parent=gene-YPIP275_RS24290;Dbxref=GenBank:WP_002213346.1;Name=WP_002213346.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018356918.1;locus_tag=YPIP275_RS24290;product=30S ribosomal protein S13;protein_id=WP_002213346.1;transl_table=11 NZ_AAOS02000050.1 RefSeq gene 6733 7070 . + . ID=gene-YPIP275_RS24295;Name=rpsK;end_range=7070,.;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=YPIP275_RS24295;old_locus_tag=YPIP275_2635;partial=true NZ_AAOS02000050.1 Protein Homology CDS 6733 7070 . + 0 ID=cds-WP_002213347.1;Parent=gene-YPIP275_RS24295;Dbxref=GenBank:WP_002213347.1;Name=WP_002213347.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;end_range=7070,.;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=YPIP275_RS24295;partial=true;product=30S ribosomal protein S11;protein_id=WP_002213347.1;transl_table=11 ##sequence-region NZ_AAOS02000049.1 1 7184 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000049.1 RefSeq region 1 7184 . + . ID=NZ_AAOS02000049.1:1..7184;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000049.1 RefSeq gene 113 886 . - . ID=gene-YPIP275_RS24180;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS24180;old_locus_tag=YPIP275_0380 NZ_AAOS02000049.1 Protein Homology CDS 113 886 . - 0 ID=cds-WP_002217034.1;Parent=gene-YPIP275_RS24180;Dbxref=GenBank:WP_002217034.1;Name=WP_002217034.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303843.1;locus_tag=YPIP275_RS24180;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_002217034.1;transl_table=11 NZ_AAOS02000049.1 RefSeq gene 1005 1808 . + . ID=gene-YPIP275_RS24185;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=YPIP275_RS24185;old_locus_tag=YPIP275_0381 NZ_AAOS02000049.1 Protein Homology CDS 1005 1808 . + 0 ID=cds-WP_002213305.1;Parent=gene-YPIP275_RS24185;Dbxref=GenBank:WP_002213305.1;Name=WP_002213305.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311426.1;locus_tag=YPIP275_RS24185;product=inositol-1-monophosphatase;protein_id=WP_002213305.1;transl_table=11 NZ_AAOS02000049.1 RefSeq gene 2012 2470 . + . ID=gene-YPIP275_RS24190;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS24190;old_locus_tag=YPIP275_0382 NZ_AAOS02000049.1 Protein Homology CDS 2012 2470 . + 0 ID=cds-WP_002213775.1-4;Parent=gene-YPIP275_RS24190;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS24190;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000049.1 RefSeq gene 2617 3639 . - . ID=gene-YPIP275_RS24195;Name=YPIP275_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24195;old_locus_tag=YPIP275_0383 NZ_AAOS02000049.1 Protein Homology CDS 2617 3639 . - 0 ID=cds-WP_002213308.1;Parent=gene-YPIP275_RS24195;Dbxref=GenBank:WP_002213308.1;Name=WP_002213308.1;Ontology_term=GO:0035444,GO:0015099,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413859.1;locus_tag=YPIP275_RS24195;product=nickel/cobalt transporter;protein_id=WP_002213308.1;transl_table=11 NZ_AAOS02000049.1 RefSeq gene 3630 4304 . - . ID=gene-YPIP275_RS24200;Name=YPIP275_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24200;old_locus_tag=YPIP275_0384 NZ_AAOS02000049.1 Protein Homology CDS 3630 4304 . - 0 ID=cds-WP_002213310.1;Parent=gene-YPIP275_RS24200;Dbxref=GenBank:WP_002213310.1;Name=WP_002213310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192815.1;locus_tag=YPIP275_RS24200;product=DUF1007 family protein;protein_id=WP_002213310.1;transl_table=11 NZ_AAOS02000049.1 RefSeq gene 4446 5807 . + . ID=gene-YPIP275_RS24205;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=YPIP275_RS24205;old_locus_tag=YPIP275_0387 NZ_AAOS02000049.1 Protein Homology CDS 4446 5807 . + 0 ID=cds-WP_002213314.1;Parent=gene-YPIP275_RS24205;Dbxref=GenBank:WP_002213314.1;Name=WP_002213314.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413861.1;locus_tag=YPIP275_RS24205;product=stationary phase inducible protein CsiE;protein_id=WP_002213314.1;transl_table=11 NZ_AAOS02000049.1 RefSeq gene 5804 6961 . - . ID=gene-YPIP275_RS24210;Name=YPIP275_RS24210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24210;old_locus_tag=YPIP275_0386 NZ_AAOS02000049.1 Protein Homology CDS 5804 6961 . - 0 ID=cds-WP_002213316.1;Parent=gene-YPIP275_RS24210;Dbxref=GenBank:WP_002213316.1;Name=WP_002213316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906330.1;locus_tag=YPIP275_RS24210;product=3-phenylpropionate MFS transporter;protein_id=WP_002213316.1;transl_table=11 ##sequence-region NZ_AAOS02000048.1 1 7621 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000048.1 RefSeq region 1 7621 . + . ID=NZ_AAOS02000048.1:1..7621;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000048.1 RefSeq gene 112 309 . - . ID=gene-YPIP275_RS24125;Name=YPIP275_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24125 NZ_AAOS02000048.1 Protein Homology CDS 112 309 . - 0 ID=cds-WP_002211040.1-2;Parent=gene-YPIP275_RS24125;Dbxref=GenBank:WP_002211040.1;Name=WP_002211040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211040.1;locus_tag=YPIP275_RS24125;product=hypothetical protein;protein_id=WP_002211040.1;transl_table=11 NZ_AAOS02000048.1 RefSeq gene 506 754 . - . ID=gene-YPIP275_RS28190;Name=YPIP275_RS28190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28190 NZ_AAOS02000048.1 Protein Homology CDS 506 754 . - 0 ID=cds-WP_001399975.1;Parent=gene-YPIP275_RS28190;Dbxref=GenBank:WP_001399975.1;Name=WP_001399975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001419846.1;locus_tag=YPIP275_RS28190;product=hypothetical protein;protein_id=WP_001399975.1;transl_table=11 NZ_AAOS02000048.1 RefSeq gene 843 2087 . - . ID=gene-YPIP275_RS24135;Name=YPIP275_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24135 NZ_AAOS02000048.1 Protein Homology CDS 843 2087 . - 0 ID=cds-WP_000722136.1;Parent=gene-YPIP275_RS24135;Dbxref=GenBank:WP_000722136.1;Name=WP_000722136.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001388363.1;locus_tag=YPIP275_RS24135;product=type II secretion system protein GspD;protein_id=WP_000722136.1;transl_table=11 NZ_AAOS02000048.1 RefSeq gene 2087 3112 . - . ID=gene-YPIP275_RS24140;Name=YPIP275_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24140 NZ_AAOS02000048.1 Protein Homology CDS 2087 3112 . - 0 ID=cds-WP_002210570.1;Parent=gene-YPIP275_RS24140;Dbxref=GenBank:WP_002210570.1;Name=WP_002210570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001430025.1;locus_tag=YPIP275_RS24140;product=zonular occludens toxin family protein;protein_id=WP_002210570.1;transl_table=11 NZ_AAOS02000048.1 RefSeq gene 3116 3403 . - . ID=gene-YPIP275_RS24145;Name=YPIP275_RS24145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24145 NZ_AAOS02000048.1 Protein Homology CDS 3116 3403 . - 0 ID=cds-WP_000467041.1;Parent=gene-YPIP275_RS24145;Dbxref=GenBank:WP_000467041.1;Name=WP_000467041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000467082.1;locus_tag=YPIP275_RS24145;product=DUF2523 domain-containing protein;protein_id=WP_000467041.1;transl_table=11 NZ_AAOS02000048.1 RefSeq gene 3416 4978 . - . ID=gene-YPIP275_RS24150;Name=YPIP275_RS24150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24150 NZ_AAOS02000048.1 Protein Homology CDS 3416 4978 . - 0 ID=cds-WP_002222443.1;Parent=gene-YPIP275_RS24150;Dbxref=GenBank:WP_002222443.1;Name=WP_002222443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222443.1;locus_tag=YPIP275_RS24150;product=hypothetical protein;protein_id=WP_002222443.1;transl_table=11 NZ_AAOS02000048.1 RefSeq gene 5193 5426 . - . ID=gene-YPIP275_RS24155;Name=YPIP275_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24155 NZ_AAOS02000048.1 Protein Homology CDS 5193 5426 . - 0 ID=cds-WP_000473544.1;Parent=gene-YPIP275_RS24155;Dbxref=GenBank:WP_000473544.1;Name=WP_000473544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534187.1;locus_tag=YPIP275_RS24155;product=hypothetical protein;protein_id=WP_000473544.1;transl_table=11 NZ_AAOS02000048.1 RefSeq gene 5462 5713 . - . ID=gene-YPIP275_RS24160;Name=YPIP275_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24160 NZ_AAOS02000048.1 Protein Homology CDS 5462 5713 . - 0 ID=cds-WP_000381239.1;Parent=gene-YPIP275_RS24160;Dbxref=GenBank:WP_000381239.1;Name=WP_000381239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536107.1;locus_tag=YPIP275_RS24160;product=membrane protein;protein_id=WP_000381239.1;transl_table=11 NZ_AAOS02000048.1 RefSeq gene 5716 6033 . - . ID=gene-YPIP275_RS24165;Name=YPIP275_RS24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24165 NZ_AAOS02000048.1 Protein Homology CDS 5716 6033 . - 0 ID=cds-WP_000073835.1;Parent=gene-YPIP275_RS24165;Dbxref=GenBank:WP_000073835.1;Name=WP_000073835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000073833.1;locus_tag=YPIP275_RS24165;product=DNA-binding protein;protein_id=WP_000073835.1;transl_table=11 NZ_AAOS02000048.1 RefSeq gene 6045 7097 . - . ID=gene-YPIP275_RS24170;Name=YPIP275_RS24170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24170 NZ_AAOS02000048.1 Protein Homology CDS 6045 7097 . - 0 ID=cds-WP_000568107.1;Parent=gene-YPIP275_RS24170;Dbxref=GenBank:WP_000568107.1;Name=WP_000568107.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568107.1;locus_tag=YPIP275_RS24170;product=phage/plasmid replication protein%2C II/X family;protein_id=WP_000568107.1;transl_table=11 NZ_AAOS02000048.1 RefSeq gene 7269 7621 . + . ID=gene-YPIP275_RS24175;Name=YPIP275_RS24175;end_range=7621,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24175;partial=true NZ_AAOS02000048.1 Protein Homology CDS 7269 7621 . + 0 ID=cds-WP_002211041.1;Parent=gene-YPIP275_RS24175;Dbxref=GenBank:WP_002211041.1;Name=WP_002211041.1;Ontology_term=GO:0003677;end_range=7621,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608238.1;locus_tag=YPIP275_RS24175;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_002211041.1;transl_table=11 ##sequence-region NZ_AAOS02000047.1 1 9636 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000047.1 RefSeq region 1 9636 . + . ID=NZ_AAOS02000047.1:1..9636;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000047.1 RefSeq gene 38 1102 . - . ID=gene-YPIP275_RS24065;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=YPIP275_RS24065;old_locus_tag=YPIP275_4684 NZ_AAOS02000047.1 Protein Homology CDS 38 1102 . - 0 ID=cds-WP_002214164.1;Parent=gene-YPIP275_RS24065;Dbxref=GenBank:WP_002214164.1;Name=WP_002214164.1;gbkey=CDS;gene=repA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001293470.1;locus_tag=YPIP275_RS24065;product=replication protein RepA;protein_id=WP_002214164.1;transl_table=11 NZ_AAOS02000047.1 RefSeq gene 1847 2491 . + . ID=gene-YPIP275_RS24070;Name=YPIP275_RS24070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24070 NZ_AAOS02000047.1 Protein Homology CDS 1847 2491 . + 0 ID=cds-WP_002214160.1;Parent=gene-YPIP275_RS24070;Dbxref=GenBank:WP_002214160.1;Name=WP_002214160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110025.1;locus_tag=YPIP275_RS24070;product=hypothetical protein;protein_id=WP_002214160.1;transl_table=11 NZ_AAOS02000047.1 RefSeq gene 2851 3873 . - . ID=gene-YPIP275_RS24080;Name=YPIP275_RS24080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24080;old_locus_tag=YPIP275_4685 NZ_AAOS02000047.1 Protein Homology CDS 2851 3873 . - 0 ID=cds-WP_002213298.1;Parent=gene-YPIP275_RS24080;Dbxref=GenBank:WP_002213298.1;Name=WP_002213298.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016579699.1;locus_tag=YPIP275_RS24080;product=ABC transporter substrate-binding protein;protein_id=WP_002213298.1;transl_table=11 NZ_AAOS02000047.1 RefSeq gene 4289 5374 . + . ID=gene-YPIP275_RS24090;Name=YPIP275_RS24090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24090;old_locus_tag=YPIP275_4687 NZ_AAOS02000047.1 Protein Homology CDS 4289 5374 . + 0 ID=cds-WP_002213300.1;Parent=gene-YPIP275_RS24090;Dbxref=GenBank:WP_002213300.1;Name=WP_002213300.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220943.1;locus_tag=YPIP275_RS24090;product=metallophosphoesterase family protein;protein_id=WP_002213300.1;transl_table=11 NZ_AAOS02000047.1 RefSeq gene 5329 5595 . + . ID=gene-YPIP275_RS24095;Name=YPIP275_RS24095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24095 NZ_AAOS02000047.1 Protein Homology CDS 5329 5595 . + 0 ID=cds-WP_002214151.1;Parent=gene-YPIP275_RS24095;Dbxref=GenBank:WP_002214151.1;Name=WP_002214151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214151.1;locus_tag=YPIP275_RS24095;product=hypothetical protein;protein_id=WP_002214151.1;transl_table=11 NZ_AAOS02000047.1 RefSeq gene 5604 7520 . + . ID=gene-YPIP275_RS24100;Name=YPIP275_RS24100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24100;old_locus_tag=YPIP275_4688 NZ_AAOS02000047.1 Protein Homology CDS 5604 7520 . + 0 ID=cds-WP_002214148.1;Parent=gene-YPIP275_RS24100;Dbxref=GenBank:WP_002214148.1;Name=WP_002214148.1;Ontology_term=GO:0006302,GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;go_process=double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016051677.1;locus_tag=YPIP275_RS24100;product=AAA family ATPase;protein_id=WP_002214148.1;transl_table=11 NZ_AAOS02000047.1 RefSeq gene 7510 8256 . + . ID=gene-YPIP275_RS24105;Name=YPIP275_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24105;old_locus_tag=YPIP275_4689 NZ_AAOS02000047.1 Protein Homology CDS 7510 8256 . + 0 ID=cds-WP_002213303.1;Parent=gene-YPIP275_RS24105;Dbxref=GenBank:WP_002213303.1;Name=WP_002213303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011114035.1;locus_tag=YPIP275_RS24105;product=hypothetical protein;protein_id=WP_002213303.1;transl_table=11 NZ_AAOS02000047.1 RefSeq gene 8269 8838 . + . ID=gene-YPIP275_RS24110;Name=YPIP275_RS24110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24110;old_locus_tag=YPIP275_4690 NZ_AAOS02000047.1 Protein Homology CDS 8269 8838 . + 0 ID=cds-WP_002214145.1;Parent=gene-YPIP275_RS24110;Dbxref=GenBank:WP_002214145.1;Name=WP_002214145.1;Ontology_term=GO:0090304,GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220938.1;locus_tag=YPIP275_RS24110;product=RuvC family protein;protein_id=WP_002214145.1;transl_table=11 NZ_AAOS02000047.1 RefSeq gene 9047 9505 . + . ID=gene-YPIP275_RS24115;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS24115;old_locus_tag=YPIP275_4691 NZ_AAOS02000047.1 Protein Homology CDS 9047 9505 . + 0 ID=cds-WP_002213775.1-5;Parent=gene-YPIP275_RS24115;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS24115;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 ##sequence-region NZ_AAOS02000046.1 1 12405 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000046.1 RefSeq region 1 12405 . + . ID=NZ_AAOS02000046.1:1..12405;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000046.1 RefSeq gene 300 1706 . - . ID=gene-YPIP275_RS23995;Name=yopH;gbkey=Gene;gene=yopH;gene_biotype=protein_coding;locus_tag=YPIP275_RS23995;old_locus_tag=YPIP275_3911 NZ_AAOS02000046.1 Protein Homology CDS 300 1706 . - 0 ID=cds-WP_002213278.1;Parent=gene-YPIP275_RS23995;Dbxref=GenBank:WP_002213278.1;Name=WP_002213278.1;gbkey=CDS;gene=yopH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213278.1;locus_tag=YPIP275_RS23995;product=T3SS effector protein-tyrosine-phosphatase YopH;protein_id=WP_002213278.1;transl_table=11 NZ_AAOS02000046.1 RefSeq pseudogene 1989 2225 . - . ID=gene-YPIP275_RS24000;Name=YPIP275_RS24000;end_range=2225,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS24000;old_locus_tag=YPIP275_3912;partial=true;pseudo=true NZ_AAOS02000046.1 Protein Homology CDS 1989 2225 . - 0 ID=cds-YPIP275_RS24000;Parent=gene-YPIP275_RS24000;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2225,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000355324.1;locus_tag=YPIP275_RS24000;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_AAOS02000046.1 RefSeq pseudogene 2225 2803 . + . ID=gene-YPIP275_RS24005;Name=YPIP275_RS24005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS24005;old_locus_tag=YPIP275_3913;partial=true;pseudo=true;start_range=.,2225 NZ_AAOS02000046.1 Protein Homology CDS 2225 2803 . + 0 ID=cds-YPIP275_RS24005;Parent=gene-YPIP275_RS24005;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=YPIP275_RS24005;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2225;transl_table=11 NZ_AAOS02000046.1 RefSeq pseudogene 3068 3172 . - . ID=gene-YPIP275_RS29035;Name=YPIP275_RS29035;end_range=3172,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29035;partial=true;pseudo=true;start_range=.,3068 NZ_AAOS02000046.1 Protein Homology CDS 3068 3172 . - 0 ID=cds-YPIP275_RS29035;Parent=gene-YPIP275_RS29035;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3172,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513068.1;locus_tag=YPIP275_RS29035;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,3068;transl_table=11 NZ_AAOS02000046.1 RefSeq gene 3389 4255 . - . ID=gene-YPIP275_RS24010;Name=yopJ;gbkey=Gene;gene=yopJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS24010;old_locus_tag=YPIP275_3914 NZ_AAOS02000046.1 Protein Homology CDS 3389 4255 . - 0 ID=cds-WP_002213287.1;Parent=gene-YPIP275_RS24010;Dbxref=GenBank:WP_002213287.1;Name=WP_002213287.1;gbkey=CDS;gene=yopJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002225474.1;locus_tag=YPIP275_RS24010;product=type III secretion system effector acetyltransferase YopJ;protein_id=WP_002213287.1;transl_table=11 NZ_AAOS02000046.1 RefSeq gene 4651 6849 . - . ID=gene-YPIP275_RS24015;Name=yopO;gbkey=Gene;gene=yopO;gene_biotype=protein_coding;gene_synonym=ypkA;locus_tag=YPIP275_RS24015;old_locus_tag=YPIP275_3916 NZ_AAOS02000046.1 Protein Homology CDS 4651 6849 . - 0 ID=cds-WP_002213290.1;Parent=gene-YPIP275_RS24015;Dbxref=GenBank:WP_002213290.1;Name=WP_002213290.1;gbkey=CDS;gene=yopO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191359.1;locus_tag=YPIP275_RS24015;product=type III secretion system effector protein kinase YopO/YpkA;protein_id=WP_002213290.1;transl_table=11 NZ_AAOS02000046.1 RefSeq gene 6857 7306 . - . ID=gene-YPIP275_RS24020;Name=YPIP275_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24020;old_locus_tag=YPIP275_3917 NZ_AAOS02000046.1 Protein Homology CDS 6857 7306 . - 0 ID=cds-WP_002229809.1;Parent=gene-YPIP275_RS24020;Dbxref=GenBank:WP_002229809.1;Name=WP_002229809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229809.1;locus_tag=YPIP275_RS24020;product=type III secretion system chaperone;protein_id=WP_002229809.1;transl_table=11 NZ_AAOS02000046.1 RefSeq pseudogene 7562 7898 . - . ID=gene-YPIP275_RS24025;Name=YPIP275_RS24025;end_range=7898,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS24025;old_locus_tag=YPIP275_3918;partial=true;pseudo=true NZ_AAOS02000046.1 Protein Homology CDS 7562 7898 . - 0 ID=cds-YPIP275_RS24025;Parent=gene-YPIP275_RS24025;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;end_range=7898,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=YPIP275_RS24025;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_AAOS02000046.1 RefSeq pseudogene 7880 8058 . - . ID=gene-YPIP275_RS28170;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=YPIP275_RS28170;partial=true;pseudo=true;start_range=.,7880 NZ_AAOS02000046.1 Protein Homology CDS 7880 8058 . - 0 ID=cds-YPIP275_RS28170;Parent=gene-YPIP275_RS28170;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957248.1;locus_tag=YPIP275_RS28170;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;start_range=.,7880;transl_table=11 NZ_AAOS02000046.1 RefSeq gene 8052 8291 . - . ID=gene-YPIP275_RS24030;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS24030;old_locus_tag=YPIP275_3919 NZ_AAOS02000046.1 Protein Homology CDS 8052 8291 . - 0 ID=cds-WP_002213291.1;Parent=gene-YPIP275_RS24030;Dbxref=GenBank:WP_002213291.1;Name=WP_002213291.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: protein motif:HMM:NF047593.1;locus_tag=YPIP275_RS24030;product=IS66 family insertion sequence element accessory protein TnpA;protein_id=WP_002213291.1;transl_table=11 NZ_AAOS02000046.1 RefSeq pseudogene 8707 8841 . - . ID=gene-YPIP275_RS29385;Name=YPIP275_RS29385;end_range=8841,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29385;partial=true;pseudo=true NZ_AAOS02000046.1 Protein Homology CDS 8707 8841 . - 0 ID=cds-YPIP275_RS29385;Parent=gene-YPIP275_RS29385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=8841,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF054898.1;locus_tag=YPIP275_RS29385;partial=true;product=replication-associated protein RepA4;pseudo=true;transl_table=11 NZ_AAOS02000046.1 RefSeq gene 9464 10330 . - . ID=gene-YPIP275_RS24035;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=YPIP275_RS24035;old_locus_tag=YPIP275_3920 NZ_AAOS02000046.1 Protein Homology CDS 9464 10330 . - 0 ID=cds-WP_002225475.1;Parent=gene-YPIP275_RS24035;Dbxref=GenBank:WP_002225475.1;Name=WP_002225475.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002225475.1;locus_tag=YPIP275_RS24035;product=incFII family plasmid replication initiator RepA;protein_id=WP_002225475.1;transl_table=11 NZ_AAOS02000046.1 RefSeq gene 10323 10403 . - . ID=gene-YPIP275_RS24040;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=YPIP275_RS24040 NZ_AAOS02000046.1 Protein Homology CDS 10323 10403 . - 0 ID=cds-WP_202914085.1;Parent=gene-YPIP275_RS24040;Dbxref=GenBank:WP_202914085.1;Name=WP_202914085.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: protein motif:HMM:TIGR03475.1;locus_tag=YPIP275_RS24040;product=RepA leader peptide Tap;protein_id=WP_202914085.1;transl_table=11 NZ_AAOS02000046.1 RefSeq gene 10639 10893 . - . ID=gene-YPIP275_RS24045;Name=YPIP275_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS24045 NZ_AAOS02000046.1 Protein Homology CDS 10639 10893 . - 0 ID=cds-WP_002229817.1;Parent=gene-YPIP275_RS24045;Dbxref=GenBank:WP_002229817.1;Name=WP_002229817.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229817.1;locus_tag=YPIP275_RS24045;product=replication regulatory protein RepA;protein_id=WP_002229817.1;transl_table=11 NZ_AAOS02000046.1 RefSeq pseudogene 11031 11279 . - . ID=gene-YPIP275_RS24050;Name=YPIP275_RS24050;end_range=11279,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS24050;partial=true;pseudo=true NZ_AAOS02000046.1 Protein Homology CDS 11031 11279 . - 0 ID=cds-YPIP275_RS24050;Parent=gene-YPIP275_RS24050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=11279,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001194258.1;locus_tag=YPIP275_RS24050;partial=true;product=phospholipase D-like domain-containing protein;pseudo=true;transl_table=11 NZ_AAOS02000046.1 RefSeq pseudogene 11423 11626 . + . ID=gene-YPIP275_RS28180;Name=YPIP275_RS28180;end_range=11626,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28180;partial=true;pseudo=true NZ_AAOS02000046.1 Protein Homology CDS 11423 11626 . + 0 ID=cds-YPIP275_RS28180;Parent=gene-YPIP275_RS28180;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015074;end_range=11626,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012870.7;locus_tag=YPIP275_RS28180;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_AAOS02000046.1 RefSeq gene 11696 12103 . - . ID=gene-YPIP275_RS29310;Name=YPIP275_RS29310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29310;old_locus_tag=YPIP275_3922 NZ_AAOS02000046.1 Protein Homology CDS 11696 12103 . - 0 ID=cds-WP_002213294.1;Parent=gene-YPIP275_RS29310;Dbxref=GenBank:WP_002213294.1;Name=WP_002213294.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024673.7;locus_tag=YPIP275_RS29310;product=IS3 family transposase;protein_id=WP_002213294.1;transl_table=11 NZ_AAOS02000046.1 RefSeq gene 12127 12405 . - . ID=gene-YPIP275_RS29315;Name=YPIP275_RS29315;end_range=12405,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29315;old_locus_tag=YPIP275_3923;partial=true NZ_AAOS02000046.1 Protein Homology CDS 12127 12405 . - 0 ID=cds-WP_002213295.1;Parent=gene-YPIP275_RS29315;Dbxref=GenBank:WP_002213295.1;Name=WP_002213295.1;end_range=12405,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013677.7;locus_tag=YPIP275_RS29315;partial=true;product=IS3 family transposase;protein_id=WP_002213295.1;transl_table=11 ##sequence-region NZ_AAOS02000045.1 1 12732 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000045.1 RefSeq region 1 12732 . + . ID=NZ_AAOS02000045.1:1..12732;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000045.1 RefSeq pseudogene 1 731 . - . ID=gene-YPIP275_RS29030;Name=YPIP275_RS29030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29030;partial=true;pseudo=true;start_range=.,1 NZ_AAOS02000045.1 Protein Homology CDS 1 731 . - 0 ID=cds-YPIP275_RS29030;Parent=gene-YPIP275_RS29030;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558235.1;locus_tag=YPIP275_RS29030;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_AAOS02000045.1 RefSeq gene 903 1361 . - . ID=gene-YPIP275_RS23910;Name=YPIP275_RS23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23910;old_locus_tag=YPIP275_3738 NZ_AAOS02000045.1 Protein Homology CDS 903 1361 . - 0 ID=cds-WP_002213246.1;Parent=gene-YPIP275_RS23910;Dbxref=GenBank:WP_002213246.1;Name=WP_002213246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213246.1;locus_tag=YPIP275_RS23910;product=hypothetical protein;protein_id=WP_002213246.1;transl_table=11 NZ_AAOS02000045.1 RefSeq pseudogene 1430 1806 . + . ID=gene-YPIP275_RS23915;Name=YPIP275_RS23915;end_range=1806,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23915;partial=true;pseudo=true NZ_AAOS02000045.1 Protein Homology CDS 1430 1806 . + 0 ID=cds-YPIP275_RS23915;Parent=gene-YPIP275_RS23915;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1806,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558235.1;locus_tag=YPIP275_RS23915;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_AAOS02000045.1 RefSeq pseudogene 1782 1955 . - . ID=gene-YPIP275_RS23920;Name=YPIP275_RS23920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23920;partial=true;pseudo=true;start_range=.,1782 NZ_AAOS02000045.1 Protein Homology CDS 1782 1955 . - 0 ID=cds-YPIP275_RS23920;Parent=gene-YPIP275_RS23920;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013749484.1;locus_tag=YPIP275_RS23920;partial=true;product=EamA family transporter;pseudo=true;start_range=.,1782;transl_table=11 NZ_AAOS02000045.1 RefSeq gene 2025 3179 . - . ID=gene-YPIP275_RS28155;Name=YPIP275_RS28155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28155;old_locus_tag=YPIP275_3741 NZ_AAOS02000045.1 Protein Homology CDS 2025 3179 . - 0 ID=cds-WP_227002854.1;Parent=gene-YPIP275_RS28155;Dbxref=GenBank:WP_227002854.1;Name=WP_227002854.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033478.1;locus_tag=YPIP275_RS28155;product=YadA-like family protein;protein_id=WP_227002854.1;transl_table=11 NZ_AAOS02000045.1 RefSeq gene 3077 3328 . - . ID=gene-YPIP275_RS23930;Name=YPIP275_RS23930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23930 NZ_AAOS02000045.1 Protein Homology CDS 3077 3328 . - 0 ID=cds-WP_002356450.1;Parent=gene-YPIP275_RS23930;Dbxref=GenBank:WP_002356450.1;Name=WP_002356450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356450.1;locus_tag=YPIP275_RS23930;product=hypothetical protein;protein_id=WP_002356450.1;transl_table=11 NZ_AAOS02000045.1 RefSeq pseudogene 3934 4272 . + . ID=gene-YPIP275_RS23935;Name=YPIP275_RS23935;end_range=4272,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23935;old_locus_tag=YPIP275_3744;partial=true;pseudo=true;start_range=.,3934 NZ_AAOS02000045.1 Protein Homology CDS 3934 4272 . + 0 ID=cds-YPIP275_RS23935;Parent=gene-YPIP275_RS23935;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4272,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611491.1;locus_tag=YPIP275_RS23935;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,3934;transl_table=11 NZ_AAOS02000045.1 RefSeq gene 4311 6626 . - . ID=gene-YPIP275_RS23940;Name=YPIP275_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23940;old_locus_tag=YPIP275_3743 NZ_AAOS02000045.1 Protein Homology CDS 4311 6626 . - 0 ID=cds-WP_002213256.1;Parent=gene-YPIP275_RS23940;Dbxref=GenBank:WP_002213256.1;Name=WP_002213256.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611787.1;locus_tag=YPIP275_RS23940;product=Tn3 family transposase;protein_id=WP_002213256.1;transl_table=11 NZ_AAOS02000045.1 RefSeq gene 6790 7341 . + . ID=gene-YPIP275_RS23945;Name=YPIP275_RS23945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23945;old_locus_tag=YPIP275_3745 NZ_AAOS02000045.1 Protein Homology CDS 6790 7341 . + 0 ID=cds-WP_002213258.1;Parent=gene-YPIP275_RS23945;Dbxref=GenBank:WP_002213258.1;Name=WP_002213258.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012228742.1;locus_tag=YPIP275_RS23945;product=recombinase family protein;protein_id=WP_002213258.1;transl_table=11 NZ_AAOS02000045.1 RefSeq gene 7360 7824 . + . ID=gene-YPIP275_RS23950;Name=YPIP275_RS23950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23950 NZ_AAOS02000045.1 Protein Homology CDS 7360 7824 . + 0 ID=cds-WP_002224338.1;Parent=gene-YPIP275_RS23950;Dbxref=GenBank:WP_002224338.1;Name=WP_002224338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414143.1;locus_tag=YPIP275_RS23950;product=hypothetical protein;protein_id=WP_002224338.1;transl_table=11 NZ_AAOS02000045.1 RefSeq gene 7963 8292 . + . ID=gene-YPIP275_RS23955;Name=YPIP275_RS23955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23955 NZ_AAOS02000045.1 Protein Homology CDS 7963 8292 . + 0 ID=cds-WP_002229829.1;Parent=gene-YPIP275_RS23955;Dbxref=GenBank:WP_002229829.1;Name=WP_002229829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229829.1;locus_tag=YPIP275_RS23955;product=hypothetical protein;protein_id=WP_002229829.1;transl_table=11 NZ_AAOS02000045.1 RefSeq gene 8392 9491 . + . ID=gene-YPIP275_RS23965;Name=YPIP275_RS23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23965;old_locus_tag=YPIP275_3747 NZ_AAOS02000045.1 Protein Homology CDS 8392 8653 . + 0 ID=cds-WP_086016640.1;Parent=gene-YPIP275_RS23965;Dbxref=GenBank:WP_086016640.1;Name=WP_086016640.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=YPIP275_RS23965;product=IS3-like element ISYpe1 family transposase;protein_id=WP_086016640.1;transl_table=11 NZ_AAOS02000045.1 Protein Homology CDS 8653 9491 . + 2 ID=cds-WP_086016640.1;Parent=gene-YPIP275_RS23965;Dbxref=GenBank:WP_086016640.1;Name=WP_086016640.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=YPIP275_RS23965;product=IS3-like element ISYpe1 family transposase;protein_id=WP_086016640.1;transl_table=11 NZ_AAOS02000045.1 RefSeq gene 9639 10064 . - . ID=gene-YPIP275_RS23970;Name=sycH;gbkey=Gene;gene=sycH;gene_biotype=protein_coding;locus_tag=YPIP275_RS23970;old_locus_tag=YPIP275_3748 NZ_AAOS02000045.1 Protein Homology CDS 9639 10064 . - 0 ID=cds-WP_002213267.1;Parent=gene-YPIP275_RS23970;Dbxref=GenBank:WP_002213267.1;Name=WP_002213267.1;gbkey=CDS;gene=sycH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213267.1;locus_tag=YPIP275_RS23970;product=type III secretion system chaperone SycH;protein_id=WP_002213267.1;transl_table=11 NZ_AAOS02000045.1 RefSeq pseudogene 10440 10838 . - . ID=gene-YPIP275_RS23975;Name=YPIP275_RS23975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23975;old_locus_tag=YPIP275_3749;partial=true;pseudo=true;start_range=.,10440 NZ_AAOS02000045.1 Protein Homology CDS 10440 10838 . - 0 ID=cds-YPIP275_RS23975;Parent=gene-YPIP275_RS23975;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000544830.1;locus_tag=YPIP275_RS23975;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,10440;transl_table=11 NZ_AAOS02000045.1 RefSeq pseudogene 10838 11764 . - . ID=gene-YPIP275_RS23980;Name=istA;end_range=11764,.;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=YPIP275_RS23980;old_locus_tag=YPIP275_3750;partial=true;pseudo=true NZ_AAOS02000045.1 Protein Homology CDS 10838 11764 . - 0 ID=cds-YPIP275_RS23980;Parent=gene-YPIP275_RS23980;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=11764,.;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952428.1;locus_tag=YPIP275_RS23980;partial=true;product=IS21 family transposase;pseudo=true;transl_table=11 NZ_AAOS02000045.1 RefSeq pseudogene 11853 12732 . + . ID=gene-YPIP275_RS23985;Name=istA;end_range=12732,.;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=YPIP275_RS23985;old_locus_tag=YPIP275_3751;partial=true;pseudo=true NZ_AAOS02000045.1 Protein Homology CDS 11853 12732 . + 0 ID=cds-YPIP275_RS23985;Parent=gene-YPIP275_RS23985;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=12732,.;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS23985;partial=true;product=IS21-like element IS100 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_AAOS02000044.1 1 13999 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000044.1 RefSeq region 1 13999 . + . ID=NZ_AAOS02000044.1:1..13999;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000044.1 RefSeq gene 80 784 . + . ID=gene-YPIP275_RS23820;Name=YPIP275_RS23820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23820;old_locus_tag=YPIP275_2637 NZ_AAOS02000044.1 Protein Homology CDS 80 784 . + 0 ID=cds-WP_001067855.1-11;Parent=gene-YPIP275_RS23820;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=YPIP275_RS23820;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_AAOS02000044.1 RefSeq pseudogene 838 1491 . - . ID=gene-YPIP275_RS23825;Name=YPIP275_RS23825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23825;partial=true;pseudo=true;start_range=.,838 NZ_AAOS02000044.1 Protein Homology CDS 838 1491 . - 0 ID=cds-YPIP275_RS23825;Parent=gene-YPIP275_RS23825;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226817.1;locus_tag=YPIP275_RS23825;partial=true;product=TIM barrel protein;pseudo=true;start_range=.,838;transl_table=11 NZ_AAOS02000044.1 RefSeq gene 1496 2116 . - . ID=gene-YPIP275_RS23830;Name=otnC;gbkey=Gene;gene=otnC;gene_biotype=protein_coding;locus_tag=YPIP275_RS23830;old_locus_tag=YPIP275_2639 NZ_AAOS02000044.1 Protein Homology CDS 1496 2116 . - 0 ID=cds-WP_002210516.1-2;Parent=gene-YPIP275_RS23830;Dbxref=GenBank:WP_002210516.1;Name=WP_002210516.1;Ontology_term=GO:0005996,GO:0016829;gbkey=CDS;gene=otnC;go_function=lyase activity|0016829||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226818.1;locus_tag=YPIP275_RS23830;product=3-oxo-tetronate 4-phosphate decarboxylase;protein_id=WP_002210516.1;transl_table=11 NZ_AAOS02000044.1 RefSeq gene 2109 3374 . - . ID=gene-YPIP275_RS23835;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=YPIP275_RS23835;old_locus_tag=YPIP275_2640 NZ_AAOS02000044.1 Protein Homology CDS 2109 3374 . - 0 ID=cds-WP_002210515.1-2;Parent=gene-YPIP275_RS23835;Dbxref=GenBank:WP_002210515.1;Name=WP_002210515.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226819.1;locus_tag=YPIP275_RS23835;product=3-oxo-tetronate kinase;protein_id=WP_002210515.1;transl_table=11 NZ_AAOS02000044.1 RefSeq gene 3386 4288 . - . ID=gene-YPIP275_RS23840;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=YPIP275_RS23840;old_locus_tag=YPIP275_2641 NZ_AAOS02000044.1 Protein Homology CDS 3386 4288 . - 0 ID=cds-WP_002210514.1-2;Parent=gene-YPIP275_RS23840;Dbxref=GenBank:WP_002210514.1;Name=WP_002210514.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226820.1;locus_tag=YPIP275_RS23840;product=L-threonate dehydrogenase;protein_id=WP_002210514.1;transl_table=11 NZ_AAOS02000044.1 RefSeq gene 4549 5310 . + . ID=gene-YPIP275_RS23845;Name=YPIP275_RS23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23845;old_locus_tag=YPIP275_2642 NZ_AAOS02000044.1 Protein Homology CDS 4549 5310 . + 0 ID=cds-WP_002210513.1-2;Parent=gene-YPIP275_RS23845;Dbxref=GenBank:WP_002210513.1;Name=WP_002210513.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226821.1;locus_tag=YPIP275_RS23845;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_002210513.1;transl_table=11 NZ_AAOS02000044.1 RefSeq gene 5331 6191 . - . ID=gene-YPIP275_RS23850;Name=YPIP275_RS23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23850;old_locus_tag=YPIP275_2643 NZ_AAOS02000044.1 Protein Homology CDS 5331 6191 . - 0 ID=cds-WP_001620095.1-2;Parent=gene-YPIP275_RS23850;Dbxref=GenBank:WP_001620095.1;Name=WP_001620095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001620095.1;locus_tag=YPIP275_RS23850;product=broad-spectrum class A beta-lactamase SHV-1;protein_id=WP_001620095.1;transl_table=11 NZ_AAOS02000044.1 RefSeq gene 6489 6749 . + . ID=gene-YPIP275_RS23855;Name=YPIP275_RS23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23855;old_locus_tag=YPIP275_2644 NZ_AAOS02000044.1 Protein Homology CDS 6489 6749 . + 0 ID=cds-WP_001620096.1-2;Parent=gene-YPIP275_RS23855;Dbxref=GenBank:WP_001620096.1;Name=WP_001620096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904006.1;locus_tag=YPIP275_RS23855;product=hypothetical protein;protein_id=WP_001620096.1;transl_table=11 NZ_AAOS02000044.1 RefSeq gene 6836 7924 . + . ID=gene-YPIP275_RS23860;Name=YPIP275_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23860;old_locus_tag=YPIP275_2645 NZ_AAOS02000044.1 Protein Homology CDS 6836 7924 . + 0 ID=cds-WP_001620097.1-2;Parent=gene-YPIP275_RS23860;Dbxref=GenBank:WP_001620097.1;Name=WP_001620097.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226824.1;locus_tag=YPIP275_RS23860;product=AAA family ATPase;protein_id=WP_001620097.1;transl_table=11 NZ_AAOS02000044.1 RefSeq pseudogene 7955 8842 . - . ID=gene-YPIP275_RS23865;Name=YPIP275_RS23865;end_range=8842,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23865;old_locus_tag=YPIP275_2646;partial=true;pseudo=true NZ_AAOS02000044.1 Protein Homology CDS 7955 8842 . - 0 ID=cds-YPIP275_RS23865;Parent=gene-YPIP275_RS23865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008643,GO:0005351,GO:0016020;end_range=8842,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151612.1;locus_tag=YPIP275_RS23865;partial=true;product=oligosaccharide MFS transporter;pseudo=true;transl_table=11 NZ_AAOS02000044.1 RefSeq gene 8897 9601 . + . ID=gene-YPIP275_RS23870;Name=YPIP275_RS23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23870;old_locus_tag=YPIP275_2647 NZ_AAOS02000044.1 Protein Homology CDS 8897 9601 . + 0 ID=cds-WP_001067855.1-12;Parent=gene-YPIP275_RS23870;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=YPIP275_RS23870;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_AAOS02000044.1 RefSeq pseudogene 9647 10069 . - . ID=gene-YPIP275_RS23875;Name=YPIP275_RS23875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23875;old_locus_tag=YPIP275_2648;partial=true;pseudo=true;start_range=.,9647 NZ_AAOS02000044.1 Protein Homology CDS 9647 10069 . - 0 ID=cds-YPIP275_RS23875;Parent=gene-YPIP275_RS23875;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827456.1;locus_tag=YPIP275_RS23875;partial=true;product=alpha/beta hydrolase-fold protein;pseudo=true;start_range=.,9647;transl_table=11 NZ_AAOS02000044.1 RefSeq gene 10091 11200 . - . ID=gene-YPIP275_RS23880;Name=YPIP275_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23880;old_locus_tag=YPIP275_2649 NZ_AAOS02000044.1 Protein Homology CDS 10091 11200 . - 0 ID=cds-WP_000842134.1-2;Parent=gene-YPIP275_RS23880;Dbxref=GenBank:WP_000842134.1;Name=WP_000842134.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308438.1;locus_tag=YPIP275_RS23880;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_000842134.1;transl_table=11 NZ_AAOS02000044.1 RefSeq gene 11295 12479 . - . ID=gene-YPIP275_RS23885;Name=tet(D);gbkey=Gene;gene=tet(D);gene_biotype=protein_coding;locus_tag=YPIP275_RS23885;old_locus_tag=YPIP275_2650 NZ_AAOS02000044.1 Protein Homology CDS 11295 12479 . - 0 ID=cds-WP_001039466.1-2;Parent=gene-YPIP275_RS23885;Dbxref=GenBank:WP_001039466.1;Name=WP_001039466.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(D);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001039466.1;locus_tag=YPIP275_RS23885;product=tetracycline efflux MFS transporter Tet(D);protein_id=WP_001039466.1;transl_table=11 NZ_AAOS02000044.1 RefSeq gene 12575 13231 . + . ID=gene-YPIP275_RS23890;Name=tetR(D);gbkey=Gene;gene=tetR(D);gene_biotype=protein_coding;locus_tag=YPIP275_RS23890;old_locus_tag=YPIP275_2651 NZ_AAOS02000044.1 Protein Homology CDS 12575 13231 . + 0 ID=cds-WP_000113282.1-2;Parent=gene-YPIP275_RS23890;Dbxref=GenBank:WP_000113282.1;Name=WP_000113282.1;gbkey=CDS;gene=tetR(D);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113282.1;locus_tag=YPIP275_RS23890;product=tetracycline resistance transcriptional repressor TetR(D);protein_id=WP_000113282.1;transl_table=11 NZ_AAOS02000044.1 RefSeq gene 13243 13947 . + . ID=gene-YPIP275_RS23895;Name=YPIP275_RS23895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23895;old_locus_tag=YPIP275_2652 NZ_AAOS02000044.1 Protein Homology CDS 13243 13947 . + 0 ID=cds-WP_001067855.1-13;Parent=gene-YPIP275_RS23895;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=YPIP275_RS23895;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 ##sequence-region NZ_AAOS02000043.1 1 20922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000043.1 RefSeq region 1 20922 . + . ID=NZ_AAOS02000043.1:1..20922;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000043.1 RefSeq gene 1 852 . - . ID=gene-YPIP275_RS23645;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS23645;old_locus_tag=YPIP275_1510;partial=true;start_range=.,1 NZ_AAOS02000043.1 Protein Homology CDS 1 852 . - 0 ID=cds-WP_043940369.1;Parent=gene-YPIP275_RS23645;Dbxref=GenBank:WP_043940369.1;Name=WP_043940369.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS23645;partial=true;product=IS21-like element IS100 family transposase;protein_id=WP_043940369.1;start_range=.,1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 1330 1515 . + . ID=gene-YPIP275_RS23660;Name=YPIP275_RS23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23660 NZ_AAOS02000043.1 Protein Homology CDS 1330 1515 . + 0 ID=cds-WP_002215428.1;Parent=gene-YPIP275_RS23660;Dbxref=GenBank:WP_002215428.1;Name=WP_002215428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215428.1;locus_tag=YPIP275_RS23660;product=hypothetical protein;protein_id=WP_002215428.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 1531 1755 . + . ID=gene-YPIP275_RS23665;Name=YPIP275_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23665;old_locus_tag=YPIP275_1513 NZ_AAOS02000043.1 Protein Homology CDS 1531 1755 . + 0 ID=cds-WP_002213183.1;Parent=gene-YPIP275_RS23665;Dbxref=GenBank:WP_002213183.1;Name=WP_002213183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213183.1;locus_tag=YPIP275_RS23665;product=hypothetical protein;protein_id=WP_002213183.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 1765 2106 . - . ID=gene-YPIP275_RS29305;Name=YPIP275_RS29305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29305 NZ_AAOS02000043.1 Protein Homology CDS 1765 2106 . - 0 ID=cds-WP_002228531.1;Parent=gene-YPIP275_RS29305;Dbxref=GenBank:WP_002228531.1;Name=WP_002228531.1;Ontology_term=GO:0055085,GO:0005524,GO:0022857,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231175.1;locus_tag=YPIP275_RS29305;product=TOBE domain-containing protein;protein_id=WP_002228531.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 1992 2882 . - . ID=gene-YPIP275_RS23675;Name=YPIP275_RS23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23675;old_locus_tag=YPIP275_1515 NZ_AAOS02000043.1 Protein Homology CDS 1992 2882 . - 0 ID=cds-WP_002215425.1;Parent=gene-YPIP275_RS23675;Dbxref=GenBank:WP_002215425.1;Name=WP_002215425.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906239.1;locus_tag=YPIP275_RS23675;product=ABC transporter ATP-binding protein;protein_id=WP_002215425.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 2907 3734 . - . ID=gene-YPIP275_RS23680;Name=YPIP275_RS23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23680;old_locus_tag=YPIP275_1516 NZ_AAOS02000043.1 Protein Homology CDS 2907 3734 . - 0 ID=cds-WP_002213186.1;Parent=gene-YPIP275_RS23680;Dbxref=GenBank:WP_002213186.1;Name=WP_002213186.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213186.1;locus_tag=YPIP275_RS23680;product=carbohydrate ABC transporter permease;protein_id=WP_002213186.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 3727 4587 . - . ID=gene-YPIP275_RS23685;Name=YPIP275_RS23685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23685;old_locus_tag=YPIP275_1517 NZ_AAOS02000043.1 Protein Homology CDS 3727 4587 . - 0 ID=cds-WP_002213188.1;Parent=gene-YPIP275_RS23685;Dbxref=GenBank:WP_002213188.1;Name=WP_002213188.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229553.1;locus_tag=YPIP275_RS23685;product=carbohydrate ABC transporter permease;protein_id=WP_002213188.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 4654 5922 . - . ID=gene-YPIP275_RS23690;Name=YPIP275_RS23690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23690;old_locus_tag=YPIP275_1518 NZ_AAOS02000043.1 Protein Homology CDS 4654 5922 . - 0 ID=cds-WP_002213190.1;Parent=gene-YPIP275_RS23690;Dbxref=GenBank:WP_002213190.1;Name=WP_002213190.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105195.1;locus_tag=YPIP275_RS23690;product=ABC transporter substrate-binding protein;protein_id=WP_002213190.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 5952 6965 . - . ID=gene-YPIP275_RS23695;Name=YPIP275_RS23695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23695;old_locus_tag=YPIP275_1519 NZ_AAOS02000043.1 Protein Homology CDS 5952 6965 . - 0 ID=cds-WP_002213192.1;Parent=gene-YPIP275_RS23695;Dbxref=GenBank:WP_002213192.1;Name=WP_002213192.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213192.1;locus_tag=YPIP275_RS23695;product=Gfo/Idh/MocA family protein;protein_id=WP_002213192.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 7633 8430 . - . ID=gene-YPIP275_RS23705;Name=YPIP275_RS23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23705;old_locus_tag=YPIP275_1522 NZ_AAOS02000043.1 Protein Homology CDS 7633 8430 . - 0 ID=cds-WP_002213201.1;Parent=gene-YPIP275_RS23705;Dbxref=GenBank:WP_002213201.1;Name=WP_002213201.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213201.1;locus_tag=YPIP275_RS23705;product=GntR family transcriptional regulator;protein_id=WP_002213201.1;transl_table=11 NZ_AAOS02000043.1 RefSeq pseudogene 8522 8721 . - . ID=gene-YPIP275_RS29015;Name=YPIP275_RS29015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29015;partial=true;pseudo=true;start_range=.,8522 NZ_AAOS02000043.1 Protein Homology CDS 8522 8721 . - 0 ID=cds-YPIP275_RS29015;Parent=gene-YPIP275_RS29015;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558178.1;locus_tag=YPIP275_RS29015;partial=true;product=transposase;pseudo=true;start_range=.,8522;transl_table=11 NZ_AAOS02000043.1 RefSeq pseudogene 8775 9101 . - . ID=gene-YPIP275_RS28135;Name=YPIP275_RS28135;end_range=9101,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28135;partial=true;pseudo=true NZ_AAOS02000043.1 Protein Homology CDS 8775 9101 . - 0 ID=cds-YPIP275_RS28135;Parent=gene-YPIP275_RS28135;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=9101,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611482.1;locus_tag=YPIP275_RS28135;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 9399 9833 . + . ID=gene-YPIP275_RS23715;Name=YPIP275_RS23715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23715;old_locus_tag=YPIP275_1523 NZ_AAOS02000043.1 Protein Homology CDS 9399 9833 . + 0 ID=cds-WP_002215417.1;Parent=gene-YPIP275_RS23715;Dbxref=GenBank:WP_002215417.1;Name=WP_002215417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215417.1;locus_tag=YPIP275_RS23715;product=hypothetical protein;protein_id=WP_002215417.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 9845 10414 . + . ID=gene-YPIP275_RS23720;Name=YPIP275_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23720;old_locus_tag=YPIP275_1524 NZ_AAOS02000043.1 Protein Homology CDS 9845 10414 . + 0 ID=cds-WP_002213205.1;Parent=gene-YPIP275_RS23720;Dbxref=GenBank:WP_002213205.1;Name=WP_002213205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304155.1;locus_tag=YPIP275_RS23720;product=hypothetical protein;protein_id=WP_002213205.1;transl_table=11 NZ_AAOS02000043.1 RefSeq pseudogene 10832 12030 . - . ID=gene-YPIP275_RS23725;Name=YPIP275_RS23725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23725;old_locus_tag=YPIP275_1525;pseudo=true NZ_AAOS02000043.1 Protein Homology CDS 10832 12030 . - 0 ID=cds-YPIP275_RS23725;Parent=gene-YPIP275_RS23725;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS23725;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 12078 13154 . - . ID=gene-YPIP275_RS23730;Name=YPIP275_RS23730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23730;old_locus_tag=YPIP275_1526 NZ_AAOS02000043.1 Protein Homology CDS 12078 13154 . - 0 ID=cds-WP_002213208.1;Parent=gene-YPIP275_RS23730;Dbxref=GenBank:WP_002213208.1;Name=WP_002213208.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213208.1;locus_tag=YPIP275_RS23730;product=toll/interleukin-1 receptor domain-containing protein;protein_id=WP_002213208.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 13220 13510 . - . ID=gene-YPIP275_RS23735;Name=YPIP275_RS23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23735;old_locus_tag=YPIP275_1527 NZ_AAOS02000043.1 Protein Homology CDS 13220 13510 . - 0 ID=cds-WP_002213209.1;Parent=gene-YPIP275_RS23735;Dbxref=GenBank:WP_002213209.1;Name=WP_002213209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005161435.1;locus_tag=YPIP275_RS23735;product=BrnA antitoxin family protein;protein_id=WP_002213209.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 13491 13763 . - . ID=gene-YPIP275_RS23740;Name=YPIP275_RS23740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23740;old_locus_tag=YPIP275_1528 NZ_AAOS02000043.1 Protein Homology CDS 13491 13763 . - 0 ID=cds-WP_002213210.1;Parent=gene-YPIP275_RS23740;Dbxref=GenBank:WP_002213210.1;Name=WP_002213210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213210.1;locus_tag=YPIP275_RS23740;product=BrnT family toxin;protein_id=WP_002213210.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 13899 14153 . + . ID=gene-YPIP275_RS23745;Name=YPIP275_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23745;old_locus_tag=YPIP275_1529 NZ_AAOS02000043.1 Protein Homology CDS 13899 14153 . + 0 ID=cds-WP_002213211.1;Parent=gene-YPIP275_RS23745;Dbxref=GenBank:WP_002213211.1;Name=WP_002213211.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213211.1;locus_tag=YPIP275_RS23745;product=phage baseplate assembly protein V;protein_id=WP_002213211.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 14150 14449 . + . ID=gene-YPIP275_RS23750;Name=YPIP275_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23750;old_locus_tag=YPIP275_1530 NZ_AAOS02000043.1 Protein Homology CDS 14150 14449 . + 0 ID=cds-WP_002213212.1;Parent=gene-YPIP275_RS23750;Dbxref=GenBank:WP_002213212.1;Name=WP_002213212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231180.1;locus_tag=YPIP275_RS23750;product=GPW/gp25 family protein;protein_id=WP_002213212.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 14466 14753 . + . ID=gene-YPIP275_RS23755;Name=YPIP275_RS23755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23755;old_locus_tag=YPIP275_1531 NZ_AAOS02000043.1 Protein Homology CDS 14466 14753 . + 0 ID=cds-WP_002215413.1;Parent=gene-YPIP275_RS23755;Dbxref=GenBank:WP_002215413.1;Name=WP_002215413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215413.1;locus_tag=YPIP275_RS23755;product=gp53-like domain-containing protein;protein_id=WP_002215413.1;transl_table=11 NZ_AAOS02000043.1 RefSeq pseudogene 15188 15705 . + . ID=gene-YPIP275_RS23765;Name=YPIP275_RS23765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23765;pseudo=true NZ_AAOS02000043.1 Protein Homology CDS 15188 15705 . + 0 ID=cds-YPIP275_RS23765;Parent=gene-YPIP275_RS23765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304161.1;locus_tag=YPIP275_RS23765;product=DUF2778 domain-containing protein;pseudo=true;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 15686 15964 . + . ID=gene-YPIP275_RS23770;Name=YPIP275_RS23770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23770 NZ_AAOS02000043.1 Protein Homology CDS 15686 15964 . + 0 ID=cds-WP_002215410.1;Parent=gene-YPIP275_RS23770;Dbxref=GenBank:WP_002215410.1;Name=WP_002215410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413700.1;locus_tag=YPIP275_RS23770;product=hypothetical protein;protein_id=WP_002215410.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 16129 16269 . + . ID=gene-YPIP275_RS23775;Name=YPIP275_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23775;old_locus_tag=YPIP275_1533 NZ_AAOS02000043.1 GeneMarkS-2+ CDS 16129 16269 . + 0 ID=cds-WP_002213214.1;Parent=gene-YPIP275_RS23775;Dbxref=GenBank:WP_002213214.1;Name=WP_002213214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS23775;product=hypothetical protein;protein_id=WP_002213214.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 16317 17830 . + . ID=gene-YPIP275_RS29020;Name=YPIP275_RS29020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29020 NZ_AAOS02000043.1 Protein Homology CDS 16317 16770 . + 0 ID=cds-WP_086016636.1;Parent=gene-YPIP275_RS29020;Dbxref=GenBank:WP_086016636.1;Name=WP_086016636.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611450.1;locus_tag=YPIP275_RS29020;product=IS3 family transposase;protein_id=WP_086016636.1;transl_table=11 NZ_AAOS02000043.1 Protein Homology CDS 16770 17830 . + 2 ID=cds-WP_086016636.1;Parent=gene-YPIP275_RS29020;Dbxref=GenBank:WP_086016636.1;Name=WP_086016636.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611450.1;locus_tag=YPIP275_RS29020;product=IS3 family transposase;protein_id=WP_086016636.1;transl_table=11 NZ_AAOS02000043.1 RefSeq pseudogene 18050 18505 . + . ID=gene-YPIP275_RS23790;Name=YPIP275_RS23790;end_range=18505,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23790;partial=true;pseudo=true NZ_AAOS02000043.1 Protein Homology CDS 18050 18505 . + 0 ID=cds-YPIP275_RS23790;Parent=gene-YPIP275_RS23790;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0033103;end_range=18505,.;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015848341.1;locus_tag=YPIP275_RS23790;partial=true;product=Hcp family type VI secretion system effector;pseudo=true;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 18420 18626 . + . ID=gene-YPIP275_RS23795;Name=YPIP275_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23795;old_locus_tag=YPIP275_1537 NZ_AAOS02000043.1 Protein Homology CDS 18420 18626 . + 0 ID=cds-WP_002213221.1;Parent=gene-YPIP275_RS23795;Dbxref=GenBank:WP_002213221.1;Name=WP_002213221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215405.1;locus_tag=YPIP275_RS23795;product=hypothetical protein;protein_id=WP_002213221.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 18656 18838 . - . ID=gene-YPIP275_RS23800;Name=YPIP275_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23800;old_locus_tag=YPIP275_1538 NZ_AAOS02000043.1 Protein Homology CDS 18656 18838 . - 0 ID=cds-WP_002213223.1;Parent=gene-YPIP275_RS23800;Dbxref=GenBank:WP_002213223.1;Name=WP_002213223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213223.1;locus_tag=YPIP275_RS23800;product=hypothetical protein;protein_id=WP_002213223.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 19030 19203 . - . ID=gene-YPIP275_RS29025;Name=YPIP275_RS29025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29025;old_locus_tag=YPIP275_1539 NZ_AAOS02000043.1 Protein Homology CDS 19030 19203 . - 0 ID=cds-WP_002213226.1;Parent=gene-YPIP275_RS29025;Dbxref=GenBank:WP_002213226.1;Name=WP_002213226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213226.1;locus_tag=YPIP275_RS29025;product=hypothetical protein;protein_id=WP_002213226.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 19963 20190 . - . ID=gene-YPIP275_RS23810;Name=YPIP275_RS23810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23810;old_locus_tag=YPIP275_1541 NZ_AAOS02000043.1 Protein Homology CDS 19963 20190 . - 0 ID=cds-WP_002215401.1;Parent=gene-YPIP275_RS23810;Dbxref=GenBank:WP_002215401.1;Name=WP_002215401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215401.1;locus_tag=YPIP275_RS23810;product=DnaB-like helicase C-terminal domain-containing protein;protein_id=WP_002215401.1;transl_table=11 NZ_AAOS02000043.1 RefSeq gene 20749 20922 . + . ID=gene-YPIP275_RS28140;Name=YPIP275_RS28140;end_range=20922,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28140;old_locus_tag=YPIP275_1543;partial=true NZ_AAOS02000043.1 Protein Homology CDS 20749 20922 . + 0 ID=cds-WP_071600185.1;Parent=gene-YPIP275_RS28140;Dbxref=GenBank:WP_071600185.1;Name=WP_071600185.1;end_range=20922,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413690.1;locus_tag=YPIP275_RS28140;partial=true;product=site-specific integrase;protein_id=WP_071600185.1;transl_table=11 ##sequence-region NZ_AAOS02000042.1 1 22235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000042.1 RefSeq region 1 22235 . + . ID=NZ_AAOS02000042.1:1..22235;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000042.1 RefSeq gene 1 746 . + . ID=gene-YPIP275_RS23515;Name=YPIP275_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23515;old_locus_tag=YPIP275_3424;partial=true;start_range=.,1 NZ_AAOS02000042.1 Protein Homology CDS 1 746 . + 2 ID=cds-WP_002213146.1;Parent=gene-YPIP275_RS23515;Dbxref=GenBank:WP_002213146.1;Name=WP_002213146.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS23515;partial=true;product=IS256 family transposase;protein_id=WP_002213146.1;start_range=.,1;transl_table=11 NZ_AAOS02000042.1 RefSeq pseudogene 781 1055 . + . ID=gene-YPIP275_RS23520;Name=YPIP275_RS23520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23520;partial=true;pseudo=true;start_range=.,781 NZ_AAOS02000042.1 Protein Homology CDS 781 1055 . + 0 ID=cds-YPIP275_RS23520;Parent=gene-YPIP275_RS23520;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001239408.1;locus_tag=YPIP275_RS23520;partial=true;product=OLD family endonuclease;pseudo=true;start_range=.,781;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 1215 2237 . + . ID=gene-YPIP275_RS23525;Name=YPIP275_RS23525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23525;old_locus_tag=YPIP275_3425 NZ_AAOS02000042.1 Protein Homology CDS 1215 2237 . + 0 ID=cds-WP_002211760.1;Parent=gene-YPIP275_RS23525;Dbxref=GenBank:WP_002211760.1;Name=WP_002211760.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612074.1;locus_tag=YPIP275_RS23525;product=IS110-like element IS1618 family transposase;protein_id=WP_002211760.1;transl_table=11 NZ_AAOS02000042.1 RefSeq pseudogene 2529 2795 . - . ID=gene-YPIP275_RS23530;Name=YPIP275_RS23530;end_range=2795,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23530;old_locus_tag=YPIP275_3426;partial=true;pseudo=true;start_range=.,2529 NZ_AAOS02000042.1 Protein Homology CDS 2529 2795 . - 0 ID=cds-YPIP275_RS23530;Parent=gene-YPIP275_RS23530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2795,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000728920.1;locus_tag=YPIP275_RS23530;partial=true;product=ISNCY family transposase;pseudo=true;start_range=.,2529;transl_table=11 NZ_AAOS02000042.1 RefSeq pseudogene 3613 4085 . + . ID=gene-YPIP275_RS23545;Name=YPIP275_RS23545;end_range=4085,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23545;old_locus_tag=YPIP275_3427;partial=true;pseudo=true NZ_AAOS02000042.1 Protein Homology CDS 3613 4085 . + 0 ID=cds-YPIP275_RS23545;Parent=gene-YPIP275_RS23545;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4085,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=YPIP275_RS23545;partial=true;product=reverse transcriptase domain-containing protein;pseudo=true;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 4313 6076 . - . ID=gene-YPIP275_RS23550;Name=YPIP275_RS23550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23550;old_locus_tag=YPIP275_3428 NZ_AAOS02000042.1 Protein Homology CDS 4313 6076 . - 0 ID=cds-WP_002211758.1;Parent=gene-YPIP275_RS23550;Dbxref=GenBank:WP_002211758.1;Name=WP_002211758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211758.1;locus_tag=YPIP275_RS23550;product=phospholipase D-like domain-containing protein;protein_id=WP_002211758.1;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 6154 6642 . - . ID=gene-YPIP275_RS23555;Name=YPIP275_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23555;old_locus_tag=YPIP275_3429 NZ_AAOS02000042.1 Protein Homology CDS 6154 6642 . - 0 ID=cds-WP_002211757.1;Parent=gene-YPIP275_RS23555;Dbxref=GenBank:WP_002211757.1;Name=WP_002211757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666958.1;locus_tag=YPIP275_RS23555;product=phospholipase D family nuclease;protein_id=WP_002211757.1;transl_table=11 NZ_AAOS02000042.1 RefSeq pseudogene 6713 6826 . - . ID=gene-YPIP275_RS29300;Name=YPIP275_RS29300;end_range=6826,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29300;partial=true;pseudo=true;start_range=.,6713 NZ_AAOS02000042.1 Protein Homology CDS 6713 6826 . - 0 ID=cds-YPIP275_RS29300;Parent=gene-YPIP275_RS29300;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=6826,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001776118.1;locus_tag=YPIP275_RS29300;partial=true;product=MobC family replication-relaxation protein;pseudo=true;start_range=.,6713;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 7382 7657 . + . ID=gene-YPIP275_RS23560;Name=YPIP275_RS23560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23560;old_locus_tag=YPIP275_3430 NZ_AAOS02000042.1 Protein Homology CDS 7382 7657 . + 0 ID=cds-WP_002211756.1;Parent=gene-YPIP275_RS23560;Dbxref=GenBank:WP_002211756.1;Name=WP_002211756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211756.1;locus_tag=YPIP275_RS23560;product=hypothetical protein;protein_id=WP_002211756.1;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 7680 8621 . - . ID=gene-YPIP275_RS23565;Name=YPIP275_RS23565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23565;old_locus_tag=YPIP275_3431 NZ_AAOS02000042.1 Protein Homology CDS 7680 8621 . - 0 ID=cds-WP_002215065.1;Parent=gene-YPIP275_RS23565;Dbxref=GenBank:WP_002215065.1;Name=WP_002215065.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004536,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA nuclease activity|0004536||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=YPIP275_RS23565;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_002215065.1;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 8687 9307 . - . ID=gene-YPIP275_RS23570;Name=YPIP275_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23570;old_locus_tag=YPIP275_3432 NZ_AAOS02000042.1 Protein Homology CDS 8687 9307 . - 0 ID=cds-WP_002211754.1;Parent=gene-YPIP275_RS23570;Dbxref=GenBank:WP_002211754.1;Name=WP_002211754.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211754.1;locus_tag=YPIP275_RS23570;product=recombinase family protein;protein_id=WP_002211754.1;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 9507 9833 . - . ID=gene-YPIP275_RS23575;Name=YPIP275_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23575 NZ_AAOS02000042.1 Protein Homology CDS 9507 9833 . - 0 ID=cds-WP_002215068.1;Parent=gene-YPIP275_RS23575;Dbxref=GenBank:WP_002215068.1;Name=WP_002215068.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215068.1;locus_tag=YPIP275_RS23575;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_002215068.1;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 9833 10060 . - . ID=gene-YPIP275_RS23580;Name=YPIP275_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23580;old_locus_tag=YPIP275_3433 NZ_AAOS02000042.1 Protein Homology CDS 9833 10060 . - 0 ID=cds-WP_002211753.1;Parent=gene-YPIP275_RS23580;Dbxref=GenBank:WP_002211753.1;Name=WP_002211753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211753.1;locus_tag=YPIP275_RS23580;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_002211753.1;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 10362 11567 . + . ID=gene-YPIP275_RS23585;Name=YPIP275_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23585;old_locus_tag=YPIP275_3434 NZ_AAOS02000042.1 Protein Homology CDS 10362 11567 . + 0 ID=cds-WP_002211752.1;Parent=gene-YPIP275_RS23585;Dbxref=GenBank:WP_002211752.1;Name=WP_002211752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817637.1;locus_tag=YPIP275_RS23585;product=AAA family ATPase;protein_id=WP_002211752.1;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 11564 12535 . + . ID=gene-YPIP275_RS23590;Name=YPIP275_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23590;old_locus_tag=YPIP275_3435 NZ_AAOS02000042.1 Protein Homology CDS 11564 12535 . + 0 ID=cds-WP_002215070.1;Parent=gene-YPIP275_RS23590;Dbxref=GenBank:WP_002215070.1;Name=WP_002215070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215070.1;locus_tag=YPIP275_RS23590;product=ParB family protein;protein_id=WP_002215070.1;transl_table=11 NZ_AAOS02000042.1 RefSeq pseudogene 12672 12792 . - . ID=gene-YPIP275_RS28110;Name=YPIP275_RS28110;end_range=12792,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28110;old_locus_tag=YPIP275_3436;partial=true;pseudo=true NZ_AAOS02000042.1 Protein Homology CDS 12672 12792 . - 0 ID=cds-YPIP275_RS28110;Parent=gene-YPIP275_RS28110;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=12792,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229773.1;locus_tag=YPIP275_RS28110;partial=true;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 12920 14311 . + . ID=gene-YPIP275_RS23595;Name=YPIP275_RS23595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23595;old_locus_tag=YPIP275_3437 NZ_AAOS02000042.1 Protein Homology CDS 12920 14311 . + 0 ID=cds-WP_002211751.1;Parent=gene-YPIP275_RS23595;Dbxref=GenBank:WP_002211751.1;Name=WP_002211751.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211751.1;locus_tag=YPIP275_RS23595;product=ATP-binding protein;protein_id=WP_002211751.1;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 14473 14673 . - . ID=gene-YPIP275_RS23600;Name=YPIP275_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23600;old_locus_tag=YPIP275_3438 NZ_AAOS02000042.1 Protein Homology CDS 14473 14673 . - 0 ID=cds-WP_002211750.1;Parent=gene-YPIP275_RS23600;Dbxref=GenBank:WP_002211750.1;Name=WP_002211750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694174.1;locus_tag=YPIP275_RS23600;product=hypothetical protein;protein_id=WP_002211750.1;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 15174 15851 . + . ID=gene-YPIP275_RS23605;Name=YPIP275_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23605;old_locus_tag=YPIP275_3439 NZ_AAOS02000042.1 Protein Homology CDS 15174 15851 . + 0 ID=cds-WP_002211749.1;Parent=gene-YPIP275_RS23605;Dbxref=GenBank:WP_002211749.1;Name=WP_002211749.1;Ontology_term=GO:0032259,GO:0003677,GO:0008168,GO:0008170,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,N-methyltransferase activity|0008170||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052645.1;locus_tag=YPIP275_RS23605;product=DNA methylase;protein_id=WP_002211749.1;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 15851 16072 . + . ID=gene-YPIP275_RS23610;Name=YPIP275_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23610;old_locus_tag=YPIP275_3440 NZ_AAOS02000042.1 Protein Homology CDS 15851 16072 . + 0 ID=cds-WP_002211748.1;Parent=gene-YPIP275_RS23610;Dbxref=GenBank:WP_002211748.1;Name=WP_002211748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958723.1;locus_tag=YPIP275_RS23610;product=YubE family protein;protein_id=WP_002211748.1;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 16083 16502 . + . ID=gene-YPIP275_RS23615;Name=YPIP275_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23615;old_locus_tag=YPIP275_3441 NZ_AAOS02000042.1 Protein Homology CDS 16083 16502 . + 0 ID=cds-WP_002215082.1;Parent=gene-YPIP275_RS23615;Dbxref=GenBank:WP_002215082.1;Name=WP_002215082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000274511.1;locus_tag=YPIP275_RS23615;product=DUF1380 family protein;protein_id=WP_002215082.1;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 16556 17335 . + . ID=gene-YPIP275_RS23620;Name=YPIP275_RS23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23620;old_locus_tag=YPIP275_3442 NZ_AAOS02000042.1 Protein Homology CDS 16556 17335 . + 0 ID=cds-WP_002211747.1;Parent=gene-YPIP275_RS23620;Dbxref=GenBank:WP_002211747.1;Name=WP_002211747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694197.1;locus_tag=YPIP275_RS23620;product=YubG family protein;protein_id=WP_002211747.1;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 17734 18240 . + . ID=gene-YPIP275_RS23625;Name=YPIP275_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23625;old_locus_tag=YPIP275_3443 NZ_AAOS02000042.1 Protein Homology CDS 17734 18240 . + 0 ID=cds-WP_002211746.1;Parent=gene-YPIP275_RS23625;Dbxref=GenBank:WP_002211746.1;Name=WP_002211746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000108571.1;locus_tag=YPIP275_RS23625;product=antirestriction protein ArdA;protein_id=WP_002211746.1;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 18953 19183 . + . ID=gene-YPIP275_RS23630;Name=YPIP275_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23630;old_locus_tag=YPIP275_3444 NZ_AAOS02000042.1 Protein Homology CDS 18953 19183 . + 0 ID=cds-WP_002211745.1;Parent=gene-YPIP275_RS23630;Dbxref=GenBank:WP_002211745.1;Name=WP_002211745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694200.1;locus_tag=YPIP275_RS23630;product=DUF905 domain-containing protein;protein_id=WP_002211745.1;transl_table=11 NZ_AAOS02000042.1 RefSeq gene 19256 21265 . + . ID=gene-YPIP275_RS23635;Name=YPIP275_RS23635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23635;old_locus_tag=YPIP275_3445 NZ_AAOS02000042.1 Protein Homology CDS 19256 21265 . + 0 ID=cds-WP_002211744.1;Parent=gene-YPIP275_RS23635;Dbxref=GenBank:WP_002211744.1;Name=WP_002211744.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211744.1;locus_tag=YPIP275_RS23635;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_002211744.1;transl_table=11 NZ_AAOS02000042.1 RefSeq pseudogene 21389 22235 . + . ID=gene-YPIP275_RS23640;Name=istA;end_range=22235,.;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=YPIP275_RS23640;old_locus_tag=YPIP275_3446;partial=true;pseudo=true NZ_AAOS02000042.1 Protein Homology CDS 21389 22235 . + 0 ID=cds-YPIP275_RS23640;Parent=gene-YPIP275_RS23640;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=22235,.;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS23640;partial=true;product=IS21-like element IS100 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_AAOS02000041.1 1 24668 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000041.1 RefSeq region 1 24668 . + . ID=NZ_AAOS02000041.1:1..24668;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000041.1 RefSeq gene 1 1797 . - . ID=gene-YPIP275_RS23400;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=YPIP275_RS23400;old_locus_tag=YPIP275_3996;partial=true;start_range=.,1 NZ_AAOS02000041.1 Protein Homology CDS 1 1797 . - 0 ID=cds-WP_043940367.1;Parent=gene-YPIP275_RS23400;Dbxref=GenBank:WP_043940367.1;Name=WP_043940367.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217380.1;locus_tag=YPIP275_RS23400;partial=true;product=ribosome-dependent GTPase TypA;protein_id=WP_043940367.1;start_range=.,1;transl_table=11 NZ_AAOS02000041.1 RefSeq gene 2359 3768 . + . ID=gene-YPIP275_RS23410;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=YPIP275_RS23410;old_locus_tag=YPIP275_3998 NZ_AAOS02000041.1 Protein Homology CDS 2359 3768 . + 0 ID=cds-WP_002213150.1;Parent=gene-YPIP275_RS23410;Dbxref=GenBank:WP_002213150.1;Name=WP_002213150.1;Ontology_term=GO:0008152,GO:1901704,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=metabolic process|0008152||IEA,L-glutamine biosynthetic process|1901704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312819.1;locus_tag=YPIP275_RS23410;product=glutamate--ammonia ligase;protein_id=WP_002213150.1;transl_table=11 NZ_AAOS02000041.1 RefSeq gene 4021 5070 . + . ID=gene-YPIP275_RS23415;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=YPIP275_RS23415;old_locus_tag=YPIP275_3999 NZ_AAOS02000041.1 Protein Homology CDS 4021 5070 . + 0 ID=cds-WP_002213151.1;Parent=gene-YPIP275_RS23415;Dbxref=GenBank:WP_002213151.1;Name=WP_002213151.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224326.1;locus_tag=YPIP275_RS23415;product=nitrogen regulation protein NR(II);protein_id=WP_002213151.1;transl_table=11 NZ_AAOS02000041.1 RefSeq gene 5078 6490 . + . ID=gene-YPIP275_RS23420;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=YPIP275_RS23420;old_locus_tag=YPIP275_4000 NZ_AAOS02000041.1 Protein Homology CDS 5078 6490 . + 0 ID=cds-WP_002213152.1;Parent=gene-YPIP275_RS23420;Dbxref=GenBank:WP_002213152.1;Name=WP_002213152.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=YPIP275_RS23420;product=nitrogen regulation protein NR(I);protein_id=WP_002213152.1;transl_table=11 NZ_AAOS02000041.1 RefSeq gene 6544 7917 . - . ID=gene-YPIP275_RS23425;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=YPIP275_RS23425;old_locus_tag=YPIP275_4001 NZ_AAOS02000041.1 Protein Homology CDS 6544 7917 . - 0 ID=cds-WP_002213155.1;Parent=gene-YPIP275_RS23425;Dbxref=GenBank:WP_002213155.1;Name=WP_002213155.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312816.2;locus_tag=YPIP275_RS23425;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_002213155.1;transl_table=11 NZ_AAOS02000041.1 RefSeq gene 8100 8666 . - . ID=gene-YPIP275_RS23430;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=YPIP275_RS23430;old_locus_tag=YPIP275_4002 NZ_AAOS02000041.1 Protein Homology CDS 8100 8666 . - 0 ID=cds-WP_002213158.1;Parent=gene-YPIP275_RS23430;Dbxref=GenBank:WP_002213158.1;Name=WP_002213158.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191191.1;locus_tag=YPIP275_RS23430;product=Der GTPase-activating protein YihI;protein_id=WP_002213158.1;transl_table=11 NZ_AAOS02000041.1 RefSeq gene 9411 10061 . + . ID=gene-YPIP275_RS23435;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=YPIP275_RS23435;old_locus_tag=YPIP275_4003 NZ_AAOS02000041.1 Protein Homology CDS 9411 10061 . + 0 ID=cds-WP_002213160.1;Parent=gene-YPIP275_RS23435;Dbxref=GenBank:WP_002213160.1;Name=WP_002213160.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213160.1;locus_tag=YPIP275_RS23435;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_002213160.1;transl_table=11 NZ_AAOS02000041.1 RefSeq gene 10313 10771 . - . ID=gene-YPIP275_RS23440;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS23440;old_locus_tag=YPIP275_4005 NZ_AAOS02000041.1 Protein Homology CDS 10313 10771 . - 0 ID=cds-WP_002213775.1-6;Parent=gene-YPIP275_RS23440;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS23440;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000041.1 RefSeq pseudogene 10959 11003 . - . ID=gene-YPIP275_RS29380;Name=spfP;gbkey=Gene;gene=spfP;gene_biotype=pseudogene;locus_tag=YPIP275_RS29380;partial=true;pseudo=true;start_range=.,10959 NZ_AAOS02000041.1 Protein Homology CDS 10959 11003 . - 0 ID=cds-YPIP275_RS29380;Parent=gene-YPIP275_RS29380;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=spfP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_013606034.1;locus_tag=YPIP275_RS29380;partial=true;product=small protein SpfP;pseudo=true;start_range=.,10959;transl_table=11 NZ_AAOS02000041.1 RefSeq gene 11180 13978 . - . ID=gene-YPIP275_RS23450;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=YPIP275_RS23450;old_locus_tag=YPIP275_4006 NZ_AAOS02000041.1 Protein Homology CDS 11180 13978 . - 0 ID=cds-WP_002213164.1;Parent=gene-YPIP275_RS23450;Dbxref=GenBank:WP_002213164.1;Name=WP_002213164.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191199.1;locus_tag=YPIP275_RS23450;product=DNA polymerase I;protein_id=WP_002213164.1;transl_table=11 NZ_AAOS02000041.1 RefSeq gene 14470 15093 . - . ID=gene-YPIP275_RS23455;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=YPIP275_RS23455;old_locus_tag=YPIP275_4008 NZ_AAOS02000041.1 Protein Homology CDS 14470 15093 . - 0 ID=cds-WP_002213168.1;Parent=gene-YPIP275_RS23455;Dbxref=GenBank:WP_002213168.1;Name=WP_002213168.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080347.1;locus_tag=YPIP275_RS23455;product=thiol:disulfide interchange protein DsbA;protein_id=WP_002213168.1;transl_table=11 NZ_AAOS02000041.1 RefSeq gene 15121 16107 . - . ID=gene-YPIP275_RS23460;Name=YPIP275_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23460;old_locus_tag=YPIP275_4009 NZ_AAOS02000041.1 Protein Homology CDS 15121 16107 . - 0 ID=cds-WP_002213169.1;Parent=gene-YPIP275_RS23460;Dbxref=GenBank:WP_002213169.1;Name=WP_002213169.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016582340.1;locus_tag=YPIP275_RS23460;product=serine/threonine protein kinase;protein_id=WP_002213169.1;transl_table=11 NZ_AAOS02000041.1 RefSeq gene 16187 16456 . - . ID=gene-YPIP275_RS23465;Name=YPIP275_RS23465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23465;old_locus_tag=YPIP275_4010 NZ_AAOS02000041.1 Protein Homology CDS 16187 16456 . - 0 ID=cds-WP_002213170.1;Parent=gene-YPIP275_RS23465;Dbxref=GenBank:WP_002213170.1;Name=WP_002213170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191202.1;locus_tag=YPIP275_RS23465;product=YihD family protein;protein_id=WP_002213170.1;transl_table=11 NZ_AAOS02000041.1 RefSeq gene 16610 17197 . + . ID=gene-YPIP275_RS23470;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=YPIP275_RS23470;old_locus_tag=YPIP275_4011 NZ_AAOS02000041.1 Protein Homology CDS 16610 17197 . + 0 ID=cds-WP_002213171.1;Parent=gene-YPIP275_RS23470;Dbxref=GenBank:WP_002213171.1;Name=WP_002213171.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011991007.1;locus_tag=YPIP275_RS23470;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_002213171.1;transl_table=11 NZ_AAOS02000041.1 RefSeq gene 17197 17727 . + . ID=gene-YPIP275_RS23475;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=YPIP275_RS23475;old_locus_tag=YPIP275_4012 NZ_AAOS02000041.1 Protein Homology CDS 17197 17727 . + 0 ID=cds-WP_002217538.1;Parent=gene-YPIP275_RS23475;Dbxref=GenBank:WP_002217538.1;Name=WP_002217538.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217538.1;locus_tag=YPIP275_RS23475;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_002217538.1;transl_table=11 NZ_AAOS02000041.1 RefSeq pseudogene 17785 18447 . - . ID=gene-YPIP275_RS23480;Name=YPIP275_RS23480;end_range=18447,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23480;old_locus_tag=YPIP275_4013;partial=true;pseudo=true NZ_AAOS02000041.1 Protein Homology CDS 17785 18447 . - 0 ID=cds-YPIP275_RS23480;Parent=gene-YPIP275_RS23480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=18447,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS23480;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_AAOS02000041.1 RefSeq gene 18528 19550 . + . ID=gene-YPIP275_RS23485;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS23485;old_locus_tag=YPIP275_4014 NZ_AAOS02000041.1 Protein Homology CDS 18528 19550 . + 0 ID=cds-WP_000255944.1-2;Parent=gene-YPIP275_RS23485;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS23485;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000041.1 RefSeq gene 19547 20329 . + . ID=gene-YPIP275_RS23490;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS23490;old_locus_tag=YPIP275_4015 NZ_AAOS02000041.1 Protein Homology CDS 19547 20329 . + 0 ID=cds-WP_001317493.1-5;Parent=gene-YPIP275_RS23490;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS23490;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000041.1 RefSeq pseudogene 20392 20952 . - . ID=gene-YPIP275_RS23495;Name=YPIP275_RS23495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23495;old_locus_tag=YPIP275_4016;partial=true;pseudo=true;start_range=.,20392 NZ_AAOS02000041.1 Protein Homology CDS 20392 20952 . - 0 ID=cds-YPIP275_RS23495;Parent=gene-YPIP275_RS23495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS23495;partial=true;product=IS256-like element IS285 family transposase;pseudo=true;start_range=.,20392;transl_table=11 NZ_AAOS02000041.1 RefSeq gene 21455 21570 . - . ID=gene-YPIP275_RS23500;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=YPIP275_RS23500;old_locus_tag=YPIP275_4017 NZ_AAOS02000041.1 cmsearch rRNA 21455 21570 . - . ID=rna-YPIP275_RS23500;Parent=gene-YPIP275_RS23500;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS23500;product=5S ribosomal RNA NZ_AAOS02000041.1 cmsearch exon 21455 21570 . - . ID=exon-YPIP275_RS23500-1;Parent=rna-YPIP275_RS23500;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS23500;product=5S ribosomal RNA NZ_AAOS02000041.1 RefSeq gene 21680 24586 . - . ID=gene-YPIP275_RS23505;Name=YPIP275_RS23505;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPIP275_RS23505;old_locus_tag=YPIP275_4018 NZ_AAOS02000041.1 cmsearch rRNA 21680 24586 . - . ID=rna-YPIP275_RS23505;Parent=gene-YPIP275_RS23505;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS23505;product=23S ribosomal RNA NZ_AAOS02000041.1 cmsearch exon 21680 24586 . - . ID=exon-YPIP275_RS23505-1;Parent=rna-YPIP275_RS23505;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS23505;product=23S ribosomal RNA ##sequence-region NZ_AAOS02000040.1 1 27440 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000040.1 RefSeq region 1 27440 . + . ID=NZ_AAOS02000040.1:1..27440;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000040.1 RefSeq pseudogene 1 478 . - . ID=gene-YPIP275_RS23240;Name=YPIP275_RS23240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23240;old_locus_tag=YPIP275_1772;partial=true;pseudo=true;start_range=.,1 NZ_AAOS02000040.1 Protein Homology CDS 1 478 . - 0 ID=cds-YPIP275_RS23240;Parent=gene-YPIP275_RS23240;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0003677,GO:0004527;gbkey=CDS;go_function=DNA binding|0003677||IEA,exonuclease activity|0004527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220814.1;locus_tag=YPIP275_RS23240;partial=true;product=PIN domain nuclease;pseudo=true;start_range=.,1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 539 1567 . - . ID=gene-YPIP275_RS23245;Name=YPIP275_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23245;old_locus_tag=YPIP275_1773 NZ_AAOS02000040.1 Protein Homology CDS 539 1567 . - 0 ID=cds-WP_002213132.1;Parent=gene-YPIP275_RS23245;Dbxref=GenBank:WP_002213132.1;Name=WP_002213132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220815.1;locus_tag=YPIP275_RS23245;product=hypothetical protein;protein_id=WP_002213132.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 1687 2118 . - . ID=gene-YPIP275_RS23250;Name=YPIP275_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23250;old_locus_tag=YPIP275_1774 NZ_AAOS02000040.1 Protein Homology CDS 1687 2118 . - 0 ID=cds-WP_002213135.1;Parent=gene-YPIP275_RS23250;Dbxref=GenBank:WP_002213135.1;Name=WP_002213135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220816.1;locus_tag=YPIP275_RS23250;product=hypothetical protein;protein_id=WP_002213135.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 2339 2590 . + . ID=gene-YPIP275_RS23255;Name=YPIP275_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23255 NZ_AAOS02000040.1 Protein Homology CDS 2339 2590 . + 0 ID=cds-WP_002215095.1;Parent=gene-YPIP275_RS23255;Dbxref=GenBank:WP_002215095.1;Name=WP_002215095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110102.1;locus_tag=YPIP275_RS23255;product=hypothetical protein;protein_id=WP_002215095.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 2663 3226 . + . ID=gene-YPIP275_RS23260;Name=YPIP275_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23260;old_locus_tag=YPIP275_1776 NZ_AAOS02000040.1 Protein Homology CDS 2663 3226 . + 0 ID=cds-WP_002213141.1;Parent=gene-YPIP275_RS23260;Dbxref=GenBank:WP_002213141.1;Name=WP_002213141.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012228774.1;locus_tag=YPIP275_RS23260;product=helix-turn-helix transcriptional regulator;protein_id=WP_002213141.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 3256 3699 . - . ID=gene-YPIP275_RS23265;Name=YPIP275_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23265;old_locus_tag=YPIP275_1777 NZ_AAOS02000040.1 Protein Homology CDS 3256 3699 . - 0 ID=cds-WP_002213143.1;Parent=gene-YPIP275_RS23265;Dbxref=GenBank:WP_002213143.1;Name=WP_002213143.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF051138.2;locus_tag=YPIP275_RS23265;product=DUF7740 domain-containing protein;protein_id=WP_002213143.1;transl_table=11 NZ_AAOS02000040.1 RefSeq pseudogene 3696 4184 . - . ID=gene-YPIP275_RS23270;Name=YPIP275_RS23270;end_range=4184,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23270;old_locus_tag=YPIP275_1778;partial=true;pseudo=true NZ_AAOS02000040.1 Protein Homology CDS 3696 4184 . - 0 ID=cds-YPIP275_RS23270;Parent=gene-YPIP275_RS23270;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4184,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000645856.1;locus_tag=YPIP275_RS23270;partial=true;product=uracil-DNA glycosylase family protein;pseudo=true;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 4251 5033 . - . ID=gene-YPIP275_RS23275;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS23275;old_locus_tag=YPIP275_1779 NZ_AAOS02000040.1 Protein Homology CDS 4251 5033 . - 0 ID=cds-WP_001317493.1-6;Parent=gene-YPIP275_RS23275;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS23275;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 5030 6052 . - . ID=gene-YPIP275_RS23280;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS23280;old_locus_tag=YPIP275_1780 NZ_AAOS02000040.1 Protein Homology CDS 5030 6052 . - 0 ID=cds-WP_000255944.1-3;Parent=gene-YPIP275_RS23280;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS23280;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 6176 8185 . - . ID=gene-YPIP275_RS23285;Name=YPIP275_RS23285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23285;old_locus_tag=YPIP275_1781 NZ_AAOS02000040.1 Protein Homology CDS 6176 8185 . - 0 ID=cds-WP_002211744.1-2;Parent=gene-YPIP275_RS23285;Dbxref=GenBank:WP_002211744.1;Name=WP_002211744.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211744.1;locus_tag=YPIP275_RS23285;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_002211744.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 8258 8488 . - . ID=gene-YPIP275_RS23290;Name=YPIP275_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23290;old_locus_tag=YPIP275_1782 NZ_AAOS02000040.1 Protein Homology CDS 8258 8488 . - 0 ID=cds-WP_002211745.1-2;Parent=gene-YPIP275_RS23290;Dbxref=GenBank:WP_002211745.1;Name=WP_002211745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694200.1;locus_tag=YPIP275_RS23290;product=DUF905 domain-containing protein;protein_id=WP_002211745.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 9201 9707 . - . ID=gene-YPIP275_RS23295;Name=YPIP275_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23295;old_locus_tag=YPIP275_1783 NZ_AAOS02000040.1 Protein Homology CDS 9201 9707 . - 0 ID=cds-WP_002211746.1-2;Parent=gene-YPIP275_RS23295;Dbxref=GenBank:WP_002211746.1;Name=WP_002211746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000108571.1;locus_tag=YPIP275_RS23295;product=antirestriction protein ArdA;protein_id=WP_002211746.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 10106 10885 . - . ID=gene-YPIP275_RS23300;Name=YPIP275_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23300;old_locus_tag=YPIP275_1784 NZ_AAOS02000040.1 Protein Homology CDS 10106 10885 . - 0 ID=cds-WP_002211747.1-2;Parent=gene-YPIP275_RS23300;Dbxref=GenBank:WP_002211747.1;Name=WP_002211747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694197.1;locus_tag=YPIP275_RS23300;product=YubG family protein;protein_id=WP_002211747.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 10939 11358 . - . ID=gene-YPIP275_RS23305;Name=YPIP275_RS23305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23305;old_locus_tag=YPIP275_1785 NZ_AAOS02000040.1 Protein Homology CDS 10939 11358 . - 0 ID=cds-WP_002215082.1-2;Parent=gene-YPIP275_RS23305;Dbxref=GenBank:WP_002215082.1;Name=WP_002215082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000274511.1;locus_tag=YPIP275_RS23305;product=DUF1380 family protein;protein_id=WP_002215082.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 11369 11590 . - . ID=gene-YPIP275_RS23310;Name=YPIP275_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23310;old_locus_tag=YPIP275_1786 NZ_AAOS02000040.1 Protein Homology CDS 11369 11590 . - 0 ID=cds-WP_002211748.1-2;Parent=gene-YPIP275_RS23310;Dbxref=GenBank:WP_002211748.1;Name=WP_002211748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958723.1;locus_tag=YPIP275_RS23310;product=YubE family protein;protein_id=WP_002211748.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 11590 12267 . - . ID=gene-YPIP275_RS23315;Name=YPIP275_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23315;old_locus_tag=YPIP275_1787 NZ_AAOS02000040.1 Protein Homology CDS 11590 12267 . - 0 ID=cds-WP_002211749.1-2;Parent=gene-YPIP275_RS23315;Dbxref=GenBank:WP_002211749.1;Name=WP_002211749.1;Ontology_term=GO:0032259,GO:0003677,GO:0008168,GO:0008170,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,N-methyltransferase activity|0008170||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052645.1;locus_tag=YPIP275_RS23315;product=DNA methylase;protein_id=WP_002211749.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 12768 12968 . + . ID=gene-YPIP275_RS23320;Name=YPIP275_RS23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23320;old_locus_tag=YPIP275_1788 NZ_AAOS02000040.1 Protein Homology CDS 12768 12968 . + 0 ID=cds-WP_002211750.1-2;Parent=gene-YPIP275_RS23320;Dbxref=GenBank:WP_002211750.1;Name=WP_002211750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694174.1;locus_tag=YPIP275_RS23320;product=hypothetical protein;protein_id=WP_002211750.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 13130 14521 . - . ID=gene-YPIP275_RS23325;Name=YPIP275_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23325;old_locus_tag=YPIP275_1789 NZ_AAOS02000040.1 Protein Homology CDS 13130 14521 . - 0 ID=cds-WP_002211751.1-2;Parent=gene-YPIP275_RS23325;Dbxref=GenBank:WP_002211751.1;Name=WP_002211751.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211751.1;locus_tag=YPIP275_RS23325;product=ATP-binding protein;protein_id=WP_002211751.1;transl_table=11 NZ_AAOS02000040.1 RefSeq pseudogene 14649 14769 . + . ID=gene-YPIP275_RS28055;Name=YPIP275_RS28055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28055;old_locus_tag=YPIP275_1790;partial=true;pseudo=true;start_range=.,14649 NZ_AAOS02000040.1 Protein Homology CDS 14649 14769 . + 0 ID=cds-YPIP275_RS28055;Parent=gene-YPIP275_RS28055;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229773.1;locus_tag=YPIP275_RS28055;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,14649;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 14906 15877 . - . ID=gene-YPIP275_RS23330;Name=YPIP275_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23330;old_locus_tag=YPIP275_1791 NZ_AAOS02000040.1 Protein Homology CDS 14906 15877 . - 0 ID=cds-WP_002215070.1-2;Parent=gene-YPIP275_RS23330;Dbxref=GenBank:WP_002215070.1;Name=WP_002215070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215070.1;locus_tag=YPIP275_RS23330;product=ParB family protein;protein_id=WP_002215070.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 15874 17079 . - . ID=gene-YPIP275_RS23335;Name=YPIP275_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23335;old_locus_tag=YPIP275_1792 NZ_AAOS02000040.1 Protein Homology CDS 15874 17079 . - 0 ID=cds-WP_002211752.1-2;Parent=gene-YPIP275_RS23335;Dbxref=GenBank:WP_002211752.1;Name=WP_002211752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817637.1;locus_tag=YPIP275_RS23335;product=AAA family ATPase;protein_id=WP_002211752.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 17381 17608 . + . ID=gene-YPIP275_RS23340;Name=YPIP275_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23340;old_locus_tag=YPIP275_1793 NZ_AAOS02000040.1 Protein Homology CDS 17381 17608 . + 0 ID=cds-WP_002211753.1-2;Parent=gene-YPIP275_RS23340;Dbxref=GenBank:WP_002211753.1;Name=WP_002211753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211753.1;locus_tag=YPIP275_RS23340;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_002211753.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 17608 17934 . + . ID=gene-YPIP275_RS23345;Name=YPIP275_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23345 NZ_AAOS02000040.1 Protein Homology CDS 17608 17934 . + 0 ID=cds-WP_002215068.1-2;Parent=gene-YPIP275_RS23345;Dbxref=GenBank:WP_002215068.1;Name=WP_002215068.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215068.1;locus_tag=YPIP275_RS23345;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_002215068.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 18134 18754 . + . ID=gene-YPIP275_RS23350;Name=YPIP275_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23350;old_locus_tag=YPIP275_1794 NZ_AAOS02000040.1 Protein Homology CDS 18134 18754 . + 0 ID=cds-WP_002211754.1-2;Parent=gene-YPIP275_RS23350;Dbxref=GenBank:WP_002211754.1;Name=WP_002211754.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211754.1;locus_tag=YPIP275_RS23350;product=recombinase family protein;protein_id=WP_002211754.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 18820 19761 . + . ID=gene-YPIP275_RS23355;Name=YPIP275_RS23355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23355;old_locus_tag=YPIP275_1795 NZ_AAOS02000040.1 Protein Homology CDS 18820 19761 . + 0 ID=cds-WP_002215065.1-2;Parent=gene-YPIP275_RS23355;Dbxref=GenBank:WP_002215065.1;Name=WP_002215065.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004536,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA nuclease activity|0004536||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=YPIP275_RS23355;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_002215065.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 19784 20059 . - . ID=gene-YPIP275_RS23360;Name=YPIP275_RS23360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23360;old_locus_tag=YPIP275_1796 NZ_AAOS02000040.1 Protein Homology CDS 19784 20059 . - 0 ID=cds-WP_002211756.1-2;Parent=gene-YPIP275_RS23360;Dbxref=GenBank:WP_002211756.1;Name=WP_002211756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211756.1;locus_tag=YPIP275_RS23360;product=hypothetical protein;protein_id=WP_002211756.1;transl_table=11 NZ_AAOS02000040.1 RefSeq pseudogene 20615 20728 . + . ID=gene-YPIP275_RS29295;Name=YPIP275_RS29295;end_range=20728,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29295;partial=true;pseudo=true;start_range=.,20615 NZ_AAOS02000040.1 Protein Homology CDS 20615 20728 . + 0 ID=cds-YPIP275_RS29295;Parent=gene-YPIP275_RS29295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=20728,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001776118.1;locus_tag=YPIP275_RS29295;partial=true;product=MobC family replication-relaxation protein;pseudo=true;start_range=.,20615;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 20799 21287 . + . ID=gene-YPIP275_RS23365;Name=YPIP275_RS23365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23365;old_locus_tag=YPIP275_1797 NZ_AAOS02000040.1 Protein Homology CDS 20799 21287 . + 0 ID=cds-WP_002211757.1-2;Parent=gene-YPIP275_RS23365;Dbxref=GenBank:WP_002211757.1;Name=WP_002211757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666958.1;locus_tag=YPIP275_RS23365;product=phospholipase D family nuclease;protein_id=WP_002211757.1;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 21365 23128 . + . ID=gene-YPIP275_RS23370;Name=YPIP275_RS23370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23370;old_locus_tag=YPIP275_1798 NZ_AAOS02000040.1 Protein Homology CDS 21365 23128 . + 0 ID=cds-WP_002211758.1-2;Parent=gene-YPIP275_RS23370;Dbxref=GenBank:WP_002211758.1;Name=WP_002211758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211758.1;locus_tag=YPIP275_RS23370;product=phospholipase D-like domain-containing protein;protein_id=WP_002211758.1;transl_table=11 NZ_AAOS02000040.1 RefSeq pseudogene 23356 23828 . - . ID=gene-YPIP275_RS23375;Name=YPIP275_RS23375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23375;old_locus_tag=YPIP275_1799;partial=true;pseudo=true;start_range=.,23356 NZ_AAOS02000040.1 Protein Homology CDS 23356 23828 . - 0 ID=cds-YPIP275_RS23375;Parent=gene-YPIP275_RS23375;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=YPIP275_RS23375;partial=true;product=reverse transcriptase domain-containing protein;pseudo=true;start_range=.,23356;transl_table=11 NZ_AAOS02000040.1 RefSeq pseudogene 24646 24912 . + . ID=gene-YPIP275_RS23380;Name=YPIP275_RS23380;end_range=24912,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23380;old_locus_tag=YPIP275_1800;partial=true;pseudo=true;start_range=.,24646 NZ_AAOS02000040.1 Protein Homology CDS 24646 24912 . + 0 ID=cds-YPIP275_RS23380;Parent=gene-YPIP275_RS23380;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=24912,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000728920.1;locus_tag=YPIP275_RS23380;partial=true;product=ISNCY family transposase;pseudo=true;start_range=.,24646;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 25204 26226 . - . ID=gene-YPIP275_RS23385;Name=YPIP275_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23385;old_locus_tag=YPIP275_1801 NZ_AAOS02000040.1 Protein Homology CDS 25204 26226 . - 0 ID=cds-WP_002211760.1-2;Parent=gene-YPIP275_RS23385;Dbxref=GenBank:WP_002211760.1;Name=WP_002211760.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612074.1;locus_tag=YPIP275_RS23385;product=IS110-like element IS1618 family transposase;protein_id=WP_002211760.1;transl_table=11 NZ_AAOS02000040.1 RefSeq pseudogene 26386 26660 . - . ID=gene-YPIP275_RS23390;Name=YPIP275_RS23390;end_range=26660,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS23390;partial=true;pseudo=true NZ_AAOS02000040.1 Protein Homology CDS 26386 26660 . - 0 ID=cds-YPIP275_RS23390;Parent=gene-YPIP275_RS23390;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=26660,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001239408.1;locus_tag=YPIP275_RS23390;partial=true;product=OLD family endonuclease;pseudo=true;transl_table=11 NZ_AAOS02000040.1 RefSeq gene 26695 27440 . - . ID=gene-YPIP275_RS23395;Name=YPIP275_RS23395;end_range=27440,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23395;old_locus_tag=YPIP275_1802;partial=true NZ_AAOS02000040.1 Protein Homology CDS 26695 27440 . - 2 ID=cds-WP_002213146.1-2;Parent=gene-YPIP275_RS23395;Dbxref=GenBank:WP_002213146.1;Name=WP_002213146.1;Ontology_term=GO:0004803;end_range=27440,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS23395;partial=true;product=IS256 family transposase;protein_id=WP_002213146.1;transl_table=11 ##sequence-region NZ_AAOS02000039.1 1 33313 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000039.1 RefSeq region 1 33313 . + . ID=NZ_AAOS02000039.1:1..33313;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000039.1 RefSeq gene 1 117 . + . ID=gene-YPIP275_RS23055;Name=YPIP275_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23055;old_locus_tag=YPIP275_1803;partial=true;start_range=.,1 NZ_AAOS02000039.1 Protein Homology CDS 1 117 . + 0 ID=cds-WP_002213078.1;Parent=gene-YPIP275_RS23055;Dbxref=GenBank:WP_002213078.1;Name=WP_002213078.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016940845.1;locus_tag=YPIP275_RS23055;partial=true;product=acyl carrier protein;protein_id=WP_002213078.1;start_range=.,1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 212 1453 . + . ID=gene-YPIP275_RS23060;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=YPIP275_RS23060;old_locus_tag=YPIP275_1804 NZ_AAOS02000039.1 Protein Homology CDS 212 1453 . + 0 ID=cds-WP_002213079.1;Parent=gene-YPIP275_RS23060;Dbxref=GenBank:WP_002213079.1;Name=WP_002213079.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=YPIP275_RS23060;product=beta-ketoacyl-ACP synthase II;protein_id=WP_002213079.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 1653 2111 . + . ID=gene-YPIP275_RS23065;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS23065;old_locus_tag=YPIP275_1805 NZ_AAOS02000039.1 Protein Homology CDS 1653 2111 . + 0 ID=cds-WP_002213775.1-7;Parent=gene-YPIP275_RS23065;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS23065;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 2527 3333 . + . ID=gene-YPIP275_RS23070;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=YPIP275_RS23070;old_locus_tag=YPIP275_1806 NZ_AAOS02000039.1 Protein Homology CDS 2527 3333 . + 0 ID=cds-WP_002213080.1;Parent=gene-YPIP275_RS23070;Dbxref=GenBank:WP_002213080.1;Name=WP_002213080.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213080.1;locus_tag=YPIP275_RS23070;product=aminodeoxychorismate lyase;protein_id=WP_002213080.1;transl_table=11 NZ_AAOS02000039.1 RefSeq pseudogene 3369 3437 . - . ID=gene-YPIP275_RS29000;Name=YPIP275_RS29000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29000;partial=true;pseudo=true;start_range=.,3369 NZ_AAOS02000039.1 Protein Homology CDS 3369 3437 . - 0 ID=cds-YPIP275_RS29000;Parent=gene-YPIP275_RS29000;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378124.1;locus_tag=YPIP275_RS29000;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;start_range=.,3369;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 3622 4647 . + . ID=gene-YPIP275_RS23075;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=YPIP275_RS23075;old_locus_tag=YPIP275_1807 NZ_AAOS02000039.1 Protein Homology CDS 3622 4647 . + 0 ID=cds-WP_002217396.1;Parent=gene-YPIP275_RS23075;Dbxref=GenBank:WP_002217396.1;Name=WP_002217396.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217396.1;locus_tag=YPIP275_RS23075;product=endolytic transglycosylase MltG;protein_id=WP_002217396.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 4637 5275 . + . ID=gene-YPIP275_RS23080;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=YPIP275_RS23080;old_locus_tag=YPIP275_1808 NZ_AAOS02000039.1 Protein Homology CDS 4637 5275 . + 0 ID=cds-WP_002213082.1;Parent=gene-YPIP275_RS23080;Dbxref=GenBank:WP_002213082.1;Name=WP_002213082.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213082.1;locus_tag=YPIP275_RS23080;product=dTMP kinase;protein_id=WP_002213082.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 5275 6297 . + . ID=gene-YPIP275_RS23085;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=YPIP275_RS23085;old_locus_tag=YPIP275_1809 NZ_AAOS02000039.1 Protein Homology CDS 5275 6297 . + 0 ID=cds-WP_002213083.1;Parent=gene-YPIP275_RS23085;Dbxref=GenBank:WP_002213083.1;Name=WP_002213083.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104969.1;locus_tag=YPIP275_RS23085;product=DNA polymerase III subunit delta';protein_id=WP_002213083.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 6312 7121 . + . ID=gene-YPIP275_RS23090;Name=YPIP275_RS23090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23090;old_locus_tag=YPIP275_1810 NZ_AAOS02000039.1 Protein Homology CDS 6312 7121 . + 0 ID=cds-WP_002213084.1;Parent=gene-YPIP275_RS23090;Dbxref=GenBank:WP_002213084.1;Name=WP_002213084.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683960.1;locus_tag=YPIP275_RS23090;product=metal-dependent hydrolase;protein_id=WP_002213084.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 7427 8860 . + . ID=gene-YPIP275_RS23095;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=YPIP275_RS23095;old_locus_tag=YPIP275_1811 NZ_AAOS02000039.1 Protein Homology CDS 7427 8860 . + 0 ID=cds-WP_002213085.1;Parent=gene-YPIP275_RS23095;Dbxref=GenBank:WP_002213085.1;Name=WP_002213085.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1;locus_tag=YPIP275_RS23095;product=PTS glucose transporter subunit IIBC;protein_id=WP_002213085.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 9050 9508 . + . ID=gene-YPIP275_RS23100;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS23100;old_locus_tag=YPIP275_1812 NZ_AAOS02000039.1 Protein Homology CDS 9050 9508 . + 0 ID=cds-WP_002213759.1-3;Parent=gene-YPIP275_RS23100;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS23100;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 9951 10769 . + . ID=gene-YPIP275_RS23105;Name=YPIP275_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23105;old_locus_tag=YPIP275_1813 NZ_AAOS02000039.1 Protein Homology CDS 9951 10769 . + 0 ID=cds-WP_002215853.1;Parent=gene-YPIP275_RS23105;Dbxref=GenBank:WP_002215853.1;Name=WP_002215853.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005273077.1;locus_tag=YPIP275_RS23105;product=shikimate 5-dehydrogenase;protein_id=WP_002215853.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 10943 11296 . + . ID=gene-YPIP275_RS23110;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=YPIP275_RS23110;old_locus_tag=YPIP275_1814 NZ_AAOS02000039.1 Protein Homology CDS 10943 11296 . + 0 ID=cds-WP_002213087.1;Parent=gene-YPIP275_RS23110;Dbxref=GenBank:WP_002213087.1;Name=WP_002213087.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213087.1;locus_tag=YPIP275_RS23110;product=purine nucleoside phosphoramidase;protein_id=WP_002213087.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 11331 11720 . + . ID=gene-YPIP275_RS23115;Name=YPIP275_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23115;old_locus_tag=YPIP275_1815 NZ_AAOS02000039.1 Protein Homology CDS 11331 11720 . + 0 ID=cds-WP_002213088.1;Parent=gene-YPIP275_RS23115;Dbxref=GenBank:WP_002213088.1;Name=WP_002213088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303975.1;locus_tag=YPIP275_RS23115;product=YcfL family putative periplasmic lipoprotein;protein_id=WP_002213088.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 11761 12336 . + . ID=gene-YPIP275_RS23120;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=YPIP275_RS23120;old_locus_tag=YPIP275_1816 NZ_AAOS02000039.1 Protein Homology CDS 11761 12336 . + 0 ID=cds-WP_002213089.1;Parent=gene-YPIP275_RS23120;Dbxref=GenBank:WP_002213089.1;Name=WP_002213089.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192593.1;locus_tag=YPIP275_RS23120;product=penicillin-binding protein activator LpoB;protein_id=WP_002213089.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 12317 13183 . + . ID=gene-YPIP275_RS23125;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=YPIP275_RS23125;old_locus_tag=YPIP275_1817 NZ_AAOS02000039.1 Protein Homology CDS 12317 13183 . + 0 ID=cds-WP_002213090.1;Parent=gene-YPIP275_RS23125;Dbxref=GenBank:WP_002213090.1;Name=WP_002213090.1;Ontology_term=GO:0009228,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine biosynthetic process|0009228||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213090.1;locus_tag=YPIP275_RS23125;product=thiamine kinase;protein_id=WP_002213090.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 13266 14285 . + . ID=gene-YPIP275_RS23130;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=YPIP275_RS23130;old_locus_tag=YPIP275_1818 NZ_AAOS02000039.1 Protein Homology CDS 13266 14285 . + 0 ID=cds-WP_002215854.1;Parent=gene-YPIP275_RS23130;Dbxref=GenBank:WP_002215854.1;Name=WP_002215854.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215854.1;locus_tag=YPIP275_RS23130;product=beta-N-acetylhexosaminidase;protein_id=WP_002215854.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 14413 14955 . + . ID=gene-YPIP275_RS23135;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=YPIP275_RS23135;old_locus_tag=YPIP275_1819 NZ_AAOS02000039.1 Protein Homology CDS 14413 14955 . + 0 ID=cds-WP_002213095.1;Parent=gene-YPIP275_RS23135;Dbxref=GenBank:WP_002213095.1;Name=WP_002213095.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460180.1;locus_tag=YPIP275_RS23135;product=alpha/beta hydrolase YcfP;protein_id=WP_002213095.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 15330 16634 . + . ID=gene-YPIP275_RS23140;Name=YPIP275_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23140;old_locus_tag=YPIP275_1820 NZ_AAOS02000039.1 Protein Homology CDS 15330 16634 . + 0 ID=cds-WP_002213097.1;Parent=gene-YPIP275_RS23140;Dbxref=GenBank:WP_002213097.1;Name=WP_002213097.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683597.1;locus_tag=YPIP275_RS23140;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_002213097.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 17112 17741 . + . ID=gene-YPIP275_RS28040;Name=YPIP275_RS28040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28040 NZ_AAOS02000039.1 Protein Homology CDS 17112 17741 . + 0 ID=cds-WP_223871956.1;Parent=gene-YPIP275_RS28040;Dbxref=GenBank:WP_223871956.1;Name=WP_223871956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192591.1;locus_tag=YPIP275_RS28040;product=hypothetical protein;protein_id=WP_223871956.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 17749 18162 . + . ID=gene-YPIP275_RS23150;Name=YPIP275_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23150;old_locus_tag=YPIP275_1822 NZ_AAOS02000039.1 Protein Homology CDS 17749 18162 . + 0 ID=cds-WP_002213101.1;Parent=gene-YPIP275_RS23150;Dbxref=GenBank:WP_002213101.1;Name=WP_002213101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104974.1;locus_tag=YPIP275_RS23150;product=hypothetical protein;protein_id=WP_002213101.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 18258 19466 . + . ID=gene-YPIP275_RS23155;Name=YPIP275_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23155;old_locus_tag=YPIP275_1823 NZ_AAOS02000039.1 Protein Homology CDS 18258 19466 . + 0 ID=cds-WP_002209743.1-2;Parent=gene-YPIP275_RS23155;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS23155;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000039.1 RefSeq pseudogene 19533 19676 . - . ID=gene-YPIP275_RS28045;Name=YPIP275_RS28045;end_range=19676,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28045;old_locus_tag=YPIP275_1824;partial=true;pseudo=true NZ_AAOS02000039.1 Protein Homology CDS 19533 19676 . - 0 ID=cds-YPIP275_RS28045;Parent=gene-YPIP275_RS28045;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=19676,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611350.1;locus_tag=YPIP275_RS28045;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 19743 20030 . - . ID=gene-YPIP275_RS23160;Name=YPIP275_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23160;old_locus_tag=YPIP275_1825 NZ_AAOS02000039.1 Protein Homology CDS 19743 20030 . - 0 ID=cds-WP_002213107.1;Parent=gene-YPIP275_RS23160;Dbxref=GenBank:WP_002213107.1;Name=WP_002213107.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213107.1;locus_tag=YPIP275_RS23160;product=putative quinol monooxygenase;protein_id=WP_002213107.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 20265 21311 . + . ID=gene-YPIP275_RS23165;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=YPIP275_RS23165;old_locus_tag=YPIP275_1826 NZ_AAOS02000039.1 Protein Homology CDS 20265 21311 . + 0 ID=cds-WP_002213109.1;Parent=gene-YPIP275_RS23165;Dbxref=GenBank:WP_002213109.1;Name=WP_002213109.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192610.1;locus_tag=YPIP275_RS23165;product=dihydroorotase;protein_id=WP_002213109.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 21624 21869 . + . ID=gene-YPIP275_RS23170;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=YPIP275_RS23170;old_locus_tag=YPIP275_1828 NZ_AAOS02000039.1 Protein Homology CDS 21624 21869 . + 0 ID=cds-WP_002213110.1;Parent=gene-YPIP275_RS23170;Dbxref=GenBank:WP_002213110.1;Name=WP_002213110.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709658.1;locus_tag=YPIP275_RS23170;product=DNA damage-inducible protein I;protein_id=WP_002213110.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 22375 22671 . + . ID=gene-YPIP275_RS23180;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=YPIP275_RS23180 NZ_AAOS02000039.1 Protein Homology CDS 22375 22671 . + 0 ID=cds-WP_002217041.1;Parent=gene-YPIP275_RS23180;Dbxref=GenBank:WP_002217041.1;Name=WP_002217041.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217041.1;locus_tag=YPIP275_RS23180;product=biofilm formation regulator BssS;protein_id=WP_002217041.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 22634 23842 . - . ID=gene-YPIP275_RS23185;Name=YPIP275_RS23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23185;old_locus_tag=YPIP275_1829 NZ_AAOS02000039.1 Protein Homology CDS 22634 23842 . - 0 ID=cds-WP_002209743.1-3;Parent=gene-YPIP275_RS23185;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS23185;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 23867 25144 . + . ID=gene-YPIP275_RS23190;Name=YPIP275_RS23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23190;old_locus_tag=YPIP275_1830 NZ_AAOS02000039.1 Protein Homology CDS 23867 25144 . + 0 ID=cds-WP_042468818.1;Parent=gene-YPIP275_RS23190;Dbxref=GenBank:WP_042468818.1;Name=WP_042468818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105303.1;locus_tag=YPIP275_RS23190;product=MFS transporter;protein_id=WP_042468818.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 25222 27348 . + . ID=gene-YPIP275_RS23195;Name=YPIP275_RS23195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23195;old_locus_tag=YPIP275_1831 NZ_AAOS02000039.1 Protein Homology CDS 25222 27348 . + 0 ID=cds-WP_002213113.1;Parent=gene-YPIP275_RS23195;Dbxref=GenBank:WP_002213113.1;Name=WP_002213113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230722.1;locus_tag=YPIP275_RS23195;product=alpha-galactosidase;protein_id=WP_002213113.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 27735 28475 . - . ID=gene-YPIP275_RS23205;Name=YPIP275_RS23205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23205;old_locus_tag=YPIP275_1835 NZ_AAOS02000039.1 Protein Homology CDS 27735 28475 . - 0 ID=cds-WP_002213120.1;Parent=gene-YPIP275_RS23205;Dbxref=GenBank:WP_002213120.1;Name=WP_002213120.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213120.1;locus_tag=YPIP275_RS23205;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_002213120.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 28998 29990 . + . ID=gene-YPIP275_RS23210;Name=YPIP275_RS23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23210;old_locus_tag=YPIP275_1836 NZ_AAOS02000039.1 Protein Homology CDS 28998 29990 . + 0 ID=cds-WP_002213121.1;Parent=gene-YPIP275_RS23210;Dbxref=GenBank:WP_002213121.1;Name=WP_002213121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264778.1;locus_tag=YPIP275_RS23210;product=TRAP transporter substrate-binding protein;protein_id=WP_002213121.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 30114 30620 . + . ID=gene-YPIP275_RS23215;Name=YPIP275_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23215;old_locus_tag=YPIP275_1837 NZ_AAOS02000039.1 Protein Homology CDS 30114 30620 . + 0 ID=cds-WP_002213122.1;Parent=gene-YPIP275_RS23215;Dbxref=GenBank:WP_002213122.1;Name=WP_002213122.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213122.1;locus_tag=YPIP275_RS23215;product=TRAP transporter small permease;protein_id=WP_002213122.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 30640 31932 . + . ID=gene-YPIP275_RS23220;Name=YPIP275_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23220;old_locus_tag=YPIP275_1838 NZ_AAOS02000039.1 Protein Homology CDS 30640 31932 . + 0 ID=cds-WP_002213124.1;Parent=gene-YPIP275_RS23220;Dbxref=GenBank:WP_002213124.1;Name=WP_002213124.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213124.1;locus_tag=YPIP275_RS23220;product=TRAP transporter large permease;protein_id=WP_002213124.1;transl_table=11 NZ_AAOS02000039.1 RefSeq gene 32190 32819 . + . ID=gene-YPIP275_RS23225;Name=YPIP275_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23225;old_locus_tag=YPIP275_1839 NZ_AAOS02000039.1 Protein Homology CDS 32190 32819 . + 0 ID=cds-WP_002213125.1;Parent=gene-YPIP275_RS23225;Dbxref=GenBank:WP_002213125.1;Name=WP_002213125.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213125.1;locus_tag=YPIP275_RS23225;product=response regulator transcription factor;protein_id=WP_002213125.1;transl_table=11 ##sequence-region NZ_AAOS02000038.1 1 37950 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000038.1 RefSeq region 1 37950 . + . ID=NZ_AAOS02000038.1:1..37950;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000038.1 RefSeq gene 1 1538 . - . ID=gene-YPIP275_RS22845;Name=YPIP275_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22845;old_locus_tag=YPIP275_0781;partial=true;start_range=.,1 NZ_AAOS02000038.1 Protein Homology CDS 1 1538 . - 0 ID=cds-WP_002213010.1-2;Parent=gene-YPIP275_RS22845;Dbxref=GenBank:WP_002213010.1;Name=WP_002213010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683668.1;locus_tag=YPIP275_RS22845;partial=true;product=OmpA family protein;protein_id=WP_002213010.1;start_range=.,1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 1538 2224 . - . ID=gene-YPIP275_RS22850;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=YPIP275_RS22850;old_locus_tag=YPIP275_0782 NZ_AAOS02000038.1 Protein Homology CDS 1538 2224 . - 0 ID=cds-WP_002210015.1-2;Parent=gene-YPIP275_RS22850;Dbxref=GenBank:WP_002210015.1;Name=WP_002210015.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104585.1;locus_tag=YPIP275_RS22850;product=type VI secretion system protein TssL%2C short form;protein_id=WP_002210015.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 2221 3573 . - . ID=gene-YPIP275_RS22855;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=YPIP275_RS22855;old_locus_tag=YPIP275_0783 NZ_AAOS02000038.1 Protein Homology CDS 2221 3573 . - 0 ID=cds-WP_002213011.1;Parent=gene-YPIP275_RS22855;Dbxref=GenBank:WP_002213011.1;Name=WP_002213011.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213011.1;locus_tag=YPIP275_RS22855;product=type VI secretion system baseplate subunit TssK;protein_id=WP_002213011.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 3585 5135 . - . ID=gene-YPIP275_RS22860;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=YPIP275_RS22860;old_locus_tag=YPIP275_0784 NZ_AAOS02000038.1 Protein Homology CDS 3585 5135 . - 0 ID=cds-WP_002214707.1;Parent=gene-YPIP275_RS22860;Dbxref=GenBank:WP_002214707.1;Name=WP_002214707.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104626.1;locus_tag=YPIP275_RS22860;product=type VI secretion system contractile sheath large subunit;protein_id=WP_002214707.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 5178 5678 . - . ID=gene-YPIP275_RS22865;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=YPIP275_RS22865;old_locus_tag=YPIP275_0785 NZ_AAOS02000038.1 Protein Homology CDS 5178 5678 . - 0 ID=cds-WP_002213014.1;Parent=gene-YPIP275_RS22865;Dbxref=GenBank:WP_002213014.1;Name=WP_002213014.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213014.1;locus_tag=YPIP275_RS22865;product=type VI secretion system contractile sheath small subunit;protein_id=WP_002213014.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 6667 7515 . - . ID=gene-YPIP275_RS22875;Name=YPIP275_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22875;old_locus_tag=YPIP275_0786 NZ_AAOS02000038.1 Protein Homology CDS 6667 7515 . - 0 ID=cds-WP_002213016.1;Parent=gene-YPIP275_RS22875;Dbxref=GenBank:WP_002213016.1;Name=WP_002213016.1;Ontology_term=GO:0006633,GO:0004314,GO:0016740;gbkey=CDS;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA,transferase activity|0016740||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213016.1;locus_tag=YPIP275_RS22875;product=ACP S-malonyltransferase;protein_id=WP_002213016.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 7614 7862 . - . ID=gene-YPIP275_RS22880;Name=YPIP275_RS22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22880;old_locus_tag=YPIP275_0787 NZ_AAOS02000038.1 Protein Homology CDS 7614 7862 . - 0 ID=cds-WP_002213017.1;Parent=gene-YPIP275_RS22880;Dbxref=GenBank:WP_002213017.1;Name=WP_002213017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213017.1;locus_tag=YPIP275_RS22880;product=phosphopantetheine-binding protein;protein_id=WP_002213017.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 7900 8340 . - . ID=gene-YPIP275_RS22885;Name=YPIP275_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22885;old_locus_tag=YPIP275_0788 NZ_AAOS02000038.1 Protein Homology CDS 7900 8340 . - 0 ID=cds-WP_002228570.1;Parent=gene-YPIP275_RS22885;Dbxref=GenBank:WP_002228570.1;Name=WP_002228570.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228570.1;locus_tag=YPIP275_RS22885;product=lipocalin-like domain-containing protein;protein_id=WP_002228570.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 8427 9215 . - . ID=gene-YPIP275_RS22890;Name=YPIP275_RS22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22890;old_locus_tag=YPIP275_0791 NZ_AAOS02000038.1 Protein Homology CDS 8427 9215 . - 0 ID=cds-WP_002213024.1;Parent=gene-YPIP275_RS22890;Dbxref=GenBank:WP_002213024.1;Name=WP_002213024.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105361.1;locus_tag=YPIP275_RS22890;product=SDR family oxidoreductase;protein_id=WP_002213024.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 9218 9970 . - . ID=gene-YPIP275_RS22895;Name=YPIP275_RS22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22895;old_locus_tag=YPIP275_0792 NZ_AAOS02000038.1 Protein Homology CDS 9218 9970 . - 0 ID=cds-WP_002213025.1;Parent=gene-YPIP275_RS22895;Dbxref=GenBank:WP_002213025.1;Name=WP_002213025.1;Ontology_term=GO:0006633,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229846.1;locus_tag=YPIP275_RS22895;product=polyketide synthase;protein_id=WP_002213025.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 9972 10691 . - . ID=gene-YPIP275_RS22900;Name=YPIP275_RS22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22900;old_locus_tag=YPIP275_0793 NZ_AAOS02000038.1 Protein Homology CDS 9972 10691 . - 0 ID=cds-WP_002213026.1;Parent=gene-YPIP275_RS22900;Dbxref=GenBank:WP_002213026.1;Name=WP_002213026.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014462326.1;locus_tag=YPIP275_RS22900;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_002213026.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 10684 11922 . - . ID=gene-YPIP275_RS22905;Name=YPIP275_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22905;old_locus_tag=YPIP275_0794 NZ_AAOS02000038.1 Protein Homology CDS 10684 11922 . - 0 ID=cds-WP_002213028.1;Parent=gene-YPIP275_RS22905;Dbxref=GenBank:WP_002213028.1;Name=WP_002213028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213028.1;locus_tag=YPIP275_RS22905;product=hydroxymethylglutaryl-CoA synthase family protein;protein_id=WP_002213028.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 11938 12675 . - . ID=gene-YPIP275_RS22910;Name=YPIP275_RS22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22910;old_locus_tag=YPIP275_0795 NZ_AAOS02000038.1 Protein Homology CDS 11938 12675 . - 0 ID=cds-WP_002213030.1;Parent=gene-YPIP275_RS22910;Dbxref=GenBank:WP_002213030.1;Name=WP_002213030.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105362.1;locus_tag=YPIP275_RS22910;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_002213030.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 12677 13960 . - . ID=gene-YPIP275_RS22915;Name=YPIP275_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22915;old_locus_tag=YPIP275_0796 NZ_AAOS02000038.1 Protein Homology CDS 12677 13960 . - 0 ID=cds-WP_002213032.1;Parent=gene-YPIP275_RS22915;Dbxref=GenBank:WP_002213032.1;Name=WP_002213032.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213032.1;locus_tag=YPIP275_RS22915;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=WP_002213032.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 13950 14474 . - . ID=gene-YPIP275_RS22920;Name=YPIP275_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22920;old_locus_tag=YPIP275_0797 NZ_AAOS02000038.1 Protein Homology CDS 13950 14474 . - 0 ID=cds-WP_002213034.1;Parent=gene-YPIP275_RS22920;Dbxref=GenBank:WP_002213034.1;Name=WP_002213034.1;Ontology_term=GO:0006633,GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213034.1;locus_tag=YPIP275_RS22920;product=3-hydroxyacyl-ACP dehydratase FabZ family protein;protein_id=WP_002213034.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 14738 14956 . - . ID=gene-YPIP275_RS22925;Name=YPIP275_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22925;old_locus_tag=YPIP275_0798 NZ_AAOS02000038.1 Protein Homology CDS 14738 14956 . - 0 ID=cds-WP_002213036.1;Parent=gene-YPIP275_RS22925;Dbxref=GenBank:WP_002213036.1;Name=WP_002213036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213036.1;locus_tag=YPIP275_RS22925;product=hypothetical protein;protein_id=WP_002213036.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 15687 16433 . + . ID=gene-YPIP275_RS22930;Name=YPIP275_RS22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22930;old_locus_tag=YPIP275_0799 NZ_AAOS02000038.1 Protein Homology CDS 15687 16433 . + 0 ID=cds-WP_002213038.1;Parent=gene-YPIP275_RS22930;Dbxref=GenBank:WP_002213038.1;Name=WP_002213038.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002402194.1;locus_tag=YPIP275_RS22930;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_002213038.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 16587 19004 . + . ID=gene-YPIP275_RS22935;Name=YPIP275_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22935;old_locus_tag=YPIP275_0800 NZ_AAOS02000038.1 Protein Homology CDS 16587 19004 . + 0 ID=cds-WP_002213039.1;Parent=gene-YPIP275_RS22935;Dbxref=GenBank:WP_002213039.1;Name=WP_002213039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683670.1;locus_tag=YPIP275_RS22935;product=GNAT family N-acetyltransferase;protein_id=WP_002213039.1;transl_table=11 NZ_AAOS02000038.1 RefSeq pseudogene 19135 21245 . - . ID=gene-YPIP275_RS28990;Name=cnfy;gbkey=Gene;gene=cnfy;gene_biotype=pseudogene;locus_tag=YPIP275_RS28990;old_locus_tag=YPIP275_0801;partial=true;pseudo=true;start_range=.,19135 NZ_AAOS02000038.1 Protein Homology CDS 19135 21245 . - 0 ID=cds-YPIP275_RS28990;Parent=gene-YPIP275_RS28990;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=cnfy;inference=COORDINATES: similar to AA sequence:RefSeq:WP_111779455.1;locus_tag=YPIP275_RS28990;partial=true;product=cytotoxic necrotizing factor CNFY;pseudo=true;start_range=.,19135;transl_table=11 NZ_AAOS02000038.1 RefSeq pseudogene 21648 22141 . - . ID=gene-YPIP275_RS28995;Name=YPIP275_RS28995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28995;partial=true;pseudo=true;start_range=.,21648 NZ_AAOS02000038.1 Protein Homology CDS 21648 22141 . - 0 ID=cds-YPIP275_RS28995;Parent=gene-YPIP275_RS28995;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013183171.1;locus_tag=YPIP275_RS28995;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,21648;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 22322 22409 . - . ID=gene-YPIP275_RS22960;Name=YPIP275_RS22960;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS22960;old_locus_tag=YPIP275_0804 NZ_AAOS02000038.1 tRNAscan-SE tRNA 22322 22409 . - . ID=rna-YPIP275_RS22960;Parent=gene-YPIP275_RS22960;anticodon=(pos:complement(22373..22375));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS22960;product=tRNA-Ser NZ_AAOS02000038.1 tRNAscan-SE exon 22322 22409 . - . ID=exon-YPIP275_RS22960-1;Parent=rna-YPIP275_RS22960;anticodon=(pos:complement(22373..22375));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS22960;product=tRNA-Ser NZ_AAOS02000038.1 RefSeq gene 22650 22979 . + . ID=gene-YPIP275_RS22965;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=YPIP275_RS22965;old_locus_tag=YPIP275_0806 NZ_AAOS02000038.1 Protein Homology CDS 22650 22979 . + 0 ID=cds-WP_002213046.1;Parent=gene-YPIP275_RS22965;Dbxref=GenBank:WP_002213046.1;Name=WP_002213046.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970590.1;locus_tag=YPIP275_RS22965;product=sulfurtransferase TusE;protein_id=WP_002213046.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 23031 23309 . - . ID=gene-YPIP275_RS22970;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=YPIP275_RS22970;old_locus_tag=YPIP275_0807 NZ_AAOS02000038.1 Protein Homology CDS 23031 23309 . - 0 ID=cds-WP_002213049.1;Parent=gene-YPIP275_RS22970;Dbxref=GenBank:WP_002213049.1;Name=WP_002213049.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213049.1;locus_tag=YPIP275_RS22970;product=acylphosphatase;protein_id=WP_002213049.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 23403 24593 . + . ID=gene-YPIP275_RS22975;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=YPIP275_RS22975;old_locus_tag=YPIP275_0808 NZ_AAOS02000038.1 Protein Homology CDS 23403 24593 . + 0 ID=cds-WP_002213052.1;Parent=gene-YPIP275_RS22975;Dbxref=GenBank:WP_002213052.1;Name=WP_002213052.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006320713.1;locus_tag=YPIP275_RS22975;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_002213052.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 24654 24971 . + . ID=gene-YPIP275_RS22980;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS22980;old_locus_tag=YPIP275_0809 NZ_AAOS02000038.1 Protein Homology CDS 24654 24971 . + 0 ID=cds-WP_002213054.1;Parent=gene-YPIP275_RS22980;Dbxref=GenBank:WP_002213054.1;Name=WP_002213054.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226173.1;locus_tag=YPIP275_RS22980;product=heat shock protein HspQ;protein_id=WP_002213054.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 25080 25496 . - . ID=gene-YPIP275_RS22985;Name=YPIP275_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22985;old_locus_tag=YPIP275_0810 NZ_AAOS02000038.1 Protein Homology CDS 25080 25496 . - 0 ID=cds-WP_002213056.1;Parent=gene-YPIP275_RS22985;Dbxref=GenBank:WP_002213056.1;Name=WP_002213056.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700098.1;locus_tag=YPIP275_RS22985;product=CoA-binding protein;protein_id=WP_002213056.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 25812 26492 . + . ID=gene-YPIP275_RS22990;Name=YPIP275_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22990;old_locus_tag=YPIP275_0811 NZ_AAOS02000038.1 Protein Homology CDS 25812 26492 . + 0 ID=cds-WP_002213058.1;Parent=gene-YPIP275_RS22990;Dbxref=GenBank:WP_002213058.1;Name=WP_002213058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213058.1;locus_tag=YPIP275_RS22990;product=DUF2057 family protein;protein_id=WP_002213058.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 26671 27135 . + . ID=gene-YPIP275_RS22995;Name=YPIP275_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22995;old_locus_tag=YPIP275_0812 NZ_AAOS02000038.1 Protein Homology CDS 26671 27135 . + 0 ID=cds-WP_002213060.1;Parent=gene-YPIP275_RS22995;Dbxref=GenBank:WP_002213060.1;Name=WP_002213060.1;Ontology_term=GO:0019242,GO:0008929;gbkey=CDS;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213060.1;locus_tag=YPIP275_RS22995;product=methylglyoxal synthase;protein_id=WP_002213060.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 27196 29181 . - . ID=gene-YPIP275_RS23000;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=YPIP275_RS23000;old_locus_tag=YPIP275_0813 NZ_AAOS02000038.1 Protein Homology CDS 27196 29181 . - 0 ID=cds-WP_002213061.1;Parent=gene-YPIP275_RS23000;Dbxref=GenBank:WP_002213061.1;Name=WP_002213061.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279909.1;locus_tag=YPIP275_RS23000;product=DNA helicase IV;protein_id=WP_002213061.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 29375 29821 . + . ID=gene-YPIP275_RS23005;Name=YPIP275_RS23005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23005;old_locus_tag=YPIP275_0814 NZ_AAOS02000038.1 Protein Homology CDS 29375 29821 . + 0 ID=cds-WP_002213062.1;Parent=gene-YPIP275_RS23005;Dbxref=GenBank:WP_002213062.1;Name=WP_002213062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213062.1;locus_tag=YPIP275_RS23005;product=YccF domain-containing protein;protein_id=WP_002213062.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 29851 31989 . + . ID=gene-YPIP275_RS23010;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=YPIP275_RS23010;old_locus_tag=YPIP275_0815 NZ_AAOS02000038.1 Protein Homology CDS 29851 31989 . + 0 ID=cds-WP_002213063.1;Parent=gene-YPIP275_RS23010;Dbxref=GenBank:WP_002213063.1;Name=WP_002213063.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192070.1;locus_tag=YPIP275_RS23010;product=YccS family putative transporter;protein_id=WP_002213063.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 32091 32726 . - . ID=gene-YPIP275_RS23015;Name=YPIP275_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23015;old_locus_tag=YPIP275_0816 NZ_AAOS02000038.1 Protein Homology CDS 32091 32726 . - 0 ID=cds-WP_002213064.1;Parent=gene-YPIP275_RS23015;Dbxref=GenBank:WP_002213064.1;Name=WP_002213064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213064.1;locus_tag=YPIP275_RS23015;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_002213064.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 32955 33461 . + . ID=gene-YPIP275_RS23020;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=YPIP275_RS23020;old_locus_tag=YPIP275_0817 NZ_AAOS02000038.1 Protein Homology CDS 32955 33461 . + 0 ID=cds-WP_002213065.1;Parent=gene-YPIP275_RS23020;Dbxref=GenBank:WP_002213065.1;Name=WP_002213065.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192069.1;locus_tag=YPIP275_RS23020;product=SOS-induced cell division inhibitor SulA;protein_id=WP_002213065.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 33819 34880 . + . ID=gene-YPIP275_RS23025;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=YPIP275_RS23025;old_locus_tag=YPIP275_0818 NZ_AAOS02000038.1 Protein Homology CDS 33819 34880 . + 0 ID=cds-WP_002213066.1;Parent=gene-YPIP275_RS23025;Dbxref=GenBank:WP_002213066.1;Name=WP_002213066.1;Ontology_term=GO:0015288;gbkey=CDS;gene=ompA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213066.1;locus_tag=YPIP275_RS23025;product=porin OmpA;protein_id=WP_002213066.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 35070 35528 . + . ID=gene-YPIP275_RS23035;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS23035;old_locus_tag=YPIP275_0819 NZ_AAOS02000038.1 Protein Homology CDS 35070 35528 . + 0 ID=cds-WP_002213775.1-8;Parent=gene-YPIP275_RS23035;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS23035;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 35697 36152 . - . ID=gene-YPIP275_RS23040;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=YPIP275_RS23040;old_locus_tag=YPIP275_0820 NZ_AAOS02000038.1 Protein Homology CDS 35697 36152 . - 0 ID=cds-WP_002226586.1;Parent=gene-YPIP275_RS23040;Dbxref=GenBank:WP_002226586.1;Name=WP_002226586.1;Ontology_term=GO:0006274,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002226586.1;locus_tag=YPIP275_RS23040;product=macrodomain Ter protein MatP;protein_id=WP_002226586.1;transl_table=11 NZ_AAOS02000038.1 RefSeq gene 36363 37950 . + . ID=gene-YPIP275_RS23045;Name=YPIP275_RS23045;end_range=37950,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS23045;old_locus_tag=YPIP275_0822;partial=true NZ_AAOS02000038.1 Protein Homology CDS 36363 37950 . + 0 ID=cds-WP_002213071.1;Parent=gene-YPIP275_RS23045;Dbxref=GenBank:WP_002213071.1;Name=WP_002213071.1;end_range=37950,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005184605.1;locus_tag=YPIP275_RS23045;partial=true;product=AAA family ATPase;protein_id=WP_002213071.1;transl_table=11 ##sequence-region NZ_AAOS02000037.1 1 38129 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000037.1 RefSeq region 1 38129 . + . ID=NZ_AAOS02000037.1:1..38129;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000037.1 RefSeq pseudogene 1 519 . + . ID=gene-YPIP275_RS22580;Name=yopH;gbkey=Gene;gene=yopH;gene_biotype=pseudogene;locus_tag=YPIP275_RS22580;old_locus_tag=YPIP275_1544;partial=true;pseudo=true;start_range=.,1 NZ_AAOS02000037.1 Protein Homology CDS 1 519 . + 0 ID=cds-YPIP275_RS22580;Parent=gene-YPIP275_RS22580;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=yopH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213278.1;locus_tag=YPIP275_RS22580;partial=true;product=T3SS effector protein-tyrosine-phosphatase YopH;pseudo=true;start_range=.,1;transl_table=11 NZ_AAOS02000037.1 RefSeq pseudogene 740 1012 . - . ID=gene-YPIP275_RS28000;Name=YPIP275_RS28000;end_range=1012,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28000;old_locus_tag=YPIP275_1545;partial=true;pseudo=true NZ_AAOS02000037.1 Protein Homology CDS 740 1012 . - 0 ID=cds-YPIP275_RS28000;Parent=gene-YPIP275_RS28000;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1012,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS28000;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_AAOS02000037.1 RefSeq pseudogene 1031 2060 . - . ID=gene-YPIP275_RS28975;Name=YPIP275_RS28975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28975;pseudo=true NZ_AAOS02000037.1 Protein Homology CDS 1031 2060 . - 0 ID=cds-YPIP275_RS28975;Parent=gene-YPIP275_RS28975;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611456.1;locus_tag=YPIP275_RS28975;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 2608 2955 . - . ID=gene-YPIP275_RS22600;Name=lcrQ;gbkey=Gene;gene=lcrQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS22600;old_locus_tag=YPIP275_1549 NZ_AAOS02000037.1 Protein Homology CDS 2608 2955 . - 0 ID=cds-WP_002212907.1;Parent=gene-YPIP275_RS22600;Dbxref=GenBank:WP_002212907.1;Name=WP_002212907.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;gene=lcrQ;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212907.1;locus_tag=YPIP275_RS22600;product=type III secretion system exported negative regulator LcrQ/YscM1;protein_id=WP_002212907.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 3180 3845 . - . ID=gene-YPIP275_RS22605;Name=yscL;gbkey=Gene;gene=yscL;gene_biotype=protein_coding;locus_tag=YPIP275_RS22605;old_locus_tag=YPIP275_1550 NZ_AAOS02000037.1 Protein Homology CDS 3180 3845 . - 0 ID=cds-WP_010981371.1;Parent=gene-YPIP275_RS22605;Dbxref=GenBank:WP_010981371.1;Name=WP_010981371.1;gbkey=CDS;gene=yscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010981371.1;locus_tag=YPIP275_RS22605;product=SctL family type III secretion system stator protein YscL;protein_id=WP_010981371.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 3791 4420 . - . ID=gene-YPIP275_RS22610;Name=yscK;gbkey=Gene;gene=yscK;gene_biotype=protein_coding;gene_synonym=sctK;locus_tag=YPIP275_RS22610;old_locus_tag=YPIP275_1551 NZ_AAOS02000037.1 Protein Homology CDS 3791 4420 . - 0 ID=cds-WP_002361471.1;Parent=gene-YPIP275_RS22610;Dbxref=GenBank:WP_002361471.1;Name=WP_002361471.1;gbkey=CDS;gene=yscK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002361471.1;locus_tag=YPIP275_RS22610;product=SctK family type III secretion system sorting platform protein YscK;protein_id=WP_002361471.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 4420 5154 . - . ID=gene-YPIP275_RS22615;Name=yscJ;gbkey=Gene;gene=yscJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS22615;old_locus_tag=YPIP275_1552 NZ_AAOS02000037.1 Protein Homology CDS 4420 5154 . - 0 ID=cds-WP_002212912.1;Parent=gene-YPIP275_RS22615;Dbxref=GenBank:WP_002212912.1;Name=WP_002212912.1;gbkey=CDS;gene=yscJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212912.1;locus_tag=YPIP275_RS22615;product=SctJ family type III secretion inner membrane ring lipoprotein YscJ;protein_id=WP_002212912.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 5161 5508 . - . ID=gene-YPIP275_RS22620;Name=lcrO;gbkey=Gene;gene=lcrO;gene_biotype=protein_coding;gene_synonym=yscI;locus_tag=YPIP275_RS22620;old_locus_tag=YPIP275_1553 NZ_AAOS02000037.1 Protein Homology CDS 5161 5508 . - 0 ID=cds-WP_002212914.1;Parent=gene-YPIP275_RS22620;Dbxref=GenBank:WP_002212914.1;Name=WP_002212914.1;gbkey=CDS;gene=lcrO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212914.1;locus_tag=YPIP275_RS22620;product=SctI family type III secretion system inner rod subunit LcrO;protein_id=WP_002212914.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 5509 6006 . - . ID=gene-YPIP275_RS22625;Name=yopR;gbkey=Gene;gene=yopR;gene_biotype=protein_coding;gene_synonym=yscH;locus_tag=YPIP275_RS22625;old_locus_tag=YPIP275_1554 NZ_AAOS02000037.1 Protein Homology CDS 5509 6006 . - 0 ID=cds-WP_002212915.1;Parent=gene-YPIP275_RS22625;Dbxref=GenBank:WP_002212915.1;Name=WP_002212915.1;gbkey=CDS;gene=yopR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212915.1;locus_tag=YPIP275_RS22625;product=T3SS polymerization control protein YopR;protein_id=WP_002212915.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 6003 6350 . - . ID=gene-YPIP275_RS22630;Name=yscG;gbkey=Gene;gene=yscG;gene_biotype=protein_coding;locus_tag=YPIP275_RS22630 NZ_AAOS02000037.1 Protein Homology CDS 6003 6350 . - 0 ID=cds-WP_002229801.1;Parent=gene-YPIP275_RS22630;Dbxref=GenBank:WP_002229801.1;Name=WP_002229801.1;gbkey=CDS;gene=yscG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229801.1;locus_tag=YPIP275_RS22630;product=type III secretion system chaperone YscG;protein_id=WP_002229801.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 6352 6615 . - . ID=gene-YPIP275_RS22635;Name=yscF;gbkey=Gene;gene=yscF;gene_biotype=protein_coding;locus_tag=YPIP275_RS22635;old_locus_tag=YPIP275_1555 NZ_AAOS02000037.1 Protein Homology CDS 6352 6615 . - 0 ID=cds-WP_002212916.1;Parent=gene-YPIP275_RS22635;Dbxref=GenBank:WP_002212916.1;Name=WP_002212916.1;gbkey=CDS;gene=yscF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212916.1;locus_tag=YPIP275_RS22635;product=type III secretion system needle filament protein YscF;protein_id=WP_002212916.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 6616 6816 . - . ID=gene-YPIP275_RS22640;Name=yscE;gbkey=Gene;gene=yscE;gene_biotype=protein_coding;locus_tag=YPIP275_RS22640;old_locus_tag=YPIP275_1556 NZ_AAOS02000037.1 Protein Homology CDS 6616 6816 . - 0 ID=cds-WP_002212917.1;Parent=gene-YPIP275_RS22640;Dbxref=GenBank:WP_002212917.1;Name=WP_002212917.1;gbkey=CDS;gene=yscE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212917.1;locus_tag=YPIP275_RS22640;product=type III secretion system co-chaperone YscE;protein_id=WP_002212917.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 6813 8072 . - . ID=gene-YPIP275_RS22645;Name=yscD;gbkey=Gene;gene=yscD;gene_biotype=protein_coding;locus_tag=YPIP275_RS22645;old_locus_tag=YPIP275_1557 NZ_AAOS02000037.1 Protein Homology CDS 6813 8072 . - 0 ID=cds-WP_002212919.1;Parent=gene-YPIP275_RS22645;Dbxref=GenBank:WP_002212919.1;Name=WP_002212919.1;gbkey=CDS;gene=yscD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212919.1;locus_tag=YPIP275_RS22645;product=SctD family type III secretion system inner membrane ring subunit YscD;protein_id=WP_002212919.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 8069 9892 . - . ID=gene-YPIP275_RS22650;Name=yscC;gbkey=Gene;gene=yscC;gene_biotype=protein_coding;locus_tag=YPIP275_RS22650;old_locus_tag=YPIP275_1558 NZ_AAOS02000037.1 Protein Homology CDS 8069 9892 . - 0 ID=cds-WP_002212923.1;Parent=gene-YPIP275_RS22650;Dbxref=GenBank:WP_002212923.1;Name=WP_002212923.1;gbkey=CDS;gene=yscC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212923.1;locus_tag=YPIP275_RS22650;product=SctC family type III secretion system outer membrane ring subunit YscC;protein_id=WP_002212923.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 9898 10311 . - . ID=gene-YPIP275_RS22655;Name=yscB;gbkey=Gene;gene=yscB;gene_biotype=protein_coding;locus_tag=YPIP275_RS22655;old_locus_tag=YPIP275_1560 NZ_AAOS02000037.1 Protein Homology CDS 9898 10311 . - 0 ID=cds-WP_002212925.1;Parent=gene-YPIP275_RS22655;Dbxref=GenBank:WP_002212925.1;Name=WP_002212925.1;gbkey=CDS;gene=yscB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212925.1;locus_tag=YPIP275_RS22655;product=type III secretion system chaperone YscB;protein_id=WP_002212925.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 10537 10635 . - . ID=gene-YPIP275_RS22660;Name=yscA;gbkey=Gene;gene=yscA;gene_biotype=protein_coding;locus_tag=YPIP275_RS22660 NZ_AAOS02000037.1 Protein Homology CDS 10537 10635 . - 0 ID=cds-WP_002229797.1;Parent=gene-YPIP275_RS22660;Dbxref=GenBank:WP_002229797.1;Name=WP_002229797.1;gbkey=CDS;gene=yscA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229797.1;locus_tag=YPIP275_RS22660;product=type III secretion system protein YscA;protein_id=WP_002229797.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 10714 11529 . - . ID=gene-YPIP275_RS22665;Name=virF;gbkey=Gene;gene=virF;gene_biotype=protein_coding;locus_tag=YPIP275_RS22665;old_locus_tag=YPIP275_1561 NZ_AAOS02000037.1 Protein Homology CDS 10714 11529 . - 0 ID=cds-WP_002212931.1;Parent=gene-YPIP275_RS22665;Dbxref=GenBank:WP_002212931.1;Name=WP_002212931.1;gbkey=CDS;gene=virF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010891222.1;locus_tag=YPIP275_RS22665;product=virulence regulon transcriptional activator VirF;protein_id=WP_002212931.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 11653 12048 . - . ID=gene-YPIP275_RS22670;Name=yscW;gbkey=Gene;gene=yscW;gene_biotype=protein_coding;locus_tag=YPIP275_RS22670 NZ_AAOS02000037.1 Protein Homology CDS 11653 12048 . - 0 ID=cds-WP_002222527.1;Parent=gene-YPIP275_RS22670;Dbxref=GenBank:WP_002222527.1;Name=WP_002222527.1;gbkey=CDS;gene=yscW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222527.1;locus_tag=YPIP275_RS22670;product=type III secretion system pilotin YscW;protein_id=WP_002222527.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 12624 13688 . - . ID=gene-YPIP275_RS22675;Name=yscU;gbkey=Gene;gene=yscU;gene_biotype=protein_coding;locus_tag=YPIP275_RS22675;old_locus_tag=YPIP275_1562 NZ_AAOS02000037.1 Protein Homology CDS 12624 13688 . - 0 ID=cds-WP_002212936.1;Parent=gene-YPIP275_RS22675;Dbxref=GenBank:WP_002212936.1;Name=WP_002212936.1;gbkey=CDS;gene=yscU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212936.1;locus_tag=YPIP275_RS22675;product=type III secretion system export apparatus switch protein YscU;protein_id=WP_002212936.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 13688 14473 . - . ID=gene-YPIP275_RS22680;Name=yscT;gbkey=Gene;gene=yscT;gene_biotype=protein_coding;locus_tag=YPIP275_RS22680;old_locus_tag=YPIP275_1563 NZ_AAOS02000037.1 Protein Homology CDS 13688 14473 . - 0 ID=cds-WP_002212938.1;Parent=gene-YPIP275_RS22680;Dbxref=GenBank:WP_002212938.1;Name=WP_002212938.1;gbkey=CDS;gene=yscT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212938.1;locus_tag=YPIP275_RS22680;product=SctT family type III secretion system export apparatus subunit YscT;protein_id=WP_002212938.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 14470 14736 . - . ID=gene-YPIP275_RS22685;Name=yscS;gbkey=Gene;gene=yscS;gene_biotype=protein_coding;locus_tag=YPIP275_RS22685;old_locus_tag=YPIP275_1564 NZ_AAOS02000037.1 Protein Homology CDS 14470 14736 . - 0 ID=cds-WP_002212945.1;Parent=gene-YPIP275_RS22685;Dbxref=GenBank:WP_002212945.1;Name=WP_002212945.1;gbkey=CDS;gene=yscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212945.1;locus_tag=YPIP275_RS22685;product=SctS family type III secretion system export apparatus subunit YscS;protein_id=WP_002212945.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 14738 15391 . - . ID=gene-YPIP275_RS22690;Name=yscR;gbkey=Gene;gene=yscR;gene_biotype=protein_coding;locus_tag=YPIP275_RS22690;old_locus_tag=YPIP275_1565 NZ_AAOS02000037.1 Protein Homology CDS 14738 15391 . - 0 ID=cds-WP_002212947.1;Parent=gene-YPIP275_RS22690;Dbxref=GenBank:WP_002212947.1;Name=WP_002212947.1;gbkey=CDS;gene=yscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212947.1;locus_tag=YPIP275_RS22690;product=SctR family type III secretion system export apparatus subunit YscR;protein_id=WP_002212947.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 15388 16311 . - . ID=gene-YPIP275_RS22695;Name=yscQ;gbkey=Gene;gene=yscQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS22695;old_locus_tag=YPIP275_1566 NZ_AAOS02000037.1 Protein Homology CDS 15388 16311 . - 0 ID=cds-WP_002212948.1;Parent=gene-YPIP275_RS22695;Dbxref=GenBank:WP_002212948.1;Name=WP_002212948.1;gbkey=CDS;gene=yscQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212948.1;locus_tag=YPIP275_RS22695;product=SctQ family type III secretion system cytoplasmic ring protein YscQ;protein_id=WP_002212948.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 16308 17675 . - . ID=gene-YPIP275_RS22700;Name=yscP;gbkey=Gene;gene=yscP;gene_biotype=protein_coding;locus_tag=YPIP275_RS22700;old_locus_tag=YPIP275_1567 NZ_AAOS02000037.1 Protein Homology CDS 16308 17675 . - 0 ID=cds-WP_002212950.1;Parent=gene-YPIP275_RS22700;Dbxref=GenBank:WP_002212950.1;Name=WP_002212950.1;gbkey=CDS;gene=yscP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212950.1;locus_tag=YPIP275_RS22700;product=type III secretion system needle length determinant YscP;protein_id=WP_002212950.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 17675 18139 . - . ID=gene-YPIP275_RS22705;Name=yscO;gbkey=Gene;gene=yscO;gene_biotype=protein_coding;locus_tag=YPIP275_RS22705;old_locus_tag=YPIP275_1568 NZ_AAOS02000037.1 Protein Homology CDS 17675 18139 . - 0 ID=cds-WP_002212952.1;Parent=gene-YPIP275_RS22705;Dbxref=GenBank:WP_002212952.1;Name=WP_002212952.1;gbkey=CDS;gene=yscO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005176819.1;locus_tag=YPIP275_RS22705;product=type III secretion system central stalk protein YscO;protein_id=WP_002212952.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 18136 19455 . - . ID=gene-YPIP275_RS22710;Name=yscN;gbkey=Gene;gene=yscN;gene_biotype=protein_coding;locus_tag=YPIP275_RS22710;old_locus_tag=YPIP275_1569 NZ_AAOS02000037.1 Protein Homology CDS 18136 19455 . - 0 ID=cds-WP_002212955.1;Parent=gene-YPIP275_RS22710;Dbxref=GenBank:WP_002212955.1;Name=WP_002212955.1;gbkey=CDS;gene=yscN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212955.1;locus_tag=YPIP275_RS22710;product=SctN family type III secretion system ATPase YscN;protein_id=WP_002212955.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 19653 20534 . + . ID=gene-YPIP275_RS22715;Name=yopN;gbkey=Gene;gene=yopN;gene_biotype=protein_coding;locus_tag=YPIP275_RS22715;old_locus_tag=YPIP275_1570 NZ_AAOS02000037.1 Protein Homology CDS 19653 20534 . + 0 ID=cds-WP_002212958.1;Parent=gene-YPIP275_RS22715;Dbxref=GenBank:WP_002212958.1;Name=WP_002212958.1;gbkey=CDS;gene=yopN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191384.1;locus_tag=YPIP275_RS22715;product=SctW family type III secretion system gatekeeper subunit YopN;protein_id=WP_002212958.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 20515 20793 . + . ID=gene-YPIP275_RS22720;Name=tyeA;gbkey=Gene;gene=tyeA;gene_biotype=protein_coding;locus_tag=YPIP275_RS22720;old_locus_tag=YPIP275_1571 NZ_AAOS02000037.1 Protein Homology CDS 20515 20793 . + 0 ID=cds-WP_002212965.1;Parent=gene-YPIP275_RS22720;Dbxref=GenBank:WP_002212965.1;Name=WP_002212965.1;gbkey=CDS;gene=tyeA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212965.1;locus_tag=YPIP275_RS22720;product=type III secretion system gatekeeper subunit TyeA;protein_id=WP_002212965.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 20780 21151 . + . ID=gene-YPIP275_RS22725;Name=sycN;gbkey=Gene;gene=sycN;gene_biotype=protein_coding;locus_tag=YPIP275_RS22725;old_locus_tag=YPIP275_1572 NZ_AAOS02000037.1 Protein Homology CDS 20780 21151 . + 0 ID=cds-WP_002229794.1;Parent=gene-YPIP275_RS22725;Dbxref=GenBank:WP_002229794.1;Name=WP_002229794.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sycN;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229794.1;locus_tag=YPIP275_RS22725;product=type III secretion chaperone SycN;protein_id=WP_002229794.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 21148 21516 . + . ID=gene-YPIP275_RS22730;Name=yscX;gbkey=Gene;gene=yscX;gene_biotype=protein_coding;locus_tag=YPIP275_RS22730;old_locus_tag=YPIP275_1573 NZ_AAOS02000037.1 Protein Homology CDS 21148 21516 . + 0 ID=cds-WP_002212969.1;Parent=gene-YPIP275_RS22730;Dbxref=GenBank:WP_002212969.1;Name=WP_002212969.1;gbkey=CDS;gene=yscX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212969.1;locus_tag=YPIP275_RS22730;product=type III secretion system protein YscX;protein_id=WP_002212969.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 21513 21857 . + . ID=gene-YPIP275_RS22735;Name=yscY;gbkey=Gene;gene=yscY;gene_biotype=protein_coding;locus_tag=YPIP275_RS22735;old_locus_tag=YPIP275_1574 NZ_AAOS02000037.1 Protein Homology CDS 21513 21857 . + 0 ID=cds-WP_002229791.1;Parent=gene-YPIP275_RS22735;Dbxref=GenBank:WP_002229791.1;Name=WP_002229791.1;gbkey=CDS;gene=yscY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229791.1;locus_tag=YPIP275_RS22735;product=type III secretion system chaperone YscY;protein_id=WP_002229791.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 21844 23958 . + . ID=gene-YPIP275_RS22740;Name=lcrD;gbkey=Gene;gene=lcrD;gene_biotype=protein_coding;locus_tag=YPIP275_RS22740;old_locus_tag=YPIP275_1575 NZ_AAOS02000037.1 Protein Homology CDS 21844 23958 . + 0 ID=cds-WP_002212971.1;Parent=gene-YPIP275_RS22740;Dbxref=GenBank:WP_002212971.1;Name=WP_002212971.1;gbkey=CDS;gene=lcrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212971.1;locus_tag=YPIP275_RS22740;product=SctV family type III secretion system export apparatus subunit LcrD;protein_id=WP_002212971.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 23955 24395 . + . ID=gene-YPIP275_RS22745;Name=lcrR;gbkey=Gene;gene=lcrR;gene_biotype=protein_coding;locus_tag=YPIP275_RS22745 NZ_AAOS02000037.1 Protein Homology CDS 23955 24395 . + 0 ID=cds-WP_002220918.1;Parent=gene-YPIP275_RS22745;Dbxref=GenBank:WP_002220918.1;Name=WP_002220918.1;gbkey=CDS;gene=lcrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220918.1;locus_tag=YPIP275_RS22745;product=type III secretion system chaperone LcrR;protein_id=WP_002220918.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 24437 24724 . + . ID=gene-YPIP275_RS22750;Name=lcrG;gbkey=Gene;gene=lcrG;gene_biotype=protein_coding;locus_tag=YPIP275_RS22750;old_locus_tag=YPIP275_1577 NZ_AAOS02000037.1 Protein Homology CDS 24437 24724 . + 0 ID=cds-WP_002212973.1;Parent=gene-YPIP275_RS22750;Dbxref=GenBank:WP_002212973.1;Name=WP_002212973.1;gbkey=CDS;gene=lcrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212973.1;locus_tag=YPIP275_RS22750;product=type III secretion system chaperone LcrG;protein_id=WP_002212973.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 24726 25706 . + . ID=gene-YPIP275_RS22755;Name=lcrV;gbkey=Gene;gene=lcrV;gene_biotype=protein_coding;locus_tag=YPIP275_RS22755;old_locus_tag=YPIP275_1578 NZ_AAOS02000037.1 Protein Homology CDS 24726 25706 . + 0 ID=cds-WP_002212981.1;Parent=gene-YPIP275_RS22755;Dbxref=GenBank:WP_002212981.1;Name=WP_002212981.1;gbkey=CDS;gene=lcrV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212981.1;locus_tag=YPIP275_RS22755;product=type III secretion system needle tip protein LcrV;protein_id=WP_002212981.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 25719 26225 . + . ID=gene-YPIP275_RS22760;Name=lcrH;gbkey=Gene;gene=lcrH;gene_biotype=protein_coding;gene_synonym=sycD;locus_tag=YPIP275_RS22760 NZ_AAOS02000037.1 Protein Homology CDS 25719 26225 . + 0 ID=cds-WP_002222758.1;Parent=gene-YPIP275_RS22760;Dbxref=GenBank:WP_002222758.1;Name=WP_002222758.1;gbkey=CDS;gene=lcrH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011117633.1;locus_tag=YPIP275_RS22760;product=type III secretion system chaperone SycD/LcrH;protein_id=WP_002222758.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 26203 27408 . + . ID=gene-YPIP275_RS22765;Name=yopB;gbkey=Gene;gene=yopB;gene_biotype=protein_coding;gene_synonym=sctE;locus_tag=YPIP275_RS22765;old_locus_tag=YPIP275_1580 NZ_AAOS02000037.1 Protein Homology CDS 26203 27408 . + 0 ID=cds-WP_002212985.1;Parent=gene-YPIP275_RS22765;Dbxref=GenBank:WP_002212985.1;Name=WP_002212985.1;gbkey=CDS;gene=yopB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011117632.1;locus_tag=YPIP275_RS22765;product=type III secretion system translocon subunit YopB;protein_id=WP_002212985.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 27427 28347 . + . ID=gene-YPIP275_RS22770;Name=yopD;gbkey=Gene;gene=yopD;gene_biotype=protein_coding;gene_synonym=sctB;locus_tag=YPIP275_RS22770;old_locus_tag=YPIP275_1581 NZ_AAOS02000037.1 Protein Homology CDS 27427 28347 . + 0 ID=cds-WP_002212987.1;Parent=gene-YPIP275_RS22770;Dbxref=GenBank:WP_002212987.1;Name=WP_002212987.1;gbkey=CDS;gene=yopD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011117631.1;locus_tag=YPIP275_RS22770;product=type III secretion system translocon subunit YopD;protein_id=WP_002212987.1;transl_table=11 NZ_AAOS02000037.1 RefSeq pseudogene 28815 29452 . - . ID=gene-YPIP275_RS28980;Name=YPIP275_RS28980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28980;pseudo=true NZ_AAOS02000037.1 Protein Homology CDS 28815 29452 . - 0 ID=cds-YPIP275_RS28980;Parent=gene-YPIP275_RS28980;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548890.1;locus_tag=YPIP275_RS28980;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 29473 29682 . + . ID=gene-YPIP275_RS22780;Name=YPIP275_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22780;old_locus_tag=YPIP275_1584 NZ_AAOS02000037.1 GeneMarkS-2+ CDS 29473 29682 . + 0 ID=cds-WP_002229781.1;Parent=gene-YPIP275_RS22780;Dbxref=GenBank:WP_002229781.1;Name=WP_002229781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS22780;product=hypothetical protein;protein_id=WP_002229781.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 30076 31305 . + . ID=gene-YPIP275_RS22785;Name=yopM;gbkey=Gene;gene=yopM;gene_biotype=protein_coding;locus_tag=YPIP275_RS22785;old_locus_tag=YPIP275_1585 NZ_AAOS02000037.1 Protein Homology CDS 30076 31305 . + 0 ID=cds-WP_002229779.1;Parent=gene-YPIP275_RS22785;Dbxref=GenBank:WP_002229779.1;Name=WP_002229779.1;gbkey=CDS;gene=yopM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229779.1;locus_tag=YPIP275_RS22785;product=type III secretion system effector YopM;protein_id=WP_002229779.1;transl_table=11 NZ_AAOS02000037.1 RefSeq pseudogene 31348 31665 . - . ID=gene-YPIP275_RS22790;Name=YPIP275_RS22790;end_range=31665,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS22790;partial=true;pseudo=true NZ_AAOS02000037.1 Protein Homology CDS 31348 31665 . - 0 ID=cds-YPIP275_RS22790;Parent=gene-YPIP275_RS22790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=31665,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005054087.1;locus_tag=YPIP275_RS22790;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 31547 31792 . - . ID=gene-YPIP275_RS28015;Name=YPIP275_RS28015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28015 NZ_AAOS02000037.1 Protein Homology CDS 31547 31792 . - 0 ID=cds-WP_116442925.1;Parent=gene-YPIP275_RS28015;Dbxref=GenBank:WP_116442925.1;Name=WP_116442925.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013068.6;locus_tag=YPIP275_RS28015;product=transposase;protein_id=WP_116442925.1;transl_table=11 NZ_AAOS02000037.1 RefSeq pseudogene 31795 32013 . + . ID=gene-YPIP275_RS28020;Name=YPIP275_RS28020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28020;old_locus_tag=YPIP275_1588;partial=true;pseudo=true;start_range=.,31795 NZ_AAOS02000037.1 Protein Homology CDS 31795 32013 . + 0 ID=cds-YPIP275_RS28020;Parent=gene-YPIP275_RS28020;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558335.1;locus_tag=YPIP275_RS28020;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,31795;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 32541 32960 . - . ID=gene-YPIP275_RS22795;Name=YPIP275_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22795 NZ_AAOS02000037.1 Protein Homology CDS 32541 32960 . - 0 ID=cds-WP_002222515.1;Parent=gene-YPIP275_RS22795;Dbxref=GenBank:WP_002222515.1;Name=WP_002222515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191376.1;locus_tag=YPIP275_RS22795;product=hypothetical protein;protein_id=WP_002222515.1;transl_table=11 NZ_AAOS02000037.1 RefSeq pseudogene 32978 33259 . - . ID=gene-YPIP275_RS28025;Name=YPIP275_RS28025;end_range=33259,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28025;partial=true;pseudo=true NZ_AAOS02000037.1 Protein Homology CDS 32978 33259 . - 0 ID=cds-YPIP275_RS28025;Parent=gene-YPIP275_RS28025;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=33259,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558335.1;locus_tag=YPIP275_RS28025;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 33665 34063 . - . ID=gene-YPIP275_RS22805;Name=sycT;gbkey=Gene;gene=sycT;gene_biotype=protein_coding;locus_tag=YPIP275_RS22805;old_locus_tag=YPIP275_1592 NZ_AAOS02000037.1 Protein Homology CDS 33665 34063 . - 0 ID=cds-WP_002213004.1;Parent=gene-YPIP275_RS22805;Dbxref=GenBank:WP_002213004.1;Name=WP_002213004.1;gbkey=CDS;gene=sycT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213004.1;locus_tag=YPIP275_RS22805;product=type III secretion system chaperone SycT;protein_id=WP_002213004.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 34063 35031 . - . ID=gene-YPIP275_RS22810;Name=yopT;gbkey=Gene;gene=yopT;gene_biotype=protein_coding;locus_tag=YPIP275_RS22810;old_locus_tag=YPIP275_1593 NZ_AAOS02000037.1 Protein Homology CDS 34063 35031 . - 0 ID=cds-WP_002213006.1;Parent=gene-YPIP275_RS22810;Dbxref=GenBank:WP_002213006.1;Name=WP_002213006.1;gbkey=CDS;gene=yopT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213006.1;locus_tag=YPIP275_RS22810;product=T3SS effector cysteine protease YopT;protein_id=WP_002213006.1;transl_table=11 NZ_AAOS02000037.1 RefSeq gene 35531 36079 . + . ID=gene-YPIP275_RS22815;Name=yopK;gbkey=Gene;gene=yopK;gene_biotype=protein_coding;gene_synonym=yopQ;locus_tag=YPIP275_RS22815;old_locus_tag=YPIP275_1594 NZ_AAOS02000037.1 Protein Homology CDS 35531 36079 . + 0 ID=cds-WP_002213007.1;Parent=gene-YPIP275_RS22815;Dbxref=GenBank:WP_002213007.1;Name=WP_002213007.1;gbkey=CDS;gene=yopK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213007.1;locus_tag=YPIP275_RS22815;product=type III secretion system effector YopK;protein_id=WP_002213007.1;transl_table=11 NZ_AAOS02000037.1 RefSeq pseudogene 36238 36521 . + . ID=gene-YPIP275_RS28030;Name=YPIP275_RS28030;end_range=36521,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28030;partial=true;pseudo=true;start_range=.,36238 NZ_AAOS02000037.1 Protein Homology CDS 36238 36521 . + 0 ID=cds-YPIP275_RS28030;Parent=gene-YPIP275_RS28030;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=36521,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611491.1;locus_tag=YPIP275_RS28030;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,36238;transl_table=11 NZ_AAOS02000037.1 RefSeq pseudogene 36561 37299 . + . ID=gene-YPIP275_RS22830;Name=traT;gbkey=Gene;gene=traT;gene_biotype=pseudogene;locus_tag=YPIP275_RS22830;old_locus_tag=YPIP275_1596;pseudo=true NZ_AAOS02000037.1 Protein Homology CDS 36561 37299 . + 0 ID=cds-YPIP275_RS22830;Parent=gene-YPIP275_RS22830;Note=frameshifted;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001485398.1;locus_tag=YPIP275_RS22830;product=conjugal transfer complement resistance protein TraT;pseudo=true;transl_table=11 NZ_AAOS02000037.1 RefSeq pseudogene 37406 38129 . + . ID=gene-YPIP275_RS28985;Name=YPIP275_RS28985;end_range=38129,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28985;partial=true;pseudo=true NZ_AAOS02000037.1 Protein Homology CDS 37406 38129 . + 0 ID=cds-YPIP275_RS28985;Parent=gene-YPIP275_RS28985;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=38129,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558235.1;locus_tag=YPIP275_RS28985;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_AAOS02000036.1 1 41371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000036.1 RefSeq region 1 41371 . + . ID=NZ_AAOS02000036.1:1..41371;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000036.1 RefSeq pseudogene 1 570 . - . ID=gene-YPIP275_RS22450;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=YPIP275_RS22450;old_locus_tag=YPIP275_4661;partial=true;pseudo=true;start_range=.,1 NZ_AAOS02000036.1 Protein Homology CDS 1 570 . - 0 ID=cds-YPIP275_RS22450;Parent=gene-YPIP275_RS22450;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS22450;partial=true;product=IS21-like element IS100 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 787 1431 . + . ID=gene-YPIP275_RS22455;Name=YPIP275_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22455;old_locus_tag=YPIP275_4663 NZ_AAOS02000036.1 Protein Homology CDS 787 1431 . + 0 ID=cds-WP_002212747.1;Parent=gene-YPIP275_RS22455;Dbxref=GenBank:WP_002212747.1;Name=WP_002212747.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212747.1;locus_tag=YPIP275_RS22455;product=fimbrial biogenesis chaperone;protein_id=WP_002212747.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 1507 4071 . + . ID=gene-YPIP275_RS22460;Name=YPIP275_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22460;old_locus_tag=YPIP275_4664 NZ_AAOS02000036.1 Protein Homology CDS 1507 4071 . + 0 ID=cds-WP_002212750.1;Parent=gene-YPIP275_RS22460;Dbxref=GenBank:WP_002212750.1;Name=WP_002212750.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220437.1;locus_tag=YPIP275_RS22460;product=fimbria/pilus outer membrane usher protein;protein_id=WP_002212750.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 4159 5436 . + . ID=gene-YPIP275_RS22465;Name=YPIP275_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22465;old_locus_tag=YPIP275_4665 NZ_AAOS02000036.1 Protein Homology CDS 4159 5436 . + 0 ID=cds-WP_002221882.1;Parent=gene-YPIP275_RS22465;Dbxref=GenBank:WP_002221882.1;Name=WP_002221882.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221882.1;locus_tag=YPIP275_RS22465;product=fimbrial protein;protein_id=WP_002221882.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 5433 6173 . + . ID=gene-YPIP275_RS22470;Name=YPIP275_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22470;old_locus_tag=YPIP275_4666 NZ_AAOS02000036.1 Protein Homology CDS 5433 6173 . + 0 ID=cds-WP_002227954.1;Parent=gene-YPIP275_RS22470;Dbxref=GenBank:WP_002227954.1;Name=WP_002227954.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227954.1;locus_tag=YPIP275_RS22470;product=fimbrial biogenesis chaperone;protein_id=WP_002227954.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 6476 6551 . + . ID=gene-YPIP275_RS22475;Name=YPIP275_RS22475;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS22475;old_locus_tag=YPIP275_4667 NZ_AAOS02000036.1 tRNAscan-SE tRNA 6476 6551 . + . ID=rna-YPIP275_RS22475;Parent=gene-YPIP275_RS22475;anticodon=(pos:6509..6511);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS22475;product=tRNA-Asn NZ_AAOS02000036.1 tRNAscan-SE exon 6476 6551 . + . ID=exon-YPIP275_RS22475-1;Parent=rna-YPIP275_RS22475;anticodon=(pos:6509..6511);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS22475;product=tRNA-Asn NZ_AAOS02000036.1 RefSeq gene 6713 7975 . + . ID=gene-YPIP275_RS22480;Name=YPIP275_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22480;old_locus_tag=YPIP275_4668 NZ_AAOS02000036.1 Protein Homology CDS 6713 7975 . + 0 ID=cds-WP_002212753.1;Parent=gene-YPIP275_RS22480;Dbxref=GenBank:WP_002212753.1;Name=WP_002212753.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227760.1;locus_tag=YPIP275_RS22480;product=tyrosine-type recombinase/integrase;protein_id=WP_002212753.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 8169 9473 . - . ID=gene-YPIP275_RS22485;Name=ybtS;gbkey=Gene;gene=ybtS;gene_biotype=protein_coding;locus_tag=YPIP275_RS22485;old_locus_tag=YPIP275_4669 NZ_AAOS02000036.1 Protein Homology CDS 8169 9473 . - 0 ID=cds-WP_000703040.1;Parent=gene-YPIP275_RS22485;Dbxref=GenBank:WP_000703040.1;Name=WP_000703040.1;gbkey=CDS;gene=ybtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227761.1;locus_tag=YPIP275_RS22485;product=yersiniabactin biosynthesis salicylate synthase Irp9/YbtS;protein_id=WP_000703040.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 9501 10781 . - . ID=gene-YPIP275_RS22490;Name=ybtX;gbkey=Gene;gene=ybtX;gene_biotype=protein_coding;locus_tag=YPIP275_RS22490;old_locus_tag=YPIP275_4670 NZ_AAOS02000036.1 Protein Homology CDS 9501 10781 . - 0 ID=cds-WP_001286280.1;Parent=gene-YPIP275_RS22490;Dbxref=GenBank:WP_001286280.1;Name=WP_001286280.1;gbkey=CDS;gene=ybtX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227762.1;locus_tag=YPIP275_RS22490;product=yersiniabactin-associated zinc MFS transporter YbtX;protein_id=WP_001286280.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 10774 12576 . - . ID=gene-YPIP275_RS22495;Name=ybtQ;gbkey=Gene;gene=ybtQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS22495;old_locus_tag=YPIP275_4671 NZ_AAOS02000036.1 Protein Homology CDS 10774 12576 . - 0 ID=cds-WP_002212761.1;Parent=gene-YPIP275_RS22495;Dbxref=GenBank:WP_002212761.1;Name=WP_002212761.1;gbkey=CDS;gene=ybtQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227763.1;locus_tag=YPIP275_RS22495;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtQ;protein_id=WP_002212761.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 12563 14275 . - . ID=gene-YPIP275_RS22500;Name=ybtP;gbkey=Gene;gene=ybtP;gene_biotype=protein_coding;locus_tag=YPIP275_RS22500;old_locus_tag=YPIP275_4672 NZ_AAOS02000036.1 Protein Homology CDS 12563 14275 . - 0 ID=cds-WP_002214412.1;Parent=gene-YPIP275_RS22500;Dbxref=GenBank:WP_002214412.1;Name=WP_002214412.1;gbkey=CDS;gene=ybtP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227764.1;locus_tag=YPIP275_RS22500;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtP;protein_id=WP_002214412.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 14532 15491 . + . ID=gene-YPIP275_RS22505;Name=ybtA;gbkey=Gene;gene=ybtA;gene_biotype=protein_coding;locus_tag=YPIP275_RS22505;old_locus_tag=YPIP275_4673 NZ_AAOS02000036.1 Protein Homology CDS 14532 15491 . + 0 ID=cds-WP_000140406.1;Parent=gene-YPIP275_RS22505;Dbxref=GenBank:WP_000140406.1;Name=WP_000140406.1;gbkey=CDS;gene=ybtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227765.1;locus_tag=YPIP275_RS22505;product=yersiniabactin transcriptional regulator YbtA;protein_id=WP_000140406.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 15682 21789 . + . ID=gene-YPIP275_RS22510;Name=irp2;gbkey=Gene;gene=irp2;gene_biotype=protein_coding;locus_tag=YPIP275_RS22510;old_locus_tag=YPIP275_4674 NZ_AAOS02000036.1 Protein Homology CDS 15682 21789 . + 0 ID=cds-WP_002212775.1;Parent=gene-YPIP275_RS22510;Dbxref=GenBank:WP_002212775.1;Name=WP_002212775.1;Ontology_term=GO:1904091;gbkey=CDS;gene=irp2;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227766.1;locus_tag=YPIP275_RS22510;product=yersiniabactin non-ribosomal peptide synthetase HMWP2;protein_id=WP_002212775.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 21877 31368 . + . ID=gene-YPIP275_RS22515;Name=irp1;gbkey=Gene;gene=irp1;gene_biotype=protein_coding;locus_tag=YPIP275_RS22515;old_locus_tag=YPIP275_4675 NZ_AAOS02000036.1 Protein Homology CDS 21877 31368 . + 0 ID=cds-WP_002212777.1;Parent=gene-YPIP275_RS22515;Dbxref=GenBank:WP_002212777.1;Name=WP_002212777.1;gbkey=CDS;gene=irp1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227767.1;locus_tag=YPIP275_RS22515;product=yersiniabactin polyketide synthase HMWP1;protein_id=WP_002212777.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 31365 32465 . + . ID=gene-YPIP275_RS22520;Name=ybtU;gbkey=Gene;gene=ybtU;gene_biotype=protein_coding;locus_tag=YPIP275_RS22520;old_locus_tag=YPIP275_4676 NZ_AAOS02000036.1 Protein Homology CDS 31365 32465 . + 0 ID=cds-WP_000982866.1;Parent=gene-YPIP275_RS22520;Dbxref=GenBank:WP_000982866.1;Name=WP_000982866.1;gbkey=CDS;gene=ybtU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227768.1;locus_tag=YPIP275_RS22520;product=yersiniabactin biosynthesis oxidoreductase YbtU;protein_id=WP_000982866.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 32462 33265 . + . ID=gene-YPIP275_RS22525;Name=ybtT;gbkey=Gene;gene=ybtT;gene_biotype=protein_coding;locus_tag=YPIP275_RS22525;old_locus_tag=YPIP275_4677 NZ_AAOS02000036.1 Protein Homology CDS 32462 33265 . + 0 ID=cds-WP_002212799.1;Parent=gene-YPIP275_RS22525;Dbxref=GenBank:WP_002212799.1;Name=WP_002212799.1;gbkey=CDS;gene=ybtT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212799.1;locus_tag=YPIP275_RS22525;product=yersiniabactin biosynthesis thioesterase YbtT;protein_id=WP_002212799.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 33269 34846 . + . ID=gene-YPIP275_RS22530;Name=ybtE;gbkey=Gene;gene=ybtE;gene_biotype=protein_coding;locus_tag=YPIP275_RS22530;old_locus_tag=YPIP275_4678 NZ_AAOS02000036.1 Protein Homology CDS 33269 34846 . + 0 ID=cds-WP_001088826.1;Parent=gene-YPIP275_RS22530;Dbxref=GenBank:WP_001088826.1;Name=WP_001088826.1;gbkey=CDS;gene=ybtE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227770.1;locus_tag=YPIP275_RS22530;product=yersiniabactin biosynthesis salycil-AMP ligase YbtE;protein_id=WP_001088826.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 34977 36998 . + . ID=gene-YPIP275_RS22535;Name=fyuA;gbkey=Gene;gene=fyuA;gene_biotype=protein_coding;locus_tag=YPIP275_RS22535;old_locus_tag=YPIP275_4679 NZ_AAOS02000036.1 Protein Homology CDS 34977 36998 . + 0 ID=cds-WP_002212885.1;Parent=gene-YPIP275_RS22535;Dbxref=GenBank:WP_002212885.1;Name=WP_002212885.1;gbkey=CDS;gene=fyuA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227771.1;locus_tag=YPIP275_RS22535;product=siderophore yersiniabactin receptor FyuA;protein_id=WP_002212885.1;transl_table=11 NZ_AAOS02000036.1 RefSeq pseudogene 37871 38798 . + . ID=gene-YPIP275_RS28970;Name=YPIP275_RS28970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28970;pseudo=true NZ_AAOS02000036.1 Protein Homology CDS 37871 38798 . + 0 ID=cds-YPIP275_RS28970;Parent=gene-YPIP275_RS28970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227772.1;locus_tag=YPIP275_RS28970;product=hypothetical protein;pseudo=true;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 38938 39123 . + . ID=gene-YPIP275_RS22550;Name=YPIP275_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22550 NZ_AAOS02000036.1 Protein Homology CDS 38938 39123 . + 0 ID=cds-WP_000205185.1;Parent=gene-YPIP275_RS22550;Dbxref=GenBank:WP_000205185.1;Name=WP_000205185.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200568.1;locus_tag=YPIP275_RS22550;product=AlpA family transcriptional regulator;protein_id=WP_000205185.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 39312 39893 . + . ID=gene-YPIP275_RS22560;Name=YPIP275_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22560;old_locus_tag=YPIP275_4681 NZ_AAOS02000036.1 Protein Homology CDS 39312 39893 . + 0 ID=cds-WP_000937857.1;Parent=gene-YPIP275_RS22560;Dbxref=GenBank:WP_000937857.1;Name=WP_000937857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227773.1;locus_tag=YPIP275_RS22560;product=DUF2857 domain-containing protein;protein_id=WP_000937857.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 39883 40092 . + . ID=gene-YPIP275_RS27995;Name=YPIP275_RS27995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27995 NZ_AAOS02000036.1 Protein Homology CDS 39883 40092 . + 0 ID=cds-WP_001112403.1;Parent=gene-YPIP275_RS27995;Dbxref=GenBank:WP_001112403.1;Name=WP_001112403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112402.1;locus_tag=YPIP275_RS27995;product=TraR/DksA family transcriptional regulator;protein_id=WP_001112403.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 40314 40448 . + . ID=gene-YPIP275_RS22570;Name=YPIP275_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22570;old_locus_tag=YPIP275_4682 NZ_AAOS02000036.1 Protein Homology CDS 40314 40448 . + 0 ID=cds-WP_223871912.1;Parent=gene-YPIP275_RS22570;Dbxref=GenBank:WP_223871912.1;Name=WP_223871912.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017162.7;locus_tag=YPIP275_RS22570;product=Hha/YmoA family nucleoid-associated regulatory protein;protein_id=WP_223871912.1;transl_table=11 NZ_AAOS02000036.1 RefSeq gene 40492 41274 . - . ID=gene-YPIP275_RS22575;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS22575;old_locus_tag=YPIP275_4683 NZ_AAOS02000036.1 Protein Homology CDS 40492 41274 . - 0 ID=cds-WP_001317493.1-7;Parent=gene-YPIP275_RS22575;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS22575;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 ##sequence-region NZ_AAOS02000035.1 1 42133 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000035.1 RefSeq region 1 42133 . + . ID=NZ_AAOS02000035.1:1..42133;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000035.1 RefSeq gene 83 2989 . + . ID=gene-YPIP275_RS22215;Name=YPIP275_RS22215;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPIP275_RS22215;old_locus_tag=YPIP275_2058 NZ_AAOS02000035.1 cmsearch rRNA 83 2989 . + . ID=rna-YPIP275_RS22215;Parent=gene-YPIP275_RS22215;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS22215;product=23S ribosomal RNA NZ_AAOS02000035.1 cmsearch exon 83 2989 . + . ID=exon-YPIP275_RS22215-1;Parent=rna-YPIP275_RS22215;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS22215;product=23S ribosomal RNA NZ_AAOS02000035.1 RefSeq gene 3099 3214 . + . ID=gene-YPIP275_RS22220;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=YPIP275_RS22220;old_locus_tag=YPIP275_2059 NZ_AAOS02000035.1 cmsearch rRNA 3099 3214 . + . ID=rna-YPIP275_RS22220;Parent=gene-YPIP275_RS22220;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS22220;product=5S ribosomal RNA NZ_AAOS02000035.1 cmsearch exon 3099 3214 . + . ID=exon-YPIP275_RS22220-1;Parent=rna-YPIP275_RS22220;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS22220;product=5S ribosomal RNA NZ_AAOS02000035.1 RefSeq gene 3678 4715 . + . ID=gene-YPIP275_RS22225;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=YPIP275_RS22225;old_locus_tag=YPIP275_2060 NZ_AAOS02000035.1 Protein Homology CDS 3678 4715 . + 0 ID=cds-WP_002212288.1;Parent=gene-YPIP275_RS22225;Dbxref=GenBank:WP_002212288.1;Name=WP_002212288.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716469.1;locus_tag=YPIP275_RS22225;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_002212288.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 4712 5671 . + . ID=gene-YPIP275_RS22230;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=YPIP275_RS22230;old_locus_tag=YPIP275_2061 NZ_AAOS02000035.1 Protein Homology CDS 4712 5671 . + 0 ID=cds-WP_002212289.1;Parent=gene-YPIP275_RS22230;Dbxref=GenBank:WP_002212289.1;Name=WP_002212289.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080256.1;locus_tag=YPIP275_RS22230;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_002212289.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 5706 6656 . - . ID=gene-YPIP275_RS22235;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS22235;old_locus_tag=YPIP275_2062 NZ_AAOS02000035.1 Protein Homology CDS 5706 6656 . - 0 ID=cds-WP_002212290.1;Parent=gene-YPIP275_RS22235;Dbxref=GenBank:WP_002212290.1;Name=WP_002212290.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004738.1;locus_tag=YPIP275_RS22235;product=type I pantothenate kinase;protein_id=WP_002212290.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 6867 7325 . - . ID=gene-YPIP275_RS22240;Name=YPIP275_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22240;old_locus_tag=YPIP275_2063 NZ_AAOS02000035.1 Protein Homology CDS 6867 7325 . - 0 ID=cds-WP_002355327.1;Parent=gene-YPIP275_RS22240;Dbxref=GenBank:WP_002355327.1;Name=WP_002355327.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002355327.1;locus_tag=YPIP275_RS22240;product=GNAT family N-acetyltransferase;protein_id=WP_002355327.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 7508 8530 . + . ID=gene-YPIP275_RS22245;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS22245;old_locus_tag=YPIP275_2065 NZ_AAOS02000035.1 Protein Homology CDS 7508 8530 . + 0 ID=cds-WP_000255944.1-4;Parent=gene-YPIP275_RS22245;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS22245;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 8527 9309 . + . ID=gene-YPIP275_RS22250;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS22250;old_locus_tag=YPIP275_2066 NZ_AAOS02000035.1 Protein Homology CDS 8527 9309 . + 0 ID=cds-WP_001317493.1-8;Parent=gene-YPIP275_RS22250;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS22250;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000035.1 RefSeq pseudogene 9377 9739 . + . ID=gene-YPIP275_RS22255;Name=YPIP275_RS22255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS22255;old_locus_tag=YPIP275_2067;partial=true;pseudo=true;start_range=.,9377 NZ_AAOS02000035.1 Protein Homology CDS 9377 9739 . + 0 ID=cds-YPIP275_RS22255;Parent=gene-YPIP275_RS22255;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303426.1;locus_tag=YPIP275_RS22255;partial=true;product=helicase HerA-like domain-containing protein;pseudo=true;start_range=.,9377;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 9982 10557 . + . ID=gene-YPIP275_RS22260;Name=YPIP275_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22260;old_locus_tag=YPIP275_2068 NZ_AAOS02000035.1 Protein Homology CDS 9982 10557 . + 0 ID=cds-WP_002212294.1;Parent=gene-YPIP275_RS22260;Dbxref=GenBank:WP_002212294.1;Name=WP_002212294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081524.1;locus_tag=YPIP275_RS22260;product=aminodeoxychorismate synthase component II;protein_id=WP_002212294.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 10690 11907 . + . ID=gene-YPIP275_RS22265;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=YPIP275_RS22265;old_locus_tag=YPIP275_2069 NZ_AAOS02000035.1 Protein Homology CDS 10690 11907 . + 0 ID=cds-WP_002212295.1;Parent=gene-YPIP275_RS22265;Dbxref=GenBank:WP_002212295.1;Name=WP_002212295.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016595175.1;locus_tag=YPIP275_RS22265;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_002212295.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 12133 14253 . - . ID=gene-YPIP275_RS22270;Name=YPIP275_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22270;old_locus_tag=YPIP275_2070 NZ_AAOS02000035.1 Protein Homology CDS 12133 14253 . - 0 ID=cds-WP_002212296.1;Parent=gene-YPIP275_RS22270;Dbxref=GenBank:WP_002212296.1;Name=WP_002212296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303428.1;locus_tag=YPIP275_RS22270;product=YccS/YhfK family putative transporter;protein_id=WP_002212296.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 14339 14971 . - . ID=gene-YPIP275_RS22275;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=YPIP275_RS22275;old_locus_tag=YPIP275_2071 NZ_AAOS02000035.1 Protein Homology CDS 14339 14971 . - 0 ID=cds-WP_002212297.1;Parent=gene-YPIP275_RS22275;Dbxref=GenBank:WP_002212297.1;Name=WP_002212297.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=YPIP275_RS22275;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_002212297.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 15307 15714 . + . ID=gene-YPIP275_RS22280;Name=YPIP275_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22280;old_locus_tag=YPIP275_2072 NZ_AAOS02000035.1 Protein Homology CDS 15307 15714 . + 0 ID=cds-WP_002212298.1;Parent=gene-YPIP275_RS22280;Dbxref=GenBank:WP_002212298.1;Name=WP_002212298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906133.1;locus_tag=YPIP275_RS22280;product=OsmC family protein;protein_id=WP_002212298.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 15786 16217 . + . ID=gene-YPIP275_RS22285;Name=YPIP275_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22285;old_locus_tag=YPIP275_2073 NZ_AAOS02000035.1 Protein Homology CDS 15786 16217 . + 0 ID=cds-WP_002228139.1;Parent=gene-YPIP275_RS22285;Dbxref=GenBank:WP_002228139.1;Name=WP_002228139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228139.1;locus_tag=YPIP275_RS22285;product=DUF1240 domain-containing protein;protein_id=WP_002228139.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 16395 17264 . - . ID=gene-YPIP275_RS22290;Name=YPIP275_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22290;old_locus_tag=YPIP275_2074 NZ_AAOS02000035.1 Protein Homology CDS 16395 17264 . - 0 ID=cds-WP_002212300.1;Parent=gene-YPIP275_RS22290;Dbxref=GenBank:WP_002212300.1;Name=WP_002212300.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212300.1;locus_tag=YPIP275_RS22290;product=phosphoribulokinase;protein_id=WP_002212300.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 17413 17649 . - . ID=gene-YPIP275_RS22295;Name=YPIP275_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22295;old_locus_tag=YPIP275_2075 NZ_AAOS02000035.1 Protein Homology CDS 17413 17649 . - 0 ID=cds-WP_002212301.1;Parent=gene-YPIP275_RS22295;Dbxref=GenBank:WP_002212301.1;Name=WP_002212301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212301.1;locus_tag=YPIP275_RS22295;product=YheU family protein;protein_id=WP_002212301.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 17646 18626 . - . ID=gene-YPIP275_RS22300;Name=YPIP275_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22300;old_locus_tag=YPIP275_2076 NZ_AAOS02000035.1 Protein Homology CDS 17646 18626 . - 0 ID=cds-WP_002212302.1;Parent=gene-YPIP275_RS22300;Dbxref=GenBank:WP_002212302.1;Name=WP_002212302.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014462221.1;locus_tag=YPIP275_RS22300;product=hydrolase;protein_id=WP_002212302.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 18728 19330 . + . ID=gene-YPIP275_RS22305;Name=YPIP275_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22305;old_locus_tag=YPIP275_2077 NZ_AAOS02000035.1 Protein Homology CDS 18728 19330 . + 0 ID=cds-WP_002212303.1;Parent=gene-YPIP275_RS22305;Dbxref=GenBank:WP_002212303.1;Name=WP_002212303.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391456.1;locus_tag=YPIP275_RS22305;product=LysE family translocator;protein_id=WP_002212303.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 19605 20594 . + . ID=gene-YPIP275_RS22310;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=YPIP275_RS22310;old_locus_tag=YPIP275_2079 NZ_AAOS02000035.1 Protein Homology CDS 19605 20594 . + 0 ID=cds-WP_160175363.1;Parent=gene-YPIP275_RS22310;Dbxref=GenBank:WP_160175363.1;Name=WP_160175363.1;Ontology_term=GO:0055085,GO:0015411,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303432.1;locus_tag=YPIP275_RS22310;product=taurine ABC transporter substrate-binding protein;protein_id=WP_160175363.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 20603 21370 . + . ID=gene-YPIP275_RS22315;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=YPIP275_RS22315;old_locus_tag=YPIP275_2080 NZ_AAOS02000035.1 Protein Homology CDS 20603 21370 . + 0 ID=cds-WP_002212307.1;Parent=gene-YPIP275_RS22315;Dbxref=GenBank:WP_002212307.1;Name=WP_002212307.1;Ontology_term=GO:0005524,GO:0015411,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type taurine transporter transporter activity|0015411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005186200.1;locus_tag=YPIP275_RS22315;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_002212307.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 21367 22221 . + . ID=gene-YPIP275_RS22320;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=YPIP275_RS22320;old_locus_tag=YPIP275_2081 NZ_AAOS02000035.1 Protein Homology CDS 21367 22221 . + 0 ID=cds-WP_002212309.1;Parent=gene-YPIP275_RS22320;Dbxref=GenBank:WP_002212309.1;Name=WP_002212309.1;Ontology_term=GO:0055085,GO:0015411,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212309.1;locus_tag=YPIP275_RS22320;product=taurine ABC transporter permease TauC;protein_id=WP_002212309.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 22218 23066 . + . ID=gene-YPIP275_RS22325;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=YPIP275_RS22325;old_locus_tag=YPIP275_2082 NZ_AAOS02000035.1 Protein Homology CDS 22218 23066 . + 0 ID=cds-WP_002212310.1;Parent=gene-YPIP275_RS22325;Dbxref=GenBank:WP_002212310.1;Name=WP_002212310.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081513.1;locus_tag=YPIP275_RS22325;product=taurine dioxygenase;protein_id=WP_002212310.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 23079 24059 . - . ID=gene-YPIP275_RS22330;Name=YPIP275_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22330;old_locus_tag=YPIP275_2083 NZ_AAOS02000035.1 Protein Homology CDS 23079 24059 . - 0 ID=cds-WP_002212311.1;Parent=gene-YPIP275_RS22330;Dbxref=GenBank:WP_002212311.1;Name=WP_002212311.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105872.1;locus_tag=YPIP275_RS22330;product=glycosyltransferase family 9 protein;protein_id=WP_002212311.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 24152 25141 . - . ID=gene-YPIP275_RS22335;Name=YPIP275_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22335;old_locus_tag=YPIP275_2084 NZ_AAOS02000035.1 Protein Homology CDS 24152 25141 . - 0 ID=cds-WP_002212312.1;Parent=gene-YPIP275_RS22335;Dbxref=GenBank:WP_002212312.1;Name=WP_002212312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105871.1;locus_tag=YPIP275_RS22335;product=glycosyltransferase;protein_id=WP_002212312.1;transl_table=11 NZ_AAOS02000035.1 RefSeq pseudogene 25276 27194 . - . ID=gene-YPIP275_RS22340;Name=YPIP275_RS22340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS22340;old_locus_tag=YPIP275_2085;pseudo=true NZ_AAOS02000035.1 Protein Homology CDS 25276 27194 . - 0 ID=cds-YPIP275_RS22340;Parent=gene-YPIP275_RS22340;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303435.1;locus_tag=YPIP275_RS22340;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 27445 27993 . + . ID=gene-YPIP275_RS22345;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=YPIP275_RS22345;old_locus_tag=YPIP275_2087 NZ_AAOS02000035.1 Protein Homology CDS 27445 27993 . + 0 ID=cds-WP_002215966.1;Parent=gene-YPIP275_RS22345;Dbxref=GenBank:WP_002215966.1;Name=WP_002215966.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215966.1;locus_tag=YPIP275_RS22345;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_002215966.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 27997 29805 . + . ID=gene-YPIP275_RS22350;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=YPIP275_RS22350;old_locus_tag=YPIP275_2088 NZ_AAOS02000035.1 Protein Homology CDS 27997 29805 . + 0 ID=cds-WP_002212314.1;Parent=gene-YPIP275_RS22350;Dbxref=GenBank:WP_002212314.1;Name=WP_002212314.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456128.1;locus_tag=YPIP275_RS22350;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_002212314.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 29821 30042 . + . ID=gene-YPIP275_RS22355;Name=YPIP275_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22355;old_locus_tag=YPIP275_2089 NZ_AAOS02000035.1 Protein Homology CDS 29821 30042 . + 0 ID=cds-WP_002212315.1;Parent=gene-YPIP275_RS22355;Dbxref=GenBank:WP_002212315.1;Name=WP_002212315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212315.1;locus_tag=YPIP275_RS22355;product=YheV family putative zinc ribbon protein;protein_id=WP_002212315.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 30137 30724 . + . ID=gene-YPIP275_RS22360;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=YPIP275_RS22360;old_locus_tag=YPIP275_2090 NZ_AAOS02000035.1 Protein Homology CDS 30137 30724 . + 0 ID=cds-WP_002212316.1;Parent=gene-YPIP275_RS22360;Dbxref=GenBank:WP_002212316.1;Name=WP_002212316.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212316.1;locus_tag=YPIP275_RS22360;product=peptidylprolyl isomerase;protein_id=WP_002212316.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 30945 31163 . - . ID=gene-YPIP275_RS22365;Name=YPIP275_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22365;old_locus_tag=YPIP275_2091 NZ_AAOS02000035.1 Protein Homology CDS 30945 31163 . - 0 ID=cds-WP_002212317.1;Parent=gene-YPIP275_RS22365;Dbxref=GenBank:WP_002212317.1;Name=WP_002212317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875114.1;locus_tag=YPIP275_RS22365;product=protein SlyX;protein_id=WP_002212317.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 31478 32278 . + . ID=gene-YPIP275_RS22370;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS22370;old_locus_tag=YPIP275_2092 NZ_AAOS02000035.1 Protein Homology CDS 31478 32278 . + 0 ID=cds-WP_002212318.1;Parent=gene-YPIP275_RS22370;Dbxref=GenBank:WP_002212318.1;Name=WP_002212318.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212318.1;locus_tag=YPIP275_RS22370;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_002212318.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 32532 33254 . + . ID=gene-YPIP275_RS22375;Name=YPIP275_RS22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22375;old_locus_tag=YPIP275_2093 NZ_AAOS02000035.1 Protein Homology CDS 32532 33254 . + 0 ID=cds-WP_002212319.1;Parent=gene-YPIP275_RS22375;Dbxref=GenBank:WP_002212319.1;Name=WP_002212319.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147233.1;locus_tag=YPIP275_RS22375;product=helix-turn-helix transcriptional regulator;protein_id=WP_002212319.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 33254 33649 . + . ID=gene-YPIP275_RS22380;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=YPIP275_RS22380;old_locus_tag=YPIP275_2094 NZ_AAOS02000035.1 Protein Homology CDS 33254 33649 . + 0 ID=cds-WP_002212320.1;Parent=gene-YPIP275_RS22380;Dbxref=GenBank:WP_002212320.1;Name=WP_002212320.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212320.1;locus_tag=YPIP275_RS22380;product=sulfurtransferase complex subunit TusD;protein_id=WP_002212320.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 33649 34014 . + . ID=gene-YPIP275_RS22385;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=YPIP275_RS22385;old_locus_tag=YPIP275_2095 NZ_AAOS02000035.1 Protein Homology CDS 33649 34014 . + 0 ID=cds-WP_002212321.1;Parent=gene-YPIP275_RS22385;Dbxref=GenBank:WP_002212321.1;Name=WP_002212321.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212321.1;locus_tag=YPIP275_RS22385;product=sulfurtransferase complex subunit TusC;protein_id=WP_002212321.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 34034 34321 . + . ID=gene-YPIP275_RS22390;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=YPIP275_RS22390;old_locus_tag=YPIP275_2096 NZ_AAOS02000035.1 Protein Homology CDS 34034 34321 . + 0 ID=cds-WP_002212322.1;Parent=gene-YPIP275_RS22390;Dbxref=GenBank:WP_002212322.1;Name=WP_002212322.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875108.1;locus_tag=YPIP275_RS22390;product=sulfurtransferase complex subunit TusB;protein_id=WP_002212322.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 34459 34833 . + . ID=gene-YPIP275_RS22395;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=YPIP275_RS22395;old_locus_tag=YPIP275_2097 NZ_AAOS02000035.1 Protein Homology CDS 34459 34833 . + 0 ID=cds-WP_002212323.1;Parent=gene-YPIP275_RS22395;Dbxref=GenBank:WP_002212323.1;Name=WP_002212323.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852912.1;locus_tag=YPIP275_RS22395;product=30S ribosomal protein S12;protein_id=WP_002212323.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 34930 35400 . + . ID=gene-YPIP275_RS22400;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=YPIP275_RS22400;old_locus_tag=YPIP275_2098 NZ_AAOS02000035.1 Protein Homology CDS 34930 35400 . + 0 ID=cds-WP_002212324.1;Parent=gene-YPIP275_RS22400;Dbxref=GenBank:WP_002212324.1;Name=WP_002212324.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=YPIP275_RS22400;product=30S ribosomal protein S7;protein_id=WP_002212324.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 35494 37602 . + . ID=gene-YPIP275_RS22405;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=YPIP275_RS22405;old_locus_tag=YPIP275_2100 NZ_AAOS02000035.1 Protein Homology CDS 35494 37602 . + 0 ID=cds-WP_002212325.1;Parent=gene-YPIP275_RS22405;Dbxref=GenBank:WP_002212325.1;Name=WP_002212325.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=YPIP275_RS22405;product=elongation factor G;protein_id=WP_002212325.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 37675 38859 . + . ID=gene-YPIP275_RS22410;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=YPIP275_RS22410;old_locus_tag=YPIP275_2101 NZ_AAOS02000035.1 Protein Homology CDS 37675 38859 . + 0 ID=cds-WP_002212326.1;Parent=gene-YPIP275_RS22410;Dbxref=GenBank:WP_002212326.1;Name=WP_002212326.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147227.1;locus_tag=YPIP275_RS22410;product=elongation factor Tu;protein_id=WP_002212326.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 39062 39520 . + . ID=gene-YPIP275_RS22415;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS22415;old_locus_tag=YPIP275_2102 NZ_AAOS02000035.1 Protein Homology CDS 39062 39520 . + 0 ID=cds-WP_002213775.1-9;Parent=gene-YPIP275_RS22415;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS22415;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 39708 39902 . + . ID=gene-YPIP275_RS22420;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=YPIP275_RS22420 NZ_AAOS02000035.1 Protein Homology CDS 39708 39902 . + 0 ID=cds-WP_002228136.1;Parent=gene-YPIP275_RS22420;Dbxref=GenBank:WP_002228136.1;Name=WP_002228136.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702312.1;locus_tag=YPIP275_RS22420;product=bacterioferritin-associated ferredoxin;protein_id=WP_002228136.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 39981 40454 . + . ID=gene-YPIP275_RS22425;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=YPIP275_RS22425;old_locus_tag=YPIP275_2103 NZ_AAOS02000035.1 Protein Homology CDS 39981 40454 . + 0 ID=cds-WP_002212327.1;Parent=gene-YPIP275_RS22425;Dbxref=GenBank:WP_002212327.1;Name=WP_002212327.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005174628.1;locus_tag=YPIP275_RS22425;product=bacterioferritin;protein_id=WP_002212327.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 40868 41179 . + . ID=gene-YPIP275_RS22430;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS22430;old_locus_tag=YPIP275_2104 NZ_AAOS02000035.1 Protein Homology CDS 40868 41179 . + 0 ID=cds-WP_001181005.1;Parent=gene-YPIP275_RS22430;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=YPIP275_RS22430;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 41212 41841 . + . ID=gene-YPIP275_RS22435;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=YPIP275_RS22435;old_locus_tag=YPIP275_2105 NZ_AAOS02000035.1 Protein Homology CDS 41212 41841 . + 0 ID=cds-WP_002218932.1;Parent=gene-YPIP275_RS22435;Dbxref=GenBank:WP_002218932.1;Name=WP_002218932.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=YPIP275_RS22435;product=50S ribosomal protein L3;protein_id=WP_002218932.1;transl_table=11 NZ_AAOS02000035.1 RefSeq gene 41858 42133 . + . ID=gene-YPIP275_RS22440;Name=YPIP275_RS22440;end_range=42133,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22440;old_locus_tag=YPIP275_2106;partial=true NZ_AAOS02000035.1 Protein Homology CDS 41858 42133 . + 0 ID=cds-WP_043940365.1;Parent=gene-YPIP275_RS22440;Dbxref=GenBank:WP_043940365.1;Name=WP_043940365.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;end_range=42133,.;gbkey=CDS;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=YPIP275_RS22440;partial=true;product=50S ribosomal protein L4;protein_id=WP_043940365.1;transl_table=11 ##sequence-region NZ_AAOS02000034.1 1 45017 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000034.1 RefSeq region 1 45017 . + . ID=NZ_AAOS02000034.1:1..45017;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000034.1 RefSeq gene 1 594 . + . ID=gene-YPIP275_RS22000;Name=YPIP275_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22000;old_locus_tag=YPIP275_0734;partial=true;start_range=.,1 NZ_AAOS02000034.1 Protein Homology CDS 1 594 . + 0 ID=cds-WP_002212249.1;Parent=gene-YPIP275_RS22000;Dbxref=GenBank:WP_002212249.1;Name=WP_002212249.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215905.1;locus_tag=YPIP275_RS22000;partial=true;product=FadR/GntR family transcriptional regulator;protein_id=WP_002212249.1;start_range=.,1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 674 2098 . + . ID=gene-YPIP275_RS22005;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=YPIP275_RS22005;old_locus_tag=YPIP275_0736 NZ_AAOS02000034.1 Protein Homology CDS 674 2098 . + 0 ID=cds-WP_002212250.1;Parent=gene-YPIP275_RS22005;Dbxref=GenBank:WP_002212250.1;Name=WP_002212250.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011991004.1;locus_tag=YPIP275_RS22005;product=multidrug transporter subunit MdtD;protein_id=WP_002212250.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 2095 2265 . - . ID=gene-YPIP275_RS22010;Name=YPIP275_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22010;old_locus_tag=YPIP275_0735 NZ_AAOS02000034.1 Protein Homology CDS 2095 2265 . - 0 ID=cds-WP_002215906.1;Parent=gene-YPIP275_RS22010;Dbxref=GenBank:WP_002215906.1;Name=WP_002215906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215906.1;locus_tag=YPIP275_RS22010;product=hypothetical protein;protein_id=WP_002215906.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 2318 3244 . - . ID=gene-YPIP275_RS22015;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=YPIP275_RS22015;old_locus_tag=YPIP275_0737 NZ_AAOS02000034.1 Protein Homology CDS 2318 3244 . - 0 ID=cds-WP_002212251.1;Parent=gene-YPIP275_RS22015;Dbxref=GenBank:WP_002212251.1;Name=WP_002212251.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304785.1;locus_tag=YPIP275_RS22015;product=ribokinase;protein_id=WP_002212251.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 3295 3714 . - . ID=gene-YPIP275_RS22020;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=YPIP275_RS22020;old_locus_tag=YPIP275_0738 NZ_AAOS02000034.1 Protein Homology CDS 3295 3714 . - 0 ID=cds-WP_002212252.1;Parent=gene-YPIP275_RS22020;Dbxref=GenBank:WP_002212252.1;Name=WP_002212252.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393068.1;locus_tag=YPIP275_RS22020;product=D-ribose pyranase;protein_id=WP_002212252.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 3919 5787 . - . ID=gene-YPIP275_RS22025;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=YPIP275_RS22025;old_locus_tag=YPIP275_0739 NZ_AAOS02000034.1 Protein Homology CDS 3919 5787 . - 0 ID=cds-WP_002212253.1;Parent=gene-YPIP275_RS22025;Dbxref=GenBank:WP_002212253.1;Name=WP_002212253.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462779.1;locus_tag=YPIP275_RS22025;product=low affinity potassium transporter Kup;protein_id=WP_002212253.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 6061 7614 . + . ID=gene-YPIP275_RS22030;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=YPIP275_RS22030;old_locus_tag=YPIP275_0740 NZ_AAOS02000034.1 Protein Homology CDS 6061 7614 . + 0 ID=cds-WP_002212254.1;Parent=gene-YPIP275_RS22030;Dbxref=GenBank:WP_002212254.1;Name=WP_002212254.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228149.1;locus_tag=YPIP275_RS22030;product=ATPase RavA;protein_id=WP_002212254.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 7618 9084 . + . ID=gene-YPIP275_RS22035;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS22035;old_locus_tag=YPIP275_0741 NZ_AAOS02000034.1 Protein Homology CDS 7618 9084 . + 0 ID=cds-WP_002212255.1;Parent=gene-YPIP275_RS22035;Dbxref=GenBank:WP_002212255.1;Name=WP_002212255.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875728.1;locus_tag=YPIP275_RS22035;product=ATPase RavA stimulator ViaA;protein_id=WP_002212255.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 9183 10175 . - . ID=gene-YPIP275_RS22040;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=YPIP275_RS22040;old_locus_tag=YPIP275_0742 NZ_AAOS02000034.1 Protein Homology CDS 9183 10175 . - 0 ID=cds-WP_002212256.1;Parent=gene-YPIP275_RS22040;Dbxref=GenBank:WP_002212256.1;Name=WP_002212256.1;Ontology_term=GO:0070981,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703868.1;locus_tag=YPIP275_RS22040;product=aspartate--ammonia ligase;protein_id=WP_002212256.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 10345 10806 . + . ID=gene-YPIP275_RS22045;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=YPIP275_RS22045;old_locus_tag=YPIP275_0743 NZ_AAOS02000034.1 Protein Homology CDS 10345 10806 . + 0 ID=cds-WP_002212257.1;Parent=gene-YPIP275_RS22045;Dbxref=GenBank:WP_002212257.1;Name=WP_002212257.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220765.1;locus_tag=YPIP275_RS22045;product=transcriptional regulator AsnC;protein_id=WP_002212257.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 10899 11339 . + . ID=gene-YPIP275_RS22050;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=YPIP275_RS22050;old_locus_tag=YPIP275_0744 NZ_AAOS02000034.1 Protein Homology CDS 10899 11339 . + 0 ID=cds-WP_002212258.1;Parent=gene-YPIP275_RS22050;Dbxref=GenBank:WP_002212258.1;Name=WP_002212258.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005271485.1;locus_tag=YPIP275_RS22050;product=FMN-binding protein MioC;protein_id=WP_002212258.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 11720 13609 . + . ID=gene-YPIP275_RS22055;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=YPIP275_RS22055;old_locus_tag=YPIP275_0745 NZ_AAOS02000034.1 Protein Homology CDS 11720 13609 . + 0 ID=cds-WP_002212259.1;Parent=gene-YPIP275_RS22055;Dbxref=GenBank:WP_002212259.1;Name=WP_002212259.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=YPIP275_RS22055;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_002212259.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 13755 14375 . + . ID=gene-YPIP275_RS22060;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=YPIP275_RS22060;old_locus_tag=YPIP275_0747 NZ_AAOS02000034.1 Protein Homology CDS 13755 14375 . + 0 ID=cds-WP_002212261.1;Parent=gene-YPIP275_RS22060;Dbxref=GenBank:WP_002212261.1;Name=WP_002212261.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393048.1;locus_tag=YPIP275_RS22060;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_002212261.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 15042 15425 . + . ID=gene-YPIP275_RS22065;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=YPIP275_RS22065;old_locus_tag=YPIP275_0748 NZ_AAOS02000034.1 Protein Homology CDS 15042 15425 . + 0 ID=cds-WP_002212262.1;Parent=gene-YPIP275_RS22065;Dbxref=GenBank:WP_002212262.1;Name=WP_002212262.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223773.1;locus_tag=YPIP275_RS22065;product=F0F1 ATP synthase subunit I;protein_id=WP_002212262.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 15465 16289 . + . ID=gene-YPIP275_RS22070;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=YPIP275_RS22070;old_locus_tag=YPIP275_0749 NZ_AAOS02000034.1 Protein Homology CDS 15465 16289 . + 0 ID=cds-WP_002228150.1;Parent=gene-YPIP275_RS22070;Dbxref=GenBank:WP_002228150.1;Name=WP_002228150.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228150.1;locus_tag=YPIP275_RS22070;product=F0F1 ATP synthase subunit A;protein_id=WP_002228150.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 16339 16578 . + . ID=gene-YPIP275_RS22075;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=YPIP275_RS22075;old_locus_tag=YPIP275_0750 NZ_AAOS02000034.1 Protein Homology CDS 16339 16578 . + 0 ID=cds-WP_000429386.1;Parent=gene-YPIP275_RS22075;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=YPIP275_RS22075;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 16640 17110 . + . ID=gene-YPIP275_RS22080;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=YPIP275_RS22080;old_locus_tag=YPIP275_0751 NZ_AAOS02000034.1 Protein Homology CDS 16640 17110 . + 0 ID=cds-WP_002220762.1;Parent=gene-YPIP275_RS22080;Dbxref=GenBank:WP_002220762.1;Name=WP_002220762.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=YPIP275_RS22080;product=F0F1 ATP synthase subunit B;protein_id=WP_002220762.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 17125 17658 . + . ID=gene-YPIP275_RS22085;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=YPIP275_RS22085;old_locus_tag=YPIP275_0752 NZ_AAOS02000034.1 Protein Homology CDS 17125 17658 . + 0 ID=cds-WP_002220760.1;Parent=gene-YPIP275_RS22085;Dbxref=GenBank:WP_002220760.1;Name=WP_002220760.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=YPIP275_RS22085;product=F0F1 ATP synthase subunit delta;protein_id=WP_002220760.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 17673 19214 . + . ID=gene-YPIP275_RS22090;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS22090;old_locus_tag=YPIP275_0753 NZ_AAOS02000034.1 Protein Homology CDS 17673 19214 . + 0 ID=cds-WP_002220758.1;Parent=gene-YPIP275_RS22090;Dbxref=GenBank:WP_002220758.1;Name=WP_002220758.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=YPIP275_RS22090;product=F0F1 ATP synthase subunit alpha;protein_id=WP_002220758.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 19276 20139 . + . ID=gene-YPIP275_RS22095;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=YPIP275_RS22095;old_locus_tag=YPIP275_0754 NZ_AAOS02000034.1 Protein Homology CDS 19276 20139 . + 0 ID=cds-WP_002220756.1;Parent=gene-YPIP275_RS22095;Dbxref=GenBank:WP_002220756.1;Name=WP_002220756.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=YPIP275_RS22095;product=F0F1 ATP synthase subunit gamma;protein_id=WP_002220756.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 20295 21677 . + . ID=gene-YPIP275_RS22100;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=YPIP275_RS22100;old_locus_tag=YPIP275_0755 NZ_AAOS02000034.1 Protein Homology CDS 20295 21677 . + 0 ID=cds-WP_002220753.1;Parent=gene-YPIP275_RS22100;Dbxref=GenBank:WP_002220753.1;Name=WP_002220753.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312701.1;locus_tag=YPIP275_RS22100;product=F0F1 ATP synthase subunit beta;protein_id=WP_002220753.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 21699 22121 . + . ID=gene-YPIP275_RS22105;Name=YPIP275_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22105;old_locus_tag=YPIP275_0756 NZ_AAOS02000034.1 Protein Homology CDS 21699 22121 . + 0 ID=cds-WP_002215546.1;Parent=gene-YPIP275_RS22105;Dbxref=GenBank:WP_002215546.1;Name=WP_002215546.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215546.1;locus_tag=YPIP275_RS22105;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_002215546.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 22742 24112 . + . ID=gene-YPIP275_RS22110;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=YPIP275_RS22110;old_locus_tag=YPIP275_0757 NZ_AAOS02000034.1 Protein Homology CDS 22742 24112 . + 0 ID=cds-WP_002215550.1;Parent=gene-YPIP275_RS22110;Dbxref=GenBank:WP_002215550.1;Name=WP_002215550.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215550.1;locus_tag=YPIP275_RS22110;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_002215550.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 24313 26142 . + . ID=gene-YPIP275_RS22115;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=YPIP275_RS22115;old_locus_tag=YPIP275_0758 NZ_AAOS02000034.1 Protein Homology CDS 24313 26142 . + 0 ID=cds-WP_002215552.1;Parent=gene-YPIP275_RS22115;Dbxref=GenBank:WP_002215552.1;Name=WP_002215552.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=L-glutamine:D-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709542.1;locus_tag=YPIP275_RS22115;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_002215552.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 26625 27665 . + . ID=gene-YPIP275_RS22120;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=YPIP275_RS22120;old_locus_tag=YPIP275_0760 NZ_AAOS02000034.1 Protein Homology CDS 26625 27665 . + 0 ID=cds-WP_002215557.1;Parent=gene-YPIP275_RS22120;Dbxref=GenBank:WP_002215557.1;Name=WP_002215557.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=YPIP275_RS22120;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_002215557.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 27894 28850 . + . ID=gene-YPIP275_RS22125;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=YPIP275_RS22125;old_locus_tag=YPIP275_0761 NZ_AAOS02000034.1 Protein Homology CDS 27894 28850 . + 0 ID=cds-WP_002215558.1;Parent=gene-YPIP275_RS22125;Dbxref=GenBank:WP_002215558.1;Name=WP_002215558.1;Ontology_term=GO:0006817,GO:0055085,GO:0005315,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215558.1;locus_tag=YPIP275_RS22125;product=phosphate ABC transporter permease PstC;protein_id=WP_002215558.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 28852 29739 . + . ID=gene-YPIP275_RS22130;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=YPIP275_RS22130;old_locus_tag=YPIP275_0762 NZ_AAOS02000034.1 Protein Homology CDS 28852 29739 . + 0 ID=cds-WP_002215560.1;Parent=gene-YPIP275_RS22130;Dbxref=GenBank:WP_002215560.1;Name=WP_002215560.1;Ontology_term=GO:0035435,GO:0005315,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215560.1;locus_tag=YPIP275_RS22130;product=phosphate ABC transporter permease PstA;protein_id=WP_002215560.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 29820 30596 . + . ID=gene-YPIP275_RS22135;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=YPIP275_RS22135;old_locus_tag=YPIP275_0763 NZ_AAOS02000034.1 Protein Homology CDS 29820 30596 . + 0 ID=cds-WP_002215562.1;Parent=gene-YPIP275_RS22135;Dbxref=GenBank:WP_002215562.1;Name=WP_002215562.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004718216.1;locus_tag=YPIP275_RS22135;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_002215562.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 30684 31406 . + . ID=gene-YPIP275_RS22140;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=YPIP275_RS22140;old_locus_tag=YPIP275_0764 NZ_AAOS02000034.1 Protein Homology CDS 30684 31406 . + 0 ID=cds-WP_002215564.1;Parent=gene-YPIP275_RS22140;Dbxref=GenBank:WP_002215564.1;Name=WP_002215564.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674035.1;locus_tag=YPIP275_RS22140;product=phosphate signaling complex protein PhoU;protein_id=WP_002215564.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 31702 32373 . + . ID=gene-YPIP275_RS22145;Name=YPIP275_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22145;old_locus_tag=YPIP275_0765 NZ_AAOS02000034.1 Protein Homology CDS 31702 32373 . + 0 ID=cds-WP_002228151.1;Parent=gene-YPIP275_RS22145;Dbxref=GenBank:WP_002228151.1;Name=WP_002228151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583547.1;locus_tag=YPIP275_RS22145;product=bactofilin family protein;protein_id=WP_002228151.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 32593 33447 . + . ID=gene-YPIP275_RS22150;Name=YPIP275_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22150;old_locus_tag=YPIP275_0766 NZ_AAOS02000034.1 Protein Homology CDS 32593 33447 . + 0 ID=cds-WP_002215568.1;Parent=gene-YPIP275_RS22150;Dbxref=GenBank:WP_002215568.1;Name=WP_002215568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005161140.1;locus_tag=YPIP275_RS22150;product=ABC transporter substrate-binding protein;protein_id=WP_002215568.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 33630 34367 . + . ID=gene-YPIP275_RS22155;Name=YPIP275_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22155;old_locus_tag=YPIP275_0767 NZ_AAOS02000034.1 Protein Homology CDS 33630 34367 . + 0 ID=cds-WP_002215571.1;Parent=gene-YPIP275_RS22155;Dbxref=GenBank:WP_002215571.1;Name=WP_002215571.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875705.1;locus_tag=YPIP275_RS22155;product=amino acid ABC transporter permease;protein_id=WP_002215571.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 34369 35124 . + . ID=gene-YPIP275_RS22160;Name=YPIP275_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22160;old_locus_tag=YPIP275_0768 NZ_AAOS02000034.1 Protein Homology CDS 34369 35124 . + 0 ID=cds-WP_002215573.1;Parent=gene-YPIP275_RS22160;Dbxref=GenBank:WP_002215573.1;Name=WP_002215573.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193355.1;locus_tag=YPIP275_RS22160;product=amino acid ABC transporter permease;protein_id=WP_002215573.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 35159 35827 . - . ID=gene-YPIP275_RS22165;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=YPIP275_RS22165;old_locus_tag=YPIP275_0769 NZ_AAOS02000034.1 Protein Homology CDS 35159 35827 . - 0 ID=cds-WP_002215575.1;Parent=gene-YPIP275_RS22165;Dbxref=GenBank:WP_002215575.1;Name=WP_002215575.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215575.1;locus_tag=YPIP275_RS22165;product=6-phosphogluconate phosphatase;protein_id=WP_002215575.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 35902 36000 . - . ID=gene-YPIP275_RS27960;Name=YPIP275_RS27960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27960 NZ_AAOS02000034.1 Protein Homology CDS 35902 36000 . - 0 ID=cds-WP_071525562.1;Parent=gene-YPIP275_RS27960;Dbxref=GenBank:WP_071525562.1;Name=WP_071525562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430096.1;locus_tag=YPIP275_RS27960;product=gluconate 5-dehydrogenase;protein_id=WP_071525562.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 36320 37648 . + . ID=gene-YPIP275_RS22170;Name=YPIP275_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22170;old_locus_tag=YPIP275_0770 NZ_AAOS02000034.1 Protein Homology CDS 36320 37648 . + 0 ID=cds-WP_002215577.1;Parent=gene-YPIP275_RS22170;Dbxref=GenBank:WP_002215577.1;Name=WP_002215577.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175146.1;locus_tag=YPIP275_RS22170;product=NCS2 family permease;protein_id=WP_002215577.1;transl_table=11 NZ_AAOS02000034.1 RefSeq pseudogene 37821 37969 . - . ID=gene-YPIP275_RS28965;Name=YPIP275_RS28965;end_range=37969,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28965;partial=true;pseudo=true;start_range=.,37821 NZ_AAOS02000034.1 Protein Homology CDS 37821 37969 . - 0 ID=cds-YPIP275_RS28965;Parent=gene-YPIP275_RS28965;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=37969,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=YPIP275_RS28965;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,37821;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 38193 38813 . + . ID=gene-YPIP275_RS22175;Name=YPIP275_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22175;old_locus_tag=YPIP275_0771 NZ_AAOS02000034.1 Protein Homology CDS 38193 38813 . + 0 ID=cds-WP_002215581.1;Parent=gene-YPIP275_RS22175;Dbxref=GenBank:WP_002215581.1;Name=WP_002215581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215581.1;locus_tag=YPIP275_RS22175;product=hypothetical protein;protein_id=WP_002215581.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 38875 39156 . + . ID=gene-YPIP275_RS22180;Name=YPIP275_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS22180;old_locus_tag=YPIP275_0772 NZ_AAOS02000034.1 Protein Homology CDS 38875 39156 . + 0 ID=cds-WP_002215583.1;Parent=gene-YPIP275_RS22180;Dbxref=GenBank:WP_002215583.1;Name=WP_002215583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193351.1;locus_tag=YPIP275_RS22180;product=hypothetical protein;protein_id=WP_002215583.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 39248 39541 . + . ID=gene-YPIP275_RS27970;Name=YPIP275_RS27970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27970 NZ_AAOS02000034.1 Protein Homology CDS 39248 39541 . + 0 ID=cds-WP_002215585.1;Parent=gene-YPIP275_RS27970;Dbxref=GenBank:WP_002215585.1;Name=WP_002215585.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018538.8;locus_tag=YPIP275_RS27970;product=DUF1240 domain-containing protein;protein_id=WP_002215585.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 39624 40823 . - . ID=gene-YPIP275_RS22185;Name=fabV;gbkey=Gene;gene=fabV;gene_biotype=protein_coding;locus_tag=YPIP275_RS22185;old_locus_tag=YPIP275_0773 NZ_AAOS02000034.1 Protein Homology CDS 39624 40823 . - 0 ID=cds-WP_002215588.1;Parent=gene-YPIP275_RS22185;Dbxref=GenBank:WP_002215588.1;Name=WP_002215588.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabV;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171985.1;locus_tag=YPIP275_RS22185;product=enoyl-ACP reductase FabV;protein_id=WP_002215588.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 41009 42373 . - . ID=gene-YPIP275_RS22190;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=YPIP275_RS22190;old_locus_tag=YPIP275_0774 NZ_AAOS02000034.1 Protein Homology CDS 41009 42373 . - 0 ID=cds-WP_002220740.1;Parent=gene-YPIP275_RS22190;Dbxref=GenBank:WP_002220740.1;Name=WP_002220740.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015848543.1;locus_tag=YPIP275_RS22190;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_002220740.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 42516 44156 . - . ID=gene-YPIP275_RS22195;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=YPIP275_RS22195;old_locus_tag=YPIP275_0775 NZ_AAOS02000034.1 Protein Homology CDS 42516 44156 . - 0 ID=cds-WP_002220739.1;Parent=gene-YPIP275_RS22195;Dbxref=GenBank:WP_002220739.1;Name=WP_002220739.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220739.1;locus_tag=YPIP275_RS22195;product=membrane protein insertase YidC;protein_id=WP_002220739.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 44159 44416 . - . ID=gene-YPIP275_RS22200;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=YPIP275_RS22200 NZ_AAOS02000034.1 Protein Homology CDS 44159 44416 . - 0 ID=cds-WP_002228756.1;Parent=gene-YPIP275_RS22200;Dbxref=GenBank:WP_002228756.1;Name=WP_002228756.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368639.1;locus_tag=YPIP275_RS22200;product=membrane protein insertion efficiency factor YidD;protein_id=WP_002228756.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 44380 44739 . - . ID=gene-YPIP275_RS22205;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS22205 NZ_AAOS02000034.1 Protein Homology CDS 44380 44739 . - 0 ID=cds-WP_002228153.1;Parent=gene-YPIP275_RS22205;Dbxref=GenBank:WP_002228153.1;Name=WP_002228153.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=YPIP275_RS22205;product=ribonuclease P protein component;protein_id=WP_002228153.1;transl_table=11 NZ_AAOS02000034.1 RefSeq gene 44758 44898 . - . ID=gene-YPIP275_RS22210;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=YPIP275_RS22210;old_locus_tag=YPIP275_0778 NZ_AAOS02000034.1 Protein Homology CDS 44758 44898 . - 0 ID=cds-WP_002220736.1;Parent=gene-YPIP275_RS22210;Dbxref=GenBank:WP_002220736.1;Name=WP_002220736.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=YPIP275_RS22210;product=50S ribosomal protein L34;protein_id=WP_002220736.1;transl_table=11 ##sequence-region NZ_AAOS02000033.1 1 46208 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000033.1 RefSeq region 1 46208 . + . ID=NZ_AAOS02000033.1:1..46208;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000033.1 RefSeq gene 266 553 . - . ID=gene-YPIP275_RS21735;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=YPIP275_RS21735;old_locus_tag=YPIP275_0001 NZ_AAOS02000033.1 Protein Homology CDS 266 553 . - 0 ID=cds-WP_002212202.1;Parent=gene-YPIP275_RS21735;Dbxref=GenBank:WP_002212202.1;Name=WP_002212202.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212202.1;locus_tag=YPIP275_RS21735;product=LexA regulated protein;protein_id=WP_002212202.1;transl_table=11 NZ_AAOS02000033.1 RefSeq pseudogene 885 1651 . - . ID=gene-YPIP275_RS21745;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=pseudogene;locus_tag=YPIP275_RS21745;old_locus_tag=YPIP275_0002;pseudo=true NZ_AAOS02000033.1 Protein Homology CDS 885 1651 . - 0 ID=cds-YPIP275_RS21745;Parent=gene-YPIP275_RS21745;Note=frameshifted;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105497.1;locus_tag=YPIP275_RS21745;product=esterase;pseudo=true;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 2362 2613 . + . ID=gene-YPIP275_RS21750;Name=YPIP275_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21750;old_locus_tag=YPIP275_0004 NZ_AAOS02000033.1 Protein Homology CDS 2362 2613 . + 0 ID=cds-WP_002212204.1;Parent=gene-YPIP275_RS21750;Dbxref=GenBank:WP_002212204.1;Name=WP_002212204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212204.1;locus_tag=YPIP275_RS21750;product=hypothetical protein;protein_id=WP_002212204.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 2776 2961 . - . ID=gene-YPIP275_RS21755;Name=YPIP275_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21755;old_locus_tag=YPIP275_0005 NZ_AAOS02000033.1 Protein Homology CDS 2776 2961 . - 0 ID=cds-WP_002215393.1;Parent=gene-YPIP275_RS21755;Dbxref=GenBank:WP_002215393.1;Name=WP_002215393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215393.1;locus_tag=YPIP275_RS21755;product=hypothetical protein;protein_id=WP_002215393.1;transl_table=11 NZ_AAOS02000033.1 RefSeq pseudogene 3047 3307 . - . ID=gene-YPIP275_RS21760;Name=YPIP275_RS21760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS21760;old_locus_tag=YPIP275_0006;partial=true;pseudo=true;start_range=.,3047 NZ_AAOS02000033.1 Protein Homology CDS 3047 3307 . - 0 ID=cds-YPIP275_RS21760;Parent=gene-YPIP275_RS21760;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0006313,GO:0015074,GO:0032196,GO:0003677,GO:0004803,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA transposition|0006313||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611473.1;locus_tag=YPIP275_RS21760;partial=true;product=transposase;pseudo=true;start_range=.,3047;transl_table=11 NZ_AAOS02000033.1 RefSeq pseudogene 3377 3787 . - . ID=gene-YPIP275_RS21765;Name=YPIP275_RS21765;end_range=3787,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS21765;old_locus_tag=YPIP275_0007;partial=true;pseudo=true;start_range=.,3377 NZ_AAOS02000033.1 Protein Homology CDS 3377 3787 . - 0 ID=cds-YPIP275_RS21765;Parent=gene-YPIP275_RS21765;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3787,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210713.1;locus_tag=YPIP275_RS21765;partial=true;product=phage integrase central domain-containing protein;pseudo=true;start_range=.,3377;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 3854 4636 . - . ID=gene-YPIP275_RS21770;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS21770;old_locus_tag=YPIP275_0008 NZ_AAOS02000033.1 Protein Homology CDS 3854 4636 . - 0 ID=cds-WP_001317493.1-9;Parent=gene-YPIP275_RS21770;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS21770;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 4633 5655 . - . ID=gene-YPIP275_RS21775;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21775;old_locus_tag=YPIP275_0009 NZ_AAOS02000033.1 Protein Homology CDS 4633 5655 . - 0 ID=cds-WP_000255944.1-5;Parent=gene-YPIP275_RS21775;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS21775;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 5745 6479 . + . ID=gene-YPIP275_RS21780;Name=YPIP275_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21780;old_locus_tag=YPIP275_0010 NZ_AAOS02000033.1 Protein Homology CDS 5745 6479 . + 0 ID=cds-WP_002228371.1;Parent=gene-YPIP275_RS21780;Dbxref=GenBank:WP_002228371.1;Name=WP_002228371.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192850.1;locus_tag=YPIP275_RS21780;product=polysaccharide deacetylase family protein;protein_id=WP_002228371.1;transl_table=11 NZ_AAOS02000033.1 RefSeq pseudogene 6607 6675 . + . ID=gene-YPIP275_RS29290;Name=YPIP275_RS29290;end_range=6675,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29290;partial=true;pseudo=true NZ_AAOS02000033.1 Protein Homology CDS 6607 6675 . + 0 ID=cds-YPIP275_RS29290;Parent=gene-YPIP275_RS29290;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=6675,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378124.1;locus_tag=YPIP275_RS29290;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 6709 7713 . - . ID=gene-YPIP275_RS21785;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=YPIP275_RS21785;old_locus_tag=YPIP275_0011 NZ_AAOS02000033.1 Protein Homology CDS 6709 7713 . - 0 ID=cds-WP_002215933.1;Parent=gene-YPIP275_RS21785;Dbxref=GenBank:WP_002215933.1;Name=WP_002215933.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906274.1;locus_tag=YPIP275_RS21785;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_002215933.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 7761 8927 . - . ID=gene-YPIP275_RS21790;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=YPIP275_RS21790;old_locus_tag=YPIP275_0012 NZ_AAOS02000033.1 Protein Homology CDS 7761 8927 . - 0 ID=cds-WP_002212209.1;Parent=gene-YPIP275_RS21790;Dbxref=GenBank:WP_002212209.1;Name=WP_002212209.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212209.1;locus_tag=YPIP275_RS21790;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_002212209.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 8920 10119 . - . ID=gene-YPIP275_RS21795;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=YPIP275_RS21795;old_locus_tag=YPIP275_0013 NZ_AAOS02000033.1 Protein Homology CDS 8920 10119 . - 0 ID=cds-WP_002212210.1;Parent=gene-YPIP275_RS21795;Dbxref=GenBank:WP_002212210.1;Name=WP_002212210.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212210.1;locus_tag=YPIP275_RS21795;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_002212210.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 10795 11766 . - . ID=gene-YPIP275_RS21800;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=YPIP275_RS21800;old_locus_tag=YPIP275_0014 NZ_AAOS02000033.1 Protein Homology CDS 10795 11766 . - 0 ID=cds-WP_002212211.1;Parent=gene-YPIP275_RS21800;Dbxref=GenBank:WP_002212211.1;Name=WP_002212211.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104754.1;locus_tag=YPIP275_RS21800;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_002212211.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 11873 14023 . - . ID=gene-YPIP275_RS21805;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=YPIP275_RS21805;old_locus_tag=YPIP275_0015 NZ_AAOS02000033.1 Protein Homology CDS 11873 14023 . - 0 ID=cds-WP_002212212.1;Parent=gene-YPIP275_RS21805;Dbxref=GenBank:WP_002212212.1;Name=WP_002212212.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005176973.1;locus_tag=YPIP275_RS21805;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_002212212.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 14005 14409 . - . ID=gene-YPIP275_RS21810;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=YPIP275_RS21810;old_locus_tag=YPIP275_0016 NZ_AAOS02000033.1 Protein Homology CDS 14005 14409 . - 0 ID=cds-WP_002215935.1;Parent=gene-YPIP275_RS21810;Dbxref=GenBank:WP_002215935.1;Name=WP_002215935.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146428.1;locus_tag=YPIP275_RS21810;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_002215935.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 14423 14659 . - . ID=gene-YPIP275_RS21815;Name=YPIP275_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21815;old_locus_tag=YPIP275_0017 NZ_AAOS02000033.1 Protein Homology CDS 14423 14659 . - 0 ID=cds-WP_002212214.1;Parent=gene-YPIP275_RS21815;Dbxref=GenBank:WP_002212214.1;Name=WP_002212214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212214.1;locus_tag=YPIP275_RS21815;product=redoxin NrdH;protein_id=WP_002212214.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 15180 15545 . + . ID=gene-YPIP275_RS21820;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=YPIP275_RS21820;old_locus_tag=YPIP275_0018 NZ_AAOS02000033.1 Protein Homology CDS 15180 15545 . + 0 ID=cds-WP_002212215.1;Parent=gene-YPIP275_RS21820;Dbxref=GenBank:WP_002212215.1;Name=WP_002212215.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016673947.1;locus_tag=YPIP275_RS21820;product=acid resistance repetitive basic protein Asr;protein_id=WP_002212215.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 16023 16358 . + . ID=gene-YPIP275_RS21825;Name=YPIP275_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21825;old_locus_tag=YPIP275_0019 NZ_AAOS02000033.1 Protein Homology CDS 16023 16358 . + 0 ID=cds-WP_002212216.1;Parent=gene-YPIP275_RS21825;Dbxref=GenBank:WP_002212216.1;Name=WP_002212216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212216.1;locus_tag=YPIP275_RS21825;product=DUF2002 family protein;protein_id=WP_002212216.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 16456 16905 . - . ID=gene-YPIP275_RS21830;Name=YPIP275_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21830;old_locus_tag=YPIP275_0020 NZ_AAOS02000033.1 Protein Homology CDS 16456 16905 . - 0 ID=cds-WP_002212217.1;Parent=gene-YPIP275_RS21830;Dbxref=GenBank:WP_002212217.1;Name=WP_002212217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104755.1;locus_tag=YPIP275_RS21830;product=DUF1198 domain-containing protein;protein_id=WP_002212217.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 17271 18479 . + . ID=gene-YPIP275_RS21835;Name=YPIP275_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21835;old_locus_tag=YPIP275_0022 NZ_AAOS02000033.1 Protein Homology CDS 17271 18479 . + 0 ID=cds-WP_002209743.1-4;Parent=gene-YPIP275_RS21835;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS21835;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000033.1 RefSeq pseudogene 18516 18731 . - . ID=gene-YPIP275_RS21840;Name=YPIP275_RS21840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS21840;old_locus_tag=YPIP275_0023;partial=true;pseudo=true;start_range=.,18516 NZ_AAOS02000033.1 Protein Homology CDS 18516 18731 . - 0 ID=cds-YPIP275_RS21840;Parent=gene-YPIP275_RS21840;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224857.1;locus_tag=YPIP275_RS21840;partial=true;product=MbeD/MobD family mobilization/exclusion family protein;pseudo=true;start_range=.,18516;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 19239 19451 . + . ID=gene-YPIP275_RS21845;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=YPIP275_RS21845;old_locus_tag=YPIP275_0024 NZ_AAOS02000033.1 Protein Homology CDS 19239 19451 . + 0 ID=cds-WP_002212220.1;Parent=gene-YPIP275_RS21845;Dbxref=GenBank:WP_002212220.1;Name=WP_002212220.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210052.1;locus_tag=YPIP275_RS21845;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_002212220.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 20349 21926 . + . ID=gene-YPIP275_RS21850;Name=YPIP275_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21850;old_locus_tag=YPIP275_0026 NZ_AAOS02000033.1 Protein Homology CDS 20349 21926 . + 0 ID=cds-WP_002215276.1;Parent=gene-YPIP275_RS21850;Dbxref=GenBank:WP_002215276.1;Name=WP_002215276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192846.1;locus_tag=YPIP275_RS21850;product=ABC transporter substrate-binding protein;protein_id=WP_002215276.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 21926 22894 . + . ID=gene-YPIP275_RS21855;Name=YPIP275_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21855;old_locus_tag=YPIP275_0027 NZ_AAOS02000033.1 Protein Homology CDS 21926 22894 . + 0 ID=cds-WP_002212223.1;Parent=gene-YPIP275_RS21855;Dbxref=GenBank:WP_002212223.1;Name=WP_002212223.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212223.1;locus_tag=YPIP275_RS21855;product=ABC transporter permease;protein_id=WP_002212223.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 22891 23697 . + . ID=gene-YPIP275_RS21860;Name=YPIP275_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21860;old_locus_tag=YPIP275_0028 NZ_AAOS02000033.1 Protein Homology CDS 22891 23697 . + 0 ID=cds-WP_002212224.1;Parent=gene-YPIP275_RS21860;Dbxref=GenBank:WP_002212224.1;Name=WP_002212224.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212224.1;locus_tag=YPIP275_RS21860;product=ABC transporter permease;protein_id=WP_002212224.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 23697 24503 . + . ID=gene-YPIP275_RS21865;Name=YPIP275_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21865;old_locus_tag=YPIP275_0029 NZ_AAOS02000033.1 Protein Homology CDS 23697 24503 . + 0 ID=cds-WP_002212225.1;Parent=gene-YPIP275_RS21865;Dbxref=GenBank:WP_002212225.1;Name=WP_002212225.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229969.1;locus_tag=YPIP275_RS21865;product=ATP-binding cassette domain-containing protein;protein_id=WP_002212225.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 24496 25161 . + . ID=gene-YPIP275_RS21870;Name=YPIP275_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21870;old_locus_tag=YPIP275_0030 NZ_AAOS02000033.1 Protein Homology CDS 24496 25161 . + 0 ID=cds-WP_002212226.1;Parent=gene-YPIP275_RS21870;Dbxref=GenBank:WP_002212226.1;Name=WP_002212226.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212226.1;locus_tag=YPIP275_RS21870;product=ATP-binding cassette domain-containing protein;protein_id=WP_002212226.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 26360 26662 . + . ID=gene-YPIP275_RS21875;Name=YPIP275_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21875;old_locus_tag=YPIP275_0032 NZ_AAOS02000033.1 Protein Homology CDS 26360 26662 . + 0 ID=cds-WP_002215288.1;Parent=gene-YPIP275_RS21875;Dbxref=GenBank:WP_002215288.1;Name=WP_002215288.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003444963.1;locus_tag=YPIP275_RS21875;product=urease subunit gamma;protein_id=WP_002215288.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 26715 27149 . + . ID=gene-YPIP275_RS21880;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=YPIP275_RS21880;old_locus_tag=YPIP275_0033 NZ_AAOS02000033.1 Protein Homology CDS 26715 27149 . + 0 ID=cds-WP_002212228.1;Parent=gene-YPIP275_RS21880;Dbxref=GenBank:WP_002212228.1;Name=WP_002212228.1;Ontology_term=GO:0043419,GO:0009039,GO:0035550;gbkey=CDS;gene=ureB;go_component=urease complex|0035550||IEA;go_function=urease activity|0009039||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082131.1;locus_tag=YPIP275_RS21880;product=urease subunit beta;protein_id=WP_002212228.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 27239 28957 . + . ID=gene-YPIP275_RS21885;Name=YPIP275_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21885;old_locus_tag=YPIP275_0034 NZ_AAOS02000033.1 Protein Homology CDS 27239 28957 . + 0 ID=cds-WP_002212229.1;Parent=gene-YPIP275_RS21885;Dbxref=GenBank:WP_002212229.1;Name=WP_002212229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002422514.1;locus_tag=YPIP275_RS21885;product=urease subunit alpha;protein_id=WP_002212229.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 29253 29948 . + . ID=gene-YPIP275_RS21890;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=YPIP275_RS21890;old_locus_tag=YPIP275_0035 NZ_AAOS02000033.1 Protein Homology CDS 29253 29948 . + 0 ID=cds-WP_002212230.1;Parent=gene-YPIP275_RS21890;Dbxref=GenBank:WP_002212230.1;Name=WP_002212230.1;gbkey=CDS;gene=ureE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192844.1;locus_tag=YPIP275_RS21890;product=urease accessory protein UreE;protein_id=WP_002212230.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 29970 30656 . + . ID=gene-YPIP275_RS21895;Name=YPIP275_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21895;old_locus_tag=YPIP275_0036 NZ_AAOS02000033.1 Protein Homology CDS 29970 30656 . + 0 ID=cds-WP_002212231.1;Parent=gene-YPIP275_RS21895;Dbxref=GenBank:WP_002212231.1;Name=WP_002212231.1;Ontology_term=GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005188829.1;locus_tag=YPIP275_RS21895;product=urease accessory protein UreF;protein_id=WP_002212231.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 30783 31445 . + . ID=gene-YPIP275_RS21900;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=YPIP275_RS21900;old_locus_tag=YPIP275_0037 NZ_AAOS02000033.1 Protein Homology CDS 30783 31445 . + 0 ID=cds-WP_002212232.1;Parent=gene-YPIP275_RS21900;Dbxref=GenBank:WP_002212232.1;Name=WP_002212232.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212232.1;locus_tag=YPIP275_RS21900;product=urease accessory protein UreG;protein_id=WP_002212232.1;transl_table=11 NZ_AAOS02000033.1 RefSeq pseudogene 31442 32408 . + . ID=gene-YPIP275_RS21905;Name=YPIP275_RS21905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS21905;old_locus_tag=YPIP275_0038;pseudo=true NZ_AAOS02000033.1 Protein Homology CDS 31442 32408 . + 0 ID=cds-YPIP275_RS21905;Parent=gene-YPIP275_RS21905;Note=frameshifted;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082134.1;locus_tag=YPIP275_RS21905;product=urease accessory protein UreD;pseudo=true;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 32600 33592 . + . ID=gene-YPIP275_RS21910;Name=yut;gbkey=Gene;gene=yut;gene_biotype=protein_coding;locus_tag=YPIP275_RS21910;old_locus_tag=YPIP275_0039 NZ_AAOS02000033.1 Protein Homology CDS 32600 33592 . + 0 ID=cds-WP_002212233.1;Parent=gene-YPIP275_RS21910;Dbxref=GenBank:WP_002212233.1;Name=WP_002212233.1;Ontology_term=GO:0015840,GO:0015204,GO:0016020;gbkey=CDS;gene=yut;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104759.1;locus_tag=YPIP275_RS21910;product=urea transporter;protein_id=WP_002212233.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 33741 34799 . + . ID=gene-YPIP275_RS21915;Name=YPIP275_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21915;old_locus_tag=YPIP275_0040 NZ_AAOS02000033.1 Protein Homology CDS 33741 34799 . + 0 ID=cds-WP_002212234.1;Parent=gene-YPIP275_RS21915;Dbxref=GenBank:WP_002212234.1;Name=WP_002212234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192840.1;locus_tag=YPIP275_RS21915;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_002212234.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 34968 35297 . - . ID=gene-YPIP275_RS21920;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=YPIP275_RS21920;old_locus_tag=YPIP275_0041 NZ_AAOS02000033.1 Protein Homology CDS 34968 35297 . - 0 ID=cds-WP_002212235.1;Parent=gene-YPIP275_RS21920;Dbxref=GenBank:WP_002212235.1;Name=WP_002212235.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906270.1;locus_tag=YPIP275_RS21920;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_002212235.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 35915 37090 . + . ID=gene-YPIP275_RS21930;Name=kch;gbkey=Gene;gene=kch;gene_biotype=protein_coding;locus_tag=YPIP275_RS21930;old_locus_tag=YPIP275_0042 NZ_AAOS02000033.1 Protein Homology CDS 35915 37090 . + 0 ID=cds-WP_002212236.1;Parent=gene-YPIP275_RS21930;Dbxref=GenBank:WP_002212236.1;Name=WP_002212236.1;gbkey=CDS;gene=kch;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212236.1;locus_tag=YPIP275_RS21930;product=voltage-gated potassium channel protein;protein_id=WP_002212236.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 37188 37592 . - . ID=gene-YPIP275_RS21935;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=YPIP275_RS21935;old_locus_tag=YPIP275_0043 NZ_AAOS02000033.1 Protein Homology CDS 37188 37592 . - 0 ID=cds-WP_002212237.1;Parent=gene-YPIP275_RS21935;Dbxref=GenBank:WP_002212237.1;Name=WP_002212237.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212237.1;locus_tag=YPIP275_RS21935;product=fluoride efflux transporter CrcB;protein_id=WP_002212237.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 37608 37988 . - . ID=gene-YPIP275_RS21940;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=YPIP275_RS21940;old_locus_tag=YPIP275_0044 NZ_AAOS02000033.1 Protein Homology CDS 37608 37988 . - 0 ID=cds-WP_002212238.1;Parent=gene-YPIP275_RS21940;Dbxref=GenBank:WP_002212238.1;Name=WP_002212238.1;Ontology_term=GO:1903424,GO:1903425,GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;go_function=fluoride transmembrane transporter activity|1903425||IEA;go_process=fluoride transmembrane transport|1903424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005172952.1;locus_tag=YPIP275_RS21940;product=fluoride efflux transporter CrcB;protein_id=WP_002212238.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 38077 38256 . - . ID=gene-YPIP275_RS21945;Name=YPIP275_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21945;old_locus_tag=YPIP275_0045 NZ_AAOS02000033.1 Protein Homology CDS 38077 38256 . - 0 ID=cds-WP_002212239.1;Parent=gene-YPIP275_RS21945;Dbxref=GenBank:WP_002212239.1;Name=WP_002212239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212239.1;locus_tag=YPIP275_RS21945;product=hypothetical protein;protein_id=WP_002212239.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 39029 39346 . + . ID=gene-YPIP275_RS21950;Name=YPIP275_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21950;old_locus_tag=YPIP275_0046 NZ_AAOS02000033.1 Protein Homology CDS 39029 39346 . + 0 ID=cds-WP_002212240.1;Parent=gene-YPIP275_RS21950;Dbxref=GenBank:WP_002212240.1;Name=WP_002212240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212240.1;locus_tag=YPIP275_RS21950;product=PTS sugar transporter subunit IIB;protein_id=WP_002212240.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 39357 40718 . + . ID=gene-YPIP275_RS21955;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=YPIP275_RS21955;old_locus_tag=YPIP275_0047 NZ_AAOS02000033.1 Protein Homology CDS 39357 40718 . + 0 ID=cds-WP_002212241.1;Parent=gene-YPIP275_RS21955;Dbxref=GenBank:WP_002212241.1;Name=WP_002212241.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416251.1;locus_tag=YPIP275_RS21955;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_002212241.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 40885 41232 . + . ID=gene-YPIP275_RS21960;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21960;old_locus_tag=YPIP275_0048 NZ_AAOS02000033.1 Protein Homology CDS 40885 41232 . + 0 ID=cds-WP_002212242.1;Parent=gene-YPIP275_RS21960;Dbxref=GenBank:WP_002212242.1;Name=WP_002212242.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104766.1;locus_tag=YPIP275_RS21960;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_002212242.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 41269 42111 . + . ID=gene-YPIP275_RS21965;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=YPIP275_RS21965;old_locus_tag=YPIP275_0049 NZ_AAOS02000033.1 Protein Homology CDS 41269 42111 . + 0 ID=cds-WP_002227871.1;Parent=gene-YPIP275_RS21965;Dbxref=GenBank:WP_002227871.1;Name=WP_002227871.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227871.1;locus_tag=YPIP275_RS21965;product=transcriptional regulator ChbR;protein_id=WP_002227871.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 42163 42924 . + . ID=gene-YPIP275_RS21970;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=YPIP275_RS21970;old_locus_tag=YPIP275_0050 NZ_AAOS02000033.1 Protein Homology CDS 42163 42924 . + 0 ID=cds-WP_002212244.1;Parent=gene-YPIP275_RS21970;Dbxref=GenBank:WP_002212244.1;Name=WP_002212244.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212244.1;locus_tag=YPIP275_RS21970;product=chitin disaccharide deacetylase;protein_id=WP_002212244.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 43219 43587 . - . ID=gene-YPIP275_RS21980;Name=YPIP275_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21980;old_locus_tag=YPIP275_0052 NZ_AAOS02000033.1 Protein Homology CDS 43219 43587 . - 0 ID=cds-WP_002212246.1;Parent=gene-YPIP275_RS21980;Dbxref=GenBank:WP_002212246.1;Name=WP_002212246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303771.1;locus_tag=YPIP275_RS21980;product=lysozyme inhibitor LprI family protein;protein_id=WP_002212246.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 44082 44609 . + . ID=gene-YPIP275_RS21990;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21990;old_locus_tag=YPIP275_0054 NZ_AAOS02000033.1 Protein Homology CDS 44082 44609 . + 0 ID=cds-WP_002212248.1;Parent=gene-YPIP275_RS21990;Dbxref=GenBank:WP_002212248.1;Name=WP_002212248.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303772.1;locus_tag=YPIP275_RS21990;product=replication initiation negative regulator SeqA;protein_id=WP_002212248.1;transl_table=11 NZ_AAOS02000033.1 RefSeq gene 44682 46208 . + . ID=gene-YPIP275_RS21995;Name=pgm;end_range=46208,.;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=YPIP275_RS21995;old_locus_tag=YPIP275_0055;partial=true NZ_AAOS02000033.1 Protein Homology CDS 44682 46208 . + 0 ID=cds-WP_043940364.1;Parent=gene-YPIP275_RS21995;Dbxref=GenBank:WP_043940364.1;Name=WP_043940364.1;Ontology_term=GO:0005975,GO:0004614;end_range=46208,.;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104769.1;locus_tag=YPIP275_RS21995;partial=true;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_043940364.1;transl_table=11 ##sequence-region NZ_AAOS02000032.1 1 49674 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000032.1 RefSeq region 1 49674 . + . ID=NZ_AAOS02000032.1:1..49674;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000032.1 RefSeq pseudogene 1 406 . + . ID=gene-YPIP275_RS21510;Name=YPIP275_RS21510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS21510;old_locus_tag=YPIP275_0074;partial=true;pseudo=true;start_range=.,1 NZ_AAOS02000032.1 Protein Homology CDS 1 406 . + 1 ID=cds-YPIP275_RS21510;Parent=gene-YPIP275_RS21510;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413996.1;locus_tag=YPIP275_RS21510;partial=true;product=pilus assembly protein CpaE;pseudo=true;start_range=.,1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 418 1704 . + . ID=gene-YPIP275_RS21515;Name=YPIP275_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21515;old_locus_tag=YPIP275_0075 NZ_AAOS02000032.1 Protein Homology CDS 418 1704 . + 0 ID=cds-WP_002213785.1;Parent=gene-YPIP275_RS21515;Dbxref=GenBank:WP_002213785.1;Name=WP_002213785.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683744.1;locus_tag=YPIP275_RS21515;product=TadA family conjugal transfer-associated ATPase;protein_id=WP_002213785.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 1701 2576 . + . ID=gene-YPIP275_RS21520;Name=YPIP275_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21520;old_locus_tag=YPIP275_0076 NZ_AAOS02000032.1 Protein Homology CDS 1701 2576 . + 0 ID=cds-WP_002212164.1;Parent=gene-YPIP275_RS21520;Dbxref=GenBank:WP_002212164.1;Name=WP_002212164.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212164.1;locus_tag=YPIP275_RS21520;product=type II secretion system F family protein;protein_id=WP_002212164.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 2573 3406 . + . ID=gene-YPIP275_RS21525;Name=YPIP275_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21525;old_locus_tag=YPIP275_0077 NZ_AAOS02000032.1 Protein Homology CDS 2573 3406 . + 0 ID=cds-WP_002212165.1;Parent=gene-YPIP275_RS21525;Dbxref=GenBank:WP_002212165.1;Name=WP_002212165.1;Ontology_term=GO:0015628,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193086.1;locus_tag=YPIP275_RS21525;product=type II secretion system F family protein;protein_id=WP_002212165.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 3390 4160 . + . ID=gene-YPIP275_RS21530;Name=YPIP275_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21530;old_locus_tag=YPIP275_0078 NZ_AAOS02000032.1 Protein Homology CDS 3390 4160 . + 0 ID=cds-WP_002212166.1;Parent=gene-YPIP275_RS21530;Dbxref=GenBank:WP_002212166.1;Name=WP_002212166.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212166.1;locus_tag=YPIP275_RS21530;product=tetratricopeptide repeat protein;protein_id=WP_002212166.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 4157 4630 . + . ID=gene-YPIP275_RS21535;Name=YPIP275_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21535;old_locus_tag=YPIP275_0079 NZ_AAOS02000032.1 Protein Homology CDS 4157 4630 . + 0 ID=cds-WP_002357277.1;Parent=gene-YPIP275_RS21535;Dbxref=GenBank:WP_002357277.1;Name=WP_002357277.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193088.1;locus_tag=YPIP275_RS21535;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_002357277.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 4614 5186 . + . ID=gene-YPIP275_RS21540;Name=tadF;gbkey=Gene;gene=tadF;gene_biotype=protein_coding;locus_tag=YPIP275_RS21540;old_locus_tag=YPIP275_0080 NZ_AAOS02000032.1 Protein Homology CDS 4614 5186 . + 0 ID=cds-WP_002212168.1;Parent=gene-YPIP275_RS21540;Dbxref=GenBank:WP_002212168.1;Name=WP_002212168.1;gbkey=CDS;gene=tadF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413999.1;locus_tag=YPIP275_RS21540;product=tight adherence pilus pseudopilin TadF;protein_id=WP_002212168.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 5211 6767 . + . ID=gene-YPIP275_RS21545;Name=YPIP275_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21545;old_locus_tag=YPIP275_0081 NZ_AAOS02000032.1 Protein Homology CDS 5211 6767 . + 0 ID=cds-WP_002212169.1;Parent=gene-YPIP275_RS21545;Dbxref=GenBank:WP_002212169.1;Name=WP_002212169.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104475.1;locus_tag=YPIP275_RS21545;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_002212169.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 6864 7295 . - . ID=gene-YPIP275_RS21550;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=YPIP275_RS21550;old_locus_tag=YPIP275_0082 NZ_AAOS02000032.1 Protein Homology CDS 6864 7295 . - 0 ID=cds-WP_002212170.1;Parent=gene-YPIP275_RS21550;Dbxref=GenBank:WP_002212170.1;Name=WP_002212170.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212170.1;locus_tag=YPIP275_RS21550;product=TonB system transport protein ExbD;protein_id=WP_002212170.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 7299 8336 . - . ID=gene-YPIP275_RS21555;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=YPIP275_RS21555;old_locus_tag=YPIP275_0083 NZ_AAOS02000032.1 Protein Homology CDS 7299 8336 . - 0 ID=cds-WP_002212171.1;Parent=gene-YPIP275_RS21555;Dbxref=GenBank:WP_002212171.1;Name=WP_002212171.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212171.1;locus_tag=YPIP275_RS21555;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_002212171.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 8815 10026 . + . ID=gene-YPIP275_RS21560;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=YPIP275_RS21560;old_locus_tag=YPIP275_0084 NZ_AAOS02000032.1 Protein Homology CDS 8815 10026 . + 0 ID=cds-WP_002212172.1;Parent=gene-YPIP275_RS21560;Dbxref=GenBank:WP_002212172.1;Name=WP_002212172.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212172.1;locus_tag=YPIP275_RS21560;product=cystathionine beta-lyase;protein_id=WP_002212172.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 10219 10881 . + . ID=gene-YPIP275_RS21565;Name=YPIP275_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21565;old_locus_tag=YPIP275_0085 NZ_AAOS02000032.1 Protein Homology CDS 10219 10881 . + 0 ID=cds-WP_002212173.1;Parent=gene-YPIP275_RS21565;Dbxref=GenBank:WP_002212173.1;Name=WP_002212173.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212173.1;locus_tag=YPIP275_RS21565;product=DedA family protein;protein_id=WP_002212173.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 10973 11866 . - . ID=gene-YPIP275_RS21570;Name=YPIP275_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21570;old_locus_tag=YPIP275_0086 NZ_AAOS02000032.1 Protein Homology CDS 10973 11866 . - 0 ID=cds-WP_002213786.1;Parent=gene-YPIP275_RS21570;Dbxref=GenBank:WP_002213786.1;Name=WP_002213786.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683747.1;locus_tag=YPIP275_RS21570;product=AraC family transcriptional regulator;protein_id=WP_002213786.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 12264 13421 . + . ID=gene-YPIP275_RS21575;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=YPIP275_RS21575;old_locus_tag=YPIP275_0087 NZ_AAOS02000032.1 Protein Homology CDS 12264 13421 . + 0 ID=cds-WP_002212174.1;Parent=gene-YPIP275_RS21575;Dbxref=GenBank:WP_002212174.1;Name=WP_002212174.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703098.1;locus_tag=YPIP275_RS21575;product=alcohol dehydrogenase;protein_id=WP_002212174.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 13484 13693 . - . ID=gene-YPIP275_RS21580;Name=YPIP275_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21580 NZ_AAOS02000032.1 Protein Homology CDS 13484 13693 . - 0 ID=cds-WP_002216186.1;Parent=gene-YPIP275_RS21580;Dbxref=GenBank:WP_002216186.1;Name=WP_002216186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216186.1;locus_tag=YPIP275_RS21580;product=hypothetical protein;protein_id=WP_002216186.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 13840 14673 . + . ID=gene-YPIP275_RS21585;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21585;old_locus_tag=YPIP275_0088 NZ_AAOS02000032.1 Protein Homology CDS 13840 14673 . + 0 ID=cds-WP_002212175.1;Parent=gene-YPIP275_RS21585;Dbxref=GenBank:WP_002212175.1;Name=WP_002212175.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212175.1;locus_tag=YPIP275_RS21585;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_002212175.1;transl_table=11 NZ_AAOS02000032.1 RefSeq pseudogene 14695 17039 . - . ID=gene-YPIP275_RS21590;Name=YPIP275_RS21590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS21590;old_locus_tag=YPIP275_0089;pseudo=true NZ_AAOS02000032.1 Protein Homology CDS 14695 17039 . - 0 ID=cds-YPIP275_RS21590;Parent=gene-YPIP275_RS21590;Note=frameshifted;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082331.1;locus_tag=YPIP275_RS21590;product=YgiQ family radical SAM protein;pseudo=true;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 17347 18771 . - . ID=gene-YPIP275_RS21595;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=YPIP275_RS21595;old_locus_tag=YPIP275_0090 NZ_AAOS02000032.1 Protein Homology CDS 17347 18771 . - 0 ID=cds-WP_002212176.1;Parent=gene-YPIP275_RS21595;Dbxref=GenBank:WP_002212176.1;Name=WP_002212176.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230599.1;locus_tag=YPIP275_RS21595;product=cell division protein FtsP;protein_id=WP_002212176.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 18950 19681 . - . ID=gene-YPIP275_RS21600;Name=YPIP275_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21600;old_locus_tag=YPIP275_0091 NZ_AAOS02000032.1 Protein Homology CDS 18950 19681 . - 0 ID=cds-WP_002212177.1;Parent=gene-YPIP275_RS21600;Dbxref=GenBank:WP_002212177.1;Name=WP_002212177.1;Ontology_term=GO:0008654,GO:0003841,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=1-acylglycerol-3-phosphate O-acyltransferase activity|0003841||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223690.1;locus_tag=YPIP275_RS21600;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_002212177.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 19970 22243 . - . ID=gene-YPIP275_RS21605;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=YPIP275_RS21605;old_locus_tag=YPIP275_0092 NZ_AAOS02000032.1 Protein Homology CDS 19970 22243 . - 0 ID=cds-WP_002212178.1;Parent=gene-YPIP275_RS21605;Dbxref=GenBank:WP_002212178.1;Name=WP_002212178.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906164.1;locus_tag=YPIP275_RS21605;product=DNA topoisomerase IV subunit A;protein_id=WP_002212178.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 22226 22474 . + . ID=gene-YPIP275_RS27930;Name=YPIP275_RS27930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27930 NZ_AAOS02000032.1 Protein Homology CDS 22226 22474 . + 0 ID=cds-WP_002216196.1;Parent=gene-YPIP275_RS27930;Dbxref=GenBank:WP_002216196.1;Name=WP_002216196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216196.1;locus_tag=YPIP275_RS27930;product=hypothetical protein;protein_id=WP_002216196.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 22547 23131 . + . ID=gene-YPIP275_RS21610;Name=YPIP275_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21610;old_locus_tag=YPIP275_0093 NZ_AAOS02000032.1 Protein Homology CDS 22547 23131 . + 0 ID=cds-WP_002212179.1;Parent=gene-YPIP275_RS21610;Dbxref=GenBank:WP_002212179.1;Name=WP_002212179.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303544.1;locus_tag=YPIP275_RS21610;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_002212179.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 23189 24100 . - . ID=gene-YPIP275_RS21615;Name=YPIP275_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21615;old_locus_tag=YPIP275_0094 NZ_AAOS02000032.1 Protein Homology CDS 23189 24100 . - 0 ID=cds-WP_002212180.1;Parent=gene-YPIP275_RS21615;Dbxref=GenBank:WP_002212180.1;Name=WP_002212180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212180.1;locus_tag=YPIP275_RS21615;product=LysR family transcriptional regulator;protein_id=WP_002212180.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 24104 25999 . - . ID=gene-YPIP275_RS21620;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=YPIP275_RS21620;old_locus_tag=YPIP275_0095 NZ_AAOS02000032.1 Protein Homology CDS 24104 25999 . - 0 ID=cds-WP_002212181.1;Parent=gene-YPIP275_RS21620;Dbxref=GenBank:WP_002212181.1;Name=WP_002212181.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257886.1;locus_tag=YPIP275_RS21620;product=DNA topoisomerase IV subunit B;protein_id=WP_002212181.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 26101 26682 . - . ID=gene-YPIP275_RS21625;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21625;old_locus_tag=YPIP275_0096 NZ_AAOS02000032.1 Protein Homology CDS 26101 26682 . - 0 ID=cds-WP_002212182.1;Parent=gene-YPIP275_RS21625;Dbxref=GenBank:WP_002212182.1;Name=WP_002212182.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212182.1;locus_tag=YPIP275_RS21625;product=esterase YqiA;protein_id=WP_002212182.1;transl_table=11 NZ_AAOS02000032.1 RefSeq pseudogene 26682 27507 . - . ID=gene-YPIP275_RS21630;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=pseudogene;locus_tag=YPIP275_RS21630;old_locus_tag=YPIP275_0097;pseudo=true NZ_AAOS02000032.1 Protein Homology CDS 26682 27507 . - 0 ID=cds-YPIP275_RS21630;Parent=gene-YPIP275_RS21630;Note=frameshifted;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005180337.1;locus_tag=YPIP275_RS21630;product=3'%2C5'-cyclic-AMP phosphodiesterase;pseudo=true;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 27589 28014 . - . ID=gene-YPIP275_RS21635;Name=YPIP275_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21635;old_locus_tag=YPIP275_0098 NZ_AAOS02000032.1 Protein Homology CDS 27589 28014 . - 0 ID=cds-WP_002212183.1;Parent=gene-YPIP275_RS21635;Dbxref=GenBank:WP_002212183.1;Name=WP_002212183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005188305.1;locus_tag=YPIP275_RS21635;product=DUF1249 family protein;protein_id=WP_002212183.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 28048 28680 . - . ID=gene-YPIP275_RS21640;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=YPIP275_RS21640;old_locus_tag=YPIP275_0099 NZ_AAOS02000032.1 Protein Homology CDS 28048 28680 . - 0 ID=cds-WP_002212184.1;Parent=gene-YPIP275_RS21640;Dbxref=GenBank:WP_002212184.1;Name=WP_002212184.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212184.1;locus_tag=YPIP275_RS21640;product=ADP-ribose diphosphatase;protein_id=WP_002212184.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 29076 30473 . + . ID=gene-YPIP275_RS21645;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=YPIP275_RS21645;old_locus_tag=YPIP275_0101 NZ_AAOS02000032.1 Protein Homology CDS 29076 30473 . + 0 ID=cds-WP_002212186.1;Parent=gene-YPIP275_RS21645;Dbxref=GenBank:WP_002212186.1;Name=WP_002212186.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212186.1;locus_tag=YPIP275_RS21645;product=outer membrane channel protein TolC;protein_id=WP_002212186.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 30777 31460 . + . ID=gene-YPIP275_RS21655;Name=YPIP275_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21655;old_locus_tag=YPIP275_0102 NZ_AAOS02000032.1 Protein Homology CDS 30777 31460 . + 0 ID=cds-WP_002357252.1;Parent=gene-YPIP275_RS21655;Dbxref=GenBank:WP_002357252.1;Name=WP_002357252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002357252.1;locus_tag=YPIP275_RS21655;product=DUF1190 family protein;protein_id=WP_002357252.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 31470 32630 . + . ID=gene-YPIP275_RS21660;Name=YPIP275_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21660;old_locus_tag=YPIP275_0103 NZ_AAOS02000032.1 Protein Homology CDS 31470 32630 . + 0 ID=cds-WP_002212188.1;Parent=gene-YPIP275_RS21660;Dbxref=GenBank:WP_002212188.1;Name=WP_002212188.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814624.1;locus_tag=YPIP275_RS21660;product=glutathionylspermidine synthase family protein;protein_id=WP_002212188.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 33037 33819 . - . ID=gene-YPIP275_RS21665;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=YPIP275_RS21665;old_locus_tag=YPIP275_0104 NZ_AAOS02000032.1 Protein Homology CDS 33037 33819 . - 0 ID=cds-WP_002212189.1;Parent=gene-YPIP275_RS21665;Dbxref=GenBank:WP_002212189.1;Name=WP_002212189.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212189.1;locus_tag=YPIP275_RS21665;product=4%2C5-DOPA-extradiol-dioxygenase;protein_id=WP_002212189.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 34278 34931 . - . ID=gene-YPIP275_RS21670;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=YPIP275_RS21670;old_locus_tag=YPIP275_0105 NZ_AAOS02000032.1 Protein Homology CDS 34278 34931 . - 0 ID=cds-WP_002212190.1;Parent=gene-YPIP275_RS21670;Dbxref=GenBank:WP_002212190.1;Name=WP_002212190.1;Ontology_term=GO:0009231,GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212190.1;locus_tag=YPIP275_RS21670;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_002212190.1;transl_table=11 NZ_AAOS02000032.1 cmsearch riboswitch 35173 35362 . - . ID=id-NZ_AAOS02000032.1:35173..35362;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_AAOS02000032.1 RefSeq gene 35500 35781 . + . ID=gene-YPIP275_RS21680;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=YPIP275_RS21680;old_locus_tag=YPIP275_0106 NZ_AAOS02000032.1 Protein Homology CDS 35500 35781 . + 0 ID=cds-WP_002212191.1;Parent=gene-YPIP275_RS21680;Dbxref=GenBank:WP_002212191.1;Name=WP_002212191.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212191.1;locus_tag=YPIP275_RS21680;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_002212191.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 35994 36137 . + . ID=gene-YPIP275_RS29285;Name=YPIP275_RS29285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29285 NZ_AAOS02000032.1 Protein Homology CDS 35994 36137 . + 0 ID=cds-WP_071525823.1;Parent=gene-YPIP275_RS29285;Dbxref=GenBank:WP_071525823.1;Name=WP_071525823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378124.1;locus_tag=YPIP275_RS29285;product=gluconate 5-dehydrogenase;protein_id=WP_071525823.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 36106 37356 . - . ID=gene-YPIP275_RS21685;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=YPIP275_RS21685;old_locus_tag=YPIP275_0107 NZ_AAOS02000032.1 Protein Homology CDS 36106 37356 . - 0 ID=cds-WP_002212192.1;Parent=gene-YPIP275_RS21685;Dbxref=GenBank:WP_002212192.1;Name=WP_002212192.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212192.1;locus_tag=YPIP275_RS21685;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_002212192.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 37393 38823 . - . ID=gene-YPIP275_RS21690;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=YPIP275_RS21690;old_locus_tag=YPIP275_0108 NZ_AAOS02000032.1 Protein Homology CDS 37393 38823 . - 0 ID=cds-WP_002212193.1;Parent=gene-YPIP275_RS21690;Dbxref=GenBank:WP_002212193.1;Name=WP_002212193.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082324.1;locus_tag=YPIP275_RS21690;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_002212193.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 38958 41813 . - . ID=gene-YPIP275_RS21695;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=YPIP275_RS21695;old_locus_tag=YPIP275_0109 NZ_AAOS02000032.1 Protein Homology CDS 38958 41813 . - 0 ID=cds-WP_002212194.1;Parent=gene-YPIP275_RS21695;Dbxref=GenBank:WP_002212194.1;Name=WP_002212194.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303540.1;locus_tag=YPIP275_RS21695;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_002212194.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 41984 43291 . - . ID=gene-YPIP275_RS21700;Name=YPIP275_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21700;old_locus_tag=YPIP275_0110 NZ_AAOS02000032.1 Protein Homology CDS 41984 43291 . - 0 ID=cds-WP_002212195.1;Parent=gene-YPIP275_RS21700;Dbxref=GenBank:WP_002212195.1;Name=WP_002212195.1;Ontology_term=GO:0046872,GO:0050355;gbkey=CDS;go_function=metal ion binding|0046872||IEA,inorganic triphosphate phosphatase activity|0050355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650449.1;locus_tag=YPIP275_RS21700;product=CYTH domain-containing protein;protein_id=WP_002212195.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 43595 44218 . + . ID=gene-YPIP275_RS21705;Name=YPIP275_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21705;old_locus_tag=YPIP275_0111 NZ_AAOS02000032.1 Protein Homology CDS 43595 44218 . + 0 ID=cds-WP_002212196.1;Parent=gene-YPIP275_RS21705;Dbxref=GenBank:WP_002212196.1;Name=WP_002212196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212196.1;locus_tag=YPIP275_RS21705;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_002212196.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 44378 45616 . + . ID=gene-YPIP275_RS21710;Name=YPIP275_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21710;old_locus_tag=YPIP275_0112 NZ_AAOS02000032.1 Protein Homology CDS 44378 45616 . + 0 ID=cds-WP_002212197.1;Parent=gene-YPIP275_RS21710;Dbxref=GenBank:WP_002212197.1;Name=WP_002212197.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212197.1;locus_tag=YPIP275_RS21710;product=multifunctional CCA addition/repair protein;protein_id=WP_002212197.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 45852 46670 . - . ID=gene-YPIP275_RS21715;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21715;old_locus_tag=YPIP275_0113 NZ_AAOS02000032.1 Protein Homology CDS 45852 46670 . - 0 ID=cds-WP_002212198.1;Parent=gene-YPIP275_RS21715;Dbxref=GenBank:WP_002212198.1;Name=WP_002212198.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704480.1;locus_tag=YPIP275_RS21715;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_002212198.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 46944 47303 . - . ID=gene-YPIP275_RS21720;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=YPIP275_RS21720;old_locus_tag=YPIP275_0114 NZ_AAOS02000032.1 Protein Homology CDS 46944 47303 . - 0 ID=cds-WP_002212199.1;Parent=gene-YPIP275_RS21720;Dbxref=GenBank:WP_002212199.1;Name=WP_002212199.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212199.1;locus_tag=YPIP275_RS21720;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_002212199.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 47411 48061 . + . ID=gene-YPIP275_RS21725;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=YPIP275_RS21725;old_locus_tag=YPIP275_0115 NZ_AAOS02000032.1 Protein Homology CDS 47411 48061 . + 0 ID=cds-WP_002217581.1;Parent=gene-YPIP275_RS21725;Dbxref=GenBank:WP_002217581.1;Name=WP_002217581.1;Ontology_term=GO:0006654,GO:0016747,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217581.1;locus_tag=YPIP275_RS21725;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_002217581.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 48307 49320 . - . ID=gene-YPIP275_RS21730;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=YPIP275_RS21730;old_locus_tag=YPIP275_0116 NZ_AAOS02000032.1 Protein Homology CDS 48307 49320 . - 0 ID=cds-WP_002212201.1;Parent=gene-YPIP275_RS21730;Dbxref=GenBank:WP_002212201.1;Name=WP_002212201.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212201.1;locus_tag=YPIP275_RS21730;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_002212201.1;transl_table=11 NZ_AAOS02000032.1 RefSeq gene 49459 49674 . - . ID=gene-YPIP275_RS28955;Name=YPIP275_RS28955;end_range=49674,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28955;partial=true NZ_AAOS02000032.1 GeneMarkS-2+ CDS 49459 49674 . - 0 ID=cds-WP_366534805.1;Parent=gene-YPIP275_RS28955;Dbxref=GenBank:WP_366534805.1;Name=WP_366534805.1;end_range=49674,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS28955;partial=true;product=hypothetical protein;protein_id=WP_366534805.1;transl_table=11 ##sequence-region NZ_AAOS02000031.1 1 52228 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000031.1 RefSeq region 1 52228 . + . ID=NZ_AAOS02000031.1:1..52228;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000031.1 RefSeq gene 150 226 . - . ID=gene-YPIP275_RS21245;Name=YPIP275_RS21245;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS21245;old_locus_tag=YPIP275_3940 NZ_AAOS02000031.1 tRNAscan-SE tRNA 150 226 . - . ID=rna-YPIP275_RS21245;Parent=gene-YPIP275_RS21245;anticodon=(pos:complement(190..192));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS21245;product=tRNA-Met NZ_AAOS02000031.1 tRNAscan-SE exon 150 226 . - . ID=exon-YPIP275_RS21245-1;Parent=rna-YPIP275_RS21245;anticodon=(pos:complement(190..192));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS21245;product=tRNA-Met NZ_AAOS02000031.1 RefSeq gene 442 1614 . + . ID=gene-YPIP275_RS21250;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21250;old_locus_tag=YPIP275_3941 NZ_AAOS02000031.1 Protein Homology CDS 442 1614 . + 0 ID=cds-WP_002228046.1;Parent=gene-YPIP275_RS21250;Dbxref=GenBank:WP_002228046.1;Name=WP_002228046.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228046.1;locus_tag=YPIP275_RS21250;product=murein transglycosylase A;protein_id=WP_002228046.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 1757 2584 . + . ID=gene-YPIP275_RS21255;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21255;old_locus_tag=YPIP275_3942 NZ_AAOS02000031.1 Protein Homology CDS 1757 2584 . + 0 ID=cds-WP_002212114.1;Parent=gene-YPIP275_RS21255;Dbxref=GenBank:WP_002212114.1;Name=WP_002212114.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104734.1;locus_tag=YPIP275_RS21255;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_002212114.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 2620 3063 . - . ID=gene-YPIP275_RS21260;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=YPIP275_RS21260;old_locus_tag=YPIP275_3943 NZ_AAOS02000031.1 Protein Homology CDS 2620 3063 . - 0 ID=cds-WP_002212115.1;Parent=gene-YPIP275_RS21260;Dbxref=GenBank:WP_002212115.1;Name=WP_002212115.1;Ontology_term=GO:0016226,GO:0031071;gbkey=CDS;gene=csdE;go_function=cysteine desulfurase activity|0031071||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212115.1;locus_tag=YPIP275_RS21260;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_002212115.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 3198 4403 . - . ID=gene-YPIP275_RS21265;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21265;old_locus_tag=YPIP275_3944 NZ_AAOS02000031.1 Protein Homology CDS 3198 4403 . - 0 ID=cds-WP_002212116.1;Parent=gene-YPIP275_RS21265;Dbxref=GenBank:WP_002212116.1;Name=WP_002212116.1;Ontology_term=GO:0016226,GO:0031071;gbkey=CDS;gene=csdA;go_function=cysteine desulfurase activity|0031071||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212116.1;locus_tag=YPIP275_RS21265;product=cysteine desulfurase CsdA;protein_id=WP_002212116.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 4480 4599 . + . ID=gene-YPIP275_RS27900;Name=YPIP275_RS27900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27900 NZ_AAOS02000031.1 Protein Homology CDS 4480 4599 . + 0 ID=cds-WP_002231328.1;Parent=gene-YPIP275_RS27900;Dbxref=GenBank:WP_002231328.1;Name=WP_002231328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231328.1;locus_tag=YPIP275_RS27900;product=DUF903 domain-containing protein;protein_id=WP_002231328.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 5063 5980 . + . ID=gene-YPIP275_RS21270;Name=YPIP275_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21270;old_locus_tag=YPIP275_3945 NZ_AAOS02000031.1 Protein Homology CDS 5063 5980 . + 0 ID=cds-WP_002212117.1;Parent=gene-YPIP275_RS21270;Dbxref=GenBank:WP_002212117.1;Name=WP_002212117.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391719.1;locus_tag=YPIP275_RS21270;product=transcriptional regulator GcvA;protein_id=WP_002212117.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 6146 6541 . + . ID=gene-YPIP275_RS21275;Name=YPIP275_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21275;old_locus_tag=YPIP275_3946 NZ_AAOS02000031.1 Protein Homology CDS 6146 6541 . + 0 ID=cds-WP_002212118.1;Parent=gene-YPIP275_RS21275;Dbxref=GenBank:WP_002212118.1;Name=WP_002212118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212118.1;locus_tag=YPIP275_RS21275;product=DUF423 domain-containing protein;protein_id=WP_002212118.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 6534 7640 . + . ID=gene-YPIP275_RS21280;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=YPIP275_RS21280;old_locus_tag=YPIP275_3947 NZ_AAOS02000031.1 Protein Homology CDS 6534 7640 . + 0 ID=cds-WP_002212119.1;Parent=gene-YPIP275_RS21280;Dbxref=GenBank:WP_002212119.1;Name=WP_002212119.1;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706716.1;locus_tag=YPIP275_RS21280;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_002212119.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 7891 8646 . - . ID=gene-YPIP275_RS21285;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=YPIP275_RS21285;old_locus_tag=YPIP275_3948 NZ_AAOS02000031.1 Protein Homology CDS 7891 8646 . - 0 ID=cds-WP_002215970.1;Parent=gene-YPIP275_RS21285;Dbxref=GenBank:WP_002215970.1;Name=WP_002215970.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192868.1;locus_tag=YPIP275_RS21285;product=flap endonuclease Xni;protein_id=WP_002215970.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 8906 10270 . - . ID=gene-YPIP275_RS21290;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=YPIP275_RS21290;old_locus_tag=YPIP275_3949 NZ_AAOS02000031.1 Protein Homology CDS 8906 10270 . - 0 ID=cds-WP_002212121.1;Parent=gene-YPIP275_RS21290;Dbxref=GenBank:WP_002212121.1;Name=WP_002212121.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=YPIP275_RS21290;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_002212121.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 10423 11268 . - . ID=gene-YPIP275_RS21295;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=YPIP275_RS21295;old_locus_tag=YPIP275_3950 NZ_AAOS02000031.1 Protein Homology CDS 10423 11268 . - 0 ID=cds-WP_002212122.1;Parent=gene-YPIP275_RS21295;Dbxref=GenBank:WP_002212122.1;Name=WP_002212122.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649376.1;locus_tag=YPIP275_RS21295;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_002212122.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 11400 11951 . + . ID=gene-YPIP275_RS21300;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=YPIP275_RS21300;old_locus_tag=YPIP275_3951 NZ_AAOS02000031.1 Protein Homology CDS 11400 11951 . + 0 ID=cds-WP_002212123.1;Parent=gene-YPIP275_RS21300;Dbxref=GenBank:WP_002212123.1;Name=WP_002212123.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706711.1;locus_tag=YPIP275_RS21300;product=SecY-interacting protein;protein_id=WP_002212123.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 12641 13099 . + . ID=gene-YPIP275_RS21305;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21305;old_locus_tag=YPIP275_3952 NZ_AAOS02000031.1 Protein Homology CDS 12641 13099 . + 0 ID=cds-WP_002213775.1-10;Parent=gene-YPIP275_RS21305;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS21305;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 13353 13685 . + . ID=gene-YPIP275_RS21310;Name=YPIP275_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21310;old_locus_tag=YPIP275_3953 NZ_AAOS02000031.1 Protein Homology CDS 13353 13685 . + 0 ID=cds-WP_002212124.1;Parent=gene-YPIP275_RS21310;Dbxref=GenBank:WP_002212124.1;Name=WP_002212124.1;Ontology_term=GO:0044010;gbkey=CDS;go_process=single-species biofilm formation|0044010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212124.1;locus_tag=YPIP275_RS21310;product=YqcC family protein;protein_id=WP_002212124.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 13685 14458 . + . ID=gene-YPIP275_RS21315;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=YPIP275_RS21315;old_locus_tag=YPIP275_3954 NZ_AAOS02000031.1 Protein Homology CDS 13685 14458 . + 0 ID=cds-WP_002212125.1;Parent=gene-YPIP275_RS21315;Dbxref=GenBank:WP_002212125.1;Name=WP_002212125.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212125.1;locus_tag=YPIP275_RS21315;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_002212125.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 14486 14935 . + . ID=gene-YPIP275_RS21320;Name=YPIP275_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21320;old_locus_tag=YPIP275_3955 NZ_AAOS02000031.1 Protein Homology CDS 14486 14935 . + 0 ID=cds-WP_002212126.1;Parent=gene-YPIP275_RS21320;Dbxref=GenBank:WP_002212126.1;Name=WP_002212126.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649378.1;locus_tag=YPIP275_RS21320;product=flavodoxin;protein_id=WP_002212126.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 15025 15414 . - . ID=gene-YPIP275_RS21325;Name=YPIP275_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21325;old_locus_tag=YPIP275_3956 NZ_AAOS02000031.1 Protein Homology CDS 15025 15414 . - 0 ID=cds-WP_002212127.1;Parent=gene-YPIP275_RS21325;Dbxref=GenBank:WP_002212127.1;Name=WP_002212127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318690.1;locus_tag=YPIP275_RS21325;product=DUF3461 family protein;protein_id=WP_002212127.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 15538 16362 . - . ID=gene-YPIP275_RS21330;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=YPIP275_RS21330;old_locus_tag=YPIP275_3957 NZ_AAOS02000031.1 Protein Homology CDS 15538 16362 . - 0 ID=cds-WP_002212128.1;Parent=gene-YPIP275_RS21330;Dbxref=GenBank:WP_002212128.1;Name=WP_002212128.1;Ontology_term=GO:0009085,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=YPIP275_RS21330;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_002212128.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 16537 19218 . - . ID=gene-YPIP275_RS21335;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=YPIP275_RS21335;old_locus_tag=YPIP275_3958 NZ_AAOS02000031.1 Protein Homology CDS 16537 19218 . - 0 ID=cds-WP_002212129.1;Parent=gene-YPIP275_RS21335;Dbxref=GenBank:WP_002212129.1;Name=WP_002212129.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192863.1;locus_tag=YPIP275_RS21335;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_002212129.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 19278 20069 . - . ID=gene-YPIP275_RS21340;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=YPIP275_RS21340;old_locus_tag=YPIP275_3959 NZ_AAOS02000031.1 Protein Homology CDS 19278 20069 . - 0 ID=cds-WP_002212130.1;Parent=gene-YPIP275_RS21340;Dbxref=GenBank:WP_002212130.1;Name=WP_002212130.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704362.1;locus_tag=YPIP275_RS21340;product=type I methionyl aminopeptidase;protein_id=WP_002212130.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 20504 21229 . + . ID=gene-YPIP275_RS21345;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=YPIP275_RS21345;old_locus_tag=YPIP275_3960 NZ_AAOS02000031.1 Protein Homology CDS 20504 21229 . + 0 ID=cds-WP_002221800.1;Parent=gene-YPIP275_RS21345;Dbxref=GenBank:WP_002221800.1;Name=WP_002221800.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=YPIP275_RS21345;product=30S ribosomal protein S2;protein_id=WP_002221800.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 21357 22214 . + . ID=gene-YPIP275_RS21350;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=YPIP275_RS21350;old_locus_tag=YPIP275_3961 NZ_AAOS02000031.1 Protein Homology CDS 21357 22214 . + 0 ID=cds-WP_002212132.1;Parent=gene-YPIP275_RS21350;Dbxref=GenBank:WP_002212132.1;Name=WP_002212132.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276101.1;locus_tag=YPIP275_RS21350;product=translation elongation factor Ts;protein_id=WP_002212132.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 22423 23148 . + . ID=gene-YPIP275_RS21355;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=YPIP275_RS21355;old_locus_tag=YPIP275_3962 NZ_AAOS02000031.1 Protein Homology CDS 22423 23148 . + 0 ID=cds-WP_002212133.1;Parent=gene-YPIP275_RS21355;Dbxref=GenBank:WP_002212133.1;Name=WP_002212133.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212133.1;locus_tag=YPIP275_RS21355;product=UMP kinase;protein_id=WP_002212133.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 23284 23841 . + . ID=gene-YPIP275_RS21360;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=YPIP275_RS21360;old_locus_tag=YPIP275_3963 NZ_AAOS02000031.1 Protein Homology CDS 23284 23841 . + 0 ID=cds-WP_002212134.1;Parent=gene-YPIP275_RS21360;Dbxref=GenBank:WP_002212134.1;Name=WP_002212134.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440641.1;locus_tag=YPIP275_RS21360;product=ribosome recycling factor;protein_id=WP_002212134.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 24055 25251 . + . ID=gene-YPIP275_RS21365;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=YPIP275_RS21365;old_locus_tag=YPIP275_3964 NZ_AAOS02000031.1 Protein Homology CDS 24055 25251 . + 0 ID=cds-WP_002212135.1;Parent=gene-YPIP275_RS21365;Dbxref=GenBank:WP_002212135.1;Name=WP_002212135.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082472.1;locus_tag=YPIP275_RS21365;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_002212135.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 25475 26233 . + . ID=gene-YPIP275_RS21370;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=YPIP275_RS21370;old_locus_tag=YPIP275_3965 NZ_AAOS02000031.1 Protein Homology CDS 25475 26233 . + 0 ID=cds-WP_002212136.1;Parent=gene-YPIP275_RS21370;Dbxref=GenBank:WP_002212136.1;Name=WP_002212136.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212136.1;locus_tag=YPIP275_RS21370;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_002212136.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 26243 27091 . + . ID=gene-YPIP275_RS21375;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21375;old_locus_tag=YPIP275_3966 NZ_AAOS02000031.1 Protein Homology CDS 26243 27091 . + 0 ID=cds-WP_002212137.1;Parent=gene-YPIP275_RS21375;Dbxref=GenBank:WP_002212137.1;Name=WP_002212137.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005173216.1;locus_tag=YPIP275_RS21375;product=phosphatidate cytidylyltransferase;protein_id=WP_002212137.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 27120 28475 . + . ID=gene-YPIP275_RS21380;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=YPIP275_RS21380;old_locus_tag=YPIP275_3967 NZ_AAOS02000031.1 Protein Homology CDS 27120 28475 . + 0 ID=cds-WP_002212138.1;Parent=gene-YPIP275_RS21380;Dbxref=GenBank:WP_002212138.1;Name=WP_002212138.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212138.1;locus_tag=YPIP275_RS21380;product=sigma E protease regulator RseP;protein_id=WP_002212138.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 28512 30899 . + . ID=gene-YPIP275_RS21385;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21385;old_locus_tag=YPIP275_3968 NZ_AAOS02000031.1 Protein Homology CDS 28512 30899 . + 0 ID=cds-WP_002212139.1;Parent=gene-YPIP275_RS21385;Dbxref=GenBank:WP_002212139.1;Name=WP_002212139.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078902.1;locus_tag=YPIP275_RS21385;product=outer membrane protein assembly factor BamA;protein_id=WP_002212139.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 31057 31554 . + . ID=gene-YPIP275_RS21390;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=YPIP275_RS21390;old_locus_tag=YPIP275_3969 NZ_AAOS02000031.1 Protein Homology CDS 31057 31554 . + 0 ID=cds-WP_002212140.1;Parent=gene-YPIP275_RS21390;Dbxref=GenBank:WP_002212140.1;Name=WP_002212140.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212140.1;locus_tag=YPIP275_RS21390;product=molecular chaperone Skp;protein_id=WP_002212140.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 31558 32580 . + . ID=gene-YPIP275_RS21395;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=YPIP275_RS21395;old_locus_tag=YPIP275_3970 NZ_AAOS02000031.1 Protein Homology CDS 31558 32580 . + 0 ID=cds-WP_002212141.1;Parent=gene-YPIP275_RS21395;Dbxref=GenBank:WP_002212141.1;Name=WP_002212141.1;Ontology_term=GO:0009245,GO:0016747;gbkey=CDS;gene=lpxD;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212141.1;locus_tag=YPIP275_RS21395;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_002212141.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 32738 33283 . + . ID=gene-YPIP275_RS21400;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=YPIP275_RS21400;old_locus_tag=YPIP275_3971 NZ_AAOS02000031.1 Protein Homology CDS 32738 33283 . + 0 ID=cds-WP_002212142.1;Parent=gene-YPIP275_RS21400;Dbxref=GenBank:WP_002212142.1;Name=WP_002212142.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005173178.1;locus_tag=YPIP275_RS21400;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_002212142.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 33287 34075 . + . ID=gene-YPIP275_RS21405;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21405;old_locus_tag=YPIP275_3972 NZ_AAOS02000031.1 Protein Homology CDS 33287 34075 . + 0 ID=cds-WP_002212143.1;Parent=gene-YPIP275_RS21405;Dbxref=GenBank:WP_002212143.1;Name=WP_002212143.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414723.1;locus_tag=YPIP275_RS21405;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_002212143.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 34079 35263 . + . ID=gene-YPIP275_RS21410;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=YPIP275_RS21410;old_locus_tag=YPIP275_3973 NZ_AAOS02000031.1 Protein Homology CDS 34079 35263 . + 0 ID=cds-WP_002212144.1;Parent=gene-YPIP275_RS21410;Dbxref=GenBank:WP_002212144.1;Name=WP_002212144.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016678507.1;locus_tag=YPIP275_RS21410;product=lipid-A-disaccharide synthase;protein_id=WP_002212144.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 35260 35856 . + . ID=gene-YPIP275_RS21415;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=YPIP275_RS21415;old_locus_tag=YPIP275_3974 NZ_AAOS02000031.1 Protein Homology CDS 35260 35856 . + 0 ID=cds-WP_002212145.1;Parent=gene-YPIP275_RS21415;Dbxref=GenBank:WP_002212145.1;Name=WP_002212145.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212145.1;locus_tag=YPIP275_RS21415;product=ribonuclease HII;protein_id=WP_002212145.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 36019 39501 . + . ID=gene-YPIP275_RS21420;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=YPIP275_RS21420;old_locus_tag=YPIP275_3975 NZ_AAOS02000031.1 Protein Homology CDS 36019 39501 . + 0 ID=cds-WP_002228634.1;Parent=gene-YPIP275_RS21420;Dbxref=GenBank:WP_002228634.1;Name=WP_002228634.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308213.1;locus_tag=YPIP275_RS21420;product=DNA polymerase III subunit alpha;protein_id=WP_002228634.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 39514 40473 . + . ID=gene-YPIP275_RS21425;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21425;old_locus_tag=YPIP275_3976 NZ_AAOS02000031.1 Protein Homology CDS 39514 40473 . + 0 ID=cds-WP_002212147.1;Parent=gene-YPIP275_RS21425;Dbxref=GenBank:WP_002212147.1;Name=WP_002212147.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455765.1;locus_tag=YPIP275_RS21425;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_002212147.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 40657 41055 . + . ID=gene-YPIP275_RS21430;Name=YPIP275_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21430;old_locus_tag=YPIP275_3977 NZ_AAOS02000031.1 Protein Homology CDS 40657 41055 . + 0 ID=cds-WP_002212148.1;Parent=gene-YPIP275_RS21430;Dbxref=GenBank:WP_002212148.1;Name=WP_002212148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212148.1;locus_tag=YPIP275_RS21430;product=VOC family protein;protein_id=WP_002212148.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 41057 42439 . + . ID=gene-YPIP275_RS21435;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=YPIP275_RS21435;old_locus_tag=YPIP275_3978 NZ_AAOS02000031.1 Protein Homology CDS 41057 42439 . + 0 ID=cds-WP_002212149.1;Parent=gene-YPIP275_RS21435;Dbxref=GenBank:WP_002212149.1;Name=WP_002212149.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212149.1;locus_tag=YPIP275_RS21435;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_002212149.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 42676 42993 . + . ID=gene-YPIP275_RS21440;Name=YPIP275_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21440;old_locus_tag=YPIP275_3979 NZ_AAOS02000031.1 Protein Homology CDS 42676 42993 . + 0 ID=cds-WP_002212150.1;Parent=gene-YPIP275_RS21440;Dbxref=GenBank:WP_002212150.1;Name=WP_002212150.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212150.1;locus_tag=YPIP275_RS21440;product=c-type cytochrome;protein_id=WP_002212150.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 43258 43518 . - . ID=gene-YPIP275_RS21445;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=YPIP275_RS21445;old_locus_tag=YPIP275_3980 NZ_AAOS02000031.1 Protein Homology CDS 43258 43518 . - 0 ID=cds-WP_002218374.1;Parent=gene-YPIP275_RS21445;Dbxref=GenBank:WP_002218374.1;Name=WP_002218374.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218374.1;locus_tag=YPIP275_RS21445;product=Rho-binding antiterminator;protein_id=WP_002218374.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 43505 43705 . - . ID=gene-YPIP275_RS21450;Name=YPIP275_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21450;old_locus_tag=YPIP275_3981 NZ_AAOS02000031.1 Protein Homology CDS 43505 43705 . - 0 ID=cds-WP_002212152.1;Parent=gene-YPIP275_RS21450;Dbxref=GenBank:WP_002212152.1;Name=WP_002212152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146467.1;locus_tag=YPIP275_RS21450;product=YaeP family protein;protein_id=WP_002212152.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 43947 44495 . + . ID=gene-YPIP275_RS21455;Name=YPIP275_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21455;old_locus_tag=YPIP275_3982 NZ_AAOS02000031.1 Protein Homology CDS 43947 44495 . + 0 ID=cds-WP_002212153.1;Parent=gene-YPIP275_RS21455;Dbxref=GenBank:WP_002212153.1;Name=WP_002212153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212153.1;locus_tag=YPIP275_RS21455;product=YaeQ family protein;protein_id=WP_002212153.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 44498 44914 . + . ID=gene-YPIP275_RS21460;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=YPIP275_RS21460;old_locus_tag=YPIP275_3983 NZ_AAOS02000031.1 Protein Homology CDS 44498 44914 . + 0 ID=cds-WP_002212154.1;Parent=gene-YPIP275_RS21460;Dbxref=GenBank:WP_002212154.1;Name=WP_002212154.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704311.1;locus_tag=YPIP275_RS21460;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_002212154.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 44999 45682 . + . ID=gene-YPIP275_RS21465;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=YPIP275_RS21465;old_locus_tag=YPIP275_3984 NZ_AAOS02000031.1 Protein Homology CDS 44999 45682 . + 0 ID=cds-WP_002212155.1;Parent=gene-YPIP275_RS21465;Dbxref=GenBank:WP_002212155.1;Name=WP_002212155.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906277.1;locus_tag=YPIP275_RS21465;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_002212155.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 45816 47534 . - . ID=gene-YPIP275_RS21470;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=YPIP275_RS21470;old_locus_tag=YPIP275_3985 NZ_AAOS02000031.1 Protein Homology CDS 45816 47534 . - 0 ID=cds-WP_002212156.1;Parent=gene-YPIP275_RS21470;Dbxref=GenBank:WP_002212156.1;Name=WP_002212156.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163997.1;locus_tag=YPIP275_RS21470;product=proline--tRNA ligase;protein_id=WP_002212156.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 47638 48345 . - . ID=gene-YPIP275_RS21475;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21475;old_locus_tag=YPIP275_3986 NZ_AAOS02000031.1 Protein Homology CDS 47638 48345 . - 0 ID=cds-WP_002212157.1;Parent=gene-YPIP275_RS21475;Dbxref=GenBank:WP_002212157.1;Name=WP_002212157.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212157.1;locus_tag=YPIP275_RS21475;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_002212157.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 48342 48749 . - . ID=gene-YPIP275_RS21480;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=YPIP275_RS21480;old_locus_tag=YPIP275_3987 NZ_AAOS02000031.1 Protein Homology CDS 48342 48749 . - 0 ID=cds-WP_002212158.1;Parent=gene-YPIP275_RS21480;Dbxref=GenBank:WP_002212158.1;Name=WP_002212158.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212158.1;locus_tag=YPIP275_RS21480;product=envelope stress sensor lipoprotein RcsF;protein_id=WP_002212158.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 48867 49682 . - . ID=gene-YPIP275_RS21485;Name=YPIP275_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21485;old_locus_tag=YPIP275_3988 NZ_AAOS02000031.1 Protein Homology CDS 48867 49682 . - 0 ID=cds-WP_002212159.1;Parent=gene-YPIP275_RS21485;Dbxref=GenBank:WP_002212159.1;Name=WP_002212159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016534993.1;locus_tag=YPIP275_RS21485;product=MetQ/NlpA family lipoprotein;protein_id=WP_002212159.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 49746 50399 . - . ID=gene-YPIP275_RS21490;Name=YPIP275_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21490;old_locus_tag=YPIP275_3989 NZ_AAOS02000031.1 Protein Homology CDS 49746 50399 . - 0 ID=cds-WP_002212160.1;Parent=gene-YPIP275_RS21490;Dbxref=GenBank:WP_002212160.1;Name=WP_002212160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=YPIP275_RS21490;product=methionine ABC transporter permease MetI;protein_id=WP_002212160.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 50392 51423 . - . ID=gene-YPIP275_RS21495;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=YPIP275_RS21495;old_locus_tag=YPIP275_3990 NZ_AAOS02000031.1 Protein Homology CDS 50392 51423 . - 0 ID=cds-WP_002212161.1;Parent=gene-YPIP275_RS21495;Dbxref=GenBank:WP_002212161.1;Name=WP_002212161.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308228.1;locus_tag=YPIP275_RS21495;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_002212161.1;transl_table=11 NZ_AAOS02000031.1 RefSeq gene 51610 52176 . + . ID=gene-YPIP275_RS21500;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=YPIP275_RS21500;old_locus_tag=YPIP275_3991 NZ_AAOS02000031.1 Protein Homology CDS 51610 52176 . + 0 ID=cds-WP_002220062.1;Parent=gene-YPIP275_RS21500;Dbxref=GenBank:WP_002220062.1;Name=WP_002220062.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683885.1;locus_tag=YPIP275_RS21500;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_002220062.1;transl_table=11 ##sequence-region NZ_AAOS02000030.1 1 57193 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000030.1 RefSeq region 1 57193 . + . ID=NZ_AAOS02000030.1:1..57193;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000030.1 RefSeq gene 1 577 . + . ID=gene-YPIP275_RS21015;Name=YPIP275_RS21015;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPIP275_RS21015;partial=true;start_range=.,1 NZ_AAOS02000030.1 cmsearch rRNA 1 577 . + . ID=rna-YPIP275_RS21015;Parent=gene-YPIP275_RS21015;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS21015;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_AAOS02000030.1 cmsearch exon 1 577 . + . ID=exon-YPIP275_RS21015-1;Parent=rna-YPIP275_RS21015;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS21015;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_AAOS02000030.1 RefSeq gene 687 802 . + . ID=gene-YPIP275_RS21020;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=YPIP275_RS21020;old_locus_tag=YPIP275_3866 NZ_AAOS02000030.1 cmsearch rRNA 687 802 . + . ID=rna-YPIP275_RS21020;Parent=gene-YPIP275_RS21020;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS21020;product=5S ribosomal RNA NZ_AAOS02000030.1 cmsearch exon 687 802 . + . ID=exon-YPIP275_RS21020-1;Parent=rna-YPIP275_RS21020;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS21020;product=5S ribosomal RNA NZ_AAOS02000030.1 RefSeq gene 818 893 . + . ID=gene-YPIP275_RS21025;Name=YPIP275_RS21025;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS21025;old_locus_tag=YPIP275_3867 NZ_AAOS02000030.1 tRNAscan-SE tRNA 818 893 . + . ID=rna-YPIP275_RS21025;Parent=gene-YPIP275_RS21025;anticodon=(pos:851..853);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS21025;product=tRNA-Thr NZ_AAOS02000030.1 tRNAscan-SE exon 818 893 . + . ID=exon-YPIP275_RS21025-1;Parent=rna-YPIP275_RS21025;anticodon=(pos:851..853);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS21025;product=tRNA-Thr NZ_AAOS02000030.1 RefSeq gene 934 1049 . + . ID=gene-YPIP275_RS21030;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=YPIP275_RS21030;old_locus_tag=YPIP275_3868 NZ_AAOS02000030.1 cmsearch rRNA 934 1049 . + . ID=rna-YPIP275_RS21030;Parent=gene-YPIP275_RS21030;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS21030;product=5S ribosomal RNA NZ_AAOS02000030.1 cmsearch exon 934 1049 . + . ID=exon-YPIP275_RS21030-1;Parent=rna-YPIP275_RS21030;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS21030;product=5S ribosomal RNA NZ_AAOS02000030.1 RefSeq gene 1789 2718 . + . ID=gene-YPIP275_RS21040;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21040;old_locus_tag=YPIP275_3869 NZ_AAOS02000030.1 Protein Homology CDS 1789 2718 . + 0 ID=cds-WP_002212076.1;Parent=gene-YPIP275_RS21040;Dbxref=GenBank:WP_002212076.1;Name=WP_002212076.1;Ontology_term=GO:0071266,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process='de novo' L-methionine biosynthetic process|0071266||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312958.1;locus_tag=YPIP275_RS21040;product=homoserine O-acetyltransferase MetA;protein_id=WP_002212076.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 3139 4737 . + . ID=gene-YPIP275_RS21045;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=YPIP275_RS21045;old_locus_tag=YPIP275_3871 NZ_AAOS02000030.1 Protein Homology CDS 3139 4737 . + 0 ID=cds-WP_002212077.1;Parent=gene-YPIP275_RS21045;Dbxref=GenBank:WP_002212077.1;Name=WP_002212077.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212077.1;locus_tag=YPIP275_RS21045;product=malate synthase A;protein_id=WP_002212077.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 4784 6091 . + . ID=gene-YPIP275_RS21050;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21050;old_locus_tag=YPIP275_3872 NZ_AAOS02000030.1 Protein Homology CDS 4784 6091 . + 0 ID=cds-WP_002212078.1;Parent=gene-YPIP275_RS21050;Dbxref=GenBank:WP_002212078.1;Name=WP_002212078.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009111237.1;locus_tag=YPIP275_RS21050;product=isocitrate lyase;protein_id=WP_002212078.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 6347 8074 . + . ID=gene-YPIP275_RS21055;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=YPIP275_RS21055;old_locus_tag=YPIP275_3873 NZ_AAOS02000030.1 Protein Homology CDS 6347 8074 . + 0 ID=cds-WP_002212079.1;Parent=gene-YPIP275_RS21055;Dbxref=GenBank:WP_002212079.1;Name=WP_002212079.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212079.1;locus_tag=YPIP275_RS21055;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_002212079.1;transl_table=11 NZ_AAOS02000030.1 RefSeq pseudogene 8194 9038 . - . ID=gene-YPIP275_RS27895;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=pseudogene;locus_tag=YPIP275_RS27895;old_locus_tag=YPIP275_3874;pseudo=true NZ_AAOS02000030.1 Protein Homology CDS 8194 9038 . - 0 ID=cds-YPIP275_RS27895;Parent=gene-YPIP275_RS27895;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230619.1;locus_tag=YPIP275_RS27895;product=glyoxylate bypass operon transcriptional repressor IclR;pseudo=true;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 9253 12948 . + . ID=gene-YPIP275_RS21070;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=YPIP275_RS21070;old_locus_tag=YPIP275_3875 NZ_AAOS02000030.1 Protein Homology CDS 9253 12948 . + 0 ID=cds-WP_002212080.1;Parent=gene-YPIP275_RS21070;Dbxref=GenBank:WP_002212080.1;Name=WP_002212080.1;Ontology_term=GO:0071265,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906136.1;locus_tag=YPIP275_RS21070;product=methionine synthase;protein_id=WP_002212080.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 13044 17951 . - . ID=gene-YPIP275_RS21075;Name=YPIP275_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21075;old_locus_tag=YPIP275_3876 NZ_AAOS02000030.1 Protein Homology CDS 13044 17951 . - 0 ID=cds-WP_002212081.1;Parent=gene-YPIP275_RS21075;Dbxref=GenBank:WP_002212081.1;Name=WP_002212081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212081.1;locus_tag=YPIP275_RS21075;product=hemagglutinin repeat-containing protein;protein_id=WP_002212081.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 18021 19706 . - . ID=gene-YPIP275_RS21080;Name=YPIP275_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21080;old_locus_tag=YPIP275_3877 NZ_AAOS02000030.1 Protein Homology CDS 18021 19706 . - 0 ID=cds-WP_002228189.1;Parent=gene-YPIP275_RS21080;Dbxref=GenBank:WP_002228189.1;Name=WP_002228189.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002360998.1;locus_tag=YPIP275_RS21080;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_002228189.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 20274 21659 . - . ID=gene-YPIP275_RS21085;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=YPIP275_RS21085;old_locus_tag=YPIP275_3879 NZ_AAOS02000030.1 Protein Homology CDS 20274 21659 . - 0 ID=cds-WP_002212084.1;Parent=gene-YPIP275_RS21085;Dbxref=GenBank:WP_002212084.1;Name=WP_002212084.1;Ontology_term=GO:0009085,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016258117.1;locus_tag=YPIP275_RS21085;product=lysine-sensitive aspartokinase 3;protein_id=WP_002212084.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 22029 23675 . + . ID=gene-YPIP275_RS21090;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=YPIP275_RS21090;old_locus_tag=YPIP275_3880 NZ_AAOS02000030.1 Protein Homology CDS 22029 23675 . + 0 ID=cds-WP_002212085.1;Parent=gene-YPIP275_RS21090;Dbxref=GenBank:WP_002212085.1;Name=WP_002212085.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004705333.1;locus_tag=YPIP275_RS21090;product=glucose-6-phosphate isomerase;protein_id=WP_002212085.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 23810 24217 . + . ID=gene-YPIP275_RS21095;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=YPIP275_RS21095;old_locus_tag=YPIP275_3881 NZ_AAOS02000030.1 Protein Homology CDS 23810 24217 . + 0 ID=cds-WP_002212086.1;Parent=gene-YPIP275_RS21095;Dbxref=GenBank:WP_002212086.1;Name=WP_002212086.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004705335.1;locus_tag=YPIP275_RS21095;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_002212086.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 24360 25250 . - . ID=gene-YPIP275_RS21100;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=YPIP275_RS21100;old_locus_tag=YPIP275_3882 NZ_AAOS02000030.1 Protein Homology CDS 24360 25250 . - 0 ID=cds-WP_002212087.1;Parent=gene-YPIP275_RS21100;Dbxref=GenBank:WP_002212087.1;Name=WP_002212087.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224556.1;locus_tag=YPIP275_RS21100;product=maltose ABC transporter permease MalG;protein_id=WP_002212087.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 25264 26841 . - . ID=gene-YPIP275_RS21105;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=YPIP275_RS21105;old_locus_tag=YPIP275_3883 NZ_AAOS02000030.1 Protein Homology CDS 25264 26841 . - 0 ID=cds-WP_002212088.1;Parent=gene-YPIP275_RS21105;Dbxref=GenBank:WP_002212088.1;Name=WP_002212088.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715839.1;locus_tag=YPIP275_RS21105;product=maltose ABC transporter permease MalF;protein_id=WP_002212088.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 27028 28239 . - . ID=gene-YPIP275_RS21110;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=YPIP275_RS21110;old_locus_tag=YPIP275_3884 NZ_AAOS02000030.1 Protein Homology CDS 27028 28239 . - 0 ID=cds-WP_002212089.1;Parent=gene-YPIP275_RS21110;Dbxref=GenBank:WP_002212089.1;Name=WP_002212089.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906139.1;locus_tag=YPIP275_RS21110;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_002212089.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 28801 29037 . + . ID=gene-YPIP275_RS21115;Name=YPIP275_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21115 NZ_AAOS02000030.1 Protein Homology CDS 28801 29037 . + 0 ID=cds-WP_002221973.1;Parent=gene-YPIP275_RS21115;Dbxref=GenBank:WP_002221973.1;Name=WP_002221973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221973.1;locus_tag=YPIP275_RS21115;product=hypothetical protein;protein_id=WP_002221973.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 29041 30150 . + . ID=gene-YPIP275_RS21120;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=YPIP275_RS21120;old_locus_tag=YPIP275_3886 NZ_AAOS02000030.1 Protein Homology CDS 29041 30150 . + 0 ID=cds-WP_002212091.1;Parent=gene-YPIP275_RS21120;Dbxref=GenBank:WP_002212091.1;Name=WP_002212091.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313045.1;locus_tag=YPIP275_RS21120;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_002212091.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 30218 31492 . + . ID=gene-YPIP275_RS21125;Name=YPIP275_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21125;old_locus_tag=YPIP275_3887 NZ_AAOS02000030.1 Protein Homology CDS 30218 31492 . + 0 ID=cds-WP_474775110.1;Parent=gene-YPIP275_RS21125;Dbxref=GenBank:WP_474775110.1;Name=WP_474775110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224560.1;locus_tag=YPIP275_RS21125;product=maltoporin;protein_id=WP_474775110.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 31733 32644 . + . ID=gene-YPIP275_RS21130;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=YPIP275_RS21130;old_locus_tag=YPIP275_3888 NZ_AAOS02000030.1 Protein Homology CDS 31733 32644 . + 0 ID=cds-WP_002212093.1;Parent=gene-YPIP275_RS21130;Dbxref=GenBank:WP_002212093.1;Name=WP_002212093.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080119.1;locus_tag=YPIP275_RS21130;product=maltose operon protein MalM;protein_id=WP_002212093.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 33115 33393 . + . ID=gene-YPIP275_RS21135;Name=YPIP275_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21135;old_locus_tag=YPIP275_3891 NZ_AAOS02000030.1 Protein Homology CDS 33115 33393 . + 0 ID=cds-WP_002212095.1;Parent=gene-YPIP275_RS21135;Dbxref=GenBank:WP_002212095.1;Name=WP_002212095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193204.1;locus_tag=YPIP275_RS21135;product=hypothetical protein;protein_id=WP_002212095.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 33545 34063 . - . ID=gene-YPIP275_RS21140;Name=YPIP275_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21140;old_locus_tag=YPIP275_3892 NZ_AAOS02000030.1 Protein Homology CDS 33545 34063 . - 0 ID=cds-WP_002212097.1;Parent=gene-YPIP275_RS21140;Dbxref=GenBank:WP_002212097.1;Name=WP_002212097.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308261.1;locus_tag=YPIP275_RS21140;product=Hcp family type VI secretion system effector;protein_id=WP_002212097.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 34587 35084 . + . ID=gene-YPIP275_RS21145;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=YPIP275_RS21145;old_locus_tag=YPIP275_3893 NZ_AAOS02000030.1 Protein Homology CDS 34587 35084 . + 0 ID=cds-WP_002212098.1;Parent=gene-YPIP275_RS21145;Dbxref=GenBank:WP_002212098.1;Name=WP_002212098.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193202.1;locus_tag=YPIP275_RS21145;product=type VI secretion system contractile sheath small subunit;protein_id=WP_002212098.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 35152 36633 . + . ID=gene-YPIP275_RS21150;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=YPIP275_RS21150;old_locus_tag=YPIP275_3894 NZ_AAOS02000030.1 Protein Homology CDS 35152 36633 . + 0 ID=cds-WP_002212099.1;Parent=gene-YPIP275_RS21150;Dbxref=GenBank:WP_002212099.1;Name=WP_002212099.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212099.1;locus_tag=YPIP275_RS21150;product=type VI secretion system contractile sheath large subunit;protein_id=WP_002212099.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 36640 37080 . + . ID=gene-YPIP275_RS21155;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=YPIP275_RS21155;old_locus_tag=YPIP275_3895 NZ_AAOS02000030.1 Protein Homology CDS 36640 37080 . + 0 ID=cds-WP_002212100.1;Parent=gene-YPIP275_RS21155;Dbxref=GenBank:WP_002212100.1;Name=WP_002212100.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212100.1;locus_tag=YPIP275_RS21155;product=type VI secretion system baseplate subunit TssE;protein_id=WP_002212100.1;transl_table=11 NZ_AAOS02000030.1 RefSeq pseudogene 37080 38153 . + . ID=gene-YPIP275_RS21160;Name=tssF;end_range=38153,.;gbkey=Gene;gene=tssF;gene_biotype=pseudogene;locus_tag=YPIP275_RS21160;partial=true;pseudo=true NZ_AAOS02000030.1 Protein Homology CDS 37080 38153 . + 0 ID=cds-YPIP275_RS21160;Parent=gene-YPIP275_RS21160;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0033103;end_range=38153,.;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144758.1;locus_tag=YPIP275_RS21160;partial=true;product=type VI secretion system baseplate subunit TssF;pseudo=true;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 38196 39550 . - . ID=gene-YPIP275_RS28945;Name=YPIP275_RS28945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28945 NZ_AAOS02000030.1 Protein Homology CDS 39100 39550 . - 0 ID=cds-WP_100067904.1;Parent=gene-YPIP275_RS28945;Dbxref=GenBank:WP_100067904.1;Name=WP_100067904.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558220.1;locus_tag=YPIP275_RS28945;product=IS3-like element IS1661 family transposase;protein_id=WP_100067904.1;transl_table=11 NZ_AAOS02000030.1 Protein Homology CDS 38196 39100 . - 2 ID=cds-WP_100067904.1;Parent=gene-YPIP275_RS28945;Dbxref=GenBank:WP_100067904.1;Name=WP_100067904.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558220.1;locus_tag=YPIP275_RS28945;product=IS3-like element IS1661 family transposase;protein_id=WP_100067904.1;transl_table=11 NZ_AAOS02000030.1 RefSeq pseudogene 39607 40344 . + . ID=gene-YPIP275_RS21175;Name=YPIP275_RS21175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS21175;old_locus_tag=YPIP275_3898;partial=true;pseudo=true;start_range=.,39607 NZ_AAOS02000030.1 Protein Homology CDS 39607 40344 . + 0 ID=cds-YPIP275_RS21175;Parent=gene-YPIP275_RS21175;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015841407.1;locus_tag=YPIP275_RS21175;partial=true;product=type VI secretion system baseplate subunit TssF;pseudo=true;start_range=.,39607;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 40308 41396 . + . ID=gene-YPIP275_RS21180;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=YPIP275_RS21180;old_locus_tag=YPIP275_3899 NZ_AAOS02000030.1 Protein Homology CDS 40308 41396 . + 0 ID=cds-WP_002213885.1;Parent=gene-YPIP275_RS21180;Dbxref=GenBank:WP_002213885.1;Name=WP_002213885.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213885.1;locus_tag=YPIP275_RS21180;product=type VI secretion system baseplate subunit TssG;protein_id=WP_002213885.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 41522 42838 . + . ID=gene-YPIP275_RS21185;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=YPIP275_RS21185;old_locus_tag=YPIP275_3900 NZ_AAOS02000030.1 Protein Homology CDS 41522 42838 . + 0 ID=cds-WP_002212103.1;Parent=gene-YPIP275_RS21185;Dbxref=GenBank:WP_002212103.1;Name=WP_002212103.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tagH;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303452.1;locus_tag=YPIP275_RS21185;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WP_002212103.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 42838 43383 . + . ID=gene-YPIP275_RS21190;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS21190;old_locus_tag=YPIP275_3901 NZ_AAOS02000030.1 Protein Homology CDS 42838 43383 . + 0 ID=cds-WP_002212104.1;Parent=gene-YPIP275_RS21190;Dbxref=GenBank:WP_002212104.1;Name=WP_002212104.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104358.1;locus_tag=YPIP275_RS21190;product=type VI secretion system lipoprotein TssJ;protein_id=WP_002212104.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 43386 44732 . + . ID=gene-YPIP275_RS21195;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=YPIP275_RS21195;old_locus_tag=YPIP275_3902 NZ_AAOS02000030.1 Protein Homology CDS 43386 44732 . + 0 ID=cds-WP_002212105.1;Parent=gene-YPIP275_RS21195;Dbxref=GenBank:WP_002212105.1;Name=WP_002212105.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704536.1;locus_tag=YPIP275_RS21195;product=type VI secretion system baseplate subunit TssK;protein_id=WP_002212105.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 44732 45499 . + . ID=gene-YPIP275_RS21200;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=YPIP275_RS21200;old_locus_tag=YPIP275_3903 NZ_AAOS02000030.1 Protein Homology CDS 44732 45499 . + 0 ID=cds-WP_002212106.1;Parent=gene-YPIP275_RS21200;Dbxref=GenBank:WP_002212106.1;Name=WP_002212106.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212106.1;locus_tag=YPIP275_RS21200;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_002212106.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 45510 48113 . + . ID=gene-YPIP275_RS21205;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=YPIP275_RS21205;old_locus_tag=YPIP275_3904 NZ_AAOS02000030.1 Protein Homology CDS 45510 48113 . + 0 ID=cds-WP_002212107.1;Parent=gene-YPIP275_RS21205;Dbxref=GenBank:WP_002212107.1;Name=WP_002212107.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303453.1;locus_tag=YPIP275_RS21205;product=type VI secretion system ATPase TssH;protein_id=WP_002212107.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 48110 48907 . + . ID=gene-YPIP275_RS21210;Name=YPIP275_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21210;old_locus_tag=YPIP275_3905 NZ_AAOS02000030.1 Protein Homology CDS 48110 48907 . + 0 ID=cds-WP_002212108.1;Parent=gene-YPIP275_RS21210;Dbxref=GenBank:WP_002212108.1;Name=WP_002212108.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212108.1;locus_tag=YPIP275_RS21210;product=helix-turn-helix domain-containing protein;protein_id=WP_002212108.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 48904 49590 . + . ID=gene-YPIP275_RS21215;Name=vasI;gbkey=Gene;gene=vasI;gene_biotype=protein_coding;locus_tag=YPIP275_RS21215;old_locus_tag=YPIP275_3906 NZ_AAOS02000030.1 Protein Homology CDS 48904 49590 . + 0 ID=cds-WP_002212109.1;Parent=gene-YPIP275_RS21215;Dbxref=GenBank:WP_002212109.1;Name=WP_002212109.1;gbkey=CDS;gene=vasI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303454.1;locus_tag=YPIP275_RS21215;product=type VI secretion system-associated protein VasI;protein_id=WP_002212109.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 49596 50984 . + . ID=gene-YPIP275_RS21220;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=YPIP275_RS21220;old_locus_tag=YPIP275_3907 NZ_AAOS02000030.1 Protein Homology CDS 49596 50984 . + 0 ID=cds-WP_002212110.1;Parent=gene-YPIP275_RS21220;Dbxref=GenBank:WP_002212110.1;Name=WP_002212110.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212110.1;locus_tag=YPIP275_RS21220;product=type VI secretion system protein TssA;protein_id=WP_002212110.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 51016 54549 . + . ID=gene-YPIP275_RS21225;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=YPIP275_RS21225;old_locus_tag=YPIP275_3908 NZ_AAOS02000030.1 Protein Homology CDS 51016 54549 . + 0 ID=cds-WP_002212111.1;Parent=gene-YPIP275_RS21225;Dbxref=GenBank:WP_002212111.1;Name=WP_002212111.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414068.1;locus_tag=YPIP275_RS21225;product=type VI secretion system membrane subunit TssM;protein_id=WP_002212111.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 54674 55456 . + . ID=gene-YPIP275_RS21230;Name=YPIP275_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21230 NZ_AAOS02000030.1 Protein Homology CDS 54674 55456 . + 0 ID=cds-WP_002213880.1;Parent=gene-YPIP275_RS21230;Dbxref=GenBank:WP_002213880.1;Name=WP_002213880.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018516.7;locus_tag=YPIP275_RS21230;product=type VI secretion system ImpA family N-terminal domain-containing protein;protein_id=WP_002213880.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 55405 55986 . + . ID=gene-YPIP275_RS21235;Name=YPIP275_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21235 NZ_AAOS02000030.1 Protein Homology CDS 55405 55986 . + 0 ID=cds-WP_226984125.1;Parent=gene-YPIP275_RS21235;Dbxref=GenBank:WP_226984125.1;Name=WP_226984125.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023902.6;locus_tag=YPIP275_RS21235;product=VasL domain-containing protein;protein_id=WP_226984125.1;transl_table=11 NZ_AAOS02000030.1 RefSeq gene 56008 57193 . + . ID=gene-YPIP275_RS21240;Name=vgrG;end_range=57193,.;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=YPIP275_RS21240;old_locus_tag=YPIP275_3910;partial=true NZ_AAOS02000030.1 Protein Homology CDS 56008 57193 . + 0 ID=cds-WP_002212112.1;Parent=gene-YPIP275_RS21240;Dbxref=GenBank:WP_002212112.1;Name=WP_002212112.1;end_range=57193,.;gbkey=CDS;gene=vgrG;inference=COORDINATES: protein motif:HMM:TIGR03361.1;locus_tag=YPIP275_RS21240;partial=true;product=type VI secretion system tip protein VgrG;protein_id=WP_002212112.1;transl_table=11 ##sequence-region NZ_AAOS02000029.1 1 60902 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000029.1 RefSeq region 1 60902 . + . ID=NZ_AAOS02000029.1:1..60902;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000029.1 RefSeq gene 1 875 . - . ID=gene-YPIP275_RS20775;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS20775;old_locus_tag=YPIP275_3016;partial=true;start_range=.,1 NZ_AAOS02000029.1 Protein Homology CDS 1 875 . - 0 ID=cds-WP_002212025.1;Parent=gene-YPIP275_RS20775;Dbxref=GenBank:WP_002212025.1;Name=WP_002212025.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS20775;partial=true;product=IS21-like element IS100 family transposase;protein_id=WP_002212025.1;start_range=.,1;transl_table=11 NZ_AAOS02000029.1 RefSeq pseudogene 961 1836 . - . ID=gene-YPIP275_RS20780;Name=YPIP275_RS20780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS20780;old_locus_tag=YPIP275_3017;partial=true;pseudo=true;start_range=.,961 NZ_AAOS02000029.1 Protein Homology CDS 961 1836 . - 0 ID=cds-YPIP275_RS20780;Parent=gene-YPIP275_RS20780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0034220,GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230843.1;locus_tag=YPIP275_RS20780;partial=true;product=porin;pseudo=true;start_range=.,961;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 2572 3564 . - . ID=gene-YPIP275_RS20785;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=YPIP275_RS20785;old_locus_tag=YPIP275_3019 NZ_AAOS02000029.1 Protein Homology CDS 2572 3564 . - 0 ID=cds-WP_002212028.1;Parent=gene-YPIP275_RS20785;Dbxref=GenBank:WP_002212028.1;Name=WP_002212028.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212028.1;locus_tag=YPIP275_RS20785;product=succinylglutamate desuccinylase;protein_id=WP_002212028.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 3625 4968 . - . ID=gene-YPIP275_RS20790;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=YPIP275_RS20790;old_locus_tag=YPIP275_3020 NZ_AAOS02000029.1 Protein Homology CDS 3625 4968 . - 0 ID=cds-WP_002212029.1;Parent=gene-YPIP275_RS20790;Dbxref=GenBank:WP_002212029.1;Name=WP_002212029.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105170.1;locus_tag=YPIP275_RS20790;product=N-succinylarginine dihydrolase;protein_id=WP_002212029.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 4992 6509 . - . ID=gene-YPIP275_RS20795;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=YPIP275_RS20795;old_locus_tag=YPIP275_3021 NZ_AAOS02000029.1 Protein Homology CDS 4992 6509 . - 0 ID=cds-WP_002212030.1;Parent=gene-YPIP275_RS20795;Dbxref=GenBank:WP_002212030.1;Name=WP_002212030.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906226.1;locus_tag=YPIP275_RS20795;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_002212030.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 6506 7558 . - . ID=gene-YPIP275_RS20800;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=YPIP275_RS20800;old_locus_tag=YPIP275_3022 NZ_AAOS02000029.1 Protein Homology CDS 6506 7558 . - 0 ID=cds-WP_002212031.1;Parent=gene-YPIP275_RS20800;Dbxref=GenBank:WP_002212031.1;Name=WP_002212031.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=L-arginine N-succinyltransferase activity|0008791||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192371.1;locus_tag=YPIP275_RS20800;product=arginine N-succinyltransferase;protein_id=WP_002212031.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 7588 8832 . - . ID=gene-YPIP275_RS20805;Name=YPIP275_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20805;old_locus_tag=YPIP275_3023 NZ_AAOS02000029.1 Protein Homology CDS 7588 8832 . - 0 ID=cds-WP_002216140.1;Parent=gene-YPIP275_RS20805;Dbxref=GenBank:WP_002216140.1;Name=WP_002216140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105173.1;locus_tag=YPIP275_RS20805;product=aspartate aminotransferase family protein;protein_id=WP_002216140.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 9469 10890 . - . ID=gene-YPIP275_RS20815;Name=YPIP275_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20815;old_locus_tag=YPIP275_3024 NZ_AAOS02000029.1 Protein Homology CDS 9469 10890 . - 0 ID=cds-WP_002212033.1;Parent=gene-YPIP275_RS20815;Dbxref=GenBank:WP_002212033.1;Name=WP_002212033.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212033.1;locus_tag=YPIP275_RS20815;product=aminotransferase-like domain-containing protein;protein_id=WP_002212033.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 11013 11132 . + . ID=gene-YPIP275_RS27880;Name=YPIP275_RS27880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27880 NZ_AAOS02000029.1 Protein Homology CDS 11013 11132 . + 0 ID=cds-WP_370696108.1;Parent=gene-YPIP275_RS27880;Dbxref=GenBank:WP_370696108.1;Name=WP_370696108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390769.1;locus_tag=YPIP275_RS27880;product=DUF2474 domain-containing protein;protein_id=WP_370696108.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 11200 12981 . + . ID=gene-YPIP275_RS20820;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=YPIP275_RS20820;old_locus_tag=YPIP275_3026 NZ_AAOS02000029.1 Protein Homology CDS 11200 12981 . + 0 ID=cds-WP_002212035.1;Parent=gene-YPIP275_RS20820;Dbxref=GenBank:WP_002212035.1;Name=WP_002212035.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212035.1;locus_tag=YPIP275_RS20820;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_002212035.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 13530 14630 . + . ID=gene-YPIP275_RS20825;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS20825;old_locus_tag=YPIP275_3027 NZ_AAOS02000029.1 Protein Homology CDS 13530 14630 . + 0 ID=cds-WP_002212036.1;Parent=gene-YPIP275_RS20825;Dbxref=GenBank:WP_002212036.1;Name=WP_002212036.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706461.1;locus_tag=YPIP275_RS20825;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_002212036.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 14733 15521 . - . ID=gene-YPIP275_RS20830;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=YPIP275_RS20830;old_locus_tag=YPIP275_3028 NZ_AAOS02000029.1 Protein Homology CDS 14733 15521 . - 0 ID=cds-WP_002212037.1;Parent=gene-YPIP275_RS20830;Dbxref=GenBank:WP_002212037.1;Name=WP_002212037.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=YPIP275_RS20830;product=phosphate starvation-inducible protein PhoH;protein_id=WP_002212037.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 15581 15859 . - . ID=gene-YPIP275_RS20835;Name=YPIP275_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20835;old_locus_tag=YPIP275_3029 NZ_AAOS02000029.1 Protein Homology CDS 15581 15859 . - 0 ID=cds-WP_002212038.1;Parent=gene-YPIP275_RS20835;Dbxref=GenBank:WP_002212038.1;Name=WP_002212038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105175.1;locus_tag=YPIP275_RS20835;product=hypothetical protein;protein_id=WP_002212038.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 16298 16897 . - . ID=gene-YPIP275_RS20840;Name=YPIP275_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20840;old_locus_tag=YPIP275_3030 NZ_AAOS02000029.1 Protein Homology CDS 16298 16897 . - 0 ID=cds-WP_002353354.1;Parent=gene-YPIP275_RS20840;Dbxref=GenBank:WP_002353354.1;Name=WP_002353354.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353354.1;locus_tag=YPIP275_RS20840;product=GNAT family N-acetyltransferase;protein_id=WP_002353354.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 17530 17997 . - . ID=gene-YPIP275_RS20845;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;locus_tag=YPIP275_RS20845;old_locus_tag=YPIP275_3032 NZ_AAOS02000029.1 Protein Homology CDS 17530 17997 . - 0 ID=cds-WP_002212041.1;Parent=gene-YPIP275_RS20845;Dbxref=GenBank:WP_002212041.1;Name=WP_002212041.1;gbkey=CDS;gene=pgaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192367.1;locus_tag=YPIP275_RS20845;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_002212041.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 17994 19328 . - . ID=gene-YPIP275_RS20850;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=YPIP275_RS20850;old_locus_tag=YPIP275_3033 NZ_AAOS02000029.1 Protein Homology CDS 17994 19328 . - 0 ID=cds-WP_002212042.1;Parent=gene-YPIP275_RS20850;Dbxref=GenBank:WP_002212042.1;Name=WP_002212042.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224456.1;locus_tag=YPIP275_RS20850;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_002212042.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 19318 21339 . - . ID=gene-YPIP275_RS20855;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=YPIP275_RS20855;old_locus_tag=YPIP275_3034 NZ_AAOS02000029.1 Protein Homology CDS 19318 21339 . - 0 ID=cds-WP_002212043.1;Parent=gene-YPIP275_RS20855;Dbxref=GenBank:WP_002212043.1;Name=WP_002212043.1;gbkey=CDS;gene=pgaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906229.1;locus_tag=YPIP275_RS20855;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_002212043.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 21352 23820 . - . ID=gene-YPIP275_RS20860;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS20860;old_locus_tag=YPIP275_3035 NZ_AAOS02000029.1 Protein Homology CDS 21352 23820 . - 0 ID=cds-WP_002212044.1;Parent=gene-YPIP275_RS20860;Dbxref=GenBank:WP_002212044.1;Name=WP_002212044.1;gbkey=CDS;gene=pgaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212044.1;locus_tag=YPIP275_RS20860;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;protein_id=WP_002212044.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 24489 25706 . - . ID=gene-YPIP275_RS20865;Name=YPIP275_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20865;old_locus_tag=YPIP275_3036 NZ_AAOS02000029.1 Protein Homology CDS 24489 25706 . - 0 ID=cds-WP_002212045.1;Parent=gene-YPIP275_RS20865;Dbxref=GenBank:WP_002212045.1;Name=WP_002212045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192365.1;locus_tag=YPIP275_RS20865;product=M24 family metallopeptidase;protein_id=WP_002212045.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 25847 26734 . - . ID=gene-YPIP275_RS20870;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=YPIP275_RS20870;old_locus_tag=YPIP275_3037 NZ_AAOS02000029.1 Protein Homology CDS 25847 26734 . - 0 ID=cds-WP_002212046.1;Parent=gene-YPIP275_RS20870;Dbxref=GenBank:WP_002212046.1;Name=WP_002212046.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212046.1;locus_tag=YPIP275_RS20870;product=SAM-dependent methyltransferase TehB;protein_id=WP_002212046.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 26907 27218 . - . ID=gene-YPIP275_RS20875;Name=YPIP275_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20875;old_locus_tag=YPIP275_3038 NZ_AAOS02000029.1 Protein Homology CDS 26907 27218 . - 0 ID=cds-WP_002227951.1;Parent=gene-YPIP275_RS20875;Dbxref=GenBank:WP_002227951.1;Name=WP_002227951.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105177.1;locus_tag=YPIP275_RS20875;product=c-type cytochrome;protein_id=WP_002227951.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 27218 27715 . - . ID=gene-YPIP275_RS20880;Name=YPIP275_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20880;old_locus_tag=YPIP275_3039 NZ_AAOS02000029.1 Protein Homology CDS 27218 27715 . - 0 ID=cds-WP_002212048.1;Parent=gene-YPIP275_RS20880;Dbxref=GenBank:WP_002212048.1;Name=WP_002212048.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674078.1;locus_tag=YPIP275_RS20880;product=TlpA family protein disulfide reductase;protein_id=WP_002212048.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 27705 28418 . - . ID=gene-YPIP275_RS20885;Name=YPIP275_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20885;old_locus_tag=YPIP275_3040 NZ_AAOS02000029.1 Protein Homology CDS 27705 28418 . - 0 ID=cds-WP_002212049.1;Parent=gene-YPIP275_RS20885;Dbxref=GenBank:WP_002212049.1;Name=WP_002212049.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192364.1;locus_tag=YPIP275_RS20885;product=ABC transporter ATP-binding protein;protein_id=WP_002212049.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 28422 29534 . - . ID=gene-YPIP275_RS20890;Name=YPIP275_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20890;old_locus_tag=YPIP275_3041 NZ_AAOS02000029.1 Protein Homology CDS 28422 29534 . - 0 ID=cds-WP_002353352.1;Parent=gene-YPIP275_RS20890;Dbxref=GenBank:WP_002353352.1;Name=WP_002353352.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353352.1;locus_tag=YPIP275_RS20890;product=ABC transporter permease;protein_id=WP_002353352.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 29575 30867 . - . ID=gene-YPIP275_RS20895;Name=YPIP275_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20895;old_locus_tag=YPIP275_3042 NZ_AAOS02000029.1 Protein Homology CDS 29575 30867 . - 0 ID=cds-WP_002212051.1;Parent=gene-YPIP275_RS20895;Dbxref=GenBank:WP_002212051.1;Name=WP_002212051.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906231.1;locus_tag=YPIP275_RS20895;product=ABC transporter permease;protein_id=WP_002212051.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 30870 32279 . - . ID=gene-YPIP275_RS20900;Name=YPIP275_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20900;old_locus_tag=YPIP275_3043 NZ_AAOS02000029.1 Protein Homology CDS 30870 32279 . - 0 ID=cds-WP_002212052.1;Parent=gene-YPIP275_RS20900;Dbxref=GenBank:WP_002212052.1;Name=WP_002212052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212052.1;locus_tag=YPIP275_RS20900;product=Fe-S-containing protein;protein_id=WP_002212052.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 32580 33107 . - . ID=gene-YPIP275_RS20905;Name=YPIP275_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20905;old_locus_tag=YPIP275_3044 NZ_AAOS02000029.1 Protein Homology CDS 32580 33107 . - 0 ID=cds-WP_002212053.1;Parent=gene-YPIP275_RS20905;Dbxref=GenBank:WP_002212053.1;Name=WP_002212053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674077.1;locus_tag=YPIP275_RS20905;product=iron transporter;protein_id=WP_002212053.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 33311 35230 . - . ID=gene-YPIP275_RS20910;Name=YPIP275_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20910;old_locus_tag=YPIP275_3045 NZ_AAOS02000029.1 Protein Homology CDS 33311 35230 . - 0 ID=cds-WP_002213978.1;Parent=gene-YPIP275_RS20910;Dbxref=GenBank:WP_002213978.1;Name=WP_002213978.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192362.1;locus_tag=YPIP275_RS20910;product=FTR1 family iron permease;protein_id=WP_002213978.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 35811 37451 . - . ID=gene-YPIP275_RS20915;Name=YPIP275_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20915;old_locus_tag=YPIP275_3046 NZ_AAOS02000029.1 Protein Homology CDS 35811 37451 . - 0 ID=cds-WP_002213976.1;Parent=gene-YPIP275_RS20915;Dbxref=GenBank:WP_002213976.1;Name=WP_002213976.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256492.1;locus_tag=YPIP275_RS20915;product=MFS transporter;protein_id=WP_002213976.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 37562 38569 . - . ID=gene-YPIP275_RS20920;Name=glsA;gbkey=Gene;gene=glsA;gene_biotype=protein_coding;locus_tag=YPIP275_RS20920;old_locus_tag=YPIP275_3047 NZ_AAOS02000029.1 Protein Homology CDS 37562 38569 . - 0 ID=cds-WP_002212056.1;Parent=gene-YPIP275_RS20920;Dbxref=GenBank:WP_002212056.1;Name=WP_002212056.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsA;go_function=glutaminase activity|0004359||IEA;go_process=L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212056.1;locus_tag=YPIP275_RS20920;product=glutaminase A;protein_id=WP_002212056.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 39021 39227 . - . ID=gene-YPIP275_RS27890;Name=YPIP275_RS27890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27890;old_locus_tag=YPIP275_3048 NZ_AAOS02000029.1 Protein Homology CDS 39021 39227 . - 0 ID=cds-WP_002213974.1;Parent=gene-YPIP275_RS27890;Dbxref=GenBank:WP_002213974.1;Name=WP_002213974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213974.1;locus_tag=YPIP275_RS27890;product=hypothetical protein;protein_id=WP_002213974.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 39780 40550 . + . ID=gene-YPIP275_RS20925;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=YPIP275_RS20925;old_locus_tag=YPIP275_3050 NZ_AAOS02000029.1 Protein Homology CDS 39780 40550 . + 0 ID=cds-WP_002212058.1;Parent=gene-YPIP275_RS20925;Dbxref=GenBank:WP_002212058.1;Name=WP_002212058.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212058.1;locus_tag=YPIP275_RS20925;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_002212058.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 41272 42801 . + . ID=gene-YPIP275_RS20930;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=YPIP275_RS20930;old_locus_tag=YPIP275_3051 NZ_AAOS02000029.1 Protein Homology CDS 41272 42801 . + 0 ID=cds-WP_002212059.1;Parent=gene-YPIP275_RS20930;Dbxref=GenBank:WP_002212059.1;Name=WP_002212059.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212059.1;locus_tag=YPIP275_RS20930;product=L-asparagine permease;protein_id=WP_002212059.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 42997 44157 . - . ID=gene-YPIP275_RS20935;Name=YPIP275_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20935;old_locus_tag=YPIP275_3052 NZ_AAOS02000029.1 Protein Homology CDS 42997 44157 . - 0 ID=cds-WP_002212060.1;Parent=gene-YPIP275_RS20935;Dbxref=GenBank:WP_002212060.1;Name=WP_002212060.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212060.1;locus_tag=YPIP275_RS20935;product=aminotransferase-like domain-containing protein;protein_id=WP_002212060.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 44509 45108 . + . ID=gene-YPIP275_RS20940;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=YPIP275_RS20940;old_locus_tag=YPIP275_3053 NZ_AAOS02000029.1 Protein Homology CDS 44509 45108 . + 0 ID=cds-WP_002212061.1;Parent=gene-YPIP275_RS20940;Dbxref=GenBank:WP_002212061.1;Name=WP_002212061.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906232.1;locus_tag=YPIP275_RS20940;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_002212061.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 45413 46375 . - . ID=gene-YPIP275_RS20945;Name=YPIP275_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20945;old_locus_tag=YPIP275_3054 NZ_AAOS02000029.1 Protein Homology CDS 45413 46375 . - 0 ID=cds-WP_002212062.1;Parent=gene-YPIP275_RS20945;Dbxref=GenBank:WP_002212062.1;Name=WP_002212062.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212062.1;locus_tag=YPIP275_RS20945;product=LysR family transcriptional regulator;protein_id=WP_002212062.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 46487 47356 . + . ID=gene-YPIP275_RS20950;Name=YPIP275_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20950;old_locus_tag=YPIP275_3055 NZ_AAOS02000029.1 Protein Homology CDS 46487 47356 . + 0 ID=cds-WP_002212063.1;Parent=gene-YPIP275_RS20950;Dbxref=GenBank:WP_002212063.1;Name=WP_002212063.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304148.1;locus_tag=YPIP275_RS20950;product=amidohydrolase family protein;protein_id=WP_002212063.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 47422 48651 . + . ID=gene-YPIP275_RS20955;Name=YPIP275_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20955;old_locus_tag=YPIP275_3056 NZ_AAOS02000029.1 Protein Homology CDS 47422 48651 . + 0 ID=cds-WP_002212064.1;Parent=gene-YPIP275_RS20955;Dbxref=GenBank:WP_002212064.1;Name=WP_002212064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105182.1;locus_tag=YPIP275_RS20955;product=MFS transporter;protein_id=WP_002212064.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 48871 49431 . + . ID=gene-YPIP275_RS20960;Name=YPIP275_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20960;old_locus_tag=YPIP275_3057 NZ_AAOS02000029.1 Protein Homology CDS 48871 49431 . + 0 ID=cds-WP_002212065.1;Parent=gene-YPIP275_RS20960;Dbxref=GenBank:WP_002212065.1;Name=WP_002212065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192360.1;locus_tag=YPIP275_RS20960;product=hypothetical protein;protein_id=WP_002212065.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 49456 49929 . + . ID=gene-YPIP275_RS20965;Name=YPIP275_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20965;old_locus_tag=YPIP275_3058 NZ_AAOS02000029.1 Protein Homology CDS 49456 49929 . + 0 ID=cds-WP_002212066.1;Parent=gene-YPIP275_RS20965;Dbxref=GenBank:WP_002212066.1;Name=WP_002212066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192359.1;locus_tag=YPIP275_RS20965;product=transthyretin-like family protein;protein_id=WP_002212066.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 50004 50882 . - . ID=gene-YPIP275_RS20970;Name=ripR;gbkey=Gene;gene=ripR;gene_biotype=protein_coding;locus_tag=YPIP275_RS20970;old_locus_tag=YPIP275_3059 NZ_AAOS02000029.1 Protein Homology CDS 50004 50882 . - 0 ID=cds-WP_002212067.1;Parent=gene-YPIP275_RS20970;Dbxref=GenBank:WP_002212067.1;Name=WP_002212067.1;gbkey=CDS;gene=ripR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212067.1;locus_tag=YPIP275_RS20970;product=itaconate degradation transcriptional regulator RipR;protein_id=WP_002212067.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 50977 51819 . + . ID=gene-YPIP275_RS20975;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=YPIP275_RS20975;old_locus_tag=YPIP275_3060 NZ_AAOS02000029.1 Protein Homology CDS 50977 51819 . + 0 ID=cds-WP_002212068.1;Parent=gene-YPIP275_RS20975;Dbxref=GenBank:WP_002212068.1;Name=WP_002212068.1;Note=Third step in itaconate degradation.;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105185.1;locus_tag=YPIP275_RS20975;product=itaconate degradation C-C-lyase RipC;protein_id=WP_002212068.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 51884 52411 . + . ID=gene-YPIP275_RS20980;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=protein_coding;locus_tag=YPIP275_RS20980;old_locus_tag=YPIP275_3061 NZ_AAOS02000029.1 Protein Homology CDS 51884 52411 . + 0 ID=cds-WP_002212069.1;Parent=gene-YPIP275_RS20980;Dbxref=GenBank:WP_002212069.1;Name=WP_002212069.1;Note=Second step in itaconate degradation.;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462034.1;locus_tag=YPIP275_RS20980;product=(R)-specific enoyl-CoA hydratase RipB/Ich;protein_id=WP_002212069.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 52434 53756 . + . ID=gene-YPIP275_RS20985;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;gene_synonym=ict;locus_tag=YPIP275_RS20985;old_locus_tag=YPIP275_3062 NZ_AAOS02000029.1 Protein Homology CDS 52434 53756 . + 0 ID=cds-WP_002212070.1;Parent=gene-YPIP275_RS20985;Dbxref=GenBank:WP_002212070.1;Name=WP_002212070.1;Note=Transfers CoA from succinate to itaconate;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230830.1;locus_tag=YPIP275_RS20985;product=itaconate CoA-transferase RipA/Ict;protein_id=WP_002212070.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 54582 55214 . + . ID=gene-YPIP275_RS20990;Name=YPIP275_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20990;old_locus_tag=YPIP275_3065 NZ_AAOS02000029.1 Protein Homology CDS 54582 55214 . + 0 ID=cds-WP_002212073.1;Parent=gene-YPIP275_RS20990;Dbxref=GenBank:WP_002212073.1;Name=WP_002212073.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002361775.1;locus_tag=YPIP275_RS20990;product=response regulator transcription factor;protein_id=WP_002212073.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 55312 56583 . + . ID=gene-YPIP275_RS20995;Name=YPIP275_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20995;old_locus_tag=YPIP275_3066 NZ_AAOS02000029.1 Protein Homology CDS 55312 56583 . + 0 ID=cds-WP_002353358.1;Parent=gene-YPIP275_RS20995;Dbxref=GenBank:WP_002353358.1;Name=WP_002353358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353358.1;locus_tag=YPIP275_RS20995;product=type 2 periplasmic-binding domain-containing protein;protein_id=WP_002353358.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 56628 59039 . + . ID=gene-YPIP275_RS21000;Name=YPIP275_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21000;old_locus_tag=YPIP275_3067 NZ_AAOS02000029.1 Protein Homology CDS 56628 59039 . + 0 ID=cds-WP_002230261.1;Parent=gene-YPIP275_RS21000;Dbxref=GenBank:WP_002230261.1;Name=WP_002230261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002429069.1;locus_tag=YPIP275_RS21000;product=ATP-binding protein;protein_id=WP_002230261.1;transl_table=11 NZ_AAOS02000029.1 RefSeq gene 59552 60106 . + . ID=gene-YPIP275_RS21005;Name=YPIP275_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS21005;old_locus_tag=YPIP275_3069 NZ_AAOS02000029.1 Protein Homology CDS 59552 60106 . + 0 ID=cds-WP_002212075.1;Parent=gene-YPIP275_RS21005;Dbxref=GenBank:WP_002212075.1;Name=WP_002212075.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906235.1;locus_tag=YPIP275_RS21005;product=fimbrial protein;protein_id=WP_002212075.1;transl_table=11 NZ_AAOS02000029.1 RefSeq pseudogene 60116 60896 . - . ID=gene-YPIP275_RS21010;Name=istB;gbkey=Gene;gene=istB;gene_biotype=pseudogene;locus_tag=YPIP275_RS21010;old_locus_tag=YPIP275_3070;pseudo=true NZ_AAOS02000029.1 Protein Homology CDS 60116 60896 . - 0 ID=cds-YPIP275_RS21010;Parent=gene-YPIP275_RS21010;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;gene=istB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS21010;product=IS21-like element helper ATPase IstB;pseudo=true;transl_table=11 ##sequence-region NZ_AAOS02000028.1 1 61938 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000028.1 RefSeq region 1 61938 . + . ID=NZ_AAOS02000028.1:1..61938;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000028.1 RefSeq gene 1 1380 . - . ID=gene-YPIP275_RS20480;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=YPIP275_RS20480;old_locus_tag=YPIP275_1243;partial=true;start_range=.,1 NZ_AAOS02000028.1 Protein Homology CDS 1 1380 . - 0 ID=cds-WP_043940363.1;Parent=gene-YPIP275_RS20480;Dbxref=GenBank:WP_043940363.1;Name=WP_043940363.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104302.1;locus_tag=YPIP275_RS20480;partial=true;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_043940363.1;start_range=.,1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 1904 2644 . - . ID=gene-YPIP275_RS20485;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=YPIP275_RS20485;old_locus_tag=YPIP275_1245 NZ_AAOS02000028.1 Protein Homology CDS 1904 2644 . - 0 ID=cds-WP_002211977.1;Parent=gene-YPIP275_RS20485;Dbxref=GenBank:WP_002211977.1;Name=WP_002211977.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211977.1;locus_tag=YPIP275_RS20485;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_002211977.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 2653 4017 . - . ID=gene-YPIP275_RS20490;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=YPIP275_RS20490;old_locus_tag=YPIP275_1246 NZ_AAOS02000028.1 Protein Homology CDS 2653 4017 . - 0 ID=cds-WP_002211978.1;Parent=gene-YPIP275_RS20490;Dbxref=GenBank:WP_002211978.1;Name=WP_002211978.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211978.1;locus_tag=YPIP275_RS20490;product=ECA oligosaccharide polymerase;protein_id=WP_002211978.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 4014 5099 . - . ID=gene-YPIP275_RS20495;Name=YPIP275_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20495;old_locus_tag=YPIP275_1247 NZ_AAOS02000028.1 Protein Homology CDS 4014 5099 . - 0 ID=cds-WP_002211979.1;Parent=gene-YPIP275_RS20495;Dbxref=GenBank:WP_002211979.1;Name=WP_002211979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906447.1;locus_tag=YPIP275_RS20495;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_002211979.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 5122 6378 . - . ID=gene-YPIP275_RS20500;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=YPIP275_RS20500;old_locus_tag=YPIP275_1248 NZ_AAOS02000028.1 Protein Homology CDS 5122 6378 . - 0 ID=cds-WP_002211980.1;Parent=gene-YPIP275_RS20500;Dbxref=GenBank:WP_002211980.1;Name=WP_002211980.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304736.1;locus_tag=YPIP275_RS20500;product=lipid III flippase WzxE;protein_id=WP_002211980.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 6380 7510 . - . ID=gene-YPIP275_RS20505;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=YPIP275_RS20505;old_locus_tag=YPIP275_1249 NZ_AAOS02000028.1 Protein Homology CDS 6380 7510 . - 0 ID=cds-WP_002211981.1;Parent=gene-YPIP275_RS20505;Dbxref=GenBank:WP_002211981.1;Name=WP_002211981.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose:2-oxoglutarate transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304737.1;locus_tag=YPIP275_RS20505;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_002211981.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 7512 8249 . - . ID=gene-YPIP275_RS20510;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=YPIP275_RS20510;old_locus_tag=YPIP275_1250 NZ_AAOS02000028.1 Protein Homology CDS 7512 8249 . - 0 ID=cds-WP_002211982.1;Parent=gene-YPIP275_RS20510;Dbxref=GenBank:WP_002211982.1;Name=WP_002211982.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211982.1;locus_tag=YPIP275_RS20510;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_002211982.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 8227 9108 . - . ID=gene-YPIP275_RS20515;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=YPIP275_RS20515;old_locus_tag=YPIP275_1251 NZ_AAOS02000028.1 Protein Homology CDS 8227 9108 . - 0 ID=cds-WP_002211983.1;Parent=gene-YPIP275_RS20515;Dbxref=GenBank:WP_002211983.1;Name=WP_002211983.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418236.1;locus_tag=YPIP275_RS20515;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_002211983.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 9403 10476 . - . ID=gene-YPIP275_RS20520;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=YPIP275_RS20520;old_locus_tag=YPIP275_1252 NZ_AAOS02000028.1 Protein Homology CDS 9403 10476 . - 0 ID=cds-WP_002216798.1;Parent=gene-YPIP275_RS20520;Dbxref=GenBank:WP_002216798.1;Name=WP_002216798.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950882.1;locus_tag=YPIP275_RS20520;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_002216798.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 10467 11729 . - . ID=gene-YPIP275_RS20525;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=YPIP275_RS20525;old_locus_tag=YPIP275_1253 NZ_AAOS02000028.1 Protein Homology CDS 10467 11729 . - 0 ID=cds-WP_002211985.1;Parent=gene-YPIP275_RS20525;Dbxref=GenBank:WP_002211985.1;Name=WP_002211985.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=YPIP275_RS20525;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_002211985.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 11726 12856 . - . ID=gene-YPIP275_RS20530;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=YPIP275_RS20530;old_locus_tag=YPIP275_1254 NZ_AAOS02000028.1 Protein Homology CDS 11726 12856 . - 0 ID=cds-WP_002211986.1;Parent=gene-YPIP275_RS20530;Dbxref=GenBank:WP_002211986.1;Name=WP_002211986.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211986.1;locus_tag=YPIP275_RS20530;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_002211986.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 13137 14213 . - . ID=gene-YPIP275_RS20535;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=YPIP275_RS20535;old_locus_tag=YPIP275_1255 NZ_AAOS02000028.1 Protein Homology CDS 13137 14213 . - 0 ID=cds-WP_002226022.1;Parent=gene-YPIP275_RS20535;Dbxref=GenBank:WP_002226022.1;Name=WP_002226022.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002226022.1;locus_tag=YPIP275_RS20535;product=ECA polysaccharide chain length modulation protein;protein_id=WP_002226022.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 14234 15331 . - . ID=gene-YPIP275_RS20540;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=YPIP275_RS20540;old_locus_tag=YPIP275_1256 NZ_AAOS02000028.1 Protein Homology CDS 14234 15331 . - 0 ID=cds-WP_002211988.1;Parent=gene-YPIP275_RS20540;Dbxref=GenBank:WP_002211988.1;Name=WP_002211988.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080213.1;locus_tag=YPIP275_RS20540;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_002211988.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 15866 17125 . - . ID=gene-YPIP275_RS20545;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=YPIP275_RS20545;old_locus_tag=YPIP275_1257 NZ_AAOS02000028.1 Protein Homology CDS 15866 17125 . - 0 ID=cds-WP_002211989.1;Parent=gene-YPIP275_RS20545;Dbxref=GenBank:WP_002211989.1;Name=WP_002211989.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=YPIP275_RS20545;product=transcription termination factor Rho;protein_id=WP_002211989.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 17605 17931 . - . ID=gene-YPIP275_RS20550;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=YPIP275_RS20550;old_locus_tag=YPIP275_1258 NZ_AAOS02000028.1 Protein Homology CDS 17605 17931 . - 0 ID=cds-WP_002211990.1;Parent=gene-YPIP275_RS20550;Dbxref=GenBank:WP_002211990.1;Name=WP_002211990.1;Ontology_term=GO:0045454,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906449.1;locus_tag=YPIP275_RS20550;product=thioredoxin TrxA;protein_id=WP_002211990.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 18050 19336 . + . ID=gene-YPIP275_RS20555;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=YPIP275_RS20555;old_locus_tag=YPIP275_1259 NZ_AAOS02000028.1 Protein Homology CDS 18050 19336 . + 0 ID=cds-WP_002228177.1;Parent=gene-YPIP275_RS20555;Dbxref=GenBank:WP_002228177.1;Name=WP_002228177.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228177.1;locus_tag=YPIP275_RS20555;product=ATP-dependent RNA helicase RhlB;protein_id=WP_002228177.1;transl_table=11 NZ_AAOS02000028.1 RefSeq pseudogene 19343 20834 . + . ID=gene-YPIP275_RS20565;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=pseudogene;locus_tag=YPIP275_RS20565;old_locus_tag=YPIP275_1260;pseudo=true NZ_AAOS02000028.1 Protein Homology CDS 19343 20834 . + 0 ID=cds-YPIP275_RS20565;Parent=gene-YPIP275_RS20565;Note=frameshifted;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704162.1;locus_tag=YPIP275_RS20565;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;pseudo=true;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 21002 23023 . - . ID=gene-YPIP275_RS20570;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=YPIP275_RS20570;old_locus_tag=YPIP275_1262 NZ_AAOS02000028.1 Protein Homology CDS 21002 23023 . - 0 ID=cds-WP_002211993.1;Parent=gene-YPIP275_RS20570;Dbxref=GenBank:WP_002211993.1;Name=WP_002211993.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104296.1;locus_tag=YPIP275_RS20570;product=DNA helicase Rep;protein_id=WP_002211993.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 23022 23207 . + . ID=gene-YPIP275_RS20575;Name=YPIP275_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20575;old_locus_tag=YPIP275_1263 NZ_AAOS02000028.1 Protein Homology CDS 23022 23207 . + 0 ID=cds-WP_002215828.1;Parent=gene-YPIP275_RS20575;Dbxref=GenBank:WP_002215828.1;Name=WP_002215828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215828.1;locus_tag=YPIP275_RS20575;product=hypothetical protein;protein_id=WP_002215828.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 23227 23508 . + . ID=gene-YPIP275_RS20580;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=YPIP275_RS20580;old_locus_tag=YPIP275_1264 NZ_AAOS02000028.1 Protein Homology CDS 23227 23508 . + 0 ID=cds-WP_002211995.1;Parent=gene-YPIP275_RS20580;Dbxref=GenBank:WP_002211995.1;Name=WP_002211995.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004721654.1;locus_tag=YPIP275_RS20580;product=peptidylprolyl isomerase PpiC;protein_id=WP_002211995.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 23747 24538 . + . ID=gene-YPIP275_RS20585;Name=YPIP275_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20585;old_locus_tag=YPIP275_1265 NZ_AAOS02000028.1 Protein Homology CDS 23747 24538 . + 0 ID=cds-WP_002211996.1;Parent=gene-YPIP275_RS20585;Dbxref=GenBank:WP_002211996.1;Name=WP_002211996.1;Ontology_term=GO:0017186,GO:0016603;gbkey=CDS;go_function=glutaminyl-peptide cyclotransferase activity|0016603||IEA;go_process=peptidyl-pyroglutamic acid biosynthetic process%2C using glutaminyl-peptide cyclotransferase|0017186||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211996.1;locus_tag=YPIP275_RS20585;product=glutaminyl-peptide cyclotransferase;protein_id=WP_002211996.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 24635 25843 . + . ID=gene-YPIP275_RS20590;Name=YPIP275_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20590;old_locus_tag=YPIP275_1266 NZ_AAOS02000028.1 Protein Homology CDS 24635 25843 . + 0 ID=cds-WP_002209743.1-5;Parent=gene-YPIP275_RS20590;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS20590;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 26653 27183 . + . ID=gene-YPIP275_RS20600;Name=YPIP275_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20600;old_locus_tag=YPIP275_1267 NZ_AAOS02000028.1 Protein Homology CDS 26653 27183 . + 0 ID=cds-WP_002211997.1;Parent=gene-YPIP275_RS20600;Dbxref=GenBank:WP_002211997.1;Name=WP_002211997.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211997.1;locus_tag=YPIP275_RS20600;product=fimbrial protein;protein_id=WP_002211997.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 27247 27978 . + . ID=gene-YPIP275_RS20605;Name=YPIP275_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20605;old_locus_tag=YPIP275_1268 NZ_AAOS02000028.1 Protein Homology CDS 27247 27978 . + 0 ID=cds-WP_002211998.1;Parent=gene-YPIP275_RS20605;Dbxref=GenBank:WP_002211998.1;Name=WP_002211998.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211998.1;locus_tag=YPIP275_RS20605;product=fimbrial biogenesis chaperone;protein_id=WP_002211998.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 28006 30633 . + . ID=gene-YPIP275_RS20610;Name=YPIP275_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20610;old_locus_tag=YPIP275_1269 NZ_AAOS02000028.1 Protein Homology CDS 28006 30633 . + 0 ID=cds-WP_002211999.1;Parent=gene-YPIP275_RS20610;Dbxref=GenBank:WP_002211999.1;Name=WP_002211999.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016588590.1;locus_tag=YPIP275_RS20610;product=fimbria/pilus outer membrane usher protein;protein_id=WP_002211999.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 30650 32017 . + . ID=gene-YPIP275_RS20615;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=YPIP275_RS20615;old_locus_tag=YPIP275_1270 NZ_AAOS02000028.1 Protein Homology CDS 30650 32017 . + 0 ID=cds-WP_002212000.1;Parent=gene-YPIP275_RS20615;Dbxref=GenBank:WP_002212000.1;Name=WP_002212000.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212000.1;locus_tag=YPIP275_RS20615;product=fimbrial usher protein StbD;protein_id=WP_002212000.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 32121 32801 . + . ID=gene-YPIP275_RS20620;Name=YPIP275_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20620;old_locus_tag=YPIP275_1271 NZ_AAOS02000028.1 Protein Homology CDS 32121 32801 . + 0 ID=cds-WP_445530160.1;Parent=gene-YPIP275_RS20620;Dbxref=GenBank:WP_445530160.1;Name=WP_445530160.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004714225.1;locus_tag=YPIP275_RS20620;product=fimbrial biogenesis chaperone;protein_id=WP_445530160.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 33436 33693 . - . ID=gene-YPIP275_RS20630;Name=YPIP275_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20630;old_locus_tag=YPIP275_1273 NZ_AAOS02000028.1 Protein Homology CDS 33436 33693 . - 0 ID=cds-WP_002212003.1;Parent=gene-YPIP275_RS20630;Dbxref=GenBank:WP_002212003.1;Name=WP_002212003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212003.1;locus_tag=YPIP275_RS20630;product=bacteriocin immunity protein;protein_id=WP_002212003.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 33695 33928 . - . ID=gene-YPIP275_RS20635;Name=YPIP275_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20635 NZ_AAOS02000028.1 Protein Homology CDS 33695 33928 . - 0 ID=cds-WP_002384504.1;Parent=gene-YPIP275_RS20635;Dbxref=GenBank:WP_002384504.1;Name=WP_002384504.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF044473.5;locus_tag=YPIP275_RS20635;product=HNH endonuclease signature motif containing protein;protein_id=WP_002384504.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 34199 34462 . - . ID=gene-YPIP275_RS20640;Name=YPIP275_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20640;old_locus_tag=YPIP275_1274 NZ_AAOS02000028.1 Protein Homology CDS 34199 34462 . - 0 ID=cds-WP_002212004.1;Parent=gene-YPIP275_RS20640;Dbxref=GenBank:WP_002212004.1;Name=WP_002212004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212004.1;locus_tag=YPIP275_RS20640;product=hypothetical protein;protein_id=WP_002212004.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 34462 35892 . - . ID=gene-YPIP275_RS20645;Name=YPIP275_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20645;old_locus_tag=YPIP275_1275 NZ_AAOS02000028.1 Protein Homology CDS 34462 35892 . - 0 ID=cds-WP_002212005.1;Parent=gene-YPIP275_RS20645;Dbxref=GenBank:WP_002212005.1;Name=WP_002212005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016261668.1;locus_tag=YPIP275_RS20645;product=S-type pyocin domain-containing protein;protein_id=WP_002212005.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 36100 36300 . - . ID=gene-YPIP275_RS20650;Name=YPIP275_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20650;old_locus_tag=YPIP275_1276 NZ_AAOS02000028.1 Protein Homology CDS 36100 36300 . - 0 ID=cds-WP_002212006.1;Parent=gene-YPIP275_RS20650;Dbxref=GenBank:WP_002212006.1;Name=WP_002212006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212006.1;locus_tag=YPIP275_RS20650;product=hypothetical protein;protein_id=WP_002212006.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 36481 37959 . - . ID=gene-YPIP275_RS20655;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=YPIP275_RS20655;old_locus_tag=YPIP275_1277 NZ_AAOS02000028.1 Protein Homology CDS 36481 37959 . - 0 ID=cds-WP_002212007.1;Parent=gene-YPIP275_RS20655;Dbxref=GenBank:WP_002212007.1;Name=WP_002212007.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=YPIP275_RS20655;product=ketol-acid reductoisomerase;protein_id=WP_002212007.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 38245 39126 . + . ID=gene-YPIP275_RS20660;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=YPIP275_RS20660;old_locus_tag=YPIP275_1278 NZ_AAOS02000028.1 Protein Homology CDS 38245 39126 . + 0 ID=cds-WP_002212008.1;Parent=gene-YPIP275_RS20660;Dbxref=GenBank:WP_002212008.1;Name=WP_002212008.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080226.1;locus_tag=YPIP275_RS20660;product=HTH-type transcriptional activator IlvY;protein_id=WP_002212008.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 39181 39390 . - . ID=gene-YPIP275_RS20665;Name=YPIP275_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20665;old_locus_tag=YPIP275_1279 NZ_AAOS02000028.1 Protein Homology CDS 39181 39390 . - 0 ID=cds-WP_002212009.1;Parent=gene-YPIP275_RS20665;Dbxref=GenBank:WP_002212009.1;Name=WP_002212009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212009.1;locus_tag=YPIP275_RS20665;product=hypothetical protein;protein_id=WP_002212009.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 40038 40193 . + . ID=gene-YPIP275_RS20670;Name=YPIP275_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20670 NZ_AAOS02000028.1 Protein Homology CDS 40038 40193 . + 0 ID=cds-WP_002229747.1;Parent=gene-YPIP275_RS20670;Dbxref=GenBank:WP_002229747.1;Name=WP_002229747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229747.1;locus_tag=YPIP275_RS20670;product=DUF3289 family protein;protein_id=WP_002229747.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 40232 40957 . + . ID=gene-YPIP275_RS20675;Name=YPIP275_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20675;old_locus_tag=YPIP275_1280 NZ_AAOS02000028.1 Protein Homology CDS 40232 40957 . + 0 ID=cds-WP_232558129.1;Parent=gene-YPIP275_RS20675;Dbxref=GenBank:WP_232558129.1;Name=WP_232558129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543073.1;locus_tag=YPIP275_RS20675;product=YPO3983 family protein;protein_id=WP_232558129.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 40941 41402 . + . ID=gene-YPIP275_RS20680;Name=YPIP275_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20680;old_locus_tag=YPIP275_1281 NZ_AAOS02000028.1 Protein Homology CDS 40941 41402 . + 0 ID=cds-WP_002212010.1;Parent=gene-YPIP275_RS20680;Dbxref=GenBank:WP_002212010.1;Name=WP_002212010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193247.1;locus_tag=YPIP275_RS20680;product=DUF943 family protein;protein_id=WP_002212010.1;transl_table=11 NZ_AAOS02000028.1 RefSeq pseudogene 41436 41498 . + . ID=gene-YPIP275_RS29275;Name=YPIP275_RS29275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29275;partial=true;pseudo=true;start_range=.,41436 NZ_AAOS02000028.1 Protein Homology CDS 41436 41498 . + 0 ID=cds-YPIP275_RS29275;Parent=gene-YPIP275_RS29275;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230570.1;locus_tag=YPIP275_RS29275;partial=true;product=DUF3289 family protein;pseudo=true;start_range=.,41436;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 41482 41943 . + . ID=gene-YPIP275_RS20685;Name=YPIP275_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20685;old_locus_tag=YPIP275_1282 NZ_AAOS02000028.1 Protein Homology CDS 41482 41943 . + 0 ID=cds-WP_002217000.1;Parent=gene-YPIP275_RS20685;Dbxref=GenBank:WP_002217000.1;Name=WP_002217000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193247.1;locus_tag=YPIP275_RS20685;product=DUF943 family protein;protein_id=WP_002217000.1;transl_table=11 NZ_AAOS02000028.1 RefSeq pseudogene 41977 42039 . + . ID=gene-YPIP275_RS29280;Name=YPIP275_RS29280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29280;partial=true;pseudo=true;start_range=.,41977 NZ_AAOS02000028.1 Protein Homology CDS 41977 42039 . + 0 ID=cds-YPIP275_RS29280;Parent=gene-YPIP275_RS29280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230570.1;locus_tag=YPIP275_RS29280;partial=true;product=DUF3289 family protein;pseudo=true;start_range=.,41977;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 42023 42487 . + . ID=gene-YPIP275_RS20690;Name=YPIP275_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20690;old_locus_tag=YPIP275_1283 NZ_AAOS02000028.1 Protein Homology CDS 42023 42487 . + 0 ID=cds-WP_002216998.1;Parent=gene-YPIP275_RS20690;Dbxref=GenBank:WP_002216998.1;Name=WP_002216998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583182.1;locus_tag=YPIP275_RS20690;product=DUF943 family protein;protein_id=WP_002216998.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 42618 44162 . - . ID=gene-YPIP275_RS20695;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=YPIP275_RS20695;old_locus_tag=YPIP275_1284 NZ_AAOS02000028.1 Protein Homology CDS 42618 44162 . - 0 ID=cds-WP_002212013.1;Parent=gene-YPIP275_RS20695;Dbxref=GenBank:WP_002212013.1;Name=WP_002212013.1;Ontology_term=GO:1901705,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=L-isoleucine biosynthetic process|1901705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010294667.1;locus_tag=YPIP275_RS20695;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_002212013.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 44168 46018 . - . ID=gene-YPIP275_RS20700;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=YPIP275_RS20700;old_locus_tag=YPIP275_1285 NZ_AAOS02000028.1 Protein Homology CDS 44168 46018 . - 0 ID=cds-WP_002212014.1;Parent=gene-YPIP275_RS20700;Dbxref=GenBank:WP_002212014.1;Name=WP_002212014.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=YPIP275_RS20700;product=dihydroxy-acid dehydratase;protein_id=WP_002212014.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 46329 47255 . - . ID=gene-YPIP275_RS20705;Name=YPIP275_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20705;old_locus_tag=YPIP275_1286 NZ_AAOS02000028.1 Protein Homology CDS 46329 47255 . - 0 ID=cds-WP_002212015.1;Parent=gene-YPIP275_RS20705;Dbxref=GenBank:WP_002212015.1;Name=WP_002212015.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid:2-oxoglutarate transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212015.1;locus_tag=YPIP275_RS20705;product=branched-chain amino acid transaminase;protein_id=WP_002212015.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 47278 47535 . - . ID=gene-YPIP275_RS20710;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=YPIP275_RS20710;old_locus_tag=YPIP275_1287 NZ_AAOS02000028.1 Protein Homology CDS 47278 47535 . - 0 ID=cds-WP_002212016.1;Parent=gene-YPIP275_RS20710;Dbxref=GenBank:WP_002212016.1;Name=WP_002212016.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212016.1;locus_tag=YPIP275_RS20710;product=acetolactate synthase 2 small subunit;protein_id=WP_002212016.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 47532 49178 . - . ID=gene-YPIP275_RS20715;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=YPIP275_RS20715;old_locus_tag=YPIP275_1288 NZ_AAOS02000028.1 Protein Homology CDS 47532 49178 . - 0 ID=cds-WP_002212017.1;Parent=gene-YPIP275_RS20715;Dbxref=GenBank:WP_002212017.1;Name=WP_002212017.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212017.1;locus_tag=YPIP275_RS20715;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_002212017.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 49319 49417 . - . ID=gene-YPIP275_RS27865;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=YPIP275_RS27865 NZ_AAOS02000028.1 Protein Homology CDS 49319 49417 . - 0 ID=cds-WP_002231873.1;Parent=gene-YPIP275_RS27865;Dbxref=GenBank:WP_002231873.1;Name=WP_002231873.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=YPIP275_RS27865;product=ilv operon leader peptide;protein_id=WP_002231873.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 49801 51324 . + . ID=gene-YPIP275_RS20720;Name=YPIP275_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20720;old_locus_tag=YPIP275_1289 NZ_AAOS02000028.1 Protein Homology CDS 49801 51324 . + 0 ID=cds-WP_002212018.1;Parent=gene-YPIP275_RS20720;Dbxref=GenBank:WP_002212018.1;Name=WP_002212018.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212018.1;locus_tag=YPIP275_RS20720;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_002212018.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 51581 51919 . - . ID=gene-YPIP275_RS20725;Name=YPIP275_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20725;old_locus_tag=YPIP275_1290 NZ_AAOS02000028.1 Protein Homology CDS 51581 51919 . - 0 ID=cds-WP_002212019.1;Parent=gene-YPIP275_RS20725;Dbxref=GenBank:WP_002212019.1;Name=WP_002212019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312726.1;locus_tag=YPIP275_RS20725;product=MaoP family protein;protein_id=WP_002212019.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 52038 52919 . + . ID=gene-YPIP275_RS20730;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=YPIP275_RS20730;old_locus_tag=YPIP275_1292 NZ_AAOS02000028.1 Protein Homology CDS 52038 52919 . + 0 ID=cds-WP_002212020.1;Parent=gene-YPIP275_RS20730;Dbxref=GenBank:WP_002212020.1;Name=WP_002212020.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212020.1;locus_tag=YPIP275_RS20730;product=HTH-type transcriptional regulator HdfR;protein_id=WP_002212020.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 52906 53898 . - . ID=gene-YPIP275_RS20735;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=YPIP275_RS20735;old_locus_tag=YPIP275_1291 NZ_AAOS02000028.1 Protein Homology CDS 52906 53898 . - 0 ID=cds-WP_002212021.1;Parent=gene-YPIP275_RS20735;Dbxref=GenBank:WP_002212021.1;Name=WP_002212021.1;Ontology_term=GO:0042875,GO:0103116,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212021.1;locus_tag=YPIP275_RS20735;product=galactofuranose ABC transporter%2C permease protein YjfF;protein_id=WP_002212021.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 53898 54917 . - . ID=gene-YPIP275_RS20740;Name=ytfT;gbkey=Gene;gene=ytfT;gene_biotype=protein_coding;locus_tag=YPIP275_RS20740;old_locus_tag=YPIP275_1293 NZ_AAOS02000028.1 Protein Homology CDS 53898 54917 . - 0 ID=cds-WP_002212022.1;Parent=gene-YPIP275_RS20740;Dbxref=GenBank:WP_002212022.1;Name=WP_002212022.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfT;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212022.1;locus_tag=YPIP275_RS20740;product=galactofuranose ABC transporter%2C ATP-binding protein YtfT;protein_id=WP_002212022.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 54929 56419 . - . ID=gene-YPIP275_RS20745;Name=ytfR;gbkey=Gene;gene=ytfR;gene_biotype=protein_coding;locus_tag=YPIP275_RS20745;old_locus_tag=YPIP275_1294 NZ_AAOS02000028.1 Protein Homology CDS 54929 56419 . - 0 ID=cds-WP_002212023.1;Parent=gene-YPIP275_RS20745;Dbxref=GenBank:WP_002212023.1;Name=WP_002212023.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfR;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212023.1;locus_tag=YPIP275_RS20745;product=galactofuranose ABC transporter%2C ATP-binding protein YtfR;protein_id=WP_002212023.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 56505 57461 . - . ID=gene-YPIP275_RS20750;Name=ytfQ;gbkey=Gene;gene=ytfQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS20750;old_locus_tag=YPIP275_1295 NZ_AAOS02000028.1 Protein Homology CDS 56505 57461 . - 0 ID=cds-WP_002212024.1;Parent=gene-YPIP275_RS20750;Dbxref=GenBank:WP_002212024.1;Name=WP_002212024.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfQ;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134480.1;locus_tag=YPIP275_RS20750;product=galactofuranose ABC transporter%2C galactofuranose-binding protein YtfQ;protein_id=WP_002212024.1;transl_table=11 NZ_AAOS02000028.1 RefSeq gene 58439 58514 . - . ID=gene-YPIP275_RS20755;Name=YPIP275_RS20755;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS20755;old_locus_tag=YPIP275_1296 NZ_AAOS02000028.1 tRNAscan-SE tRNA 58439 58514 . - . ID=rna-YPIP275_RS20755;Parent=gene-YPIP275_RS20755;anticodon=(pos:complement(58479..58481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS20755;product=tRNA-Trp NZ_AAOS02000028.1 tRNAscan-SE exon 58439 58514 . - . ID=exon-YPIP275_RS20755-1;Parent=rna-YPIP275_RS20755;anticodon=(pos:complement(58479..58481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS20755;product=tRNA-Trp NZ_AAOS02000028.1 RefSeq gene 58523 58599 . - . ID=gene-YPIP275_RS20760;Name=YPIP275_RS20760;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS20760;old_locus_tag=YPIP275_1297 NZ_AAOS02000028.1 tRNAscan-SE tRNA 58523 58599 . - . ID=rna-YPIP275_RS20760;Parent=gene-YPIP275_RS20760;anticodon=(pos:complement(58563..58565));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS20760;product=tRNA-Asp NZ_AAOS02000028.1 tRNAscan-SE exon 58523 58599 . - . ID=exon-YPIP275_RS20760-1;Parent=rna-YPIP275_RS20760;anticodon=(pos:complement(58563..58565));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS20760;product=tRNA-Asp NZ_AAOS02000028.1 RefSeq gene 58725 58840 . - . ID=gene-YPIP275_RS20765;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=YPIP275_RS20765;old_locus_tag=YPIP275_1298 NZ_AAOS02000028.1 cmsearch rRNA 58725 58840 . - . ID=rna-YPIP275_RS20765;Parent=gene-YPIP275_RS20765;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS20765;product=5S ribosomal RNA NZ_AAOS02000028.1 cmsearch exon 58725 58840 . - . ID=exon-YPIP275_RS20765-1;Parent=rna-YPIP275_RS20765;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS20765;product=5S ribosomal RNA NZ_AAOS02000028.1 RefSeq gene 58950 61856 . - . ID=gene-YPIP275_RS20770;Name=YPIP275_RS20770;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPIP275_RS20770;old_locus_tag=YPIP275_1299 NZ_AAOS02000028.1 cmsearch rRNA 58950 61856 . - . ID=rna-YPIP275_RS20770;Parent=gene-YPIP275_RS20770;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS20770;product=23S ribosomal RNA NZ_AAOS02000028.1 cmsearch exon 58950 61856 . - . ID=exon-YPIP275_RS20770-1;Parent=rna-YPIP275_RS20770;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS20770;product=23S ribosomal RNA ##sequence-region NZ_AAOS02000027.1 1 70324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000027.1 RefSeq region 1 70324 . + . ID=NZ_AAOS02000027.1:1..70324;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000027.1 RefSeq gene 1 1107 . + . ID=gene-YPIP275_RS20200;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=YPIP275_RS20200;old_locus_tag=YPIP275_0118;partial=true;start_range=.,1 NZ_AAOS02000027.1 Protein Homology CDS 1 1107 . + 0 ID=cds-WP_002210016.1-2;Parent=gene-YPIP275_RS20200;Dbxref=GenBank:WP_002210016.1;Name=WP_002210016.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213011.1;locus_tag=YPIP275_RS20200;partial=true;product=type VI secretion system baseplate subunit TssK;protein_id=WP_002210016.1;start_range=.,1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 1104 1790 . + . ID=gene-YPIP275_RS20205;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=YPIP275_RS20205;old_locus_tag=YPIP275_0119 NZ_AAOS02000027.1 Protein Homology CDS 1104 1790 . + 0 ID=cds-WP_002210015.1-3;Parent=gene-YPIP275_RS20205;Dbxref=GenBank:WP_002210015.1;Name=WP_002210015.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104585.1;locus_tag=YPIP275_RS20205;product=type VI secretion system protein TssL%2C short form;protein_id=WP_002210015.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 1790 3526 . + . ID=gene-YPIP275_RS20210;Name=YPIP275_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20210;old_locus_tag=YPIP275_0120 NZ_AAOS02000027.1 Protein Homology CDS 1790 3526 . + 0 ID=cds-WP_002214568.1;Parent=gene-YPIP275_RS20210;Dbxref=GenBank:WP_002214568.1;Name=WP_002214568.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683668.1;locus_tag=YPIP275_RS20210;product=OmpA family protein;protein_id=WP_002214568.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 3530 4021 . + . ID=gene-YPIP275_RS20215;Name=YPIP275_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20215;old_locus_tag=YPIP275_0121 NZ_AAOS02000027.1 Protein Homology CDS 3530 4021 . + 0 ID=cds-WP_002210014.1;Parent=gene-YPIP275_RS20215;Dbxref=GenBank:WP_002210014.1;Name=WP_002210014.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226602.1;locus_tag=YPIP275_RS20215;product=Hcp family type VI secretion system effector;protein_id=WP_002210014.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 4409 7051 . + . ID=gene-YPIP275_RS20220;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=YPIP275_RS20220;old_locus_tag=YPIP275_0122 NZ_AAOS02000027.1 Protein Homology CDS 4409 7051 . + 0 ID=cds-WP_002211927.1;Parent=gene-YPIP275_RS20220;Dbxref=GenBank:WP_002211927.1;Name=WP_002211927.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303637.1;locus_tag=YPIP275_RS20220;product=type VI secretion system ATPase TssH;protein_id=WP_002211927.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 7054 9402 . + . ID=gene-YPIP275_RS20225;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=YPIP275_RS20225;old_locus_tag=YPIP275_0123 NZ_AAOS02000027.1 Protein Homology CDS 7054 9402 . + 0 ID=cds-WP_002211928.1;Parent=gene-YPIP275_RS20225;Dbxref=GenBank:WP_002211928.1;Name=WP_002211928.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683911.1;locus_tag=YPIP275_RS20225;product=type VI secretion system tip protein VgrG;protein_id=WP_002211928.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 9418 11718 . + . ID=gene-YPIP275_RS20230;Name=YPIP275_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20230;old_locus_tag=YPIP275_0124 NZ_AAOS02000027.1 Protein Homology CDS 9418 11718 . + 0 ID=cds-WP_002211929.1;Parent=gene-YPIP275_RS20230;Dbxref=GenBank:WP_002211929.1;Name=WP_002211929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211929.1;locus_tag=YPIP275_RS20230;product=M23 family metallopeptidase;protein_id=WP_002211929.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 11715 12488 . + . ID=gene-YPIP275_RS20235;Name=YPIP275_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20235;old_locus_tag=YPIP275_0125 NZ_AAOS02000027.1 Protein Homology CDS 11715 12488 . + 0 ID=cds-WP_002211930.1;Parent=gene-YPIP275_RS20235;Dbxref=GenBank:WP_002211930.1;Name=WP_002211930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211930.1;locus_tag=YPIP275_RS20235;product=hypothetical protein;protein_id=WP_002211930.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 12642 12902 . + . ID=gene-YPIP275_RS20240;Name=YPIP275_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20240;old_locus_tag=YPIP275_0126 NZ_AAOS02000027.1 Protein Homology CDS 12642 12902 . + 0 ID=cds-WP_002211931.1;Parent=gene-YPIP275_RS20240;Dbxref=GenBank:WP_002211931.1;Name=WP_002211931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002376836.1;locus_tag=YPIP275_RS20240;product=DUF2345 domain-containing protein;protein_id=WP_002211931.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 12918 15101 . + . ID=gene-YPIP275_RS20245;Name=YPIP275_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20245;old_locus_tag=YPIP275_0127 NZ_AAOS02000027.1 Protein Homology CDS 12918 15101 . + 0 ID=cds-WP_002211932.1;Parent=gene-YPIP275_RS20245;Dbxref=GenBank:WP_002211932.1;Name=WP_002211932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211932.1;locus_tag=YPIP275_RS20245;product=M23 family metallopeptidase;protein_id=WP_002211932.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 15274 15744 . + . ID=gene-YPIP275_RS20250;Name=YPIP275_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20250 NZ_AAOS02000027.1 Protein Homology CDS 15274 15744 . + 0 ID=cds-WP_002214564.1;Parent=gene-YPIP275_RS20250;Dbxref=GenBank:WP_002214564.1;Name=WP_002214564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214564.1;locus_tag=YPIP275_RS20250;product=hypothetical protein;protein_id=WP_002214564.1;transl_table=11 NZ_AAOS02000027.1 RefSeq pseudogene 16209 17079 . - . ID=gene-YPIP275_RS27855;Name=YPIP275_RS27855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS27855;pseudo=true NZ_AAOS02000027.1 Protein Homology CDS 16209 17079 . - 0 ID=cds-YPIP275_RS27855;Parent=gene-YPIP275_RS27855;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146697.1;locus_tag=YPIP275_RS27855;product=transposase;pseudo=true;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 17909 19141 . + . ID=gene-YPIP275_RS20260;Name=YPIP275_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20260;old_locus_tag=YPIP275_0133 NZ_AAOS02000027.1 Protein Homology CDS 17909 19141 . + 0 ID=cds-WP_002211935.1;Parent=gene-YPIP275_RS20260;Dbxref=GenBank:WP_002211935.1;Name=WP_002211935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674153.1;locus_tag=YPIP275_RS20260;product=KPHS_23130 family T6SS system protein;protein_id=WP_002211935.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 19138 22560 . + . ID=gene-YPIP275_RS20265;Name=YPIP275_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20265;old_locus_tag=YPIP275_0134 NZ_AAOS02000027.1 Protein Homology CDS 19138 22560 . + 0 ID=cds-WP_002211936.1;Parent=gene-YPIP275_RS20265;Dbxref=GenBank:WP_002211936.1;Name=WP_002211936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211936.1;locus_tag=YPIP275_RS20265;product=ImcF-related family protein;protein_id=WP_002211936.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 22604 24205 . + . ID=gene-YPIP275_RS20270;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=YPIP275_RS20270;old_locus_tag=YPIP275_0135 NZ_AAOS02000027.1 Protein Homology CDS 22604 24205 . + 0 ID=cds-WP_002211937.1;Parent=gene-YPIP275_RS20270;Dbxref=GenBank:WP_002211937.1;Name=WP_002211937.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211937.1;locus_tag=YPIP275_RS20270;product=type VI secretion system protein TssA;protein_id=WP_002211937.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 24223 25281 . + . ID=gene-YPIP275_RS20275;Name=tseR;gbkey=Gene;gene=tseR;gene_biotype=protein_coding;locus_tag=YPIP275_RS20275;old_locus_tag=YPIP275_0136 NZ_AAOS02000027.1 Protein Homology CDS 24223 25281 . + 0 ID=cds-WP_002211938.1;Parent=gene-YPIP275_RS20275;Dbxref=GenBank:WP_002211938.1;Name=WP_002211938.1;gbkey=CDS;gene=tseR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211938.1;locus_tag=YPIP275_RS20275;product=T6SS effector RNase TseR;protein_id=WP_002211938.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 25281 25751 . + . ID=gene-YPIP275_RS20280;Name=tsiR;gbkey=Gene;gene=tsiR;gene_biotype=protein_coding;locus_tag=YPIP275_RS20280;old_locus_tag=YPIP275_0137 NZ_AAOS02000027.1 Protein Homology CDS 25281 25751 . + 0 ID=cds-WP_002214554.1;Parent=gene-YPIP275_RS20280;Dbxref=GenBank:WP_002214554.1;Name=WP_002214554.1;gbkey=CDS;gene=tsiR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214554.1;locus_tag=YPIP275_RS20280;product=immunity protein TsiR;protein_id=WP_002214554.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 25972 27735 . + . ID=gene-YPIP275_RS20285;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=YPIP275_RS20285;old_locus_tag=YPIP275_0138 NZ_AAOS02000027.1 Protein Homology CDS 25972 27735 . + 0 ID=cds-WP_002211940.1;Parent=gene-YPIP275_RS20285;Dbxref=GenBank:WP_002211940.1;Name=WP_002211940.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536307.1;locus_tag=YPIP275_RS20285;product=type VI secretion system baseplate subunit TssF;protein_id=WP_002211940.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 27699 28784 . + . ID=gene-YPIP275_RS20290;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=YPIP275_RS20290;old_locus_tag=YPIP275_0139 NZ_AAOS02000027.1 Protein Homology CDS 27699 28784 . + 0 ID=cds-WP_002211941.1;Parent=gene-YPIP275_RS20290;Dbxref=GenBank:WP_002211941.1;Name=WP_002211941.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674055.1;locus_tag=YPIP275_RS20290;product=type VI secretion system baseplate subunit TssG;protein_id=WP_002211941.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 28759 29340 . + . ID=gene-YPIP275_RS20295;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS20295;old_locus_tag=YPIP275_0140 NZ_AAOS02000027.1 Protein Homology CDS 28759 29340 . + 0 ID=cds-WP_002214552.1;Parent=gene-YPIP275_RS20295;Dbxref=GenBank:WP_002214552.1;Name=WP_002214552.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214552.1;locus_tag=YPIP275_RS20295;product=type VI secretion system lipoprotein TssJ;protein_id=WP_002214552.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 29340 29792 . + . ID=gene-YPIP275_RS20300;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=YPIP275_RS20300;old_locus_tag=YPIP275_0141 NZ_AAOS02000027.1 Protein Homology CDS 29340 29792 . + 0 ID=cds-WP_002211943.1;Parent=gene-YPIP275_RS20300;Dbxref=GenBank:WP_002211943.1;Name=WP_002211943.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192093.1;locus_tag=YPIP275_RS20300;product=type VI secretion system baseplate subunit TssE;protein_id=WP_002211943.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 29817 31184 . + . ID=gene-YPIP275_RS20305;Name=YPIP275_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20305;old_locus_tag=YPIP275_0142 NZ_AAOS02000027.1 Protein Homology CDS 29817 31184 . + 0 ID=cds-WP_002211944.1;Parent=gene-YPIP275_RS20305;Dbxref=GenBank:WP_002211944.1;Name=WP_002211944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304269.1;locus_tag=YPIP275_RS20305;product=VasL domain-containing protein;protein_id=WP_002211944.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 31396 32019 . - . ID=gene-YPIP275_RS20310;Name=YPIP275_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20310;old_locus_tag=YPIP275_0143 NZ_AAOS02000027.1 Protein Homology CDS 31396 32019 . - 0 ID=cds-WP_002211945.1;Parent=gene-YPIP275_RS20310;Dbxref=GenBank:WP_002211945.1;Name=WP_002211945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105340.1;locus_tag=YPIP275_RS20310;product=NleF caspase inhibitor;protein_id=WP_002211945.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 32702 34297 . + . ID=gene-YPIP275_RS20315;Name=YPIP275_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20315;old_locus_tag=YPIP275_0144 NZ_AAOS02000027.1 Protein Homology CDS 32702 34297 . + 0 ID=cds-WP_002227996.1;Parent=gene-YPIP275_RS20315;Dbxref=GenBank:WP_002227996.1;Name=WP_002227996.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227996.1;locus_tag=YPIP275_RS20315;product=ABC-F family ATPase;protein_id=WP_002227996.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 34525 35178 . + . ID=gene-YPIP275_RS20320;Name=YPIP275_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20320;old_locus_tag=YPIP275_0145 NZ_AAOS02000027.1 Protein Homology CDS 34525 35178 . + 0 ID=cds-WP_002211947.1;Parent=gene-YPIP275_RS20320;Dbxref=GenBank:WP_002211947.1;Name=WP_002211947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211947.1;locus_tag=YPIP275_RS20320;product=NleF caspase inhibitor;protein_id=WP_002211947.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 35222 36430 . - . ID=gene-YPIP275_RS20325;Name=YPIP275_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20325;old_locus_tag=YPIP275_0146 NZ_AAOS02000027.1 Protein Homology CDS 35222 36430 . - 0 ID=cds-WP_002209743.1-6;Parent=gene-YPIP275_RS20325;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS20325;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 36566 37336 . - . ID=gene-YPIP275_RS20330;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=YPIP275_RS20330;old_locus_tag=YPIP275_0147 NZ_AAOS02000027.1 Protein Homology CDS 36566 37336 . - 0 ID=cds-WP_002211948.1;Parent=gene-YPIP275_RS20330;Dbxref=GenBank:WP_002211948.1;Name=WP_002211948.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211948.1;locus_tag=YPIP275_RS20330;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_002211948.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 37338 38612 . - . ID=gene-YPIP275_RS20335;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=YPIP275_RS20335;old_locus_tag=YPIP275_0148 NZ_AAOS02000027.1 Protein Homology CDS 37338 38612 . - 0 ID=cds-WP_002211949.1;Parent=gene-YPIP275_RS20335;Dbxref=GenBank:WP_002211949.1;Name=WP_002211949.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304265.1;locus_tag=YPIP275_RS20335;product=molybdopterin molybdotransferase MoeA;protein_id=WP_002211949.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 39147 40457 . - . ID=gene-YPIP275_RS20340;Name=darE;gbkey=Gene;gene=darE;gene_biotype=protein_coding;locus_tag=YPIP275_RS20340;old_locus_tag=YPIP275_0149 NZ_AAOS02000027.1 Protein Homology CDS 39147 40457 . - 0 ID=cds-WP_002211950.1;Parent=gene-YPIP275_RS20340;Dbxref=GenBank:WP_002211950.1;Name=WP_002211950.1;gbkey=CDS;gene=darE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016581226.1;locus_tag=YPIP275_RS20340;product=darobactin maturation radical SAM/SPASM protein DarE;protein_id=WP_002211950.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 40467 41135 . - . ID=gene-YPIP275_RS20345;Name=darD;gbkey=Gene;gene=darD;gene_biotype=protein_coding;locus_tag=YPIP275_RS20345;old_locus_tag=YPIP275_0150 NZ_AAOS02000027.1 Protein Homology CDS 40467 41135 . - 0 ID=cds-WP_002211951.1;Parent=gene-YPIP275_RS20345;Dbxref=GenBank:WP_002211951.1;Name=WP_002211951.1;gbkey=CDS;gene=darD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105336.1;locus_tag=YPIP275_RS20345;product=darobactin export ABC transporter ATP-binding protein;protein_id=WP_002211951.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 41137 42399 . - . ID=gene-YPIP275_RS20350;Name=darC;gbkey=Gene;gene=darC;gene_biotype=protein_coding;locus_tag=YPIP275_RS20350;old_locus_tag=YPIP275_0151 NZ_AAOS02000027.1 Protein Homology CDS 41137 42399 . - 0 ID=cds-WP_002211952.1;Parent=gene-YPIP275_RS20350;Dbxref=GenBank:WP_002211952.1;Name=WP_002211952.1;gbkey=CDS;gene=darC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211952.1;locus_tag=YPIP275_RS20350;product=darobactin export ABC transporter periplasmic adaptor subunit;protein_id=WP_002211952.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 42401 44761 . - . ID=gene-YPIP275_RS20355;Name=darB;gbkey=Gene;gene=darB;gene_biotype=protein_coding;locus_tag=YPIP275_RS20355;old_locus_tag=YPIP275_0152 NZ_AAOS02000027.1 Protein Homology CDS 42401 44761 . - 0 ID=cds-WP_002215886.1;Parent=gene-YPIP275_RS20355;Dbxref=GenBank:WP_002215886.1;Name=WP_002215886.1;gbkey=CDS;gene=darB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215886.1;locus_tag=YPIP275_RS20355;product=darobactin export ABC transporter permease subunit;protein_id=WP_002215886.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 44845 45057 . - . ID=gene-YPIP275_RS20360;Name=darA-c;gbkey=Gene;gene=darA-c;gene_biotype=protein_coding;locus_tag=YPIP275_RS20360;old_locus_tag=YPIP275_0153 NZ_AAOS02000027.1 Protein Homology CDS 44845 45057 . - 0 ID=cds-WP_002227980.1;Parent=gene-YPIP275_RS20360;Dbxref=GenBank:WP_002227980.1;Name=WP_002227980.1;gbkey=CDS;gene=darA-c;inference=COORDINATES: similar to AA sequence:RefSeq:WP_140263806.1;locus_tag=YPIP275_RS20360;product=peptide antibiotic darobactin C;protein_id=WP_002227980.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 45314 46156 . - . ID=gene-YPIP275_RS20365;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=YPIP275_RS20365;old_locus_tag=YPIP275_0155 NZ_AAOS02000027.1 Protein Homology CDS 45314 46156 . - 0 ID=cds-WP_002211956.1;Parent=gene-YPIP275_RS20365;Dbxref=GenBank:WP_002211956.1;Name=WP_002211956.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192103.1;locus_tag=YPIP275_RS20365;product=S-formylglutathione hydrolase;protein_id=WP_002211956.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 46177 47316 . - . ID=gene-YPIP275_RS20370;Name=YPIP275_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20370;old_locus_tag=YPIP275_0156 NZ_AAOS02000027.1 Protein Homology CDS 46177 47316 . - 0 ID=cds-WP_002211957.1;Parent=gene-YPIP275_RS20370;Dbxref=GenBank:WP_002211957.1;Name=WP_002211957.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211957.1;locus_tag=YPIP275_RS20370;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_002211957.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 47590 48459 . - . ID=gene-YPIP275_RS20375;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=YPIP275_RS20375;old_locus_tag=YPIP275_0157 NZ_AAOS02000027.1 Protein Homology CDS 47590 48459 . - 0 ID=cds-WP_002211958.1;Parent=gene-YPIP275_RS20375;Dbxref=GenBank:WP_002211958.1;Name=WP_002211958.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211958.1;locus_tag=YPIP275_RS20375;product=putrescine utilization regulator PtrR;protein_id=WP_002211958.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 48595 49746 . + . ID=gene-YPIP275_RS20380;Name=YPIP275_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20380;old_locus_tag=YPIP275_0158 NZ_AAOS02000027.1 Protein Homology CDS 48595 49746 . + 0 ID=cds-WP_002211959.1;Parent=gene-YPIP275_RS20380;Dbxref=GenBank:WP_002211959.1;Name=WP_002211959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264795.1;locus_tag=YPIP275_RS20380;product=YbfB/YjiJ family MFS transporter;protein_id=WP_002211959.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 49930 50592 . + . ID=gene-YPIP275_RS20385;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=YPIP275_RS20385;old_locus_tag=YPIP275_0159 NZ_AAOS02000027.1 Protein Homology CDS 49930 50592 . + 0 ID=cds-WP_002211960.1;Parent=gene-YPIP275_RS20385;Dbxref=GenBank:WP_002211960.1;Name=WP_002211960.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211960.1;locus_tag=YPIP275_RS20385;product=GTP cyclohydrolase I FolE;protein_id=WP_002211960.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 50647 51813 . + . ID=gene-YPIP275_RS20390;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=YPIP275_RS20390;old_locus_tag=YPIP275_0160 NZ_AAOS02000027.1 Protein Homology CDS 50647 51813 . + 0 ID=cds-WP_002211961.1;Parent=gene-YPIP275_RS20390;Dbxref=GenBank:WP_002211961.1;Name=WP_002211961.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413631.1;locus_tag=YPIP275_RS20390;product=DUF418 domain-containing protein YeiB;protein_id=WP_002211961.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 52561 53553 . + . ID=gene-YPIP275_RS20395;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=YPIP275_RS20395;old_locus_tag=YPIP275_0162 NZ_AAOS02000027.1 Protein Homology CDS 52561 53553 . + 0 ID=cds-WP_002211963.1;Parent=gene-YPIP275_RS20395;Dbxref=GenBank:WP_002211963.1;Name=WP_002211963.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005168257.1;locus_tag=YPIP275_RS20395;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_002211963.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 53783 55303 . + . ID=gene-YPIP275_RS20400;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=YPIP275_RS20400;old_locus_tag=YPIP275_0163 NZ_AAOS02000027.1 Protein Homology CDS 53783 55303 . + 0 ID=cds-WP_002211964.1;Parent=gene-YPIP275_RS20400;Dbxref=GenBank:WP_002211964.1;Name=WP_002211964.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211964.1;locus_tag=YPIP275_RS20400;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_002211964.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 55324 56334 . + . ID=gene-YPIP275_RS20405;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=YPIP275_RS20405;old_locus_tag=YPIP275_0164 NZ_AAOS02000027.1 Protein Homology CDS 55324 56334 . + 0 ID=cds-WP_002211965.1;Parent=gene-YPIP275_RS20405;Dbxref=GenBank:WP_002211965.1;Name=WP_002211965.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416653.1;locus_tag=YPIP275_RS20405;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_002211965.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 56779 57516 . - . ID=gene-YPIP275_RS20410;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=YPIP275_RS20410;old_locus_tag=YPIP275_0165 NZ_AAOS02000027.1 Protein Homology CDS 56779 57516 . - 0 ID=cds-WP_002211966.1;Parent=gene-YPIP275_RS20410;Dbxref=GenBank:WP_002211966.1;Name=WP_002211966.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211966.1;locus_tag=YPIP275_RS20410;product=outer membrane permeability protein SanA;protein_id=WP_002211966.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 57797 59494 . - . ID=gene-YPIP275_RS20415;Name=YPIP275_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20415;old_locus_tag=YPIP275_0167 NZ_AAOS02000027.1 Protein Homology CDS 57797 59494 . - 0 ID=cds-WP_002211968.1;Parent=gene-YPIP275_RS20415;Dbxref=GenBank:WP_002211968.1;Name=WP_002211968.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015835025.1;locus_tag=YPIP275_RS20415;product=NAD-dependent malic enzyme;protein_id=WP_002211968.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 59850 60734 . - . ID=gene-YPIP275_RS20420;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=YPIP275_RS20420;old_locus_tag=YPIP275_0168 NZ_AAOS02000027.1 Protein Homology CDS 59850 60734 . - 0 ID=cds-WP_002211969.1;Parent=gene-YPIP275_RS20420;Dbxref=GenBank:WP_002211969.1;Name=WP_002211969.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230213.1;locus_tag=YPIP275_RS20420;product=cytidine deaminase;protein_id=WP_002211969.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 61060 61755 . - . ID=gene-YPIP275_RS20425;Name=YPIP275_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20425;old_locus_tag=YPIP275_0169 NZ_AAOS02000027.1 Protein Homology CDS 61060 61755 . - 0 ID=cds-WP_002211970.1;Parent=gene-YPIP275_RS20425;Dbxref=GenBank:WP_002211970.1;Name=WP_002211970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192107.1;locus_tag=YPIP275_RS20425;product=CidB/LrgB family autolysis modulator;protein_id=WP_002211970.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 61752 62159 . - . ID=gene-YPIP275_RS20430;Name=YPIP275_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20430;old_locus_tag=YPIP275_0170 NZ_AAOS02000027.1 Protein Homology CDS 61752 62159 . - 0 ID=cds-WP_002211971.1;Parent=gene-YPIP275_RS20430;Dbxref=GenBank:WP_002211971.1;Name=WP_002211971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211971.1;locus_tag=YPIP275_RS20430;product=CidA/LrgA family protein;protein_id=WP_002211971.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 62401 63582 . - . ID=gene-YPIP275_RS20435;Name=YPIP275_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20435;old_locus_tag=YPIP275_0172 NZ_AAOS02000027.1 Protein Homology CDS 62401 63582 . - 0 ID=cds-WP_002211973.1;Parent=gene-YPIP275_RS20435;Dbxref=GenBank:WP_002211973.1;Name=WP_002211973.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211973.1;locus_tag=YPIP275_RS20435;product=MFS transporter;protein_id=WP_002211973.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 63915 65168 . - . ID=gene-YPIP275_RS20440;Name=YPIP275_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20440;old_locus_tag=YPIP275_0173 NZ_AAOS02000027.1 Protein Homology CDS 63915 65168 . - 0 ID=cds-WP_002211974.1;Parent=gene-YPIP275_RS20440;Dbxref=GenBank:WP_002211974.1;Name=WP_002211974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192108.1;locus_tag=YPIP275_RS20440;product=LVIVD repeat-containing protein;protein_id=WP_002211974.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 65186 66262 . - . ID=gene-YPIP275_RS20445;Name=YPIP275_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20445;old_locus_tag=YPIP275_0174 NZ_AAOS02000027.1 Protein Homology CDS 65186 66262 . - 0 ID=cds-WP_002211975.1;Parent=gene-YPIP275_RS20445;Dbxref=GenBank:WP_002211975.1;Name=WP_002211975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211975.1;locus_tag=YPIP275_RS20445;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002211975.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 66960 67622 . + . ID=gene-YPIP275_RS20450;Name=YPIP275_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20450;old_locus_tag=YPIP275_0175 NZ_AAOS02000027.1 Protein Homology CDS 66960 67622 . + 0 ID=cds-WP_002228565.1;Parent=gene-YPIP275_RS20450;Dbxref=GenBank:WP_002228565.1;Name=WP_002228565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228565.1;locus_tag=YPIP275_RS20450;product=hypothetical protein;protein_id=WP_002228565.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 67887 68669 . - . ID=gene-YPIP275_RS20460;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS20460;old_locus_tag=YPIP275_0177 NZ_AAOS02000027.1 Protein Homology CDS 67887 68669 . - 0 ID=cds-WP_001317493.1-10;Parent=gene-YPIP275_RS20460;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS20460;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 68666 69688 . - . ID=gene-YPIP275_RS20465;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS20465;old_locus_tag=YPIP275_0178 NZ_AAOS02000027.1 Protein Homology CDS 68666 69688 . - 0 ID=cds-WP_000255944.1-6;Parent=gene-YPIP275_RS20465;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS20465;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000027.1 RefSeq gene 69799 70257 . + . ID=gene-YPIP275_RS20470;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS20470;old_locus_tag=YPIP275_0179 NZ_AAOS02000027.1 Protein Homology CDS 69799 70257 . + 0 ID=cds-WP_002213775.1-11;Parent=gene-YPIP275_RS20470;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS20470;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 ##sequence-region NZ_AAOS02000026.1 1 70953 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000026.1 RefSeq region 1 70953 . + . ID=NZ_AAOS02000026.1:1..70953;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000026.1 RefSeq gene 172 954 . - . ID=gene-YPIP275_RS19915;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS19915;old_locus_tag=YPIP275_0403 NZ_AAOS02000026.1 Protein Homology CDS 172 954 . - 0 ID=cds-WP_001317493.1-11;Parent=gene-YPIP275_RS19915;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS19915;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 951 1973 . - . ID=gene-YPIP275_RS19920;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS19920;old_locus_tag=YPIP275_0404 NZ_AAOS02000026.1 Protein Homology CDS 951 1973 . - 0 ID=cds-WP_000255944.1-7;Parent=gene-YPIP275_RS19920;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS19920;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 2084 2542 . + . ID=gene-YPIP275_RS19925;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS19925;old_locus_tag=YPIP275_0405 NZ_AAOS02000026.1 Protein Homology CDS 2084 2542 . + 0 ID=cds-WP_002213775.1-12;Parent=gene-YPIP275_RS19925;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS19925;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 2706 4733 . - . ID=gene-YPIP275_RS19930;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=YPIP275_RS19930;old_locus_tag=YPIP275_0406 NZ_AAOS02000026.1 Protein Homology CDS 2706 4733 . - 0 ID=cds-WP_002211870.1;Parent=gene-YPIP275_RS19930;Dbxref=GenBank:WP_002211870.1;Name=WP_002211870.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015839562.1;locus_tag=YPIP275_RS19930;product=methionine--tRNA ligase;protein_id=WP_002211870.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 4998 6110 . + . ID=gene-YPIP275_RS19935;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=YPIP275_RS19935;old_locus_tag=YPIP275_0407 NZ_AAOS02000026.1 Protein Homology CDS 4998 6110 . + 0 ID=cds-WP_002211871.1;Parent=gene-YPIP275_RS19935;Dbxref=GenBank:WP_002211871.1;Name=WP_002211871.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211871.1;locus_tag=YPIP275_RS19935;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_002211871.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 6355 6996 . + . ID=gene-YPIP275_RS19940;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=YPIP275_RS19940;old_locus_tag=YPIP275_0408 NZ_AAOS02000026.1 Protein Homology CDS 6355 6996 . + 0 ID=cds-WP_002211872.1;Parent=gene-YPIP275_RS19940;Dbxref=GenBank:WP_002211872.1;Name=WP_002211872.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211872.1;locus_tag=YPIP275_RS19940;product=uridine kinase;protein_id=WP_002211872.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 7101 7682 . + . ID=gene-YPIP275_RS19945;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=YPIP275_RS19945;old_locus_tag=YPIP275_0409 NZ_AAOS02000026.1 Protein Homology CDS 7101 7682 . + 0 ID=cds-WP_002211873.1;Parent=gene-YPIP275_RS19945;Dbxref=GenBank:WP_002211873.1;Name=WP_002211873.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=YPIP275_RS19945;product=dCTP deaminase;protein_id=WP_002211873.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 7869 9725 . + . ID=gene-YPIP275_RS19950;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=YPIP275_RS19950;old_locus_tag=YPIP275_0410 NZ_AAOS02000026.1 Protein Homology CDS 7869 9725 . + 0 ID=cds-WP_002211874.1;Parent=gene-YPIP275_RS19950;Dbxref=GenBank:WP_002211874.1;Name=WP_002211874.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211874.1;locus_tag=YPIP275_RS19950;product=outer membrane assembly protein AsmA;protein_id=WP_002211874.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 9870 11456 . - . ID=gene-YPIP275_RS19955;Name=YPIP275_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19955;old_locus_tag=YPIP275_0411 NZ_AAOS02000026.1 Protein Homology CDS 9870 11456 . - 0 ID=cds-WP_002211875.1;Parent=gene-YPIP275_RS19955;Dbxref=GenBank:WP_002211875.1;Name=WP_002211875.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388775.1;locus_tag=YPIP275_RS19955;product=TerC family protein;protein_id=WP_002211875.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 11898 12677 . + . ID=gene-YPIP275_RS19960;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=YPIP275_RS19960;old_locus_tag=YPIP275_0412 NZ_AAOS02000026.1 Protein Homology CDS 11898 12677 . + 0 ID=cds-WP_002211876.1;Parent=gene-YPIP275_RS19960;Dbxref=GenBank:WP_002211876.1;Name=WP_002211876.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211876.1;locus_tag=YPIP275_RS19960;product=siderophore-iron reductase FhuF;protein_id=WP_002211876.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 12829 14376 . + . ID=gene-YPIP275_RS19965;Name=YPIP275_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19965;old_locus_tag=YPIP275_0413 NZ_AAOS02000026.1 Protein Homology CDS 12829 14376 . + 0 ID=cds-WP_002211877.1;Parent=gene-YPIP275_RS19965;Dbxref=GenBank:WP_002211877.1;Name=WP_002211877.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211877.1;locus_tag=YPIP275_RS19965;product=pyridoxal phosphate-dependent decarboxylase family protein;protein_id=WP_002211877.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 14411 15709 . + . ID=gene-YPIP275_RS19970;Name=YPIP275_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19970;old_locus_tag=YPIP275_0414 NZ_AAOS02000026.1 Protein Homology CDS 14411 15709 . + 0 ID=cds-WP_002211878.1;Parent=gene-YPIP275_RS19970;Dbxref=GenBank:WP_002211878.1;Name=WP_002211878.1;Ontology_term=GO:0004497;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016260125.1;locus_tag=YPIP275_RS19970;product=lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein;protein_id=WP_002211878.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 15709 16287 . + . ID=gene-YPIP275_RS19975;Name=YPIP275_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19975;old_locus_tag=YPIP275_0415 NZ_AAOS02000026.1 Protein Homology CDS 15709 16287 . + 0 ID=cds-WP_002214999.1;Parent=gene-YPIP275_RS19975;Dbxref=GenBank:WP_002214999.1;Name=WP_002214999.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214999.1;locus_tag=YPIP275_RS19975;product=GNAT family N-acetyltransferase;protein_id=WP_002214999.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 16284 18128 . + . ID=gene-YPIP275_RS19980;Name=YPIP275_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19980;old_locus_tag=YPIP275_0416 NZ_AAOS02000026.1 Protein Homology CDS 16284 18128 . + 0 ID=cds-WP_002215001.1;Parent=gene-YPIP275_RS19980;Dbxref=GenBank:WP_002215001.1;Name=WP_002215001.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105327.1;locus_tag=YPIP275_RS19980;product=IucA/IucC family protein;protein_id=WP_002215001.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 18237 19055 . - . ID=gene-YPIP275_RS19985;Name=YPIP275_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19985;old_locus_tag=YPIP275_0417 NZ_AAOS02000026.1 Protein Homology CDS 18237 19055 . - 0 ID=cds-WP_002211879.1;Parent=gene-YPIP275_RS19985;Dbxref=GenBank:WP_002211879.1;Name=WP_002211879.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211879.1;locus_tag=YPIP275_RS19985;product=ABC transporter ATP-binding protein;protein_id=WP_002211879.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 19082 20122 . - . ID=gene-YPIP275_RS19990;Name=YPIP275_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19990;old_locus_tag=YPIP275_0418 NZ_AAOS02000026.1 Protein Homology CDS 19082 20122 . - 0 ID=cds-WP_002211880.1;Parent=gene-YPIP275_RS19990;Dbxref=GenBank:WP_002211880.1;Name=WP_002211880.1;Ontology_term=GO:0006826,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105326.1;locus_tag=YPIP275_RS19990;product=FecCD family ABC transporter permease;protein_id=WP_002211880.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 20109 21149 . - . ID=gene-YPIP275_RS19995;Name=YPIP275_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19995;old_locus_tag=YPIP275_0419 NZ_AAOS02000026.1 Protein Homology CDS 20109 21149 . - 0 ID=cds-WP_002211881.1;Parent=gene-YPIP275_RS19995;Dbxref=GenBank:WP_002211881.1;Name=WP_002211881.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192115.1;locus_tag=YPIP275_RS19995;product=FecCD family ABC transporter permease;protein_id=WP_002211881.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 21146 22225 . - . ID=gene-YPIP275_RS20000;Name=YPIP275_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20000;old_locus_tag=YPIP275_0420 NZ_AAOS02000026.1 Protein Homology CDS 21146 22225 . - 0 ID=cds-WP_002211882.1;Parent=gene-YPIP275_RS20000;Dbxref=GenBank:WP_002211882.1;Name=WP_002211882.1;Ontology_term=GO:0015891,GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211882.1;locus_tag=YPIP275_RS20000;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_002211882.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 22315 24576 . - . ID=gene-YPIP275_RS20005;Name=YPIP275_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20005;old_locus_tag=YPIP275_0421 NZ_AAOS02000026.1 Protein Homology CDS 22315 24576 . - 0 ID=cds-WP_002211883.1;Parent=gene-YPIP275_RS20005;Dbxref=GenBank:WP_002211883.1;Name=WP_002211883.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105324.1;locus_tag=YPIP275_RS20005;product=TonB-dependent siderophore receptor;protein_id=WP_002211883.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 24789 26603 . - . ID=gene-YPIP275_RS20010;Name=YPIP275_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20010;old_locus_tag=YPIP275_0422 NZ_AAOS02000026.1 Protein Homology CDS 24789 26603 . - 0 ID=cds-WP_002211884.1;Parent=gene-YPIP275_RS20010;Dbxref=GenBank:WP_002211884.1;Name=WP_002211884.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211884.1;locus_tag=YPIP275_RS20010;product=IucA/IucC family protein;protein_id=WP_002211884.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 27549 28439 . + . ID=gene-YPIP275_RS20015;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=YPIP275_RS20015;old_locus_tag=YPIP275_0424 NZ_AAOS02000026.1 Protein Homology CDS 27549 28439 . + 0 ID=cds-WP_002211886.1;Parent=gene-YPIP275_RS20015;Dbxref=GenBank:WP_002211886.1;Name=WP_002211886.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211886.1;locus_tag=YPIP275_RS20015;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_002211886.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 28523 29416 . + . ID=gene-YPIP275_RS20020;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=YPIP275_RS20020;old_locus_tag=YPIP275_0425 NZ_AAOS02000026.1 Protein Homology CDS 28523 29416 . + 0 ID=cds-WP_002211887.1;Parent=gene-YPIP275_RS20020;Dbxref=GenBank:WP_002211887.1;Name=WP_002211887.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211887.1;locus_tag=YPIP275_RS20020;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_002211887.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 29802 31211 . + . ID=gene-YPIP275_RS20025;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=YPIP275_RS20025;old_locus_tag=YPIP275_0426 NZ_AAOS02000026.1 Protein Homology CDS 29802 31211 . + 0 ID=cds-WP_002211888.1;Parent=gene-YPIP275_RS20025;Dbxref=GenBank:WP_002211888.1;Name=WP_002211888.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gnd;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264784.1;locus_tag=YPIP275_RS20025;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_002211888.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 31411 32025 . - . ID=gene-YPIP275_RS20030;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=YPIP275_RS20030;old_locus_tag=YPIP275_0427 NZ_AAOS02000026.1 Protein Homology CDS 31411 32025 . - 0 ID=cds-WP_002211889.1;Parent=gene-YPIP275_RS20030;Dbxref=GenBank:WP_002211889.1;Name=WP_002211889.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211889.1;locus_tag=YPIP275_RS20030;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_002211889.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 32019 32795 . - . ID=gene-YPIP275_RS20035;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=YPIP275_RS20035;old_locus_tag=YPIP275_0428 NZ_AAOS02000026.1 Protein Homology CDS 32019 32795 . - 0 ID=cds-WP_002211890.1;Parent=gene-YPIP275_RS20035;Dbxref=GenBank:WP_002211890.1;Name=WP_002211890.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227842.1;locus_tag=YPIP275_RS20035;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_002211890.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 32777 33514 . - . ID=gene-YPIP275_RS20040;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=YPIP275_RS20040;old_locus_tag=YPIP275_0429 NZ_AAOS02000026.1 Protein Homology CDS 32777 33514 . - 0 ID=cds-WP_002211891.1;Parent=gene-YPIP275_RS20040;Dbxref=GenBank:WP_002211891.1;Name=WP_002211891.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171818.1;locus_tag=YPIP275_RS20040;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_002211891.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 33520 34110 . - . ID=gene-YPIP275_RS20045;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=YPIP275_RS20045;old_locus_tag=YPIP275_0430 NZ_AAOS02000026.1 Protein Homology CDS 33520 34110 . - 0 ID=cds-WP_002211892.1;Parent=gene-YPIP275_RS20045;Dbxref=GenBank:WP_002211892.1;Name=WP_002211892.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224715.1;locus_tag=YPIP275_RS20045;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_002211892.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 34110 35177 . - . ID=gene-YPIP275_RS20050;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=YPIP275_RS20050;old_locus_tag=YPIP275_0431 NZ_AAOS02000026.1 Protein Homology CDS 34110 35177 . - 0 ID=cds-WP_002211893.1;Parent=gene-YPIP275_RS20050;Dbxref=GenBank:WP_002211893.1;Name=WP_002211893.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211893.1;locus_tag=YPIP275_RS20050;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_002211893.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 35174 36322 . - . ID=gene-YPIP275_RS20055;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=YPIP275_RS20055;old_locus_tag=YPIP275_0432 NZ_AAOS02000026.1 Protein Homology CDS 35174 36322 . - 0 ID=cds-WP_002211894.1;Parent=gene-YPIP275_RS20055;Dbxref=GenBank:WP_002211894.1;Name=WP_002211894.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=L-histidinol-phosphate:2-oxoglutarate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304245.1;locus_tag=YPIP275_RS20055;product=histidinol-phosphate transaminase;protein_id=WP_002211894.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 36325 37656 . - . ID=gene-YPIP275_RS20060;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=YPIP275_RS20060;old_locus_tag=YPIP275_0433 NZ_AAOS02000026.1 Protein Homology CDS 36325 37656 . - 0 ID=cds-WP_002211895.1;Parent=gene-YPIP275_RS20060;Dbxref=GenBank:WP_002211895.1;Name=WP_002211895.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211895.1;locus_tag=YPIP275_RS20060;product=histidinol dehydrogenase;protein_id=WP_002211895.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 37660 38559 . - . ID=gene-YPIP275_RS20065;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=YPIP275_RS20065;old_locus_tag=YPIP275_0434 NZ_AAOS02000026.1 Protein Homology CDS 37660 38559 . - 0 ID=cds-WP_002211896.1;Parent=gene-YPIP275_RS20065;Dbxref=GenBank:WP_002211896.1;Name=WP_002211896.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=YPIP275_RS20065;product=ATP phosphoribosyltransferase;protein_id=WP_002211896.1;transl_table=11 NZ_AAOS02000026.1 cmsearch sequence_feature 38737 38866 . - . ID=id-NZ_AAOS02000026.1:38737..38866;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_AAOS02000026.1 RefSeq gene 38842 38889 . - . ID=gene-YPIP275_RS28930;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=YPIP275_RS28930 NZ_AAOS02000026.1 Protein Homology CDS 38842 38889 . - 0 ID=cds-WP_002231208.1;Parent=gene-YPIP275_RS28930;Dbxref=GenBank:WP_002231208.1;Name=WP_002231208.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=YPIP275_RS28930;product=his operon leader peptide;protein_id=WP_002231208.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 39265 40092 . + . ID=gene-YPIP275_RS20070;Name=YPIP275_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20070;old_locus_tag=YPIP275_0436 NZ_AAOS02000026.1 Protein Homology CDS 39265 40092 . + 0 ID=cds-WP_002211898.1;Parent=gene-YPIP275_RS20070;Dbxref=GenBank:WP_002211898.1;Name=WP_002211898.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211898.1;locus_tag=YPIP275_RS20070;product=SDR family oxidoreductase;protein_id=WP_002211898.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 40247 40537 . - . ID=gene-YPIP275_RS28935;Name=YPIP275_RS28935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28935;old_locus_tag=YPIP275_0437 NZ_AAOS02000026.1 Protein Homology CDS 40247 40537 . - 0 ID=cds-WP_157131899.1;Parent=gene-YPIP275_RS28935;Dbxref=GenBank:WP_157131899.1;Name=WP_157131899.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028005.8;locus_tag=YPIP275_RS28935;product=T6SS amidase immunity protein Tai4 family protein;protein_id=WP_157131899.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 40548 40661 . - . ID=gene-YPIP275_RS29270;Name=YPIP275_RS29270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29270 NZ_AAOS02000026.1 Protein Homology CDS 40548 40661 . - 0 ID=cds-WP_190947800.1;Parent=gene-YPIP275_RS29270;Dbxref=GenBank:WP_190947800.1;Name=WP_190947800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264692.1;locus_tag=YPIP275_RS29270;product=gluconate 5-dehydrogenase;protein_id=WP_190947800.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 40926 41921 . - . ID=gene-YPIP275_RS20080;Name=YPIP275_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20080;old_locus_tag=YPIP275_0438 NZ_AAOS02000026.1 Protein Homology CDS 40926 41921 . - 0 ID=cds-WP_002211900.1;Parent=gene-YPIP275_RS20080;Dbxref=GenBank:WP_002211900.1;Name=WP_002211900.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145935.1;locus_tag=YPIP275_RS20080;product=ABC transporter permease;protein_id=WP_002211900.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 41918 42607 . - . ID=gene-YPIP275_RS20085;Name=YPIP275_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20085;old_locus_tag=YPIP275_0439 NZ_AAOS02000026.1 Protein Homology CDS 41918 42607 . - 0 ID=cds-WP_002216310.1;Parent=gene-YPIP275_RS20085;Dbxref=GenBank:WP_002216310.1;Name=WP_002216310.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216310.1;locus_tag=YPIP275_RS20085;product=ATP-binding cassette domain-containing protein;protein_id=WP_002216310.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 42565 43458 . - . ID=gene-YPIP275_RS20090;Name=YPIP275_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20090;old_locus_tag=YPIP275_0440 NZ_AAOS02000026.1 Protein Homology CDS 42565 43458 . - 0 ID=cds-WP_002216311.1;Parent=gene-YPIP275_RS20090;Dbxref=GenBank:WP_002216311.1;Name=WP_002216311.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216311.1;locus_tag=YPIP275_RS20090;product=ATP-binding cassette domain-containing protein;protein_id=WP_002216311.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 43744 44835 . + . ID=gene-YPIP275_RS20095;Name=YPIP275_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20095;old_locus_tag=YPIP275_0441 NZ_AAOS02000026.1 Protein Homology CDS 43744 44835 . + 0 ID=cds-WP_002216312.1;Parent=gene-YPIP275_RS20095;Dbxref=GenBank:WP_002216312.1;Name=WP_002216312.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216312.1;locus_tag=YPIP275_RS20095;product=oxidoreductase;protein_id=WP_002216312.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 45090 45305 . + . ID=gene-YPIP275_RS20100;Name=YPIP275_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20100 NZ_AAOS02000026.1 Protein Homology CDS 45090 45305 . + 0 ID=cds-WP_002216313.1;Parent=gene-YPIP275_RS20100;Dbxref=GenBank:WP_002216313.1;Name=WP_002216313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216313.1;locus_tag=YPIP275_RS20100;product=hypothetical protein;protein_id=WP_002216313.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 45295 46686 . + . ID=gene-YPIP275_RS20105;Name=YPIP275_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20105;old_locus_tag=YPIP275_0442 NZ_AAOS02000026.1 Protein Homology CDS 45295 46686 . + 0 ID=cds-WP_002211902.1;Parent=gene-YPIP275_RS20105;Dbxref=GenBank:WP_002211902.1;Name=WP_002211902.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304242.1;locus_tag=YPIP275_RS20105;product=APC family permease;protein_id=WP_002211902.1;transl_table=11 NZ_AAOS02000026.1 RefSeq pseudogene 46734 46930 . - . ID=gene-YPIP275_RS28940;Name=YPIP275_RS28940;end_range=46930,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28940;partial=true;pseudo=true;start_range=.,46734 NZ_AAOS02000026.1 Protein Homology CDS 46734 46930 . - 0 ID=cds-YPIP275_RS28940;Parent=gene-YPIP275_RS28940;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=46930,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160242.1;locus_tag=YPIP275_RS28940;partial=true;product=aspartate:proton symporter;pseudo=true;start_range=.,46734;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 47423 48853 . - . ID=gene-YPIP275_RS20110;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=YPIP275_RS20110;old_locus_tag=YPIP275_0444 NZ_AAOS02000026.1 Protein Homology CDS 47423 48853 . - 0 ID=cds-WP_002211904.1;Parent=gene-YPIP275_RS20110;Dbxref=GenBank:WP_002211904.1;Name=WP_002211904.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713557.1;locus_tag=YPIP275_RS20110;product=exodeoxyribonuclease I;protein_id=WP_002211904.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 49146 50255 . + . ID=gene-YPIP275_RS20115;Name=YPIP275_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20115;old_locus_tag=YPIP275_0445 NZ_AAOS02000026.1 Protein Homology CDS 49146 50255 . + 0 ID=cds-WP_002211905.1;Parent=gene-YPIP275_RS20115;Dbxref=GenBank:WP_002211905.1;Name=WP_002211905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211905.1;locus_tag=YPIP275_RS20115;product=SDR family oxidoreductase;protein_id=WP_002211905.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 50689 51006 . + . ID=gene-YPIP275_RS20120;Name=tmaR;gbkey=Gene;gene=tmaR;gene_biotype=protein_coding;locus_tag=YPIP275_RS20120;old_locus_tag=YPIP275_0447 NZ_AAOS02000026.1 Protein Homology CDS 50689 51006 . + 0 ID=cds-WP_002217522.1;Parent=gene-YPIP275_RS20120;Dbxref=GenBank:WP_002217522.1;Name=WP_002217522.1;gbkey=CDS;gene=tmaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005967626.1;locus_tag=YPIP275_RS20120;product=PTS system regulator TmaR;protein_id=WP_002217522.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 51377 52585 . + . ID=gene-YPIP275_RS20125;Name=YPIP275_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20125;old_locus_tag=YPIP275_0449 NZ_AAOS02000026.1 Protein Homology CDS 51377 52585 . + 0 ID=cds-WP_002209743.1-7;Parent=gene-YPIP275_RS20125;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS20125;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 52548 55700 . - . ID=gene-YPIP275_RS20130;Name=YPIP275_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20130;old_locus_tag=YPIP275_0448 NZ_AAOS02000026.1 Protein Homology CDS 52548 55700 . - 0 ID=cds-WP_002216388.1;Parent=gene-YPIP275_RS20130;Dbxref=GenBank:WP_002216388.1;Name=WP_002216388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683661.1;locus_tag=YPIP275_RS20130;product=inverse autotransporter beta domain-containing protein;protein_id=WP_002216388.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 56725 58029 . + . ID=gene-YPIP275_RS20135;Name=YPIP275_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20135;old_locus_tag=YPIP275_0452 NZ_AAOS02000026.1 Protein Homology CDS 56725 58029 . + 0 ID=cds-WP_002211911.1;Parent=gene-YPIP275_RS20135;Dbxref=GenBank:WP_002211911.1;Name=WP_002211911.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211911.1;locus_tag=YPIP275_RS20135;product=MFS transporter;protein_id=WP_002211911.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 58038 58460 . - . ID=gene-YPIP275_RS20140;Name=YPIP275_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20140;old_locus_tag=YPIP275_0453 NZ_AAOS02000026.1 Protein Homology CDS 58038 58460 . - 0 ID=cds-WP_002211912.1;Parent=gene-YPIP275_RS20140;Dbxref=GenBank:WP_002211912.1;Name=WP_002211912.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413636.1;locus_tag=YPIP275_RS20140;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=WP_002211912.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 58888 59628 . + . ID=gene-YPIP275_RS20145;Name=YPIP275_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20145;old_locus_tag=YPIP275_0456 NZ_AAOS02000026.1 Protein Homology CDS 58888 59628 . + 0 ID=cds-WP_002211915.1;Parent=gene-YPIP275_RS20145;Dbxref=GenBank:WP_002211915.1;Name=WP_002211915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216393.1;locus_tag=YPIP275_RS20145;product=SDR family oxidoreductase;protein_id=WP_002211915.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 59676 60518 . + . ID=gene-YPIP275_RS20150;Name=YPIP275_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20150;old_locus_tag=YPIP275_0457 NZ_AAOS02000026.1 Protein Homology CDS 59676 60518 . + 0 ID=cds-WP_002211916.1;Parent=gene-YPIP275_RS20150;Dbxref=GenBank:WP_002211916.1;Name=WP_002211916.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192131.1;locus_tag=YPIP275_RS20150;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_002211916.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 60550 61827 . + . ID=gene-YPIP275_RS20155;Name=YPIP275_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20155;old_locus_tag=YPIP275_0458 NZ_AAOS02000026.1 Protein Homology CDS 60550 61827 . + 0 ID=cds-WP_002211917.1;Parent=gene-YPIP275_RS20155;Dbxref=GenBank:WP_002211917.1;Name=WP_002211917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211917.1;locus_tag=YPIP275_RS20155;product=L-fuconate dehydratase;protein_id=WP_002211917.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 62124 63269 . + . ID=gene-YPIP275_RS20160;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=YPIP275_RS20160;old_locus_tag=YPIP275_0460 NZ_AAOS02000026.1 Protein Homology CDS 62124 63269 . + 0 ID=cds-WP_002211919.1;Parent=gene-YPIP275_RS20160;Dbxref=GenBank:WP_002211919.1;Name=WP_002211919.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211919.1;locus_tag=YPIP275_RS20160;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_002211919.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 63474 64841 . - . ID=gene-YPIP275_RS20165;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=YPIP275_RS20165;old_locus_tag=YPIP275_0461 NZ_AAOS02000026.1 Protein Homology CDS 63474 64841 . - 0 ID=cds-WP_002211920.1;Parent=gene-YPIP275_RS20165;Dbxref=GenBank:WP_002211920.1;Name=WP_002211920.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016678504.1;locus_tag=YPIP275_RS20165;product=argininosuccinate synthase;protein_id=WP_002211920.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 65135 66565 . + . ID=gene-YPIP275_RS20170;Name=YPIP275_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20170;old_locus_tag=YPIP275_0462 NZ_AAOS02000026.1 Protein Homology CDS 65135 66565 . + 0 ID=cds-WP_002224723.1;Parent=gene-YPIP275_RS20170;Dbxref=GenBank:WP_002224723.1;Name=WP_002224723.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230723.1;locus_tag=YPIP275_RS20170;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_002224723.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 66593 67933 . - . ID=gene-YPIP275_RS20175;Name=YPIP275_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20175;old_locus_tag=YPIP275_0463 NZ_AAOS02000026.1 Protein Homology CDS 66593 67933 . - 0 ID=cds-WP_002211922.1;Parent=gene-YPIP275_RS20175;Dbxref=GenBank:WP_002211922.1;Name=WP_002211922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211922.1;locus_tag=YPIP275_RS20175;product=MFS transporter;protein_id=WP_002211922.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 67969 68850 . - . ID=gene-YPIP275_RS20180;Name=YPIP275_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20180;old_locus_tag=YPIP275_0464 NZ_AAOS02000026.1 Protein Homology CDS 67969 68850 . - 0 ID=cds-WP_002211923.1;Parent=gene-YPIP275_RS20180;Dbxref=GenBank:WP_002211923.1;Name=WP_002211923.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229477.1;locus_tag=YPIP275_RS20180;product=polysaccharide deacetylase family protein;protein_id=WP_002211923.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 69427 70122 . + . ID=gene-YPIP275_RS20185;Name=YPIP275_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20185;old_locus_tag=YPIP275_0466 NZ_AAOS02000026.1 Protein Homology CDS 69427 70122 . + 0 ID=cds-WP_002217591.1;Parent=gene-YPIP275_RS20185;Dbxref=GenBank:WP_002217591.1;Name=WP_002217591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217591.1;locus_tag=YPIP275_RS20185;product=hypothetical protein;protein_id=WP_002217591.1;transl_table=11 NZ_AAOS02000026.1 RefSeq gene 70212 70751 . + . ID=gene-YPIP275_RS20190;Name=YPIP275_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS20190;old_locus_tag=YPIP275_0467 NZ_AAOS02000026.1 Protein Homology CDS 70212 70751 . + 0 ID=cds-WP_002211926.1;Parent=gene-YPIP275_RS20190;Dbxref=GenBank:WP_002211926.1;Name=WP_002211926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=YPIP275_RS20190;product=DUF2058 domain-containing protein;protein_id=WP_002211926.1;transl_table=11 ##sequence-region NZ_AAOS02000025.1 1 73183 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000025.1 RefSeq region 1 73183 . + . ID=NZ_AAOS02000025.1:1..73183;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000025.1 RefSeq gene 56 292 . + . ID=gene-YPIP275_RS19540;Name=YPIP275_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19540;old_locus_tag=YPIP275_2348 NZ_AAOS02000025.1 Protein Homology CDS 56 292 . + 0 ID=cds-WP_002227902.1;Parent=gene-YPIP275_RS19540;Dbxref=GenBank:WP_002227902.1;Name=WP_002227902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157411.1;locus_tag=YPIP275_RS19540;product=major outer membrane lipoprotein;protein_id=WP_002227902.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 483 941 . + . ID=gene-YPIP275_RS19550;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS19550;old_locus_tag=YPIP275_2349 NZ_AAOS02000025.1 Protein Homology CDS 483 941 . + 0 ID=cds-WP_002213759.1-4;Parent=gene-YPIP275_RS19550;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS19550;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 1523 2545 . + . ID=gene-YPIP275_RS19555;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS19555;old_locus_tag=YPIP275_2350 NZ_AAOS02000025.1 Protein Homology CDS 1523 2545 . + 0 ID=cds-WP_000255944.1-8;Parent=gene-YPIP275_RS19555;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS19555;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 2542 3324 . + . ID=gene-YPIP275_RS19560;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS19560;old_locus_tag=YPIP275_2351 NZ_AAOS02000025.1 Protein Homology CDS 2542 3324 . + 0 ID=cds-WP_001317493.1-12;Parent=gene-YPIP275_RS19560;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS19560;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 3368 4387 . - . ID=gene-YPIP275_RS19565;Name=YPIP275_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19565;old_locus_tag=YPIP275_2352 NZ_AAOS02000025.1 Protein Homology CDS 3368 4387 . - 0 ID=cds-WP_002211803.1;Parent=gene-YPIP275_RS19565;Dbxref=GenBank:WP_002211803.1;Name=WP_002211803.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211803.1;locus_tag=YPIP275_RS19565;product=L%2CD-transpeptidase family protein;protein_id=WP_002211803.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 4658 5080 . - . ID=gene-YPIP275_RS19570;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=YPIP275_RS19570;old_locus_tag=YPIP275_2353 NZ_AAOS02000025.1 Protein Homology CDS 4658 5080 . - 0 ID=cds-WP_002211804.1;Parent=gene-YPIP275_RS19570;Dbxref=GenBank:WP_002211804.1;Name=WP_002211804.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211804.1;locus_tag=YPIP275_RS19570;product=cysteine desulfuration protein SufE;protein_id=WP_002211804.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 5169 6389 . - . ID=gene-YPIP275_RS19575;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=YPIP275_RS19575;old_locus_tag=YPIP275_2354 NZ_AAOS02000025.1 Protein Homology CDS 5169 6389 . - 0 ID=cds-WP_002211805.1;Parent=gene-YPIP275_RS19575;Dbxref=GenBank:WP_002211805.1;Name=WP_002211805.1;Ontology_term=GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229769.1;locus_tag=YPIP275_RS19575;product=cysteine desulfurase SufS;protein_id=WP_002211805.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 6386 7711 . - . ID=gene-YPIP275_RS19580;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=YPIP275_RS19580;old_locus_tag=YPIP275_2355 NZ_AAOS02000025.1 Protein Homology CDS 6386 7711 . - 0 ID=cds-WP_002211806.1;Parent=gene-YPIP275_RS19580;Dbxref=GenBank:WP_002211806.1;Name=WP_002211806.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211806.1;locus_tag=YPIP275_RS19580;product=Fe-S cluster assembly protein SufD;protein_id=WP_002211806.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 7686 8432 . - . ID=gene-YPIP275_RS19585;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=YPIP275_RS19585;old_locus_tag=YPIP275_2356 NZ_AAOS02000025.1 Protein Homology CDS 7686 8432 . - 0 ID=cds-WP_002211807.1;Parent=gene-YPIP275_RS19585;Dbxref=GenBank:WP_002211807.1;Name=WP_002211807.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112393.1;locus_tag=YPIP275_RS19585;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_002211807.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 8618 10129 . - . ID=gene-YPIP275_RS19590;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=YPIP275_RS19590;old_locus_tag=YPIP275_2357 NZ_AAOS02000025.1 Protein Homology CDS 8618 10129 . - 0 ID=cds-WP_002211808.1;Parent=gene-YPIP275_RS19590;Dbxref=GenBank:WP_002211808.1;Name=WP_002211808.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192536.1;locus_tag=YPIP275_RS19590;product=Fe-S cluster assembly protein SufB;protein_id=WP_002211808.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 10144 10515 . - . ID=gene-YPIP275_RS19595;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=YPIP275_RS19595;old_locus_tag=YPIP275_2358 NZ_AAOS02000025.1 Protein Homology CDS 10144 10515 . - 0 ID=cds-WP_002211809.1;Parent=gene-YPIP275_RS19595;Dbxref=GenBank:WP_002211809.1;Name=WP_002211809.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304022.1;locus_tag=YPIP275_RS19595;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_002211809.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 11110 11526 . - . ID=gene-YPIP275_RS19605;Name=YPIP275_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19605;old_locus_tag=YPIP275_2359 NZ_AAOS02000025.1 Protein Homology CDS 11110 11526 . - 0 ID=cds-WP_002211810.1;Parent=gene-YPIP275_RS19605;Dbxref=GenBank:WP_002211810.1;Name=WP_002211810.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005270288.1;locus_tag=YPIP275_RS19605;product=hotdog fold thioesterase;protein_id=WP_002211810.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 11648 14704 . - . ID=gene-YPIP275_RS19610;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS19610;old_locus_tag=YPIP275_2360 NZ_AAOS02000025.1 Protein Homology CDS 11648 14704 . - 0 ID=cds-WP_002211811.1;Parent=gene-YPIP275_RS19610;Dbxref=GenBank:WP_002211811.1;Name=WP_002211811.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169419.1;locus_tag=YPIP275_RS19610;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_002211811.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 15325 16428 . + . ID=gene-YPIP275_RS19615;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=YPIP275_RS19615;old_locus_tag=YPIP275_2361 NZ_AAOS02000025.1 Protein Homology CDS 15325 16428 . + 0 ID=cds-WP_002211812.1;Parent=gene-YPIP275_RS19615;Dbxref=GenBank:WP_002211812.1;Name=WP_002211812.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211812.1;locus_tag=YPIP275_RS19615;product=AI-2E family transporter YdiK;protein_id=WP_002211812.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 16691 16800 . + . ID=gene-YPIP275_RS27825;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=YPIP275_RS27825 NZ_AAOS02000025.1 cmsearch antisense_RNA 16691 16800 . + . ID=rna-YPIP275_RS27825;Parent=gene-YPIP275_RS27825;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS27825;product=antisense sRNA RprA NZ_AAOS02000025.1 cmsearch exon 16691 16800 . + . ID=exon-YPIP275_RS27825-1;Parent=rna-YPIP275_RS27825;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS27825;product=antisense sRNA RprA NZ_AAOS02000025.1 RefSeq gene 17027 19411 . - . ID=gene-YPIP275_RS19620;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=YPIP275_RS19620;old_locus_tag=YPIP275_2362 NZ_AAOS02000025.1 Protein Homology CDS 17027 19411 . - 0 ID=cds-WP_002211813.1;Parent=gene-YPIP275_RS19620;Dbxref=GenBank:WP_002211813.1;Name=WP_002211813.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211813.1;locus_tag=YPIP275_RS19620;product=phosphoenolpyruvate synthase;protein_id=WP_002211813.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 19748 20569 . + . ID=gene-YPIP275_RS19625;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=YPIP275_RS19625;old_locus_tag=YPIP275_2363 NZ_AAOS02000025.1 Protein Homology CDS 19748 20569 . + 0 ID=cds-WP_002211814.1;Parent=gene-YPIP275_RS19625;Dbxref=GenBank:WP_002211814.1;Name=WP_002211814.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927943.1;locus_tag=YPIP275_RS19625;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_002211814.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 20726 21772 . + . ID=gene-YPIP275_RS19630;Name=YPIP275_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19630;old_locus_tag=YPIP275_2364 NZ_AAOS02000025.1 Protein Homology CDS 20726 21772 . + 0 ID=cds-WP_002211815.1;Parent=gene-YPIP275_RS19630;Dbxref=GenBank:WP_002211815.1;Name=WP_002211815.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211815.1;locus_tag=YPIP275_RS19630;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_002211815.1;transl_table=11 NZ_AAOS02000025.1 RefSeq pseudogene 21941 23404 . - . ID=gene-YPIP275_RS19635;Name=YPIP275_RS19635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS19635;pseudo=true NZ_AAOS02000025.1 Protein Homology CDS 21941 23404 . - 0 ID=cds-YPIP275_RS19635;Parent=gene-YPIP275_RS19635;Note=internal stop;Ontology_term=GO:0000287,GO:0005524,GO:0070733;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192539.1;locus_tag=YPIP275_RS19635;product=protein adenylyltransferase SelO;pseudo=true;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 23456 24472 . - . ID=gene-YPIP275_RS19640;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;gene_synonym=lplJ;locus_tag=YPIP275_RS19640;old_locus_tag=YPIP275_2367 NZ_AAOS02000025.1 Protein Homology CDS 23456 24472 . - 0 ID=cds-WP_002211816.1;Parent=gene-YPIP275_RS19640;Dbxref=GenBank:WP_002211816.1;Name=WP_002211816.1;Ontology_term=GO:0009249,GO:0017118;gbkey=CDS;gene=lplA;go_function=lipoyltransferase activity|0017118||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005161531.1;locus_tag=YPIP275_RS19640;product=lipoate--protein ligase;protein_id=WP_002211816.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 24597 25061 . - . ID=gene-YPIP275_RS19645;Name=YPIP275_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19645;old_locus_tag=YPIP275_2368 NZ_AAOS02000025.1 Protein Homology CDS 24597 25061 . - 0 ID=cds-WP_002216102.1;Parent=gene-YPIP275_RS19645;Dbxref=GenBank:WP_002216102.1;Name=WP_002216102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216102.1;locus_tag=YPIP275_RS19645;product=NlpC/P60 family protein;protein_id=WP_002216102.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 25002 25184 . + . ID=gene-YPIP275_RS27830;Name=YPIP275_RS27830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27830;old_locus_tag=YPIP275_2369 NZ_AAOS02000025.1 Protein Homology CDS 25002 25184 . + 0 ID=cds-WP_002211818.1;Parent=gene-YPIP275_RS27830;Dbxref=GenBank:WP_002211818.1;Name=WP_002211818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211818.1;locus_tag=YPIP275_RS27830;product=hypothetical protein;protein_id=WP_002211818.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 25341 25727 . - . ID=gene-YPIP275_RS19650;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=YPIP275_RS19650;old_locus_tag=YPIP275_2370 NZ_AAOS02000025.1 Protein Homology CDS 25341 25727 . - 0 ID=cds-WP_002211819.1;Parent=gene-YPIP275_RS19650;Dbxref=GenBank:WP_002211819.1;Name=WP_002211819.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211819.1;locus_tag=YPIP275_RS19650;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_002211819.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 25724 26068 . - . ID=gene-YPIP275_RS19655;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=YPIP275_RS19655;old_locus_tag=YPIP275_2371 NZ_AAOS02000025.1 Protein Homology CDS 25724 26068 . - 0 ID=cds-WP_002211820.1;Parent=gene-YPIP275_RS19655;Dbxref=GenBank:WP_002211820.1;Name=WP_002211820.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016598707.1;locus_tag=YPIP275_RS19655;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_002211820.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 26065 27729 . - . ID=gene-YPIP275_RS19660;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=YPIP275_RS19660;old_locus_tag=YPIP275_2372 NZ_AAOS02000025.1 Protein Homology CDS 26065 27729 . - 0 ID=cds-WP_002211821.1;Parent=gene-YPIP275_RS19660;Dbxref=GenBank:WP_002211821.1;Name=WP_002211821.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304019.1;locus_tag=YPIP275_RS19660;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_002211821.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 27726 28631 . - . ID=gene-YPIP275_RS19665;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=YPIP275_RS19665;old_locus_tag=YPIP275_2373 NZ_AAOS02000025.1 Protein Homology CDS 27726 28631 . - 0 ID=cds-WP_002211822.1;Parent=gene-YPIP275_RS19665;Dbxref=GenBank:WP_002211822.1;Name=WP_002211822.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304018.1;locus_tag=YPIP275_RS19665;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_002211822.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 28628 30631 . - . ID=gene-YPIP275_RS19670;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=YPIP275_RS19670;old_locus_tag=YPIP275_2374 NZ_AAOS02000025.1 Protein Homology CDS 28628 30631 . - 0 ID=cds-WP_002211823.1;Parent=gene-YPIP275_RS19670;Dbxref=GenBank:WP_002211823.1;Name=WP_002211823.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304017.1;locus_tag=YPIP275_RS19670;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_002211823.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 30628 31611 . - . ID=gene-YPIP275_RS19675;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=YPIP275_RS19675;old_locus_tag=YPIP275_2375 NZ_AAOS02000025.1 Protein Homology CDS 30628 31611 . - 0 ID=cds-WP_002211824.1;Parent=gene-YPIP275_RS19675;Dbxref=GenBank:WP_002211824.1;Name=WP_002211824.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211824.1;locus_tag=YPIP275_RS19675;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_002211824.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 31598 32752 . - . ID=gene-YPIP275_RS19680;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=YPIP275_RS19680;old_locus_tag=YPIP275_2376 NZ_AAOS02000025.1 Protein Homology CDS 31598 32752 . - 0 ID=cds-WP_002211825.1;Parent=gene-YPIP275_RS19680;Dbxref=GenBank:WP_002211825.1;Name=WP_002211825.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874218.1;locus_tag=YPIP275_RS19680;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_002211825.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 33102 33860 . - . ID=gene-YPIP275_RS19685;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=YPIP275_RS19685;old_locus_tag=YPIP275_2377 NZ_AAOS02000025.1 Protein Homology CDS 33102 33860 . - 0 ID=cds-WP_002211826.1;Parent=gene-YPIP275_RS19685;Dbxref=GenBank:WP_002211826.1;Name=WP_002211826.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211826.1;locus_tag=YPIP275_RS19685;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_002211826.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 33885 34439 . - . ID=gene-YPIP275_RS19690;Name=YPIP275_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19690;old_locus_tag=YPIP275_2378 NZ_AAOS02000025.1 Protein Homology CDS 33885 34439 . - 0 ID=cds-WP_002211827.1;Parent=gene-YPIP275_RS19690;Dbxref=GenBank:WP_002211827.1;Name=WP_002211827.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211827.1;locus_tag=YPIP275_RS19690;product=glutathione peroxidase;protein_id=WP_002211827.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 34509 35516 . - . ID=gene-YPIP275_RS19695;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=YPIP275_RS19695;old_locus_tag=YPIP275_2379 NZ_AAOS02000025.1 Protein Homology CDS 34509 35516 . - 0 ID=cds-WP_002220283.1;Parent=gene-YPIP275_RS19695;Dbxref=GenBank:WP_002220283.1;Name=WP_002220283.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220283.1;locus_tag=YPIP275_RS19695;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_002220283.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 35743 36201 . - . ID=gene-YPIP275_RS19700;Name=YPIP275_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19700;old_locus_tag=YPIP275_2380 NZ_AAOS02000025.1 Protein Homology CDS 35743 36201 . - 0 ID=cds-WP_002211829.1;Parent=gene-YPIP275_RS19700;Dbxref=GenBank:WP_002211829.1;Name=WP_002211829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105022.1;locus_tag=YPIP275_RS19700;product=DUF2502 domain-containing protein;protein_id=WP_002211829.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 36535 36831 . - . ID=gene-YPIP275_RS19705;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=YPIP275_RS19705;old_locus_tag=YPIP275_2381 NZ_AAOS02000025.1 Protein Homology CDS 36535 36831 . - 0 ID=cds-WP_002211830.1;Parent=gene-YPIP275_RS19705;Dbxref=GenBank:WP_002211830.1;Name=WP_002211830.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=YPIP275_RS19705;product=integration host factor subunit alpha;protein_id=WP_002211830.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 36836 39223 . - . ID=gene-YPIP275_RS19710;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=YPIP275_RS19710;old_locus_tag=YPIP275_2382 NZ_AAOS02000025.1 Protein Homology CDS 36836 39223 . - 0 ID=cds-WP_002211831.1;Parent=gene-YPIP275_RS19710;Dbxref=GenBank:WP_002211831.1;Name=WP_002211831.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310447.1;locus_tag=YPIP275_RS19710;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_002211831.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 39237 40220 . - . ID=gene-YPIP275_RS19715;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=YPIP275_RS19715;old_locus_tag=YPIP275_2383 NZ_AAOS02000025.1 Protein Homology CDS 39237 40220 . - 0 ID=cds-WP_002211832.1;Parent=gene-YPIP275_RS19715;Dbxref=GenBank:WP_002211832.1;Name=WP_002211832.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=YPIP275_RS19715;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_002211832.1;transl_table=11 NZ_AAOS02000025.1 cmsearch sequence_feature 40503 40625 . - . ID=id-NZ_AAOS02000025.1:40503..40625;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_AAOS02000025.1 RefSeq gene 40577 40624 . - . ID=gene-YPIP275_RS28925;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=YPIP275_RS28925 NZ_AAOS02000025.1 Protein Homology CDS 40577 40624 . - 0 ID=cds-WP_152328947.1;Parent=gene-YPIP275_RS28925;Dbxref=GenBank:WP_152328947.1;Name=WP_152328947.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: protein motif:HMM:NF033686.1;locus_tag=YPIP275_RS28925;product=pheST operon leader peptide PheM;protein_id=WP_152328947.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 40719 41075 . - . ID=gene-YPIP275_RS19720;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=YPIP275_RS19720;old_locus_tag=YPIP275_2384 NZ_AAOS02000025.1 Protein Homology CDS 40719 41075 . - 0 ID=cds-WP_002211833.1;Parent=gene-YPIP275_RS19720;Dbxref=GenBank:WP_002211833.1;Name=WP_002211833.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009635878.1;locus_tag=YPIP275_RS19720;product=50S ribosomal protein L20;protein_id=WP_002211833.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 41113 41310 . - . ID=gene-YPIP275_RS19725;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=YPIP275_RS19725;old_locus_tag=YPIP275_2385 NZ_AAOS02000025.1 Protein Homology CDS 41113 41310 . - 0 ID=cds-WP_002211834.1;Parent=gene-YPIP275_RS19725;Dbxref=GenBank:WP_002211834.1;Name=WP_002211834.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=YPIP275_RS19725;product=50S ribosomal protein L35;protein_id=WP_002211834.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 41407 41958 . - . ID=gene-YPIP275_RS27835;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=YPIP275_RS27835 NZ_AAOS02000025.1 Protein Homology CDS 41407 41958 . - 0 ID=cds-WP_002227898.1;Parent=gene-YPIP275_RS27835;Dbxref=GenBank:WP_002227898.1;Name=WP_002227898.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=YPIP275_RS27835;product=translation initiation factor IF-3;protein_id=WP_002227898.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 41962 43890 . - . ID=gene-YPIP275_RS19735;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=YPIP275_RS19735;old_locus_tag=YPIP275_2387 NZ_AAOS02000025.1 Protein Homology CDS 41962 43890 . - 0 ID=cds-WP_002211836.1;Parent=gene-YPIP275_RS19735;Dbxref=GenBank:WP_002211836.1;Name=WP_002211836.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=YPIP275_RS19735;product=threonine--tRNA ligase;protein_id=WP_002211836.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 44281 44493 . + . ID=gene-YPIP275_RS19740;Name=YPIP275_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19740;old_locus_tag=YPIP275_2388 NZ_AAOS02000025.1 Protein Homology CDS 44281 44493 . + 0 ID=cds-WP_002216696.1;Parent=gene-YPIP275_RS19740;Dbxref=GenBank:WP_002216696.1;Name=WP_002216696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216696.1;locus_tag=YPIP275_RS19740;product=KTSC domain-containing protein;protein_id=WP_002216696.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 45252 45503 . - . ID=gene-YPIP275_RS19750;Name=YPIP275_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19750;old_locus_tag=YPIP275_2389 NZ_AAOS02000025.1 Protein Homology CDS 45252 45503 . - 0 ID=cds-WP_002211839.1;Parent=gene-YPIP275_RS19750;Dbxref=GenBank:WP_002211839.1;Name=WP_002211839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211839.1;locus_tag=YPIP275_RS19750;product=hypothetical protein;protein_id=WP_002211839.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 45822 46505 . + . ID=gene-YPIP275_RS19755;Name=YPIP275_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19755;old_locus_tag=YPIP275_2391 NZ_AAOS02000025.1 Protein Homology CDS 45822 46505 . + 0 ID=cds-WP_002211840.1;Parent=gene-YPIP275_RS19755;Dbxref=GenBank:WP_002211840.1;Name=WP_002211840.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211840.1;locus_tag=YPIP275_RS19755;product=MarC family NAAT transporter;protein_id=WP_002211840.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 46627 47289 . - . ID=gene-YPIP275_RS19760;Name=YPIP275_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19760;old_locus_tag=YPIP275_2392 NZ_AAOS02000025.1 Protein Homology CDS 46627 47289 . - 0 ID=cds-WP_002216686.1;Parent=gene-YPIP275_RS19760;Dbxref=GenBank:WP_002216686.1;Name=WP_002216686.1;Ontology_term=GO:0000270,GO:0071555,GO:0008933;gbkey=CDS;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216686.1;locus_tag=YPIP275_RS19760;product=transglycosylase SLT domain-containing protein;protein_id=WP_002216686.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 47501 48469 . + . ID=gene-YPIP275_RS19765;Name=yfeA;gbkey=Gene;gene=yfeA;gene_biotype=protein_coding;locus_tag=YPIP275_RS19765;old_locus_tag=YPIP275_2393 NZ_AAOS02000025.1 Protein Homology CDS 47501 48469 . + 0 ID=cds-WP_002211842.1;Parent=gene-YPIP275_RS19765;Dbxref=GenBank:WP_002211842.1;Name=WP_002211842.1;gbkey=CDS;gene=yfeA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211842.1;locus_tag=YPIP275_RS19765;product=iron/manganese ABC transporter substrate-binding protein YfeA;protein_id=WP_002211842.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 48466 49356 . + . ID=gene-YPIP275_RS19770;Name=yfeB;gbkey=Gene;gene=yfeB;gene_biotype=protein_coding;locus_tag=YPIP275_RS19770;old_locus_tag=YPIP275_2394 NZ_AAOS02000025.1 Protein Homology CDS 48466 49356 . + 0 ID=cds-WP_002211843.1;Parent=gene-YPIP275_RS19770;Dbxref=GenBank:WP_002211843.1;Name=WP_002211843.1;gbkey=CDS;gene=yfeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211843.1;locus_tag=YPIP275_RS19770;product=iron/manganese ABC transporter ATP-binding protein YfeB;protein_id=WP_002211843.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 49356 50240 . + . ID=gene-YPIP275_RS19775;Name=yfeC;gbkey=Gene;gene=yfeC;gene_biotype=protein_coding;locus_tag=YPIP275_RS19775;old_locus_tag=YPIP275_2395 NZ_AAOS02000025.1 Protein Homology CDS 49356 50240 . + 0 ID=cds-WP_002211844.1;Parent=gene-YPIP275_RS19775;Dbxref=GenBank:WP_002211844.1;Name=WP_002211844.1;gbkey=CDS;gene=yfeC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211844.1;locus_tag=YPIP275_RS19775;product=iron/manganese ABC transporter permease subunit YfeC;protein_id=WP_002211844.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 50237 51130 . + . ID=gene-YPIP275_RS19780;Name=yfeD;gbkey=Gene;gene=yfeD;gene_biotype=protein_coding;locus_tag=YPIP275_RS19780;old_locus_tag=YPIP275_2396 NZ_AAOS02000025.1 Protein Homology CDS 50237 51130 . + 0 ID=cds-WP_002211845.1;Parent=gene-YPIP275_RS19780;Dbxref=GenBank:WP_002211845.1;Name=WP_002211845.1;gbkey=CDS;gene=yfeD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_128129395.1;locus_tag=YPIP275_RS19780;product=iron/manganese ABC transporter permease subunit YfeD;protein_id=WP_002211845.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 51198 51410 . + . ID=gene-YPIP275_RS19785;Name=YPIP275_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19785 NZ_AAOS02000025.1 Protein Homology CDS 51198 51410 . + 0 ID=cds-WP_002216683.1;Parent=gene-YPIP275_RS19785;Dbxref=GenBank:WP_002216683.1;Name=WP_002216683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216683.1;locus_tag=YPIP275_RS19785;product=hypothetical protein;protein_id=WP_002216683.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 51435 52310 . + . ID=gene-YPIP275_RS19790;Name=YPIP275_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19790;old_locus_tag=YPIP275_2397 NZ_AAOS02000025.1 Protein Homology CDS 51435 52310 . + 0 ID=cds-WP_002211846.1;Parent=gene-YPIP275_RS19790;Dbxref=GenBank:WP_002211846.1;Name=WP_002211846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211846.1;locus_tag=YPIP275_RS19790;product=fructosamine kinase family protein;protein_id=WP_002211846.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 52439 52993 . - . ID=gene-YPIP275_RS19795;Name=YPIP275_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19795;old_locus_tag=YPIP275_2398 NZ_AAOS02000025.1 Protein Homology CDS 52439 52993 . - 0 ID=cds-WP_002211847.1;Parent=gene-YPIP275_RS19795;Dbxref=GenBank:WP_002211847.1;Name=WP_002211847.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211847.1;locus_tag=YPIP275_RS19795;product=YniB family protein;protein_id=WP_002211847.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 53404 54069 . + . ID=gene-YPIP275_RS19800;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=YPIP275_RS19800;old_locus_tag=YPIP275_2399 NZ_AAOS02000025.1 Protein Homology CDS 53404 54069 . + 0 ID=cds-WP_002211848.1;Parent=gene-YPIP275_RS19800;Dbxref=GenBank:WP_002211848.1;Name=WP_002211848.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875260.1;locus_tag=YPIP275_RS19800;product=hexitol phosphatase HxpB;protein_id=WP_002211848.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 54320 55528 . - . ID=gene-YPIP275_RS19805;Name=YPIP275_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19805;old_locus_tag=YPIP275_2401 NZ_AAOS02000025.1 Protein Homology CDS 54320 55528 . - 0 ID=cds-WP_002209743.1-8;Parent=gene-YPIP275_RS19805;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS19805;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 55889 57004 . + . ID=gene-YPIP275_RS19810;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=YPIP275_RS19810;old_locus_tag=YPIP275_2402 NZ_AAOS02000025.1 Protein Homology CDS 55889 57004 . + 0 ID=cds-WP_002211850.1;Parent=gene-YPIP275_RS19810;Dbxref=GenBank:WP_002211850.1;Name=WP_002211850.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211850.1;locus_tag=YPIP275_RS19810;product=N-methyl-L-tryptophan oxidase;protein_id=WP_002211850.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 57271 57885 . + . ID=gene-YPIP275_RS19815;Name=YPIP275_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19815;old_locus_tag=YPIP275_2403 NZ_AAOS02000025.1 Protein Homology CDS 57271 57885 . + 0 ID=cds-WP_002211851.1;Parent=gene-YPIP275_RS19815;Dbxref=GenBank:WP_002211851.1;Name=WP_002211851.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709664.1;locus_tag=YPIP275_RS19815;product=response regulator transcription factor;protein_id=WP_002211851.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 58250 58342 . + . ID=gene-YPIP275_RS27845;Name=YPIP275_RS27845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27845;old_locus_tag=YPIP275_2404 NZ_AAOS02000025.1 Protein Homology CDS 58250 58342 . + 0 ID=cds-WP_086017986.1;Parent=gene-YPIP275_RS27845;Dbxref=GenBank:WP_086017986.1;Name=WP_086017986.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022421.8;locus_tag=YPIP275_RS27845;product=DUF2770 family protein;protein_id=WP_086017986.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 58457 59515 . - . ID=gene-YPIP275_RS19820;Name=YPIP275_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19820;old_locus_tag=YPIP275_2405 NZ_AAOS02000025.1 Protein Homology CDS 58457 59515 . - 0 ID=cds-WP_002211853.1;Parent=gene-YPIP275_RS19820;Dbxref=GenBank:WP_002211853.1;Name=WP_002211853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211853.1;locus_tag=YPIP275_RS19820;product=AI-2E family transporter;protein_id=WP_002211853.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 59664 60731 . - . ID=gene-YPIP275_RS19825;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;gene_synonym=yceA;locus_tag=YPIP275_RS19825;old_locus_tag=YPIP275_2406 NZ_AAOS02000025.1 Protein Homology CDS 59664 60731 . - 0 ID=cds-WP_002211854.1;Parent=gene-YPIP275_RS19825;Dbxref=GenBank:WP_002211854.1;Name=WP_002211854.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhO;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211854.1;locus_tag=YPIP275_RS19825;product=oxygen-dependent tRNA uridine(34) hydroxylase TrhO;protein_id=WP_002211854.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 61090 61254 . - . ID=gene-YPIP275_RS19835;Name=YPIP275_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19835;old_locus_tag=YPIP275_2408 NZ_AAOS02000025.1 Protein Homology CDS 61090 61254 . - 0 ID=cds-WP_002211856.1;Parent=gene-YPIP275_RS19835;Dbxref=GenBank:WP_002211856.1;Name=WP_002211856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211856.1;locus_tag=YPIP275_RS19835;product=hypothetical protein;protein_id=WP_002211856.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 61782 62459 . - . ID=gene-YPIP275_RS19845;Name=YPIP275_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19845;old_locus_tag=YPIP275_2410 NZ_AAOS02000025.1 Protein Homology CDS 61782 62459 . - 0 ID=cds-WP_002211857.1;Parent=gene-YPIP275_RS19845;Dbxref=GenBank:WP_002211857.1;Name=WP_002211857.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211857.1;locus_tag=YPIP275_RS19845;product=DMT family transporter;protein_id=WP_002211857.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 62890 63534 . + . ID=gene-YPIP275_RS19850;Name=YPIP275_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19850;old_locus_tag=YPIP275_2412 NZ_AAOS02000025.1 Protein Homology CDS 62890 63534 . + 0 ID=cds-WP_002211858.1;Parent=gene-YPIP275_RS19850;Dbxref=GenBank:WP_002211858.1;Name=WP_002211858.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211858.1;locus_tag=YPIP275_RS19850;product=acyl-homoserine-lactone synthase;protein_id=WP_002211858.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 63527 64264 . - . ID=gene-YPIP275_RS19855;Name=YPIP275_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19855;old_locus_tag=YPIP275_2411 NZ_AAOS02000025.1 Protein Homology CDS 63527 64264 . - 0 ID=cds-WP_002211859.1;Parent=gene-YPIP275_RS19855;Dbxref=GenBank:WP_002211859.1;Name=WP_002211859.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005170826.1;locus_tag=YPIP275_RS19855;product=helix-turn-helix transcriptional regulator;protein_id=WP_002211859.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 64751 65677 . - . ID=gene-YPIP275_RS19860;Name=YPIP275_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19860;old_locus_tag=YPIP275_2413 NZ_AAOS02000025.1 Protein Homology CDS 64751 65677 . - 0 ID=cds-WP_002211861.1;Parent=gene-YPIP275_RS19860;Dbxref=GenBank:WP_002211861.1;Name=WP_002211861.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211861.1;locus_tag=YPIP275_RS19860;product=LysR family transcriptional regulator;protein_id=WP_002211861.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 66125 67483 . + . ID=gene-YPIP275_RS19870;Name=YPIP275_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19870;old_locus_tag=YPIP275_2416 NZ_AAOS02000025.1 Protein Homology CDS 66125 67483 . + 0 ID=cds-WP_002211863.1;Parent=gene-YPIP275_RS19870;Dbxref=GenBank:WP_002211863.1;Name=WP_002211863.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192621.1;locus_tag=YPIP275_RS19870;product=MFS transporter;protein_id=WP_002211863.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 67530 68033 . + . ID=gene-YPIP275_RS19875;Name=fae;gbkey=Gene;gene=fae;gene_biotype=protein_coding;locus_tag=YPIP275_RS19875;old_locus_tag=YPIP275_2417 NZ_AAOS02000025.1 Protein Homology CDS 67530 68033 . + 0 ID=cds-WP_002211864.1;Parent=gene-YPIP275_RS19875;Dbxref=GenBank:WP_002211864.1;Name=WP_002211864.1;Ontology_term=GO:0016051,GO:0016840;gbkey=CDS;gene=fae;go_function=carbon-nitrogen lyase activity|0016840||IEA;go_process=carbohydrate biosynthetic process|0016051||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211864.1;locus_tag=YPIP275_RS19875;product=formaldehyde-activating enzyme;protein_id=WP_002211864.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 68044 69063 . + . ID=gene-YPIP275_RS19880;Name=YPIP275_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19880;old_locus_tag=YPIP275_2418 NZ_AAOS02000025.1 Protein Homology CDS 68044 69063 . + 0 ID=cds-WP_002211865.1;Parent=gene-YPIP275_RS19880;Dbxref=GenBank:WP_002211865.1;Name=WP_002211865.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674094.1;locus_tag=YPIP275_RS19880;product=aldo/keto reductase;protein_id=WP_002211865.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 69141 69695 . - . ID=gene-YPIP275_RS19885;Name=cas6f;gbkey=Gene;gene=cas6f;gene_biotype=protein_coding;locus_tag=YPIP275_RS19885;old_locus_tag=YPIP275_2419 NZ_AAOS02000025.1 Protein Homology CDS 69141 69695 . - 0 ID=cds-WP_002211866.1;Parent=gene-YPIP275_RS19885;Dbxref=GenBank:WP_002211866.1;Name=WP_002211866.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas6f;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211866.1;locus_tag=YPIP275_RS19885;product=type I-F CRISPR-associated endoribonuclease Cas6/Csy4;protein_id=WP_002211866.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 69706 70710 . - . ID=gene-YPIP275_RS19890;Name=csy3;gbkey=Gene;gene=csy3;gene_biotype=protein_coding;locus_tag=YPIP275_RS19890;old_locus_tag=YPIP275_2420 NZ_AAOS02000025.1 Protein Homology CDS 69706 70710 . - 0 ID=cds-WP_002211867.1;Parent=gene-YPIP275_RS19890;Dbxref=GenBank:WP_002211867.1;Name=WP_002211867.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csy3;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211867.1;locus_tag=YPIP275_RS19890;product=type I-F CRISPR-associated protein Csy3;protein_id=WP_002211867.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 70728 71678 . - . ID=gene-YPIP275_RS19895;Name=csy2;gbkey=Gene;gene=csy2;gene_biotype=protein_coding;locus_tag=YPIP275_RS19895;old_locus_tag=YPIP275_2421 NZ_AAOS02000025.1 Protein Homology CDS 70728 71678 . - 0 ID=cds-WP_002211868.1;Parent=gene-YPIP275_RS19895;Dbxref=GenBank:WP_002211868.1;Name=WP_002211868.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csy2;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211868.1;locus_tag=YPIP275_RS19895;product=type I-F CRISPR-associated protein Csy2;protein_id=WP_002211868.1;transl_table=11 NZ_AAOS02000025.1 RefSeq gene 71675 73021 . - . ID=gene-YPIP275_RS19900;Name=csy1;gbkey=Gene;gene=csy1;gene_biotype=protein_coding;locus_tag=YPIP275_RS19900;old_locus_tag=YPIP275_2422 NZ_AAOS02000025.1 Protein Homology CDS 71675 73021 . - 0 ID=cds-WP_002222491.1;Parent=gene-YPIP275_RS19900;Dbxref=GenBank:WP_002222491.1;Name=WP_002222491.1;Ontology_term=GO:0043571;gbkey=CDS;gene=csy1;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229482.1;locus_tag=YPIP275_RS19900;product=type I-F CRISPR-associated protein Csy1;protein_id=WP_002222491.1;transl_table=11 ##sequence-region NZ_AAOS02000024.1 1 76750 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000024.1 RefSeq region 1 76750 . + . ID=NZ_AAOS02000024.1:1..76750;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000024.1 RefSeq pseudogene 1 847 . - . ID=gene-YPIP275_RS19145;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=YPIP275_RS19145;old_locus_tag=YPIP275_1012;partial=true;pseudo=true;start_range=.,1 NZ_AAOS02000024.1 Protein Homology CDS 1 847 . - 0 ID=cds-YPIP275_RS19145;Parent=gene-YPIP275_RS19145;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS19145;partial=true;product=IS21-like element IS100 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 971 2980 . - . ID=gene-YPIP275_RS19150;Name=YPIP275_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19150;old_locus_tag=YPIP275_1013 NZ_AAOS02000024.1 Protein Homology CDS 971 2980 . - 0 ID=cds-WP_002211744.1-3;Parent=gene-YPIP275_RS19150;Dbxref=GenBank:WP_002211744.1;Name=WP_002211744.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211744.1;locus_tag=YPIP275_RS19150;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_002211744.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 3053 3283 . - . ID=gene-YPIP275_RS19155;Name=YPIP275_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19155;old_locus_tag=YPIP275_1014 NZ_AAOS02000024.1 Protein Homology CDS 3053 3283 . - 0 ID=cds-WP_002211745.1-3;Parent=gene-YPIP275_RS19155;Dbxref=GenBank:WP_002211745.1;Name=WP_002211745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694200.1;locus_tag=YPIP275_RS19155;product=DUF905 domain-containing protein;protein_id=WP_002211745.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 3996 4502 . - . ID=gene-YPIP275_RS19160;Name=YPIP275_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19160;old_locus_tag=YPIP275_1015 NZ_AAOS02000024.1 Protein Homology CDS 3996 4502 . - 0 ID=cds-WP_002211746.1-3;Parent=gene-YPIP275_RS19160;Dbxref=GenBank:WP_002211746.1;Name=WP_002211746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000108571.1;locus_tag=YPIP275_RS19160;product=antirestriction protein ArdA;protein_id=WP_002211746.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 4901 5680 . - . ID=gene-YPIP275_RS19165;Name=YPIP275_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19165;old_locus_tag=YPIP275_1016 NZ_AAOS02000024.1 Protein Homology CDS 4901 5680 . - 0 ID=cds-WP_002211747.1-3;Parent=gene-YPIP275_RS19165;Dbxref=GenBank:WP_002211747.1;Name=WP_002211747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694197.1;locus_tag=YPIP275_RS19165;product=YubG family protein;protein_id=WP_002211747.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 5734 6153 . - . ID=gene-YPIP275_RS19170;Name=YPIP275_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19170;old_locus_tag=YPIP275_1017 NZ_AAOS02000024.1 Protein Homology CDS 5734 6153 . - 0 ID=cds-WP_002215082.1-3;Parent=gene-YPIP275_RS19170;Dbxref=GenBank:WP_002215082.1;Name=WP_002215082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000274511.1;locus_tag=YPIP275_RS19170;product=DUF1380 family protein;protein_id=WP_002215082.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 6164 6385 . - . ID=gene-YPIP275_RS19175;Name=YPIP275_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19175;old_locus_tag=YPIP275_1018 NZ_AAOS02000024.1 Protein Homology CDS 6164 6385 . - 0 ID=cds-WP_002211748.1-3;Parent=gene-YPIP275_RS19175;Dbxref=GenBank:WP_002211748.1;Name=WP_002211748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958723.1;locus_tag=YPIP275_RS19175;product=YubE family protein;protein_id=WP_002211748.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 6385 7062 . - . ID=gene-YPIP275_RS19180;Name=YPIP275_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19180;old_locus_tag=YPIP275_1019 NZ_AAOS02000024.1 Protein Homology CDS 6385 7062 . - 0 ID=cds-WP_002211749.1-3;Parent=gene-YPIP275_RS19180;Dbxref=GenBank:WP_002211749.1;Name=WP_002211749.1;Ontology_term=GO:0032259,GO:0003677,GO:0008168,GO:0008170,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,N-methyltransferase activity|0008170||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052645.1;locus_tag=YPIP275_RS19180;product=DNA methylase;protein_id=WP_002211749.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 7563 7763 . + . ID=gene-YPIP275_RS19185;Name=YPIP275_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19185;old_locus_tag=YPIP275_1020 NZ_AAOS02000024.1 Protein Homology CDS 7563 7763 . + 0 ID=cds-WP_002211750.1-3;Parent=gene-YPIP275_RS19185;Dbxref=GenBank:WP_002211750.1;Name=WP_002211750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694174.1;locus_tag=YPIP275_RS19185;product=hypothetical protein;protein_id=WP_002211750.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 7925 9316 . - . ID=gene-YPIP275_RS19190;Name=YPIP275_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19190;old_locus_tag=YPIP275_1021 NZ_AAOS02000024.1 Protein Homology CDS 7925 9316 . - 0 ID=cds-WP_002211751.1-3;Parent=gene-YPIP275_RS19190;Dbxref=GenBank:WP_002211751.1;Name=WP_002211751.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211751.1;locus_tag=YPIP275_RS19190;product=ATP-binding protein;protein_id=WP_002211751.1;transl_table=11 NZ_AAOS02000024.1 RefSeq pseudogene 9444 9564 . + . ID=gene-YPIP275_RS27780;Name=YPIP275_RS27780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS27780;old_locus_tag=YPIP275_1022;partial=true;pseudo=true;start_range=.,9444 NZ_AAOS02000024.1 Protein Homology CDS 9444 9564 . + 0 ID=cds-YPIP275_RS27780;Parent=gene-YPIP275_RS27780;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229773.1;locus_tag=YPIP275_RS27780;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,9444;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 9701 10672 . - . ID=gene-YPIP275_RS19195;Name=YPIP275_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19195;old_locus_tag=YPIP275_1023 NZ_AAOS02000024.1 Protein Homology CDS 9701 10672 . - 0 ID=cds-WP_002215070.1-3;Parent=gene-YPIP275_RS19195;Dbxref=GenBank:WP_002215070.1;Name=WP_002215070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215070.1;locus_tag=YPIP275_RS19195;product=ParB family protein;protein_id=WP_002215070.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 10669 11874 . - . ID=gene-YPIP275_RS19200;Name=YPIP275_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19200;old_locus_tag=YPIP275_1024 NZ_AAOS02000024.1 Protein Homology CDS 10669 11874 . - 0 ID=cds-WP_002211752.1-3;Parent=gene-YPIP275_RS19200;Dbxref=GenBank:WP_002211752.1;Name=WP_002211752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817637.1;locus_tag=YPIP275_RS19200;product=AAA family ATPase;protein_id=WP_002211752.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 12176 12403 . + . ID=gene-YPIP275_RS19205;Name=YPIP275_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19205;old_locus_tag=YPIP275_1025 NZ_AAOS02000024.1 Protein Homology CDS 12176 12403 . + 0 ID=cds-WP_002211753.1-3;Parent=gene-YPIP275_RS19205;Dbxref=GenBank:WP_002211753.1;Name=WP_002211753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211753.1;locus_tag=YPIP275_RS19205;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_002211753.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 12403 12729 . + . ID=gene-YPIP275_RS19210;Name=YPIP275_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19210 NZ_AAOS02000024.1 Protein Homology CDS 12403 12729 . + 0 ID=cds-WP_002215068.1-3;Parent=gene-YPIP275_RS19210;Dbxref=GenBank:WP_002215068.1;Name=WP_002215068.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215068.1;locus_tag=YPIP275_RS19210;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_002215068.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 12929 13549 . + . ID=gene-YPIP275_RS19215;Name=YPIP275_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19215;old_locus_tag=YPIP275_1026 NZ_AAOS02000024.1 Protein Homology CDS 12929 13549 . + 0 ID=cds-WP_002211754.1-3;Parent=gene-YPIP275_RS19215;Dbxref=GenBank:WP_002211754.1;Name=WP_002211754.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211754.1;locus_tag=YPIP275_RS19215;product=recombinase family protein;protein_id=WP_002211754.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 13615 14556 . + . ID=gene-YPIP275_RS19220;Name=YPIP275_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19220;old_locus_tag=YPIP275_1027 NZ_AAOS02000024.1 Protein Homology CDS 13615 14556 . + 0 ID=cds-WP_002215065.1-3;Parent=gene-YPIP275_RS19220;Dbxref=GenBank:WP_002215065.1;Name=WP_002215065.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004536,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA nuclease activity|0004536||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=YPIP275_RS19220;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_002215065.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 14579 14854 . - . ID=gene-YPIP275_RS19225;Name=YPIP275_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19225;old_locus_tag=YPIP275_1028 NZ_AAOS02000024.1 Protein Homology CDS 14579 14854 . - 0 ID=cds-WP_002211756.1-3;Parent=gene-YPIP275_RS19225;Dbxref=GenBank:WP_002211756.1;Name=WP_002211756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211756.1;locus_tag=YPIP275_RS19225;product=hypothetical protein;protein_id=WP_002211756.1;transl_table=11 NZ_AAOS02000024.1 RefSeq pseudogene 15410 15523 . + . ID=gene-YPIP275_RS29265;Name=YPIP275_RS29265;end_range=15523,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29265;partial=true;pseudo=true;start_range=.,15410 NZ_AAOS02000024.1 Protein Homology CDS 15410 15523 . + 0 ID=cds-YPIP275_RS29265;Parent=gene-YPIP275_RS29265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=15523,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001776118.1;locus_tag=YPIP275_RS29265;partial=true;product=MobC family replication-relaxation protein;pseudo=true;start_range=.,15410;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 15594 16082 . + . ID=gene-YPIP275_RS19230;Name=YPIP275_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19230;old_locus_tag=YPIP275_1029 NZ_AAOS02000024.1 Protein Homology CDS 15594 16082 . + 0 ID=cds-WP_002211757.1-3;Parent=gene-YPIP275_RS19230;Dbxref=GenBank:WP_002211757.1;Name=WP_002211757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666958.1;locus_tag=YPIP275_RS19230;product=phospholipase D family nuclease;protein_id=WP_002211757.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 16160 17923 . + . ID=gene-YPIP275_RS19235;Name=YPIP275_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19235;old_locus_tag=YPIP275_1030 NZ_AAOS02000024.1 Protein Homology CDS 16160 17923 . + 0 ID=cds-WP_002211758.1-3;Parent=gene-YPIP275_RS19235;Dbxref=GenBank:WP_002211758.1;Name=WP_002211758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211758.1;locus_tag=YPIP275_RS19235;product=phospholipase D-like domain-containing protein;protein_id=WP_002211758.1;transl_table=11 NZ_AAOS02000024.1 RefSeq pseudogene 18151 18623 . - . ID=gene-YPIP275_RS19240;Name=YPIP275_RS19240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS19240;old_locus_tag=YPIP275_1031;partial=true;pseudo=true;start_range=.,18151 NZ_AAOS02000024.1 Protein Homology CDS 18151 18623 . - 0 ID=cds-YPIP275_RS19240;Parent=gene-YPIP275_RS19240;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=YPIP275_RS19240;partial=true;product=reverse transcriptase domain-containing protein;pseudo=true;start_range=.,18151;transl_table=11 NZ_AAOS02000024.1 RefSeq pseudogene 19441 19707 . + . ID=gene-YPIP275_RS19245;Name=YPIP275_RS19245;end_range=19707,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS19245;old_locus_tag=YPIP275_1032;partial=true;pseudo=true;start_range=.,19441 NZ_AAOS02000024.1 Protein Homology CDS 19441 19707 . + 0 ID=cds-YPIP275_RS19245;Parent=gene-YPIP275_RS19245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=19707,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000728920.1;locus_tag=YPIP275_RS19245;partial=true;product=ISNCY family transposase;pseudo=true;start_range=.,19441;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 19999 21021 . - . ID=gene-YPIP275_RS19250;Name=YPIP275_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19250;old_locus_tag=YPIP275_1033 NZ_AAOS02000024.1 Protein Homology CDS 19999 21021 . - 0 ID=cds-WP_002211760.1-3;Parent=gene-YPIP275_RS19250;Dbxref=GenBank:WP_002211760.1;Name=WP_002211760.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612074.1;locus_tag=YPIP275_RS19250;product=IS110-like element IS1618 family transposase;protein_id=WP_002211760.1;transl_table=11 NZ_AAOS02000024.1 RefSeq pseudogene 21181 21455 . - . ID=gene-YPIP275_RS19255;Name=YPIP275_RS19255;end_range=21455,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS19255;partial=true;pseudo=true NZ_AAOS02000024.1 Protein Homology CDS 21181 21455 . - 0 ID=cds-YPIP275_RS19255;Parent=gene-YPIP275_RS19255;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=21455,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001239408.1;locus_tag=YPIP275_RS19255;partial=true;product=OLD family endonuclease;pseudo=true;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 21490 22698 . - . ID=gene-YPIP275_RS19260;Name=YPIP275_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19260;old_locus_tag=YPIP275_1034 NZ_AAOS02000024.1 Protein Homology CDS 21490 22698 . - 0 ID=cds-WP_002209743.1-9;Parent=gene-YPIP275_RS19260;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS19260;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 23047 23952 . - . ID=gene-YPIP275_RS19265;Name=caf1R;gbkey=Gene;gene=caf1R;gene_biotype=protein_coding;locus_tag=YPIP275_RS19265;old_locus_tag=YPIP275_1035 NZ_AAOS02000024.1 Protein Homology CDS 23047 23952 . - 0 ID=cds-WP_002211761.1;Parent=gene-YPIP275_RS19265;Dbxref=GenBank:WP_002211761.1;Name=WP_002211761.1;gbkey=CDS;gene=caf1R;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211761.1;locus_tag=YPIP275_RS19265;product=F1 operon transcriptional regulator Caf1R;protein_id=WP_002211761.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 24280 25056 . + . ID=gene-YPIP275_RS19270;Name=caf1M;gbkey=Gene;gene=caf1M;gene_biotype=protein_coding;locus_tag=YPIP275_RS19270;old_locus_tag=YPIP275_1036 NZ_AAOS02000024.1 Protein Homology CDS 24280 25056 . + 0 ID=cds-WP_002211762.1;Parent=gene-YPIP275_RS19270;Dbxref=GenBank:WP_002211762.1;Name=WP_002211762.1;gbkey=CDS;gene=caf1M;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211762.1;locus_tag=YPIP275_RS19270;product=F1 capsule chaperone Caf1M;protein_id=WP_002211762.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 25081 27582 . + . ID=gene-YPIP275_RS19275;Name=caf1A;gbkey=Gene;gene=caf1A;gene_biotype=protein_coding;locus_tag=YPIP275_RS19275;old_locus_tag=YPIP275_1037 NZ_AAOS02000024.1 Protein Homology CDS 25081 27582 . + 0 ID=cds-WP_002211763.1;Parent=gene-YPIP275_RS19275;Dbxref=GenBank:WP_002211763.1;Name=WP_002211763.1;gbkey=CDS;gene=caf1A;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211763.1;locus_tag=YPIP275_RS19275;product=F1 capsule-anchoring usher protein Caf1A;protein_id=WP_002211763.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 27663 28175 . + . ID=gene-YPIP275_RS19280;Name=caf1;gbkey=Gene;gene=caf1;gene_biotype=protein_coding;locus_tag=YPIP275_RS19280 NZ_AAOS02000024.1 Protein Homology CDS 27663 28175 . + 0 ID=cds-WP_002216410.1;Parent=gene-YPIP275_RS19280;Dbxref=GenBank:WP_002216410.1;Name=WP_002216410.1;gbkey=CDS;gene=caf1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216410.1;locus_tag=YPIP275_RS19280;product=F1 capsule protein Caf1;protein_id=WP_002216410.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 28935 30038 . + . ID=gene-YPIP275_RS19285;Name=YPIP275_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19285;old_locus_tag=YPIP275_1041 NZ_AAOS02000024.1 Protein Homology CDS 28935 30038 . + 0 ID=cds-WP_002353208.1;Parent=gene-YPIP275_RS19285;Dbxref=GenBank:WP_002353208.1;Name=WP_002353208.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220827.1;locus_tag=YPIP275_RS19285;product=tyrosine-type recombinase/integrase;protein_id=WP_002353208.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 30033 30419 . - . ID=gene-YPIP275_RS19290;Name=YPIP275_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19290;old_locus_tag=YPIP275_1040 NZ_AAOS02000024.1 Protein Homology CDS 30033 30419 . - 0 ID=cds-WP_002228802.1;Parent=gene-YPIP275_RS19290;Dbxref=GenBank:WP_002228802.1;Name=WP_002228802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228802.1;locus_tag=YPIP275_RS19290;product=hypothetical protein;protein_id=WP_002228802.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 30682 30894 . + . ID=gene-YPIP275_RS19295;Name=YPIP275_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19295 NZ_AAOS02000024.1 Protein Homology CDS 30682 30894 . + 0 ID=cds-WP_002228800.1;Parent=gene-YPIP275_RS19295;Dbxref=GenBank:WP_002228800.1;Name=WP_002228800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228800.1;locus_tag=YPIP275_RS19295;product=hypothetical protein;protein_id=WP_002228800.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 31004 33370 . + . ID=gene-YPIP275_RS19300;Name=YPIP275_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19300;old_locus_tag=YPIP275_1042 NZ_AAOS02000024.1 Protein Homology CDS 31004 33370 . + 0 ID=cds-WP_002211766.1;Parent=gene-YPIP275_RS19300;Dbxref=GenBank:WP_002211766.1;Name=WP_002211766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812566.1;locus_tag=YPIP275_RS19300;product=cobaltochelatase CobT-related protein;protein_id=WP_002211766.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 33467 34702 . + . ID=gene-YPIP275_RS19305;Name=YPIP275_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19305;old_locus_tag=YPIP275_1043 NZ_AAOS02000024.1 Protein Homology CDS 33467 34702 . + 0 ID=cds-WP_002211767.1;Parent=gene-YPIP275_RS19305;Dbxref=GenBank:WP_002211767.1;Name=WP_002211767.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004110112.1;locus_tag=YPIP275_RS19305;product=AAA family ATPase;protein_id=WP_002211767.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 34883 37996 . + . ID=gene-YPIP275_RS19310;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=YPIP275_RS19310;old_locus_tag=YPIP275_1044 NZ_AAOS02000024.1 Protein Homology CDS 34883 37996 . + 0 ID=cds-WP_002211768.1;Parent=gene-YPIP275_RS19310;Dbxref=GenBank:WP_002211768.1;Name=WP_002211768.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408,GO:0009360;gbkey=CDS;gene=dnaE;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016598629.1;locus_tag=YPIP275_RS19310;product=DNA polymerase III subunit alpha;protein_id=WP_002211768.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 38010 39032 . + . ID=gene-YPIP275_RS19315;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS19315;old_locus_tag=YPIP275_1045 NZ_AAOS02000024.1 Protein Homology CDS 38010 39032 . + 0 ID=cds-WP_000255944.1-9;Parent=gene-YPIP275_RS19315;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS19315;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 39029 39811 . + . ID=gene-YPIP275_RS19320;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS19320;old_locus_tag=YPIP275_1046 NZ_AAOS02000024.1 Protein Homology CDS 39029 39811 . + 0 ID=cds-WP_001317493.1-13;Parent=gene-YPIP275_RS19320;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS19320;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 39945 40553 . - . ID=gene-YPIP275_RS19325;Name=YPIP275_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19325;old_locus_tag=YPIP275_1047 NZ_AAOS02000024.1 Protein Homology CDS 39945 40553 . - 0 ID=cds-WP_002211769.1;Parent=gene-YPIP275_RS19325;Dbxref=GenBank:WP_002211769.1;Name=WP_002211769.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211769.1;locus_tag=YPIP275_RS19325;product=tail fiber assembly protein;protein_id=WP_002211769.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 40855 43743 . - . ID=gene-YPIP275_RS19335;Name=YPIP275_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19335;old_locus_tag=YPIP275_1048 NZ_AAOS02000024.1 Protein Homology CDS 40855 43743 . - 0 ID=cds-WP_002211770.1;Parent=gene-YPIP275_RS19335;Dbxref=GenBank:WP_002211770.1;Name=WP_002211770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674228.1;locus_tag=YPIP275_RS19335;product=phage tail protein;protein_id=WP_002211770.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 43824 44441 . - . ID=gene-YPIP275_RS19340;Name=YPIP275_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19340;old_locus_tag=YPIP275_1049 NZ_AAOS02000024.1 Protein Homology CDS 43824 44441 . - 0 ID=cds-WP_002228779.1;Parent=gene-YPIP275_RS19340;Dbxref=GenBank:WP_002228779.1;Name=WP_002228779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228779.1;locus_tag=YPIP275_RS19340;product=DUF4376 domain-containing protein;protein_id=WP_002228779.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 44459 49090 . - . ID=gene-YPIP275_RS19345;Name=YPIP275_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19345;old_locus_tag=YPIP275_1050 NZ_AAOS02000024.1 Protein Homology CDS 44459 49090 . - 0 ID=cds-WP_002211772.1;Parent=gene-YPIP275_RS19345;Dbxref=GenBank:WP_002211772.1;Name=WP_002211772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812505.1;locus_tag=YPIP275_RS19345;product=phage tail tip fiber protein;protein_id=WP_002211772.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 49112 49699 . - . ID=gene-YPIP275_RS19350;Name=YPIP275_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19350;old_locus_tag=YPIP275_1051 NZ_AAOS02000024.1 Protein Homology CDS 49112 49699 . - 0 ID=cds-WP_002211773.1;Parent=gene-YPIP275_RS19350;Dbxref=GenBank:WP_002211773.1;Name=WP_002211773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220869.1;locus_tag=YPIP275_RS19350;product=tail assembly protein;protein_id=WP_002211773.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 49687 50484 . - . ID=gene-YPIP275_RS19355;Name=YPIP275_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19355;old_locus_tag=YPIP275_1052 NZ_AAOS02000024.1 Protein Homology CDS 49687 50484 . - 0 ID=cds-WP_002211774.1;Parent=gene-YPIP275_RS19355;Dbxref=GenBank:WP_002211774.1;Name=WP_002211774.1;Ontology_term=GO:0006508,GO:0008233,GO:0008270,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220870.1;locus_tag=YPIP275_RS19355;product=C40 family peptidase;protein_id=WP_002211774.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 50477 51175 . - . ID=gene-YPIP275_RS19360;Name=YPIP275_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19360;old_locus_tag=YPIP275_1053 NZ_AAOS02000024.1 Protein Homology CDS 50477 51175 . - 0 ID=cds-WP_002211775.1;Parent=gene-YPIP275_RS19360;Dbxref=GenBank:WP_002211775.1;Name=WP_002211775.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016051624.1;locus_tag=YPIP275_RS19360;product=phage minor tail protein L;protein_id=WP_002211775.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 51265 51600 . - . ID=gene-YPIP275_RS19365;Name=YPIP275_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19365;old_locus_tag=YPIP275_1054 NZ_AAOS02000024.1 Protein Homology CDS 51265 51600 . - 0 ID=cds-WP_000440566.1;Parent=gene-YPIP275_RS19365;Dbxref=GenBank:WP_000440566.1;Name=WP_000440566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000440566.1;locus_tag=YPIP275_RS19365;product=phage tail protein;protein_id=WP_000440566.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 51642 56219 . - . ID=gene-YPIP275_RS19370;Name=YPIP275_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19370;old_locus_tag=YPIP275_1055 NZ_AAOS02000024.1 Protein Homology CDS 51642 56219 . - 0 ID=cds-WP_002211776.1;Parent=gene-YPIP275_RS19370;Dbxref=GenBank:WP_002211776.1;Name=WP_002211776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211776.1;locus_tag=YPIP275_RS19370;product=tape measure protein;protein_id=WP_002211776.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 56227 56451 . - . ID=gene-YPIP275_RS19375;Name=YPIP275_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19375;old_locus_tag=YPIP275_1056 NZ_AAOS02000024.1 Protein Homology CDS 56227 56451 . - 0 ID=cds-WP_000952684.1;Parent=gene-YPIP275_RS19375;Dbxref=GenBank:WP_000952684.1;Name=WP_000952684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220875.1;locus_tag=YPIP275_RS19375;product=hypothetical protein;protein_id=WP_000952684.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 56577 56894 . - . ID=gene-YPIP275_RS19385;Name=YPIP275_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19385;old_locus_tag=YPIP275_1057 NZ_AAOS02000024.1 Protein Homology CDS 56577 56894 . - 0 ID=cds-WP_000163862.1;Parent=gene-YPIP275_RS19385;Dbxref=GenBank:WP_000163862.1;Name=WP_000163862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220876.1;locus_tag=YPIP275_RS19385;product=hypothetical protein;protein_id=WP_000163862.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 56954 57700 . - . ID=gene-YPIP275_RS19390;Name=YPIP275_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19390;old_locus_tag=YPIP275_1058 NZ_AAOS02000024.1 Protein Homology CDS 56954 57700 . - 0 ID=cds-WP_002211778.1;Parent=gene-YPIP275_RS19390;Dbxref=GenBank:WP_002211778.1;Name=WP_002211778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016051620.1;locus_tag=YPIP275_RS19390;product=Ig-like domain-containing protein;protein_id=WP_002211778.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 57775 58158 . - . ID=gene-YPIP275_RS19395;Name=YPIP275_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19395;old_locus_tag=YPIP275_1059 NZ_AAOS02000024.1 Protein Homology CDS 57775 58158 . - 0 ID=cds-WP_002211779.1;Parent=gene-YPIP275_RS19395;Dbxref=GenBank:WP_002211779.1;Name=WP_002211779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211779.1;locus_tag=YPIP275_RS19395;product=minor capsid protein;protein_id=WP_002211779.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 58160 58633 . - . ID=gene-YPIP275_RS19400;Name=YPIP275_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19400;old_locus_tag=YPIP275_1060 NZ_AAOS02000024.1 Protein Homology CDS 58160 58633 . - 0 ID=cds-WP_002211780.1;Parent=gene-YPIP275_RS19400;Dbxref=GenBank:WP_002211780.1;Name=WP_002211780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220879.1;locus_tag=YPIP275_RS19400;product=hypothetical protein;protein_id=WP_002211780.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 58624 58968 . - . ID=gene-YPIP275_RS19405;Name=YPIP275_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19405;old_locus_tag=YPIP275_1061 NZ_AAOS02000024.1 Protein Homology CDS 58624 58968 . - 0 ID=cds-WP_001027662.1;Parent=gene-YPIP275_RS19405;Dbxref=GenBank:WP_001027662.1;Name=WP_001027662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220880.1;locus_tag=YPIP275_RS19405;product=hypothetical protein;protein_id=WP_001027662.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 59066 59899 . - . ID=gene-YPIP275_RS19410;Name=YPIP275_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19410;old_locus_tag=YPIP275_1062 NZ_AAOS02000024.1 Protein Homology CDS 59066 59899 . - 0 ID=cds-WP_002211781.1;Parent=gene-YPIP275_RS19410;Dbxref=GenBank:WP_002211781.1;Name=WP_002211781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220881.1;locus_tag=YPIP275_RS19410;product=hypothetical protein;protein_id=WP_002211781.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 59899 60333 . - . ID=gene-YPIP275_RS19415;Name=YPIP275_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19415;old_locus_tag=YPIP275_1063 NZ_AAOS02000024.1 Protein Homology CDS 59899 60333 . - 0 ID=cds-WP_002211782.1;Parent=gene-YPIP275_RS19415;Dbxref=GenBank:WP_002211782.1;Name=WP_002211782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812512.1;locus_tag=YPIP275_RS19415;product=hypothetical protein;protein_id=WP_002211782.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 60377 61039 . - . ID=gene-YPIP275_RS19420;Name=YPIP275_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19420;old_locus_tag=YPIP275_1064 NZ_AAOS02000024.1 Protein Homology CDS 60377 61039 . - 0 ID=cds-WP_002211783.1;Parent=gene-YPIP275_RS19420;Dbxref=GenBank:WP_002211783.1;Name=WP_002211783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211783.1;locus_tag=YPIP275_RS19420;product=Ig-like domain-containing protein;protein_id=WP_002211783.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 61114 61989 . - . ID=gene-YPIP275_RS19425;Name=YPIP275_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19425;old_locus_tag=YPIP275_1065 NZ_AAOS02000024.1 Protein Homology CDS 61114 61989 . - 0 ID=cds-WP_002211784.1;Parent=gene-YPIP275_RS19425;Dbxref=GenBank:WP_002211784.1;Name=WP_002211784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220885.1;locus_tag=YPIP275_RS19425;product=major capsid protein;protein_id=WP_002211784.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 62016 62849 . - . ID=gene-YPIP275_RS19430;Name=YPIP275_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19430;old_locus_tag=YPIP275_1066 NZ_AAOS02000024.1 Protein Homology CDS 62016 62849 . - 0 ID=cds-WP_002211785.1;Parent=gene-YPIP275_RS19430;Dbxref=GenBank:WP_002211785.1;Name=WP_002211785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220886.1;locus_tag=YPIP275_RS19430;product=DUF6651 domain-containing protein;protein_id=WP_002211785.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 62872 64446 . - . ID=gene-YPIP275_RS19435;Name=YPIP275_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19435;old_locus_tag=YPIP275_1067 NZ_AAOS02000024.1 Protein Homology CDS 62872 64446 . - 0 ID=cds-WP_002211786.1;Parent=gene-YPIP275_RS19435;Dbxref=GenBank:WP_002211786.1;Name=WP_002211786.1;Ontology_term=GO:0099001,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_process=symbiont genome ejection through host cell envelope%2C long flexible tail mechanism|0099001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000423989.1;locus_tag=YPIP275_RS19435;product=phage portal protein;protein_id=WP_002211786.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 64480 65736 . - . ID=gene-YPIP275_RS19440;Name=YPIP275_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19440;old_locus_tag=YPIP275_1068 NZ_AAOS02000024.1 Protein Homology CDS 64480 65736 . - 0 ID=cds-WP_002211787.1;Parent=gene-YPIP275_RS19440;Dbxref=GenBank:WP_002211787.1;Name=WP_002211787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220889.1;locus_tag=YPIP275_RS19440;product=phage terminase large subunit;protein_id=WP_002211787.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 65739 66380 . - . ID=gene-YPIP275_RS19445;Name=YPIP275_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19445;old_locus_tag=YPIP275_1069 NZ_AAOS02000024.1 Protein Homology CDS 65739 66380 . - 0 ID=cds-WP_002211788.1;Parent=gene-YPIP275_RS19445;Dbxref=GenBank:WP_002211788.1;Name=WP_002211788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172027.1;locus_tag=YPIP275_RS19445;product=hypothetical protein;protein_id=WP_002211788.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 66576 66842 . - . ID=gene-YPIP275_RS19450;Name=YPIP275_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19450;old_locus_tag=YPIP275_1070 NZ_AAOS02000024.1 Protein Homology CDS 66576 66842 . - 0 ID=cds-WP_000176291.1;Parent=gene-YPIP275_RS19450;Dbxref=GenBank:WP_000176291.1;Name=WP_000176291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220891.1;locus_tag=YPIP275_RS19450;product=hypothetical protein;protein_id=WP_000176291.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 66852 67742 . - . ID=gene-YPIP275_RS19455;Name=YPIP275_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19455;old_locus_tag=YPIP275_1071 NZ_AAOS02000024.1 Protein Homology CDS 66852 67742 . - 0 ID=cds-WP_002211789.1;Parent=gene-YPIP275_RS19455;Dbxref=GenBank:WP_002211789.1;Name=WP_002211789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220892.1;locus_tag=YPIP275_RS19455;product=hypothetical protein;protein_id=WP_002211789.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 67748 68002 . - . ID=gene-YPIP275_RS19460;Name=YPIP275_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19460;old_locus_tag=YPIP275_1072 NZ_AAOS02000024.1 Protein Homology CDS 67748 68002 . - 0 ID=cds-WP_002211790.1;Parent=gene-YPIP275_RS19460;Dbxref=GenBank:WP_002211790.1;Name=WP_002211790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220893.1;locus_tag=YPIP275_RS19460;product=hypothetical protein;protein_id=WP_002211790.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 67995 68633 . - . ID=gene-YPIP275_RS19465;Name=YPIP275_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19465;old_locus_tag=YPIP275_1073 NZ_AAOS02000024.1 Protein Homology CDS 67995 68633 . - 0 ID=cds-WP_002211791.1;Parent=gene-YPIP275_RS19465;Dbxref=GenBank:WP_002211791.1;Name=WP_002211791.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049674.1;locus_tag=YPIP275_RS19465;product=ATP-binding cassette domain-containing protein;protein_id=WP_002211791.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 68630 69298 . - . ID=gene-YPIP275_RS19470;Name=YPIP275_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19470;old_locus_tag=YPIP275_1074 NZ_AAOS02000024.1 Protein Homology CDS 68630 69298 . - 0 ID=cds-WP_002211792.1;Parent=gene-YPIP275_RS19470;Dbxref=GenBank:WP_002211792.1;Name=WP_002211792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220896.1;locus_tag=YPIP275_RS19470;product=ParB/Srx family N-terminal domain-containing protein;protein_id=WP_002211792.1;transl_table=11 NZ_AAOS02000024.1 RefSeq pseudogene 69298 69992 . - . ID=gene-YPIP275_RS19475;Name=YPIP275_RS19475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS19475;old_locus_tag=YPIP275_1075;pseudo=true NZ_AAOS02000024.1 Protein Homology CDS 69298 69992 . - 0 ID=cds-YPIP275_RS19475;Parent=gene-YPIP275_RS19475;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220897.1;locus_tag=YPIP275_RS19475;product=ParB/RepB/Spo0J family partition protein;pseudo=true;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 70061 71620 . + . ID=gene-YPIP275_RS19480;Name=YPIP275_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19480;old_locus_tag=YPIP275_1076 NZ_AAOS02000024.1 Protein Homology CDS 70061 71620 . + 0 ID=cds-WP_002211794.1;Parent=gene-YPIP275_RS19480;Dbxref=GenBank:WP_002211794.1;Name=WP_002211794.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220898.1;locus_tag=YPIP275_RS19480;product=DEAD/DEAH box helicase;protein_id=WP_002211794.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 71623 71901 . + . ID=gene-YPIP275_RS19485;Name=YPIP275_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19485 NZ_AAOS02000024.1 Protein Homology CDS 71623 71901 . + 0 ID=cds-WP_002214131.1;Parent=gene-YPIP275_RS19485;Dbxref=GenBank:WP_002214131.1;Name=WP_002214131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291547.1;locus_tag=YPIP275_RS19485;product=hypothetical protein;protein_id=WP_002214131.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 71961 72383 . + . ID=gene-YPIP275_RS19490;Name=YPIP275_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19490;old_locus_tag=YPIP275_1078 NZ_AAOS02000024.1 Protein Homology CDS 71961 72383 . + 0 ID=cds-WP_002211796.1;Parent=gene-YPIP275_RS19490;Dbxref=GenBank:WP_002211796.1;Name=WP_002211796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016051714.1;locus_tag=YPIP275_RS19490;product=hypothetical protein;protein_id=WP_002211796.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 72388 72915 . + . ID=gene-YPIP275_RS19495;Name=YPIP275_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19495 NZ_AAOS02000024.1 Protein Homology CDS 72388 72915 . + 0 ID=cds-WP_002214134.1;Parent=gene-YPIP275_RS19495;Dbxref=GenBank:WP_002214134.1;Name=WP_002214134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000182009.1;locus_tag=YPIP275_RS19495;product=transcriptional regulator;protein_id=WP_002214134.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 73237 73887 . + . ID=gene-YPIP275_RS19500;Name=YPIP275_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19500;old_locus_tag=YPIP275_1081 NZ_AAOS02000024.1 Protein Homology CDS 73237 73887 . + 0 ID=cds-WP_002211799.1;Parent=gene-YPIP275_RS19500;Dbxref=GenBank:WP_002211799.1;Name=WP_002211799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220903.1;locus_tag=YPIP275_RS19500;product=hypothetical protein;protein_id=WP_002211799.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 73972 74199 . + . ID=gene-YPIP275_RS19505;Name=YPIP275_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19505 NZ_AAOS02000024.1 Protein Homology CDS 73972 74199 . + 0 ID=cds-WP_002214137.1;Parent=gene-YPIP275_RS19505;Dbxref=GenBank:WP_002214137.1;Name=WP_002214137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214137.1;locus_tag=YPIP275_RS19505;product=hypothetical protein;protein_id=WP_002214137.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 74838 75320 . - . ID=gene-YPIP275_RS19515;Name=YPIP275_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19515;old_locus_tag=YPIP275_1083 NZ_AAOS02000024.1 Protein Homology CDS 74838 75320 . - 0 ID=cds-WP_002211801.1;Parent=gene-YPIP275_RS19515;Dbxref=GenBank:WP_002211801.1;Name=WP_002211801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211801.1;locus_tag=YPIP275_RS19515;product=hypothetical protein;protein_id=WP_002211801.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 75526 75807 . - . ID=gene-YPIP275_RS19525;Name=YPIP275_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19525;old_locus_tag=YPIP275_1084 NZ_AAOS02000024.1 Protein Homology CDS 75526 75807 . - 0 ID=cds-WP_002211802.1;Parent=gene-YPIP275_RS19525;Dbxref=GenBank:WP_002211802.1;Name=WP_002211802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016051708.1;locus_tag=YPIP275_RS19525;product=hypothetical protein;protein_id=WP_002211802.1;transl_table=11 NZ_AAOS02000024.1 RefSeq gene 76007 76465 . - . ID=gene-YPIP275_RS19530;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS19530;old_locus_tag=YPIP275_1085 NZ_AAOS02000024.1 Protein Homology CDS 76007 76465 . - 0 ID=cds-WP_002213775.1-13;Parent=gene-YPIP275_RS19530;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS19530;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000024.1 RefSeq pseudogene 76674 76750 . - . ID=gene-YPIP275_RS28920;Name=YPIP275_RS28920;end_range=76750,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28920;partial=true;pseudo=true NZ_AAOS02000024.1 Protein Homology CDS 76674 76750 . - 2 ID=cds-YPIP275_RS28920;Parent=gene-YPIP275_RS28920;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=76750,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220938.1;locus_tag=YPIP275_RS28920;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_AAOS02000023.1 1 81274 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000023.1 RefSeq region 1 81274 . + . ID=NZ_AAOS02000023.1:1..81274;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000023.1 RefSeq gene 1 87 . + . ID=gene-YPIP275_RS27740;Name=YPIP275_RS27740;gbkey=Gene;gene_biotype=ncRNA;locus_tag=YPIP275_RS27740;partial=true;start_range=.,1 NZ_AAOS02000023.1 cmsearch ncRNA 1 87 . + . ID=rna-YPIP275_RS27740;Parent=gene-YPIP275_RS27740;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS27740;partial=true;product=RtT sRNA;start_range=.,1 NZ_AAOS02000023.1 cmsearch exon 1 87 . + . ID=exon-YPIP275_RS27740-1;Parent=rna-YPIP275_RS27740;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS27740;partial=true;product=RtT sRNA;start_range=.,1 NZ_AAOS02000023.1 RefSeq gene 134 260 . + . ID=gene-YPIP275_RS26450;Name=YPIP275_RS26450;gbkey=Gene;gene_biotype=ncRNA;locus_tag=YPIP275_RS26450 NZ_AAOS02000023.1 cmsearch ncRNA 134 260 . + . ID=rna-YPIP275_RS26450;Parent=gene-YPIP275_RS26450;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS26450;product=RtT sRNA NZ_AAOS02000023.1 cmsearch exon 134 260 . + . ID=exon-YPIP275_RS26450-1;Parent=rna-YPIP275_RS26450;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS26450;product=RtT sRNA NZ_AAOS02000023.1 RefSeq gene 423 1283 . - . ID=gene-YPIP275_RS18675;Name=YPIP275_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18675;old_locus_tag=YPIP275_1683 NZ_AAOS02000023.1 Protein Homology CDS 423 1283 . - 0 ID=cds-WP_002211665.1;Parent=gene-YPIP275_RS18675;Dbxref=GenBank:WP_002211665.1;Name=WP_002211665.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211665.1;locus_tag=YPIP275_RS18675;product=LysR family transcriptional regulator;protein_id=WP_002211665.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 2093 2899 . + . ID=gene-YPIP275_RS18680;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=YPIP275_RS18680;old_locus_tag=YPIP275_1685 NZ_AAOS02000023.1 Protein Homology CDS 2093 2899 . + 0 ID=cds-WP_002211667.1;Parent=gene-YPIP275_RS18680;Dbxref=GenBank:WP_002211667.1;Name=WP_002211667.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893059.1;locus_tag=YPIP275_RS18680;product=exodeoxyribonuclease III;protein_id=WP_002211667.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 2997 3383 . + . ID=gene-YPIP275_RS18685;Name=YPIP275_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18685;old_locus_tag=YPIP275_1686 NZ_AAOS02000023.1 Protein Homology CDS 2997 3383 . + 0 ID=cds-WP_002211668.1;Parent=gene-YPIP275_RS18685;Dbxref=GenBank:WP_002211668.1;Name=WP_002211668.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211668.1;locus_tag=YPIP275_RS18685;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_002211668.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 3396 3686 . - . ID=gene-YPIP275_RS18690;Name=YPIP275_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18690;old_locus_tag=YPIP275_1687 NZ_AAOS02000023.1 Protein Homology CDS 3396 3686 . - 0 ID=cds-WP_002211669.1;Parent=gene-YPIP275_RS18690;Dbxref=GenBank:WP_002211669.1;Name=WP_002211669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211669.1;locus_tag=YPIP275_RS18690;product=DUF1496 domain-containing protein;protein_id=WP_002211669.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 3683 5608 . - . ID=gene-YPIP275_RS18695;Name=YPIP275_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18695;old_locus_tag=YPIP275_1688 NZ_AAOS02000023.1 Protein Homology CDS 3683 5608 . - 0 ID=cds-WP_002211670.1;Parent=gene-YPIP275_RS18695;Dbxref=GenBank:WP_002211670.1;Name=WP_002211670.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105118.1;locus_tag=YPIP275_RS18695;product=DNA topoisomerase III;protein_id=WP_002211670.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 5670 6716 . - . ID=gene-YPIP275_RS18700;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=YPIP275_RS18700;old_locus_tag=YPIP275_1689 NZ_AAOS02000023.1 Protein Homology CDS 5670 6716 . - 0 ID=cds-WP_002211671.1;Parent=gene-YPIP275_RS18700;Dbxref=GenBank:WP_002211671.1;Name=WP_002211671.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=L-selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211671.1;locus_tag=YPIP275_RS18700;product=selenide%2C water dikinase SelD;protein_id=WP_002211671.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 6941 7492 . - . ID=gene-YPIP275_RS18705;Name=YPIP275_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18705;old_locus_tag=YPIP275_1691 NZ_AAOS02000023.1 Protein Homology CDS 6941 7492 . - 0 ID=cds-WP_002211673.1;Parent=gene-YPIP275_RS18705;Dbxref=GenBank:WP_002211673.1;Name=WP_002211673.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304095.1;locus_tag=YPIP275_RS18705;product=NAD(P)H nitroreductase;protein_id=WP_002211673.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 7655 9505 . + . ID=gene-YPIP275_RS18710;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=YPIP275_RS18710;old_locus_tag=YPIP275_1692 NZ_AAOS02000023.1 Protein Homology CDS 7655 9505 . + 0 ID=cds-WP_002211674.1;Parent=gene-YPIP275_RS18710;Dbxref=GenBank:WP_002211674.1;Name=WP_002211674.1;Ontology_term=GO:0051604,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083189.1;locus_tag=YPIP275_RS18710;product=signal peptide peptidase SppA;protein_id=WP_002211674.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 9622 10638 . + . ID=gene-YPIP275_RS18715;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=YPIP275_RS18715;old_locus_tag=YPIP275_1693 NZ_AAOS02000023.1 Protein Homology CDS 9622 10638 . + 0 ID=cds-WP_002211675.1;Parent=gene-YPIP275_RS18715;Dbxref=GenBank:WP_002211675.1;Name=WP_002211675.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192430.1;locus_tag=YPIP275_RS18715;product=asparaginase;protein_id=WP_002211675.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 10653 11300 . + . ID=gene-YPIP275_RS18720;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=YPIP275_RS18720;old_locus_tag=YPIP275_1694 NZ_AAOS02000023.1 Protein Homology CDS 10653 11300 . + 0 ID=cds-WP_002211676.1;Parent=gene-YPIP275_RS18720;Dbxref=GenBank:WP_002211676.1;Name=WP_002211676.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211676.1;locus_tag=YPIP275_RS18720;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_002211676.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 11434 11706 . - . ID=gene-YPIP275_RS18725;Name=YPIP275_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18725;old_locus_tag=YPIP275_1695 NZ_AAOS02000023.1 Protein Homology CDS 11434 11706 . - 0 ID=cds-WP_002217933.1;Parent=gene-YPIP275_RS18725;Dbxref=GenBank:WP_002217933.1;Name=WP_002217933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005162905.1;locus_tag=YPIP275_RS18725;product=YeaC family protein;protein_id=WP_002217933.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 11777 12190 . - . ID=gene-YPIP275_RS18730;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=YPIP275_RS18730;old_locus_tag=YPIP275_1696 NZ_AAOS02000023.1 Protein Homology CDS 11777 12190 . - 0 ID=cds-WP_002211677.1;Parent=gene-YPIP275_RS18730;Dbxref=GenBank:WP_002211677.1;Name=WP_002211677.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715275.1;locus_tag=YPIP275_RS18730;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_002211677.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 12538 13533 . + . ID=gene-YPIP275_RS18735;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=YPIP275_RS18735;old_locus_tag=YPIP275_1697 NZ_AAOS02000023.1 Protein Homology CDS 12538 13533 . + 0 ID=cds-WP_002224141.1;Parent=gene-YPIP275_RS18735;Dbxref=GenBank:WP_002224141.1;Name=WP_002224141.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310515.1;locus_tag=YPIP275_RS18735;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_002224141.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 13847 14722 . + . ID=gene-YPIP275_RS18740;Name=YPIP275_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18740;old_locus_tag=YPIP275_1698 NZ_AAOS02000023.1 Protein Homology CDS 13847 14722 . + 0 ID=cds-WP_002211679.1;Parent=gene-YPIP275_RS18740;Dbxref=GenBank:WP_002211679.1;Name=WP_002211679.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105122.1;locus_tag=YPIP275_RS18740;product=D-hexose-6-phosphate mutarotase;protein_id=WP_002211679.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 14795 15565 . - . ID=gene-YPIP275_RS18745;Name=YPIP275_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18745;old_locus_tag=YPIP275_1699 NZ_AAOS02000023.1 Protein Homology CDS 14795 15565 . - 0 ID=cds-WP_002211680.1;Parent=gene-YPIP275_RS18745;Dbxref=GenBank:WP_002211680.1;Name=WP_002211680.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014462352.1;locus_tag=YPIP275_RS18745;product=MipA/OmpV family protein;protein_id=WP_002211680.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 15728 15940 . - . ID=gene-YPIP275_RS27745;Name=YPIP275_RS27745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27745 NZ_AAOS02000023.1 Protein Homology CDS 15728 15940 . - 0 ID=cds-WP_002221841.1;Parent=gene-YPIP275_RS27745;Dbxref=GenBank:WP_002221841.1;Name=WP_002221841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221841.1;locus_tag=YPIP275_RS27745;product=hypothetical protein;protein_id=WP_002221841.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 15988 17922 . + . ID=gene-YPIP275_RS18750;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=YPIP275_RS18750;old_locus_tag=YPIP275_1700 NZ_AAOS02000023.1 Protein Homology CDS 15988 17922 . + 0 ID=cds-WP_002211681.1;Parent=gene-YPIP275_RS18750;Dbxref=GenBank:WP_002211681.1;Name=WP_002211681.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=YPIP275_RS18750;product=protein kinase YeaG;protein_id=WP_002211681.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 18072 19346 . + . ID=gene-YPIP275_RS18755;Name=YPIP275_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18755;old_locus_tag=YPIP275_1701 NZ_AAOS02000023.1 Protein Homology CDS 18072 19346 . + 0 ID=cds-WP_002216501.1;Parent=gene-YPIP275_RS18755;Dbxref=GenBank:WP_002216501.1;Name=WP_002216501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216501.1;locus_tag=YPIP275_RS18755;product=YeaH/YhbH family protein;protein_id=WP_002216501.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 19454 20572 . + . ID=gene-YPIP275_RS18760;Name=YPIP275_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18760;old_locus_tag=YPIP275_1702 NZ_AAOS02000023.1 Protein Homology CDS 19454 20572 . + 0 ID=cds-WP_002211683.1;Parent=gene-YPIP275_RS18760;Dbxref=GenBank:WP_002211683.1;Name=WP_002211683.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192428.1;locus_tag=YPIP275_RS18760;product=DMT family transporter;protein_id=WP_002211683.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 20607 21512 . - . ID=gene-YPIP275_RS18765;Name=YPIP275_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18765;old_locus_tag=YPIP275_1703 NZ_AAOS02000023.1 Protein Homology CDS 20607 21512 . - 0 ID=cds-WP_002211684.1;Parent=gene-YPIP275_RS18765;Dbxref=GenBank:WP_002211684.1;Name=WP_002211684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211684.1;locus_tag=YPIP275_RS18765;product=LysR family transcriptional regulator;protein_id=WP_002211684.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 21710 22579 . + . ID=gene-YPIP275_RS18770;Name=YPIP275_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18770;old_locus_tag=YPIP275_1704 NZ_AAOS02000023.1 Protein Homology CDS 21710 22579 . + 0 ID=cds-WP_002211685.1;Parent=gene-YPIP275_RS18770;Dbxref=GenBank:WP_002211685.1;Name=WP_002211685.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211685.1;locus_tag=YPIP275_RS18770;product=pirin family protein;protein_id=WP_002211685.1;transl_table=11 NZ_AAOS02000023.1 RefSeq pseudogene 22844 24033 . + . ID=gene-YPIP275_RS18775;Name=YPIP275_RS18775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS18775;old_locus_tag=YPIP275_1705;pseudo=true NZ_AAOS02000023.1 Protein Homology CDS 22844 24033 . + 0 ID=cds-YPIP275_RS18775;Parent=gene-YPIP275_RS18775;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005162928.1;locus_tag=YPIP275_RS18775;product=multidrug effflux MFS transporter;pseudo=true;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 24062 25366 . - . ID=gene-YPIP275_RS18780;Name=YPIP275_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18780;old_locus_tag=YPIP275_1706 NZ_AAOS02000023.1 Protein Homology CDS 24062 25366 . - 0 ID=cds-WP_002211686.1;Parent=gene-YPIP275_RS18780;Dbxref=GenBank:WP_002211686.1;Name=WP_002211686.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169245.1;locus_tag=YPIP275_RS18780;product=D-amino acid dehydrogenase;protein_id=WP_002211686.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 25831 27366 . + . ID=gene-YPIP275_RS18785;Name=YPIP275_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18785;old_locus_tag=YPIP275_1707 NZ_AAOS02000023.1 Protein Homology CDS 25831 27366 . + 0 ID=cds-WP_002211687.1;Parent=gene-YPIP275_RS18785;Dbxref=GenBank:WP_002211687.1;Name=WP_002211687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192425.1;locus_tag=YPIP275_RS18785;product=SpoVR family protein;protein_id=WP_002211687.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 27584 28303 . - . ID=gene-YPIP275_RS18790;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=YPIP275_RS18790;old_locus_tag=YPIP275_1708 NZ_AAOS02000023.1 Protein Homology CDS 27584 28303 . - 0 ID=cds-WP_002211688.1;Parent=gene-YPIP275_RS18790;Dbxref=GenBank:WP_002211688.1;Name=WP_002211688.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211688.1;locus_tag=YPIP275_RS18790;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_002211688.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 28547 30121 . + . ID=gene-YPIP275_RS18795;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=YPIP275_RS18795;old_locus_tag=YPIP275_1709 NZ_AAOS02000023.1 Protein Homology CDS 28547 30121 . + 0 ID=cds-WP_002211689.1;Parent=gene-YPIP275_RS18795;Dbxref=GenBank:WP_002211689.1;Name=WP_002211689.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816442.1;locus_tag=YPIP275_RS18795;product=sodium/proton antiporter NhaB;protein_id=WP_002211689.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 30357 30887 . + . ID=gene-YPIP275_RS18800;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=YPIP275_RS18800;old_locus_tag=YPIP275_1710 NZ_AAOS02000023.1 Protein Homology CDS 30357 30887 . + 0 ID=cds-WP_002227934.1;Parent=gene-YPIP275_RS18800;Dbxref=GenBank:WP_002227934.1;Name=WP_002227934.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227934.1;locus_tag=YPIP275_RS18800;product=disulfide bond formation protein DsbB;protein_id=WP_002227934.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 31031 31192 . + . ID=gene-YPIP275_RS28905;Name=YPIP275_RS28905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28905 NZ_AAOS02000023.1 Protein Homology CDS 31031 31192 . + 0 ID=cds-WP_214442623.1;Parent=gene-YPIP275_RS28905;Dbxref=GenBank:WP_214442623.1;Name=WP_214442623.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038384.1;locus_tag=YPIP275_RS28905;product=YnfU family zinc-binding protein;protein_id=WP_214442623.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 31304 31660 . - . ID=gene-YPIP275_RS18805;Name=YPIP275_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18805;old_locus_tag=YPIP275_1711 NZ_AAOS02000023.1 Protein Homology CDS 31304 31660 . - 0 ID=cds-WP_002214494.1;Parent=gene-YPIP275_RS18805;Dbxref=GenBank:WP_002214494.1;Name=WP_002214494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214494.1;locus_tag=YPIP275_RS18805;product=hypothetical protein;protein_id=WP_002214494.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 32752 33492 . + . ID=gene-YPIP275_RS18810;Name=YPIP275_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18810;old_locus_tag=YPIP275_1712 NZ_AAOS02000023.1 Protein Homology CDS 32752 33492 . + 0 ID=cds-WP_002211692.1;Parent=gene-YPIP275_RS18810;Dbxref=GenBank:WP_002211692.1;Name=WP_002211692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016586381.1;locus_tag=YPIP275_RS18810;product=hypothetical protein;protein_id=WP_002211692.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 33509 34708 . + . ID=gene-YPIP275_RS18815;Name=YPIP275_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18815;old_locus_tag=YPIP275_1713 NZ_AAOS02000023.1 Protein Homology CDS 33509 34708 . + 0 ID=cds-WP_002211693.1;Parent=gene-YPIP275_RS18815;Dbxref=GenBank:WP_002211693.1;Name=WP_002211693.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105123.1;locus_tag=YPIP275_RS18815;product=cysteine desulfurase family protein;protein_id=WP_002211693.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 34712 35884 . + . ID=gene-YPIP275_RS18820;Name=YPIP275_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18820;old_locus_tag=YPIP275_1714 NZ_AAOS02000023.1 Protein Homology CDS 34712 35884 . + 0 ID=cds-WP_002214492.1;Parent=gene-YPIP275_RS18820;Dbxref=GenBank:WP_002214492.1;Name=WP_002214492.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214492.1;locus_tag=YPIP275_RS18820;product=MFS transporter;protein_id=WP_002214492.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 36189 37397 . + . ID=gene-YPIP275_RS18825;Name=YPIP275_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18825;old_locus_tag=YPIP275_1715 NZ_AAOS02000023.1 Protein Homology CDS 36189 37397 . + 0 ID=cds-WP_002209743.1-10;Parent=gene-YPIP275_RS18825;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS18825;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 37618 38037 . - . ID=gene-YPIP275_RS18835;Name=YPIP275_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18835;old_locus_tag=YPIP275_1717 NZ_AAOS02000023.1 Protein Homology CDS 37618 38037 . - 0 ID=cds-WP_002211695.1;Parent=gene-YPIP275_RS18835;Dbxref=GenBank:WP_002211695.1;Name=WP_002211695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192278.1;locus_tag=YPIP275_RS18835;product=tail fiber assembly protein;protein_id=WP_002211695.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 38048 38965 . - . ID=gene-YPIP275_RS18840;Name=YPIP275_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18840;old_locus_tag=YPIP275_1718 NZ_AAOS02000023.1 Protein Homology CDS 38048 38965 . - 0 ID=cds-WP_002211696.1;Parent=gene-YPIP275_RS18840;Dbxref=GenBank:WP_002211696.1;Name=WP_002211696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002427308.1;locus_tag=YPIP275_RS18840;product=hypothetical protein;protein_id=WP_002211696.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 38982 39980 . - . ID=gene-YPIP275_RS18845;Name=YPIP275_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18845;old_locus_tag=YPIP275_1719 NZ_AAOS02000023.1 Protein Homology CDS 38982 39980 . - 0 ID=cds-WP_002211697.1;Parent=gene-YPIP275_RS18845;Dbxref=GenBank:WP_002211697.1;Name=WP_002211697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304424.1;locus_tag=YPIP275_RS18845;product=DUF6453 family protein;protein_id=WP_002211697.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 39980 43183 . - . ID=gene-YPIP275_RS18850;Name=YPIP275_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18850;old_locus_tag=YPIP275_1720 NZ_AAOS02000023.1 Protein Homology CDS 39980 43183 . - 0 ID=cds-WP_002211698.1;Parent=gene-YPIP275_RS18850;Dbxref=GenBank:WP_002211698.1;Name=WP_002211698.1;Ontology_term=GO:0019062,GO:0046813,GO:0098003,GO:0005515,GO:0098015;gbkey=CDS;go_component=virus tail|0098015||IEA;go_function=protein binding|0005515||IEA;go_process=virion attachment to host cell|0019062||IEA,receptor-mediated virion attachment to host cell|0046813||IEA,viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256950.1;locus_tag=YPIP275_RS18850;product=TipJ family phage tail tip protein;protein_id=WP_002211698.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 43359 43580 . + . ID=gene-YPIP275_RS18855;Name=YPIP275_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18855 NZ_AAOS02000023.1 Protein Homology CDS 43359 43580 . + 0 ID=cds-WP_002359202.1;Parent=gene-YPIP275_RS18855;Dbxref=GenBank:WP_002359202.1;Name=WP_002359202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002359202.1;locus_tag=YPIP275_RS18855;product=hypothetical protein;protein_id=WP_002359202.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 43549 43713 . - . ID=gene-YPIP275_RS18860;Name=YPIP275_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18860;old_locus_tag=YPIP275_1721 NZ_AAOS02000023.1 Protein Homology CDS 43549 43713 . - 0 ID=cds-WP_002211699.1;Parent=gene-YPIP275_RS18860;Dbxref=GenBank:WP_002211699.1;Name=WP_002211699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211699.1;locus_tag=YPIP275_RS18860;product=glutathione S-transferase family protein;protein_id=WP_002211699.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 43755 44375 . - . ID=gene-YPIP275_RS18865;Name=YPIP275_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18865;old_locus_tag=YPIP275_1722 NZ_AAOS02000023.1 Protein Homology CDS 43755 44375 . - 0 ID=cds-WP_002211700.1;Parent=gene-YPIP275_RS18865;Dbxref=GenBank:WP_002211700.1;Name=WP_002211700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211700.1;locus_tag=YPIP275_RS18865;product=tail assembly protein;protein_id=WP_002211700.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 44431 44646 . - . ID=gene-YPIP275_RS18870;Name=YPIP275_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18870;old_locus_tag=YPIP275_1723 NZ_AAOS02000023.1 Protein Homology CDS 44431 44646 . - 0 ID=cds-WP_002211701.1;Parent=gene-YPIP275_RS18870;Dbxref=GenBank:WP_002211701.1;Name=WP_002211701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211701.1;locus_tag=YPIP275_RS18870;product=hypothetical protein;protein_id=WP_002211701.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 44789 45340 . - . ID=gene-YPIP275_RS18875;Name=YPIP275_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18875;old_locus_tag=YPIP275_1724 NZ_AAOS02000023.1 Protein Homology CDS 44789 45340 . - 0 ID=cds-WP_002214482.1;Parent=gene-YPIP275_RS18875;Dbxref=GenBank:WP_002214482.1;Name=WP_002214482.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214482.1;locus_tag=YPIP275_RS18875;product=zinc ribbon domain-containing protein;protein_id=WP_002214482.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 45439 46446 . - . ID=gene-YPIP275_RS18880;Name=YPIP275_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18880;old_locus_tag=YPIP275_1726 NZ_AAOS02000023.1 Protein Homology CDS 45439 46446 . - 0 ID=cds-WP_002211704.1;Parent=gene-YPIP275_RS18880;Dbxref=GenBank:WP_002211704.1;Name=WP_002211704.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211704.1;locus_tag=YPIP275_RS18880;product=BRO-N domain-containing protein;protein_id=WP_002211704.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 46520 46687 . - . ID=gene-YPIP275_RS18885;Name=YPIP275_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18885;old_locus_tag=YPIP275_1727 NZ_AAOS02000023.1 Protein Homology CDS 46520 46687 . - 0 ID=cds-WP_002211705.1;Parent=gene-YPIP275_RS18885;Dbxref=GenBank:WP_002211705.1;Name=WP_002211705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211705.1;locus_tag=YPIP275_RS18885;product=hypothetical protein;protein_id=WP_002211705.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 46811 47242 . + . ID=gene-YPIP275_RS18890;Name=YPIP275_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18890;old_locus_tag=YPIP275_1728 NZ_AAOS02000023.1 Protein Homology CDS 46811 47242 . + 0 ID=cds-WP_002211706.1;Parent=gene-YPIP275_RS18890;Dbxref=GenBank:WP_002211706.1;Name=WP_002211706.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211706.1;locus_tag=YPIP275_RS18890;product=Arc family DNA-binding protein;protein_id=WP_002211706.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 47321 47953 . - . ID=gene-YPIP275_RS18895;Name=YPIP275_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18895;old_locus_tag=YPIP275_1729 NZ_AAOS02000023.1 Protein Homology CDS 47321 47953 . - 0 ID=cds-WP_002211707.1;Parent=gene-YPIP275_RS18895;Dbxref=GenBank:WP_002211707.1;Name=WP_002211707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304428.1;locus_tag=YPIP275_RS18895;product=C-type lectin-like domain-containing protein;protein_id=WP_002211707.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 48214 48924 . - . ID=gene-YPIP275_RS18900;Name=YPIP275_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18900;old_locus_tag=YPIP275_1730 NZ_AAOS02000023.1 Protein Homology CDS 48214 48924 . - 0 ID=cds-WP_002211708.1;Parent=gene-YPIP275_RS18900;Dbxref=GenBank:WP_002211708.1;Name=WP_002211708.1;Ontology_term=GO:0006508,GO:0008233,GO:0008270,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211708.1;locus_tag=YPIP275_RS18900;product=C40 family peptidase;protein_id=WP_002211708.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 48927 49679 . - . ID=gene-YPIP275_RS18905;Name=YPIP275_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18905;old_locus_tag=YPIP275_1731 NZ_AAOS02000023.1 Protein Homology CDS 48927 49679 . - 0 ID=cds-WP_002211709.1;Parent=gene-YPIP275_RS18905;Dbxref=GenBank:WP_002211709.1;Name=WP_002211709.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211709.1;locus_tag=YPIP275_RS18905;product=phage minor tail protein L;protein_id=WP_002211709.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 49800 50258 . - . ID=gene-YPIP275_RS18910;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS18910;old_locus_tag=YPIP275_1732 NZ_AAOS02000023.1 Protein Homology CDS 49800 50258 . - 0 ID=cds-WP_002213759.1-5;Parent=gene-YPIP275_RS18910;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS18910;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 50563 50904 . - . ID=gene-YPIP275_RS18920;Name=YPIP275_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18920;old_locus_tag=YPIP275_1733 NZ_AAOS02000023.1 Protein Homology CDS 50563 50904 . - 0 ID=cds-WP_002211710.1;Parent=gene-YPIP275_RS18920;Dbxref=GenBank:WP_002211710.1;Name=WP_002211710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211710.1;locus_tag=YPIP275_RS18920;product=phage tail protein;protein_id=WP_002211710.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 50907 54410 . - . ID=gene-YPIP275_RS18925;Name=YPIP275_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18925;old_locus_tag=YPIP275_1734 NZ_AAOS02000023.1 Protein Homology CDS 50907 54410 . - 0 ID=cds-WP_002211711.1;Parent=gene-YPIP275_RS18925;Dbxref=GenBank:WP_002211711.1;Name=WP_002211711.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229598.1;locus_tag=YPIP275_RS18925;product=phage tail tape measure protein;protein_id=WP_002211711.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 54411 54671 . - . ID=gene-YPIP275_RS18930;Name=YPIP275_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18930 NZ_AAOS02000023.1 Protein Homology CDS 54411 54671 . - 0 ID=cds-WP_071525538.1;Parent=gene-YPIP275_RS18930;Dbxref=GenBank:WP_071525538.1;Name=WP_071525538.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020388.7;locus_tag=YPIP275_RS18930;product=DUF1799 domain-containing protein;protein_id=WP_071525538.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 54719 55030 . - . ID=gene-YPIP275_RS18935;Name=YPIP275_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18935;old_locus_tag=YPIP275_1735 NZ_AAOS02000023.1 Protein Homology CDS 54719 55030 . - 0 ID=cds-WP_002211712.1;Parent=gene-YPIP275_RS18935;Dbxref=GenBank:WP_002211712.1;Name=WP_002211712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211712.1;locus_tag=YPIP275_RS18935;product=phage tail assembly chaperone;protein_id=WP_002211712.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 55043 55963 . - . ID=gene-YPIP275_RS18940;Name=YPIP275_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18940;old_locus_tag=YPIP275_1736 NZ_AAOS02000023.1 Protein Homology CDS 55043 55963 . - 0 ID=cds-WP_002211713.1;Parent=gene-YPIP275_RS18940;Dbxref=GenBank:WP_002211713.1;Name=WP_002211713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211713.1;locus_tag=YPIP275_RS18940;product=phage tail tube protein;protein_id=WP_002211713.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 56029 56436 . - . ID=gene-YPIP275_RS18945;Name=YPIP275_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18945;old_locus_tag=YPIP275_1737 NZ_AAOS02000023.1 Protein Homology CDS 56029 56436 . - 0 ID=cds-WP_002211714.1;Parent=gene-YPIP275_RS18945;Dbxref=GenBank:WP_002211714.1;Name=WP_002211714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082947.1;locus_tag=YPIP275_RS18945;product=DUF4128 domain-containing protein;protein_id=WP_002211714.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 56433 57017 . - . ID=gene-YPIP275_RS18950;Name=YPIP275_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18950;old_locus_tag=YPIP275_1738 NZ_AAOS02000023.1 Protein Homology CDS 56433 57017 . - 0 ID=cds-WP_002211715.1;Parent=gene-YPIP275_RS18950;Dbxref=GenBank:WP_002211715.1;Name=WP_002211715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082946.1;locus_tag=YPIP275_RS18950;product=hypothetical protein;protein_id=WP_002211715.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 57019 57369 . - . ID=gene-YPIP275_RS18955;Name=YPIP275_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18955;old_locus_tag=YPIP275_1739 NZ_AAOS02000023.1 Protein Homology CDS 57019 57369 . - 0 ID=cds-WP_002211716.1;Parent=gene-YPIP275_RS18955;Dbxref=GenBank:WP_002211716.1;Name=WP_002211716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211716.1;locus_tag=YPIP275_RS18955;product=hypothetical protein;protein_id=WP_002211716.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 57371 57625 . - . ID=gene-YPIP275_RS18960;Name=YPIP275_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18960;old_locus_tag=YPIP275_1740 NZ_AAOS02000023.1 Protein Homology CDS 57371 57625 . - 0 ID=cds-WP_002211717.1;Parent=gene-YPIP275_RS18960;Dbxref=GenBank:WP_002211717.1;Name=WP_002211717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211717.1;locus_tag=YPIP275_RS18960;product=hypothetical protein;protein_id=WP_002211717.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 57622 58104 . - . ID=gene-YPIP275_RS18965;Name=YPIP275_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18965;old_locus_tag=YPIP275_1741 NZ_AAOS02000023.1 Protein Homology CDS 57622 58104 . - 0 ID=cds-WP_002211718.1;Parent=gene-YPIP275_RS18965;Dbxref=GenBank:WP_002211718.1;Name=WP_002211718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211718.1;locus_tag=YPIP275_RS18965;product=DnaT-like ssDNA-binding protein;protein_id=WP_002211718.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 58152 59357 . - . ID=gene-YPIP275_RS18970;Name=YPIP275_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18970;old_locus_tag=YPIP275_1742 NZ_AAOS02000023.1 Protein Homology CDS 58152 59357 . - 0 ID=cds-WP_002211719.1;Parent=gene-YPIP275_RS18970;Dbxref=GenBank:WP_002211719.1;Name=WP_002211719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211719.1;locus_tag=YPIP275_RS18970;product=major capsid protein;protein_id=WP_002211719.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 59371 60144 . - . ID=gene-YPIP275_RS18975;Name=YPIP275_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18975;old_locus_tag=YPIP275_1743 NZ_AAOS02000023.1 Protein Homology CDS 59371 60144 . - 0 ID=cds-WP_002211720.1;Parent=gene-YPIP275_RS18975;Dbxref=GenBank:WP_002211720.1;Name=WP_002211720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211720.1;locus_tag=YPIP275_RS18975;product=hypothetical protein;protein_id=WP_002211720.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 60266 61378 . - . ID=gene-YPIP275_RS18980;Name=YPIP275_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18980;old_locus_tag=YPIP275_1744 NZ_AAOS02000023.1 Protein Homology CDS 60266 61378 . - 0 ID=cds-WP_002211721.1;Parent=gene-YPIP275_RS18980;Dbxref=GenBank:WP_002211721.1;Name=WP_002211721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211721.1;locus_tag=YPIP275_RS18980;product=hypothetical protein;protein_id=WP_002211721.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 61379 62020 . - . ID=gene-YPIP275_RS18985;Name=YPIP275_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18985;old_locus_tag=YPIP275_1745 NZ_AAOS02000023.1 Protein Homology CDS 61379 62020 . - 0 ID=cds-WP_002228446.1;Parent=gene-YPIP275_RS18985;Dbxref=GenBank:WP_002228446.1;Name=WP_002228446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228446.1;locus_tag=YPIP275_RS18985;product=DUF4055 domain-containing protein;protein_id=WP_002228446.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 62039 62767 . - . ID=gene-YPIP275_RS18990;Name=YPIP275_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18990;old_locus_tag=YPIP275_1746 NZ_AAOS02000023.1 Protein Homology CDS 62039 62767 . - 0 ID=cds-WP_002228445.1;Parent=gene-YPIP275_RS18990;Dbxref=GenBank:WP_002228445.1;Name=WP_002228445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228445.1;locus_tag=YPIP275_RS18990;product=hypothetical protein;protein_id=WP_002228445.1;transl_table=11 NZ_AAOS02000023.1 RefSeq pseudogene 62767 63708 . - . ID=gene-YPIP275_RS18995;Name=YPIP275_RS18995;end_range=63708,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS18995;old_locus_tag=YPIP275_1747;partial=true;pseudo=true NZ_AAOS02000023.1 Protein Homology CDS 62767 63708 . - 0 ID=cds-YPIP275_RS18995;Parent=gene-YPIP275_RS18995;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=63708,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082939.1;locus_tag=YPIP275_RS18995;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 63746 64954 . - . ID=gene-YPIP275_RS19000;Name=YPIP275_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19000;old_locus_tag=YPIP275_1748 NZ_AAOS02000023.1 Protein Homology CDS 63746 64954 . - 0 ID=cds-WP_002209743.1-11;Parent=gene-YPIP275_RS19000;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS19000;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000023.1 RefSeq pseudogene 65026 65580 . - . ID=gene-YPIP275_RS19005;Name=YPIP275_RS19005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS19005;old_locus_tag=YPIP275_1749;partial=true;pseudo=true;start_range=.,65026 NZ_AAOS02000023.1 Protein Homology CDS 65026 65580 . - 0 ID=cds-YPIP275_RS19005;Parent=gene-YPIP275_RS19005;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082939.1;locus_tag=YPIP275_RS19005;partial=true;product=terminase large subunit;pseudo=true;start_range=.,65026;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 65590 66039 . - . ID=gene-YPIP275_RS19010;Name=YPIP275_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19010;old_locus_tag=YPIP275_1750 NZ_AAOS02000023.1 Protein Homology CDS 65590 66039 . - 0 ID=cds-WP_002211724.1;Parent=gene-YPIP275_RS19010;Dbxref=GenBank:WP_002211724.1;Name=WP_002211724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211724.1;locus_tag=YPIP275_RS19010;product=DUF2280 domain-containing protein;protein_id=WP_002211724.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 66070 66705 . - . ID=gene-YPIP275_RS19015;Name=YPIP275_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19015;old_locus_tag=YPIP275_1751 NZ_AAOS02000023.1 Protein Homology CDS 66070 66705 . - 0 ID=cds-WP_002211725.1;Parent=gene-YPIP275_RS19015;Dbxref=GenBank:WP_002211725.1;Name=WP_002211725.1;Ontology_term=GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211725.1;locus_tag=YPIP275_RS19015;product=putative metallopeptidase;protein_id=WP_002211725.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 67162 67875 . - . ID=gene-YPIP275_RS19020;Name=YPIP275_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19020;old_locus_tag=YPIP275_1753 NZ_AAOS02000023.1 Protein Homology CDS 67162 67875 . - 0 ID=cds-WP_002211727.1;Parent=gene-YPIP275_RS19020;Dbxref=GenBank:WP_002211727.1;Name=WP_002211727.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211727.1;locus_tag=YPIP275_RS19020;product=phage antirepressor KilAC domain-containing protein;protein_id=WP_002211727.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 68421 68879 . - . ID=gene-YPIP275_RS19025;Name=YPIP275_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19025;old_locus_tag=YPIP275_1755 NZ_AAOS02000023.1 Protein Homology CDS 68421 68879 . - 0 ID=cds-WP_002211729.1;Parent=gene-YPIP275_RS19025;Dbxref=GenBank:WP_002211729.1;Name=WP_002211729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211729.1;locus_tag=YPIP275_RS19025;product=lysis protein;protein_id=WP_002211729.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 68864 69376 . - . ID=gene-YPIP275_RS19030;Name=YPIP275_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19030;old_locus_tag=YPIP275_1756 NZ_AAOS02000023.1 Protein Homology CDS 68864 69376 . - 0 ID=cds-WP_002211730.1;Parent=gene-YPIP275_RS19030;Dbxref=GenBank:WP_002211730.1;Name=WP_002211730.1;Ontology_term=GO:0009253,GO:0016998,GO:0042742,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA,defense response to bacterium|0042742||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211730.1;locus_tag=YPIP275_RS19030;product=lysozyme;protein_id=WP_002211730.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 69407 69604 . - . ID=gene-YPIP275_RS19035;Name=YPIP275_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19035 NZ_AAOS02000023.1 Protein Homology CDS 69407 69604 . - 0 ID=cds-WP_002430108.1;Parent=gene-YPIP275_RS19035;Dbxref=GenBank:WP_002430108.1;Name=WP_002430108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430108.1;locus_tag=YPIP275_RS19035;product=phage holin family protein;protein_id=WP_002430108.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 69850 70125 . + . ID=gene-YPIP275_RS19040;Name=YPIP275_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19040 NZ_AAOS02000023.1 Protein Homology CDS 69850 70125 . + 0 ID=cds-WP_002215644.1;Parent=gene-YPIP275_RS19040;Dbxref=GenBank:WP_002215644.1;Name=WP_002215644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215644.1;locus_tag=YPIP275_RS19040;product=hypothetical protein;protein_id=WP_002215644.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 70122 70331 . - . ID=gene-YPIP275_RS19045;Name=YPIP275_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19045;old_locus_tag=YPIP275_1757 NZ_AAOS02000023.1 Protein Homology CDS 70122 70331 . - 0 ID=cds-WP_002211731.1;Parent=gene-YPIP275_RS19045;Dbxref=GenBank:WP_002211731.1;Name=WP_002211731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211731.1;locus_tag=YPIP275_RS19045;product=hypothetical protein;protein_id=WP_002211731.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 70755 71318 . - . ID=gene-YPIP275_RS19055;Name=YPIP275_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19055;old_locus_tag=YPIP275_1758 NZ_AAOS02000023.1 Protein Homology CDS 70755 71318 . - 0 ID=cds-WP_002211732.1;Parent=gene-YPIP275_RS19055;Dbxref=GenBank:WP_002211732.1;Name=WP_002211732.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211732.1;locus_tag=YPIP275_RS19055;product=BRO-N domain-containing protein;protein_id=WP_002211732.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 71589 71978 . - . ID=gene-YPIP275_RS19065;Name=YPIP275_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19065 NZ_AAOS02000023.1 Protein Homology CDS 71589 71978 . - 0 ID=cds-WP_002215636.1;Parent=gene-YPIP275_RS19065;Dbxref=GenBank:WP_002215636.1;Name=WP_002215636.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215636.1;locus_tag=YPIP275_RS19065;product=antiterminator Q family protein;protein_id=WP_002215636.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 71979 72584 . - . ID=gene-YPIP275_RS19070;Name=YPIP275_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19070;old_locus_tag=YPIP275_1761 NZ_AAOS02000023.1 Protein Homology CDS 71979 72584 . - 0 ID=cds-WP_002211735.1;Parent=gene-YPIP275_RS19070;Dbxref=GenBank:WP_002211735.1;Name=WP_002211735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211735.1;locus_tag=YPIP275_RS19070;product=recombination protein NinG;protein_id=WP_002211735.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 72658 73104 . - . ID=gene-YPIP275_RS19075;Name=YPIP275_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19075;old_locus_tag=YPIP275_1762 NZ_AAOS02000023.1 Protein Homology CDS 72658 73104 . - 0 ID=cds-WP_002211736.1;Parent=gene-YPIP275_RS19075;Dbxref=GenBank:WP_002211736.1;Name=WP_002211736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816488.1;locus_tag=YPIP275_RS19075;product=recombination protein NinB;protein_id=WP_002211736.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 73080 73829 . + . ID=gene-YPIP275_RS19080;Name=YPIP275_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19080;old_locus_tag=YPIP275_1763 NZ_AAOS02000023.1 Protein Homology CDS 73080 73829 . + 0 ID=cds-WP_071525537.1;Parent=gene-YPIP275_RS19080;Dbxref=GenBank:WP_071525537.1;Name=WP_071525537.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: protein motif:HMM:NF014177.7;locus_tag=YPIP275_RS19080;product=DNA adenine methylase;protein_id=WP_071525537.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 74129 74389 . + . ID=gene-YPIP275_RS19085;Name=YPIP275_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19085 NZ_AAOS02000023.1 Protein Homology CDS 74129 74389 . + 0 ID=cds-WP_002215632.1;Parent=gene-YPIP275_RS19085;Dbxref=GenBank:WP_002215632.1;Name=WP_002215632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215632.1;locus_tag=YPIP275_RS19085;product=excisionase family protein;protein_id=WP_002215632.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 74557 75339 . - . ID=gene-YPIP275_RS19090;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS19090;old_locus_tag=YPIP275_1764 NZ_AAOS02000023.1 Protein Homology CDS 74557 75339 . - 0 ID=cds-WP_001317493.1-14;Parent=gene-YPIP275_RS19090;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS19090;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 75336 76358 . - . ID=gene-YPIP275_RS19095;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS19095;old_locus_tag=YPIP275_1765 NZ_AAOS02000023.1 Protein Homology CDS 75336 76358 . - 0 ID=cds-WP_000255944.1-10;Parent=gene-YPIP275_RS19095;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS19095;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 76428 77666 . + . ID=gene-YPIP275_RS19100;Name=YPIP275_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19100;old_locus_tag=YPIP275_1766 NZ_AAOS02000023.1 Protein Homology CDS 76428 77666 . + 0 ID=cds-WP_002211738.1;Parent=gene-YPIP275_RS19100;Dbxref=GenBank:WP_002211738.1;Name=WP_002211738.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211738.1;locus_tag=YPIP275_RS19100;product=tyrosine-type recombinase/integrase;protein_id=WP_002211738.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 77693 78139 . - . ID=gene-YPIP275_RS19105;Name=ycgN;gbkey=Gene;gene=ycgN;gene_biotype=protein_coding;locus_tag=YPIP275_RS19105;old_locus_tag=YPIP275_1767 NZ_AAOS02000023.1 Protein Homology CDS 77693 78139 . - 0 ID=cds-WP_002211739.1;Parent=gene-YPIP275_RS19105;Dbxref=GenBank:WP_002211739.1;Name=WP_002211739.1;gbkey=CDS;gene=ycgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=YPIP275_RS19105;product=cysteine cluster protein YcgN;protein_id=WP_002211739.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 78242 78898 . - . ID=gene-YPIP275_RS19110;Name=YPIP275_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19110;old_locus_tag=YPIP275_1768 NZ_AAOS02000023.1 Protein Homology CDS 78242 78898 . - 0 ID=cds-WP_002211740.1;Parent=gene-YPIP275_RS19110;Dbxref=GenBank:WP_002211740.1;Name=WP_002211740.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211740.1;locus_tag=YPIP275_RS19110;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_002211740.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 78969 79937 . - . ID=gene-YPIP275_RS19115;Name=YPIP275_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19115;old_locus_tag=YPIP275_1769 NZ_AAOS02000023.1 Protein Homology CDS 78969 79937 . - 0 ID=cds-WP_016257570.1;Parent=gene-YPIP275_RS19115;Dbxref=GenBank:WP_016257570.1;Name=WP_016257570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257570.1;locus_tag=YPIP275_RS19115;product=lytic murein transglycosylase;protein_id=WP_016257570.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 79900 80112 . + . ID=gene-YPIP275_RS28910;Name=YPIP275_RS28910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28910;old_locus_tag=YPIP275_1770 NZ_AAOS02000023.1 Protein Homology CDS 79900 80112 . + 0 ID=cds-WP_002211742.1;Parent=gene-YPIP275_RS28910;Dbxref=GenBank:WP_002211742.1;Name=WP_002211742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211742.1;locus_tag=YPIP275_RS28910;product=hypothetical protein;protein_id=WP_002211742.1;transl_table=11 NZ_AAOS02000023.1 RefSeq gene 80195 80467 . - . ID=gene-YPIP275_RS19120;Name=YPIP275_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS19120;old_locus_tag=YPIP275_1771 NZ_AAOS02000023.1 Protein Homology CDS 80195 80467 . - 0 ID=cds-WP_002211743.1;Parent=gene-YPIP275_RS19120;Dbxref=GenBank:WP_002211743.1;Name=WP_002211743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005162995.1;locus_tag=YPIP275_RS19120;product=YcgL domain-containing protein;protein_id=WP_002211743.1;transl_table=11 NZ_AAOS02000023.1 RefSeq pseudogene 81188 81274 . + . ID=gene-YPIP275_RS27770;Name=minC;end_range=81274,.;gbkey=Gene;gene=minC;gene_biotype=pseudogene;locus_tag=YPIP275_RS27770;partial=true;pseudo=true NZ_AAOS02000023.1 Protein Homology CDS 81188 81274 . + 0 ID=cds-YPIP275_RS27770;Parent=gene-YPIP275_RS27770;Note=blocks the formation of polar Z-ring septums%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=81274,.;gbkey=CDS;gene=minC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083202.1;locus_tag=YPIP275_RS27770;partial=true;product=septum site-determining protein MinC;pseudo=true;transl_table=11 ##sequence-region NZ_AAOS02000022.1 1 84068 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000022.1 RefSeq region 1 84068 . + . ID=NZ_AAOS02000022.1:1..84068;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000022.1 RefSeq gene 228 1478 . - . ID=gene-YPIP275_RS18430;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=YPIP275_RS18430;old_locus_tag=YPIP275_1300 NZ_AAOS02000022.1 Protein Homology CDS 228 1478 . - 0 ID=cds-WP_002211623.1;Parent=gene-YPIP275_RS18430;Dbxref=GenBank:WP_002211623.1;Name=WP_002211623.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiC;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649373.1;locus_tag=YPIP275_RS18430;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_002211623.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 1714 3039 . + . ID=gene-YPIP275_RS18435;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=YPIP275_RS18435;old_locus_tag=YPIP275_1301 NZ_AAOS02000022.1 Protein Homology CDS 1714 3039 . + 0 ID=cds-WP_002211624.1;Parent=gene-YPIP275_RS18435;Dbxref=GenBank:WP_002211624.1;Name=WP_002211624.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity%2C acting on acetyl-CoA as donor|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318963.1;locus_tag=YPIP275_RS18435;product=amino-acid N-acetyltransferase;protein_id=WP_002211624.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 3194 5152 . - . ID=gene-YPIP275_RS18440;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=YPIP275_RS18440;old_locus_tag=YPIP275_1302 NZ_AAOS02000022.1 Protein Homology CDS 3194 5152 . - 0 ID=cds-WP_002215834.1;Parent=gene-YPIP275_RS18440;Dbxref=GenBank:WP_002215834.1;Name=WP_002215834.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192870.1;locus_tag=YPIP275_RS18440;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_002215834.1;transl_table=11 NZ_AAOS02000022.1 RefSeq pseudogene 5149 8810 . - . ID=gene-YPIP275_RS18445;Name=recB;gbkey=Gene;gene=recB;gene_biotype=pseudogene;locus_tag=YPIP275_RS18445;old_locus_tag=YPIP275_1303;pseudo=true NZ_AAOS02000022.1 Protein Homology CDS 5149 8810 . - 0 ID=cds-YPIP275_RS18445;Parent=gene-YPIP275_RS18445;Note=frameshifted;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104732.1;locus_tag=YPIP275_RS18445;product=exodeoxyribonuclease V subunit beta;pseudo=true;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 8807 11695 . - . ID=gene-YPIP275_RS18450;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=YPIP275_RS18450;old_locus_tag=YPIP275_1304 NZ_AAOS02000022.1 Protein Homology CDS 8807 11695 . - 0 ID=cds-WP_002211626.1;Parent=gene-YPIP275_RS18450;Dbxref=GenBank:WP_002211626.1;Name=WP_002211626.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303752.1;locus_tag=YPIP275_RS18450;product=pitrilysin;protein_id=WP_002211626.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 11777 15148 . - . ID=gene-YPIP275_RS18455;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=YPIP275_RS18455;old_locus_tag=YPIP275_1305 NZ_AAOS02000022.1 Protein Homology CDS 11777 15148 . - 0 ID=cds-WP_002211627.1;Parent=gene-YPIP275_RS18455;Dbxref=GenBank:WP_002211627.1;Name=WP_002211627.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220072.1;locus_tag=YPIP275_RS18455;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_002211627.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 15283 15693 . - . ID=gene-YPIP275_RS18460;Name=YPIP275_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18460;old_locus_tag=YPIP275_1306 NZ_AAOS02000022.1 Protein Homology CDS 15283 15693 . - 0 ID=cds-WP_002228047.1;Parent=gene-YPIP275_RS18460;Dbxref=GenBank:WP_002228047.1;Name=WP_002228047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228047.1;locus_tag=YPIP275_RS18460;product=type IV pilus modification PilV family protein;protein_id=WP_002228047.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 15681 16151 . - . ID=gene-YPIP275_RS18465;Name=YPIP275_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18465;old_locus_tag=YPIP275_1307 NZ_AAOS02000022.1 Protein Homology CDS 15681 16151 . - 0 ID=cds-WP_002211629.1;Parent=gene-YPIP275_RS18465;Dbxref=GenBank:WP_002211629.1;Name=WP_002211629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104730.1;locus_tag=YPIP275_RS18465;product=YgdB family protein;protein_id=WP_002211629.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 16148 16756 . - . ID=gene-YPIP275_RS18470;Name=YPIP275_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18470;old_locus_tag=YPIP275_1308 NZ_AAOS02000022.1 Protein Homology CDS 16148 16756 . - 0 ID=cds-WP_002211630.1;Parent=gene-YPIP275_RS18470;Dbxref=GenBank:WP_002211630.1;Name=WP_002211630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211630.1;locus_tag=YPIP275_RS18470;product=prepilin peptidase-dependent protein;protein_id=WP_002211630.1;transl_table=11 NZ_AAOS02000022.1 RefSeq pseudogene 16747 16923 . - . ID=gene-YPIP275_RS27695;Name=YPIP275_RS27695;end_range=16923,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS27695;partial=true;pseudo=true NZ_AAOS02000022.1 Protein Homology CDS 16747 16923 . - 0 ID=cds-YPIP275_RS27695;Parent=gene-YPIP275_RS27695;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=16923,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228638.1;locus_tag=YPIP275_RS27695;partial=true;product=prepilin peptidase-dependent protein;pseudo=true;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 16991 17773 . - . ID=gene-YPIP275_RS18475;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS18475;old_locus_tag=YPIP275_1309 NZ_AAOS02000022.1 Protein Homology CDS 16991 17773 . - 0 ID=cds-WP_001317493.1-15;Parent=gene-YPIP275_RS18475;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS18475;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 17770 18792 . - . ID=gene-YPIP275_RS18480;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS18480;old_locus_tag=YPIP275_1310 NZ_AAOS02000022.1 Protein Homology CDS 17770 18792 . - 0 ID=cds-WP_000255944.1-11;Parent=gene-YPIP275_RS18480;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS18480;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 18806 22219 . - . ID=gene-YPIP275_RS18485;Name=YPIP275_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18485;old_locus_tag=YPIP275_1311 NZ_AAOS02000022.1 Protein Homology CDS 18806 22219 . - 0 ID=cds-WP_002211631.1;Parent=gene-YPIP275_RS18485;Dbxref=GenBank:WP_002211631.1;Name=WP_002211631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171951.1;locus_tag=YPIP275_RS18485;product=beta-ketoacyl synthase N-terminal-like domain-containing protein;protein_id=WP_002211631.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 22370 24442 . - . ID=gene-YPIP275_RS18490;Name=YPIP275_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18490;old_locus_tag=YPIP275_1312 NZ_AAOS02000022.1 Protein Homology CDS 22370 24442 . - 0 ID=cds-WP_002211632.1;Parent=gene-YPIP275_RS18490;Dbxref=GenBank:WP_002211632.1;Name=WP_002211632.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193028.1;locus_tag=YPIP275_RS18490;product=TonB-dependent receptor;protein_id=WP_002211632.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 24830 26062 . - . ID=gene-YPIP275_RS18495;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=YPIP275_RS18495;old_locus_tag=YPIP275_1313 NZ_AAOS02000022.1 Protein Homology CDS 24830 26062 . - 0 ID=cds-WP_002211633.1;Parent=gene-YPIP275_RS18495;Dbxref=GenBank:WP_002211633.1;Name=WP_002211633.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211633.1;locus_tag=YPIP275_RS18495;product=peptidase T;protein_id=WP_002211633.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 26140 27696 . - . ID=gene-YPIP275_RS18500;Name=YPIP275_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18500;old_locus_tag=YPIP275_1314 NZ_AAOS02000022.1 Protein Homology CDS 26140 27696 . - 0 ID=cds-WP_002211634.1;Parent=gene-YPIP275_RS18500;Dbxref=GenBank:WP_002211634.1;Name=WP_002211634.1;Ontology_term=GO:1902604,GO:0015558;gbkey=CDS;go_function=secondary active p-aminobenzoyl-glutamate transmembrane transporter activity|0015558||IEA;go_process=p-aminobenzoyl-glutamate transmembrane transport|1902604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104550.1;locus_tag=YPIP275_RS18500;product=AbgT family transporter;protein_id=WP_002211634.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 28415 30232 . + . ID=gene-YPIP275_RS18505;Name=YPIP275_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18505;old_locus_tag=YPIP275_1316 NZ_AAOS02000022.1 Protein Homology CDS 28415 30232 . + 0 ID=cds-WP_002211636.1;Parent=gene-YPIP275_RS18505;Dbxref=GenBank:WP_002211636.1;Name=WP_002211636.1;Ontology_term=GO:0016567,GO:0004842;gbkey=CDS;go_function=ubiquitin-protein transferase activity|0004842||IEA;go_process=protein ubiquitination|0016567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002420423.1;locus_tag=YPIP275_RS18505;product=NEL-type E3 ubiquitin ligase domain-containing protein;protein_id=WP_002211636.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 30440 31315 . + . ID=gene-YPIP275_RS18510;Name=YPIP275_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18510;old_locus_tag=YPIP275_1317 NZ_AAOS02000022.1 Protein Homology CDS 30440 31315 . + 0 ID=cds-WP_002214025.1;Parent=gene-YPIP275_RS18510;Dbxref=GenBank:WP_002214025.1;Name=WP_002214025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014462267.1;locus_tag=YPIP275_RS18510;product=IpaH family type III secretion system E3 ubiquitin--protein ligase;protein_id=WP_002214025.1;transl_table=11 NZ_AAOS02000022.1 RefSeq pseudogene 31378 31482 . + . ID=gene-YPIP275_RS27715;Name=YPIP275_RS27715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS27715;partial=true;pseudo=true;start_range=.,31378 NZ_AAOS02000022.1 Protein Homology CDS 31378 31482 . + 0 ID=cds-YPIP275_RS27715;Parent=gene-YPIP275_RS27715;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016567,GO:0004842;gbkey=CDS;go_function=ubiquitin-protein transferase activity|0004842||IEA;go_process=protein ubiquitination|0016567||IEA;inference=COORDINATES: protein motif:HMM:NF025849.7;locus_tag=YPIP275_RS27715;partial=true;product=NEL-type E3 ubiquitin ligase domain-containing protein;pseudo=true;start_range=.,31378;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 31878 33758 . + . ID=gene-YPIP275_RS18515;Name=YPIP275_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18515;old_locus_tag=YPIP275_1318 NZ_AAOS02000022.1 Protein Homology CDS 31878 33758 . + 0 ID=cds-WP_002211637.1;Parent=gene-YPIP275_RS18515;Dbxref=GenBank:WP_002211637.1;Name=WP_002211637.1;Ontology_term=GO:0016567,GO:0004842;gbkey=CDS;go_function=ubiquitin-protein transferase activity|0004842||IEA;go_process=protein ubiquitination|0016567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002394608.1;locus_tag=YPIP275_RS18515;product=NEL-type E3 ubiquitin ligase domain-containing protein;protein_id=WP_002211637.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 33861 44978 . - . ID=gene-YPIP275_RS18520;Name=yapH;gbkey=Gene;gene=yapH;gene_biotype=protein_coding;locus_tag=YPIP275_RS18520;old_locus_tag=YPIP275_1319 NZ_AAOS02000022.1 Protein Homology CDS 33861 44978 . - 0 ID=cds-WP_002211638.1;Parent=gene-YPIP275_RS18520;Dbxref=GenBank:WP_002211638.1;Name=WP_002211638.1;gbkey=CDS;gene=yapH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211638.1;locus_tag=YPIP275_RS18520;product=autotransporter adhesin YapH;protein_id=WP_002211638.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 45832 46419 . - . ID=gene-YPIP275_RS18525;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=YPIP275_RS18525;old_locus_tag=YPIP275_1321 NZ_AAOS02000022.1 Protein Homology CDS 45832 46419 . - 0 ID=cds-WP_002211640.1;Parent=gene-YPIP275_RS18525;Dbxref=GenBank:WP_002211640.1;Name=WP_002211640.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211640.1;locus_tag=YPIP275_RS18525;product=copper-binding periplasmic metallochaperone CueP;protein_id=WP_002211640.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 46697 48187 . + . ID=gene-YPIP275_RS18530;Name=YPIP275_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18530;old_locus_tag=YPIP275_1322 NZ_AAOS02000022.1 Protein Homology CDS 46697 48187 . + 0 ID=cds-WP_002211641.1;Parent=gene-YPIP275_RS18530;Dbxref=GenBank:WP_002211641.1;Name=WP_002211641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104544.1;locus_tag=YPIP275_RS18530;product=ShET2/EspL2 family type III secretion system effector toxin;protein_id=WP_002211641.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 48322 51441 . - . ID=gene-YPIP275_RS18535;Name=YPIP275_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18535;old_locus_tag=YPIP275_1323 NZ_AAOS02000022.1 Protein Homology CDS 48322 51441 . - 0 ID=cds-WP_002211642.1;Parent=gene-YPIP275_RS18535;Dbxref=GenBank:WP_002211642.1;Name=WP_002211642.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104540.1;locus_tag=YPIP275_RS18535;product=efflux RND transporter permease subunit;protein_id=WP_002211642.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 51454 52731 . - . ID=gene-YPIP275_RS18540;Name=YPIP275_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18540;old_locus_tag=YPIP275_1324 NZ_AAOS02000022.1 Protein Homology CDS 51454 52731 . - 0 ID=cds-WP_002211643.1;Parent=gene-YPIP275_RS18540;Dbxref=GenBank:WP_002211643.1;Name=WP_002211643.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171949.1;locus_tag=YPIP275_RS18540;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_002211643.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 53170 53367 . + . ID=gene-YPIP275_RS18545;Name=YPIP275_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18545 NZ_AAOS02000022.1 GeneMarkS-2+ CDS 53170 53367 . + 0 ID=cds-WP_002214016.1;Parent=gene-YPIP275_RS18545;Dbxref=GenBank:WP_002214016.1;Name=WP_002214016.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS18545;product=hypothetical protein;protein_id=WP_002214016.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 53371 55737 . + . ID=gene-YPIP275_RS18550;Name=YPIP275_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18550;old_locus_tag=YPIP275_1327 NZ_AAOS02000022.1 Protein Homology CDS 53371 55737 . + 0 ID=cds-WP_002214014.1;Parent=gene-YPIP275_RS18550;Dbxref=GenBank:WP_002214014.1;Name=WP_002214014.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF012772.7;locus_tag=YPIP275_RS18550;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_002214014.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 55933 57287 . - . ID=gene-YPIP275_RS28900;Name=YPIP275_RS28900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28900 NZ_AAOS02000022.1 Protein Homology CDS 56837 57287 . - 0 ID=cds-WP_100067904.1-2;Parent=gene-YPIP275_RS28900;Dbxref=GenBank:WP_100067904.1;Name=WP_100067904.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558220.1;locus_tag=YPIP275_RS28900;product=IS3-like element IS1661 family transposase;protein_id=WP_100067904.1;transl_table=11 NZ_AAOS02000022.1 Protein Homology CDS 55933 56837 . - 2 ID=cds-WP_100067904.1-2;Parent=gene-YPIP275_RS28900;Dbxref=GenBank:WP_100067904.1;Name=WP_100067904.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558220.1;locus_tag=YPIP275_RS28900;product=IS3-like element IS1661 family transposase;protein_id=WP_100067904.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 57559 58983 . + . ID=gene-YPIP275_RS18565;Name=YPIP275_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18565;old_locus_tag=YPIP275_1330 NZ_AAOS02000022.1 Protein Homology CDS 57559 58983 . + 0 ID=cds-WP_002211645.1;Parent=gene-YPIP275_RS18565;Dbxref=GenBank:WP_002211645.1;Name=WP_002211645.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211645.1;locus_tag=YPIP275_RS18565;product=MFS transporter;protein_id=WP_002211645.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 59242 61422 . - . ID=gene-YPIP275_RS18570;Name=YPIP275_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18570;old_locus_tag=YPIP275_1331 NZ_AAOS02000022.1 Protein Homology CDS 59242 61422 . - 0 ID=cds-WP_002211646.1;Parent=gene-YPIP275_RS18570;Dbxref=GenBank:WP_002211646.1;Name=WP_002211646.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211646.1;locus_tag=YPIP275_RS18570;product=TonB-dependent siderophore receptor;protein_id=WP_002211646.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 61494 62822 . - . ID=gene-YPIP275_RS18575;Name=YPIP275_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18575;old_locus_tag=YPIP275_1332 NZ_AAOS02000022.1 Protein Homology CDS 61494 62822 . - 0 ID=cds-WP_002211647.1;Parent=gene-YPIP275_RS18575;Dbxref=GenBank:WP_002211647.1;Name=WP_002211647.1;Ontology_term=GO:0004497;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230481.1;locus_tag=YPIP275_RS18575;product=lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein;protein_id=WP_002211647.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 62819 64567 . - . ID=gene-YPIP275_RS18580;Name=iucC;gbkey=Gene;gene=iucC;gene_biotype=protein_coding;locus_tag=YPIP275_RS18580;old_locus_tag=YPIP275_1333 NZ_AAOS02000022.1 Protein Homology CDS 62819 64567 . - 0 ID=cds-WP_002211648.1;Parent=gene-YPIP275_RS18580;Dbxref=GenBank:WP_002211648.1;Name=WP_002211648.1;gbkey=CDS;gene=iucC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193001.1;locus_tag=YPIP275_RS18580;product=IucA/IucC family protein;protein_id=WP_002211648.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 64564 65514 . - . ID=gene-YPIP275_RS18585;Name=YPIP275_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18585;old_locus_tag=YPIP275_1334 NZ_AAOS02000022.1 Protein Homology CDS 64564 65514 . - 0 ID=cds-WP_002211649.1;Parent=gene-YPIP275_RS18585;Dbxref=GenBank:WP_002211649.1;Name=WP_002211649.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193000.1;locus_tag=YPIP275_RS18585;product=GNAT family N-acetyltransferase;protein_id=WP_002211649.1;transl_table=11 NZ_AAOS02000022.1 RefSeq pseudogene 65498 67269 . - . ID=gene-YPIP275_RS27720;Name=YPIP275_RS27720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS27720;old_locus_tag=YPIP275_1335;pseudo=true NZ_AAOS02000022.1 Protein Homology CDS 65498 67269 . - 0 ID=cds-YPIP275_RS27720;Parent=gene-YPIP275_RS27720;Note=frameshifted;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192999.1;locus_tag=YPIP275_RS27720;product=IucA/IucC family protein;pseudo=true;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 67520 68632 . + . ID=gene-YPIP275_RS18600;Name=YPIP275_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18600;old_locus_tag=YPIP275_1337 NZ_AAOS02000022.1 Protein Homology CDS 67520 68632 . + 0 ID=cds-WP_002231373.1;Parent=gene-YPIP275_RS18600;Dbxref=GenBank:WP_002231373.1;Name=WP_002231373.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231373.1;locus_tag=YPIP275_RS18600;product=MFS transporter;protein_id=WP_002231373.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 68580 68774 . + . ID=gene-YPIP275_RS27725;Name=YPIP275_RS27725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27725 NZ_AAOS02000022.1 Protein Homology CDS 68580 68774 . + 0 ID=cds-WP_002228661.1;Parent=gene-YPIP275_RS27725;Dbxref=GenBank:WP_002228661.1;Name=WP_002228661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228661.1;locus_tag=YPIP275_RS27725;product=hypothetical protein;protein_id=WP_002228661.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 68922 69755 . - . ID=gene-YPIP275_RS18605;Name=YPIP275_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18605;old_locus_tag=YPIP275_1338 NZ_AAOS02000022.1 Protein Homology CDS 68922 69755 . - 0 ID=cds-WP_002211652.1;Parent=gene-YPIP275_RS18605;Dbxref=GenBank:WP_002211652.1;Name=WP_002211652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104578.1;locus_tag=YPIP275_RS18605;product=intradiol ring-cleavage dioxygenase;protein_id=WP_002211652.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 70132 71508 . - . ID=gene-YPIP275_RS18610;Name=YPIP275_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18610;old_locus_tag=YPIP275_1340 NZ_AAOS02000022.1 Protein Homology CDS 70132 71508 . - 0 ID=cds-WP_002211654.1;Parent=gene-YPIP275_RS18610;Dbxref=GenBank:WP_002211654.1;Name=WP_002211654.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211654.1;locus_tag=YPIP275_RS18610;product=carboxylesterase family protein;protein_id=WP_002211654.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 72070 72813 . + . ID=gene-YPIP275_RS18615;Name=YPIP275_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18615;old_locus_tag=YPIP275_1342 NZ_AAOS02000022.1 Protein Homology CDS 72070 72813 . + 0 ID=cds-WP_002211655.1;Parent=gene-YPIP275_RS18615;Dbxref=GenBank:WP_002211655.1;Name=WP_002211655.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906169.1;locus_tag=YPIP275_RS18615;product=helix-turn-helix transcriptional regulator;protein_id=WP_002211655.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 72794 73444 . - . ID=gene-YPIP275_RS18620;Name=YPIP275_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18620;old_locus_tag=YPIP275_1341 NZ_AAOS02000022.1 Protein Homology CDS 72794 73444 . - 0 ID=cds-WP_002215903.1;Parent=gene-YPIP275_RS18620;Dbxref=GenBank:WP_002215903.1;Name=WP_002215903.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215903.1;locus_tag=YPIP275_RS18620;product=acyl-homoserine-lactone synthase;protein_id=WP_002215903.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 74624 75274 . + . ID=gene-YPIP275_RS18625;Name=YPIP275_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18625 NZ_AAOS02000022.1 Protein Homology CDS 74624 75274 . + 0 ID=cds-WP_002215902.1;Parent=gene-YPIP275_RS18625;Dbxref=GenBank:WP_002215902.1;Name=WP_002215902.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215902.1;locus_tag=YPIP275_RS18625;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_002215902.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 75725 76120 . + . ID=gene-YPIP275_RS18630;Name=YPIP275_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18630 NZ_AAOS02000022.1 Protein Homology CDS 75725 76120 . + 0 ID=cds-WP_002215900.1;Parent=gene-YPIP275_RS18630;Dbxref=GenBank:WP_002215900.1;Name=WP_002215900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215900.1;locus_tag=YPIP275_RS18630;product=lipoprotein;protein_id=WP_002215900.1;transl_table=11 NZ_AAOS02000022.1 RefSeq pseudogene 76188 76546 . + . ID=gene-YPIP275_RS18635;Name=YPIP275_RS18635;end_range=76546,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS18635;old_locus_tag=YPIP275_1346;partial=true;pseudo=true NZ_AAOS02000022.1 Protein Homology CDS 76188 76546 . + 0 ID=cds-YPIP275_RS18635;Parent=gene-YPIP275_RS18635;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=76546,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=YPIP275_RS18635;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 76625 76996 . + . ID=gene-YPIP275_RS18640;Name=YPIP275_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18640 NZ_AAOS02000022.1 Protein Homology CDS 76625 76996 . + 0 ID=cds-WP_002215898.1;Parent=gene-YPIP275_RS18640;Dbxref=GenBank:WP_002215898.1;Name=WP_002215898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413951.1;locus_tag=YPIP275_RS18640;product=hypothetical protein;protein_id=WP_002215898.1;transl_table=11 NZ_AAOS02000022.1 RefSeq pseudogene 77089 77184 . + . ID=gene-YPIP275_RS18645;Name=YPIP275_RS18645;end_range=77184,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS18645;old_locus_tag=YPIP275_1347;partial=true;pseudo=true;start_range=.,77089 NZ_AAOS02000022.1 Protein Homology CDS 77089 77184 . + 0 ID=cds-YPIP275_RS18645;Parent=gene-YPIP275_RS18645;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=77184,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611160.1;locus_tag=YPIP275_RS18645;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,77089;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 78396 78896 . + . ID=gene-YPIP275_RS18650;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=YPIP275_RS18650;old_locus_tag=YPIP275_1348 NZ_AAOS02000022.1 Protein Homology CDS 78396 78896 . + 0 ID=cds-WP_002211662.1;Parent=gene-YPIP275_RS18650;Dbxref=GenBank:WP_002211662.1;Name=WP_002211662.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213014.1;locus_tag=YPIP275_RS18650;product=type VI secretion system contractile sheath small subunit;protein_id=WP_002211662.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 78939 80483 . + . ID=gene-YPIP275_RS18655;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=YPIP275_RS18655;old_locus_tag=YPIP275_1349 NZ_AAOS02000022.1 Protein Homology CDS 78939 80483 . + 0 ID=cds-WP_002215896.1;Parent=gene-YPIP275_RS18655;Dbxref=GenBank:WP_002215896.1;Name=WP_002215896.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104626.1;locus_tag=YPIP275_RS18655;product=type VI secretion system contractile sheath large subunit;protein_id=WP_002215896.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 80495 81847 . + . ID=gene-YPIP275_RS18660;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=YPIP275_RS18660;old_locus_tag=YPIP275_1350 NZ_AAOS02000022.1 Protein Homology CDS 80495 81847 . + 0 ID=cds-WP_002211664.1;Parent=gene-YPIP275_RS18660;Dbxref=GenBank:WP_002211664.1;Name=WP_002211664.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213011.1;locus_tag=YPIP275_RS18660;product=type VI secretion system baseplate subunit TssK;protein_id=WP_002211664.1;transl_table=11 NZ_AAOS02000022.1 RefSeq gene 81844 82530 . + . ID=gene-YPIP275_RS18665;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=YPIP275_RS18665;old_locus_tag=YPIP275_1351 NZ_AAOS02000022.1 Protein Homology CDS 81844 82530 . + 0 ID=cds-WP_002210015.1-4;Parent=gene-YPIP275_RS18665;Dbxref=GenBank:WP_002210015.1;Name=WP_002210015.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104585.1;locus_tag=YPIP275_RS18665;product=type VI secretion system protein TssL%2C short form;protein_id=WP_002210015.1;transl_table=11 NZ_AAOS02000022.1 RefSeq pseudogene 82530 84068 . + . ID=gene-YPIP275_RS18670;Name=YPIP275_RS18670;end_range=84068,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS18670;old_locus_tag=YPIP275_1352;partial=true;pseudo=true NZ_AAOS02000022.1 Protein Homology CDS 82530 84068 . + 0 ID=cds-YPIP275_RS18670;Parent=gene-YPIP275_RS18670;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=84068,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683668.1;locus_tag=YPIP275_RS18670;partial=true;product=OmpA family protein;pseudo=true;transl_table=11 ##sequence-region NZ_AAOS02000021.1 1 84484 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000021.1 RefSeq region 1 84484 . + . ID=NZ_AAOS02000021.1:1..84484;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000021.1 RefSeq gene 229 1482 . - . ID=gene-YPIP275_RS18020;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=YPIP275_RS18020;old_locus_tag=YPIP275_1602 NZ_AAOS02000021.1 Protein Homology CDS 229 1482 . - 0 ID=cds-WP_002211552.1;Parent=gene-YPIP275_RS18020;Dbxref=GenBank:WP_002211552.1;Name=WP_002211552.1;Ontology_term=GO:0006545,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process|0006545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=YPIP275_RS18020;product=serine hydroxymethyltransferase;protein_id=WP_002211552.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 2023 3213 . + . ID=gene-YPIP275_RS18025;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS18025;old_locus_tag=YPIP275_1603 NZ_AAOS02000021.1 Protein Homology CDS 2023 3213 . + 0 ID=cds-WP_002211553.1;Parent=gene-YPIP275_RS18025;Dbxref=GenBank:WP_002211553.1;Name=WP_002211553.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase [NAD(P)H] activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005172672.1;locus_tag=YPIP275_RS18025;product=NO-inducible flavohemoprotein;protein_id=WP_002211553.1;transl_table=11 NZ_AAOS02000021.1 RefSeq pseudogene 3677 4577 . + . ID=gene-YPIP275_RS28890;Name=yhfZ;gbkey=Gene;gene=yhfZ;gene_biotype=pseudogene;locus_tag=YPIP275_RS28890;old_locus_tag=YPIP275_1604;pseudo=true NZ_AAOS02000021.1 Protein Homology CDS 3677 4577 . + 0 ID=cds-YPIP275_RS28890;Parent=gene-YPIP275_RS28890;Note=frameshifted;gbkey=CDS;gene=yhfZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081838.1;locus_tag=YPIP275_RS28890;product=GntR family transcriptional regulator YhfZ;pseudo=true;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 4746 5084 . - . ID=gene-YPIP275_RS18040;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=YPIP275_RS18040;old_locus_tag=YPIP275_1605 NZ_AAOS02000021.1 Protein Homology CDS 4746 5084 . - 0 ID=cds-WP_002211554.1;Parent=gene-YPIP275_RS18040;Dbxref=GenBank:WP_002211554.1;Name=WP_002211554.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311446.1;locus_tag=YPIP275_RS18040;product=nitrogen regulatory protein P-II;protein_id=WP_002211554.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 5099 6721 . - . ID=gene-YPIP275_RS18045;Name=YPIP275_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18045;old_locus_tag=YPIP275_1606 NZ_AAOS02000021.1 Protein Homology CDS 5099 6721 . - 0 ID=cds-WP_002211555.1;Parent=gene-YPIP275_RS18045;Dbxref=GenBank:WP_002211555.1;Name=WP_002211555.1;Ontology_term=GO:0009435,GO:0003952,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,ATP binding|0005524||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211555.1;locus_tag=YPIP275_RS18045;product=NAD+ synthase;protein_id=WP_002211555.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 6881 8218 . - . ID=gene-YPIP275_RS18050;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=YPIP275_RS18050;old_locus_tag=YPIP275_1607 NZ_AAOS02000021.1 Protein Homology CDS 6881 8218 . - 0 ID=cds-WP_002211556.1;Parent=gene-YPIP275_RS18050;Dbxref=GenBank:WP_002211556.1;Name=WP_002211556.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216116.1;locus_tag=YPIP275_RS18050;product=two-component system response regulator GlrR;protein_id=WP_002211556.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 8181 9233 . - . ID=gene-YPIP275_RS18055;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=YPIP275_RS18055;old_locus_tag=YPIP275_1608 NZ_AAOS02000021.1 Protein Homology CDS 8181 9233 . - 0 ID=cds-WP_373365126.1;Parent=gene-YPIP275_RS18055;Dbxref=GenBank:WP_373365126.1;Name=WP_373365126.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704016.1;locus_tag=YPIP275_RS18055;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_373365126.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 9252 10688 . - . ID=gene-YPIP275_RS18060;Name=YPIP275_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18060;old_locus_tag=YPIP275_1609 NZ_AAOS02000021.1 Protein Homology CDS 9252 10688 . - 0 ID=cds-WP_002216114.1;Parent=gene-YPIP275_RS18060;Dbxref=GenBank:WP_002216114.1;Name=WP_002216114.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192820.1;locus_tag=YPIP275_RS18060;product=sensor histidine kinase;protein_id=WP_002216114.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 10909 11367 . - . ID=gene-YPIP275_RS18065;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS18065;old_locus_tag=YPIP275_1610 NZ_AAOS02000021.1 Protein Homology CDS 10909 11367 . - 0 ID=cds-WP_002213759.1-6;Parent=gene-YPIP275_RS18065;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS18065;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 11357 11581 . - . ID=gene-YPIP275_RS18070;Name=YPIP275_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18070 NZ_AAOS02000021.1 GeneMarkS-2+ CDS 11357 11581 . - 0 ID=cds-WP_002216113.1;Parent=gene-YPIP275_RS18070;Dbxref=GenBank:WP_002216113.1;Name=WP_002216113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS18070;product=hypothetical protein;protein_id=WP_002216113.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 12594 13154 . + . ID=gene-YPIP275_RS18075;Name=YPIP275_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18075;old_locus_tag=YPIP275_1611 NZ_AAOS02000021.1 Protein Homology CDS 12594 13154 . + 0 ID=cds-WP_002211559.1;Parent=gene-YPIP275_RS18075;Dbxref=GenBank:WP_002211559.1;Name=WP_002211559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211559.1;locus_tag=YPIP275_RS18075;product=hypothetical protein;protein_id=WP_002211559.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 13606 14055 . + . ID=gene-YPIP275_RS18080;Name=YPIP275_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18080;old_locus_tag=YPIP275_1612 NZ_AAOS02000021.1 Protein Homology CDS 13606 14055 . + 0 ID=cds-WP_002211560.1;Parent=gene-YPIP275_RS18080;Dbxref=GenBank:WP_002211560.1;Name=WP_002211560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303837.1;locus_tag=YPIP275_RS18080;product=hypothetical protein;protein_id=WP_002211560.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 14363 14470 . + . ID=gene-YPIP275_RS27680;Name=YPIP275_RS27680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27680 NZ_AAOS02000021.1 Protein Homology CDS 14363 14470 . + 0 ID=cds-WP_032487261.1;Parent=gene-YPIP275_RS27680;Dbxref=GenBank:WP_032487261.1;Name=WP_032487261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430096.1;locus_tag=YPIP275_RS27680;product=hypothetical protein;protein_id=WP_032487261.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 14467 18357 . - . ID=gene-YPIP275_RS18085;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=YPIP275_RS18085;old_locus_tag=YPIP275_1613 NZ_AAOS02000021.1 Protein Homology CDS 14467 18357 . - 0 ID=cds-WP_002211561.1;Parent=gene-YPIP275_RS18085;Dbxref=GenBank:WP_002211561.1;Name=WP_002211561.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083727.1;locus_tag=YPIP275_RS18085;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_002211561.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 18673 20133 . + . ID=gene-YPIP275_RS18090;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=YPIP275_RS18090;old_locus_tag=YPIP275_1614 NZ_AAOS02000021.1 Protein Homology CDS 18673 20133 . + 0 ID=cds-WP_002211562.1;Parent=gene-YPIP275_RS18090;Dbxref=GenBank:WP_002211562.1;Name=WP_002211562.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005172712.1;locus_tag=YPIP275_RS18090;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_002211562.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 20242 20844 . - . ID=gene-YPIP275_RS18095;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=YPIP275_RS18095;old_locus_tag=YPIP275_1615 NZ_AAOS02000021.1 Protein Homology CDS 20242 20844 . - 0 ID=cds-WP_002211563.1;Parent=gene-YPIP275_RS18095;Dbxref=GenBank:WP_002211563.1;Name=WP_002211563.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211563.1;locus_tag=YPIP275_RS18095;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_002211563.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 20915 21610 . - . ID=gene-YPIP275_RS18100;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=YPIP275_RS18100;old_locus_tag=YPIP275_1616 NZ_AAOS02000021.1 Protein Homology CDS 20915 21610 . - 0 ID=cds-WP_002211564.1;Parent=gene-YPIP275_RS18100;Dbxref=GenBank:WP_002211564.1;Name=WP_002211564.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211564.1;locus_tag=YPIP275_RS18100;product=phosphatidylglycerophosphatase C;protein_id=WP_002211564.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 21837 22724 . - . ID=gene-YPIP275_RS18105;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS18105;old_locus_tag=YPIP275_1617 NZ_AAOS02000021.1 Protein Homology CDS 21837 22724 . - 0 ID=cds-WP_002211565.1;Parent=gene-YPIP275_RS18105;Dbxref=GenBank:WP_002211565.1;Name=WP_002211565.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650304.1;locus_tag=YPIP275_RS18105;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_002211565.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 22932 23771 . + . ID=gene-YPIP275_RS18110;Name=YPIP275_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18110;old_locus_tag=YPIP275_1618 NZ_AAOS02000021.1 Protein Homology CDS 22932 23771 . + 0 ID=cds-WP_002211566.1;Parent=gene-YPIP275_RS18110;Dbxref=GenBank:WP_002211566.1;Name=WP_002211566.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211566.1;locus_tag=YPIP275_RS18110;product=MurR/RpiR family transcriptional regulator;protein_id=WP_002211566.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 23933 24193 . + . ID=gene-YPIP275_RS18115;Name=YPIP275_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18115;old_locus_tag=YPIP275_1619 NZ_AAOS02000021.1 Protein Homology CDS 23933 24193 . + 0 ID=cds-WP_002211567.1;Parent=gene-YPIP275_RS18115;Dbxref=GenBank:WP_002211567.1;Name=WP_002211567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417057.1;locus_tag=YPIP275_RS18115;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_002211567.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 24349 24807 . - . ID=gene-YPIP275_RS18120;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS18120;old_locus_tag=YPIP275_1620 NZ_AAOS02000021.1 Protein Homology CDS 24349 24807 . - 0 ID=cds-WP_002213775.1-14;Parent=gene-YPIP275_RS18120;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS18120;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 25009 25389 . - . ID=gene-YPIP275_RS18130;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=YPIP275_RS18130;old_locus_tag=YPIP275_1621 NZ_AAOS02000021.1 Protein Homology CDS 25009 25389 . - 0 ID=cds-WP_002211568.1;Parent=gene-YPIP275_RS18130;Dbxref=GenBank:WP_002211568.1;Name=WP_002211568.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005172734.1;locus_tag=YPIP275_RS18130;product=holo-ACP synthase;protein_id=WP_002211568.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 25389 26120 . - . ID=gene-YPIP275_RS18135;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS18135;old_locus_tag=YPIP275_1622 NZ_AAOS02000021.1 Protein Homology CDS 25389 26120 . - 0 ID=cds-WP_002211569.1;Parent=gene-YPIP275_RS18135;Dbxref=GenBank:WP_002211569.1;Name=WP_002211569.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192826.1;locus_tag=YPIP275_RS18135;product=pyridoxine 5'-phosphate synthase;protein_id=WP_002211569.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 26310 27092 . - . ID=gene-YPIP275_RS18140;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS18140;old_locus_tag=YPIP275_1623 NZ_AAOS02000021.1 Protein Homology CDS 26310 27092 . - 0 ID=cds-WP_001317493.1-16;Parent=gene-YPIP275_RS18140;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS18140;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 27089 28111 . - . ID=gene-YPIP275_RS18145;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS18145;old_locus_tag=YPIP275_1624 NZ_AAOS02000021.1 Protein Homology CDS 27089 28111 . - 0 ID=cds-WP_000255944.1-12;Parent=gene-YPIP275_RS18145;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS18145;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000021.1 RefSeq pseudogene 28197 28793 . - . ID=gene-YPIP275_RS18150;Name=YPIP275_RS18150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS18150;old_locus_tag=YPIP275_1625;partial=true;pseudo=true;start_range=.,28197 NZ_AAOS02000021.1 Protein Homology CDS 28197 28793 . - 0 ID=cds-YPIP275_RS18150;Parent=gene-YPIP275_RS18150;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816670.1;locus_tag=YPIP275_RS18150;partial=true;product=DotU/TssL family secretion system protein;pseudo=true;start_range=.,28197;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 28790 30139 . - . ID=gene-YPIP275_RS18155;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=YPIP275_RS18155;old_locus_tag=YPIP275_1626 NZ_AAOS02000021.1 Protein Homology CDS 28790 30139 . - 0 ID=cds-WP_002211571.1;Parent=gene-YPIP275_RS18155;Dbxref=GenBank:WP_002211571.1;Name=WP_002211571.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080948.1;locus_tag=YPIP275_RS18155;product=type VI secretion system baseplate subunit TssK;protein_id=WP_002211571.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 30143 30682 . - . ID=gene-YPIP275_RS18160;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS18160;old_locus_tag=YPIP275_1627 NZ_AAOS02000021.1 Protein Homology CDS 30143 30682 . - 0 ID=cds-WP_002211572.1;Parent=gene-YPIP275_RS18160;Dbxref=GenBank:WP_002211572.1;Name=WP_002211572.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211572.1;locus_tag=YPIP275_RS18160;product=type VI secretion system lipoprotein TssJ;protein_id=WP_002211572.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 30956 31441 . - . ID=gene-YPIP275_RS18165;Name=YPIP275_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18165;old_locus_tag=YPIP275_1628 NZ_AAOS02000021.1 Protein Homology CDS 30956 31441 . - 0 ID=cds-WP_002211573.1;Parent=gene-YPIP275_RS18165;Dbxref=GenBank:WP_002211573.1;Name=WP_002211573.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211573.1;locus_tag=YPIP275_RS18165;product=Hcp family type VI secretion system effector;protein_id=WP_002211573.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 31767 33269 . - . ID=gene-YPIP275_RS18170;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=YPIP275_RS18170;old_locus_tag=YPIP275_1629 NZ_AAOS02000021.1 Protein Homology CDS 31767 33269 . - 0 ID=cds-WP_002211574.1;Parent=gene-YPIP275_RS18170;Dbxref=GenBank:WP_002211574.1;Name=WP_002211574.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002404159.1;locus_tag=YPIP275_RS18170;product=type VI secretion system contractile sheath large subunit;protein_id=WP_002211574.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 33293 33817 . - . ID=gene-YPIP275_RS18175;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=YPIP275_RS18175;old_locus_tag=YPIP275_1630 NZ_AAOS02000021.1 Protein Homology CDS 33293 33817 . - 0 ID=cds-WP_002211575.1;Parent=gene-YPIP275_RS18175;Dbxref=GenBank:WP_002211575.1;Name=WP_002211575.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211575.1;locus_tag=YPIP275_RS18175;product=type VI secretion system contractile sheath small subunit;protein_id=WP_002211575.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 33922 34530 . - . ID=gene-YPIP275_RS18180;Name=YPIP275_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18180;old_locus_tag=YPIP275_1631 NZ_AAOS02000021.1 Protein Homology CDS 33922 34530 . - 0 ID=cds-WP_002211576.1;Parent=gene-YPIP275_RS18180;Dbxref=GenBank:WP_002211576.1;Name=WP_002211576.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192708.1;locus_tag=YPIP275_RS18180;product=fimbrial protein;protein_id=WP_002211576.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 34515 35705 . - . ID=gene-YPIP275_RS18185;Name=YPIP275_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18185;old_locus_tag=YPIP275_1632 NZ_AAOS02000021.1 Protein Homology CDS 34515 35705 . - 0 ID=cds-WP_002211577.1;Parent=gene-YPIP275_RS18185;Dbxref=GenBank:WP_002211577.1;Name=WP_002211577.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211577.1;locus_tag=YPIP275_RS18185;product=fimbria/pilus outer membrane usher protein;protein_id=WP_002211577.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 35730 36938 . + . ID=gene-YPIP275_RS18190;Name=YPIP275_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18190;old_locus_tag=YPIP275_1633 NZ_AAOS02000021.1 Protein Homology CDS 35730 36938 . + 0 ID=cds-WP_002209743.1-12;Parent=gene-YPIP275_RS18190;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS18190;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 36960 38510 . - . ID=gene-YPIP275_RS18195;Name=YPIP275_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18195;old_locus_tag=YPIP275_1634 NZ_AAOS02000021.1 Protein Homology CDS 36960 38510 . - 0 ID=cds-WP_002215157.1;Parent=gene-YPIP275_RS18195;Dbxref=GenBank:WP_002215157.1;Name=WP_002215157.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231031.1;locus_tag=YPIP275_RS18195;product=fimbria/pilus outer membrane usher protein;protein_id=WP_002215157.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 38638 39399 . - . ID=gene-YPIP275_RS18200;Name=YPIP275_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18200;old_locus_tag=YPIP275_1635 NZ_AAOS02000021.1 Protein Homology CDS 38638 39399 . - 0 ID=cds-WP_002211579.1;Parent=gene-YPIP275_RS18200;Dbxref=GenBank:WP_002211579.1;Name=WP_002211579.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303908.1;locus_tag=YPIP275_RS18200;product=fimbria/pilus periplasmic chaperone;protein_id=WP_002211579.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 39556 40101 . - . ID=gene-YPIP275_RS18205;Name=YPIP275_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18205;old_locus_tag=YPIP275_1636 NZ_AAOS02000021.1 Protein Homology CDS 39556 40101 . - 0 ID=cds-WP_002211580.1;Parent=gene-YPIP275_RS18205;Dbxref=GenBank:WP_002211580.1;Name=WP_002211580.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104867.1;locus_tag=YPIP275_RS18205;product=fimbrial protein;protein_id=WP_002211580.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 40302 42977 . - . ID=gene-YPIP275_RS18210;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=YPIP275_RS18210;old_locus_tag=YPIP275_1637 NZ_AAOS02000021.1 Protein Homology CDS 40302 42977 . - 0 ID=cds-WP_002215317.1;Parent=gene-YPIP275_RS18210;Dbxref=GenBank:WP_002215317.1;Name=WP_002215317.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229788.1;locus_tag=YPIP275_RS18210;product=type VI secretion system ATPase TssH;protein_id=WP_002215317.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 43760 45640 . + . ID=gene-YPIP275_RS18215;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=YPIP275_RS18215;old_locus_tag=YPIP275_1638 NZ_AAOS02000021.1 Protein Homology CDS 43760 45640 . + 0 ID=cds-WP_002211582.1;Parent=gene-YPIP275_RS18215;Dbxref=GenBank:WP_002211582.1;Name=WP_002211582.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875821.1;locus_tag=YPIP275_RS18215;product=type VI secretion system baseplate subunit TssF;protein_id=WP_002211582.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 45640 46665 . + . ID=gene-YPIP275_RS18220;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=YPIP275_RS18220;old_locus_tag=YPIP275_1639 NZ_AAOS02000021.1 Protein Homology CDS 45640 46665 . + 0 ID=cds-WP_002211583.1;Parent=gene-YPIP275_RS18220;Dbxref=GenBank:WP_002211583.1;Name=WP_002211583.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211583.1;locus_tag=YPIP275_RS18220;product=type VI secretion system baseplate subunit TssG;protein_id=WP_002211583.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 46764 47945 . + . ID=gene-YPIP275_RS18225;Name=YPIP275_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18225;old_locus_tag=YPIP275_1640 NZ_AAOS02000021.1 Protein Homology CDS 46764 47945 . + 0 ID=cds-WP_002211584.1;Parent=gene-YPIP275_RS18225;Dbxref=GenBank:WP_002211584.1;Name=WP_002211584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002365806.1;locus_tag=YPIP275_RS18225;product=type VI secretion system protein TssA;protein_id=WP_002211584.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 47952 48983 . + . ID=gene-YPIP275_RS18230;Name=YPIP275_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18230;old_locus_tag=YPIP275_1641 NZ_AAOS02000021.1 Protein Homology CDS 47952 48983 . + 0 ID=cds-WP_002215319.1;Parent=gene-YPIP275_RS18230;Dbxref=GenBank:WP_002215319.1;Name=WP_002215319.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192714.1;locus_tag=YPIP275_RS18230;product=fimbrial protein;protein_id=WP_002215319.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 49023 50360 . + . ID=gene-YPIP275_RS18235;Name=YPIP275_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18235;old_locus_tag=YPIP275_1642 NZ_AAOS02000021.1 Protein Homology CDS 49023 50360 . + 0 ID=cds-WP_002211586.1;Parent=gene-YPIP275_RS18235;Dbxref=GenBank:WP_002211586.1;Name=WP_002211586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256701.1;locus_tag=YPIP275_RS18235;product=GlcNAc-transferase family protein;protein_id=WP_002211586.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 50357 51040 . + . ID=gene-YPIP275_RS18240;Name=YPIP275_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18240;old_locus_tag=YPIP275_1643 NZ_AAOS02000021.1 Protein Homology CDS 50357 51040 . + 0 ID=cds-WP_002211587.1;Parent=gene-YPIP275_RS18240;Dbxref=GenBank:WP_002211587.1;Name=WP_002211587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211587.1;locus_tag=YPIP275_RS18240;product=hypothetical protein;protein_id=WP_002211587.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 51041 52723 . + . ID=gene-YPIP275_RS18245;Name=YPIP275_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18245;old_locus_tag=YPIP275_1644 NZ_AAOS02000021.1 Protein Homology CDS 51041 52723 . + 0 ID=cds-WP_002211588.1;Parent=gene-YPIP275_RS18245;Dbxref=GenBank:WP_002211588.1;Name=WP_002211588.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211588.1;locus_tag=YPIP275_RS18245;product=OmpA family protein;protein_id=WP_002211588.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 52720 53202 . + . ID=gene-YPIP275_RS18250;Name=YPIP275_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18250;old_locus_tag=YPIP275_1645 NZ_AAOS02000021.1 Protein Homology CDS 52720 53202 . + 0 ID=cds-WP_002215321.1;Parent=gene-YPIP275_RS18250;Dbxref=GenBank:WP_002215321.1;Name=WP_002215321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906313.1;locus_tag=YPIP275_RS18250;product=DcrB-related protein;protein_id=WP_002215321.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 53560 54162 . - . ID=gene-YPIP275_RS18255;Name=YPIP275_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18255;old_locus_tag=YPIP275_1646 NZ_AAOS02000021.1 Protein Homology CDS 53560 54162 . - 0 ID=cds-WP_002211590.1;Parent=gene-YPIP275_RS18255;Dbxref=GenBank:WP_002211590.1;Name=WP_002211590.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211590.1;locus_tag=YPIP275_RS18255;product=helix-turn-helix transcriptional regulator;protein_id=WP_002211590.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 55417 56511 . - . ID=gene-YPIP275_RS18260;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=YPIP275_RS18260;old_locus_tag=YPIP275_1650 NZ_AAOS02000021.1 Protein Homology CDS 55417 56511 . - 0 ID=cds-WP_002211594.1;Parent=gene-YPIP275_RS18260;Dbxref=GenBank:WP_002211594.1;Name=WP_002211594.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303905.1;locus_tag=YPIP275_RS18260;product=lytic murein transglycosylase B;protein_id=WP_002211594.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 56840 57859 . + . ID=gene-YPIP275_RS18265;Name=YPIP275_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18265;old_locus_tag=YPIP275_1652 NZ_AAOS02000021.1 Protein Homology CDS 56840 57859 . + 0 ID=cds-WP_002211596.1;Parent=gene-YPIP275_RS18265;Dbxref=GenBank:WP_002211596.1;Name=WP_002211596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211596.1;locus_tag=YPIP275_RS18265;product=iron ABC transporter substrate-binding protein;protein_id=WP_002211596.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 57915 59501 . + . ID=gene-YPIP275_RS18270;Name=YPIP275_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18270;old_locus_tag=YPIP275_1653 NZ_AAOS02000021.1 Protein Homology CDS 57915 59501 . + 0 ID=cds-WP_002215840.1;Parent=gene-YPIP275_RS18270;Dbxref=GenBank:WP_002215840.1;Name=WP_002215840.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303903.1;locus_tag=YPIP275_RS18270;product=ABC transporter permease;protein_id=WP_002215840.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 59498 60547 . + . ID=gene-YPIP275_RS18275;Name=YPIP275_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18275;old_locus_tag=YPIP275_1654 NZ_AAOS02000021.1 Protein Homology CDS 59498 60547 . + 0 ID=cds-WP_002211598.1;Parent=gene-YPIP275_RS18275;Dbxref=GenBank:WP_002211598.1;Name=WP_002211598.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211598.1;locus_tag=YPIP275_RS18275;product=ABC transporter ATP-binding protein;protein_id=WP_002211598.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 60620 61144 . - . ID=gene-YPIP275_RS18280;Name=YPIP275_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18280;old_locus_tag=YPIP275_1655 NZ_AAOS02000021.1 Protein Homology CDS 60620 61144 . - 0 ID=cds-WP_002211599.1;Parent=gene-YPIP275_RS18280;Dbxref=GenBank:WP_002211599.1;Name=WP_002211599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211599.1;locus_tag=YPIP275_RS18280;product=DUF2127 domain-containing protein;protein_id=WP_002211599.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 61611 62090 . + . ID=gene-YPIP275_RS18285;Name=YPIP275_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18285 NZ_AAOS02000021.1 Protein Homology CDS 61611 62090 . + 0 ID=cds-WP_002354621.1;Parent=gene-YPIP275_RS18285;Dbxref=GenBank:WP_002354621.1;Name=WP_002354621.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354621.1;locus_tag=YPIP275_RS18285;product=Hcp family type VI secretion system effector;protein_id=WP_002354621.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 62320 63168 . - . ID=gene-YPIP275_RS18290;Name=YPIP275_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18290;old_locus_tag=YPIP275_1657 NZ_AAOS02000021.1 Protein Homology CDS 62320 63168 . - 0 ID=cds-WP_002211601.1;Parent=gene-YPIP275_RS18290;Dbxref=GenBank:WP_002211601.1;Name=WP_002211601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192723.1;locus_tag=YPIP275_RS18290;product=DUF4225 domain-containing protein;protein_id=WP_002211601.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 63999 66425 . + . ID=gene-YPIP275_RS18295;Name=YPIP275_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18295;old_locus_tag=YPIP275_1658 NZ_AAOS02000021.1 Protein Homology CDS 63999 66425 . + 0 ID=cds-WP_002211602.1;Parent=gene-YPIP275_RS18295;Dbxref=GenBank:WP_002211602.1;Name=WP_002211602.1;Ontology_term=GO:0009061,GO:0009055,GO:0009389,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211602.1;locus_tag=YPIP275_RS18295;product=DmsA/YnfE/YnfF family dimethyl sulfoxide reductase;protein_id=WP_002211602.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 66437 67054 . + . ID=gene-YPIP275_RS18300;Name=YPIP275_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18300;old_locus_tag=YPIP275_1659 NZ_AAOS02000021.1 Protein Homology CDS 66437 67054 . + 0 ID=cds-WP_002211603.1;Parent=gene-YPIP275_RS18300;Dbxref=GenBank:WP_002211603.1;Name=WP_002211603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005183646.1;locus_tag=YPIP275_RS18300;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_002211603.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 67056 67832 . + . ID=gene-YPIP275_RS18305;Name=YPIP275_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18305;old_locus_tag=YPIP275_1660 NZ_AAOS02000021.1 Protein Homology CDS 67056 67832 . + 0 ID=cds-WP_002211604.1;Parent=gene-YPIP275_RS18305;Dbxref=GenBank:WP_002211604.1;Name=WP_002211604.1;Ontology_term=GO:0019645,GO:0009389,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192725.1;locus_tag=YPIP275_RS18305;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_002211604.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 68314 68910 . + . ID=gene-YPIP275_RS18310;Name=YPIP275_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18310;old_locus_tag=YPIP275_1661 NZ_AAOS02000021.1 Protein Homology CDS 68314 68910 . + 0 ID=cds-WP_002228419.1;Parent=gene-YPIP275_RS18310;Dbxref=GenBank:WP_002228419.1;Name=WP_002228419.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228419.1;locus_tag=YPIP275_RS18310;product=TorD/DmsD family molecular chaperone;protein_id=WP_002228419.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 68907 69476 . + . ID=gene-YPIP275_RS18315;Name=YPIP275_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18315;old_locus_tag=YPIP275_1662 NZ_AAOS02000021.1 Protein Homology CDS 68907 69476 . + 0 ID=cds-WP_002211606.1;Parent=gene-YPIP275_RS18315;Dbxref=GenBank:WP_002211606.1;Name=WP_002211606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211606.1;locus_tag=YPIP275_RS18315;product=4Fe-4S binding protein;protein_id=WP_002211606.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 69722 70378 . - . ID=gene-YPIP275_RS18320;Name=YPIP275_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18320;old_locus_tag=YPIP275_1663 NZ_AAOS02000021.1 Protein Homology CDS 69722 70378 . - 0 ID=cds-WP_002211607.1;Parent=gene-YPIP275_RS18320;Dbxref=GenBank:WP_002211607.1;Name=WP_002211607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211607.1;locus_tag=YPIP275_RS18320;product=DUF799 domain-containing protein;protein_id=WP_002211607.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 70375 70731 . - . ID=gene-YPIP275_RS18325;Name=YPIP275_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18325;old_locus_tag=YPIP275_1664 NZ_AAOS02000021.1 Protein Homology CDS 70375 70731 . - 0 ID=cds-WP_002215846.1;Parent=gene-YPIP275_RS18325;Dbxref=GenBank:WP_002215846.1;Name=WP_002215846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215846.1;locus_tag=YPIP275_RS18325;product=DUF4810 domain-containing protein;protein_id=WP_002215846.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 70758 71429 . - . ID=gene-YPIP275_RS18330;Name=YPIP275_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18330;old_locus_tag=YPIP275_1665 NZ_AAOS02000021.1 Protein Homology CDS 70758 71429 . - 0 ID=cds-WP_002215847.1;Parent=gene-YPIP275_RS18330;Dbxref=GenBank:WP_002215847.1;Name=WP_002215847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215847.1;locus_tag=YPIP275_RS18330;product=CsgG/HfaB family protein;protein_id=WP_002215847.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 72019 72450 . + . ID=gene-YPIP275_RS18335;Name=YPIP275_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18335;old_locus_tag=YPIP275_1666 NZ_AAOS02000021.1 Protein Homology CDS 72019 72450 . + 0 ID=cds-WP_002211610.1;Parent=gene-YPIP275_RS18335;Dbxref=GenBank:WP_002211610.1;Name=WP_002211610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192728.1;locus_tag=YPIP275_RS18335;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_002211610.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 72545 73069 . - . ID=gene-YPIP275_RS18340;Name=YPIP275_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18340;old_locus_tag=YPIP275_1667 NZ_AAOS02000021.1 Protein Homology CDS 72545 73069 . - 0 ID=cds-WP_002211611.1;Parent=gene-YPIP275_RS18340;Dbxref=GenBank:WP_002211611.1;Name=WP_002211611.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211611.1;locus_tag=YPIP275_RS18340;product=cytochrome b;protein_id=WP_002211611.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 73333 74568 . - . ID=gene-YPIP275_RS18345;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=YPIP275_RS18345;old_locus_tag=YPIP275_1669 NZ_AAOS02000021.1 Protein Homology CDS 73333 74568 . - 0 ID=cds-WP_002211613.1;Parent=gene-YPIP275_RS18345;Dbxref=GenBank:WP_002211613.1;Name=WP_002211613.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231034.1;locus_tag=YPIP275_RS18345;product=alanine transaminase;protein_id=WP_002211613.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 74834 76081 . + . ID=gene-YPIP275_RS18350;Name=YPIP275_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18350;old_locus_tag=YPIP275_1670 NZ_AAOS02000021.1 Protein Homology CDS 74834 76081 . + 0 ID=cds-WP_002211614.1;Parent=gene-YPIP275_RS18350;Dbxref=GenBank:WP_002211614.1;Name=WP_002211614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211614.1;locus_tag=YPIP275_RS18350;product=DUF1479 domain-containing protein;protein_id=WP_002211614.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 76159 77130 . - . ID=gene-YPIP275_RS18355;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=YPIP275_RS18355;old_locus_tag=YPIP275_1671 NZ_AAOS02000021.1 Protein Homology CDS 76159 77130 . - 0 ID=cds-WP_002211615.1;Parent=gene-YPIP275_RS18355;Dbxref=GenBank:WP_002211615.1;Name=WP_002211615.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211615.1;locus_tag=YPIP275_RS18355;product=glucokinase;protein_id=WP_002211615.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 77311 77787 . - . ID=gene-YPIP275_RS18360;Name=YPIP275_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18360;old_locus_tag=YPIP275_1672 NZ_AAOS02000021.1 Protein Homology CDS 77311 77787 . - 0 ID=cds-WP_002211616.1;Parent=gene-YPIP275_RS18360;Dbxref=GenBank:WP_002211616.1;Name=WP_002211616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413824.1;locus_tag=YPIP275_RS18360;product=multidrug/biocide efflux PACE transporter;protein_id=WP_002211616.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 77890 78768 . + . ID=gene-YPIP275_RS18365;Name=YPIP275_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18365;old_locus_tag=YPIP275_1673 NZ_AAOS02000021.1 Protein Homology CDS 77890 78768 . + 0 ID=cds-WP_002211617.1;Parent=gene-YPIP275_RS18365;Dbxref=GenBank:WP_002211617.1;Name=WP_002211617.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211617.1;locus_tag=YPIP275_RS18365;product=LysR family transcriptional regulator;protein_id=WP_002211617.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 78904 79893 . + . ID=gene-YPIP275_RS18370;Name=YPIP275_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18370;old_locus_tag=YPIP275_1674 NZ_AAOS02000021.1 Protein Homology CDS 78904 79893 . + 0 ID=cds-WP_002211618.1;Parent=gene-YPIP275_RS18370;Dbxref=GenBank:WP_002211618.1;Name=WP_002211618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002232425.1;locus_tag=YPIP275_RS18370;product=aldo/keto reductase;protein_id=WP_002211618.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 80163 80477 . + . ID=gene-YPIP275_RS18375;Name=YPIP275_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18375;old_locus_tag=YPIP275_1676 NZ_AAOS02000021.1 Protein Homology CDS 80163 80477 . + 0 ID=cds-WP_002354622.1;Parent=gene-YPIP275_RS18375;Dbxref=GenBank:WP_002354622.1;Name=WP_002354622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011055411.1;locus_tag=YPIP275_RS18375;product=DUF2502 domain-containing protein;protein_id=WP_002354622.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 80570 81799 . - . ID=gene-YPIP275_RS18380;Name=YPIP275_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18380;old_locus_tag=YPIP275_1677 NZ_AAOS02000021.1 Protein Homology CDS 80570 81799 . - 0 ID=cds-WP_002211621.1;Parent=gene-YPIP275_RS18380;Dbxref=GenBank:WP_002211621.1;Name=WP_002211621.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815865.1;locus_tag=YPIP275_RS18380;product=Nramp family divalent metal transporter;protein_id=WP_002211621.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 82234 83418 . + . ID=gene-YPIP275_RS18385;Name=YPIP275_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS18385;old_locus_tag=YPIP275_1678 NZ_AAOS02000021.1 Protein Homology CDS 82234 83418 . + 0 ID=cds-WP_002211622.1;Parent=gene-YPIP275_RS18385;Dbxref=GenBank:WP_002211622.1;Name=WP_002211622.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266624.1;locus_tag=YPIP275_RS18385;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_002211622.1;transl_table=11 NZ_AAOS02000021.1 RefSeq gene 83625 83750 . - . ID=gene-YPIP275_RS26445;Name=YPIP275_RS26445;gbkey=Gene;gene_biotype=ncRNA;locus_tag=YPIP275_RS26445 NZ_AAOS02000021.1 cmsearch ncRNA 83625 83750 . - . ID=rna-YPIP275_RS26445;Parent=gene-YPIP275_RS26445;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS26445;product=RtT sRNA NZ_AAOS02000021.1 cmsearch exon 83625 83750 . - . ID=exon-YPIP275_RS26445-1;Parent=rna-YPIP275_RS26445;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS26445;product=RtT sRNA NZ_AAOS02000021.1 RefSeq gene 83795 83870 . - . ID=gene-YPIP275_RS18390;Name=YPIP275_RS18390;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS18390;old_locus_tag=YPIP275_1679 NZ_AAOS02000021.1 tRNAscan-SE tRNA 83795 83870 . - . ID=rna-YPIP275_RS18390;Parent=gene-YPIP275_RS18390;anticodon=(pos:complement(83835..83837));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS18390;product=tRNA-Lys NZ_AAOS02000021.1 tRNAscan-SE exon 83795 83870 . - . ID=exon-YPIP275_RS18390-1;Parent=rna-YPIP275_RS18390;anticodon=(pos:complement(83835..83837));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS18390;product=tRNA-Lys NZ_AAOS02000021.1 RefSeq gene 83897 84029 . - . ID=gene-YPIP275_RS27690;Name=YPIP275_RS27690;gbkey=Gene;gene_biotype=ncRNA;locus_tag=YPIP275_RS27690 NZ_AAOS02000021.1 cmsearch ncRNA 83897 84029 . - . ID=rna-YPIP275_RS27690;Parent=gene-YPIP275_RS27690;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS27690;product=RtT sRNA NZ_AAOS02000021.1 cmsearch exon 83897 84029 . - . ID=exon-YPIP275_RS27690-1;Parent=rna-YPIP275_RS27690;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS27690;product=RtT sRNA NZ_AAOS02000021.1 RefSeq gene 84070 84145 . - . ID=gene-YPIP275_RS18395;Name=YPIP275_RS18395;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS18395;old_locus_tag=YPIP275_1680 NZ_AAOS02000021.1 tRNAscan-SE tRNA 84070 84145 . - . ID=rna-YPIP275_RS18395;Parent=gene-YPIP275_RS18395;anticodon=(pos:complement(84110..84112));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS18395;product=tRNA-Val NZ_AAOS02000021.1 tRNAscan-SE exon 84070 84145 . - . ID=exon-YPIP275_RS18395-1;Parent=rna-YPIP275_RS18395;anticodon=(pos:complement(84110..84112));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS18395;product=tRNA-Val NZ_AAOS02000021.1 RefSeq gene 84190 84265 . - . ID=gene-YPIP275_RS18400;Name=YPIP275_RS18400;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS18400;old_locus_tag=YPIP275_1681 NZ_AAOS02000021.1 tRNAscan-SE tRNA 84190 84265 . - . ID=rna-YPIP275_RS18400;Parent=gene-YPIP275_RS18400;anticodon=(pos:complement(84230..84232));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS18400;product=tRNA-Val NZ_AAOS02000021.1 tRNAscan-SE exon 84190 84265 . - . ID=exon-YPIP275_RS18400-1;Parent=rna-YPIP275_RS18400;anticodon=(pos:complement(84230..84232));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS18400;product=tRNA-Val NZ_AAOS02000021.1 RefSeq gene 84302 84377 . - . ID=gene-YPIP275_RS18405;Name=YPIP275_RS18405;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS18405;old_locus_tag=YPIP275_1682 NZ_AAOS02000021.1 tRNAscan-SE tRNA 84302 84377 . - . ID=rna-YPIP275_RS18405;Parent=gene-YPIP275_RS18405;anticodon=(pos:complement(84342..84344));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS18405;product=tRNA-Val NZ_AAOS02000021.1 tRNAscan-SE exon 84302 84377 . - . ID=exon-YPIP275_RS18405-1;Parent=rna-YPIP275_RS18405;anticodon=(pos:complement(84342..84344));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS18405;product=tRNA-Val ##sequence-region NZ_AAOS02000020.1 1 100945 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000020.1 RefSeq region 1 100945 . + . ID=NZ_AAOS02000020.1:1..100945;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000020.1 RefSeq gene 273 731 . + . ID=gene-YPIP275_RS17515;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS17515;old_locus_tag=YPIP275_3075 NZ_AAOS02000020.1 Protein Homology CDS 273 731 . + 0 ID=cds-WP_002213759.1-7;Parent=gene-YPIP275_RS17515;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS17515;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 924 2144 . - . ID=gene-YPIP275_RS17520;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=YPIP275_RS17520;old_locus_tag=YPIP275_3076 NZ_AAOS02000020.1 Protein Homology CDS 924 2144 . - 0 ID=cds-WP_002211462.1;Parent=gene-YPIP275_RS17520;Dbxref=GenBank:WP_002211462.1;Name=WP_002211462.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104303.1;locus_tag=YPIP275_RS17520;product=protoheme IX biogenesis protein HemY;protein_id=WP_002211462.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 2147 3271 . - . ID=gene-YPIP275_RS17525;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=YPIP275_RS17525;old_locus_tag=YPIP275_3077 NZ_AAOS02000020.1 Protein Homology CDS 2147 3271 . - 0 ID=cds-WP_002211463.1;Parent=gene-YPIP275_RS17525;Dbxref=GenBank:WP_002211463.1;Name=WP_002211463.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191506.1;locus_tag=YPIP275_RS17525;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_002211463.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 3302 4051 . - . ID=gene-YPIP275_RS17530;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=YPIP275_RS17530;old_locus_tag=YPIP275_3078 NZ_AAOS02000020.1 Protein Homology CDS 3302 4051 . - 0 ID=cds-WP_002211464.1;Parent=gene-YPIP275_RS17530;Dbxref=GenBank:WP_002211464.1;Name=WP_002211464.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211464.1;locus_tag=YPIP275_RS17530;product=uroporphyrinogen-III synthase;protein_id=WP_002211464.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 4048 4989 . - . ID=gene-YPIP275_RS17535;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=YPIP275_RS17535;old_locus_tag=YPIP275_3079 NZ_AAOS02000020.1 Protein Homology CDS 4048 4989 . - 0 ID=cds-WP_002211465.1;Parent=gene-YPIP275_RS17535;Dbxref=GenBank:WP_002211465.1;Name=WP_002211465.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211465.1;locus_tag=YPIP275_RS17535;product=hydroxymethylbilane synthase;protein_id=WP_002211465.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 5210 5410 . - . ID=gene-YPIP275_RS27665;Name=YPIP275_RS27665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27665;old_locus_tag=YPIP275_3081 NZ_AAOS02000020.1 Protein Homology CDS 5210 5410 . - 0 ID=cds-WP_002211467.1;Parent=gene-YPIP275_RS27665;Dbxref=GenBank:WP_002211467.1;Name=WP_002211467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211467.1;locus_tag=YPIP275_RS27665;product=hypothetical protein;protein_id=WP_002211467.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 5483 8035 . + . ID=gene-YPIP275_RS17540;Name=YPIP275_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17540;old_locus_tag=YPIP275_3082 NZ_AAOS02000020.1 Protein Homology CDS 5483 8035 . + 0 ID=cds-WP_002211468.1;Parent=gene-YPIP275_RS17540;Dbxref=GenBank:WP_002211468.1;Name=WP_002211468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683523.1;locus_tag=YPIP275_RS17540;product=class I adenylate cyclase;protein_id=WP_002211468.1;transl_table=11 NZ_AAOS02000020.1 RefSeq pseudogene 8076 8144 . - . ID=gene-YPIP275_RS29260;Name=YPIP275_RS29260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29260;partial=true;pseudo=true;start_range=.,8076 NZ_AAOS02000020.1 Protein Homology CDS 8076 8144 . - 0 ID=cds-YPIP275_RS29260;Parent=gene-YPIP275_RS29260;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378124.1;locus_tag=YPIP275_RS29260;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;start_range=.,8076;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 8279 8599 . - . ID=gene-YPIP275_RS17545;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=YPIP275_RS17545;old_locus_tag=YPIP275_3083 NZ_AAOS02000020.1 Protein Homology CDS 8279 8599 . - 0 ID=cds-WP_002211469.1;Parent=gene-YPIP275_RS17545;Dbxref=GenBank:WP_002211469.1;Name=WP_002211469.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304732.1;locus_tag=YPIP275_RS17545;product=iron donor protein CyaY;protein_id=WP_002211469.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 8751 8939 . + . ID=gene-YPIP275_RS17550;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=YPIP275_RS17550;old_locus_tag=YPIP275_3084 NZ_AAOS02000020.1 Protein Homology CDS 8751 8939 . + 0 ID=cds-WP_002211470.1;Parent=gene-YPIP275_RS17550;Dbxref=GenBank:WP_002211470.1;Name=WP_002211470.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211470.1;locus_tag=YPIP275_RS17550;product=LPS translocon maturation chaperone LptM;protein_id=WP_002211470.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 9123 9947 . + . ID=gene-YPIP275_RS17555;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=YPIP275_RS17555;old_locus_tag=YPIP275_3085 NZ_AAOS02000020.1 Protein Homology CDS 9123 9947 . + 0 ID=cds-WP_002211471.1;Parent=gene-YPIP275_RS17555;Dbxref=GenBank:WP_002211471.1;Name=WP_002211471.1;Ontology_term=GO:0009085,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=YPIP275_RS17555;product=diaminopimelate epimerase;protein_id=WP_002211471.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 10012 10716 . + . ID=gene-YPIP275_RS17560;Name=YPIP275_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17560;old_locus_tag=YPIP275_3086 NZ_AAOS02000020.1 Protein Homology CDS 10012 10716 . + 0 ID=cds-WP_002211472.1;Parent=gene-YPIP275_RS17560;Dbxref=GenBank:WP_002211472.1;Name=WP_002211472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211472.1;locus_tag=YPIP275_RS17560;product=DUF484 domain-containing protein;protein_id=WP_002211472.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 10713 11624 . + . ID=gene-YPIP275_RS17565;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=YPIP275_RS17565;old_locus_tag=YPIP275_3087 NZ_AAOS02000020.1 Protein Homology CDS 10713 11624 . + 0 ID=cds-WP_002211473.1;Parent=gene-YPIP275_RS17565;Dbxref=GenBank:WP_002211473.1;Name=WP_002211473.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191512.1;locus_tag=YPIP275_RS17565;product=tyrosine recombinase XerC;protein_id=WP_002211473.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 11624 12340 . + . ID=gene-YPIP275_RS17570;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=YPIP275_RS17570;old_locus_tag=YPIP275_3088 NZ_AAOS02000020.1 Protein Homology CDS 11624 12340 . + 0 ID=cds-WP_002211474.1;Parent=gene-YPIP275_RS17570;Dbxref=GenBank:WP_002211474.1;Name=WP_002211474.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815342.1;locus_tag=YPIP275_RS17570;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_002211474.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 12442 14604 . + . ID=gene-YPIP275_RS17575;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=YPIP275_RS17575;old_locus_tag=YPIP275_3089 NZ_AAOS02000020.1 Protein Homology CDS 12442 14604 . + 0 ID=cds-WP_002211475.1;Parent=gene-YPIP275_RS17575;Dbxref=GenBank:WP_002211475.1;Name=WP_002211475.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455510.1;locus_tag=YPIP275_RS17575;product=DNA helicase II;protein_id=WP_002211475.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 14718 15404 . - . ID=gene-YPIP275_RS17580;Name=YPIP275_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17580;old_locus_tag=YPIP275_3090 NZ_AAOS02000020.1 Protein Homology CDS 14718 15404 . - 0 ID=cds-WP_002211476.1;Parent=gene-YPIP275_RS17580;Dbxref=GenBank:WP_002211476.1;Name=WP_002211476.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304730.1;locus_tag=YPIP275_RS17580;product=TetR/AcrR family transcriptional regulator;protein_id=WP_002211476.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 15832 17049 . + . ID=gene-YPIP275_RS17585;Name=YPIP275_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17585;old_locus_tag=YPIP275_3091 NZ_AAOS02000020.1 Protein Homology CDS 15832 17049 . + 0 ID=cds-WP_002211477.1;Parent=gene-YPIP275_RS17585;Dbxref=GenBank:WP_002211477.1;Name=WP_002211477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211477.1;locus_tag=YPIP275_RS17585;product=Tm-1-like ATP-binding domain-containing protein;protein_id=WP_002211477.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 17075 17905 . + . ID=gene-YPIP275_RS17590;Name=YPIP275_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17590;old_locus_tag=YPIP275_3092 NZ_AAOS02000020.1 Protein Homology CDS 17075 17905 . + 0 ID=cds-WP_002211478.1;Parent=gene-YPIP275_RS17590;Dbxref=GenBank:WP_002211478.1;Name=WP_002211478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649046.1;locus_tag=YPIP275_RS17590;product=phosphoenolpyruvate hydrolase family protein;protein_id=WP_002211478.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 18554 19504 . + . ID=gene-YPIP275_RS17595;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=YPIP275_RS17595;old_locus_tag=YPIP275_3094 NZ_AAOS02000020.1 Protein Homology CDS 18554 19504 . + 0 ID=cds-WP_002211480.1;Parent=gene-YPIP275_RS17595;Dbxref=GenBank:WP_002211480.1;Name=WP_002211480.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=YPIP275_RS17595;product=magnesium/cobalt transporter CorA;protein_id=WP_002211480.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 19602 20492 . - . ID=gene-YPIP275_RS17600;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=YPIP275_RS17600;old_locus_tag=YPIP275_3095 NZ_AAOS02000020.1 Protein Homology CDS 19602 20492 . - 0 ID=cds-WP_002211481.1;Parent=gene-YPIP275_RS17600;Dbxref=GenBank:WP_002211481.1;Name=WP_002211481.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211481.1;locus_tag=YPIP275_RS17600;product=EamA family transporter RarD;protein_id=WP_002211481.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 20579 21049 . - . ID=gene-YPIP275_RS17605;Name=YPIP275_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17605;old_locus_tag=YPIP275_3096 NZ_AAOS02000020.1 Protein Homology CDS 20579 21049 . - 0 ID=cds-WP_002211482.1;Parent=gene-YPIP275_RS17605;Dbxref=GenBank:WP_002211482.1;Name=WP_002211482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211482.1;locus_tag=YPIP275_RS17605;product=thioesterase family protein;protein_id=WP_002211482.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 21271 22149 . + . ID=gene-YPIP275_RS17610;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=YPIP275_RS17610;old_locus_tag=YPIP275_3097 NZ_AAOS02000020.1 Protein Homology CDS 21271 22149 . + 0 ID=cds-WP_002211483.1;Parent=gene-YPIP275_RS17610;Dbxref=GenBank:WP_002211483.1;Name=WP_002211483.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=glycerophospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229073.1;locus_tag=YPIP275_RS17610;product=phospholipase A;protein_id=WP_002211483.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 22227 24059 . + . ID=gene-YPIP275_RS17615;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS17615;old_locus_tag=YPIP275_3098 NZ_AAOS02000020.1 Protein Homology CDS 22227 24059 . + 0 ID=cds-WP_002211484.1;Parent=gene-YPIP275_RS17615;Dbxref=GenBank:WP_002211484.1;Name=WP_002211484.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080187.1;locus_tag=YPIP275_RS17615;product=ATP-dependent DNA helicase RecQ;protein_id=WP_002211484.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 24166 24786 . + . ID=gene-YPIP275_RS17620;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=YPIP275_RS17620;old_locus_tag=YPIP275_3099 NZ_AAOS02000020.1 Protein Homology CDS 24166 24786 . + 0 ID=cds-WP_002211485.1;Parent=gene-YPIP275_RS17620;Dbxref=GenBank:WP_002211485.1;Name=WP_002211485.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004714274.1;locus_tag=YPIP275_RS17620;product=threonine export protein RhtC;protein_id=WP_002211485.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 24837 25457 . - . ID=gene-YPIP275_RS17625;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=YPIP275_RS17625;old_locus_tag=YPIP275_3100 NZ_AAOS02000020.1 Protein Homology CDS 24837 25457 . - 0 ID=cds-WP_002211486.1;Parent=gene-YPIP275_RS17625;Dbxref=GenBank:WP_002211486.1;Name=WP_002211486.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080185.1;locus_tag=YPIP275_RS17625;product=homoserine/homoserine lactone efflux protein;protein_id=WP_002211486.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 25653 26666 . + . ID=gene-YPIP275_RS17630;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=YPIP275_RS17630;old_locus_tag=YPIP275_3101 NZ_AAOS02000020.1 Protein Homology CDS 25653 26666 . + 0 ID=cds-WP_002211487.1;Parent=gene-YPIP275_RS17630;Dbxref=GenBank:WP_002211487.1;Name=WP_002211487.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211487.1;locus_tag=YPIP275_RS17630;product=lysophospholipase L2;protein_id=WP_002211487.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 26701 27510 . + . ID=gene-YPIP275_RS17635;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=YPIP275_RS17635;old_locus_tag=YPIP275_3102 NZ_AAOS02000020.1 Protein Homology CDS 26701 27510 . + 0 ID=cds-WP_002211488.1;Parent=gene-YPIP275_RS17635;Dbxref=GenBank:WP_002211488.1;Name=WP_002211488.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104312.1;locus_tag=YPIP275_RS17635;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_002211488.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 27787 28986 . + . ID=gene-YPIP275_RS17640;Name=YPIP275_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17640;old_locus_tag=YPIP275_3104 NZ_AAOS02000020.1 Protein Homology CDS 27787 28986 . + 0 ID=cds-WP_002366764.1;Parent=gene-YPIP275_RS17640;Dbxref=GenBank:WP_002366764.1;Name=WP_002366764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304727.1;locus_tag=YPIP275_RS17640;product=putative mucin/carbohydrate-binding domain-containing protein;protein_id=WP_002366764.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 29060 30175 . - . ID=gene-YPIP275_RS17645;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS17645;old_locus_tag=YPIP275_3105 NZ_AAOS02000020.1 Protein Homology CDS 29060 30175 . - 0 ID=cds-WP_002211490.1;Parent=gene-YPIP275_RS17645;Dbxref=GenBank:WP_002211490.1;Name=WP_002211490.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674700.1;locus_tag=YPIP275_RS17645;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211490.1;transl_table=11 NZ_AAOS02000020.1 RefSeq pseudogene 30287 30367 . - . ID=gene-YPIP275_RS28885;Name=YPIP275_RS28885;end_range=30367,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28885;partial=true;pseudo=true;start_range=.,30287 NZ_AAOS02000020.1 Protein Homology CDS 30287 30367 . - 0 ID=cds-YPIP275_RS28885;Parent=gene-YPIP275_RS28885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=30367,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311152.1;locus_tag=YPIP275_RS28885;partial=true;product=hypothetical protein;pseudo=true;start_range=.,30287;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 30528 30626 . + . ID=gene-YPIP275_RS17650;Name=YPIP275_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17650 NZ_AAOS02000020.1 Protein Homology CDS 30528 30626 . + 0 ID=cds-WP_002216569.1;Parent=gene-YPIP275_RS17650;Dbxref=GenBank:WP_002216569.1;Name=WP_002216569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216569.1;locus_tag=YPIP275_RS17650;product=hypothetical protein;protein_id=WP_002216569.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 30800 32455 . + . ID=gene-YPIP275_RS17655;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS17655;old_locus_tag=YPIP275_3106 NZ_AAOS02000020.1 Protein Homology CDS 30800 32455 . + 0 ID=cds-WP_002211491.1;Parent=gene-YPIP275_RS17655;Dbxref=GenBank:WP_002211491.1;Name=WP_002211491.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211491.1;locus_tag=YPIP275_RS17655;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_002211491.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 32445 33719 . + . ID=gene-YPIP275_RS17660;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=YPIP275_RS17660;old_locus_tag=YPIP275_3107 NZ_AAOS02000020.1 Protein Homology CDS 32445 33719 . + 0 ID=cds-WP_002211492.1;Parent=gene-YPIP275_RS17660;Dbxref=GenBank:WP_002211492.1;Name=WP_002211492.1;gbkey=CDS;gene=glpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211492.1;locus_tag=YPIP275_RS17660;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_002211492.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 33716 35011 . + . ID=gene-YPIP275_RS17665;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=YPIP275_RS17665;old_locus_tag=YPIP275_3108 NZ_AAOS02000020.1 Protein Homology CDS 33716 35011 . + 0 ID=cds-WP_002211493.1;Parent=gene-YPIP275_RS17665;Dbxref=GenBank:WP_002211493.1;Name=WP_002211493.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211493.1;locus_tag=YPIP275_RS17665;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_002211493.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 35173 35700 . - . ID=gene-YPIP275_RS17670;Name=YPIP275_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17670;old_locus_tag=YPIP275_3109 NZ_AAOS02000020.1 Protein Homology CDS 35173 35700 . - 0 ID=cds-WP_002211494.1;Parent=gene-YPIP275_RS17670;Dbxref=GenBank:WP_002211494.1;Name=WP_002211494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211494.1;locus_tag=YPIP275_RS17670;product=DcrB family lipoprotein;protein_id=WP_002211494.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 35830 36498 . - . ID=gene-YPIP275_RS17675;Name=YPIP275_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17675;old_locus_tag=YPIP275_3110 NZ_AAOS02000020.1 Protein Homology CDS 35830 36498 . - 0 ID=cds-WP_002211495.1;Parent=gene-YPIP275_RS17675;Dbxref=GenBank:WP_002211495.1;Name=WP_002211495.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191518.1;locus_tag=YPIP275_RS17675;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_002211495.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 36782 37036 . + . ID=gene-YPIP275_RS17680;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=YPIP275_RS17680 NZ_AAOS02000020.1 Protein Homology CDS 36782 37036 . + 0 ID=cds-WP_002215973.1;Parent=gene-YPIP275_RS17680;Dbxref=GenBank:WP_002215973.1;Name=WP_002215973.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215973.1;locus_tag=YPIP275_RS17680;product=sulfurtransferase TusA;protein_id=WP_002215973.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 37120 39486 . - . ID=gene-YPIP275_RS17685;Name=YPIP275_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17685;old_locus_tag=YPIP275_3112 NZ_AAOS02000020.1 Protein Homology CDS 37120 39486 . - 0 ID=cds-WP_002211497.1;Parent=gene-YPIP275_RS17685;Dbxref=GenBank:WP_002211497.1;Name=WP_002211497.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231925.1;locus_tag=YPIP275_RS17685;product=zinc/cadmium/mercury/lead-transporting ATPase;protein_id=WP_002211497.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 39900 40526 . - . ID=gene-YPIP275_RS17690;Name=YPIP275_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17690;old_locus_tag=YPIP275_3113 NZ_AAOS02000020.1 Protein Homology CDS 39900 40526 . - 0 ID=cds-WP_002211498.1;Parent=gene-YPIP275_RS17690;Dbxref=GenBank:WP_002211498.1;Name=WP_002211498.1;Ontology_term=GO:0006629,GO:0016787,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211498.1;locus_tag=YPIP275_RS17690;product=lysoplasmalogenase;protein_id=WP_002211498.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 40816 41136 . + . ID=gene-YPIP275_RS17695;Name=YPIP275_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17695;old_locus_tag=YPIP275_3114 NZ_AAOS02000020.1 Protein Homology CDS 40816 41136 . + 0 ID=cds-WP_002211499.1;Parent=gene-YPIP275_RS17695;Dbxref=GenBank:WP_002211499.1;Name=WP_002211499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163956.1;locus_tag=YPIP275_RS17695;product=DUF1820 family protein;protein_id=WP_002211499.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 41348 41767 . + . ID=gene-YPIP275_RS17700;Name=YPIP275_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17700;old_locus_tag=YPIP275_3115 NZ_AAOS02000020.1 Protein Homology CDS 41348 41767 . + 0 ID=cds-WP_002211500.1;Parent=gene-YPIP275_RS17700;Dbxref=GenBank:WP_002211500.1;Name=WP_002211500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211500.1;locus_tag=YPIP275_RS17700;product=DUF2500 domain-containing protein;protein_id=WP_002211500.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 41954 42226 . - . ID=gene-YPIP275_RS17705;Name=YPIP275_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17705;old_locus_tag=YPIP275_3116 NZ_AAOS02000020.1 Protein Homology CDS 41954 42226 . - 0 ID=cds-WP_002211501.1;Parent=gene-YPIP275_RS17705;Dbxref=GenBank:WP_002211501.1;Name=WP_002211501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163952.1;locus_tag=YPIP275_RS17705;product=DUF1145 family protein;protein_id=WP_002211501.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 42216 42878 . - . ID=gene-YPIP275_RS17710;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=YPIP275_RS17710;old_locus_tag=YPIP275_3117 NZ_AAOS02000020.1 Protein Homology CDS 42216 42878 . - 0 ID=cds-WP_002211502.1;Parent=gene-YPIP275_RS17710;Dbxref=GenBank:WP_002211502.1;Name=WP_002211502.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229076.1;locus_tag=YPIP275_RS17710;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_002211502.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 43160 44776 . + . ID=gene-YPIP275_RS17720;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=YPIP275_RS17720;old_locus_tag=YPIP275_3118 NZ_AAOS02000020.1 Protein Homology CDS 43160 44776 . + 0 ID=cds-WP_002211503.1;Parent=gene-YPIP275_RS17720;Dbxref=GenBank:WP_002211503.1;Name=WP_002211503.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002371117.1;locus_tag=YPIP275_RS17720;product=signal recognition particle-docking protein FtsY;protein_id=WP_002211503.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 44782 45450 . + . ID=gene-YPIP275_RS17725;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=YPIP275_RS17725;old_locus_tag=YPIP275_3119 NZ_AAOS02000020.1 Protein Homology CDS 44782 45450 . + 0 ID=cds-WP_002211504.1;Parent=gene-YPIP275_RS17725;Dbxref=GenBank:WP_002211504.1;Name=WP_002211504.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080173.1;locus_tag=YPIP275_RS17725;product=cell division ATP-binding protein FtsE;protein_id=WP_002211504.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 45440 46393 . + . ID=gene-YPIP275_RS17730;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=YPIP275_RS17730;old_locus_tag=YPIP275_3120 NZ_AAOS02000020.1 Protein Homology CDS 45440 46393 . + 0 ID=cds-WP_002211505.1;Parent=gene-YPIP275_RS17730;Dbxref=GenBank:WP_002211505.1;Name=WP_002211505.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211505.1;locus_tag=YPIP275_RS17730;product=permease-like cell division protein FtsX;protein_id=WP_002211505.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 46704 47561 . + . ID=gene-YPIP275_RS17735;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=YPIP275_RS17735;old_locus_tag=YPIP275_3121 NZ_AAOS02000020.1 Protein Homology CDS 46704 47561 . + 0 ID=cds-WP_002211506.1;Parent=gene-YPIP275_RS17735;Dbxref=GenBank:WP_002211506.1;Name=WP_002211506.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458573.1;locus_tag=YPIP275_RS17735;product=RNA polymerase sigma factor RpoH;protein_id=WP_002211506.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 47775 48233 . + . ID=gene-YPIP275_RS17745;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS17745;old_locus_tag=YPIP275_3122 NZ_AAOS02000020.1 Protein Homology CDS 47775 48233 . + 0 ID=cds-WP_002213775.1-15;Parent=gene-YPIP275_RS17745;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS17745;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 48479 48871 . - . ID=gene-YPIP275_RS17750;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=YPIP275_RS17750;old_locus_tag=YPIP275_3123 NZ_AAOS02000020.1 Protein Homology CDS 48479 48871 . - 0 ID=cds-WP_002211507.1;Parent=gene-YPIP275_RS17750;Dbxref=GenBank:WP_002211507.1;Name=WP_002211507.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211507.1;locus_tag=YPIP275_RS17750;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_002211507.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 49293 50408 . + . ID=gene-YPIP275_RS17755;Name=YPIP275_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17755;old_locus_tag=YPIP275_3124 NZ_AAOS02000020.1 Protein Homology CDS 49293 50408 . + 0 ID=cds-WP_002211508.1;Parent=gene-YPIP275_RS17755;Dbxref=GenBank:WP_002211508.1;Name=WP_002211508.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191523.1;locus_tag=YPIP275_RS17755;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_002211508.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 50589 51515 . + . ID=gene-YPIP275_RS17760;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=YPIP275_RS17760;old_locus_tag=YPIP275_3125 NZ_AAOS02000020.1 Protein Homology CDS 50589 51515 . + 0 ID=cds-WP_002211509.1;Parent=gene-YPIP275_RS17760;Dbxref=GenBank:WP_002211509.1;Name=WP_002211509.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=YPIP275_RS17760;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_002211509.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 51512 52798 . + . ID=gene-YPIP275_RS17765;Name=YPIP275_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17765;old_locus_tag=YPIP275_3126 NZ_AAOS02000020.1 Protein Homology CDS 51512 52798 . + 0 ID=cds-WP_002211510.1;Parent=gene-YPIP275_RS17765;Dbxref=GenBank:WP_002211510.1;Name=WP_002211510.1;Ontology_term=GO:0015658,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104327.1;locus_tag=YPIP275_RS17765;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=WP_002211510.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 52795 53562 . + . ID=gene-YPIP275_RS17770;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=YPIP275_RS17770;old_locus_tag=YPIP275_3127 NZ_AAOS02000020.1 Protein Homology CDS 52795 53562 . + 0 ID=cds-WP_002211511.1;Parent=gene-YPIP275_RS17770;Dbxref=GenBank:WP_002211511.1;Name=WP_002211511.1;Ontology_term=GO:0005524;gbkey=CDS;gene=livG;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191524.1;locus_tag=YPIP275_RS17770;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_002211511.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 53607 54308 . + . ID=gene-YPIP275_RS17775;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=YPIP275_RS17775;old_locus_tag=YPIP275_3128 NZ_AAOS02000020.1 Protein Homology CDS 53607 54308 . + 0 ID=cds-WP_002211512.1;Parent=gene-YPIP275_RS17775;Dbxref=GenBank:WP_002211512.1;Name=WP_002211512.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957566.1;locus_tag=YPIP275_RS17775;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_002211512.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 54536 54997 . + . ID=gene-YPIP275_RS17780;Name=YPIP275_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17780;old_locus_tag=YPIP275_3129 NZ_AAOS02000020.1 Protein Homology CDS 54536 54997 . + 0 ID=cds-WP_002211513.1;Parent=gene-YPIP275_RS17780;Dbxref=GenBank:WP_002211513.1;Name=WP_002211513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211513.1;locus_tag=YPIP275_RS17780;product=hypothetical protein;protein_id=WP_002211513.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 55112 56218 . - . ID=gene-YPIP275_RS17785;Name=YPIP275_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17785;old_locus_tag=YPIP275_3130 NZ_AAOS02000020.1 Protein Homology CDS 55112 56218 . - 0 ID=cds-WP_002211514.1;Parent=gene-YPIP275_RS17785;Dbxref=GenBank:WP_002211514.1;Name=WP_002211514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211514.1;locus_tag=YPIP275_RS17785;product=hypothetical protein;protein_id=WP_002211514.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 56380 56898 . - . ID=gene-YPIP275_RS17790;Name=YPIP275_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17790;old_locus_tag=YPIP275_3131 NZ_AAOS02000020.1 Protein Homology CDS 56380 56898 . - 0 ID=cds-WP_002211515.1;Parent=gene-YPIP275_RS17790;Dbxref=GenBank:WP_002211515.1;Name=WP_002211515.1;Ontology_term=GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191527.1;locus_tag=YPIP275_RS17790;product=CS1 type fimbrial major subunit;protein_id=WP_002211515.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 56960 57607 . - . ID=gene-YPIP275_RS17795;Name=YPIP275_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17795;old_locus_tag=YPIP275_3132 NZ_AAOS02000020.1 Protein Homology CDS 56960 57607 . - 0 ID=cds-WP_002211516.1;Parent=gene-YPIP275_RS17795;Dbxref=GenBank:WP_002211516.1;Name=WP_002211516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304719.1;locus_tag=YPIP275_RS17795;product=hypothetical protein;protein_id=WP_002211516.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 57579 58265 . - . ID=gene-YPIP275_RS17800;Name=YPIP275_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17800;old_locus_tag=YPIP275_3133 NZ_AAOS02000020.1 Protein Homology CDS 57579 58265 . - 0 ID=cds-WP_002211517.1;Parent=gene-YPIP275_RS17800;Dbxref=GenBank:WP_002211517.1;Name=WP_002211517.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304718.1;locus_tag=YPIP275_RS17800;product=fimbrial biogenesis chaperone;protein_id=WP_002211517.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 58283 60616 . - . ID=gene-YPIP275_RS17805;Name=YPIP275_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17805;old_locus_tag=YPIP275_3134 NZ_AAOS02000020.1 Protein Homology CDS 58283 60616 . - 0 ID=cds-WP_002211518.1;Parent=gene-YPIP275_RS17805;Dbxref=GenBank:WP_002211518.1;Name=WP_002211518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191530.1;locus_tag=YPIP275_RS17805;product=TcfC E-set like domain-containing protein;protein_id=WP_002211518.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 60883 61374 . - . ID=gene-YPIP275_RS17810;Name=YPIP275_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17810;old_locus_tag=YPIP275_3135 NZ_AAOS02000020.1 Protein Homology CDS 60883 61374 . - 0 ID=cds-WP_002228181.1;Parent=gene-YPIP275_RS17810;Dbxref=GenBank:WP_002228181.1;Name=WP_002228181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228181.1;locus_tag=YPIP275_RS17810;product=fimbrial protein;protein_id=WP_002228181.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 61929 63248 . + . ID=gene-YPIP275_RS17815;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=YPIP275_RS17815;old_locus_tag=YPIP275_3136 NZ_AAOS02000020.1 Protein Homology CDS 61929 63248 . + 0 ID=cds-WP_002211520.1;Parent=gene-YPIP275_RS17815;Dbxref=GenBank:WP_002211520.1;Name=WP_002211520.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710220.1;locus_tag=YPIP275_RS17815;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_002211520.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 63546 64433 . + . ID=gene-YPIP275_RS17820;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS17820;old_locus_tag=YPIP275_3137 NZ_AAOS02000020.1 Protein Homology CDS 63546 64433 . + 0 ID=cds-WP_002211521.1;Parent=gene-YPIP275_RS17820;Dbxref=GenBank:WP_002211521.1;Name=WP_002211521.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703935.1;locus_tag=YPIP275_RS17820;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_002211521.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 64430 65275 . + . ID=gene-YPIP275_RS17825;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=YPIP275_RS17825;old_locus_tag=YPIP275_3138 NZ_AAOS02000020.1 Protein Homology CDS 64430 65275 . + 0 ID=cds-WP_002211522.1;Parent=gene-YPIP275_RS17825;Dbxref=GenBank:WP_002211522.1;Name=WP_002211522.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211522.1;locus_tag=YPIP275_RS17825;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_002211522.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 65282 66355 . + . ID=gene-YPIP275_RS17830;Name=YPIP275_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17830;old_locus_tag=YPIP275_3139 NZ_AAOS02000020.1 Protein Homology CDS 65282 66355 . + 0 ID=cds-WP_002211523.1;Parent=gene-YPIP275_RS17830;Dbxref=GenBank:WP_002211523.1;Name=WP_002211523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211523.1;locus_tag=YPIP275_RS17830;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_002211523.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 66352 67101 . + . ID=gene-YPIP275_RS17835;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS17835;old_locus_tag=YPIP275_3140 NZ_AAOS02000020.1 Protein Homology CDS 66352 67101 . + 0 ID=cds-WP_002211524.1;Parent=gene-YPIP275_RS17835;Dbxref=GenBank:WP_002211524.1;Name=WP_002211524.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211524.1;locus_tag=YPIP275_RS17835;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211524.1;transl_table=11 NZ_AAOS02000020.1 RefSeq pseudogene 67202 68157 . + . ID=gene-YPIP275_RS17840;Name=YPIP275_RS17840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS17840;old_locus_tag=YPIP275_3141;pseudo=true NZ_AAOS02000020.1 Protein Homology CDS 67202 68157 . + 0 ID=cds-YPIP275_RS17840;Parent=gene-YPIP275_RS17840;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811094.1;locus_tag=YPIP275_RS17840;product=AEC family transporter;pseudo=true;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 68510 69409 . + . ID=gene-YPIP275_RS17845;Name=YPIP275_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17845 NZ_AAOS02000020.1 Protein Homology CDS 68510 69409 . + 0 ID=cds-WP_002215597.1;Parent=gene-YPIP275_RS17845;Dbxref=GenBank:WP_002215597.1;Name=WP_002215597.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215597.1;locus_tag=YPIP275_RS17845;product=carboxylate/amino acid/amine transporter;protein_id=WP_002215597.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 69297 70250 . - . ID=gene-YPIP275_RS17850;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=YPIP275_RS17850;old_locus_tag=YPIP275_3142 NZ_AAOS02000020.1 Protein Homology CDS 69297 70250 . - 0 ID=cds-WP_002211525.1;Parent=gene-YPIP275_RS17850;Dbxref=GenBank:WP_002211525.1;Name=WP_002211525.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191537.1;locus_tag=YPIP275_RS17850;product=HTH-type transcriptional regulator MetR;protein_id=WP_002211525.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 70356 72632 . + . ID=gene-YPIP275_RS17855;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=YPIP275_RS17855;old_locus_tag=YPIP275_3143 NZ_AAOS02000020.1 Protein Homology CDS 70356 72632 . + 0 ID=cds-WP_002211526.1;Parent=gene-YPIP275_RS17855;Dbxref=GenBank:WP_002211526.1;Name=WP_002211526.1;Ontology_term=GO:0008652,GO:0071265,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211526.1;locus_tag=YPIP275_RS17855;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_002211526.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 72687 73559 . - . ID=gene-YPIP275_RS17860;Name=YPIP275_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17860;old_locus_tag=YPIP275_3144 NZ_AAOS02000020.1 Protein Homology CDS 72687 73559 . - 0 ID=cds-WP_002211527.1;Parent=gene-YPIP275_RS17860;Dbxref=GenBank:WP_002211527.1;Name=WP_002211527.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413425.1;locus_tag=YPIP275_RS17860;product=dienelactone hydrolase family protein;protein_id=WP_002211527.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 73987 74748 . + . ID=gene-YPIP275_RS17865;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=YPIP275_RS17865;old_locus_tag=YPIP275_3145 NZ_AAOS02000020.1 Protein Homology CDS 73987 74748 . + 0 ID=cds-WP_002211528.1;Parent=gene-YPIP275_RS17865;Dbxref=GenBank:WP_002211528.1;Name=WP_002211528.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224472.1;locus_tag=YPIP275_RS17865;product=uridine phosphorylase;protein_id=WP_002211528.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 74869 75699 . + . ID=gene-YPIP275_RS17870;Name=YPIP275_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17870;old_locus_tag=YPIP275_3146 NZ_AAOS02000020.1 Protein Homology CDS 74869 75699 . + 0 ID=cds-WP_002228183.1;Parent=gene-YPIP275_RS17870;Dbxref=GenBank:WP_002228183.1;Name=WP_002228183.1;Ontology_term=GO:0004721,GO:0004725;gbkey=CDS;go_function=phosphoprotein phosphatase activity|0004721||IEA,protein tyrosine phosphatase activity|0004725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228183.1;locus_tag=YPIP275_RS17870;product=tyrosine-protein phosphatase;protein_id=WP_002228183.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 76063 77874 . + . ID=gene-YPIP275_RS17875;Name=YPIP275_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17875;old_locus_tag=YPIP275_3147 NZ_AAOS02000020.1 Protein Homology CDS 76063 77874 . + 0 ID=cds-WP_002211530.1;Parent=gene-YPIP275_RS17875;Dbxref=GenBank:WP_002211530.1;Name=WP_002211530.1;Ontology_term=GO:0015833,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104342.1;locus_tag=YPIP275_RS17875;product=carbon starvation CstA family protein;protein_id=WP_002211530.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 78146 78676 . + . ID=gene-YPIP275_RS17880;Name=YPIP275_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17880;old_locus_tag=YPIP275_3148 NZ_AAOS02000020.1 Protein Homology CDS 78146 78676 . + 0 ID=cds-WP_002211531.1;Parent=gene-YPIP275_RS17880;Dbxref=GenBank:WP_002211531.1;Name=WP_002211531.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191541.1;locus_tag=YPIP275_RS17880;product=DedA family protein;protein_id=WP_002211531.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 78884 80389 . + . ID=gene-YPIP275_RS17885;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=YPIP275_RS17885;old_locus_tag=YPIP275_3149 NZ_AAOS02000020.1 Protein Homology CDS 78884 80389 . + 0 ID=cds-WP_002211532.1;Parent=gene-YPIP275_RS17885;Dbxref=GenBank:WP_002211532.1;Name=WP_002211532.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104343.1;locus_tag=YPIP275_RS17885;product=DNA recombination protein RmuC;protein_id=WP_002211532.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 80481 81236 . + . ID=gene-YPIP275_RS17890;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=YPIP275_RS17890;old_locus_tag=YPIP275_3150 NZ_AAOS02000020.1 Protein Homology CDS 80481 81236 . + 0 ID=cds-WP_002211533.1;Parent=gene-YPIP275_RS17890;Dbxref=GenBank:WP_002211533.1;Name=WP_002211533.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080147.1;locus_tag=YPIP275_RS17890;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_002211533.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 81250 81900 . + . ID=gene-YPIP275_RS17895;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS17895;old_locus_tag=YPIP275_3151 NZ_AAOS02000020.1 Protein Homology CDS 81250 81900 . + 0 ID=cds-WP_002215928.1;Parent=gene-YPIP275_RS17895;Dbxref=GenBank:WP_002215928.1;Name=WP_002215928.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215928.1;locus_tag=YPIP275_RS17895;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_002215928.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 81900 83531 . + . ID=gene-YPIP275_RS17900;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=YPIP275_RS17900;old_locus_tag=YPIP275_3152 NZ_AAOS02000020.1 Protein Homology CDS 81900 83531 . + 0 ID=cds-WP_002211535.1;Parent=gene-YPIP275_RS17900;Dbxref=GenBank:WP_002211535.1;Name=WP_002211535.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211535.1;locus_tag=YPIP275_RS17900;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_002211535.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 83711 83977 . + . ID=gene-YPIP275_RS17905;Name=YPIP275_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17905;old_locus_tag=YPIP275_3153 NZ_AAOS02000020.1 Protein Homology CDS 83711 83977 . + 0 ID=cds-WP_002211536.1;Parent=gene-YPIP275_RS17905;Dbxref=GenBank:WP_002211536.1;Name=WP_002211536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211536.1;locus_tag=YPIP275_RS17905;product=Sec-independent protein translocase subunit TatA;protein_id=WP_002211536.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 83981 84643 . + . ID=gene-YPIP275_RS17910;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=YPIP275_RS17910;old_locus_tag=YPIP275_3154 NZ_AAOS02000020.1 Protein Homology CDS 83981 84643 . + 0 ID=cds-WP_002211537.1;Parent=gene-YPIP275_RS17910;Dbxref=GenBank:WP_002211537.1;Name=WP_002211537.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=transmembrane protein transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875878.1;locus_tag=YPIP275_RS17910;product=Sec-independent protein translocase protein TatB;protein_id=WP_002211537.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 84646 85422 . + . ID=gene-YPIP275_RS17915;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=YPIP275_RS17915;old_locus_tag=YPIP275_3155 NZ_AAOS02000020.1 Protein Homology CDS 84646 85422 . + 0 ID=cds-WP_002211538.1;Parent=gene-YPIP275_RS17915;Dbxref=GenBank:WP_002211538.1;Name=WP_002211538.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211538.1;locus_tag=YPIP275_RS17915;product=Sec-independent protein translocase subunit TatC;protein_id=WP_002211538.1;transl_table=11 NZ_AAOS02000020.1 RefSeq pseudogene 85478 85972 . + . ID=gene-YPIP275_RS17920;Name=YPIP275_RS17920;end_range=85972,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS17920;old_locus_tag=YPIP275_3156;partial=true;pseudo=true NZ_AAOS02000020.1 Protein Homology CDS 85478 85972 . + 0 ID=cds-YPIP275_RS17920;Parent=gene-YPIP275_RS17920;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016788;end_range=85972,.;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005187843.1;locus_tag=YPIP275_RS17920;partial=true;product=TatD family hydrolase;pseudo=true;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 86044 87066 . + . ID=gene-YPIP275_RS17925;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS17925;old_locus_tag=YPIP275_3157 NZ_AAOS02000020.1 Protein Homology CDS 86044 87066 . + 0 ID=cds-WP_000255944.1-13;Parent=gene-YPIP275_RS17925;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS17925;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 87063 87845 . + . ID=gene-YPIP275_RS17930;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS17930;old_locus_tag=YPIP275_3158 NZ_AAOS02000020.1 Protein Homology CDS 87063 87845 . + 0 ID=cds-WP_001317493.1-17;Parent=gene-YPIP275_RS17930;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS17930;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000020.1 RefSeq pseudogene 87911 88219 . + . ID=gene-YPIP275_RS17935;Name=YPIP275_RS17935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS17935;old_locus_tag=YPIP275_3159;partial=true;pseudo=true;start_range=.,87911 NZ_AAOS02000020.1 Protein Homology CDS 87911 88219 . + 0 ID=cds-YPIP275_RS17935;Parent=gene-YPIP275_RS17935;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005187843.1;locus_tag=YPIP275_RS17935;partial=true;product=TatD family hydrolase;pseudo=true;start_range=.,87911;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 88234 89256 . + . ID=gene-YPIP275_RS17940;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=YPIP275_RS17940;old_locus_tag=YPIP275_3160 NZ_AAOS02000020.1 Protein Homology CDS 88234 89256 . + 0 ID=cds-WP_002211541.1;Parent=gene-YPIP275_RS17940;Dbxref=GenBank:WP_002211541.1;Name=WP_002211541.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649068.1;locus_tag=YPIP275_RS17940;product=porphobilinogen synthase;protein_id=WP_002211541.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 89366 89854 . - . ID=gene-YPIP275_RS17945;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=YPIP275_RS17945;old_locus_tag=YPIP275_3161 NZ_AAOS02000020.1 Protein Homology CDS 89366 89854 . - 0 ID=cds-WP_002211542.1;Parent=gene-YPIP275_RS17945;Dbxref=GenBank:WP_002211542.1;Name=WP_002211542.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211542.1;locus_tag=YPIP275_RS17945;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_002211542.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 90102 91598 . + . ID=gene-YPIP275_RS17950;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=YPIP275_RS17950;old_locus_tag=YPIP275_3162 NZ_AAOS02000020.1 Protein Homology CDS 90102 91598 . + 0 ID=cds-WP_002215917.1;Parent=gene-YPIP275_RS17950;Dbxref=GenBank:WP_002215917.1;Name=WP_002215917.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165587.1;locus_tag=YPIP275_RS17950;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_002215917.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 91653 92354 . + . ID=gene-YPIP275_RS17955;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=YPIP275_RS17955;old_locus_tag=YPIP275_3163 NZ_AAOS02000020.1 Protein Homology CDS 91653 92354 . + 0 ID=cds-WP_002215918.1;Parent=gene-YPIP275_RS17955;Dbxref=GenBank:WP_002215918.1;Name=WP_002215918.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224484.1;locus_tag=YPIP275_RS17955;product=NAD(P)H-flavin reductase;protein_id=WP_002215918.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 92514 93677 . - . ID=gene-YPIP275_RS17960;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=YPIP275_RS17960;old_locus_tag=YPIP275_3164 NZ_AAOS02000020.1 Protein Homology CDS 92514 93677 . - 0 ID=cds-WP_002211545.1;Parent=gene-YPIP275_RS17960;Dbxref=GenBank:WP_002211545.1;Name=WP_002211545.1;Ontology_term=GO:0006631,GO:0003988;gbkey=CDS;gene=fadA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012440011.1;locus_tag=YPIP275_RS17960;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_002211545.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 93689 95878 . - . ID=gene-YPIP275_RS17965;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=YPIP275_RS17965;old_locus_tag=YPIP275_3165 NZ_AAOS02000020.1 Protein Homology CDS 93689 95878 . - 0 ID=cds-WP_002211546.1;Parent=gene-YPIP275_RS17965;Dbxref=GenBank:WP_002211546.1;Name=WP_002211546.1;Ontology_term=GO:0006631,GO:0016491,GO:0070403;gbkey=CDS;gene=fadB;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005274741.1;locus_tag=YPIP275_RS17965;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_002211546.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 96205 97536 . + . ID=gene-YPIP275_RS17970;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS17970;old_locus_tag=YPIP275_3166 NZ_AAOS02000020.1 Protein Homology CDS 96205 97536 . + 0 ID=cds-WP_002211547.1;Parent=gene-YPIP275_RS17970;Dbxref=GenBank:WP_002211547.1;Name=WP_002211547.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211547.1;locus_tag=YPIP275_RS17970;product=Xaa-Pro dipeptidase;protein_id=WP_002211547.1;transl_table=11 NZ_AAOS02000020.1 RefSeq pseudogene 97536 97706 . + . ID=gene-YPIP275_RS17975;Name=YPIP275_RS17975;end_range=97706,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS17975;old_locus_tag=YPIP275_3167;partial=true;pseudo=true NZ_AAOS02000020.1 Protein Homology CDS 97536 97706 . + 0 ID=cds-YPIP275_RS17975;Parent=gene-YPIP275_RS17975;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=97706,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649073.1;locus_tag=YPIP275_RS17975;partial=true;product=YigZ family protein;pseudo=true;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 97850 98308 . + . ID=gene-YPIP275_RS17980;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS17980;old_locus_tag=YPIP275_3168 NZ_AAOS02000020.1 Protein Homology CDS 97850 98308 . + 0 ID=cds-WP_002213759.1-8;Parent=gene-YPIP275_RS17980;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS17980;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000020.1 RefSeq pseudogene 98411 98857 . + . ID=gene-YPIP275_RS17985;Name=YPIP275_RS17985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS17985;old_locus_tag=YPIP275_3169;partial=true;pseudo=true;start_range=.,98411 NZ_AAOS02000020.1 Protein Homology CDS 98411 98857 . + 0 ID=cds-YPIP275_RS17985;Parent=gene-YPIP275_RS17985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649073.1;locus_tag=YPIP275_RS17985;partial=true;product=YigZ family protein;pseudo=true;start_range=.,98411;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 98897 100348 . + . ID=gene-YPIP275_RS17990;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=YPIP275_RS17990;old_locus_tag=YPIP275_3170 NZ_AAOS02000020.1 Protein Homology CDS 98897 100348 . + 0 ID=cds-WP_002211550.1;Parent=gene-YPIP275_RS17990;Dbxref=GenBank:WP_002211550.1;Name=WP_002211550.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224489.1;locus_tag=YPIP275_RS17990;product=Trk system potassium transporter TrkH;protein_id=WP_002211550.1;transl_table=11 NZ_AAOS02000020.1 RefSeq gene 100370 100903 . + . ID=gene-YPIP275_RS17995;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=YPIP275_RS17995;old_locus_tag=YPIP275_3171 NZ_AAOS02000020.1 Protein Homology CDS 100370 100903 . + 0 ID=cds-WP_002215920.1;Parent=gene-YPIP275_RS17995;Dbxref=GenBank:WP_002215920.1;Name=WP_002215920.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215920.1;locus_tag=YPIP275_RS17995;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_002215920.1;transl_table=11 ##sequence-region NZ_AAOS02000019.1 1 115833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000019.1 RefSeq region 1 115833 . + . ID=NZ_AAOS02000019.1:1..115833;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000019.1 RefSeq gene 228 755 . + . ID=gene-YPIP275_RS17005;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=YPIP275_RS17005;old_locus_tag=YPIP275_2253 NZ_AAOS02000019.1 Protein Homology CDS 228 755 . + 0 ID=cds-WP_002211381.1;Parent=gene-YPIP275_RS17005;Dbxref=GenBank:WP_002211381.1;Name=WP_002211381.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228602.1;locus_tag=YPIP275_RS17005;product=RNA pyrophosphohydrolase;protein_id=WP_002211381.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 768 3014 . + . ID=gene-YPIP275_RS17010;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=YPIP275_RS17010;old_locus_tag=YPIP275_2254 NZ_AAOS02000019.1 Protein Homology CDS 768 3014 . + 0 ID=cds-WP_002228076.1;Parent=gene-YPIP275_RS17010;Dbxref=GenBank:WP_002228076.1;Name=WP_002228076.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078930.1;locus_tag=YPIP275_RS17010;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_002228076.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 3265 4137 . + . ID=gene-YPIP275_RS17015;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=YPIP275_RS17015;old_locus_tag=YPIP275_2255 NZ_AAOS02000019.1 Protein Homology CDS 3265 4137 . + 0 ID=cds-WP_002211383.1;Parent=gene-YPIP275_RS17015;Dbxref=GenBank:WP_002211383.1;Name=WP_002211383.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211383.1;locus_tag=YPIP275_RS17015;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_002211383.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 4144 4938 . + . ID=gene-YPIP275_RS17020;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=YPIP275_RS17020;old_locus_tag=YPIP275_2256 NZ_AAOS02000019.1 Protein Homology CDS 4144 4938 . + 0 ID=cds-WP_002211384.1;Parent=gene-YPIP275_RS17020;Dbxref=GenBank:WP_002211384.1;Name=WP_002211384.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=YPIP275_RS17020;product=thymidylate synthase;protein_id=WP_002211384.1;transl_table=11 NZ_AAOS02000019.1 RefSeq pseudogene 5174 5569 . + . ID=gene-YPIP275_RS17030;Name=YPIP275_RS17030;end_range=5569,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS17030;partial=true;pseudo=true NZ_AAOS02000019.1 Protein Homology CDS 5174 5569 . + 0 ID=cds-YPIP275_RS17030;Parent=gene-YPIP275_RS17030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5569,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228638.1;locus_tag=YPIP275_RS17030;partial=true;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;pseudo=true;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 5657 6679 . + . ID=gene-YPIP275_RS17035;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS17035;old_locus_tag=YPIP275_2258 NZ_AAOS02000019.1 Protein Homology CDS 5657 6679 . + 0 ID=cds-WP_000255944.1-14;Parent=gene-YPIP275_RS17035;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS17035;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 6676 7458 . + . ID=gene-YPIP275_RS17040;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS17040;old_locus_tag=YPIP275_2259 NZ_AAOS02000019.1 Protein Homology CDS 6676 7458 . + 0 ID=cds-WP_001317493.1-18;Parent=gene-YPIP275_RS17040;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS17040;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 7509 7640 . - . ID=gene-YPIP275_RS28860;Name=YPIP275_RS28860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28860;old_locus_tag=YPIP275_2260 NZ_AAOS02000019.1 Protein Homology CDS 7509 7640 . - 0 ID=cds-WP_002211386.1;Parent=gene-YPIP275_RS28860;Dbxref=GenBank:WP_002211386.1;Name=WP_002211386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211386.1;locus_tag=YPIP275_RS28860;product=hypothetical protein;protein_id=WP_002211386.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 7666 14124 . + . ID=gene-YPIP275_RS17045;Name=YPIP275_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17045;old_locus_tag=YPIP275_2261 NZ_AAOS02000019.1 Protein Homology CDS 7666 14124 . + 0 ID=cds-WP_002211387.1;Parent=gene-YPIP275_RS17045;Dbxref=GenBank:WP_002211387.1;Name=WP_002211387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016586335.1;locus_tag=YPIP275_RS17045;product=non-ribosomal peptide synthetase;protein_id=WP_002211387.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 14132 15820 . + . ID=gene-YPIP275_RS17050;Name=YPIP275_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17050;old_locus_tag=YPIP275_2262 NZ_AAOS02000019.1 Protein Homology CDS 14132 15820 . + 0 ID=cds-WP_002214915.1;Parent=gene-YPIP275_RS17050;Dbxref=GenBank:WP_002214915.1;Name=WP_002214915.1;Ontology_term=GO:0019184,GO:0044550,GO:0016874,GO:0031177;gbkey=CDS;go_function=ligase activity|0016874||IEA,phosphopantetheine binding|0031177||IEA;go_process=nonribosomal peptide biosynthetic process|0019184||IEA,secondary metabolite biosynthetic process|0044550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214915.1;locus_tag=YPIP275_RS17050;product=non-ribosomal peptide synthetase;protein_id=WP_002214915.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 15833 21652 . + . ID=gene-YPIP275_RS17055;Name=YPIP275_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17055;old_locus_tag=YPIP275_2263 NZ_AAOS02000019.1 Protein Homology CDS 15833 21652 . + 0 ID=cds-WP_002211388.1;Parent=gene-YPIP275_RS17055;Dbxref=GenBank:WP_002211388.1;Name=WP_002211388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002422307.1;locus_tag=YPIP275_RS17055;product=non-ribosomal peptide synthetase;protein_id=WP_002211388.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 21649 22725 . + . ID=gene-YPIP275_RS17060;Name=YPIP275_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17060;old_locus_tag=YPIP275_2264 NZ_AAOS02000019.1 Protein Homology CDS 21649 22725 . + 0 ID=cds-WP_002211389.1;Parent=gene-YPIP275_RS17060;Dbxref=GenBank:WP_002211389.1;Name=WP_002211389.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211389.1;locus_tag=YPIP275_RS17060;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_002211389.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 22722 23849 . + . ID=gene-YPIP275_RS17065;Name=YPIP275_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17065;old_locus_tag=YPIP275_2265 NZ_AAOS02000019.1 Protein Homology CDS 22722 23849 . + 0 ID=cds-WP_002211390.1;Parent=gene-YPIP275_RS17065;Dbxref=GenBank:WP_002211390.1;Name=WP_002211390.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104556.1;locus_tag=YPIP275_RS17065;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_002211390.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 23842 24606 . + . ID=gene-YPIP275_RS17070;Name=YPIP275_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17070;old_locus_tag=YPIP275_2266 NZ_AAOS02000019.1 Protein Homology CDS 23842 24606 . + 0 ID=cds-WP_002214925.1;Parent=gene-YPIP275_RS17070;Dbxref=GenBank:WP_002214925.1;Name=WP_002214925.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104557.1;locus_tag=YPIP275_RS17070;product=thioesterase II family protein;protein_id=WP_002214925.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 24596 25900 . + . ID=gene-YPIP275_RS17075;Name=YPIP275_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17075;old_locus_tag=YPIP275_2267 NZ_AAOS02000019.1 Protein Homology CDS 24596 25900 . + 0 ID=cds-WP_002211392.1;Parent=gene-YPIP275_RS17075;Dbxref=GenBank:WP_002211392.1;Name=WP_002211392.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104558.1;locus_tag=YPIP275_RS17075;product=MFS transporter;protein_id=WP_002211392.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 25900 27672 . + . ID=gene-YPIP275_RS17080;Name=YPIP275_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17080;old_locus_tag=YPIP275_2268 NZ_AAOS02000019.1 Protein Homology CDS 25900 27672 . + 0 ID=cds-WP_002214927.1;Parent=gene-YPIP275_RS17080;Dbxref=GenBank:WP_002214927.1;Name=WP_002214927.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193021.1;locus_tag=YPIP275_RS17080;product=ABC transporter ATP-binding protein;protein_id=WP_002214927.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 27665 29422 . + . ID=gene-YPIP275_RS17085;Name=YPIP275_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17085;old_locus_tag=YPIP275_2269 NZ_AAOS02000019.1 Protein Homology CDS 27665 29422 . + 0 ID=cds-WP_002211394.1;Parent=gene-YPIP275_RS17085;Dbxref=GenBank:WP_002211394.1;Name=WP_002211394.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303610.1;locus_tag=YPIP275_RS17085;product=ABC transporter ATP-binding protein;protein_id=WP_002211394.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 29745 30620 . - . ID=gene-YPIP275_RS17090;Name=YPIP275_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17090;old_locus_tag=YPIP275_2270 NZ_AAOS02000019.1 Protein Homology CDS 29745 30620 . - 0 ID=cds-WP_002211395.1;Parent=gene-YPIP275_RS17090;Dbxref=GenBank:WP_002211395.1;Name=WP_002211395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193019.1;locus_tag=YPIP275_RS17090;product=SinI family autotransporter-associated protein;protein_id=WP_002211395.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 31056 31454 . - . ID=gene-YPIP275_RS17095;Name=YPIP275_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17095;old_locus_tag=YPIP275_2271 NZ_AAOS02000019.1 Protein Homology CDS 31056 31454 . - 0 ID=cds-WP_002228079.1;Parent=gene-YPIP275_RS17095;Dbxref=GenBank:WP_002228079.1;Name=WP_002228079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228079.1;locus_tag=YPIP275_RS17095;product=hypothetical protein;protein_id=WP_002228079.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 32994 34337 . + . ID=gene-YPIP275_RS17100;Name=gntP;gbkey=Gene;gene=gntP;gene_biotype=protein_coding;locus_tag=YPIP275_RS17100;old_locus_tag=YPIP275_2273 NZ_AAOS02000019.1 Protein Homology CDS 32994 34337 . + 0 ID=cds-WP_002223676.1;Parent=gene-YPIP275_RS17100;Dbxref=GenBank:WP_002223676.1;Name=WP_002223676.1;gbkey=CDS;gene=gntP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223676.1;locus_tag=YPIP275_RS17100;product=gluconate permease GntP;protein_id=WP_002223676.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 35338 36996 . + . ID=gene-YPIP275_RS28865;Name=YPIP275_RS28865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28865 NZ_AAOS02000019.1 Protein Homology CDS 35338 36996 . + 0 ID=cds-WP_002213742.1;Parent=gene-YPIP275_RS28865;Dbxref=GenBank:WP_002213742.1;Name=WP_002213742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213742.1;locus_tag=YPIP275_RS28865;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_002213742.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 37113 39101 . + . ID=gene-YPIP275_RS28870;Name=YPIP275_RS28870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28870 NZ_AAOS02000019.1 Protein Homology CDS 37113 39101 . + 0 ID=cds-WP_013060314.1;Parent=gene-YPIP275_RS28870;Dbxref=GenBank:WP_013060314.1;Name=WP_013060314.1;Ontology_term=GO:0015474,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=autotransporter activity|0015474||IEA;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=YPIP275_RS28870;product=autotransporter family protein;protein_id=WP_013060314.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 39757 43527 . + . ID=gene-YPIP275_RS17115;Name=yapV;gbkey=Gene;gene=yapV;gene_biotype=protein_coding;locus_tag=YPIP275_RS17115;old_locus_tag=YPIP275_2275 NZ_AAOS02000019.1 Protein Homology CDS 39757 43527 . + 0 ID=cds-WP_002211399.1;Parent=gene-YPIP275_RS17115;Dbxref=GenBank:WP_002211399.1;Name=WP_002211399.1;gbkey=CDS;gene=yapV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211399.1;locus_tag=YPIP275_RS17115;product=autotransporter adhesin YapV;protein_id=WP_002211399.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 44113 46338 . + . ID=gene-YPIP275_RS17120;Name=YPIP275_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17120;old_locus_tag=YPIP275_2276 NZ_AAOS02000019.1 Protein Homology CDS 44113 46338 . + 0 ID=cds-WP_002211400.1;Parent=gene-YPIP275_RS17120;Dbxref=GenBank:WP_002211400.1;Name=WP_002211400.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104563.1;locus_tag=YPIP275_RS17120;product=type VI secretion system Vgr family protein;protein_id=WP_002211400.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 46364 47683 . + . ID=gene-YPIP275_RS17125;Name=YPIP275_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17125;old_locus_tag=YPIP275_2277 NZ_AAOS02000019.1 Protein Homology CDS 46364 47683 . + 0 ID=cds-WP_002211401.1;Parent=gene-YPIP275_RS17125;Dbxref=GenBank:WP_002211401.1;Name=WP_002211401.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193015.1;locus_tag=YPIP275_RS17125;product=tetratricopeptide repeat protein;protein_id=WP_002211401.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 47697 52013 . + . ID=gene-YPIP275_RS17130;Name=YPIP275_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17130;old_locus_tag=YPIP275_2278 NZ_AAOS02000019.1 Protein Homology CDS 47697 52013 . + 0 ID=cds-WP_002211402.1;Parent=gene-YPIP275_RS17130;Dbxref=GenBank:WP_002211402.1;Name=WP_002211402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211402.1;locus_tag=YPIP275_RS17130;product=RHS repeat-associated core domain-containing protein;protein_id=WP_002211402.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 52144 52530 . + . ID=gene-YPIP275_RS29375;Name=YPIP275_RS29375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29375 NZ_AAOS02000019.1 Protein Homology CDS 52144 52530 . + 0 ID=cds-WP_097608211.1;Parent=gene-YPIP275_RS29375;Dbxref=GenBank:WP_097608211.1;Name=WP_097608211.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026909.8;locus_tag=YPIP275_RS29375;product=Imm44 family immunity protein;protein_id=WP_097608211.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 53074 53487 . + . ID=gene-YPIP275_RS17140;Name=YPIP275_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17140;old_locus_tag=YPIP275_2280 NZ_AAOS02000019.1 Protein Homology CDS 53074 53487 . + 0 ID=cds-WP_002211404.1;Parent=gene-YPIP275_RS17140;Dbxref=GenBank:WP_002211404.1;Name=WP_002211404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211404.1;locus_tag=YPIP275_RS17140;product=YjaA family stress response protein;protein_id=WP_002211404.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 53667 55037 . - . ID=gene-YPIP275_RS17145;Name=YPIP275_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17145;old_locus_tag=YPIP275_2281 NZ_AAOS02000019.1 Protein Homology CDS 53667 55037 . - 0 ID=cds-WP_002211405.1;Parent=gene-YPIP275_RS17145;Dbxref=GenBank:WP_002211405.1;Name=WP_002211405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211405.1;locus_tag=YPIP275_RS17145;product=SLC13 family permease;protein_id=WP_002211405.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 55319 56338 . - . ID=gene-YPIP275_RS17150;Name=YPIP275_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17150;old_locus_tag=YPIP275_2282 NZ_AAOS02000019.1 Protein Homology CDS 55319 56338 . - 0 ID=cds-WP_002211406.1;Parent=gene-YPIP275_RS17150;Dbxref=GenBank:WP_002211406.1;Name=WP_002211406.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211406.1;locus_tag=YPIP275_RS17150;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002211406.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 56632 57795 . + . ID=gene-YPIP275_RS17155;Name=YPIP275_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17155;old_locus_tag=YPIP275_2283 NZ_AAOS02000019.1 Protein Homology CDS 56632 57795 . + 0 ID=cds-WP_002211407.1;Parent=gene-YPIP275_RS17155;Dbxref=GenBank:WP_002211407.1;Name=WP_002211407.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211407.1;locus_tag=YPIP275_RS17155;product=cellulase family glycosylhydrolase;protein_id=WP_002211407.1;transl_table=11 NZ_AAOS02000019.1 RefSeq pseudogene 57685 59038 . - . ID=gene-YPIP275_RS28875;Name=YPIP275_RS28875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28875;pseudo=true NZ_AAOS02000019.1 Protein Homology CDS 57685 59038 . - 0 ID=cds-YPIP275_RS28875;Parent=gene-YPIP275_RS28875;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558220.1;locus_tag=YPIP275_RS28875;product=IS3-like element IS1661 family transposase;pseudo=true;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 59699 60001 . + . ID=gene-YPIP275_RS17170;Name=YPIP275_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17170 NZ_AAOS02000019.1 Protein Homology CDS 59699 60001 . + 0 ID=cds-WP_002213746.1;Parent=gene-YPIP275_RS17170;Dbxref=GenBank:WP_002213746.1;Name=WP_002213746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230614.1;locus_tag=YPIP275_RS17170;product=YjeO family protein;protein_id=WP_002213746.1;transl_table=11 NZ_AAOS02000019.1 RefSeq pseudogene 60251 60719 . + . ID=gene-YPIP275_RS17175;Name=YPIP275_RS17175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS17175;old_locus_tag=YPIP275_2287;pseudo=true NZ_AAOS02000019.1 Protein Homology CDS 60251 60719 . + 0 ID=cds-YPIP275_RS17175;Parent=gene-YPIP275_RS17175;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165921.1;locus_tag=YPIP275_RS17175;product=outer membrane lipoprotein;pseudo=true;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 60865 61236 . - . ID=gene-YPIP275_RS17180;Name=YPIP275_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17180 NZ_AAOS02000019.1 Protein Homology CDS 60865 61236 . - 0 ID=cds-WP_002213748.1;Parent=gene-YPIP275_RS17180;Dbxref=GenBank:WP_002213748.1;Name=WP_002213748.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF017470.7;locus_tag=YPIP275_RS17180;product=DUF805 domain-containing protein;protein_id=WP_002213748.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 61220 61675 . - . ID=gene-YPIP275_RS17185;Name=YPIP275_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17185;old_locus_tag=YPIP275_2288 NZ_AAOS02000019.1 Protein Homology CDS 61220 61675 . - 0 ID=cds-WP_002211409.1;Parent=gene-YPIP275_RS17185;Dbxref=GenBank:WP_002211409.1;Name=WP_002211409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104535.1;locus_tag=YPIP275_RS17185;product=hypothetical protein;protein_id=WP_002211409.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 61672 62268 . - . ID=gene-YPIP275_RS17190;Name=YPIP275_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17190;old_locus_tag=YPIP275_2289 NZ_AAOS02000019.1 Protein Homology CDS 61672 62268 . - 0 ID=cds-WP_002211410.1;Parent=gene-YPIP275_RS17190;Dbxref=GenBank:WP_002211410.1;Name=WP_002211410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211410.1;locus_tag=YPIP275_RS17190;product=hypothetical protein;protein_id=WP_002211410.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 62728 63639 . - . ID=gene-YPIP275_RS17200;Name=lafU;gbkey=Gene;gene=lafU;gene_biotype=protein_coding;locus_tag=YPIP275_RS17200;old_locus_tag=YPIP275_2290 NZ_AAOS02000019.1 Protein Homology CDS 62728 63639 . - 0 ID=cds-WP_002211411.1;Parent=gene-YPIP275_RS17200;Dbxref=GenBank:WP_002211411.1;Name=WP_002211411.1;gbkey=CDS;gene=lafU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413974.1;locus_tag=YPIP275_RS17200;product=putative lateral flagellar export/assembly protein LafU;protein_id=WP_002211411.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 63639 64505 . - . ID=gene-YPIP275_RS17205;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=YPIP275_RS17205;old_locus_tag=YPIP275_2291 NZ_AAOS02000019.1 Protein Homology CDS 63639 64505 . - 0 ID=cds-WP_002211412.1;Parent=gene-YPIP275_RS17205;Dbxref=GenBank:WP_002211412.1;Name=WP_002211412.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104533.1;locus_tag=YPIP275_RS17205;product=flagellar motor stator protein MotA;protein_id=WP_002211412.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 64521 65216 . - . ID=gene-YPIP275_RS17210;Name=YPIP275_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17210;old_locus_tag=YPIP275_2292 NZ_AAOS02000019.1 Protein Homology CDS 64521 65216 . - 0 ID=cds-WP_002211413.1;Parent=gene-YPIP275_RS17210;Dbxref=GenBank:WP_002211413.1;Name=WP_002211413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211413.1;locus_tag=YPIP275_RS17210;product=FliA/WhiG family RNA polymerase sigma factor;protein_id=WP_002211413.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 65222 65692 . - . ID=gene-YPIP275_RS17215;Name=YPIP275_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17215;old_locus_tag=YPIP275_2293 NZ_AAOS02000019.1 Protein Homology CDS 65222 65692 . - 0 ID=cds-WP_002211414.1;Parent=gene-YPIP275_RS17215;Dbxref=GenBank:WP_002211414.1;Name=WP_002211414.1;Ontology_term=GO:0006935,GO:0071978,GO:0009425;gbkey=CDS;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent swarming motility|0071978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193046.1;locus_tag=YPIP275_RS17215;product=flagellar basal body-associated FliL family protein;protein_id=WP_002211414.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 65731 66912 . - . ID=gene-YPIP275_RS17220;Name=YPIP275_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17220;old_locus_tag=YPIP275_2294 NZ_AAOS02000019.1 Protein Homology CDS 65731 66912 . - 0 ID=cds-WP_002211415.1;Parent=gene-YPIP275_RS17220;Dbxref=GenBank:WP_002211415.1;Name=WP_002211415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211415.1;locus_tag=YPIP275_RS17220;product=flagellar hook-length control protein FliK;protein_id=WP_002211415.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 66914 67240 . - . ID=gene-YPIP275_RS17225;Name=YPIP275_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17225;old_locus_tag=YPIP275_2295 NZ_AAOS02000019.1 Protein Homology CDS 66914 67240 . - 0 ID=cds-WP_002211416.1;Parent=gene-YPIP275_RS17225;Dbxref=GenBank:WP_002211416.1;Name=WP_002211416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104529.1;locus_tag=YPIP275_RS17225;product=hypothetical protein;protein_id=WP_002211416.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 67242 67622 . - . ID=gene-YPIP275_RS17230;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=YPIP275_RS17230;old_locus_tag=YPIP275_2296 NZ_AAOS02000019.1 Protein Homology CDS 67242 67622 . - 0 ID=cds-WP_002211417.1;Parent=gene-YPIP275_RS17230;Dbxref=GenBank:WP_002211417.1;Name=WP_002211417.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211417.1;locus_tag=YPIP275_RS17230;product=flagellar export chaperone FliS;protein_id=WP_002211417.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 67632 68909 . - . ID=gene-YPIP275_RS17235;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=YPIP275_RS17235;old_locus_tag=YPIP275_2297 NZ_AAOS02000019.1 Protein Homology CDS 67632 68909 . - 0 ID=cds-WP_002211418.1;Parent=gene-YPIP275_RS17235;Dbxref=GenBank:WP_002211418.1;Name=WP_002211418.1;Ontology_term=GO:0007155,GO:0009288;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211418.1;locus_tag=YPIP275_RS17235;product=flagellar filament capping protein FliD;protein_id=WP_002211418.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 69129 70334 . - . ID=gene-YPIP275_RS17240;Name=YPIP275_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17240;old_locus_tag=YPIP275_2298 NZ_AAOS02000019.1 Protein Homology CDS 69129 70334 . - 0 ID=cds-WP_002211419.1;Parent=gene-YPIP275_RS17240;Dbxref=GenBank:WP_002211419.1;Name=WP_002211419.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211419.1;locus_tag=YPIP275_RS17240;product=flagellin N-terminal helical domain-containing protein;protein_id=WP_002211419.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 70617 71816 . - . ID=gene-YPIP275_RS17245;Name=YPIP275_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17245;old_locus_tag=YPIP275_2299 NZ_AAOS02000019.1 Protein Homology CDS 70617 71816 . - 0 ID=cds-WP_002211420.1;Parent=gene-YPIP275_RS17245;Dbxref=GenBank:WP_002211420.1;Name=WP_002211420.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211419.1;locus_tag=YPIP275_RS17245;product=flagellin N-terminal helical domain-containing protein;protein_id=WP_002211420.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 72331 73554 . - . ID=gene-YPIP275_RS17250;Name=YPIP275_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17250;old_locus_tag=YPIP275_2300 NZ_AAOS02000019.1 Protein Homology CDS 72331 73554 . - 0 ID=cds-WP_002211421.1;Parent=gene-YPIP275_RS17250;Dbxref=GenBank:WP_002211421.1;Name=WP_002211421.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213753.1;locus_tag=YPIP275_RS17250;product=flagellin N-terminal helical domain-containing protein;protein_id=WP_002211421.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 74180 75226 . + . ID=gene-YPIP275_RS17255;Name=YPIP275_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17255;old_locus_tag=YPIP275_2301 NZ_AAOS02000019.1 Protein Homology CDS 74180 75226 . + 0 ID=cds-WP_002211422.1;Parent=gene-YPIP275_RS17255;Dbxref=GenBank:WP_002211422.1;Name=WP_002211422.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211422.1;locus_tag=YPIP275_RS17255;product=transcriptional regulator;protein_id=WP_002211422.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 75207 75653 . + . ID=gene-YPIP275_RS17260;Name=YPIP275_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17260;old_locus_tag=YPIP275_2302 NZ_AAOS02000019.1 Protein Homology CDS 75207 75653 . + 0 ID=cds-WP_002211423.1;Parent=gene-YPIP275_RS17260;Dbxref=GenBank:WP_002211423.1;Name=WP_002211423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211423.1;locus_tag=YPIP275_RS17260;product=hypothetical protein;protein_id=WP_002211423.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 75817 76830 . - . ID=gene-YPIP275_RS17265;Name=YPIP275_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17265;old_locus_tag=YPIP275_2303 NZ_AAOS02000019.1 Protein Homology CDS 75817 76830 . - 0 ID=cds-WP_002211424.1;Parent=gene-YPIP275_RS17265;Dbxref=GenBank:WP_002211424.1;Name=WP_002211424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012228926.1;locus_tag=YPIP275_RS17265;product=hypothetical protein;protein_id=WP_002211424.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 76842 77765 . - . ID=gene-YPIP275_RS17270;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=YPIP275_RS17270;old_locus_tag=YPIP275_2304 NZ_AAOS02000019.1 Protein Homology CDS 76842 77765 . - 0 ID=cds-WP_002211425.1;Parent=gene-YPIP275_RS17270;Dbxref=GenBank:WP_002211425.1;Name=WP_002211425.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211425.1;locus_tag=YPIP275_RS17270;product=flagellar hook-associated protein FlgL;protein_id=WP_002211425.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 77794 79155 . - . ID=gene-YPIP275_RS17275;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=YPIP275_RS17275;old_locus_tag=YPIP275_2305 NZ_AAOS02000019.1 Protein Homology CDS 77794 79155 . - 0 ID=cds-WP_002211426.1;Parent=gene-YPIP275_RS17275;Dbxref=GenBank:WP_002211426.1;Name=WP_002211426.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211426.1;locus_tag=YPIP275_RS17275;product=flagellar hook-associated protein FlgK;protein_id=WP_002211426.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 79268 79561 . - . ID=gene-YPIP275_RS17280;Name=YPIP275_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17280;old_locus_tag=YPIP275_2306 NZ_AAOS02000019.1 Protein Homology CDS 79268 79561 . - 0 ID=cds-WP_002211427.1;Parent=gene-YPIP275_RS17280;Dbxref=GenBank:WP_002211427.1;Name=WP_002211427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211427.1;locus_tag=YPIP275_RS17280;product=rod-binding protein;protein_id=WP_002211427.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 79571 80746 . - . ID=gene-YPIP275_RS17285;Name=YPIP275_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17285;old_locus_tag=YPIP275_2307 NZ_AAOS02000019.1 Protein Homology CDS 79571 80746 . - 0 ID=cds-WP_002211428.1;Parent=gene-YPIP275_RS17285;Dbxref=GenBank:WP_002211428.1;Name=WP_002211428.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211428.1;locus_tag=YPIP275_RS17285;product=flagellar basal body P-ring protein FlgI;protein_id=WP_002211428.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 80760 81425 . - . ID=gene-YPIP275_RS17290;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=YPIP275_RS17290;old_locus_tag=YPIP275_2308 NZ_AAOS02000019.1 Protein Homology CDS 80760 81425 . - 0 ID=cds-WP_002211429.1;Parent=gene-YPIP275_RS17290;Dbxref=GenBank:WP_002211429.1;Name=WP_002211429.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211429.1;locus_tag=YPIP275_RS17290;product=flagellar basal body L-ring protein FlgH;protein_id=WP_002211429.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 81460 82245 . - . ID=gene-YPIP275_RS17295;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=YPIP275_RS17295;old_locus_tag=YPIP275_2309 NZ_AAOS02000019.1 Protein Homology CDS 81460 82245 . - 0 ID=cds-WP_002211430.1;Parent=gene-YPIP275_RS17295;Dbxref=GenBank:WP_002211430.1;Name=WP_002211430.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211430.1;locus_tag=YPIP275_RS17295;product=flagellar basal-body rod protein FlgG;protein_id=WP_002211430.1;transl_table=11 NZ_AAOS02000019.1 RefSeq pseudogene 82313 82930 . - . ID=gene-YPIP275_RS17300;Name=YPIP275_RS17300;end_range=82930,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS17300;old_locus_tag=YPIP275_2310;partial=true;pseudo=true NZ_AAOS02000019.1 Protein Homology CDS 82313 82930 . - 0 ID=cds-YPIP275_RS17300;Parent=gene-YPIP275_RS17300;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=82930,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104517.1;locus_tag=YPIP275_RS17300;partial=true;product=flagellar basal body rod protein FlgF;pseudo=true;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 83073 83531 . + . ID=gene-YPIP275_RS17310;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS17310;old_locus_tag=YPIP275_2311 NZ_AAOS02000019.1 Protein Homology CDS 83073 83531 . + 0 ID=cds-WP_002213759.1-9;Parent=gene-YPIP275_RS17310;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS17310;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000019.1 RefSeq pseudogene 83639 83755 . - . ID=gene-YPIP275_RS28880;Name=YPIP275_RS28880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28880;partial=true;pseudo=true;start_range=.,83639 NZ_AAOS02000019.1 Protein Homology CDS 83639 83755 . - 0 ID=cds-YPIP275_RS28880;Parent=gene-YPIP275_RS28880;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0071973;gbkey=CDS;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104517.1;locus_tag=YPIP275_RS28880;partial=true;product=flagellar basal body protein;pseudo=true;start_range=.,83639;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 83755 84996 . - . ID=gene-YPIP275_RS17320;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=YPIP275_RS17320;old_locus_tag=YPIP275_2312 NZ_AAOS02000019.1 Protein Homology CDS 83755 84996 . - 0 ID=cds-WP_002211432.1;Parent=gene-YPIP275_RS17320;Dbxref=GenBank:WP_002211432.1;Name=WP_002211432.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583118.1;locus_tag=YPIP275_RS17320;product=flagellar hook protein FlgE;protein_id=WP_002211432.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 85051 85707 . - . ID=gene-YPIP275_RS17325;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=YPIP275_RS17325;old_locus_tag=YPIP275_2313 NZ_AAOS02000019.1 Protein Homology CDS 85051 85707 . - 0 ID=cds-WP_002211433.1;Parent=gene-YPIP275_RS17325;Dbxref=GenBank:WP_002211433.1;Name=WP_002211433.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211433.1;locus_tag=YPIP275_RS17325;product=flagellar hook assembly protein FlgD;protein_id=WP_002211433.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 85710 86135 . - . ID=gene-YPIP275_RS17330;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=YPIP275_RS17330;old_locus_tag=YPIP275_2314 NZ_AAOS02000019.1 Protein Homology CDS 85710 86135 . - 0 ID=cds-WP_002211434.1;Parent=gene-YPIP275_RS17330;Dbxref=GenBank:WP_002211434.1;Name=WP_002211434.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104514.1;locus_tag=YPIP275_RS17330;product=flagellar basal body rod protein FlgC;protein_id=WP_002211434.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 86138 86584 . - . ID=gene-YPIP275_RS17335;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=YPIP275_RS17335;old_locus_tag=YPIP275_2315 NZ_AAOS02000019.1 Protein Homology CDS 86138 86584 . - 0 ID=cds-WP_002211435.1;Parent=gene-YPIP275_RS17335;Dbxref=GenBank:WP_002211435.1;Name=WP_002211435.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211435.1;locus_tag=YPIP275_RS17335;product=flagellar basal body rod protein FlgB;protein_id=WP_002211435.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 86642 87490 . + . ID=gene-YPIP275_RS17340;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=YPIP275_RS17340;old_locus_tag=YPIP275_2316 NZ_AAOS02000019.1 Protein Homology CDS 86642 87490 . + 0 ID=cds-WP_002211436.1;Parent=gene-YPIP275_RS17340;Dbxref=GenBank:WP_002211436.1;Name=WP_002211436.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211436.1;locus_tag=YPIP275_RS17340;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_002211436.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 87719 87985 . + . ID=gene-YPIP275_RS17345;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=YPIP275_RS17345;old_locus_tag=YPIP275_2317 NZ_AAOS02000019.1 Protein Homology CDS 87719 87985 . + 0 ID=cds-WP_002211437.1;Parent=gene-YPIP275_RS17345;Dbxref=GenBank:WP_002211437.1;Name=WP_002211437.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413978.1;locus_tag=YPIP275_RS17345;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_002211437.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 87992 88417 . + . ID=gene-YPIP275_RS17350;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=YPIP275_RS17350;old_locus_tag=YPIP275_2318 NZ_AAOS02000019.1 Protein Homology CDS 87992 88417 . + 0 ID=cds-WP_002211438.1;Parent=gene-YPIP275_RS17350;Dbxref=GenBank:WP_002211438.1;Name=WP_002211438.1;Ontology_term=GO:0044780,GO:0005515;gbkey=CDS;gene=flgN;go_function=protein binding|0005515||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211438.1;locus_tag=YPIP275_RS17350;product=flagellar protein FlgN;protein_id=WP_002211438.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 88745 89128 . - . ID=gene-YPIP275_RS17355;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS17355;old_locus_tag=YPIP275_2319 NZ_AAOS02000019.1 Protein Homology CDS 88745 89128 . - 0 ID=cds-WP_002211439.1;Parent=gene-YPIP275_RS17355;Dbxref=GenBank:WP_002211439.1;Name=WP_002211439.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211439.1;locus_tag=YPIP275_RS17355;product=flagellar export protein FliJ;protein_id=WP_002211439.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 89132 90472 . - . ID=gene-YPIP275_RS17360;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=YPIP275_RS17360;old_locus_tag=YPIP275_2320 NZ_AAOS02000019.1 Protein Homology CDS 89132 90472 . - 0 ID=cds-WP_002211440.1;Parent=gene-YPIP275_RS17360;Dbxref=GenBank:WP_002211440.1;Name=WP_002211440.1;Ontology_term=GO:0030254,GO:0005524,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104508.1;locus_tag=YPIP275_RS17360;product=flagellar protein export ATPase FliI;protein_id=WP_002211440.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 90465 91181 . - . ID=gene-YPIP275_RS17365;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=YPIP275_RS17365;old_locus_tag=YPIP275_2321 NZ_AAOS02000019.1 Protein Homology CDS 90465 91181 . - 0 ID=cds-WP_002213763.1;Parent=gene-YPIP275_RS17365;Dbxref=GenBank:WP_002213763.1;Name=WP_002213763.1;gbkey=CDS;gene=fliH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213763.1;locus_tag=YPIP275_RS17365;product=flagellar assembly protein FliH;protein_id=WP_002213763.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 91186 92229 . - . ID=gene-YPIP275_RS17370;Name=YPIP275_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17370;old_locus_tag=YPIP275_2322 NZ_AAOS02000019.1 Protein Homology CDS 91186 92229 . - 0 ID=cds-WP_002211442.1;Parent=gene-YPIP275_RS17370;Dbxref=GenBank:WP_002211442.1;Name=WP_002211442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211442.1;locus_tag=YPIP275_RS17370;product=flagellar motor switch protein FliG;protein_id=WP_002211442.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 92201 93841 . - . ID=gene-YPIP275_RS17375;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=YPIP275_RS17375;old_locus_tag=YPIP275_2323 NZ_AAOS02000019.1 Protein Homology CDS 92201 93841 . - 0 ID=cds-WP_002211443.1;Parent=gene-YPIP275_RS17375;Dbxref=GenBank:WP_002211443.1;Name=WP_002211443.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413980.1;locus_tag=YPIP275_RS17375;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_002211443.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 93851 94231 . - . ID=gene-YPIP275_RS17380;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=YPIP275_RS17380;old_locus_tag=YPIP275_2324 NZ_AAOS02000019.1 Protein Homology CDS 93851 94231 . - 0 ID=cds-WP_002211444.1;Parent=gene-YPIP275_RS17380;Dbxref=GenBank:WP_002211444.1;Name=WP_002211444.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104504.1;locus_tag=YPIP275_RS17380;product=flagellar hook-basal body complex protein FliE;protein_id=WP_002211444.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 94248 95276 . - . ID=gene-YPIP275_RS17385;Name=YPIP275_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17385;old_locus_tag=YPIP275_2325 NZ_AAOS02000019.1 Protein Homology CDS 94248 95276 . - 0 ID=cds-WP_002211445.1;Parent=gene-YPIP275_RS17385;Dbxref=GenBank:WP_002211445.1;Name=WP_002211445.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104503.1;locus_tag=YPIP275_RS17385;product=sigma-54 interaction domain-containing protein;protein_id=WP_002211445.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 95799 96698 . + . ID=gene-YPIP275_RS17390;Name=YPIP275_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17390;old_locus_tag=YPIP275_2326 NZ_AAOS02000019.1 Protein Homology CDS 95799 96698 . + 0 ID=cds-WP_002211446.1;Parent=gene-YPIP275_RS17390;Dbxref=GenBank:WP_002211446.1;Name=WP_002211446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413981.1;locus_tag=YPIP275_RS17390;product=FliM/FliN family flagellar motor switch protein;protein_id=WP_002211446.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 96691 97104 . + . ID=gene-YPIP275_RS17395;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=YPIP275_RS17395;old_locus_tag=YPIP275_2327 NZ_AAOS02000019.1 Protein Homology CDS 96691 97104 . + 0 ID=cds-WP_002211447.1;Parent=gene-YPIP275_RS17395;Dbxref=GenBank:WP_002211447.1;Name=WP_002211447.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104501.1;locus_tag=YPIP275_RS17395;product=flagellar motor switch protein FliN;protein_id=WP_002211447.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 97101 97871 . + . ID=gene-YPIP275_RS17400;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=YPIP275_RS17400;old_locus_tag=YPIP275_2328 NZ_AAOS02000019.1 Protein Homology CDS 97101 97871 . + 0 ID=cds-WP_002211448.1;Parent=gene-YPIP275_RS17400;Dbxref=GenBank:WP_002211448.1;Name=WP_002211448.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211448.1;locus_tag=YPIP275_RS17400;product=flagellar type III secretion system pore protein FliP;protein_id=WP_002211448.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 97873 98145 . + . ID=gene-YPIP275_RS17405;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS17405;old_locus_tag=YPIP275_2329 NZ_AAOS02000019.1 Protein Homology CDS 97873 98145 . + 0 ID=cds-WP_002211449.1;Parent=gene-YPIP275_RS17405;Dbxref=GenBank:WP_002211449.1;Name=WP_002211449.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390057.1;locus_tag=YPIP275_RS17405;product=flagellar biosynthesis protein FliQ;protein_id=WP_002211449.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 98152 98925 . + . ID=gene-YPIP275_RS17410;Name=YPIP275_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17410;old_locus_tag=YPIP275_2330 NZ_AAOS02000019.1 Protein Homology CDS 98152 98925 . + 0 ID=cds-WP_002213766.1;Parent=gene-YPIP275_RS17410;Dbxref=GenBank:WP_002213766.1;Name=WP_002213766.1;Ontology_term=GO:0006605,GO:0030254,GO:0044780,GO:0071973;gbkey=CDS;go_process=protein targeting|0006605||IEA,protein secretion by the type III secretion system|0030254||IEA,bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213766.1;locus_tag=YPIP275_RS17410;product=flagellar biosynthetic protein FliR;protein_id=WP_002213766.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 98925 100058 . + . ID=gene-YPIP275_RS17415;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=YPIP275_RS17415;old_locus_tag=YPIP275_2331 NZ_AAOS02000019.1 Protein Homology CDS 98925 100058 . + 0 ID=cds-WP_002211451.1;Parent=gene-YPIP275_RS17415;Dbxref=GenBank:WP_002211451.1;Name=WP_002211451.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211451.1;locus_tag=YPIP275_RS17415;product=flagellar biosynthesis protein FlhB;protein_id=WP_002211451.1;transl_table=11 NZ_AAOS02000019.1 RefSeq pseudogene 100045 102142 . + . ID=gene-YPIP275_RS17420;Name=YPIP275_RS17420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS17420;pseudo=true NZ_AAOS02000019.1 Protein Homology CDS 100045 102142 . + 0 ID=cds-YPIP275_RS17420;Parent=gene-YPIP275_RS17420;Note=frameshifted;Ontology_term=GO:0009306,GO:0044780,GO:0071978;gbkey=CDS;go_process=protein secretion|0009306||IEA,bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent swarming motility|0071978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906166.1;locus_tag=YPIP275_RS17420;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 102372 102941 . + . ID=gene-YPIP275_RS17425;Name=YPIP275_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17425 NZ_AAOS02000019.1 Protein Homology CDS 102372 102941 . + 0 ID=cds-WP_002228082.1;Parent=gene-YPIP275_RS17425;Dbxref=GenBank:WP_002228082.1;Name=WP_002228082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303571.1;locus_tag=YPIP275_RS17425;product=DUF2931 family protein;protein_id=WP_002228082.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 103033 104028 . - . ID=gene-YPIP275_RS17430;Name=YPIP275_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17430;old_locus_tag=YPIP275_2336 NZ_AAOS02000019.1 Protein Homology CDS 103033 104028 . - 0 ID=cds-WP_002211454.1;Parent=gene-YPIP275_RS17430;Dbxref=GenBank:WP_002211454.1;Name=WP_002211454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211454.1;locus_tag=YPIP275_RS17430;product=lysozyme inhibitor LprI family protein;protein_id=WP_002211454.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 104884 105963 . + . ID=gene-YPIP275_RS17435;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=YPIP275_RS17435;old_locus_tag=YPIP275_2337 NZ_AAOS02000019.1 Protein Homology CDS 104884 105963 . + 0 ID=cds-WP_002211455.1;Parent=gene-YPIP275_RS17435;Dbxref=GenBank:WP_002211455.1;Name=WP_002211455.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211455.1;locus_tag=YPIP275_RS17435;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_002211455.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 106175 107281 . - . ID=gene-YPIP275_RS17440;Name=YPIP275_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17440;old_locus_tag=YPIP275_2338 NZ_AAOS02000019.1 Protein Homology CDS 106175 107281 . - 0 ID=cds-WP_002211456.1;Parent=gene-YPIP275_RS17440;Dbxref=GenBank:WP_002211456.1;Name=WP_002211456.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211456.1;locus_tag=YPIP275_RS17440;product=fimbrial protein;protein_id=WP_002211456.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 107306 108025 . - . ID=gene-YPIP275_RS17445;Name=YPIP275_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17445;old_locus_tag=YPIP275_2339 NZ_AAOS02000019.1 Protein Homology CDS 107306 108025 . - 0 ID=cds-WP_002211457.1;Parent=gene-YPIP275_RS17445;Dbxref=GenBank:WP_002211457.1;Name=WP_002211457.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211457.1;locus_tag=YPIP275_RS17445;product=fimbrial biogenesis chaperone;protein_id=WP_002211457.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 108043 110523 . - . ID=gene-YPIP275_RS17450;Name=YPIP275_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17450;old_locus_tag=YPIP275_2340 NZ_AAOS02000019.1 Protein Homology CDS 108043 110523 . - 0 ID=cds-WP_002211458.1;Parent=gene-YPIP275_RS17450;Dbxref=GenBank:WP_002211458.1;Name=WP_002211458.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211458.1;locus_tag=YPIP275_RS17450;product=fimbria/pilus outer membrane usher protein;protein_id=WP_002211458.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 110876 111334 . - . ID=gene-YPIP275_RS17455;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS17455;old_locus_tag=YPIP275_2341 NZ_AAOS02000019.1 Protein Homology CDS 110876 111334 . - 0 ID=cds-WP_002213759.1-10;Parent=gene-YPIP275_RS17455;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS17455;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 111586 112044 . - . ID=gene-YPIP275_RS17465;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS17465;old_locus_tag=YPIP275_2342 NZ_AAOS02000019.1 Protein Homology CDS 111586 112044 . - 0 ID=cds-WP_002213775.1-16;Parent=gene-YPIP275_RS17465;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS17465;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 112244 112666 . + . ID=gene-YPIP275_RS17470;Name=YPIP275_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17470;old_locus_tag=YPIP275_2343 NZ_AAOS02000019.1 Protein Homology CDS 112244 112666 . + 0 ID=cds-WP_002211459.1;Parent=gene-YPIP275_RS17470;Dbxref=GenBank:WP_002211459.1;Name=WP_002211459.1;Ontology_term=GO:0006508,GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211459.1;locus_tag=YPIP275_RS17470;product=A24 family peptidase;protein_id=WP_002211459.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 112718 113584 . + . ID=gene-YPIP275_RS17475;Name=YPIP275_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17475;old_locus_tag=YPIP275_2344 NZ_AAOS02000019.1 Protein Homology CDS 112718 113584 . + 0 ID=cds-WP_002211460.1;Parent=gene-YPIP275_RS17475;Dbxref=GenBank:WP_002211460.1;Name=WP_002211460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413995.1;locus_tag=YPIP275_RS17475;product=hypothetical protein;protein_id=WP_002211460.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 113581 114435 . + . ID=gene-YPIP275_RS17480;Name=YPIP275_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17480;old_locus_tag=YPIP275_2345 NZ_AAOS02000019.1 Protein Homology CDS 113581 114435 . + 0 ID=cds-WP_002213778.1;Parent=gene-YPIP275_RS17480;Dbxref=GenBank:WP_002213778.1;Name=WP_002213778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213778.1;locus_tag=YPIP275_RS17480;product=pilus assembly protein N-terminal domain-containing protein;protein_id=WP_002213778.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 114450 114899 . + . ID=gene-YPIP275_RS17485;Name=YPIP275_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17485;old_locus_tag=YPIP275_2346 NZ_AAOS02000019.1 Protein Homology CDS 114450 114899 . + 0 ID=cds-WP_002228297.1;Parent=gene-YPIP275_RS17485;Dbxref=GenBank:WP_002228297.1;Name=WP_002228297.1;Ontology_term=GO:0009306;gbkey=CDS;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011566330.1;locus_tag=YPIP275_RS17485;product=secretin GspD/PilQ domain-containing protein;protein_id=WP_002228297.1;transl_table=11 NZ_AAOS02000019.1 RefSeq gene 114896 115186 . + . ID=gene-YPIP275_RS17490;Name=YPIP275_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS17490 NZ_AAOS02000019.1 Protein Homology CDS 114896 115186 . + 0 ID=cds-WP_002213782.1;Parent=gene-YPIP275_RS17490;Dbxref=GenBank:WP_002213782.1;Name=WP_002213782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213782.1;locus_tag=YPIP275_RS17490;product=hypothetical protein;protein_id=WP_002213782.1;transl_table=11 NZ_AAOS02000019.1 RefSeq pseudogene 115197 115833 . + . ID=gene-YPIP275_RS17495;Name=YPIP275_RS17495;end_range=115833,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS17495;old_locus_tag=YPIP275_2347;partial=true;pseudo=true NZ_AAOS02000019.1 Protein Homology CDS 115197 115833 . + 0 ID=cds-YPIP275_RS17495;Parent=gene-YPIP275_RS17495;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=115833,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413996.1;locus_tag=YPIP275_RS17495;partial=true;product=pilus assembly protein CpaE;pseudo=true;transl_table=11 ##sequence-region NZ_AAOS02000018.1 1 120911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000018.1 RefSeq region 1 120911 . + . ID=NZ_AAOS02000018.1:1..120911;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000018.1 RefSeq gene 1 258 . + . ID=gene-YPIP275_RS16480;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16480;old_locus_tag=YPIP275_3752;partial=true;start_range=.,1 NZ_AAOS02000018.1 Protein Homology CDS 1 258 . + 0 ID=cds-WP_002211285.1;Parent=gene-YPIP275_RS16480;Dbxref=GenBank:WP_002211285.1;Name=WP_002211285.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650072.1;locus_tag=YPIP275_RS16480;partial=true;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_002211285.1;start_range=.,1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 524 712 . - . ID=gene-YPIP275_RS16485;Name=YPIP275_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16485;old_locus_tag=YPIP275_3753 NZ_AAOS02000018.1 Protein Homology CDS 524 712 . - 0 ID=cds-WP_002211286.1;Parent=gene-YPIP275_RS16485;Dbxref=GenBank:WP_002211286.1;Name=WP_002211286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211286.1;locus_tag=YPIP275_RS16485;product=hypothetical protein;protein_id=WP_002211286.1;transl_table=11 NZ_AAOS02000018.1 RefSeq pseudogene 958 1260 . + . ID=gene-YPIP275_RS16490;Name=YPIP275_RS16490;end_range=1260,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS16490;old_locus_tag=YPIP275_3754;partial=true;pseudo=true NZ_AAOS02000018.1 Protein Homology CDS 958 1260 . + 0 ID=cds-YPIP275_RS16490;Parent=gene-YPIP275_RS16490;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1260,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105370.1;locus_tag=YPIP275_RS16490;partial=true;product=beta-ketoacyl synthase N-terminal-like domain-containing protein;pseudo=true;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 1346 2368 . + . ID=gene-YPIP275_RS16495;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16495;old_locus_tag=YPIP275_3755 NZ_AAOS02000018.1 Protein Homology CDS 1346 2368 . + 0 ID=cds-WP_000255944.1-15;Parent=gene-YPIP275_RS16495;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS16495;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 2365 3147 . + . ID=gene-YPIP275_RS16500;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS16500;old_locus_tag=YPIP275_3756 NZ_AAOS02000018.1 Protein Homology CDS 2365 3147 . + 0 ID=cds-WP_001317493.1-19;Parent=gene-YPIP275_RS16500;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS16500;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000018.1 RefSeq pseudogene 3217 4191 . + . ID=gene-YPIP275_RS16505;Name=YPIP275_RS16505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS16505;old_locus_tag=YPIP275_3757;partial=true;pseudo=true;start_range=.,3217 NZ_AAOS02000018.1 Protein Homology CDS 3217 4191 . + 0 ID=cds-YPIP275_RS16505;Parent=gene-YPIP275_RS16505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650074.1;locus_tag=YPIP275_RS16505;partial=true;product=beta-ketoacyl-ACP synthase;pseudo=true;start_range=.,3217;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 4308 4766 . - . ID=gene-YPIP275_RS16510;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16510;old_locus_tag=YPIP275_3758 NZ_AAOS02000018.1 Protein Homology CDS 4308 4766 . - 0 ID=cds-WP_002213775.1-17;Parent=gene-YPIP275_RS16510;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS16510;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 4964 5131 . - . ID=gene-YPIP275_RS16520;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=YPIP275_RS16520 NZ_AAOS02000018.1 Protein Homology CDS 4964 5131 . - 0 ID=cds-WP_002228015.1;Parent=gene-YPIP275_RS16520;Dbxref=GenBank:WP_002228015.1;Name=WP_002228015.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013574871.1;locus_tag=YPIP275_RS16520;product=ribosome modulation factor;protein_id=WP_002228015.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 5401 5979 . - . ID=gene-YPIP275_RS16530;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=YPIP275_RS16530;old_locus_tag=YPIP275_3759 NZ_AAOS02000018.1 Protein Homology CDS 5401 5979 . - 0 ID=cds-WP_002211289.1;Parent=gene-YPIP275_RS16530;Dbxref=GenBank:WP_002211289.1;Name=WP_002211289.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211289.1;locus_tag=YPIP275_RS16530;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_002211289.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 5976 7628 . - . ID=gene-YPIP275_RS16535;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=YPIP275_RS16535;old_locus_tag=YPIP275_3760 NZ_AAOS02000018.1 Protein Homology CDS 5976 7628 . - 0 ID=cds-WP_002211290.1;Parent=gene-YPIP275_RS16535;Dbxref=GenBank:WP_002211290.1;Name=WP_002211290.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650076.1;locus_tag=YPIP275_RS16535;product=intermembrane transport protein PqiB;protein_id=WP_002211290.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 7615 8901 . - . ID=gene-YPIP275_RS16540;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16540;old_locus_tag=YPIP275_3761 NZ_AAOS02000018.1 Protein Homology CDS 7615 8901 . - 0 ID=cds-WP_002211291.1;Parent=gene-YPIP275_RS16540;Dbxref=GenBank:WP_002211291.1;Name=WP_002211291.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906333.1;locus_tag=YPIP275_RS16540;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_002211291.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 9030 10943 . - . ID=gene-YPIP275_RS16545;Name=YPIP275_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16545;old_locus_tag=YPIP275_3762 NZ_AAOS02000018.1 Protein Homology CDS 9030 10943 . - 0 ID=cds-WP_002211292.1;Parent=gene-YPIP275_RS16545;Dbxref=GenBank:WP_002211292.1;Name=WP_002211292.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211292.1;locus_tag=YPIP275_RS16545;product=ABC transporter ATP-binding protein;protein_id=WP_002211292.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 10949 13069 . - . ID=gene-YPIP275_RS16550;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=YPIP275_RS16550;old_locus_tag=YPIP275_3763 NZ_AAOS02000018.1 Protein Homology CDS 10949 13069 . - 0 ID=cds-WP_002211293.1;Parent=gene-YPIP275_RS16550;Dbxref=GenBank:WP_002211293.1;Name=WP_002211293.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211293.1;locus_tag=YPIP275_RS16550;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_002211293.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 13169 14281 . + . ID=gene-YPIP275_RS16555;Name=YPIP275_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16555;old_locus_tag=YPIP275_3764 NZ_AAOS02000018.1 Protein Homology CDS 13169 14281 . + 0 ID=cds-WP_002211294.1;Parent=gene-YPIP275_RS16555;Dbxref=GenBank:WP_002211294.1;Name=WP_002211294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709972.1;locus_tag=YPIP275_RS16555;product=YcbX family protein;protein_id=WP_002211294.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 14307 14858 . - . ID=gene-YPIP275_RS16560;Name=YPIP275_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16560;old_locus_tag=YPIP275_3765 NZ_AAOS02000018.1 Protein Homology CDS 14307 14858 . - 0 ID=cds-WP_002211295.1;Parent=gene-YPIP275_RS16560;Dbxref=GenBank:WP_002211295.1;Name=WP_002211295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211295.1;locus_tag=YPIP275_RS16560;product=cell division protein ZapC;protein_id=WP_002211295.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 15041 16051 . - . ID=gene-YPIP275_RS16565;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=YPIP275_RS16565;old_locus_tag=YPIP275_3766 NZ_AAOS02000018.1 Protein Homology CDS 15041 16051 . - 0 ID=cds-WP_002211296.1;Parent=gene-YPIP275_RS16565;Dbxref=GenBank:WP_002211296.1;Name=WP_002211296.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015840036.1;locus_tag=YPIP275_RS16565;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_002211296.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 16678 19293 . - . ID=gene-YPIP275_RS16570;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=YPIP275_RS16570;old_locus_tag=YPIP275_3769 NZ_AAOS02000018.1 Protein Homology CDS 16678 19293 . - 0 ID=cds-WP_002211299.1;Parent=gene-YPIP275_RS16570;Dbxref=GenBank:WP_002211299.1;Name=WP_002211299.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220013.1;locus_tag=YPIP275_RS16570;product=aminopeptidase N;protein_id=WP_002211299.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 20009 21214 . + . ID=gene-YPIP275_RS16575;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=YPIP275_RS16575;old_locus_tag=YPIP275_3770 NZ_AAOS02000018.1 Protein Homology CDS 20009 21214 . + 0 ID=cds-WP_002228013.1;Parent=gene-YPIP275_RS16575;Dbxref=GenBank:WP_002228013.1;Name=WP_002228013.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816044.1;locus_tag=YPIP275_RS16575;product=nicotinate phosphoribosyltransferase;protein_id=WP_002228013.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 21713 23113 . + . ID=gene-YPIP275_RS16580;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=YPIP275_RS16580;old_locus_tag=YPIP275_3771 NZ_AAOS02000018.1 Protein Homology CDS 21713 23113 . + 0 ID=cds-WP_002211301.1;Parent=gene-YPIP275_RS16580;Dbxref=GenBank:WP_002211301.1;Name=WP_002211301.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=YPIP275_RS16580;product=asparagine--tRNA ligase;protein_id=WP_002211301.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 23414 24493 . + . ID=gene-YPIP275_RS16585;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=YPIP275_RS16585;old_locus_tag=YPIP275_3772 NZ_AAOS02000018.1 Protein Homology CDS 23414 24493 . + 0 ID=cds-WP_002354007.1;Parent=gene-YPIP275_RS16585;Dbxref=GenBank:WP_002354007.1;Name=WP_002354007.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_119863614.1;locus_tag=YPIP275_RS16585;product=porin OmpF;protein_id=WP_002354007.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 24750 25940 . + . ID=gene-YPIP275_RS16590;Name=YPIP275_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16590;old_locus_tag=YPIP275_3773 NZ_AAOS02000018.1 Protein Homology CDS 24750 25940 . + 0 ID=cds-WP_002211303.1;Parent=gene-YPIP275_RS16590;Dbxref=GenBank:WP_002211303.1;Name=WP_002211303.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=YPIP275_RS16590;product=amino acid aminotransferase;protein_id=WP_002211303.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 26094 26210 . + . ID=gene-YPIP275_RS29245;Name=YPIP275_RS29245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29245 NZ_AAOS02000018.1 Protein Homology CDS 26094 26210 . + 0 ID=cds-WP_002430096.1;Parent=gene-YPIP275_RS29245;Dbxref=GenBank:WP_002430096.1;Name=WP_002430096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430096.1;locus_tag=YPIP275_RS29245;product=hypothetical protein;protein_id=WP_002430096.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 26364 27011 . - . ID=gene-YPIP275_RS16595;Name=YPIP275_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16595;old_locus_tag=YPIP275_3774 NZ_AAOS02000018.1 Protein Homology CDS 26364 27011 . - 0 ID=cds-WP_002211304.1;Parent=gene-YPIP275_RS16595;Dbxref=GenBank:WP_002211304.1;Name=WP_002211304.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211304.1;locus_tag=YPIP275_RS16595;product=MBL fold metallo-hydrolase;protein_id=WP_002211304.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 27072 27620 . - . ID=gene-YPIP275_RS16600;Name=mepK;gbkey=Gene;gene=mepK;gene_biotype=protein_coding;locus_tag=YPIP275_RS16600;old_locus_tag=YPIP275_3775 NZ_AAOS02000018.1 Protein Homology CDS 27072 27620 . - 0 ID=cds-WP_002211305.1;Parent=gene-YPIP275_RS16600;Dbxref=GenBank:WP_002211305.1;Name=WP_002211305.1;Ontology_term=GO:0006508,GO:0009254,GO:0071555,GO:0004175,GO:0008237,GO:0046872;gbkey=CDS;gene=mepK;go_function=endopeptidase activity|0004175||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan turnover|0009254||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211305.1;locus_tag=YPIP275_RS16600;product=peptidoglycan L%2CD-endopeptidase MepK;protein_id=WP_002211305.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 27844 29700 . - . ID=gene-YPIP275_RS16605;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=YPIP275_RS16605;old_locus_tag=YPIP275_3776 NZ_AAOS02000018.1 Protein Homology CDS 27844 29700 . - 0 ID=cds-WP_002217987.1;Parent=gene-YPIP275_RS16605;Dbxref=GenBank:WP_002217987.1;Name=WP_002217987.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906337.1;locus_tag=YPIP275_RS16605;product=L%2CD-transpeptidase;protein_id=WP_002217987.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 29984 30442 . - . ID=gene-YPIP275_RS16610;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16610;old_locus_tag=YPIP275_3778 NZ_AAOS02000018.1 Protein Homology CDS 29984 30442 . - 0 ID=cds-WP_002213759.1-11;Parent=gene-YPIP275_RS16610;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS16610;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 30658 35115 . - . ID=gene-YPIP275_RS16620;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=YPIP275_RS16620;old_locus_tag=YPIP275_3779 NZ_AAOS02000018.1 Protein Homology CDS 30658 35115 . - 0 ID=cds-WP_002211308.1;Parent=gene-YPIP275_RS16620;Dbxref=GenBank:WP_002211308.1;Name=WP_002211308.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016586397.1;locus_tag=YPIP275_RS16620;product=chromosome partition protein MukB;protein_id=WP_002211308.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 35112 35840 . - . ID=gene-YPIP275_RS16625;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=YPIP275_RS16625;old_locus_tag=YPIP275_3780 NZ_AAOS02000018.1 Protein Homology CDS 35112 35840 . - 0 ID=cds-WP_002211309.1;Parent=gene-YPIP275_RS16625;Dbxref=GenBank:WP_002211309.1;Name=WP_002211309.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020438800.1;locus_tag=YPIP275_RS16625;product=chromosome partition protein MukE;protein_id=WP_002211309.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 35821 37143 . - . ID=gene-YPIP275_RS16630;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=YPIP275_RS16630;old_locus_tag=YPIP275_3781 NZ_AAOS02000018.1 Protein Homology CDS 35821 37143 . - 0 ID=cds-WP_002211310.1;Parent=gene-YPIP275_RS16630;Dbxref=GenBank:WP_002211310.1;Name=WP_002211310.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309032.1;locus_tag=YPIP275_RS16630;product=chromosome partition protein MukF;protein_id=WP_002211310.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 37140 37925 . - . ID=gene-YPIP275_RS16635;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=YPIP275_RS16635;old_locus_tag=YPIP275_3782 NZ_AAOS02000018.1 Protein Homology CDS 37140 37925 . - 0 ID=cds-WP_002211311.1;Parent=gene-YPIP275_RS16635;Dbxref=GenBank:WP_002211311.1;Name=WP_002211311.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079869.1;locus_tag=YPIP275_RS16635;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_002211311.1;transl_table=11 NZ_AAOS02000018.1 RefSeq pseudogene 38374 38503 . + . ID=gene-YPIP275_RS29250;Name=YPIP275_RS29250;end_range=38503,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29250;partial=true;pseudo=true;start_range=.,38374 NZ_AAOS02000018.1 Protein Homology CDS 38374 38503 . + 0 ID=cds-YPIP275_RS29250;Parent=gene-YPIP275_RS29250;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=38503,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713314.1;locus_tag=YPIP275_RS29250;partial=true;product=envelope biogenesis factor ElyC;pseudo=true;start_range=.,38374;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 38698 39591 . - . ID=gene-YPIP275_RS16645;Name=YPIP275_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16645;old_locus_tag=YPIP275_3784 NZ_AAOS02000018.1 Protein Homology CDS 38698 39591 . - 0 ID=cds-WP_002211313.1;Parent=gene-YPIP275_RS16645;Dbxref=GenBank:WP_002211313.1;Name=WP_002211313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713315.1;locus_tag=YPIP275_RS16645;product=YcbJ family phosphotransferase;protein_id=WP_002211313.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 39954 40706 . - . ID=gene-YPIP275_RS16650;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=YPIP275_RS16650;old_locus_tag=YPIP275_3785 NZ_AAOS02000018.1 Protein Homology CDS 39954 40706 . - 0 ID=cds-WP_002211314.1;Parent=gene-YPIP275_RS16650;Dbxref=GenBank:WP_002211314.1;Name=WP_002211314.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873757.1;locus_tag=YPIP275_RS16650;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_002211314.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 40703 40885 . - . ID=gene-YPIP275_RS16655;Name=YPIP275_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16655;old_locus_tag=YPIP275_3786 NZ_AAOS02000018.1 Protein Homology CDS 40703 40885 . - 0 ID=cds-WP_002211315.1;Parent=gene-YPIP275_RS16655;Dbxref=GenBank:WP_002211315.1;Name=WP_002211315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717378.1;locus_tag=YPIP275_RS16655;product=Trm112 family protein;protein_id=WP_002211315.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 41433 41642 . - . ID=gene-YPIP275_RS16660;Name=YPIP275_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16660;old_locus_tag=YPIP275_3788 NZ_AAOS02000018.1 Protein Homology CDS 41433 41642 . - 0 ID=cds-WP_002211317.1;Parent=gene-YPIP275_RS16660;Dbxref=GenBank:WP_002211317.1;Name=WP_002211317.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211317.1;locus_tag=YPIP275_RS16660;product=cold-shock protein;protein_id=WP_002211317.1;transl_table=11 NZ_AAOS02000018.1 RefSeq pseudogene 42361 43804 . + . ID=gene-YPIP275_RS16670;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=pseudogene;gene_synonym=ydcJ;locus_tag=YPIP275_RS16670;pseudo=true NZ_AAOS02000018.1 Protein Homology CDS 42361 43804 . + 0 ID=cds-YPIP275_RS16670;Parent=gene-YPIP275_RS16670;Note=frameshifted;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216263.1;locus_tag=YPIP275_RS16670;product=2-oxoadipate dioxygenase/decarboxylase HglS;pseudo=true;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 43812 44798 . - . ID=gene-YPIP275_RS16675;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=YPIP275_RS16675;old_locus_tag=YPIP275_3791 NZ_AAOS02000018.1 Protein Homology CDS 43812 44798 . - 0 ID=cds-WP_002211319.1;Parent=gene-YPIP275_RS16675;Dbxref=GenBank:WP_002211319.1;Name=WP_002211319.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=lipid-A 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211319.1;locus_tag=YPIP275_RS16675;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_002211319.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 44795 46543 . - . ID=gene-YPIP275_RS16680;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16680;old_locus_tag=YPIP275_3792 NZ_AAOS02000018.1 Protein Homology CDS 44795 46543 . - 0 ID=cds-WP_002211320.1;Parent=gene-YPIP275_RS16680;Dbxref=GenBank:WP_002211320.1;Name=WP_002211320.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309024.1;locus_tag=YPIP275_RS16680;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_002211320.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 46579 48870 . - . ID=gene-YPIP275_RS16685;Name=YPIP275_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16685;old_locus_tag=YPIP275_3793 NZ_AAOS02000018.1 Protein Homology CDS 46579 48870 . - 0 ID=cds-WP_002211321.1;Parent=gene-YPIP275_RS16685;Dbxref=GenBank:WP_002211321.1;Name=WP_002211321.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171805.1;locus_tag=YPIP275_RS16685;product=ComEC family protein;protein_id=WP_002211321.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 49417 49701 . - . ID=gene-YPIP275_RS16690;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=YPIP275_RS16690;old_locus_tag=YPIP275_3794 NZ_AAOS02000018.1 Protein Homology CDS 49417 49701 . - 0 ID=cds-WP_002211322.1;Parent=gene-YPIP275_RS16690;Dbxref=GenBank:WP_002211322.1;Name=WP_002211322.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309022.1;locus_tag=YPIP275_RS16690;product=integration host factor subunit beta;protein_id=WP_002211322.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 49762 51435 . - . ID=gene-YPIP275_RS16695;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16695;old_locus_tag=YPIP275_3795 NZ_AAOS02000018.1 Protein Homology CDS 49762 51435 . - 0 ID=cds-WP_002211323.1;Parent=gene-YPIP275_RS16695;Dbxref=GenBank:WP_002211323.1;Name=WP_002211323.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=YPIP275_RS16695;product=30S ribosomal protein S1;protein_id=WP_002211323.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 51609 52301 . - . ID=gene-YPIP275_RS16700;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=YPIP275_RS16700;old_locus_tag=YPIP275_3796 NZ_AAOS02000018.1 Protein Homology CDS 51609 52301 . - 0 ID=cds-WP_002211324.1;Parent=gene-YPIP275_RS16700;Dbxref=GenBank:WP_002211324.1;Name=WP_002211324.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159905.1;locus_tag=YPIP275_RS16700;product=(d)CMP kinase;protein_id=WP_002211324.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 52614 53900 . - . ID=gene-YPIP275_RS16705;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16705;old_locus_tag=YPIP275_3797 NZ_AAOS02000018.1 Protein Homology CDS 52614 53900 . - 0 ID=cds-WP_002211325.1;Parent=gene-YPIP275_RS16705;Dbxref=GenBank:WP_002211325.1;Name=WP_002211325.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016605332.1;locus_tag=YPIP275_RS16705;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_002211325.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 54063 55148 . - . ID=gene-YPIP275_RS16710;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=YPIP275_RS16710;old_locus_tag=YPIP275_3798 NZ_AAOS02000018.1 Protein Homology CDS 54063 55148 . - 0 ID=cds-WP_002211326.1;Parent=gene-YPIP275_RS16710;Dbxref=GenBank:WP_002211326.1;Name=WP_002211326.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate transaminase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710028.1;locus_tag=YPIP275_RS16710;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_002211326.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 55515 57362 . - . ID=gene-YPIP275_RS16715;Name=YPIP275_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16715;old_locus_tag=YPIP275_3799 NZ_AAOS02000018.1 Protein Homology CDS 55515 57362 . - 0 ID=cds-WP_002211327.1;Parent=gene-YPIP275_RS16715;Dbxref=GenBank:WP_002211327.1;Name=WP_002211327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413605.1;locus_tag=YPIP275_RS16715;product=YadA-like family protein;protein_id=WP_002211327.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 57383 58477 . - . ID=gene-YPIP275_RS16720;Name=YPIP275_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16720;old_locus_tag=YPIP275_3800 NZ_AAOS02000018.1 Protein Homology CDS 57383 58477 . - 0 ID=cds-WP_002211328.1;Parent=gene-YPIP275_RS16720;Dbxref=GenBank:WP_002211328.1;Name=WP_002211328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105384.1;locus_tag=YPIP275_RS16720;product=YadA-like family protein;protein_id=WP_002211328.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 58746 59783 . - . ID=gene-YPIP275_RS16725;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=YPIP275_RS16725;old_locus_tag=YPIP275_3801 NZ_AAOS02000018.1 Protein Homology CDS 58746 59783 . - 0 ID=cds-WP_002211329.1;Parent=gene-YPIP275_RS16725;Dbxref=GenBank:WP_002211329.1;Name=WP_002211329.1;Ontology_term=GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192052.1;locus_tag=YPIP275_RS16725;product=L-asparaginase 2;protein_id=WP_002211329.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 59932 61698 . + . ID=gene-YPIP275_RS16730;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=YPIP275_RS16730;old_locus_tag=YPIP275_3802 NZ_AAOS02000018.1 Protein Homology CDS 59932 61698 . + 0 ID=cds-WP_002211330.1;Parent=gene-YPIP275_RS16730;Dbxref=GenBank:WP_002211330.1;Name=WP_002211330.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083454.1;locus_tag=YPIP275_RS16730;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_002211330.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 62395 63252 . + . ID=gene-YPIP275_RS16735;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16735;old_locus_tag=YPIP275_3803 NZ_AAOS02000018.1 Protein Homology CDS 62395 63252 . + 0 ID=cds-WP_002211331.1;Parent=gene-YPIP275_RS16735;Dbxref=GenBank:WP_002211331.1;Name=WP_002211331.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211331.1;locus_tag=YPIP275_RS16735;product=formate transporter FocA;protein_id=WP_002211331.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 63308 65590 . + . ID=gene-YPIP275_RS16740;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=YPIP275_RS16740;old_locus_tag=YPIP275_3804 NZ_AAOS02000018.1 Protein Homology CDS 63308 65590 . + 0 ID=cds-WP_002211332.1;Parent=gene-YPIP275_RS16740;Dbxref=GenBank:WP_002211332.1;Name=WP_002211332.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415423.1;locus_tag=YPIP275_RS16740;product=formate C-acetyltransferase;protein_id=WP_002211332.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 65708 66382 . - . ID=gene-YPIP275_RS16745;Name=YPIP275_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16745;old_locus_tag=YPIP275_3805 NZ_AAOS02000018.1 Protein Homology CDS 65708 66382 . - 0 ID=cds-WP_002211333.1;Parent=gene-YPIP275_RS16745;Dbxref=GenBank:WP_002211333.1;Name=WP_002211333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211333.1;locus_tag=YPIP275_RS16745;product=glycosyltransferase family 25 protein;protein_id=WP_002211333.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 67369 68103 . + . ID=gene-YPIP275_RS16750;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16750;old_locus_tag=YPIP275_3806 NZ_AAOS02000018.1 Protein Homology CDS 67369 68103 . + 0 ID=cds-WP_002211334.1;Parent=gene-YPIP275_RS16750;Dbxref=GenBank:WP_002211334.1;Name=WP_002211334.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211334.1;locus_tag=YPIP275_RS16750;product=pyruvate formate lyase 1-activating protein;protein_id=WP_002211334.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 68257 69405 . - . ID=gene-YPIP275_RS16755;Name=YPIP275_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16755;old_locus_tag=YPIP275_3807 NZ_AAOS02000018.1 Protein Homology CDS 68257 69405 . - 0 ID=cds-WP_002211335.1;Parent=gene-YPIP275_RS16755;Dbxref=GenBank:WP_002211335.1;Name=WP_002211335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005171044.1;locus_tag=YPIP275_RS16755;product=MFS transporter;protein_id=WP_002211335.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 69676 70968 . - . ID=gene-YPIP275_RS16760;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=YPIP275_RS16760;old_locus_tag=YPIP275_3808 NZ_AAOS02000018.1 Protein Homology CDS 69676 70968 . - 0 ID=cds-WP_002211336.1;Parent=gene-YPIP275_RS16760;Dbxref=GenBank:WP_002211336.1;Name=WP_002211336.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006116.1;locus_tag=YPIP275_RS16760;product=serine--tRNA ligase;protein_id=WP_002211336.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 71210 72553 . - . ID=gene-YPIP275_RS16765;Name=YPIP275_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16765;old_locus_tag=YPIP275_3809 NZ_AAOS02000018.1 Protein Homology CDS 71210 72553 . - 0 ID=cds-WP_002228009.1;Parent=gene-YPIP275_RS16765;Dbxref=GenBank:WP_002228009.1;Name=WP_002228009.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226103.1;locus_tag=YPIP275_RS16765;product=replication-associated recombination protein A;protein_id=WP_002228009.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 72564 73172 . - . ID=gene-YPIP275_RS16770;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16770;old_locus_tag=YPIP275_3810 NZ_AAOS02000018.1 Protein Homology CDS 72564 73172 . - 0 ID=cds-WP_002211338.1;Parent=gene-YPIP275_RS16770;Dbxref=GenBank:WP_002211338.1;Name=WP_002211338.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211338.1;locus_tag=YPIP275_RS16770;product=outer membrane lipoprotein periplasmic chaperone LolA;protein_id=WP_002211338.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 73365 77282 . - . ID=gene-YPIP275_RS16775;Name=YPIP275_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16775;old_locus_tag=YPIP275_3811 NZ_AAOS02000018.1 Protein Homology CDS 73365 77282 . - 0 ID=cds-WP_002211339.1;Parent=gene-YPIP275_RS16775;Dbxref=GenBank:WP_002211339.1;Name=WP_002211339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016678505.1;locus_tag=YPIP275_RS16775;product=DNA translocase FtsK 4TM domain-containing protein;protein_id=WP_002211339.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 77405 77899 . - . ID=gene-YPIP275_RS16780;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=YPIP275_RS16780;old_locus_tag=YPIP275_3812 NZ_AAOS02000018.1 Protein Homology CDS 77405 77899 . - 0 ID=cds-WP_002211340.1;Parent=gene-YPIP275_RS16780;Dbxref=GenBank:WP_002211340.1;Name=WP_002211340.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459935.1;locus_tag=YPIP275_RS16780;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_002211340.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 78666 79628 . + . ID=gene-YPIP275_RS16785;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=YPIP275_RS16785;old_locus_tag=YPIP275_3813 NZ_AAOS02000018.1 Protein Homology CDS 78666 79628 . + 0 ID=cds-WP_002211341.1;Parent=gene-YPIP275_RS16785;Dbxref=GenBank:WP_002211341.1;Name=WP_002211341.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713343.1;locus_tag=YPIP275_RS16785;product=thioredoxin-disulfide reductase;protein_id=WP_002211341.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 80087 81853 . + . ID=gene-YPIP275_RS16795;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=YPIP275_RS16795;old_locus_tag=YPIP275_3815 NZ_AAOS02000018.1 Protein Homology CDS 80087 81853 . + 0 ID=cds-WP_002217690.1;Parent=gene-YPIP275_RS16795;Dbxref=GenBank:WP_002217690.1;Name=WP_002217690.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105386.1;locus_tag=YPIP275_RS16795;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_002217690.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 81856 83580 . + . ID=gene-YPIP275_RS16800;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=YPIP275_RS16800;old_locus_tag=YPIP275_3816 NZ_AAOS02000018.1 Protein Homology CDS 81856 83580 . + 0 ID=cds-WP_002211344.1;Parent=gene-YPIP275_RS16800;Dbxref=GenBank:WP_002211344.1;Name=WP_002211344.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083457.1;locus_tag=YPIP275_RS16800;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_002211344.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 83799 84509 . + . ID=gene-YPIP275_RS16805;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=YPIP275_RS16805;old_locus_tag=YPIP275_3818 NZ_AAOS02000018.1 Protein Homology CDS 83799 84509 . + 0 ID=cds-WP_002211346.1;Parent=gene-YPIP275_RS16805;Dbxref=GenBank:WP_002211346.1;Name=WP_002211346.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211346.1;locus_tag=YPIP275_RS16805;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_002211346.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 84675 84893 . + . ID=gene-YPIP275_RS16810;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16810;old_locus_tag=YPIP275_3819 NZ_AAOS02000018.1 Protein Homology CDS 84675 84893 . + 0 ID=cds-WP_002211347.1;Parent=gene-YPIP275_RS16810;Dbxref=GenBank:WP_002211347.1;Name=WP_002211347.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=YPIP275_RS16810;product=translation initiation factor IF-1;protein_id=WP_002211347.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 85265 85723 . - . ID=gene-YPIP275_RS16815;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16815;old_locus_tag=YPIP275_3820 NZ_AAOS02000018.1 Protein Homology CDS 85265 85723 . - 0 ID=cds-WP_002213759.1-12;Parent=gene-YPIP275_RS16815;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS16815;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 86016 88292 . - . ID=gene-YPIP275_RS16820;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16820;old_locus_tag=YPIP275_3821 NZ_AAOS02000018.1 Protein Homology CDS 86016 88292 . - 0 ID=cds-WP_002211348.1;Parent=gene-YPIP275_RS16820;Dbxref=GenBank:WP_002211348.1;Name=WP_002211348.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942592.1;locus_tag=YPIP275_RS16820;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_002211348.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 88318 88638 . - . ID=gene-YPIP275_RS16825;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=YPIP275_RS16825;old_locus_tag=YPIP275_3822 NZ_AAOS02000018.1 Protein Homology CDS 88318 88638 . - 0 ID=cds-WP_002211349.1;Parent=gene-YPIP275_RS16825;Dbxref=GenBank:WP_002211349.1;Name=WP_002211349.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=YPIP275_RS16825;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_002211349.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 88999 89262 . + . ID=gene-YPIP275_RS16830;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=YPIP275_RS16830;old_locus_tag=YPIP275_3823 NZ_AAOS02000018.1 Protein Homology CDS 88999 89262 . + 0 ID=cds-WP_002211350.1;Parent=gene-YPIP275_RS16830;Dbxref=GenBank:WP_002211350.1;Name=WP_002211350.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699966.1;locus_tag=YPIP275_RS16830;product=cold shock-like protein CspD;protein_id=WP_002211350.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 89543 91492 . - . ID=gene-YPIP275_RS16835;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=YPIP275_RS16835;old_locus_tag=YPIP275_3824 NZ_AAOS02000018.1 Protein Homology CDS 89543 91492 . - 0 ID=cds-WP_002211351.1;Parent=gene-YPIP275_RS16835;Dbxref=GenBank:WP_002211351.1;Name=WP_002211351.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710702.1;locus_tag=YPIP275_RS16835;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_002211351.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 91492 92604 . - . ID=gene-YPIP275_RS16840;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16840;old_locus_tag=YPIP275_3825 NZ_AAOS02000018.1 Protein Homology CDS 91492 92604 . - 0 ID=cds-WP_002216705.1;Parent=gene-YPIP275_RS16840;Dbxref=GenBank:WP_002216705.1;Name=WP_002216705.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105389.1;locus_tag=YPIP275_RS16840;product=macrolide transporter subunit MacA;protein_id=WP_002216705.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 92841 93788 . + . ID=gene-YPIP275_RS16845;Name=YPIP275_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16845;old_locus_tag=YPIP275_3828 NZ_AAOS02000018.1 Protein Homology CDS 92841 93788 . + 0 ID=cds-WP_002211355.1;Parent=gene-YPIP275_RS16845;Dbxref=GenBank:WP_002211355.1;Name=WP_002211355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211355.1;locus_tag=YPIP275_RS16845;product=VirK/YbjX family protein;protein_id=WP_002211355.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 93925 95592 . - . ID=gene-YPIP275_RS16850;Name=YPIP275_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16850;old_locus_tag=YPIP275_3829 NZ_AAOS02000018.1 Protein Homology CDS 93925 95592 . - 0 ID=cds-WP_002211356.1;Parent=gene-YPIP275_RS16850;Dbxref=GenBank:WP_002211356.1;Name=WP_002211356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171807.1;locus_tag=YPIP275_RS16850;product=ATP-dependent endonuclease;protein_id=WP_002211356.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 95945 96841 . + . ID=gene-YPIP275_RS16855;Name=YPIP275_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16855;old_locus_tag=YPIP275_3831 NZ_AAOS02000018.1 Protein Homology CDS 95945 96841 . + 0 ID=cds-WP_002211358.1;Parent=gene-YPIP275_RS16855;Dbxref=GenBank:WP_002211358.1;Name=WP_002211358.1;Ontology_term=GO:1903401,GO:0015661;gbkey=CDS;go_function=L-lysine efflux transmembrane transporter activity|0015661||IEA;go_process=L-lysine transmembrane transport|1903401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211358.1;locus_tag=YPIP275_RS16855;product=LysO family transporter;protein_id=WP_002211358.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 97043 98695 . + . ID=gene-YPIP275_RS16860;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;locus_tag=YPIP275_RS16860;old_locus_tag=YPIP275_3832 NZ_AAOS02000018.1 Protein Homology CDS 97043 98695 . + 0 ID=cds-WP_002211359.1;Parent=gene-YPIP275_RS16860;Dbxref=GenBank:WP_002211359.1;Name=WP_002211359.1;Ontology_term=GO:0016661,GO:0050418,GO:0051536,GO:0005737;gbkey=CDS;gene=hcp;go_component=cytoplasm|0005737||IEA;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,hydroxylamine reductase activity|0050418||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816026.1;locus_tag=YPIP275_RS16860;product=hydroxylamine reductase;protein_id=WP_002211359.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 98809 99831 . + . ID=gene-YPIP275_RS16865;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=YPIP275_RS16865;old_locus_tag=YPIP275_3833 NZ_AAOS02000018.1 Protein Homology CDS 98809 99831 . + 0 ID=cds-WP_002211360.1;Parent=gene-YPIP275_RS16865;Dbxref=GenBank:WP_002211360.1;Name=WP_002211360.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389605.1;locus_tag=YPIP275_RS16865;product=NADH oxidoreductase;protein_id=WP_002211360.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 99975 101696 . + . ID=gene-YPIP275_RS16870;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=YPIP275_RS16870;old_locus_tag=YPIP275_3834 NZ_AAOS02000018.1 Protein Homology CDS 99975 101696 . + 0 ID=cds-WP_002211361.1;Parent=gene-YPIP275_RS16870;Dbxref=GenBank:WP_002211361.1;Name=WP_002211361.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192046.1;locus_tag=YPIP275_RS16870;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_002211361.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 101905 102012 . + . ID=gene-YPIP275_RS29255;Name=YPIP275_RS29255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29255 NZ_AAOS02000018.1 Protein Homology CDS 101905 102012 . + 0 ID=cds-WP_012304306.1;Parent=gene-YPIP275_RS29255;Dbxref=GenBank:WP_012304306.1;Name=WP_012304306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264692.1;locus_tag=YPIP275_RS29255;product=hypothetical protein;protein_id=WP_012304306.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 102045 103064 . + . ID=gene-YPIP275_RS16875;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=YPIP275_RS16875;old_locus_tag=YPIP275_3835 NZ_AAOS02000018.1 Protein Homology CDS 102045 103064 . + 0 ID=cds-WP_002211362.1;Parent=gene-YPIP275_RS16875;Dbxref=GenBank:WP_002211362.1;Name=WP_002211362.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105391.1;locus_tag=YPIP275_RS16875;product=low-specificity L-threonine aldolase;protein_id=WP_002211362.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 103061 104551 . + . ID=gene-YPIP275_RS16880;Name=YPIP275_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16880;old_locus_tag=YPIP275_3836 NZ_AAOS02000018.1 Protein Homology CDS 103061 104551 . + 0 ID=cds-WP_002211363.1;Parent=gene-YPIP275_RS16880;Dbxref=GenBank:WP_002211363.1;Name=WP_002211363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192045.1;locus_tag=YPIP275_RS16880;product=DUF2867 domain-containing protein;protein_id=WP_002211363.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 104651 105658 . + . ID=gene-YPIP275_RS16885;Name=YPIP275_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16885;old_locus_tag=YPIP275_3837 NZ_AAOS02000018.1 Protein Homology CDS 104651 105658 . + 0 ID=cds-WP_002211364.1;Parent=gene-YPIP275_RS16885;Dbxref=GenBank:WP_002211364.1;Name=WP_002211364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211364.1;locus_tag=YPIP275_RS16885;product=3-beta-hydroxysteroid dehydrogenase;protein_id=WP_002211364.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 105755 106330 . + . ID=gene-YPIP275_RS16890;Name=YPIP275_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16890;old_locus_tag=YPIP275_3838 NZ_AAOS02000018.1 Protein Homology CDS 105755 106330 . + 0 ID=cds-WP_002211365.1;Parent=gene-YPIP275_RS16890;Dbxref=GenBank:WP_002211365.1;Name=WP_002211365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211365.1;locus_tag=YPIP275_RS16890;product=lipoprotein;protein_id=WP_002211365.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 106500 107060 . + . ID=gene-YPIP275_RS16895;Name=YPIP275_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16895;old_locus_tag=YPIP275_3839 NZ_AAOS02000018.1 Protein Homology CDS 106500 107060 . + 0 ID=cds-WP_002211366.1;Parent=gene-YPIP275_RS16895;Dbxref=GenBank:WP_002211366.1;Name=WP_002211366.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211366.1;locus_tag=YPIP275_RS16895;product=chorismate mutase;protein_id=WP_002211366.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 107355 108083 . + . ID=gene-YPIP275_RS16900;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=YPIP275_RS16900;old_locus_tag=YPIP275_3840 NZ_AAOS02000018.1 Protein Homology CDS 107355 108083 . + 0 ID=cds-WP_002228008.1;Parent=gene-YPIP275_RS16900;Dbxref=GenBank:WP_002228008.1;Name=WP_002228008.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=YPIP275_RS16900;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_002228008.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 108104 108835 . + . ID=gene-YPIP275_RS16905;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS16905;old_locus_tag=YPIP275_3841 NZ_AAOS02000018.1 Protein Homology CDS 108104 108835 . + 0 ID=cds-WP_002211368.1;Parent=gene-YPIP275_RS16905;Dbxref=GenBank:WP_002211368.1;Name=WP_002211368.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211368.1;locus_tag=YPIP275_RS16905;product=arginine ABC transporter substrate-binding protein;protein_id=WP_002211368.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 108847 109563 . + . ID=gene-YPIP275_RS16910;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS16910;old_locus_tag=YPIP275_3842 NZ_AAOS02000018.1 Protein Homology CDS 108847 109563 . + 0 ID=cds-WP_002211369.1;Parent=gene-YPIP275_RS16910;Dbxref=GenBank:WP_002211369.1;Name=WP_002211369.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906341.1;locus_tag=YPIP275_RS16910;product=arginine ABC transporter permease ArtQ;protein_id=WP_002211369.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 109563 110231 . + . ID=gene-YPIP275_RS16915;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=YPIP275_RS16915;old_locus_tag=YPIP275_3843 NZ_AAOS02000018.1 Protein Homology CDS 109563 110231 . + 0 ID=cds-WP_002211370.1;Parent=gene-YPIP275_RS16915;Dbxref=GenBank:WP_002211370.1;Name=WP_002211370.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671714.1;locus_tag=YPIP275_RS16915;product=arginine ABC transporter permease ArtM;protein_id=WP_002211370.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 110247 110396 . + . ID=gene-YPIP275_RS28855;Name=YPIP275_RS28855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28855;old_locus_tag=YPIP275_3844 NZ_AAOS02000018.1 Protein Homology CDS 110247 110396 . + 0 ID=cds-WP_002211371.1;Parent=gene-YPIP275_RS28855;Dbxref=GenBank:WP_002211371.1;Name=WP_002211371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211371.1;locus_tag=YPIP275_RS28855;product=hypothetical protein;protein_id=WP_002211371.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 110421 111266 . - . ID=gene-YPIP275_RS16925;Name=YPIP275_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16925;old_locus_tag=YPIP275_3845 NZ_AAOS02000018.1 Protein Homology CDS 110421 111266 . - 0 ID=cds-WP_002211372.1;Parent=gene-YPIP275_RS16925;Dbxref=GenBank:WP_002211372.1;Name=WP_002211372.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211372.1;locus_tag=YPIP275_RS16925;product=DMT family transporter;protein_id=WP_002211372.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 111263 112633 . - . ID=gene-YPIP275_RS16930;Name=YPIP275_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16930;old_locus_tag=YPIP275_3846 NZ_AAOS02000018.1 Protein Homology CDS 111263 112633 . - 0 ID=cds-WP_002211373.1;Parent=gene-YPIP275_RS16930;Dbxref=GenBank:WP_002211373.1;Name=WP_002211373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211373.1;locus_tag=YPIP275_RS16930;product=opine metallophore biosynthesis dehydrogenase;protein_id=WP_002211373.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 112626 113423 . - . ID=gene-YPIP275_RS16935;Name=YPIP275_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16935;old_locus_tag=YPIP275_3847 NZ_AAOS02000018.1 Protein Homology CDS 112626 113423 . - 0 ID=cds-WP_002211374.1;Parent=gene-YPIP275_RS16935;Dbxref=GenBank:WP_002211374.1;Name=WP_002211374.1;Ontology_term=GO:0030418,GO:0030410;gbkey=CDS;go_function=nicotianamine synthase activity|0030410||IEA;go_process=nicotianamine biosynthetic process|0030418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304311.1;locus_tag=YPIP275_RS16935;product=nicotianamine synthase family protein;protein_id=WP_002211374.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 113411 114196 . - . ID=gene-YPIP275_RS16940;Name=YPIP275_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16940;old_locus_tag=YPIP275_3848 NZ_AAOS02000018.1 Protein Homology CDS 113411 114196 . - 0 ID=cds-WP_002211375.1;Parent=gene-YPIP275_RS16940;Dbxref=GenBank:WP_002211375.1;Name=WP_002211375.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105395.1;locus_tag=YPIP275_RS16940;product=ABC transporter ATP-binding protein;protein_id=WP_002211375.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 114193 114669 . - . ID=gene-YPIP275_RS27630;Name=YPIP275_RS27630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27630;old_locus_tag=YPIP275_3849 NZ_AAOS02000018.1 Protein Homology CDS 114193 114669 . - 0 ID=cds-WP_002211376.1;Parent=gene-YPIP275_RS27630;Dbxref=GenBank:WP_002211376.1;Name=WP_002211376.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211376.1;locus_tag=YPIP275_RS27630;product=FecCD family ABC transporter permease;protein_id=WP_002211376.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 114630 115016 . - . ID=gene-YPIP275_RS27635;Name=YPIP275_RS27635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27635;old_locus_tag=YPIP275_3850 NZ_AAOS02000018.1 Protein Homology CDS 114630 115016 . - 0 ID=cds-WP_002231264.1;Parent=gene-YPIP275_RS27635;Dbxref=GenBank:WP_002231264.1;Name=WP_002231264.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231264.1;locus_tag=YPIP275_RS27635;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_002231264.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 115013 115249 . - . ID=gene-YPIP275_RS27640;Name=YPIP275_RS27640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27640;old_locus_tag=YPIP275_3851 NZ_AAOS02000018.1 Protein Homology CDS 115013 115249 . - 0 ID=cds-WP_002231265.1;Parent=gene-YPIP275_RS27640;Dbxref=GenBank:WP_002231265.1;Name=WP_002231265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231265.1;locus_tag=YPIP275_RS27640;product=hypothetical protein;protein_id=WP_002231265.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 115249 116340 . - . ID=gene-YPIP275_RS16950;Name=YPIP275_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16950;old_locus_tag=YPIP275_3852 NZ_AAOS02000018.1 Protein Homology CDS 115249 116340 . - 0 ID=cds-WP_002211377.1;Parent=gene-YPIP275_RS16950;Dbxref=GenBank:WP_002211377.1;Name=WP_002211377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105397.1;locus_tag=YPIP275_RS16950;product=ABC transporter substrate-binding protein;protein_id=WP_002211377.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 116752 117678 . - . ID=gene-YPIP275_RS16955;Name=YPIP275_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16955;old_locus_tag=YPIP275_3853 NZ_AAOS02000018.1 Protein Homology CDS 116752 117678 . - 0 ID=cds-WP_002211378.1;Parent=gene-YPIP275_RS16955;Dbxref=GenBank:WP_002211378.1;Name=WP_002211378.1;Ontology_term=GO:0005743,GO:0016020,GO:0035632;gbkey=CDS;go_component=mitochondrial inner membrane|0005743||IEA,membrane|0016020||IEA,mitochondrial prohibitin complex|0035632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211378.1;locus_tag=YPIP275_RS16955;product=prohibitin family protein;protein_id=WP_002211378.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 118019 118249 . - . ID=gene-YPIP275_RS16960;Name=YPIP275_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16960 NZ_AAOS02000018.1 Protein Homology CDS 118019 118249 . - 0 ID=cds-WP_002228004.1;Parent=gene-YPIP275_RS16960;Dbxref=GenBank:WP_002228004.1;Name=WP_002228004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304314.1;locus_tag=YPIP275_RS16960;product=hypothetical protein;protein_id=WP_002228004.1;transl_table=11 NZ_AAOS02000018.1 RefSeq pseudogene 118497 118958 . + . ID=gene-YPIP275_RS16970;Name=YPIP275_RS16970;end_range=118958,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS16970;old_locus_tag=YPIP275_3855;partial=true;pseudo=true NZ_AAOS02000018.1 Protein Homology CDS 118497 118958 . + 0 ID=cds-YPIP275_RS16970;Parent=gene-YPIP275_RS16970;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=118958,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220045.1;locus_tag=YPIP275_RS16970;partial=true;product=transporter substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 119025 119807 . - . ID=gene-YPIP275_RS16975;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS16975;old_locus_tag=YPIP275_3856 NZ_AAOS02000018.1 Protein Homology CDS 119025 119807 . - 0 ID=cds-WP_001317493.1-20;Parent=gene-YPIP275_RS16975;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS16975;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000018.1 RefSeq gene 119804 120826 . - . ID=gene-YPIP275_RS16980;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16980;old_locus_tag=YPIP275_3857 NZ_AAOS02000018.1 Protein Homology CDS 119804 120826 . - 0 ID=cds-WP_000255944.1-16;Parent=gene-YPIP275_RS16980;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS16980;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 ##sequence-region NZ_AAOS02000017.1 1 121687 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000017.1 RefSeq region 1 121687 . + . ID=NZ_AAOS02000017.1:1..121687;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000017.1 RefSeq gene 1 538 . + . ID=gene-YPIP275_RS15895;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=YPIP275_RS15895;old_locus_tag=YPIP275_0612;partial=true;start_range=.,1 NZ_AAOS02000017.1 Protein Homology CDS 1 538 . + 1 ID=cds-WP_002211178.1;Parent=gene-YPIP275_RS15895;Dbxref=GenBank:WP_002211178.1;Name=WP_002211178.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083202.1;locus_tag=YPIP275_RS15895;partial=true;product=septum site-determining protein MinC;protein_id=WP_002211178.1;start_range=.,1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 563 1375 . + . ID=gene-YPIP275_RS15900;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=YPIP275_RS15900;old_locus_tag=YPIP275_0613 NZ_AAOS02000017.1 Protein Homology CDS 563 1375 . + 0 ID=cds-WP_002211179.1;Parent=gene-YPIP275_RS15900;Dbxref=GenBank:WP_002211179.1;Name=WP_002211179.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=YPIP275_RS15900;product=septum site-determining protein MinD;protein_id=WP_002211179.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 1379 1648 . + . ID=gene-YPIP275_RS15905;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=YPIP275_RS15905;old_locus_tag=YPIP275_0614 NZ_AAOS02000017.1 Protein Homology CDS 1379 1648 . + 0 ID=cds-WP_002211180.1;Parent=gene-YPIP275_RS15905;Dbxref=GenBank:WP_002211180.1;Name=WP_002211180.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015840174.1;locus_tag=YPIP275_RS15905;product=cell division topological specificity factor MinE;protein_id=WP_002211180.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 1885 3006 . - . ID=gene-YPIP275_RS15910;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=YPIP275_RS15910;old_locus_tag=YPIP275_0615 NZ_AAOS02000017.1 Protein Homology CDS 1885 3006 . - 0 ID=cds-WP_002211181.1;Parent=gene-YPIP275_RS15910;Dbxref=GenBank:WP_002211181.1;Name=WP_002211181.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211181.1;locus_tag=YPIP275_RS15910;product=ribonuclease D;protein_id=WP_002211181.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 3166 4854 . - . ID=gene-YPIP275_RS15915;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=YPIP275_RS15915;old_locus_tag=YPIP275_0616 NZ_AAOS02000017.1 Protein Homology CDS 3166 4854 . - 0 ID=cds-WP_002211182.1;Parent=gene-YPIP275_RS15915;Dbxref=GenBank:WP_002211182.1;Name=WP_002211182.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220632.1;locus_tag=YPIP275_RS15915;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_002211182.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 5389 5496 . + . ID=gene-YPIP275_RS28810;Name=YPIP275_RS28810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28810 NZ_AAOS02000017.1 Protein Homology CDS 5389 5496 . + 0 ID=cds-WP_087768167.1;Parent=gene-YPIP275_RS28810;Dbxref=GenBank:WP_087768167.1;Name=WP_087768167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=YPIP275_RS28810;product=gluconate 5-dehydrogenase;protein_id=WP_087768167.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 5497 6102 . - . ID=gene-YPIP275_RS15920;Name=YPIP275_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15920;old_locus_tag=YPIP275_0617 NZ_AAOS02000017.1 Protein Homology CDS 5497 6102 . - 0 ID=cds-WP_002211183.1;Parent=gene-YPIP275_RS15920;Dbxref=GenBank:WP_002211183.1;Name=WP_002211183.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211183.1;locus_tag=YPIP275_RS15920;product=Slp family lipoprotein;protein_id=WP_002211183.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 6239 6937 . - . ID=gene-YPIP275_RS15925;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=YPIP275_RS15925;old_locus_tag=YPIP275_0618 NZ_AAOS02000017.1 Protein Homology CDS 6239 6937 . - 0 ID=cds-WP_002211184.1;Parent=gene-YPIP275_RS15925;Dbxref=GenBank:WP_002211184.1;Name=WP_002211184.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816515.1;locus_tag=YPIP275_RS15925;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_002211184.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 7009 8913 . - . ID=gene-YPIP275_RS15930;Name=yoaA;gbkey=Gene;gene=yoaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS15930;old_locus_tag=YPIP275_0619 NZ_AAOS02000017.1 Protein Homology CDS 7009 8913 . - 0 ID=cds-WP_002211185.1;Parent=gene-YPIP275_RS15930;Dbxref=GenBank:WP_002211185.1;Name=WP_002211185.1;Ontology_term=GO:0006281;gbkey=CDS;gene=yoaA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211185.1;locus_tag=YPIP275_RS15930;product=DNA repair helicase YoaA;protein_id=WP_002211185.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 9044 9388 . + . ID=gene-YPIP275_RS15935;Name=YPIP275_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15935;old_locus_tag=YPIP275_0620 NZ_AAOS02000017.1 Protein Homology CDS 9044 9388 . + 0 ID=cds-WP_002211186.1;Parent=gene-YPIP275_RS15935;Dbxref=GenBank:WP_002211186.1;Name=WP_002211186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169202.1;locus_tag=YPIP275_RS15935;product=RidA family protein;protein_id=WP_002211186.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 9520 9849 . - . ID=gene-YPIP275_RS15940;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=YPIP275_RS15940;old_locus_tag=YPIP275_0621 NZ_AAOS02000017.1 Protein Homology CDS 9520 9849 . - 0 ID=cds-WP_002211187.1;Parent=gene-YPIP275_RS15940;Dbxref=GenBank:WP_002211187.1;Name=WP_002211187.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163022.1;locus_tag=YPIP275_RS15940;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_002211187.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 9836 10279 . - . ID=gene-YPIP275_RS15945;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS15945;old_locus_tag=YPIP275_0622 NZ_AAOS02000017.1 Protein Homology CDS 9836 10279 . - 0 ID=cds-WP_002211188.1;Parent=gene-YPIP275_RS15945;Dbxref=GenBank:WP_002211188.1;Name=WP_002211188.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452797.1;locus_tag=YPIP275_RS15945;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_002211188.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 10994 11635 . - . ID=gene-YPIP275_RS15950;Name=YPIP275_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15950;old_locus_tag=YPIP275_0624 NZ_AAOS02000017.1 Protein Homology CDS 10994 11635 . - 0 ID=cds-WP_002211190.1;Parent=gene-YPIP275_RS15950;Dbxref=GenBank:WP_002211190.1;Name=WP_002211190.1;Ontology_term=GO:0016829,GO:0016830,GO:0016832,GO:0016833;gbkey=CDS;go_function=lyase activity|0016829||IEA,carbon-carbon lyase activity|0016830||IEA,aldehyde-lyase activity|0016832||IEA,oxo-acid-lyase activity|0016833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211190.1;locus_tag=YPIP275_RS15950;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_002211190.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 11877 13361 . - . ID=gene-YPIP275_RS15955;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=YPIP275_RS15955;old_locus_tag=YPIP275_0625 NZ_AAOS02000017.1 Protein Homology CDS 11877 13361 . - 0 ID=cds-WP_002211191.1;Parent=gene-YPIP275_RS15955;Dbxref=GenBank:WP_002211191.1;Name=WP_002211191.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906215.1;locus_tag=YPIP275_RS15955;product=glucose-6-phosphate dehydrogenase;protein_id=WP_002211191.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 13714 14583 . + . ID=gene-YPIP275_RS15960;Name=YPIP275_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15960;old_locus_tag=YPIP275_0626 NZ_AAOS02000017.1 Protein Homology CDS 13714 14583 . + 0 ID=cds-WP_002211192.1;Parent=gene-YPIP275_RS15960;Dbxref=GenBank:WP_002211192.1;Name=WP_002211192.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211192.1;locus_tag=YPIP275_RS15960;product=MurR/RpiR family transcriptional regulator;protein_id=WP_002211192.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 14913 16355 . + . ID=gene-YPIP275_RS15965;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=YPIP275_RS15965;old_locus_tag=YPIP275_0627 NZ_AAOS02000017.1 Protein Homology CDS 14913 16355 . + 0 ID=cds-WP_002211193.1;Parent=gene-YPIP275_RS15965;Dbxref=GenBank:WP_002211193.1;Name=WP_002211193.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=YPIP275_RS15965;product=pyruvate kinase;protein_id=WP_002211193.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 16506 17468 . - . ID=gene-YPIP275_RS15970;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=YPIP275_RS15970;old_locus_tag=YPIP275_0628 NZ_AAOS02000017.1 Protein Homology CDS 16506 17468 . - 0 ID=cds-WP_002211194.1;Parent=gene-YPIP275_RS15970;Dbxref=GenBank:WP_002211194.1;Name=WP_002211194.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874187.1;locus_tag=YPIP275_RS15970;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_002211194.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 17735 19051 . - . ID=gene-YPIP275_RS15975;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=YPIP275_RS15975;old_locus_tag=YPIP275_0629 NZ_AAOS02000017.1 Protein Homology CDS 17735 19051 . - 0 ID=cds-WP_002228437.1;Parent=gene-YPIP275_RS15975;Dbxref=GenBank:WP_002228437.1;Name=WP_002228437.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228437.1;locus_tag=YPIP275_RS15975;product=murein DD-endopeptidase MepM;protein_id=WP_002228437.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 19072 20028 . - . ID=gene-YPIP275_RS15980;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=YPIP275_RS15980;old_locus_tag=YPIP275_0630 NZ_AAOS02000017.1 Protein Homology CDS 19072 20028 . - 0 ID=cds-WP_002227944.1;Parent=gene-YPIP275_RS15980;Dbxref=GenBank:WP_002227944.1;Name=WP_002227944.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304106.1;locus_tag=YPIP275_RS15980;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_002227944.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 20104 20862 . + . ID=gene-YPIP275_RS15985;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=YPIP275_RS15985;old_locus_tag=YPIP275_0631 NZ_AAOS02000017.1 Protein Homology CDS 20104 20862 . + 0 ID=cds-WP_002228434.1;Parent=gene-YPIP275_RS15985;Dbxref=GenBank:WP_002228434.1;Name=WP_002228434.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094033.1;locus_tag=YPIP275_RS15985;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_002228434.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 20859 21644 . + . ID=gene-YPIP275_RS15990;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=YPIP275_RS15990;old_locus_tag=YPIP275_0632 NZ_AAOS02000017.1 Protein Homology CDS 20859 21644 . + 0 ID=cds-WP_002211197.1;Parent=gene-YPIP275_RS15990;Dbxref=GenBank:WP_002211197.1;Name=WP_002211197.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169187.1;locus_tag=YPIP275_RS15990;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_002211197.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 21699 22703 . - . ID=gene-YPIP275_RS15995;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=YPIP275_RS15995;old_locus_tag=YPIP275_0633 NZ_AAOS02000017.1 Protein Homology CDS 21699 22703 . - 0 ID=cds-WP_002211198.1;Parent=gene-YPIP275_RS15995;Dbxref=GenBank:WP_002211198.1;Name=WP_002211198.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715228.1;locus_tag=YPIP275_RS15995;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_002211198.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 22865 23479 . - . ID=gene-YPIP275_RS16000;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16000;old_locus_tag=YPIP275_0634 NZ_AAOS02000017.1 Protein Homology CDS 22865 23479 . - 0 ID=cds-WP_002211199.1;Parent=gene-YPIP275_RS16000;Dbxref=GenBank:WP_002211199.1;Name=WP_002211199.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006709047.1;locus_tag=YPIP275_RS16000;product=Holliday junction branch migration protein RuvA;protein_id=WP_002211199.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 23559 23717 . - . ID=gene-YPIP275_RS27560;Name=YPIP275_RS27560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27560;old_locus_tag=YPIP275_0635 NZ_AAOS02000017.1 Protein Homology CDS 23559 23717 . - 0 ID=cds-WP_308417124.1;Parent=gene-YPIP275_RS27560;Dbxref=GenBank:WP_308417124.1;Name=WP_308417124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220636.1;locus_tag=YPIP275_RS27560;product=tat protein;protein_id=WP_308417124.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 23762 24283 . - . ID=gene-YPIP275_RS16005;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=YPIP275_RS16005;old_locus_tag=YPIP275_0636 NZ_AAOS02000017.1 Protein Homology CDS 23762 24283 . - 0 ID=cds-WP_002211201.1;Parent=gene-YPIP275_RS16005;Dbxref=GenBank:WP_002211201.1;Name=WP_002211201.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005185237.1;locus_tag=YPIP275_RS16005;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_002211201.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 24492 25235 . - . ID=gene-YPIP275_RS16010;Name=YPIP275_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16010;old_locus_tag=YPIP275_0637 NZ_AAOS02000017.1 Protein Homology CDS 24492 25235 . - 0 ID=cds-WP_002211202.1;Parent=gene-YPIP275_RS16010;Dbxref=GenBank:WP_002211202.1;Name=WP_002211202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227699.1;locus_tag=YPIP275_RS16010;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_002211202.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 25293 25736 . - . ID=gene-YPIP275_RS16015;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=YPIP275_RS16015;old_locus_tag=YPIP275_0638 NZ_AAOS02000017.1 Protein Homology CDS 25293 25736 . - 0 ID=cds-WP_002211203.1;Parent=gene-YPIP275_RS16015;Dbxref=GenBank:WP_002211203.1;Name=WP_002211203.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211203.1;locus_tag=YPIP275_RS16015;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_002211203.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 25736 27532 . - . ID=gene-YPIP275_RS16020;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=YPIP275_RS16020;old_locus_tag=YPIP275_0639 NZ_AAOS02000017.1 Protein Homology CDS 25736 27532 . - 0 ID=cds-WP_002211204.1;Parent=gene-YPIP275_RS16020;Dbxref=GenBank:WP_002211204.1;Name=WP_002211204.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874178.1;locus_tag=YPIP275_RS16020;product=aspartate--tRNA ligase;protein_id=WP_002211204.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 28590 29405 . + . ID=gene-YPIP275_RS16025;Name=YPIP275_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16025;old_locus_tag=YPIP275_0640 NZ_AAOS02000017.1 Protein Homology CDS 28590 29405 . + 0 ID=cds-WP_002211205.1;Parent=gene-YPIP275_RS16025;Dbxref=GenBank:WP_002211205.1;Name=WP_002211205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105129.1;locus_tag=YPIP275_RS16025;product=DUF72 domain-containing protein;protein_id=WP_002211205.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 29585 29980 . + . ID=gene-YPIP275_RS16030;Name=YPIP275_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16030;old_locus_tag=YPIP275_0641 NZ_AAOS02000017.1 Protein Homology CDS 29585 29980 . + 0 ID=cds-WP_002211206.1;Parent=gene-YPIP275_RS16030;Dbxref=GenBank:WP_002211206.1;Name=WP_002211206.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169168.1;locus_tag=YPIP275_RS16030;product=MAPEG family protein;protein_id=WP_002211206.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 30171 30974 . + . ID=gene-YPIP275_RS16035;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16035;old_locus_tag=YPIP275_0642 NZ_AAOS02000017.1 Protein Homology CDS 30171 30974 . + 0 ID=cds-WP_002211207.1;Parent=gene-YPIP275_RS16035;Dbxref=GenBank:WP_002211207.1;Name=WP_002211207.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211207.1;locus_tag=YPIP275_RS16035;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_002211207.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 30971 31942 . + . ID=gene-YPIP275_RS16040;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=YPIP275_RS16040;old_locus_tag=YPIP275_0643 NZ_AAOS02000017.1 Protein Homology CDS 30971 31942 . + 0 ID=cds-WP_002211208.1;Parent=gene-YPIP275_RS16040;Dbxref=GenBank:WP_002211208.1;Name=WP_002211208.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945559.1;locus_tag=YPIP275_RS16040;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_002211208.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 32135 32899 . - . ID=gene-YPIP275_RS16045;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=YPIP275_RS16045;old_locus_tag=YPIP275_0644 NZ_AAOS02000017.1 Protein Homology CDS 32135 32899 . - 0 ID=cds-WP_002211209.1;Parent=gene-YPIP275_RS16045;Dbxref=GenBank:WP_002211209.1;Name=WP_002211209.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211209.1;locus_tag=YPIP275_RS16045;product=copper homeostasis protein CutC;protein_id=WP_002211209.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 33131 33706 . - . ID=gene-YPIP275_RS16050;Name=YPIP275_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16050;old_locus_tag=YPIP275_0645 NZ_AAOS02000017.1 Protein Homology CDS 33131 33706 . - 0 ID=cds-WP_002211210.1;Parent=gene-YPIP275_RS16050;Dbxref=GenBank:WP_002211210.1;Name=WP_002211210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211210.1;locus_tag=YPIP275_RS16050;product=VOC family protein;protein_id=WP_002211210.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 34333 36063 . + . ID=gene-YPIP275_RS16055;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=YPIP275_RS16055;old_locus_tag=YPIP275_0647 NZ_AAOS02000017.1 Protein Homology CDS 34333 36063 . + 0 ID=cds-WP_002211212.1;Parent=gene-YPIP275_RS16055;Dbxref=GenBank:WP_002211212.1;Name=WP_002211212.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416390.1;locus_tag=YPIP275_RS16055;product=arginine--tRNA ligase;protein_id=WP_002211212.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 36294 39365 . - . ID=gene-YPIP275_RS16060;Name=YPIP275_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16060 NZ_AAOS02000017.1 Protein Homology CDS 36294 39365 . - 0 ID=cds-WP_235440705.1;Parent=gene-YPIP275_RS16060;Dbxref=GenBank:WP_235440705.1;Name=WP_235440705.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.7;locus_tag=YPIP275_RS16060;product=beta strand repeat-containing protein;protein_id=WP_235440705.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 39329 41023 . - . ID=gene-YPIP275_RS28815;Name=YPIP275_RS28815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28815 NZ_AAOS02000017.1 Protein Homology CDS 39329 41023 . - 0 ID=cds-WP_227002849.1;Parent=gene-YPIP275_RS28815;Dbxref=GenBank:WP_227002849.1;Name=WP_227002849.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.7;locus_tag=YPIP275_RS28815;product=two-partner secretion domain-containing protein;protein_id=WP_227002849.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 41053 42714 . - . ID=gene-YPIP275_RS16065;Name=YPIP275_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16065;old_locus_tag=YPIP275_0649 NZ_AAOS02000017.1 Protein Homology CDS 41053 42714 . - 0 ID=cds-WP_002211213.1;Parent=gene-YPIP275_RS16065;Dbxref=GenBank:WP_002211213.1;Name=WP_002211213.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211213.1;locus_tag=YPIP275_RS16065;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_002211213.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 43154 44689 . - . ID=gene-YPIP275_RS16070;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS16070;old_locus_tag=YPIP275_0650 NZ_AAOS02000017.1 Protein Homology CDS 43154 44689 . - 0 ID=cds-WP_002211214.1;Parent=gene-YPIP275_RS16070;Dbxref=GenBank:WP_002211214.1;Name=WP_002211214.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105136.1;locus_tag=YPIP275_RS16070;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_002211214.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 44956 45867 . - . ID=gene-YPIP275_RS28820;Name=YPIP275_RS28820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28820 NZ_AAOS02000017.1 Protein Homology CDS 44956 45867 . - 0 ID=cds-WP_002354211.1;Parent=gene-YPIP275_RS28820;Dbxref=GenBank:WP_002354211.1;Name=WP_002354211.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192404.1;locus_tag=YPIP275_RS28820;product=Gfo/Idh/MocA family protein;protein_id=WP_002354211.1;transl_table=11 NZ_AAOS02000017.1 RefSeq pseudogene 45928 46566 . - . ID=gene-YPIP275_RS28825;Name=YPIP275_RS28825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28825;partial=true;pseudo=true;start_range=.,45928 NZ_AAOS02000017.1 Protein Homology CDS 45928 46566 . - 0 ID=cds-YPIP275_RS28825;Parent=gene-YPIP275_RS28825;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF008413.0;locus_tag=YPIP275_RS28825;partial=true;product=DUF480 domain-containing protein;pseudo=true;start_range=.,45928;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 46574 47158 . - . ID=gene-YPIP275_RS16080;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS16080;old_locus_tag=YPIP275_0652 NZ_AAOS02000017.1 Protein Homology CDS 46574 47158 . - 0 ID=cds-WP_002211216.1;Parent=gene-YPIP275_RS16080;Dbxref=GenBank:WP_002211216.1;Name=WP_002211216.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211216.1;locus_tag=YPIP275_RS16080;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_002211216.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 47452 48657 . + . ID=gene-YPIP275_RS16085;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=YPIP275_RS16085;old_locus_tag=YPIP275_0653 NZ_AAOS02000017.1 Protein Homology CDS 47452 48657 . + 0 ID=cds-WP_002211217.1;Parent=gene-YPIP275_RS16085;Dbxref=GenBank:WP_002211217.1;Name=WP_002211217.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211217.1;locus_tag=YPIP275_RS16085;product=multidrug efflux MFS transporter MdtH;protein_id=WP_002211217.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 49052 49615 . + . ID=gene-YPIP275_RS16090;Name=YPIP275_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16090;old_locus_tag=YPIP275_0654 NZ_AAOS02000017.1 Protein Homology CDS 49052 49615 . + 0 ID=cds-WP_002211218.1;Parent=gene-YPIP275_RS16090;Dbxref=GenBank:WP_002211218.1;Name=WP_002211218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229689.1;locus_tag=YPIP275_RS16090;product=lipoprotein;protein_id=WP_002211218.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 50069 50629 . - . ID=gene-YPIP275_RS16095;Name=YPIP275_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16095;old_locus_tag=YPIP275_0656 NZ_AAOS02000017.1 Protein Homology CDS 50069 50629 . - 0 ID=cds-WP_002211220.1;Parent=gene-YPIP275_RS16095;Dbxref=GenBank:WP_002211220.1;Name=WP_002211220.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211220.1;locus_tag=YPIP275_RS16095;product=TorD/DmsD family molecular chaperone;protein_id=WP_002211220.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 50666 51403 . - . ID=gene-YPIP275_RS16100;Name=YPIP275_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16100;old_locus_tag=YPIP275_0657 NZ_AAOS02000017.1 Protein Homology CDS 50666 51403 . - 0 ID=cds-WP_002211221.1;Parent=gene-YPIP275_RS16100;Dbxref=GenBank:WP_002211221.1;Name=WP_002211221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006358.1;locus_tag=YPIP275_RS16100;product=phosphatase;protein_id=WP_002211221.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 51692 51781 . + . ID=gene-YPIP275_RS16105;Name=YPIP275_RS16105;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS16105;old_locus_tag=YPIP275_0658 NZ_AAOS02000017.1 tRNAscan-SE tRNA 51692 51781 . + . ID=rna-YPIP275_RS16105;Parent=gene-YPIP275_RS16105;anticodon=(pos:51726..51728);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS16105;product=tRNA-Ser NZ_AAOS02000017.1 tRNAscan-SE exon 51692 51781 . + . ID=exon-YPIP275_RS16105-1;Parent=rna-YPIP275_RS16105;anticodon=(pos:51726..51728);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS16105;product=tRNA-Ser NZ_AAOS02000017.1 RefSeq gene 52038 53150 . - . ID=gene-YPIP275_RS16110;Name=YPIP275_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16110;old_locus_tag=YPIP275_0659 NZ_AAOS02000017.1 Protein Homology CDS 52038 53150 . - 0 ID=cds-WP_002211222.1;Parent=gene-YPIP275_RS16110;Dbxref=GenBank:WP_002211222.1;Name=WP_002211222.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211222.1;locus_tag=YPIP275_RS16110;product=ROK family transcriptional regulator;protein_id=WP_002211222.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 53164 53994 . - . ID=gene-YPIP275_RS16115;Name=YPIP275_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16115;old_locus_tag=YPIP275_0660 NZ_AAOS02000017.1 Protein Homology CDS 53164 53994 . - 0 ID=cds-WP_002211223.1;Parent=gene-YPIP275_RS16115;Dbxref=GenBank:WP_002211223.1;Name=WP_002211223.1;Ontology_term=GO:0006629,GO:0008081,GO:0046872;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211223.1;locus_tag=YPIP275_RS16115;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002211223.1;transl_table=11 NZ_AAOS02000017.1 RefSeq pseudogene 54210 54521 . + . ID=gene-YPIP275_RS16120;Name=YPIP275_RS16120;end_range=54521,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS16120;old_locus_tag=YPIP275_0661;partial=true;pseudo=true NZ_AAOS02000017.1 Protein Homology CDS 54210 54521 . + 0 ID=cds-YPIP275_RS16120;Parent=gene-YPIP275_RS16120;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;end_range=54521,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683639.1;locus_tag=YPIP275_RS16120;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 54624 55082 . - . ID=gene-YPIP275_RS16125;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16125;old_locus_tag=YPIP275_0662 NZ_AAOS02000017.1 Protein Homology CDS 54624 55082 . - 0 ID=cds-WP_002213759.1-13;Parent=gene-YPIP275_RS16125;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS16125;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000017.1 RefSeq pseudogene 55226 55987 . + . ID=gene-YPIP275_RS16130;Name=YPIP275_RS16130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS16130;old_locus_tag=YPIP275_0663;partial=true;pseudo=true;start_range=.,55226 NZ_AAOS02000017.1 Protein Homology CDS 55226 55987 . + 0 ID=cds-YPIP275_RS16130;Parent=gene-YPIP275_RS16130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683639.1;locus_tag=YPIP275_RS16130;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;start_range=.,55226;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 55984 56850 . + . ID=gene-YPIP275_RS16135;Name=YPIP275_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16135;old_locus_tag=YPIP275_0664 NZ_AAOS02000017.1 Protein Homology CDS 55984 56850 . + 0 ID=cds-WP_002211226.1;Parent=gene-YPIP275_RS16135;Dbxref=GenBank:WP_002211226.1;Name=WP_002211226.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304116.1;locus_tag=YPIP275_RS16135;product=ABC transporter permease;protein_id=WP_002211226.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 56847 57683 . + . ID=gene-YPIP275_RS16140;Name=YPIP275_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16140;old_locus_tag=YPIP275_0665 NZ_AAOS02000017.1 Protein Homology CDS 56847 57683 . + 0 ID=cds-WP_002211227.1;Parent=gene-YPIP275_RS16140;Dbxref=GenBank:WP_002211227.1;Name=WP_002211227.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211227.1;locus_tag=YPIP275_RS16140;product=ABC transporter permease;protein_id=WP_002211227.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 57703 58785 . + . ID=gene-YPIP275_RS16145;Name=YPIP275_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16145;old_locus_tag=YPIP275_0666 NZ_AAOS02000017.1 Protein Homology CDS 57703 58785 . + 0 ID=cds-WP_002211228.1;Parent=gene-YPIP275_RS16145;Dbxref=GenBank:WP_002211228.1;Name=WP_002211228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304117.1;locus_tag=YPIP275_RS16145;product=ABC transporter substrate-binding protein;protein_id=WP_002211228.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 59086 59961 . + . ID=gene-YPIP275_RS16150;Name=YPIP275_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16150;old_locus_tag=YPIP275_0667 NZ_AAOS02000017.1 Protein Homology CDS 59086 59961 . + 0 ID=cds-WP_002211229.1;Parent=gene-YPIP275_RS16150;Dbxref=GenBank:WP_002211229.1;Name=WP_002211229.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211229.1;locus_tag=YPIP275_RS16150;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_002211229.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 60103 60192 . + . ID=gene-YPIP275_RS16155;Name=YPIP275_RS16155;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS16155;old_locus_tag=YPIP275_0668 NZ_AAOS02000017.1 tRNAscan-SE tRNA 60103 60192 . + . ID=rna-YPIP275_RS16155;Parent=gene-YPIP275_RS16155;anticodon=(pos:60137..60139);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS16155;product=tRNA-Ser NZ_AAOS02000017.1 tRNAscan-SE exon 60103 60192 . + . ID=exon-YPIP275_RS16155-1;Parent=rna-YPIP275_RS16155;anticodon=(pos:60137..60139);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS16155;product=tRNA-Ser NZ_AAOS02000017.1 RefSeq pseudogene 61028 62299 . + . ID=gene-YPIP275_RS16165;Name=dauA;end_range=62299,.;gbkey=Gene;gene=dauA;gene_biotype=pseudogene;locus_tag=YPIP275_RS16165;old_locus_tag=YPIP275_0669;partial=true;pseudo=true NZ_AAOS02000017.1 Protein Homology CDS 61028 62299 . + 0 ID=cds-YPIP275_RS16165;Parent=gene-YPIP275_RS16165;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=62299,.;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229694.1;locus_tag=YPIP275_RS16165;partial=true;product=C4-dicarboxylic acid transporter DauA;pseudo=true;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 62387 63409 . + . ID=gene-YPIP275_RS16170;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16170;old_locus_tag=YPIP275_0670 NZ_AAOS02000017.1 Protein Homology CDS 62387 63409 . + 0 ID=cds-WP_000255944.1-17;Parent=gene-YPIP275_RS16170;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS16170;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 63406 64188 . + . ID=gene-YPIP275_RS16175;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS16175;old_locus_tag=YPIP275_0671 NZ_AAOS02000017.1 Protein Homology CDS 63406 64188 . + 0 ID=cds-WP_001317493.1-21;Parent=gene-YPIP275_RS16175;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS16175;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000017.1 RefSeq pseudogene 64256 64684 . + . ID=gene-YPIP275_RS16180;Name=YPIP275_RS16180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS16180;old_locus_tag=YPIP275_0673;partial=true;pseudo=true;start_range=.,64256 NZ_AAOS02000017.1 Protein Homology CDS 64256 64684 . + 0 ID=cds-YPIP275_RS16180;Parent=gene-YPIP275_RS16180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229694.1;locus_tag=YPIP275_RS16180;partial=true;product=STAS domain-containing protein;pseudo=true;start_range=.,64256;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 64808 65266 . - . ID=gene-YPIP275_RS16185;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16185;old_locus_tag=YPIP275_0674 NZ_AAOS02000017.1 Protein Homology CDS 64808 65266 . - 0 ID=cds-WP_002213775.1-18;Parent=gene-YPIP275_RS16185;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS16185;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 65748 66602 . - . ID=gene-YPIP275_RS16190;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16190;old_locus_tag=YPIP275_0675 NZ_AAOS02000017.1 Protein Homology CDS 65748 66602 . - 0 ID=cds-WP_002211232.1;Parent=gene-YPIP275_RS16190;Dbxref=GenBank:WP_002211232.1;Name=WP_002211232.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227529.1;locus_tag=YPIP275_RS16190;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_002211232.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 66698 67507 . - . ID=gene-YPIP275_RS16195;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=YPIP275_RS16195;old_locus_tag=YPIP275_0676 NZ_AAOS02000017.1 Protein Homology CDS 66698 67507 . - 0 ID=cds-WP_002211233.1;Parent=gene-YPIP275_RS16195;Dbxref=GenBank:WP_002211233.1;Name=WP_002211233.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256500.1;locus_tag=YPIP275_RS16195;product=invasion regulator SirB1;protein_id=WP_002211233.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 67504 67905 . - . ID=gene-YPIP275_RS16200;Name=YPIP275_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16200;old_locus_tag=YPIP275_0677 NZ_AAOS02000017.1 Protein Homology CDS 67504 67905 . - 0 ID=cds-WP_002211234.1;Parent=gene-YPIP275_RS16200;Dbxref=GenBank:WP_002211234.1;Name=WP_002211234.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169111.1;locus_tag=YPIP275_RS16200;product=SirB2 family protein;protein_id=WP_002211234.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 67969 68799 . - . ID=gene-YPIP275_RS16205;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;gene_synonym=hemK;locus_tag=YPIP275_RS16205;old_locus_tag=YPIP275_0678 NZ_AAOS02000017.1 Protein Homology CDS 67969 68799 . - 0 ID=cds-WP_002211235.1;Parent=gene-YPIP275_RS16205;Dbxref=GenBank:WP_002211235.1;Name=WP_002211235.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211235.1;locus_tag=YPIP275_RS16205;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_002211235.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 68799 69881 . - . ID=gene-YPIP275_RS16210;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16210;old_locus_tag=YPIP275_0679 NZ_AAOS02000017.1 Protein Homology CDS 68799 69881 . - 0 ID=cds-WP_002211236.1;Parent=gene-YPIP275_RS16210;Dbxref=GenBank:WP_002211236.1;Name=WP_002211236.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309743.1;locus_tag=YPIP275_RS16210;product=peptide chain release factor 1;protein_id=WP_002211236.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 69914 71176 . - . ID=gene-YPIP275_RS16215;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=YPIP275_RS16215;old_locus_tag=YPIP275_0680 NZ_AAOS02000017.1 Protein Homology CDS 69914 71176 . - 0 ID=cds-WP_002211237.1;Parent=gene-YPIP275_RS16215;Dbxref=GenBank:WP_002211237.1;Name=WP_002211237.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006413.1;locus_tag=YPIP275_RS16215;product=glutamyl-tRNA reductase;protein_id=WP_002211237.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 71482 72105 . + . ID=gene-YPIP275_RS16220;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=YPIP275_RS16220;old_locus_tag=YPIP275_0681 NZ_AAOS02000017.1 Protein Homology CDS 71482 72105 . + 0 ID=cds-WP_002224468.1;Parent=gene-YPIP275_RS16220;Dbxref=GenBank:WP_002224468.1;Name=WP_002224468.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583171.1;locus_tag=YPIP275_RS16220;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_002224468.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 72107 73006 . + . ID=gene-YPIP275_RS16225;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=YPIP275_RS16225;old_locus_tag=YPIP275_0682 NZ_AAOS02000017.1 Protein Homology CDS 72107 73006 . + 0 ID=cds-WP_002211239.1;Parent=gene-YPIP275_RS16225;Dbxref=GenBank:WP_002211239.1;Name=WP_002211239.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211239.1;locus_tag=YPIP275_RS16225;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_002211239.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 73347 74294 . + . ID=gene-YPIP275_RS16235;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=YPIP275_RS16235;old_locus_tag=YPIP275_0683 NZ_AAOS02000017.1 Protein Homology CDS 73347 74294 . + 0 ID=cds-WP_002211240.1;Parent=gene-YPIP275_RS16235;Dbxref=GenBank:WP_002211240.1;Name=WP_002211240.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=YPIP275_RS16235;product=ribose-phosphate diphosphokinase;protein_id=WP_002211240.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 74496 74768 . - . ID=gene-YPIP275_RS16245;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=YPIP275_RS16245;old_locus_tag=YPIP275_0684 NZ_AAOS02000017.1 Protein Homology CDS 74496 74768 . - 0 ID=cds-WP_002211242.1;Parent=gene-YPIP275_RS16245;Dbxref=GenBank:WP_002211242.1;Name=WP_002211242.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227540.1;locus_tag=YPIP275_RS16245;product=stress-induced protein YchH;protein_id=WP_002211242.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 75130 75720 . + . ID=gene-YPIP275_RS16250;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=YPIP275_RS16250;old_locus_tag=YPIP275_0687 NZ_AAOS02000017.1 Protein Homology CDS 75130 75720 . + 0 ID=cds-WP_002218168.1;Parent=gene-YPIP275_RS16250;Dbxref=GenBank:WP_002218168.1;Name=WP_002218168.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256499.1;locus_tag=YPIP275_RS16250;product=aminoacyl-tRNA hydrolase;protein_id=WP_002218168.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 75884 76975 . + . ID=gene-YPIP275_RS16255;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=YPIP275_RS16255;old_locus_tag=YPIP275_0688 NZ_AAOS02000017.1 Protein Homology CDS 75884 76975 . + 0 ID=cds-WP_002211245.1;Parent=gene-YPIP275_RS16255;Dbxref=GenBank:WP_002211245.1;Name=WP_002211245.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=YPIP275_RS16255;product=redox-regulated ATPase YchF;protein_id=WP_002211245.1;transl_table=11 NZ_AAOS02000017.1 RefSeq pseudogene 77188 78113 . + . ID=gene-YPIP275_RS28830;Name=YPIP275_RS28830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28830;pseudo=true NZ_AAOS02000017.1 Protein Homology CDS 77188 78113 . + 0 ID=cds-YPIP275_RS28830;Parent=gene-YPIP275_RS28830;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015344209.1;locus_tag=YPIP275_RS28830;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 78161 78559 . - . ID=gene-YPIP275_RS16270;Name=YPIP275_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16270;old_locus_tag=YPIP275_0690 NZ_AAOS02000017.1 Protein Homology CDS 78161 78559 . - 0 ID=cds-WP_002211247.1;Parent=gene-YPIP275_RS16270;Dbxref=GenBank:WP_002211247.1;Name=WP_002211247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211247.1;locus_tag=YPIP275_RS16270;product=rhodanese-like domain-containing protein;protein_id=WP_002211247.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 78567 79397 . - . ID=gene-YPIP275_RS16275;Name=YPIP275_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16275;old_locus_tag=YPIP275_0691 NZ_AAOS02000017.1 Protein Homology CDS 78567 79397 . - 0 ID=cds-WP_002211248.1;Parent=gene-YPIP275_RS16275;Dbxref=GenBank:WP_002211248.1;Name=WP_002211248.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211248.1;locus_tag=YPIP275_RS16275;product=alpha/beta hydrolase;protein_id=WP_002211248.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 79394 80050 . - . ID=gene-YPIP275_RS16280;Name=YPIP275_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16280;old_locus_tag=YPIP275_0692 NZ_AAOS02000017.1 Protein Homology CDS 79394 80050 . - 0 ID=cds-WP_002216887.1;Parent=gene-YPIP275_RS16280;Dbxref=GenBank:WP_002216887.1;Name=WP_002216887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906220.1;locus_tag=YPIP275_RS16280;product=hypothetical protein;protein_id=WP_002216887.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 80681 81523 . + . ID=gene-YPIP275_RS16285;Name=YPIP275_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16285;old_locus_tag=YPIP275_0693 NZ_AAOS02000017.1 Protein Homology CDS 80681 81523 . + 0 ID=cds-WP_002211249.1;Parent=gene-YPIP275_RS16285;Dbxref=GenBank:WP_002211249.1;Name=WP_002211249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211249.1;locus_tag=YPIP275_RS16285;product=DUF4087 domain-containing protein;protein_id=WP_002211249.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 81732 82427 . - . ID=gene-YPIP275_RS16290;Name=YPIP275_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16290;old_locus_tag=YPIP275_0694 NZ_AAOS02000017.1 Protein Homology CDS 81732 82427 . - 0 ID=cds-WP_002211250.1;Parent=gene-YPIP275_RS16290;Dbxref=GenBank:WP_002211250.1;Name=WP_002211250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211250.1;locus_tag=YPIP275_RS16290;product=DUF4405 domain-containing protein;protein_id=WP_002211250.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 82442 83107 . - . ID=gene-YPIP275_RS16295;Name=YPIP275_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16295;old_locus_tag=YPIP275_0695 NZ_AAOS02000017.1 Protein Homology CDS 82442 83107 . - 0 ID=cds-WP_002211251.1;Parent=gene-YPIP275_RS16295;Dbxref=GenBank:WP_002211251.1;Name=WP_002211251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192394.1;locus_tag=YPIP275_RS16295;product=flavodoxin;protein_id=WP_002211251.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 83298 84389 . - . ID=gene-YPIP275_RS16300;Name=YPIP275_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16300;old_locus_tag=YPIP275_0696 NZ_AAOS02000017.1 Protein Homology CDS 83298 84389 . - 0 ID=cds-WP_002211252.1;Parent=gene-YPIP275_RS16300;Dbxref=GenBank:WP_002211252.1;Name=WP_002211252.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304125.1;locus_tag=YPIP275_RS16300;product=alpha/beta hydrolase;protein_id=WP_002211252.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 84654 85346 . + . ID=gene-YPIP275_RS16305;Name=YPIP275_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16305;old_locus_tag=YPIP275_0697 NZ_AAOS02000017.1 Protein Homology CDS 84654 85346 . + 0 ID=cds-WP_002211253.1;Parent=gene-YPIP275_RS16305;Dbxref=GenBank:WP_002211253.1;Name=WP_002211253.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211253.1;locus_tag=YPIP275_RS16305;product=heavy metal response regulator transcription factor;protein_id=WP_002211253.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 85358 86743 . + . ID=gene-YPIP275_RS16310;Name=YPIP275_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16310;old_locus_tag=YPIP275_0698 NZ_AAOS02000017.1 Protein Homology CDS 85358 86743 . + 0 ID=cds-WP_002211254.1;Parent=gene-YPIP275_RS16310;Dbxref=GenBank:WP_002211254.1;Name=WP_002211254.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211254.1;locus_tag=YPIP275_RS16310;product=heavy metal sensor histidine kinase;protein_id=WP_002211254.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 87020 87442 . + . ID=gene-YPIP275_RS16315;Name=YPIP275_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16315;old_locus_tag=YPIP275_0699 NZ_AAOS02000017.1 Protein Homology CDS 87020 87442 . + 0 ID=cds-WP_002211255.1;Parent=gene-YPIP275_RS16315;Dbxref=GenBank:WP_002211255.1;Name=WP_002211255.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211255.1;locus_tag=YPIP275_RS16315;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_002211255.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 87497 87967 . + . ID=gene-YPIP275_RS16320;Name=YPIP275_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16320;old_locus_tag=YPIP275_0700 NZ_AAOS02000017.1 Protein Homology CDS 87497 87967 . + 0 ID=cds-WP_002211256.1;Parent=gene-YPIP275_RS16320;Dbxref=GenBank:WP_002211256.1;Name=WP_002211256.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304126.1;locus_tag=YPIP275_RS16320;product=(R)-mandelonitrile lyase;protein_id=WP_002211256.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 88180 89253 . + . ID=gene-YPIP275_RS16325;Name=YPIP275_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16325;old_locus_tag=YPIP275_0701 NZ_AAOS02000017.1 Protein Homology CDS 88180 89253 . + 0 ID=cds-WP_002211257.1;Parent=gene-YPIP275_RS16325;Dbxref=GenBank:WP_002211257.1;Name=WP_002211257.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192391.1;locus_tag=YPIP275_RS16325;product=alpha/beta hydrolase;protein_id=WP_002211257.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 90044 90949 . + . ID=gene-YPIP275_RS16330;Name=YPIP275_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16330;old_locus_tag=YPIP275_0702 NZ_AAOS02000017.1 Protein Homology CDS 90044 90949 . + 0 ID=cds-WP_002211258.1;Parent=gene-YPIP275_RS16330;Dbxref=GenBank:WP_002211258.1;Name=WP_002211258.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105154.1;locus_tag=YPIP275_RS16330;product=HEAT repeat domain-containing protein;protein_id=WP_002211258.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 90955 91887 . + . ID=gene-YPIP275_RS16335;Name=YPIP275_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16335;old_locus_tag=YPIP275_0703 NZ_AAOS02000017.1 Protein Homology CDS 90955 91887 . + 0 ID=cds-WP_002211259.1;Parent=gene-YPIP275_RS16335;Dbxref=GenBank:WP_002211259.1;Name=WP_002211259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229703.1;locus_tag=YPIP275_RS16335;product=hypothetical protein;protein_id=WP_002211259.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 91874 92824 . + . ID=gene-YPIP275_RS16340;Name=YPIP275_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16340;old_locus_tag=YPIP275_0704 NZ_AAOS02000017.1 Protein Homology CDS 91874 92824 . + 0 ID=cds-WP_002211260.1;Parent=gene-YPIP275_RS16340;Dbxref=GenBank:WP_002211260.1;Name=WP_002211260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224463.1;locus_tag=YPIP275_RS16340;product=hypothetical protein;protein_id=WP_002211260.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 92870 93013 . + . ID=gene-YPIP275_RS28835;Name=YPIP275_RS28835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28835 NZ_AAOS02000017.1 Protein Homology CDS 92870 93013 . + 0 ID=cds-WP_002214321.1;Parent=gene-YPIP275_RS28835;Dbxref=GenBank:WP_002214321.1;Name=WP_002214321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214321.1;locus_tag=YPIP275_RS28835;product=hypothetical protein;protein_id=WP_002214321.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 93165 93845 . + . ID=gene-YPIP275_RS16345;Name=YPIP275_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16345;old_locus_tag=YPIP275_0705 NZ_AAOS02000017.1 Protein Homology CDS 93165 93845 . + 0 ID=cds-WP_002211261.1;Parent=gene-YPIP275_RS16345;Dbxref=GenBank:WP_002211261.1;Name=WP_002211261.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211261.1;locus_tag=YPIP275_RS16345;product=SDR family oxidoreductase;protein_id=WP_002211261.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 93950 94609 . + . ID=gene-YPIP275_RS16350;Name=YPIP275_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16350;old_locus_tag=YPIP275_0706 NZ_AAOS02000017.1 Protein Homology CDS 93950 94609 . + 0 ID=cds-WP_002211262.1;Parent=gene-YPIP275_RS16350;Dbxref=GenBank:WP_002211262.1;Name=WP_002211262.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211262.1;locus_tag=YPIP275_RS16350;product=class I SAM-dependent methyltransferase;protein_id=WP_002211262.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 94744 95382 . - . ID=gene-YPIP275_RS16355;Name=YPIP275_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16355;old_locus_tag=YPIP275_0707 NZ_AAOS02000017.1 Protein Homology CDS 94744 95382 . - 0 ID=cds-WP_002211263.1;Parent=gene-YPIP275_RS16355;Dbxref=GenBank:WP_002211263.1;Name=WP_002211263.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227724.1;locus_tag=YPIP275_RS16355;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_002211263.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 95629 97740 . - . ID=gene-YPIP275_RS16365;Name=YPIP275_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16365;old_locus_tag=YPIP275_0709 NZ_AAOS02000017.1 Protein Homology CDS 95629 97740 . - 0 ID=cds-WP_002211265.1;Parent=gene-YPIP275_RS16365;Dbxref=GenBank:WP_002211265.1;Name=WP_002211265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211265.1;locus_tag=YPIP275_RS16365;product=DUF4034 domain-containing protein;protein_id=WP_002211265.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 98318 100480 . + . ID=gene-YPIP275_RS16370;Name=YPIP275_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16370;old_locus_tag=YPIP275_0710 NZ_AAOS02000017.1 Protein Homology CDS 98318 100480 . + 0 ID=cds-WP_002211266.1;Parent=gene-YPIP275_RS16370;Dbxref=GenBank:WP_002211266.1;Name=WP_002211266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304128.1;locus_tag=YPIP275_RS16370;product=SEL1-like repeat protein;protein_id=WP_002211266.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 100600 101808 . - . ID=gene-YPIP275_RS16375;Name=YPIP275_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16375;old_locus_tag=YPIP275_0711 NZ_AAOS02000017.1 Protein Homology CDS 100600 101808 . - 0 ID=cds-WP_002209743.1-13;Parent=gene-YPIP275_RS16375;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS16375;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 101927 103585 . + . ID=gene-YPIP275_RS16380;Name=YPIP275_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16380;old_locus_tag=YPIP275_0712 NZ_AAOS02000017.1 Protein Homology CDS 101927 103585 . + 0 ID=cds-WP_002211267.1;Parent=gene-YPIP275_RS16380;Dbxref=GenBank:WP_002211267.1;Name=WP_002211267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002226916.1;locus_tag=YPIP275_RS16380;product=hypothetical protein;protein_id=WP_002211267.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 103755 104219 . + . ID=gene-YPIP275_RS16385;Name=YPIP275_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16385;old_locus_tag=YPIP275_0713 NZ_AAOS02000017.1 Protein Homology CDS 103755 104219 . + 0 ID=cds-WP_002211268.1;Parent=gene-YPIP275_RS16385;Dbxref=GenBank:WP_002211268.1;Name=WP_002211268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211268.1;locus_tag=YPIP275_RS16385;product=hypothetical protein;protein_id=WP_002211268.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 104380 105567 . - . ID=gene-YPIP275_RS16390;Name=YPIP275_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16390;old_locus_tag=YPIP275_0714 NZ_AAOS02000017.1 Protein Homology CDS 104380 105567 . - 0 ID=cds-WP_002211269.1;Parent=gene-YPIP275_RS16390;Dbxref=GenBank:WP_002211269.1;Name=WP_002211269.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105159.1;locus_tag=YPIP275_RS16390;product=glycosyltransferase;protein_id=WP_002211269.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 105564 106148 . - . ID=gene-YPIP275_RS16395;Name=YPIP275_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16395;old_locus_tag=YPIP275_0715 NZ_AAOS02000017.1 Protein Homology CDS 105564 106148 . - 0 ID=cds-WP_002211270.1;Parent=gene-YPIP275_RS16395;Dbxref=GenBank:WP_002211270.1;Name=WP_002211270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211270.1;locus_tag=YPIP275_RS16395;product=hypothetical protein;protein_id=WP_002211270.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 106145 107299 . - . ID=gene-YPIP275_RS16400;Name=YPIP275_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16400;old_locus_tag=YPIP275_0716 NZ_AAOS02000017.1 Protein Homology CDS 106145 107299 . - 0 ID=cds-WP_002214329.1;Parent=gene-YPIP275_RS16400;Dbxref=GenBank:WP_002214329.1;Name=WP_002214329.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192384.1;locus_tag=YPIP275_RS16400;product=glycosyltransferase;protein_id=WP_002214329.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 107299 108261 . - . ID=gene-YPIP275_RS16405;Name=YPIP275_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16405;old_locus_tag=YPIP275_0717 NZ_AAOS02000017.1 Protein Homology CDS 107299 108261 . - 0 ID=cds-WP_002211271.1;Parent=gene-YPIP275_RS16405;Dbxref=GenBank:WP_002211271.1;Name=WP_002211271.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211271.1;locus_tag=YPIP275_RS16405;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_002211271.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 108395 109681 . - . ID=gene-YPIP275_RS16410;Name=YPIP275_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16410;old_locus_tag=YPIP275_0718 NZ_AAOS02000017.1 Protein Homology CDS 108395 109681 . - 0 ID=cds-WP_002211273.1;Parent=gene-YPIP275_RS16410;Dbxref=GenBank:WP_002211273.1;Name=WP_002211273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192382.1;locus_tag=YPIP275_RS16410;product=F390 synthetase-related protein;protein_id=WP_002211273.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 109678 110484 . - . ID=gene-YPIP275_RS16415;Name=YPIP275_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16415;old_locus_tag=YPIP275_0720 NZ_AAOS02000017.1 Protein Homology CDS 109678 110484 . - 0 ID=cds-WP_002214335.1;Parent=gene-YPIP275_RS16415;Dbxref=GenBank:WP_002214335.1;Name=WP_002214335.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214335.1;locus_tag=YPIP275_RS16415;product=MBL fold metallo-hydrolase;protein_id=WP_002214335.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 110477 111493 . - . ID=gene-YPIP275_RS16420;Name=YPIP275_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16420;old_locus_tag=YPIP275_0721 NZ_AAOS02000017.1 Protein Homology CDS 110477 111493 . - 0 ID=cds-WP_002211275.1;Parent=gene-YPIP275_RS16420;Dbxref=GenBank:WP_002211275.1;Name=WP_002211275.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211275.1;locus_tag=YPIP275_RS16420;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_002211275.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 111507 112037 . - . ID=gene-YPIP275_RS28840;Name=YPIP275_RS28840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28840 NZ_AAOS02000017.1 Protein Homology CDS 111507 112037 . - 0 ID=cds-WP_002214337.1;Parent=gene-YPIP275_RS28840;Dbxref=GenBank:WP_002214337.1;Name=WP_002214337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214337.1;locus_tag=YPIP275_RS28840;product=3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein;protein_id=WP_002214337.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 112006 112515 . - . ID=gene-YPIP275_RS28845;Name=YPIP275_RS28845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28845 NZ_AAOS02000017.1 Protein Homology CDS 112006 112515 . - 0 ID=cds-WP_002214339.1;Parent=gene-YPIP275_RS28845;Dbxref=GenBank:WP_002214339.1;Name=WP_002214339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214339.1;locus_tag=YPIP275_RS28845;product=thiolase;protein_id=WP_002214339.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 113524 115128 . + . ID=gene-YPIP275_RS16435;Name=YPIP275_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16435;old_locus_tag=YPIP275_0724 NZ_AAOS02000017.1 Protein Homology CDS 113524 115128 . + 0 ID=cds-WP_002211277.1;Parent=gene-YPIP275_RS16435;Dbxref=GenBank:WP_002211277.1;Name=WP_002211277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229736.1;locus_tag=YPIP275_RS16435;product=chorismate-binding protein;protein_id=WP_002211277.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 115306 115878 . - . ID=gene-YPIP275_RS16440;Name=YPIP275_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16440;old_locus_tag=YPIP275_0725 NZ_AAOS02000017.1 Protein Homology CDS 115306 115878 . - 0 ID=cds-WP_002211278.1;Parent=gene-YPIP275_RS16440;Dbxref=GenBank:WP_002211278.1;Name=WP_002211278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211278.1;locus_tag=YPIP275_RS16440;product=HutD/Ves family protein;protein_id=WP_002211278.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 115878 117248 . - . ID=gene-YPIP275_RS16445;Name=YPIP275_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS16445;old_locus_tag=YPIP275_0726 NZ_AAOS02000017.1 Protein Homology CDS 115878 117248 . - 0 ID=cds-WP_002211279.1;Parent=gene-YPIP275_RS16445;Dbxref=GenBank:WP_002211279.1;Name=WP_002211279.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005271963.1;locus_tag=YPIP275_RS16445;product=formimidoylglutamate deiminase;protein_id=WP_002211279.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 117396 118163 . + . ID=gene-YPIP275_RS16450;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=YPIP275_RS16450;old_locus_tag=YPIP275_0727 NZ_AAOS02000017.1 Protein Homology CDS 117396 118163 . + 0 ID=cds-WP_002211280.1;Parent=gene-YPIP275_RS16450;Dbxref=GenBank:WP_002211280.1;Name=WP_002211280.1;Ontology_term=GO:0006355,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005185115.1;locus_tag=YPIP275_RS16450;product=histidine utilization transcriptional repressor HutC;protein_id=WP_002211280.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 118367 119587 . + . ID=gene-YPIP275_RS16455;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=YPIP275_RS16455;old_locus_tag=YPIP275_0728 NZ_AAOS02000017.1 Protein Homology CDS 118367 119587 . + 0 ID=cds-WP_002211281.1;Parent=gene-YPIP275_RS16455;Dbxref=GenBank:WP_002211281.1;Name=WP_002211281.1;Ontology_term=GO:0006548,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304136.1;locus_tag=YPIP275_RS16455;product=imidazolonepropionase;protein_id=WP_002211281.1;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 119584 120390 . + . ID=gene-YPIP275_RS16460;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=YPIP275_RS16460;old_locus_tag=YPIP275_0729 NZ_AAOS02000017.1 Protein Homology CDS 119584 120390 . + 0 ID=cds-WP_002211282.1;Parent=gene-YPIP275_RS16460;Dbxref=GenBank:WP_002211282.1;Name=WP_002211282.1;Ontology_term=GO:0006548,GO:0050129;gbkey=CDS;gene=hutG;go_function=N-formylglutamate deformylase activity|0050129||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105168.1;locus_tag=YPIP275_RS16460;product=N-formylglutamate deformylase;protein_id=WP_002211282.1;transl_table=11 NZ_AAOS02000017.1 RefSeq pseudogene 120663 120875 . - . ID=gene-YPIP275_RS27590;Name=YPIP275_RS27590;end_range=120875,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS27590;old_locus_tag=YPIP275_0730;partial=true;pseudo=true NZ_AAOS02000017.1 Protein Homology CDS 120663 120875 . - 0 ID=cds-YPIP275_RS27590;Parent=gene-YPIP275_RS27590;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0034220,GO:0015288,GO:0009279,GO:0016020;end_range=120875,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079224.1;locus_tag=YPIP275_RS27590;partial=true;product=porin;pseudo=true;transl_table=11 NZ_AAOS02000017.1 RefSeq gene 120943 121687 . - . ID=gene-YPIP275_RS16465;Name=istB;end_range=121687,.;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS16465;old_locus_tag=YPIP275_0731;partial=true NZ_AAOS02000017.1 Protein Homology CDS 120943 121687 . - 1 ID=cds-WP_002211284.1;Parent=gene-YPIP275_RS16465;Dbxref=GenBank:WP_002211284.1;Name=WP_002211284.1;end_range=121687,.;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS16465;partial=true;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_002211284.1;transl_table=11 ##sequence-region NZ_AAOS02000016.1 1 135812 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000016.1 RefSeq region 1 135812 . + . ID=NZ_AAOS02000016.1:1..135812;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000016.1 RefSeq gene 148 960 . - . ID=gene-YPIP275_RS15200;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=YPIP275_RS15200;old_locus_tag=YPIP275_2107 NZ_AAOS02000016.1 Protein Homology CDS 148 960 . - 0 ID=cds-WP_002211042.1;Parent=gene-YPIP275_RS15200;Dbxref=GenBank:WP_002211042.1;Name=WP_002211042.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211042.1;locus_tag=YPIP275_RS15200;product=DgsA anti-repressor MtfA;protein_id=WP_002211042.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 1350 1634 . - . ID=gene-YPIP275_RS15205;Name=YPIP275_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15205;old_locus_tag=YPIP275_2108 NZ_AAOS02000016.1 Protein Homology CDS 1350 1634 . - 0 ID=cds-WP_002211043.1;Parent=gene-YPIP275_RS15205;Dbxref=GenBank:WP_002211043.1;Name=WP_002211043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211043.1;locus_tag=YPIP275_RS15205;product=YciI family protein;protein_id=WP_002211043.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 1871 2722 . - . ID=gene-YPIP275_RS15210;Name=YPIP275_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15210;old_locus_tag=YPIP275_2109 NZ_AAOS02000016.1 Protein Homology CDS 1871 2722 . - 0 ID=cds-WP_002211044.1;Parent=gene-YPIP275_RS15210;Dbxref=GenBank:WP_002211044.1;Name=WP_002211044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211044.1;locus_tag=YPIP275_RS15210;product=PA4780 family RIO1-like protein kinase;protein_id=WP_002211044.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 2825 4543 . - . ID=gene-YPIP275_RS15215;Name=YPIP275_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15215;old_locus_tag=YPIP275_2110 NZ_AAOS02000016.1 Protein Homology CDS 2825 4543 . - 0 ID=cds-WP_002211045.1;Parent=gene-YPIP275_RS15215;Dbxref=GenBank:WP_002211045.1;Name=WP_002211045.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683658.1;locus_tag=YPIP275_RS15215;product=ABC transporter ATP-binding protein;protein_id=WP_002211045.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 5199 5363 . + . ID=gene-YPIP275_RS15220;Name=YPIP275_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15220;old_locus_tag=YPIP275_2112 NZ_AAOS02000016.1 Protein Homology CDS 5199 5363 . + 0 ID=cds-WP_002211047.1;Parent=gene-YPIP275_RS15220;Dbxref=GenBank:WP_002211047.1;Name=WP_002211047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211047.1;locus_tag=YPIP275_RS15220;product=hypothetical protein;protein_id=WP_002211047.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 5445 5831 . - . ID=gene-YPIP275_RS15225;Name=YPIP275_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15225;old_locus_tag=YPIP275_2113 NZ_AAOS02000016.1 Protein Homology CDS 5445 5831 . - 0 ID=cds-WP_002211048.1;Parent=gene-YPIP275_RS15225;Dbxref=GenBank:WP_002211048.1;Name=WP_002211048.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224436.1;locus_tag=YPIP275_RS15225;product=helix-turn-helix domain-containing protein;protein_id=WP_002211048.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 6387 6626 . + . ID=gene-YPIP275_RS15235;Name=YPIP275_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15235;old_locus_tag=YPIP275_2115 NZ_AAOS02000016.1 Protein Homology CDS 6387 6626 . + 0 ID=cds-WP_002211050.1;Parent=gene-YPIP275_RS15235;Dbxref=GenBank:WP_002211050.1;Name=WP_002211050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005170549.1;locus_tag=YPIP275_RS15235;product=DUF2766 family protein;protein_id=WP_002211050.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 6717 6950 . - . ID=gene-YPIP275_RS15240;Name=YPIP275_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15240;old_locus_tag=YPIP275_2116 NZ_AAOS02000016.1 Protein Homology CDS 6717 6950 . - 0 ID=cds-WP_002216493.1;Parent=gene-YPIP275_RS15240;Dbxref=GenBank:WP_002216493.1;Name=WP_002216493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650015.1;locus_tag=YPIP275_RS15240;product=YobH family protein;protein_id=WP_002216493.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 7186 7329 . + . ID=gene-YPIP275_RS27535;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=YPIP275_RS27535 NZ_AAOS02000016.1 Protein Homology CDS 7186 7329 . + 0 ID=cds-WP_002430101.1;Parent=gene-YPIP275_RS27535;Dbxref=GenBank:WP_002430101.1;Name=WP_002430101.1;Ontology_term=GO:0046677;gbkey=CDS;gene=mgrB;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005170546.1;locus_tag=YPIP275_RS27535;product=PhoP/PhoQ regulatory lipoprotein MgrB;protein_id=WP_002430101.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 7533 7808 . + . ID=gene-YPIP275_RS15245;Name=YPIP275_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15245;old_locus_tag=YPIP275_2117 NZ_AAOS02000016.1 Protein Homology CDS 7533 7808 . + 0 ID=cds-WP_002216495.1;Parent=gene-YPIP275_RS15245;Dbxref=GenBank:WP_002216495.1;Name=WP_002216495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216495.1;locus_tag=YPIP275_RS15245;product=YebO family protein;protein_id=WP_002216495.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 8071 8370 . + . ID=gene-YPIP275_RS15250;Name=YPIP275_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15250;old_locus_tag=YPIP275_2118 NZ_AAOS02000016.1 Protein Homology CDS 8071 8370 . + 0 ID=cds-WP_002211053.1;Parent=gene-YPIP275_RS15250;Dbxref=GenBank:WP_002211053.1;Name=WP_002211053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163675.1;locus_tag=YPIP275_RS15250;product=phage protein NinX family protein;protein_id=WP_002211053.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 8479 8724 . + . ID=gene-YPIP275_RS15255;Name=YPIP275_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15255;old_locus_tag=YPIP275_2119 NZ_AAOS02000016.1 Protein Homology CDS 8479 8724 . + 0 ID=cds-WP_002211054.1;Parent=gene-YPIP275_RS15255;Dbxref=GenBank:WP_002211054.1;Name=WP_002211054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211054.1;locus_tag=YPIP275_RS15255;product=DUF4060 family protein;protein_id=WP_002211054.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 8961 10334 . + . ID=gene-YPIP275_RS15260;Name=YPIP275_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15260;old_locus_tag=YPIP275_2120 NZ_AAOS02000016.1 Protein Homology CDS 8961 10334 . + 0 ID=cds-WP_002211055.1;Parent=gene-YPIP275_RS15260;Dbxref=GenBank:WP_002211055.1;Name=WP_002211055.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211055.1;locus_tag=YPIP275_RS15260;product=amino acid permease;protein_id=WP_002211055.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 10639 11238 . - . ID=gene-YPIP275_RS15265;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=YPIP275_RS15265;old_locus_tag=YPIP275_2121 NZ_AAOS02000016.1 Protein Homology CDS 10639 11238 . - 0 ID=cds-WP_002221007.1;Parent=gene-YPIP275_RS15265;Dbxref=GenBank:WP_002221007.1;Name=WP_002221007.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229461.1;locus_tag=YPIP275_RS15265;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_002221007.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 12240 12356 . + . ID=gene-YPIP275_RS15275;Name=YPIP275_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15275;old_locus_tag=YPIP275_2123 NZ_AAOS02000016.1 Protein Homology CDS 12240 12356 . + 0 ID=cds-WP_002211058.1;Parent=gene-YPIP275_RS15275;Dbxref=GenBank:WP_002211058.1;Name=WP_002211058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211058.1;locus_tag=YPIP275_RS15275;product=DUF2627 domain-containing protein;protein_id=WP_002211058.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 12399 12608 . + . ID=gene-YPIP275_RS15280;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=YPIP275_RS15280 NZ_AAOS02000016.1 Protein Homology CDS 12399 12608 . + 0 ID=cds-WP_002221949.1;Parent=gene-YPIP275_RS15280;Dbxref=GenBank:WP_002221949.1;Name=WP_002221949.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004094893.1;locus_tag=YPIP275_RS15280;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_002221949.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 12699 13454 . - . ID=gene-YPIP275_RS15285;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=YPIP275_RS15285;old_locus_tag=YPIP275_2125 NZ_AAOS02000016.1 Protein Homology CDS 12699 13454 . - 0 ID=cds-WP_002211060.1;Parent=gene-YPIP275_RS15285;Dbxref=GenBank:WP_002211060.1;Name=WP_002211060.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413644.1;locus_tag=YPIP275_RS15285;product=peptidoglycan editing factor PgeF;protein_id=WP_002211060.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 13849 14688 . + . ID=gene-YPIP275_RS15290;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=YPIP275_RS15290;old_locus_tag=YPIP275_2126 NZ_AAOS02000016.1 Protein Homology CDS 13849 14688 . + 0 ID=cds-WP_002211061.1;Parent=gene-YPIP275_RS15290;Dbxref=GenBank:WP_002211061.1;Name=WP_002211061.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211061.1;locus_tag=YPIP275_RS15290;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_002211061.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 14910 15188 . - . ID=gene-YPIP275_RS15295;Name=YPIP275_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15295;old_locus_tag=YPIP275_2127 NZ_AAOS02000016.1 Protein Homology CDS 14910 15188 . - 0 ID=cds-WP_002211062.1;Parent=gene-YPIP275_RS15295;Dbxref=GenBank:WP_002211062.1;Name=WP_002211062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650009.1;locus_tag=YPIP275_RS15295;product=hypothetical protein;protein_id=WP_002211062.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 15410 17491 . - . ID=gene-YPIP275_RS15300;Name=YPIP275_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15300;old_locus_tag=YPIP275_2128 NZ_AAOS02000016.1 Protein Homology CDS 15410 17491 . - 0 ID=cds-WP_002211063.1;Parent=gene-YPIP275_RS15300;Dbxref=GenBank:WP_002211063.1;Name=WP_002211063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413645.1;locus_tag=YPIP275_RS15300;product=PAS domain S-box protein;protein_id=WP_002211063.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 17913 20126 . + . ID=gene-YPIP275_RS15305;Name=YPIP275_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15305;old_locus_tag=YPIP275_2129 NZ_AAOS02000016.1 Protein Homology CDS 17913 20126 . + 0 ID=cds-WP_002211064.1;Parent=gene-YPIP275_RS15305;Dbxref=GenBank:WP_002211064.1;Name=WP_002211064.1;Ontology_term=GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211064.1;locus_tag=YPIP275_RS15305;product=TonB-dependent receptor;protein_id=WP_002211064.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 20287 20856 . - . ID=gene-YPIP275_RS15310;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=YPIP275_RS15310;old_locus_tag=YPIP275_2130 NZ_AAOS02000016.1 Protein Homology CDS 20287 20856 . - 0 ID=cds-WP_002211065.1;Parent=gene-YPIP275_RS15310;Dbxref=GenBank:WP_002211065.1;Name=WP_002211065.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211065.1;locus_tag=YPIP275_RS15310;product=manganese efflux pump MntP;protein_id=WP_002211065.1;transl_table=11 NZ_AAOS02000016.1 cmsearch riboswitch 20867 21066 . - . ID=id-NZ_AAOS02000016.1:20867..21066;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_AAOS02000016.1 RefSeq gene 21285 21746 . - . ID=gene-YPIP275_RS15315;Name=YPIP275_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15315;old_locus_tag=YPIP275_2131 NZ_AAOS02000016.1 Protein Homology CDS 21285 21746 . - 0 ID=cds-WP_002211066.1;Parent=gene-YPIP275_RS15315;Dbxref=GenBank:WP_002211066.1;Name=WP_002211066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005272513.1;locus_tag=YPIP275_RS15315;product=DUF986 family protein;protein_id=WP_002211066.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 21946 22824 . - . ID=gene-YPIP275_RS15320;Name=YPIP275_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15320;old_locus_tag=YPIP275_2132 NZ_AAOS02000016.1 Protein Homology CDS 21946 22824 . - 0 ID=cds-WP_002211067.1;Parent=gene-YPIP275_RS15320;Dbxref=GenBank:WP_002211067.1;Name=WP_002211067.1;Ontology_term=GO:0009401,GO:0015761,GO:0022870,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-mannose phosphotransferase system transporter activity|0022870||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,mannose transmembrane transport|0015761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211067.1;locus_tag=YPIP275_RS15320;product=PTS mannose transporter subunit IID;protein_id=WP_002211067.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 22840 23637 . - . ID=gene-YPIP275_RS15325;Name=YPIP275_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15325;old_locus_tag=YPIP275_2133 NZ_AAOS02000016.1 Protein Homology CDS 22840 23637 . - 0 ID=cds-WP_002211068.1;Parent=gene-YPIP275_RS15325;Dbxref=GenBank:WP_002211068.1;Name=WP_002211068.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310555.1;locus_tag=YPIP275_RS15325;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=WP_002211068.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 23729 24703 . - . ID=gene-YPIP275_RS15330;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=YPIP275_RS15330;old_locus_tag=YPIP275_2134 NZ_AAOS02000016.1 Protein Homology CDS 23729 24703 . - 0 ID=cds-WP_002211069.1;Parent=gene-YPIP275_RS15330;Dbxref=GenBank:WP_002211069.1;Name=WP_002211069.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218559.1;locus_tag=YPIP275_RS15330;product=PTS mannose transporter subunit IIAB;protein_id=WP_002211069.1;transl_table=11 NZ_AAOS02000016.1 RefSeq pseudogene 25413 26868 . + . ID=gene-YPIP275_RS15335;Name=YPIP275_RS15335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS15335;old_locus_tag=YPIP275_2135;pseudo=true NZ_AAOS02000016.1 Protein Homology CDS 25413 26868 . + 0 ID=cds-YPIP275_RS15335;Parent=gene-YPIP275_RS15335;Note=frameshifted;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145524.1;locus_tag=YPIP275_RS15335;product=TerC family protein;pseudo=true;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 26970 27437 . - . ID=gene-YPIP275_RS15340;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=YPIP275_RS15340;old_locus_tag=YPIP275_2136 NZ_AAOS02000016.1 Protein Homology CDS 26970 27437 . - 0 ID=cds-WP_002211070.1;Parent=gene-YPIP275_RS15340;Dbxref=GenBank:WP_002211070.1;Name=WP_002211070.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211070.1;locus_tag=YPIP275_RS15340;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_002211070.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 27821 28453 . + . ID=gene-YPIP275_RS15345;Name=YPIP275_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15345;old_locus_tag=YPIP275_2137 NZ_AAOS02000016.1 Protein Homology CDS 27821 28453 . + 0 ID=cds-WP_002214880.1;Parent=gene-YPIP275_RS15345;Dbxref=GenBank:WP_002214880.1;Name=WP_002214880.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683656.1;locus_tag=YPIP275_RS15345;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_002214880.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 28450 29214 . + . ID=gene-YPIP275_RS15350;Name=YPIP275_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15350;old_locus_tag=YPIP275_2138 NZ_AAOS02000016.1 Protein Homology CDS 28450 29214 . + 0 ID=cds-WP_002214882.1;Parent=gene-YPIP275_RS15350;Dbxref=GenBank:WP_002214882.1;Name=WP_002214882.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=YPIP275_RS15350;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_002214882.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 29211 30608 . + . ID=gene-YPIP275_RS15355;Name=YPIP275_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15355;old_locus_tag=YPIP275_2139 NZ_AAOS02000016.1 Protein Homology CDS 29211 30608 . + 0 ID=cds-WP_002211071.1;Parent=gene-YPIP275_RS15355;Dbxref=GenBank:WP_002211071.1;Name=WP_002211071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710092.1;locus_tag=YPIP275_RS15355;product=aldehyde dehydrogenase;protein_id=WP_002211071.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 30727 31584 . + . ID=gene-YPIP275_RS15360;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=YPIP275_RS15360;old_locus_tag=YPIP275_2140 NZ_AAOS02000016.1 Protein Homology CDS 30727 31584 . + 0 ID=cds-WP_002211072.1;Parent=gene-YPIP275_RS15360;Dbxref=GenBank:WP_002211072.1;Name=WP_002211072.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211072.1;locus_tag=YPIP275_RS15360;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_002211072.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 31609 32007 . + . ID=gene-YPIP275_RS15365;Name=YPIP275_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15365;old_locus_tag=YPIP275_2141 NZ_AAOS02000016.1 Protein Homology CDS 31609 32007 . + 0 ID=cds-WP_002211073.1;Parent=gene-YPIP275_RS15365;Dbxref=GenBank:WP_002211073.1;Name=WP_002211073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211073.1;locus_tag=YPIP275_RS15365;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_002211073.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 32001 32804 . + . ID=gene-YPIP275_RS15370;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=YPIP275_RS15370;old_locus_tag=YPIP275_2142 NZ_AAOS02000016.1 Protein Homology CDS 32001 32804 . + 0 ID=cds-WP_002211074.1;Parent=gene-YPIP275_RS15370;Dbxref=GenBank:WP_002211074.1;Name=WP_002211074.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211074.1;locus_tag=YPIP275_RS15370;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_002211074.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 32815 33621 . + . ID=gene-YPIP275_RS15375;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=YPIP275_RS15375;old_locus_tag=YPIP275_2143 NZ_AAOS02000016.1 Protein Homology CDS 32815 33621 . + 0 ID=cds-WP_002211075.1;Parent=gene-YPIP275_RS15375;Dbxref=GenBank:WP_002211075.1;Name=WP_002211075.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231102.1;locus_tag=YPIP275_RS15375;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_002211075.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 33647 35014 . + . ID=gene-YPIP275_RS15380;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=YPIP275_RS15380;old_locus_tag=YPIP275_2144 NZ_AAOS02000016.1 Protein Homology CDS 33647 35014 . + 0 ID=cds-WP_002211076.1;Parent=gene-YPIP275_RS15380;Dbxref=GenBank:WP_002211076.1;Name=WP_002211076.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211076.1;locus_tag=YPIP275_RS15380;product=4-hydroxyphenylacetate permease;protein_id=WP_002211076.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 35082 36644 . + . ID=gene-YPIP275_RS15385;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=YPIP275_RS15385;old_locus_tag=YPIP275_2145 NZ_AAOS02000016.1 Protein Homology CDS 35082 36644 . + 0 ID=cds-WP_002211077.1;Parent=gene-YPIP275_RS15385;Dbxref=GenBank:WP_002211077.1;Name=WP_002211077.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=YPIP275_RS15385;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_002211077.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 36665 37162 . + . ID=gene-YPIP275_RS15390;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=YPIP275_RS15390;old_locus_tag=YPIP275_2146 NZ_AAOS02000016.1 Protein Homology CDS 36665 37162 . + 0 ID=cds-WP_002211078.1;Parent=gene-YPIP275_RS15390;Dbxref=GenBank:WP_002211078.1;Name=WP_002211078.1;Ontology_term=GO:0042537,GO:0016651,GO:0051287;gbkey=CDS;gene=hpaC;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,NAD binding|0051287||IEA;go_process=benzene-containing compound metabolic process|0042537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211078.1;locus_tag=YPIP275_RS15390;product=4-hydroxyphenylacetate 3-monooxygenase%2C reductase component;protein_id=WP_002211078.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 37442 38806 . - . ID=gene-YPIP275_RS15395;Name=YPIP275_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15395;old_locus_tag=YPIP275_2147 NZ_AAOS02000016.1 Protein Homology CDS 37442 38806 . - 0 ID=cds-WP_002211079.1;Parent=gene-YPIP275_RS15395;Dbxref=GenBank:WP_002211079.1;Name=WP_002211079.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211079.1;locus_tag=YPIP275_RS15395;product=L-serine ammonia-lyase;protein_id=WP_002211079.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 39514 40113 . - . ID=gene-YPIP275_RS15400;Name=YPIP275_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15400;old_locus_tag=YPIP275_2148 NZ_AAOS02000016.1 Protein Homology CDS 39514 40113 . - 0 ID=cds-WP_002211080.1;Parent=gene-YPIP275_RS15400;Dbxref=GenBank:WP_002211080.1;Name=WP_002211080.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211080.1;locus_tag=YPIP275_RS15400;product=CoA pyrophosphatase;protein_id=WP_002211080.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 40110 41486 . - . ID=gene-YPIP275_RS15405;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=YPIP275_RS15405;old_locus_tag=YPIP275_2149 NZ_AAOS02000016.1 Protein Homology CDS 40110 41486 . - 0 ID=cds-WP_002211081.1;Parent=gene-YPIP275_RS15405;Dbxref=GenBank:WP_002211081.1;Name=WP_002211081.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192153.1;locus_tag=YPIP275_RS15405;product=aminodeoxychorismate synthase component 1;protein_id=WP_002211081.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 41651 41908 . + . ID=gene-YPIP275_RS15410;Name=YPIP275_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15410;old_locus_tag=YPIP275_2150 NZ_AAOS02000016.1 Protein Homology CDS 41651 41908 . + 0 ID=cds-WP_002211082.1;Parent=gene-YPIP275_RS15410;Dbxref=GenBank:WP_002211082.1;Name=WP_002211082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005183031.1;locus_tag=YPIP275_RS15410;product=YoaH family protein;protein_id=WP_002211082.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 42034 43215 . - . ID=gene-YPIP275_RS15415;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=YPIP275_RS15415;old_locus_tag=YPIP275_2151 NZ_AAOS02000016.1 Protein Homology CDS 42034 43215 . - 0 ID=cds-WP_002211083.1;Parent=gene-YPIP275_RS15415;Dbxref=GenBank:WP_002211083.1;Name=WP_002211083.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211083.1;locus_tag=YPIP275_RS15415;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_002211083.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 43528 44910 . + . ID=gene-YPIP275_RS15420;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS15420;old_locus_tag=YPIP275_2152 NZ_AAOS02000016.1 Protein Homology CDS 43528 44910 . + 0 ID=cds-WP_002211084.1;Parent=gene-YPIP275_RS15420;Dbxref=GenBank:WP_002211084.1;Name=WP_002211084.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192156.1;locus_tag=YPIP275_RS15420;product=ATP-dependent RNA helicase DbpA;protein_id=WP_002211084.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 45004 45324 . + . ID=gene-YPIP275_RS15425;Name=YPIP275_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15425;old_locus_tag=YPIP275_2153 NZ_AAOS02000016.1 Protein Homology CDS 45004 45324 . + 0 ID=cds-WP_002211085.1;Parent=gene-YPIP275_RS15425;Dbxref=GenBank:WP_002211085.1;Name=WP_002211085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105291.1;locus_tag=YPIP275_RS15425;product=YebG family protein;protein_id=WP_002211085.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 45364 45672 . + . ID=gene-YPIP275_RS15430;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=YPIP275_RS15430;old_locus_tag=YPIP275_2154 NZ_AAOS02000016.1 Protein Homology CDS 45364 45672 . + 0 ID=cds-WP_002211086.1;Parent=gene-YPIP275_RS15430;Dbxref=GenBank:WP_002211086.1;Name=WP_002211086.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211086.1;locus_tag=YPIP275_RS15430;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_002211086.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 45779 46189 . + . ID=gene-YPIP275_RS15435;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=YPIP275_RS15435;old_locus_tag=YPIP275_2155 NZ_AAOS02000016.1 Protein Homology CDS 45779 46189 . + 0 ID=cds-WP_002228550.1;Parent=gene-YPIP275_RS15435;Dbxref=GenBank:WP_002228550.1;Name=WP_002228550.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002403600.1;locus_tag=YPIP275_RS15435;product=protein YebF;protein_id=WP_002228550.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 46499 48550 . + . ID=gene-YPIP275_RS15440;Name=YPIP275_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15440;old_locus_tag=YPIP275_2156 NZ_AAOS02000016.1 Protein Homology CDS 46499 48550 . + 0 ID=cds-WP_002211088.1;Parent=gene-YPIP275_RS15440;Dbxref=GenBank:WP_002211088.1;Name=WP_002211088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211088.1;locus_tag=YPIP275_RS15440;product=S9 family peptidase;protein_id=WP_002211088.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 49272 50222 . + . ID=gene-YPIP275_RS15445;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=YPIP275_RS15445;old_locus_tag=YPIP275_2158 NZ_AAOS02000016.1 Protein Homology CDS 49272 50222 . + 0 ID=cds-WP_002211090.1;Parent=gene-YPIP275_RS15445;Dbxref=GenBank:WP_002211090.1;Name=WP_002211090.1;Ontology_term=GO:0030163,GO:0004177,GO:0005737;gbkey=CDS;gene=pip;go_component=cytoplasm|0005737||IEA;go_function=aminopeptidase activity|0004177||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304225.1;locus_tag=YPIP275_RS15445;product=prolyl aminopeptidase;protein_id=WP_002211090.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 50282 50512 . - . ID=gene-YPIP275_RS15450;Name=YPIP275_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15450;old_locus_tag=YPIP275_2159 NZ_AAOS02000016.1 Protein Homology CDS 50282 50512 . - 0 ID=cds-WP_002211091.1;Parent=gene-YPIP275_RS15450;Dbxref=GenBank:WP_002211091.1;Name=WP_002211091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211091.1;locus_tag=YPIP275_RS15450;product=DNA polymerase III subunit theta;protein_id=WP_002211091.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 50913 51422 . + . ID=gene-YPIP275_RS15455;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=YPIP275_RS15455;old_locus_tag=YPIP275_2160 NZ_AAOS02000016.1 Protein Homology CDS 50913 51422 . + 0 ID=cds-WP_002211092.1;Parent=gene-YPIP275_RS15455;Dbxref=GenBank:WP_002211092.1;Name=WP_002211092.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192158.1;locus_tag=YPIP275_RS15455;product=non-heme ferritin;protein_id=WP_002211092.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 51819 52205 . + . ID=gene-YPIP275_RS15460;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=YPIP275_RS15460;old_locus_tag=YPIP275_2161 NZ_AAOS02000016.1 Protein Homology CDS 51819 52205 . + 0 ID=cds-WP_002211093.1;Parent=gene-YPIP275_RS15460;Dbxref=GenBank:WP_002211093.1;Name=WP_002211093.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713112.1;locus_tag=YPIP275_RS15460;product=CopC domain-containing protein YobA;protein_id=WP_002211093.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 52208 53092 . + . ID=gene-YPIP275_RS15465;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=YPIP275_RS15465;old_locus_tag=YPIP275_2162 NZ_AAOS02000016.1 Protein Homology CDS 52208 53092 . + 0 ID=cds-WP_002211094.1;Parent=gene-YPIP275_RS15465;Dbxref=GenBank:WP_002211094.1;Name=WP_002211094.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304224.1;locus_tag=YPIP275_RS15465;product=copper homeostasis membrane protein CopD;protein_id=WP_002211094.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 53189 53530 . + . ID=gene-YPIP275_RS15470;Name=YPIP275_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15470;old_locus_tag=YPIP275_2163 NZ_AAOS02000016.1 Protein Homology CDS 53189 53530 . + 0 ID=cds-WP_002211095.1;Parent=gene-YPIP275_RS15470;Dbxref=GenBank:WP_002211095.1;Name=WP_002211095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211095.1;locus_tag=YPIP275_RS15470;product=YebY family protein;protein_id=WP_002211095.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 54053 54379 . - . ID=gene-YPIP275_RS15480;Name=YPIP275_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15480;old_locus_tag=YPIP275_2164 NZ_AAOS02000016.1 Protein Homology CDS 54053 54379 . - 0 ID=cds-WP_002211097.1;Parent=gene-YPIP275_RS15480;Dbxref=GenBank:WP_002211097.1;Name=WP_002211097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816445.1;locus_tag=YPIP275_RS15480;product=DUF1493 family protein;protein_id=WP_002211097.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 54373 54831 . - . ID=gene-YPIP275_RS15485;Name=YPIP275_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15485;old_locus_tag=YPIP275_2166 NZ_AAOS02000016.1 Protein Homology CDS 54373 54831 . - 0 ID=cds-WP_002211098.1;Parent=gene-YPIP275_RS15485;Dbxref=GenBank:WP_002211098.1;Name=WP_002211098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=YPIP275_RS15485;product=STM2901 family protein;protein_id=WP_002211098.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 55363 56523 . + . ID=gene-YPIP275_RS15490;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=YPIP275_RS15490;old_locus_tag=YPIP275_2167 NZ_AAOS02000016.1 Protein Homology CDS 55363 56523 . + 0 ID=cds-WP_002211099.1;Parent=gene-YPIP275_RS15490;Dbxref=GenBank:WP_002211099.1;Name=WP_002211099.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218135.1;locus_tag=YPIP275_RS15490;product=flagellar biosynthesis protein FlhB;protein_id=WP_002211099.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 56523 58601 . + . ID=gene-YPIP275_RS15495;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=YPIP275_RS15495;old_locus_tag=YPIP275_2168 NZ_AAOS02000016.1 Protein Homology CDS 56523 58601 . + 0 ID=cds-WP_002211100.1;Parent=gene-YPIP275_RS15495;Dbxref=GenBank:WP_002211100.1;Name=WP_002211100.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413652.1;locus_tag=YPIP275_RS15495;product=flagellar biosynthesis protein FlhA;protein_id=WP_002211100.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 58601 59023 . + . ID=gene-YPIP275_RS15500;Name=YPIP275_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15500;old_locus_tag=YPIP275_2169 NZ_AAOS02000016.1 Protein Homology CDS 58601 59023 . + 0 ID=cds-WP_002211101.1;Parent=gene-YPIP275_RS15500;Dbxref=GenBank:WP_002211101.1;Name=WP_002211101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211101.1;locus_tag=YPIP275_RS15500;product=flagellar protein FlhE;protein_id=WP_002211101.1;transl_table=11 NZ_AAOS02000016.1 RefSeq pseudogene 59687 60556 . + . ID=gene-YPIP275_RS15505;Name=inv;end_range=60556,.;gbkey=Gene;gene=inv;gene_biotype=pseudogene;locus_tag=YPIP275_RS15505;partial=true;pseudo=true NZ_AAOS02000016.1 Protein Homology CDS 59687 60556 . + 0 ID=cds-YPIP275_RS15505;Parent=gene-YPIP275_RS15505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=60556,.;gbkey=CDS;gene=inv;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304222.1;locus_tag=YPIP275_RS15505;partial=true;product=inverse autotransporter invasin Inv;pseudo=true;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 60681 61139 . + . ID=gene-YPIP275_RS15510;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS15510;old_locus_tag=YPIP275_2174 NZ_AAOS02000016.1 Protein Homology CDS 60681 61139 . + 0 ID=cds-WP_002213759.1-14;Parent=gene-YPIP275_RS15510;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS15510;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000016.1 RefSeq pseudogene 61247 63301 . + . ID=gene-YPIP275_RS15515;Name=inv;gbkey=Gene;gene=inv;gene_biotype=pseudogene;locus_tag=YPIP275_RS15515;old_locus_tag=YPIP275_2175;partial=true;pseudo=true;start_range=.,61247 NZ_AAOS02000016.1 Protein Homology CDS 61247 63301 . + 0 ID=cds-YPIP275_RS15515;Parent=gene-YPIP275_RS15515;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=inv;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304222.1;locus_tag=YPIP275_RS15515;partial=true;product=inverse autotransporter invasin Inv;pseudo=true;start_range=.,61247;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 63491 63931 . - . ID=gene-YPIP275_RS15520;Name=YPIP275_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15520;old_locus_tag=YPIP275_2176 NZ_AAOS02000016.1 Protein Homology CDS 63491 63931 . - 0 ID=cds-WP_002211107.1;Parent=gene-YPIP275_RS15520;Dbxref=GenBank:WP_002211107.1;Name=WP_002211107.1;Ontology_term=GO:0044780;gbkey=CDS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211107.1;locus_tag=YPIP275_RS15520;product=flagella synthesis protein FlgN;protein_id=WP_002211107.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 63950 64252 . - . ID=gene-YPIP275_RS15525;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=YPIP275_RS15525;old_locus_tag=YPIP275_2177 NZ_AAOS02000016.1 Protein Homology CDS 63950 64252 . - 0 ID=cds-WP_002211108.1;Parent=gene-YPIP275_RS15525;Dbxref=GenBank:WP_002211108.1;Name=WP_002211108.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211108.1;locus_tag=YPIP275_RS15525;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_002211108.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 64403 65101 . - . ID=gene-YPIP275_RS15530;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=YPIP275_RS15530;old_locus_tag=YPIP275_2178 NZ_AAOS02000016.1 Protein Homology CDS 64403 65101 . - 0 ID=cds-WP_002227966.1;Parent=gene-YPIP275_RS15530;Dbxref=GenBank:WP_002227966.1;Name=WP_002227966.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105284.1;locus_tag=YPIP275_RS15530;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_002227966.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 65340 65753 . + . ID=gene-YPIP275_RS15535;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=YPIP275_RS15535;old_locus_tag=YPIP275_2179 NZ_AAOS02000016.1 Protein Homology CDS 65340 65753 . + 0 ID=cds-WP_002211110.1;Parent=gene-YPIP275_RS15535;Dbxref=GenBank:WP_002211110.1;Name=WP_002211110.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392144.1;locus_tag=YPIP275_RS15535;product=flagellar basal body rod protein FlgB;protein_id=WP_002211110.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 65759 66163 . + . ID=gene-YPIP275_RS15540;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=YPIP275_RS15540;old_locus_tag=YPIP275_2180 NZ_AAOS02000016.1 Protein Homology CDS 65759 66163 . + 0 ID=cds-WP_002211111.1;Parent=gene-YPIP275_RS15540;Dbxref=GenBank:WP_002211111.1;Name=WP_002211111.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309479.1;locus_tag=YPIP275_RS15540;product=flagellar basal body rod protein FlgC;protein_id=WP_002211111.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 66178 66855 . + . ID=gene-YPIP275_RS15545;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=YPIP275_RS15545;old_locus_tag=YPIP275_2181 NZ_AAOS02000016.1 Protein Homology CDS 66178 66855 . + 0 ID=cds-WP_002211112.1;Parent=gene-YPIP275_RS15545;Dbxref=GenBank:WP_002211112.1;Name=WP_002211112.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229538.1;locus_tag=YPIP275_RS15545;product=flagellar hook assembly protein FlgD;protein_id=WP_002211112.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 67057 68343 . + . ID=gene-YPIP275_RS15550;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=YPIP275_RS15550;old_locus_tag=YPIP275_2182 NZ_AAOS02000016.1 Protein Homology CDS 67057 68343 . + 0 ID=cds-WP_002211113.1;Parent=gene-YPIP275_RS15550;Dbxref=GenBank:WP_002211113.1;Name=WP_002211113.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211113.1;locus_tag=YPIP275_RS15550;product=flagellar hook protein FlgE;protein_id=WP_002211113.1;transl_table=11 NZ_AAOS02000016.1 RefSeq pseudogene 68365 68979 . + . ID=gene-YPIP275_RS15555;Name=flgF;end_range=68979,.;gbkey=Gene;gene=flgF;gene_biotype=pseudogene;locus_tag=YPIP275_RS15555;old_locus_tag=YPIP275_2183;partial=true;pseudo=true NZ_AAOS02000016.1 Protein Homology CDS 68365 68979 . + 0 ID=cds-YPIP275_RS15555;Parent=gene-YPIP275_RS15555;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=68979,.;gbkey=CDS;gene=flgF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413655.1;locus_tag=YPIP275_RS15555;partial=true;product=flagellar basal body rod protein FlgF;pseudo=true;transl_table=11 NZ_AAOS02000016.1 RefSeq pseudogene 68963 69673 . + . ID=gene-YPIP275_RS15560;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=pseudogene;locus_tag=YPIP275_RS15560;old_locus_tag=YPIP275_2184;partial=true;pseudo=true;start_range=.,68963 NZ_AAOS02000016.1 Protein Homology CDS 68963 69673 . + 0 ID=cds-YPIP275_RS15560;Parent=gene-YPIP275_RS15560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=YPIP275_RS15560;partial=true;product=flagellar basal-body rod protein FlgG;pseudo=true;start_range=.,68963;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 69817 70506 . + . ID=gene-YPIP275_RS15565;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=YPIP275_RS15565;old_locus_tag=YPIP275_2185 NZ_AAOS02000016.1 Protein Homology CDS 69817 70506 . + 0 ID=cds-WP_002211116.1;Parent=gene-YPIP275_RS15565;Dbxref=GenBank:WP_002211116.1;Name=WP_002211116.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211116.1;locus_tag=YPIP275_RS15565;product=flagellar basal body L-ring protein FlgH;protein_id=WP_002211116.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 70521 71630 . + . ID=gene-YPIP275_RS15570;Name=YPIP275_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15570;old_locus_tag=YPIP275_2186 NZ_AAOS02000016.1 Protein Homology CDS 70521 71630 . + 0 ID=cds-WP_002211117.1;Parent=gene-YPIP275_RS15570;Dbxref=GenBank:WP_002211117.1;Name=WP_002211117.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211117.1;locus_tag=YPIP275_RS15570;product=flagellar basal body P-ring protein FlgI;protein_id=WP_002211117.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 71630 72574 . + . ID=gene-YPIP275_RS15575;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS15575;old_locus_tag=YPIP275_2187 NZ_AAOS02000016.1 Protein Homology CDS 71630 72574 . + 0 ID=cds-WP_002211118.1;Parent=gene-YPIP275_RS15575;Dbxref=GenBank:WP_002211118.1;Name=WP_002211118.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229539.1;locus_tag=YPIP275_RS15575;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_002211118.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 73445 75109 . + . ID=gene-YPIP275_RS15580;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=YPIP275_RS15580;old_locus_tag=YPIP275_2188 NZ_AAOS02000016.1 Protein Homology CDS 73445 75109 . + 0 ID=cds-WP_002211119.1;Parent=gene-YPIP275_RS15580;Dbxref=GenBank:WP_002211119.1;Name=WP_002211119.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304220.1;locus_tag=YPIP275_RS15580;product=flagellar hook-associated protein FlgK;protein_id=WP_002211119.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 75248 76228 . + . ID=gene-YPIP275_RS15585;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=YPIP275_RS15585;old_locus_tag=YPIP275_2189 NZ_AAOS02000016.1 Protein Homology CDS 75248 76228 . + 0 ID=cds-WP_002211120.1;Parent=gene-YPIP275_RS15585;Dbxref=GenBank:WP_002211120.1;Name=WP_002211120.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211120.1;locus_tag=YPIP275_RS15585;product=flagellar hook-associated protein FlgL;protein_id=WP_002211120.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 76257 77258 . - . ID=gene-YPIP275_RS15590;Name=YPIP275_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15590;old_locus_tag=YPIP275_2190 NZ_AAOS02000016.1 Protein Homology CDS 76257 77258 . - 0 ID=cds-WP_002211121.1;Parent=gene-YPIP275_RS15590;Dbxref=GenBank:WP_002211121.1;Name=WP_002211121.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211121.1;locus_tag=YPIP275_RS15590;product=sugar-binding transcriptional regulator;protein_id=WP_002211121.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 77476 79542 . + . ID=gene-YPIP275_RS15595;Name=YPIP275_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15595;old_locus_tag=YPIP275_2191 NZ_AAOS02000016.1 Protein Homology CDS 77476 79542 . + 0 ID=cds-WP_002211122.1;Parent=gene-YPIP275_RS15595;Dbxref=GenBank:WP_002211122.1;Name=WP_002211122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211122.1;locus_tag=YPIP275_RS15595;product=bifunctional aldolase/short-chain dehydrogenase;protein_id=WP_002211122.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 79672 80751 . + . ID=gene-YPIP275_RS15600;Name=YPIP275_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15600;old_locus_tag=YPIP275_2193 NZ_AAOS02000016.1 Protein Homology CDS 79672 80751 . + 0 ID=cds-WP_002211124.1;Parent=gene-YPIP275_RS15600;Dbxref=GenBank:WP_002211124.1;Name=WP_002211124.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674240.1;locus_tag=YPIP275_RS15600;product=ABC transporter permease;protein_id=WP_002211124.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 80794 81789 . + . ID=gene-YPIP275_RS15605;Name=YPIP275_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15605;old_locus_tag=YPIP275_2194 NZ_AAOS02000016.1 Protein Homology CDS 80794 81789 . + 0 ID=cds-WP_002211125.1;Parent=gene-YPIP275_RS15605;Dbxref=GenBank:WP_002211125.1;Name=WP_002211125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211125.1;locus_tag=YPIP275_RS15605;product=substrate-binding domain-containing protein;protein_id=WP_002211125.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 81855 83432 . + . ID=gene-YPIP275_RS15610;Name=YPIP275_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15610;old_locus_tag=YPIP275_2195 NZ_AAOS02000016.1 Protein Homology CDS 81855 83432 . + 0 ID=cds-WP_002211126.1;Parent=gene-YPIP275_RS15610;Dbxref=GenBank:WP_002211126.1;Name=WP_002211126.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413661.1;locus_tag=YPIP275_RS15610;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002211126.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 83435 84457 . + . ID=gene-YPIP275_RS15615;Name=YPIP275_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15615;old_locus_tag=YPIP275_2196 NZ_AAOS02000016.1 Protein Homology CDS 83435 84457 . + 0 ID=cds-WP_002214974.1;Parent=gene-YPIP275_RS15615;Dbxref=GenBank:WP_002214974.1;Name=WP_002214974.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192171.1;locus_tag=YPIP275_RS15615;product=ABC transporter permease;protein_id=WP_002214974.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 84506 85465 . + . ID=gene-YPIP275_RS15620;Name=YPIP275_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15620;old_locus_tag=YPIP275_2197 NZ_AAOS02000016.1 Protein Homology CDS 84506 85465 . + 0 ID=cds-WP_002211128.1;Parent=gene-YPIP275_RS15620;Dbxref=GenBank:WP_002211128.1;Name=WP_002211128.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192172.1;locus_tag=YPIP275_RS15620;product=sugar kinase;protein_id=WP_002211128.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 85723 86142 . - . ID=gene-YPIP275_RS15625;Name=YPIP275_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15625;old_locus_tag=YPIP275_2198 NZ_AAOS02000016.1 Protein Homology CDS 85723 86142 . - 0 ID=cds-WP_002211129.1;Parent=gene-YPIP275_RS15625;Dbxref=GenBank:WP_002211129.1;Name=WP_002211129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211129.1;locus_tag=YPIP275_RS15625;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_002211129.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 86187 86369 . - . ID=gene-YPIP275_RS15630;Name=YPIP275_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15630 NZ_AAOS02000016.1 Protein Homology CDS 86187 86369 . - 0 ID=cds-WP_002214976.1;Parent=gene-YPIP275_RS15630;Dbxref=GenBank:WP_002214976.1;Name=WP_002214976.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214976.1;locus_tag=YPIP275_RS15630;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_002214976.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 86576 87358 . - . ID=gene-YPIP275_RS15635;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=YPIP275_RS15635;old_locus_tag=YPIP275_2199 NZ_AAOS02000016.1 Protein Homology CDS 86576 87358 . - 0 ID=cds-WP_002211130.1;Parent=gene-YPIP275_RS15635;Dbxref=GenBank:WP_002211130.1;Name=WP_002211130.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211130.1;locus_tag=YPIP275_RS15635;product=flagellar biosynthetic protein FliR;protein_id=WP_002211130.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 87361 87630 . - . ID=gene-YPIP275_RS15640;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS15640;old_locus_tag=YPIP275_2200 NZ_AAOS02000016.1 Protein Homology CDS 87361 87630 . - 0 ID=cds-WP_002211131.1;Parent=gene-YPIP275_RS15640;Dbxref=GenBank:WP_002211131.1;Name=WP_002211131.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211131.1;locus_tag=YPIP275_RS15640;product=flagellar biosynthesis protein FliQ;protein_id=WP_002211131.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 87736 88476 . - . ID=gene-YPIP275_RS15645;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=YPIP275_RS15645;old_locus_tag=YPIP275_2201 NZ_AAOS02000016.1 Protein Homology CDS 87736 88476 . - 0 ID=cds-WP_002220494.1;Parent=gene-YPIP275_RS15645;Dbxref=GenBank:WP_002220494.1;Name=WP_002220494.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220494.1;locus_tag=YPIP275_RS15645;product=flagellar type III secretion system pore protein FliP;protein_id=WP_002220494.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 88557 89093 . - . ID=gene-YPIP275_RS15650;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=YPIP275_RS15650;old_locus_tag=YPIP275_2202 NZ_AAOS02000016.1 Protein Homology CDS 88557 89093 . - 0 ID=cds-WP_002211133.1;Parent=gene-YPIP275_RS15650;Dbxref=GenBank:WP_002211133.1;Name=WP_002211133.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231108.1;locus_tag=YPIP275_RS15650;product=flagellar biosynthetic protein FliO;protein_id=WP_002211133.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 89093 89509 . - . ID=gene-YPIP275_RS15655;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=YPIP275_RS15655;old_locus_tag=YPIP275_2203 NZ_AAOS02000016.1 Protein Homology CDS 89093 89509 . - 0 ID=cds-WP_002211134.1;Parent=gene-YPIP275_RS15655;Dbxref=GenBank:WP_002211134.1;Name=WP_002211134.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004961501.1;locus_tag=YPIP275_RS15655;product=flagellar motor switch protein FliN;protein_id=WP_002211134.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 89506 90507 . - . ID=gene-YPIP275_RS15660;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=YPIP275_RS15660;old_locus_tag=YPIP275_2204 NZ_AAOS02000016.1 Protein Homology CDS 89506 90507 . - 0 ID=cds-WP_002211135.1;Parent=gene-YPIP275_RS15660;Dbxref=GenBank:WP_002211135.1;Name=WP_002211135.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=YPIP275_RS15660;product=flagellar motor switch protein FliM;protein_id=WP_002211135.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 90513 90983 . - . ID=gene-YPIP275_RS15665;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=YPIP275_RS15665;old_locus_tag=YPIP275_2205 NZ_AAOS02000016.1 Protein Homology CDS 90513 90983 . - 0 ID=cds-WP_002227961.1;Parent=gene-YPIP275_RS15665;Dbxref=GenBank:WP_002227961.1;Name=WP_002227961.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700936.1;locus_tag=YPIP275_RS15665;product=flagellar basal body-associated protein FliL;protein_id=WP_002227961.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 91250 92602 . - . ID=gene-YPIP275_RS15670;Name=YPIP275_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15670;old_locus_tag=YPIP275_2207 NZ_AAOS02000016.1 Protein Homology CDS 91250 92602 . - 0 ID=cds-WP_002211138.1;Parent=gene-YPIP275_RS15670;Dbxref=GenBank:WP_002211138.1;Name=WP_002211138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413663.1;locus_tag=YPIP275_RS15670;product=flagellar hook-length control protein FliK;protein_id=WP_002211138.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 92599 93045 . - . ID=gene-YPIP275_RS15675;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS15675;old_locus_tag=YPIP275_2208 NZ_AAOS02000016.1 Protein Homology CDS 92599 93045 . - 0 ID=cds-WP_002211139.1;Parent=gene-YPIP275_RS15675;Dbxref=GenBank:WP_002211139.1;Name=WP_002211139.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304216.1;locus_tag=YPIP275_RS15675;product=flagellar export protein FliJ;protein_id=WP_002211139.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 93145 94599 . - . ID=gene-YPIP275_RS15680;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=YPIP275_RS15680;old_locus_tag=YPIP275_2209 NZ_AAOS02000016.1 Protein Homology CDS 93145 94599 . - 0 ID=cds-WP_002211140.1;Parent=gene-YPIP275_RS15680;Dbxref=GenBank:WP_002211140.1;Name=WP_002211140.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211140.1;locus_tag=YPIP275_RS15680;product=flagellar protein export ATPase FliI;protein_id=WP_002211140.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 94562 95278 . - . ID=gene-YPIP275_RS15685;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=YPIP275_RS15685;old_locus_tag=YPIP275_2210 NZ_AAOS02000016.1 Protein Homology CDS 94562 95278 . - 0 ID=cds-WP_002211141.1;Parent=gene-YPIP275_RS15685;Dbxref=GenBank:WP_002211141.1;Name=WP_002211141.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211141.1;locus_tag=YPIP275_RS15685;product=flagellar assembly protein FliH;protein_id=WP_002211141.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 95271 96263 . - . ID=gene-YPIP275_RS15690;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=YPIP275_RS15690;old_locus_tag=YPIP275_2211 NZ_AAOS02000016.1 Protein Homology CDS 95271 96263 . - 0 ID=cds-WP_002211142.1;Parent=gene-YPIP275_RS15690;Dbxref=GenBank:WP_002211142.1;Name=WP_002211142.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211142.1;locus_tag=YPIP275_RS15690;product=flagellar motor switch protein FliG;protein_id=WP_002211142.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 96260 97972 . - . ID=gene-YPIP275_RS15695;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=YPIP275_RS15695;old_locus_tag=YPIP275_2212 NZ_AAOS02000016.1 Protein Homology CDS 96260 97972 . - 0 ID=cds-WP_002211143.1;Parent=gene-YPIP275_RS15695;Dbxref=GenBank:WP_002211143.1;Name=WP_002211143.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016588484.1;locus_tag=YPIP275_RS15695;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_002211143.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 98325 98636 . + . ID=gene-YPIP275_RS15700;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=YPIP275_RS15700;old_locus_tag=YPIP275_2213 NZ_AAOS02000016.1 Protein Homology CDS 98325 98636 . + 0 ID=cds-WP_002211144.1;Parent=gene-YPIP275_RS15700;Dbxref=GenBank:WP_002211144.1;Name=WP_002211144.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005160376.1;locus_tag=YPIP275_RS15700;product=flagellar hook-basal body complex protein FliE;protein_id=WP_002211144.1;transl_table=11 NZ_AAOS02000016.1 RefSeq pseudogene 98732 98902 . + . ID=gene-YPIP275_RS27545;Name=YPIP275_RS27545;end_range=98902,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS27545;partial=true;pseudo=true;start_range=.,98732 NZ_AAOS02000016.1 Protein Homology CDS 98732 98902 . + 0 ID=cds-YPIP275_RS27545;Parent=gene-YPIP275_RS27545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=98902,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211708.1;locus_tag=YPIP275_RS27545;partial=true;product=peptidase P60;pseudo=true;start_range=.,98732;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 99056 99235 . + . ID=gene-YPIP275_RS15705;Name=YPIP275_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15705 NZ_AAOS02000016.1 Protein Homology CDS 99056 99235 . + 0 ID=cds-WP_002215991.1;Parent=gene-YPIP275_RS15705;Dbxref=GenBank:WP_002215991.1;Name=WP_002215991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156674.1;locus_tag=YPIP275_RS15705;product=hypothetical protein;protein_id=WP_002215991.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 99246 99722 . + . ID=gene-YPIP275_RS15710;Name=YPIP275_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15710 NZ_AAOS02000016.1 Protein Homology CDS 99246 99722 . + 0 ID=cds-WP_002215992.1;Parent=gene-YPIP275_RS15710;Dbxref=GenBank:WP_002215992.1;Name=WP_002215992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215992.1;locus_tag=YPIP275_RS15710;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_002215992.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 99908 100519 . - . ID=gene-YPIP275_RS15715;Name=YPIP275_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15715;old_locus_tag=YPIP275_2214 NZ_AAOS02000016.1 Protein Homology CDS 99908 100519 . - 0 ID=cds-WP_002211145.1;Parent=gene-YPIP275_RS15715;Dbxref=GenBank:WP_002211145.1;Name=WP_002211145.1;Ontology_term=GO:0006281,GO:0019104,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211145.1;locus_tag=YPIP275_RS15715;product=DNA-3-methyladenine glycosylase family protein;protein_id=WP_002211145.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 100680 101573 . - . ID=gene-YPIP275_RS15720;Name=YPIP275_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15720 NZ_AAOS02000016.1 Protein Homology CDS 100680 101573 . - 0 ID=cds-WP_002403635.1;Parent=gene-YPIP275_RS15720;Dbxref=GenBank:WP_002403635.1;Name=WP_002403635.1;Ontology_term=GO:0004112,GO:0046872;gbkey=CDS;go_function=cyclic-nucleotide phosphodiesterase activity|0004112||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002403635.1;locus_tag=YPIP275_RS15720;product=HD-GYP domain-containing protein;protein_id=WP_002403635.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 101722 103635 . - . ID=gene-YPIP275_RS15725;Name=YPIP275_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15725 NZ_AAOS02000016.1 Protein Homology CDS 101722 103635 . - 0 ID=cds-WP_002229284.1;Parent=gene-YPIP275_RS15725;Dbxref=GenBank:WP_002229284.1;Name=WP_002229284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228541.1;locus_tag=YPIP275_RS15725;product=hypothetical protein;protein_id=WP_002229284.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 103989 104864 . - . ID=gene-YPIP275_RS15730;Name=YPIP275_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15730;old_locus_tag=YPIP275_2217 NZ_AAOS02000016.1 Protein Homology CDS 103989 104864 . - 0 ID=cds-WP_002211147.1;Parent=gene-YPIP275_RS15730;Dbxref=GenBank:WP_002211147.1;Name=WP_002211147.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211147.1;locus_tag=YPIP275_RS15730;product=helix-turn-helix transcriptional regulator;protein_id=WP_002211147.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 105165 105527 . - . ID=gene-YPIP275_RS15740;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=YPIP275_RS15740;old_locus_tag=YPIP275_2218 NZ_AAOS02000016.1 Protein Homology CDS 105165 105527 . - 0 ID=cds-WP_002211148.1;Parent=gene-YPIP275_RS15740;Dbxref=GenBank:WP_002211148.1;Name=WP_002211148.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816593.1;locus_tag=YPIP275_RS15740;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_002211148.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 105538 105936 . - . ID=gene-YPIP275_RS15745;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=YPIP275_RS15745;old_locus_tag=YPIP275_2219 NZ_AAOS02000016.1 Protein Homology CDS 105538 105936 . - 0 ID=cds-WP_002211149.1;Parent=gene-YPIP275_RS15745;Dbxref=GenBank:WP_002211149.1;Name=WP_002211149.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211149.1;locus_tag=YPIP275_RS15745;product=flagellar export chaperone FliS;protein_id=WP_002211149.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 105947 107347 . - . ID=gene-YPIP275_RS15750;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=YPIP275_RS15750;old_locus_tag=YPIP275_2220 NZ_AAOS02000016.1 Protein Homology CDS 105947 107347 . - 0 ID=cds-WP_002211150.1;Parent=gene-YPIP275_RS15750;Dbxref=GenBank:WP_002211150.1;Name=WP_002211150.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211150.1;locus_tag=YPIP275_RS15750;product=flagellar filament capping protein FliD;protein_id=WP_002211150.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 107644 108753 . + . ID=gene-YPIP275_RS15755;Name=YPIP275_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15755;old_locus_tag=YPIP275_2222 NZ_AAOS02000016.1 Protein Homology CDS 107644 108753 . + 0 ID=cds-WP_002211152.1;Parent=gene-YPIP275_RS15755;Dbxref=GenBank:WP_002211152.1;Name=WP_002211152.1;Ontology_term=GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231111.1;locus_tag=YPIP275_RS15755;product=FliC/FljB family flagellin;protein_id=WP_002211152.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 109100 109822 . + . ID=gene-YPIP275_RS15760;Name=YPIP275_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15760;old_locus_tag=YPIP275_2223 NZ_AAOS02000016.1 Protein Homology CDS 109100 109822 . + 0 ID=cds-WP_002211153.1;Parent=gene-YPIP275_RS15760;Dbxref=GenBank:WP_002211153.1;Name=WP_002211153.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192188.1;locus_tag=YPIP275_RS15760;product=RNA polymerase sigma factor FliA;protein_id=WP_002211153.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 110044 110553 . + . ID=gene-YPIP275_RS15765;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=YPIP275_RS15765;old_locus_tag=YPIP275_2224 NZ_AAOS02000016.1 Protein Homology CDS 110044 110553 . + 0 ID=cds-WP_002211154.1;Parent=gene-YPIP275_RS15765;Dbxref=GenBank:WP_002211154.1;Name=WP_002211154.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211154.1;locus_tag=YPIP275_RS15765;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_002211154.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 110815 111834 . + . ID=gene-YPIP275_RS15770;Name=YPIP275_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15770;old_locus_tag=YPIP275_2226 NZ_AAOS02000016.1 Protein Homology CDS 110815 111834 . + 0 ID=cds-WP_002211155.1;Parent=gene-YPIP275_RS15770;Dbxref=GenBank:WP_002211155.1;Name=WP_002211155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649714.1;locus_tag=YPIP275_RS15770;product=D-cysteine desulfhydrase;protein_id=WP_002211155.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 111958 112758 . + . ID=gene-YPIP275_RS15775;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS15775;old_locus_tag=YPIP275_2227 NZ_AAOS02000016.1 Protein Homology CDS 111958 112758 . + 0 ID=cds-WP_002211157.1;Parent=gene-YPIP275_RS15775;Dbxref=GenBank:WP_002211157.1;Name=WP_002211157.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211157.1;locus_tag=YPIP275_RS15775;product=cystine ABC transporter substrate-binding protein;protein_id=WP_002211157.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 112758 113420 . + . ID=gene-YPIP275_RS15780;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=YPIP275_RS15780;old_locus_tag=YPIP275_2228 NZ_AAOS02000016.1 Protein Homology CDS 112758 113420 . + 0 ID=cds-WP_002211158.1;Parent=gene-YPIP275_RS15780;Dbxref=GenBank:WP_002211158.1;Name=WP_002211158.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304211.1;locus_tag=YPIP275_RS15780;product=cystine ABC transporter permease;protein_id=WP_002211158.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 113423 114184 . + . ID=gene-YPIP275_RS15785;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=YPIP275_RS15785;old_locus_tag=YPIP275_2229 NZ_AAOS02000016.1 Protein Homology CDS 113423 114184 . + 0 ID=cds-WP_002211159.1;Parent=gene-YPIP275_RS15785;Dbxref=GenBank:WP_002211159.1;Name=WP_002211159.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060329.1;locus_tag=YPIP275_RS15785;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_002211159.1;transl_table=11 NZ_AAOS02000016.1 RefSeq pseudogene 114270 114338 . + . ID=gene-YPIP275_RS28805;Name=YPIP275_RS28805;end_range=114338,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28805;partial=true;pseudo=true NZ_AAOS02000016.1 Protein Homology CDS 114270 114338 . + 0 ID=cds-YPIP275_RS28805;Parent=gene-YPIP275_RS28805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=114338,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378124.1;locus_tag=YPIP275_RS28805;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 114476 114814 . - . ID=gene-YPIP275_RS15790;Name=YPIP275_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15790;old_locus_tag=YPIP275_2231 NZ_AAOS02000016.1 Protein Homology CDS 114476 114814 . - 0 ID=cds-WP_002216048.1;Parent=gene-YPIP275_RS15790;Dbxref=GenBank:WP_002216048.1;Name=WP_002216048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216048.1;locus_tag=YPIP275_RS15790;product=HVO_A0114 family putative DNA-binding protein;protein_id=WP_002216048.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 114848 115141 . - . ID=gene-YPIP275_RS15795;Name=YPIP275_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15795;old_locus_tag=YPIP275_2232 NZ_AAOS02000016.1 Protein Homology CDS 114848 115141 . - 0 ID=cds-WP_002211161.1;Parent=gene-YPIP275_RS15795;Dbxref=GenBank:WP_002211161.1;Name=WP_002211161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002395099.1;locus_tag=YPIP275_RS15795;product=toxin-antitoxin system TumE family protein;protein_id=WP_002211161.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 115647 119618 . - . ID=gene-YPIP275_RS15800;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=YPIP275_RS15800;old_locus_tag=YPIP275_2233 NZ_AAOS02000016.1 Protein Homology CDS 115647 119618 . - 0 ID=cds-WP_002211162.1;Parent=gene-YPIP275_RS15800;Dbxref=GenBank:WP_002211162.1;Name=WP_002211162.1;Ontology_term=GO:0006355,GO:0055129,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211162.1;locus_tag=YPIP275_RS15800;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_002211162.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 119963 120160 . + . ID=gene-YPIP275_RS15805;Name=YPIP275_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15805;old_locus_tag=YPIP275_2234 NZ_AAOS02000016.1 Protein Homology CDS 119963 120160 . + 0 ID=cds-WP_002211163.1;Parent=gene-YPIP275_RS15805;Dbxref=GenBank:WP_002211163.1;Name=WP_002211163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211163.1;locus_tag=YPIP275_RS15805;product=hypothetical protein;protein_id=WP_002211163.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 120190 121674 . + . ID=gene-YPIP275_RS15810;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=YPIP275_RS15810;old_locus_tag=YPIP275_2235 NZ_AAOS02000016.1 Protein Homology CDS 120190 121674 . + 0 ID=cds-WP_002211164.1;Parent=gene-YPIP275_RS15810;Dbxref=GenBank:WP_002211164.1;Name=WP_002211164.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392689.1;locus_tag=YPIP275_RS15810;product=sodium/proline symporter PutP;protein_id=WP_002211164.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 122007 122855 . + . ID=gene-YPIP275_RS15815;Name=efeU;gbkey=Gene;gene=efeU;gene_biotype=protein_coding;locus_tag=YPIP275_RS15815;old_locus_tag=YPIP275_2236 NZ_AAOS02000016.1 Protein Homology CDS 122007 122855 . + 0 ID=cds-WP_002211165.1;Parent=gene-YPIP275_RS15815;Dbxref=GenBank:WP_002211165.1;Name=WP_002211165.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;gene=efeU;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105266.1;locus_tag=YPIP275_RS15815;product=iron uptake transporter permease EfeU;protein_id=WP_002211165.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 122885 124015 . + . ID=gene-YPIP275_RS15820;Name=efeO;gbkey=Gene;gene=efeO;gene_biotype=protein_coding;gene_synonym=efeM,ywbM;locus_tag=YPIP275_RS15820;old_locus_tag=YPIP275_2237 NZ_AAOS02000016.1 Protein Homology CDS 122885 124015 . + 0 ID=cds-WP_002211166.1;Parent=gene-YPIP275_RS15820;Dbxref=GenBank:WP_002211166.1;Name=WP_002211166.1;Ontology_term=GO:0006826;gbkey=CDS;gene=efeO;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211166.1;locus_tag=YPIP275_RS15820;product=iron uptake system protein EfeO;protein_id=WP_002211166.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 124026 125330 . + . ID=gene-YPIP275_RS15825;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=YPIP275_RS15825;old_locus_tag=YPIP275_2238 NZ_AAOS02000016.1 Protein Homology CDS 124026 125330 . + 0 ID=cds-WP_002211167.1;Parent=gene-YPIP275_RS15825;Dbxref=GenBank:WP_002211167.1;Name=WP_002211167.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211167.1;locus_tag=YPIP275_RS15825;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_002211167.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 125416 126015 . - . ID=gene-YPIP275_RS15830;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=YPIP275_RS15830;old_locus_tag=YPIP275_2239 NZ_AAOS02000016.1 Protein Homology CDS 125416 126015 . - 0 ID=cds-WP_002211168.1;Parent=gene-YPIP275_RS15830;Dbxref=GenBank:WP_002211168.1;Name=WP_002211168.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211168.1;locus_tag=YPIP275_RS15830;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_002211168.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 126409 127587 . + . ID=gene-YPIP275_RS15835;Name=YPIP275_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15835;old_locus_tag=YPIP275_2240 NZ_AAOS02000016.1 Protein Homology CDS 126409 127587 . + 0 ID=cds-WP_002211169.1;Parent=gene-YPIP275_RS15835;Dbxref=GenBank:WP_002211169.1;Name=WP_002211169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016261797.1;locus_tag=YPIP275_RS15835;product=N-acetylneuraminate epimerase;protein_id=WP_002211169.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 127713 129128 . - . ID=gene-YPIP275_RS15840;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=YPIP275_RS15840;old_locus_tag=YPIP275_2241 NZ_AAOS02000016.1 Protein Homology CDS 127713 129128 . - 0 ID=cds-WP_002211170.1;Parent=gene-YPIP275_RS15840;Dbxref=GenBank:WP_002211170.1;Name=WP_002211170.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211170.1;locus_tag=YPIP275_RS15840;product=D-serine/D-alanine/glycine transporter;protein_id=WP_002211170.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 129490 129565 . + . ID=gene-YPIP275_RS15845;Name=YPIP275_RS15845;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS15845;old_locus_tag=YPIP275_2242 NZ_AAOS02000016.1 tRNAscan-SE tRNA 129490 129565 . + . ID=rna-YPIP275_RS15845;Parent=gene-YPIP275_RS15845;anticodon=(pos:129523..129525);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS15845;product=tRNA-Lys NZ_AAOS02000016.1 tRNAscan-SE exon 129490 129565 . + . ID=exon-YPIP275_RS15845-1;Parent=rna-YPIP275_RS15845;anticodon=(pos:129523..129525);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS15845;product=tRNA-Lys NZ_AAOS02000016.1 RefSeq gene 130252 130803 . + . ID=gene-YPIP275_RS15850;Name=YPIP275_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15850;old_locus_tag=YPIP275_2244 NZ_AAOS02000016.1 Protein Homology CDS 130252 130803 . + 0 ID=cds-WP_002211172.1;Parent=gene-YPIP275_RS15850;Dbxref=GenBank:WP_002211172.1;Name=WP_002211172.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211172.1;locus_tag=YPIP275_RS15850;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_002211172.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 131143 131397 . + . ID=gene-YPIP275_RS15860;Name=YPIP275_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15860;old_locus_tag=YPIP275_2245 NZ_AAOS02000016.1 Protein Homology CDS 131143 131397 . + 0 ID=cds-WP_002211173.1;Parent=gene-YPIP275_RS15860;Dbxref=GenBank:WP_002211173.1;Name=WP_002211173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211173.1;locus_tag=YPIP275_RS15860;product=hypothetical protein;protein_id=WP_002211173.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 131425 131766 . - . ID=gene-YPIP275_RS15865;Name=YPIP275_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15865;old_locus_tag=YPIP275_2246 NZ_AAOS02000016.1 Protein Homology CDS 131425 131766 . - 0 ID=cds-WP_002218408.1;Parent=gene-YPIP275_RS15865;Dbxref=GenBank:WP_002218408.1;Name=WP_002218408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218408.1;locus_tag=YPIP275_RS15865;product=GlpM family protein;protein_id=WP_002218408.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 131894 132118 . - . ID=gene-YPIP275_RS15870;Name=YPIP275_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15870;old_locus_tag=YPIP275_2247 NZ_AAOS02000016.1 Protein Homology CDS 131894 132118 . - 0 ID=cds-WP_002211175.1;Parent=gene-YPIP275_RS15870;Dbxref=GenBank:WP_002211175.1;Name=WP_002211175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127733.1;locus_tag=YPIP275_RS15870;product=DUF2594 family protein;protein_id=WP_002211175.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 132781 133437 . + . ID=gene-YPIP275_RS15875;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=YPIP275_RS15875;old_locus_tag=YPIP275_2248 NZ_AAOS02000016.1 Protein Homology CDS 132781 133437 . + 0 ID=cds-WP_002211176.1;Parent=gene-YPIP275_RS15875;Dbxref=GenBank:WP_002211176.1;Name=WP_002211176.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008813142.1;locus_tag=YPIP275_RS15875;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_002211176.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 133430 135262 . + . ID=gene-YPIP275_RS15880;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=YPIP275_RS15880;old_locus_tag=YPIP275_2249 NZ_AAOS02000016.1 Protein Homology CDS 133430 135262 . + 0 ID=cds-WP_002220477.1;Parent=gene-YPIP275_RS15880;Dbxref=GenBank:WP_002220477.1;Name=WP_002220477.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310678.2;locus_tag=YPIP275_RS15880;product=excinuclease ABC subunit UvrC;protein_id=WP_002220477.1;transl_table=11 NZ_AAOS02000016.1 RefSeq gene 135321 135812 . + . ID=gene-YPIP275_RS15885;Name=pgsA;end_range=135812,.;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=YPIP275_RS15885;old_locus_tag=YPIP275_2250;partial=true NZ_AAOS02000016.1 Protein Homology CDS 135321 135812 . + 0 ID=cds-WP_043940358.1;Parent=gene-YPIP275_RS15885;Dbxref=GenBank:WP_043940358.1;Name=WP_043940358.1;end_range=135812,.;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080796.1;locus_tag=YPIP275_RS15885;partial=true;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_043940358.1;transl_table=11 ##sequence-region NZ_AAOS02000015.1 1 136000 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000015.1 RefSeq region 1 136000 . + . ID=NZ_AAOS02000015.1:1..136000;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000015.1 RefSeq gene 287 1699 . - . ID=gene-YPIP275_RS14550;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=YPIP275_RS14550;old_locus_tag=YPIP275_2657 NZ_AAOS02000015.1 Protein Homology CDS 287 1699 . - 0 ID=cds-WP_002210936.1;Parent=gene-YPIP275_RS14550;Dbxref=GenBank:WP_002210936.1;Name=WP_002210936.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=YPIP275_RS14550;product=pyruvate kinase PykF;protein_id=WP_002210936.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 2275 2351 . - . ID=gene-YPIP275_RS14555;Name=YPIP275_RS14555;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS14555;old_locus_tag=YPIP275_2658 NZ_AAOS02000015.1 tRNAscan-SE tRNA 2275 2351 . - . ID=rna-YPIP275_RS14555;Parent=gene-YPIP275_RS14555;anticodon=(pos:complement(2315..2317));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS14555;product=tRNA-Val NZ_AAOS02000015.1 tRNAscan-SE exon 2275 2351 . - . ID=exon-YPIP275_RS14555-1;Parent=rna-YPIP275_RS14555;anticodon=(pos:complement(2315..2317));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS14555;product=tRNA-Val NZ_AAOS02000015.1 RefSeq gene 2411 2487 . - . ID=gene-YPIP275_RS14560;Name=YPIP275_RS14560;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS14560;old_locus_tag=YPIP275_2659 NZ_AAOS02000015.1 tRNAscan-SE tRNA 2411 2487 . - . ID=rna-YPIP275_RS14560;Parent=gene-YPIP275_RS14560;anticodon=(pos:complement(2451..2453));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS14560;product=tRNA-Val NZ_AAOS02000015.1 tRNAscan-SE exon 2411 2487 . - . ID=exon-YPIP275_RS14560-1;Parent=rna-YPIP275_RS14560;anticodon=(pos:complement(2451..2453));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS14560;product=tRNA-Val NZ_AAOS02000015.1 RefSeq gene 2730 4103 . - . ID=gene-YPIP275_RS14565;Name=YPIP275_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14565;old_locus_tag=YPIP275_2660 NZ_AAOS02000015.1 Protein Homology CDS 2730 4103 . - 0 ID=cds-WP_002210937.1;Parent=gene-YPIP275_RS14565;Dbxref=GenBank:WP_002210937.1;Name=WP_002210937.1;Ontology_term=GO:0006855,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105030.1;locus_tag=YPIP275_RS14565;product=MATE family efflux transporter;protein_id=WP_002210937.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 4116 4307 . - . ID=gene-YPIP275_RS27495;Name=YPIP275_RS27495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27495;old_locus_tag=YPIP275_2661 NZ_AAOS02000015.1 Protein Homology CDS 4116 4307 . - 0 ID=cds-WP_002210938.1;Parent=gene-YPIP275_RS27495;Dbxref=GenBank:WP_002210938.1;Name=WP_002210938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210938.1;locus_tag=YPIP275_RS27495;product=hypothetical protein;protein_id=WP_002210938.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 4352 5008 . + . ID=gene-YPIP275_RS14570;Name=YPIP275_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14570;old_locus_tag=YPIP275_2662 NZ_AAOS02000015.1 Protein Homology CDS 4352 5008 . + 0 ID=cds-WP_002210939.1;Parent=gene-YPIP275_RS14570;Dbxref=GenBank:WP_002210939.1;Name=WP_002210939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210939.1;locus_tag=YPIP275_RS14570;product=riboflavin synthase;protein_id=WP_002210939.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 5059 6210 . - . ID=gene-YPIP275_RS14575;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=YPIP275_RS14575;old_locus_tag=YPIP275_2663 NZ_AAOS02000015.1 Protein Homology CDS 5059 6210 . - 0 ID=cds-WP_002210940.1;Parent=gene-YPIP275_RS14575;Dbxref=GenBank:WP_002210940.1;Name=WP_002210940.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230931.1;locus_tag=YPIP275_RS14575;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_002210940.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 6690 7892 . - . ID=gene-YPIP275_RS14580;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=YPIP275_RS14580;old_locus_tag=YPIP275_2664 NZ_AAOS02000015.1 Protein Homology CDS 6690 7892 . - 0 ID=cds-WP_002210941.1;Parent=gene-YPIP275_RS14580;Dbxref=GenBank:WP_002210941.1;Name=WP_002210941.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210941.1;locus_tag=YPIP275_RS14580;product=purine nucleoside transporter PunC;protein_id=WP_002210941.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 8182 9114 . + . ID=gene-YPIP275_RS14585;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=YPIP275_RS14585;old_locus_tag=YPIP275_2665 NZ_AAOS02000015.1 Protein Homology CDS 8182 9114 . + 0 ID=cds-WP_002210942.1;Parent=gene-YPIP275_RS14585;Dbxref=GenBank:WP_002210942.1;Name=WP_002210942.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192531.1;locus_tag=YPIP275_RS14585;product=DNA-binding transcriptional activator PunR;protein_id=WP_002210942.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 9203 10228 . - . ID=gene-YPIP275_RS14590;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=YPIP275_RS14590;old_locus_tag=YPIP275_2666 NZ_AAOS02000015.1 Protein Homology CDS 9203 10228 . - 0 ID=cds-WP_002210943.1;Parent=gene-YPIP275_RS14590;Dbxref=GenBank:WP_002210943.1;Name=WP_002210943.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=YPIP275_RS14590;product=HTH-type transcriptional repressor PurR;protein_id=WP_002210943.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 10562 10651 . + . ID=gene-YPIP275_RS28780;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=YPIP275_RS28780 NZ_AAOS02000015.1 Protein Homology CDS 10562 10651 . + 0 ID=cds-WP_002216285.1;Parent=gene-YPIP275_RS28780;Dbxref=GenBank:WP_002216285.1;Name=WP_002216285.1;gbkey=CDS;gene=cydH;inference=COORDINATES: protein motif:HMM:NF033411.1;locus_tag=YPIP275_RS28780;product=cytochrome bd-I oxidase subunit CydH;protein_id=WP_002216285.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 10755 11333 . - . ID=gene-YPIP275_RS14595;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=YPIP275_RS14595;old_locus_tag=YPIP275_2667 NZ_AAOS02000015.1 Protein Homology CDS 10755 11333 . - 0 ID=cds-WP_002210944.1;Parent=gene-YPIP275_RS14595;Dbxref=GenBank:WP_002210944.1;Name=WP_002210944.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210944.1;locus_tag=YPIP275_RS14595;product=superoxide dismutase [Fe];protein_id=WP_002210944.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 11711 12562 . - . ID=gene-YPIP275_RS14600;Name=YPIP275_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14600;old_locus_tag=YPIP275_2668 NZ_AAOS02000015.1 Protein Homology CDS 11711 12562 . - 0 ID=cds-WP_002210945.1;Parent=gene-YPIP275_RS14600;Dbxref=GenBank:WP_002210945.1;Name=WP_002210945.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906186.1;locus_tag=YPIP275_RS14600;product=C40 family peptidase;protein_id=WP_002210945.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 13002 13352 . + . ID=gene-YPIP275_RS14610;Name=YPIP275_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14610;old_locus_tag=YPIP275_2669 NZ_AAOS02000015.1 Protein Homology CDS 13002 13352 . + 0 ID=cds-WP_002210946.1;Parent=gene-YPIP275_RS14610;Dbxref=GenBank:WP_002210946.1;Name=WP_002210946.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005184480.1;locus_tag=YPIP275_RS14610;product=Grx4 family monothiol glutaredoxin;protein_id=WP_002210946.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 13551 13646 . + . ID=gene-YPIP275_RS28785;Name=YPIP275_RS28785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28785 NZ_AAOS02000015.1 Protein Homology CDS 13551 13646 . + 0 ID=cds-WP_087768161.1;Parent=gene-YPIP275_RS28785;Dbxref=GenBank:WP_087768161.1;Name=WP_087768161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=YPIP275_RS28785;product=gluconate 5-dehydrogenase;protein_id=WP_087768161.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 13661 14308 . - . ID=gene-YPIP275_RS14615;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=YPIP275_RS14615;old_locus_tag=YPIP275_2670 NZ_AAOS02000015.1 Protein Homology CDS 13661 14308 . - 0 ID=cds-WP_002227904.1;Parent=gene-YPIP275_RS14615;Dbxref=GenBank:WP_002227904.1;Name=WP_002227904.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227904.1;locus_tag=YPIP275_RS14615;product=ribonuclease T;protein_id=WP_002227904.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 14420 14827 . - . ID=gene-YPIP275_RS14620;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14620;old_locus_tag=YPIP275_2671 NZ_AAOS02000015.1 Protein Homology CDS 14420 14827 . - 0 ID=cds-WP_002210948.1;Parent=gene-YPIP275_RS14620;Dbxref=GenBank:WP_002210948.1;Name=WP_002210948.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210948.1;locus_tag=YPIP275_RS14620;product=lactoylglutathione lyase;protein_id=WP_002210948.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 15100 18054 . + . ID=gene-YPIP275_RS14625;Name=YPIP275_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14625;old_locus_tag=YPIP275_2672 NZ_AAOS02000015.1 Protein Homology CDS 15100 18054 . + 0 ID=cds-WP_002210949.1;Parent=gene-YPIP275_RS14625;Dbxref=GenBank:WP_002210949.1;Name=WP_002210949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210949.1;locus_tag=YPIP275_RS14625;product=RHS repeat-associated core domain-containing protein;protein_id=WP_002210949.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 18275 19372 . - . ID=gene-YPIP275_RS14630;Name=YPIP275_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14630;old_locus_tag=YPIP275_2673 NZ_AAOS02000015.1 Protein Homology CDS 18275 19372 . - 0 ID=cds-WP_002210950.1;Parent=gene-YPIP275_RS14630;Dbxref=GenBank:WP_002210950.1;Name=WP_002210950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700229.1;locus_tag=YPIP275_RS14630;product=alkene reductase;protein_id=WP_002210950.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 19460 20059 . - . ID=gene-YPIP275_RS14635;Name=YPIP275_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14635;old_locus_tag=YPIP275_2674 NZ_AAOS02000015.1 Protein Homology CDS 19460 20059 . - 0 ID=cds-WP_002210951.1;Parent=gene-YPIP275_RS14635;Dbxref=GenBank:WP_002210951.1;Name=WP_002210951.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210951.1;locus_tag=YPIP275_RS14635;product=TetR/AcrR family transcriptional regulator;protein_id=WP_002210951.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 20282 21919 . - . ID=gene-YPIP275_RS14640;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14640;old_locus_tag=YPIP275_2675 NZ_AAOS02000015.1 Protein Homology CDS 20282 21919 . - 0 ID=cds-WP_002210952.1;Parent=gene-YPIP275_RS14640;Dbxref=GenBank:WP_002210952.1;Name=WP_002210952.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105038.1;locus_tag=YPIP275_RS14640;product=phosphoethanolamine transferase EptA;protein_id=WP_002210952.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 22093 22332 . + . ID=gene-YPIP275_RS14645;Name=YPIP275_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14645;old_locus_tag=YPIP275_2676 NZ_AAOS02000015.1 Protein Homology CDS 22093 22332 . + 0 ID=cds-WP_002210953.1;Parent=gene-YPIP275_RS14645;Dbxref=GenBank:WP_002210953.1;Name=WP_002210953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169466.1;locus_tag=YPIP275_RS14645;product=DUF1289 domain-containing protein;protein_id=WP_002210953.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 22464 23360 . + . ID=gene-YPIP275_RS14650;Name=YPIP275_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14650;old_locus_tag=YPIP275_2677 NZ_AAOS02000015.1 Protein Homology CDS 22464 23360 . + 0 ID=cds-WP_002210954.1;Parent=gene-YPIP275_RS14650;Dbxref=GenBank:WP_002210954.1;Name=WP_002210954.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083060.1;locus_tag=YPIP275_RS14650;product=aldo/keto reductase;protein_id=WP_002210954.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 24158 24589 . + . ID=gene-YPIP275_RS14655;Name=rovA;gbkey=Gene;gene=rovA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14655;old_locus_tag=YPIP275_2678 NZ_AAOS02000015.1 Protein Homology CDS 24158 24589 . + 0 ID=cds-WP_002210955.1;Parent=gene-YPIP275_RS14655;Dbxref=GenBank:WP_002210955.1;Name=WP_002210955.1;Note=RovA (regulator of virulence A) is a MarR family transcriptional regulator.;gbkey=CDS;gene=rovA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210955.1;locus_tag=YPIP275_RS14655;product=virulence master transcriptional regulator RovA;protein_id=WP_002210955.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 24733 25200 . - . ID=gene-YPIP275_RS14660;Name=YPIP275_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14660;old_locus_tag=YPIP275_2679 NZ_AAOS02000015.1 Protein Homology CDS 24733 25200 . - 0 ID=cds-WP_002210956.1;Parent=gene-YPIP275_RS14660;Dbxref=GenBank:WP_002210956.1;Name=WP_002210956.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165921.1;locus_tag=YPIP275_RS14660;product=outer membrane lipoprotein;protein_id=WP_002210956.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 25756 26868 . + . ID=gene-YPIP275_RS14665;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=YPIP275_RS14665;old_locus_tag=YPIP275_2680 NZ_AAOS02000015.1 Protein Homology CDS 25756 26868 . + 0 ID=cds-WP_002218322.1;Parent=gene-YPIP275_RS14665;Dbxref=GenBank:WP_002218322.1;Name=WP_002218322.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218322.1;locus_tag=YPIP275_RS14665;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_002218322.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 26926 27240 . + . ID=gene-YPIP275_RS14670;Name=YPIP275_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14670;old_locus_tag=YPIP275_2681 NZ_AAOS02000015.1 Protein Homology CDS 26926 27240 . + 0 ID=cds-WP_002218323.1;Parent=gene-YPIP275_RS14670;Dbxref=GenBank:WP_002218323.1;Name=WP_002218323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218323.1;locus_tag=YPIP275_RS14670;product=MliC family protein;protein_id=WP_002218323.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 27331 27984 . + . ID=gene-YPIP275_RS14675;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=YPIP275_RS14675;old_locus_tag=YPIP275_2682 NZ_AAOS02000015.1 Protein Homology CDS 27331 27984 . + 0 ID=cds-WP_002210959.1;Parent=gene-YPIP275_RS14675;Dbxref=GenBank:WP_002210959.1;Name=WP_002210959.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105041.1;locus_tag=YPIP275_RS14675;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_002210959.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 28166 29440 . + . ID=gene-YPIP275_RS14680;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=YPIP275_RS14680;old_locus_tag=YPIP275_2683 NZ_AAOS02000015.1 Protein Homology CDS 28166 29440 . + 0 ID=cds-WP_002210960.1;Parent=gene-YPIP275_RS14680;Dbxref=GenBank:WP_002210960.1;Name=WP_002210960.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210960.1;locus_tag=YPIP275_RS14680;product=tyrosine--tRNA ligase;protein_id=WP_002210960.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 29595 30455 . + . ID=gene-YPIP275_RS14685;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=YPIP275_RS14685;old_locus_tag=YPIP275_2684 NZ_AAOS02000015.1 Protein Homology CDS 29595 30455 . + 0 ID=cds-WP_002210961.1;Parent=gene-YPIP275_RS14685;Dbxref=GenBank:WP_002210961.1;Name=WP_002210961.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210961.1;locus_tag=YPIP275_RS14685;product=pyridoxal kinase PdxY;protein_id=WP_002210961.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 30515 31120 . - . ID=gene-YPIP275_RS14690;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14690;old_locus_tag=YPIP275_2685 NZ_AAOS02000015.1 Protein Homology CDS 30515 31120 . - 0 ID=cds-WP_002210962.1;Parent=gene-YPIP275_RS14690;Dbxref=GenBank:WP_002210962.1;Name=WP_002210962.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210962.1;locus_tag=YPIP275_RS14690;product=glutathione transferase GstA;protein_id=WP_002210962.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 31370 32392 . + . ID=gene-YPIP275_RS14695;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14695;old_locus_tag=YPIP275_2687 NZ_AAOS02000015.1 Protein Homology CDS 31370 32392 . + 0 ID=cds-WP_000255944.1-18;Parent=gene-YPIP275_RS14695;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS14695;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 32389 33171 . + . ID=gene-YPIP275_RS14700;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS14700;old_locus_tag=YPIP275_2688 NZ_AAOS02000015.1 Protein Homology CDS 32389 33171 . + 0 ID=cds-WP_001317493.1-22;Parent=gene-YPIP275_RS14700;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS14700;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 33324 33587 . - . ID=gene-YPIP275_RS14705;Name=YPIP275_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14705;old_locus_tag=YPIP275_2689 NZ_AAOS02000015.1 Protein Homology CDS 33324 33587 . - 0 ID=cds-WP_002210964.1;Parent=gene-YPIP275_RS14705;Dbxref=GenBank:WP_002210964.1;Name=WP_002210964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874270.1;locus_tag=YPIP275_RS14705;product=YjbD family protein;protein_id=WP_002210964.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 33833 34423 . - . ID=gene-YPIP275_RS14710;Name=YPIP275_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14710;old_locus_tag=YPIP275_2690 NZ_AAOS02000015.1 Protein Homology CDS 33833 34423 . - 0 ID=cds-WP_002210965.1;Parent=gene-YPIP275_RS14710;Dbxref=GenBank:WP_002210965.1;Name=WP_002210965.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005184456.1;locus_tag=YPIP275_RS14710;product=Yip1 family protein;protein_id=WP_002210965.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 34678 36183 . - . ID=gene-YPIP275_RS14715;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14715;old_locus_tag=YPIP275_2691 NZ_AAOS02000015.1 Protein Homology CDS 34678 36183 . - 0 ID=cds-WP_002215910.1;Parent=gene-YPIP275_RS14715;Dbxref=GenBank:WP_002215910.1;Name=WP_002215910.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215910.1;locus_tag=YPIP275_RS14715;product=dipeptide/tripeptide permease DtpA;protein_id=WP_002215910.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 36826 38106 . - . ID=gene-YPIP275_RS14720;Name=YPIP275_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14720;old_locus_tag=YPIP275_2692 NZ_AAOS02000015.1 Protein Homology CDS 36826 38106 . - 0 ID=cds-WP_002210967.1;Parent=gene-YPIP275_RS14720;Dbxref=GenBank:WP_002210967.1;Name=WP_002210967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105042.1;locus_tag=YPIP275_RS14720;product=CMD domain-containing protein;protein_id=WP_002210967.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 38496 39311 . - . ID=gene-YPIP275_RS14725;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=YPIP275_RS14725;old_locus_tag=YPIP275_2694 NZ_AAOS02000015.1 Protein Homology CDS 38496 39311 . - 0 ID=cds-WP_002210969.1;Parent=gene-YPIP275_RS14725;Dbxref=GenBank:WP_002210969.1;Name=WP_002210969.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210969.1;locus_tag=YPIP275_RS14725;product=putrescine export ABC transporter ATP-binding protein SapF;protein_id=WP_002210969.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 39311 40303 . - . ID=gene-YPIP275_RS14730;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=YPIP275_RS14730;old_locus_tag=YPIP275_2695 NZ_AAOS02000015.1 Protein Homology CDS 39311 40303 . - 0 ID=cds-WP_002210970.1;Parent=gene-YPIP275_RS14730;Dbxref=GenBank:WP_002210970.1;Name=WP_002210970.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146812.1;locus_tag=YPIP275_RS14730;product=putrescine export ABC transporter ATP-binding protein SapD;protein_id=WP_002210970.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 40303 41193 . - . ID=gene-YPIP275_RS14735;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=YPIP275_RS14735;old_locus_tag=YPIP275_2696 NZ_AAOS02000015.1 Protein Homology CDS 40303 41193 . - 0 ID=cds-WP_002210971.1;Parent=gene-YPIP275_RS14735;Dbxref=GenBank:WP_002210971.1;Name=WP_002210971.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079344.1;locus_tag=YPIP275_RS14735;product=putrescine export ABC transporter permease SapC;protein_id=WP_002210971.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 41180 42145 . - . ID=gene-YPIP275_RS14740;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=YPIP275_RS14740;old_locus_tag=YPIP275_2697 NZ_AAOS02000015.1 Protein Homology CDS 41180 42145 . - 0 ID=cds-WP_002210972.1;Parent=gene-YPIP275_RS14740;Dbxref=GenBank:WP_002210972.1;Name=WP_002210972.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309897.1;locus_tag=YPIP275_RS14740;product=putrescine export ABC transporter permease SapB;protein_id=WP_002210972.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 42142 43788 . - . ID=gene-YPIP275_RS14745;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14745;old_locus_tag=YPIP275_2698 NZ_AAOS02000015.1 Protein Homology CDS 42142 43788 . - 0 ID=cds-WP_002210973.1;Parent=gene-YPIP275_RS14745;Dbxref=GenBank:WP_002210973.1;Name=WP_002210973.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229746.1;locus_tag=YPIP275_RS14745;product=ABC transporter substrate-binding protein SapA;protein_id=WP_002210973.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 44446 44904 . + . ID=gene-YPIP275_RS14760;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14760;old_locus_tag=YPIP275_2699 NZ_AAOS02000015.1 Protein Homology CDS 44446 44904 . + 0 ID=cds-WP_002213759.1-15;Parent=gene-YPIP275_RS14760;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS14760;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 45069 46097 . - . ID=gene-YPIP275_RS14765;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=YPIP275_RS14765;old_locus_tag=YPIP275_2700 NZ_AAOS02000015.1 Protein Homology CDS 45069 46097 . - 0 ID=cds-WP_002210974.1;Parent=gene-YPIP275_RS14765;Dbxref=GenBank:WP_002210974.1;Name=WP_002210974.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210974.1;locus_tag=YPIP275_RS14765;product=phage shock protein operon transcriptional activator;protein_id=WP_002210974.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 46342 47007 . + . ID=gene-YPIP275_RS14770;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14770;old_locus_tag=YPIP275_2701 NZ_AAOS02000015.1 Protein Homology CDS 46342 47007 . + 0 ID=cds-WP_002210975.1;Parent=gene-YPIP275_RS14770;Dbxref=GenBank:WP_002210975.1;Name=WP_002210975.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192521.1;locus_tag=YPIP275_RS14770;product=phage shock protein PspA;protein_id=WP_002210975.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 47169 47396 . + . ID=gene-YPIP275_RS14775;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=YPIP275_RS14775;old_locus_tag=YPIP275_2702 NZ_AAOS02000015.1 Protein Homology CDS 47169 47396 . + 0 ID=cds-WP_002210976.1;Parent=gene-YPIP275_RS14775;Dbxref=GenBank:WP_002210976.1;Name=WP_002210976.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005161022.1;locus_tag=YPIP275_RS14775;product=envelope stress response membrane protein PspB;protein_id=WP_002210976.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 47396 47755 . + . ID=gene-YPIP275_RS14780;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=YPIP275_RS14780;old_locus_tag=YPIP275_2703 NZ_AAOS02000015.1 Protein Homology CDS 47396 47755 . + 0 ID=cds-WP_002210977.1;Parent=gene-YPIP275_RS14780;Dbxref=GenBank:WP_002210977.1;Name=WP_002210977.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210977.1;locus_tag=YPIP275_RS14780;product=envelope stress response membrane protein PspC;protein_id=WP_002210977.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 47840 48082 . + . ID=gene-YPIP275_RS14785;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=YPIP275_RS14785;old_locus_tag=YPIP275_2704 NZ_AAOS02000015.1 Protein Homology CDS 47840 48082 . + 0 ID=cds-WP_002216375.1;Parent=gene-YPIP275_RS14785;Dbxref=GenBank:WP_002216375.1;Name=WP_002216375.1;Ontology_term=GO:0006950;gbkey=CDS;gene=pspD;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216375.1;locus_tag=YPIP275_RS14785;product=phage shock protein PspD;protein_id=WP_002216375.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 48063 49460 . + . ID=gene-YPIP275_RS14790;Name=YPIP275_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14790;old_locus_tag=YPIP275_2705 NZ_AAOS02000015.1 Protein Homology CDS 48063 49460 . + 0 ID=cds-WP_002210979.1;Parent=gene-YPIP275_RS14790;Dbxref=GenBank:WP_002210979.1;Name=WP_002210979.1;Ontology_term=GO:0003924,GO:0005525,GO:0019003;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,GDP binding|0019003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717556.1;locus_tag=YPIP275_RS14790;product=YcjX family GTP-binding protein;protein_id=WP_002210979.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 49457 50518 . + . ID=gene-YPIP275_RS14795;Name=YPIP275_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14795;old_locus_tag=YPIP275_2706 NZ_AAOS02000015.1 Protein Homology CDS 49457 50518 . + 0 ID=cds-WP_002210980.1;Parent=gene-YPIP275_RS14795;Dbxref=GenBank:WP_002210980.1;Name=WP_002210980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105044.1;locus_tag=YPIP275_RS14795;product=YcjF family protein;protein_id=WP_002210980.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 50528 50986 . - . ID=gene-YPIP275_RS14800;Name=YPIP275_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14800;old_locus_tag=YPIP275_2707 NZ_AAOS02000015.1 Protein Homology CDS 50528 50986 . - 0 ID=cds-WP_002210981.1;Parent=gene-YPIP275_RS14800;Dbxref=GenBank:WP_002210981.1;Name=WP_002210981.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192520.1;locus_tag=YPIP275_RS14800;product=RES family NAD+ phosphorylase;protein_id=WP_002210981.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 51048 51494 . - . ID=gene-YPIP275_RS14805;Name=YPIP275_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14805;old_locus_tag=YPIP275_2708 NZ_AAOS02000015.1 Protein Homology CDS 51048 51494 . - 0 ID=cds-WP_002210982.1;Parent=gene-YPIP275_RS14805;Dbxref=GenBank:WP_002210982.1;Name=WP_002210982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169556.1;locus_tag=YPIP275_RS14805;product=DUF2384 domain-containing protein;protein_id=WP_002210982.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 51829 53406 . + . ID=gene-YPIP275_RS14810;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=YPIP275_RS14810;old_locus_tag=YPIP275_2709 NZ_AAOS02000015.1 Protein Homology CDS 51829 53406 . + 0 ID=cds-WP_002210983.1;Parent=gene-YPIP275_RS14810;Dbxref=GenBank:WP_002210983.1;Name=WP_002210983.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210983.1;locus_tag=YPIP275_RS14810;product=transcriptional regulator TyrR;protein_id=WP_002210983.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 53553 54011 . - . ID=gene-YPIP275_RS14815;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14815;old_locus_tag=YPIP275_2710 NZ_AAOS02000015.1 Protein Homology CDS 53553 54011 . - 0 ID=cds-WP_002213759.1-16;Parent=gene-YPIP275_RS14815;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS14815;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 54264 54767 . - . ID=gene-YPIP275_RS14820;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=YPIP275_RS14820;old_locus_tag=YPIP275_2711 NZ_AAOS02000015.1 Protein Homology CDS 54264 54767 . - 0 ID=cds-WP_002210984.1;Parent=gene-YPIP275_RS14820;Dbxref=GenBank:WP_002210984.1;Name=WP_002210984.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083075.1;locus_tag=YPIP275_RS14820;product=thiol peroxidase;protein_id=WP_002210984.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 54930 55904 . + . ID=gene-YPIP275_RS14825;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=YPIP275_RS14825;old_locus_tag=YPIP275_2712 NZ_AAOS02000015.1 Protein Homology CDS 54930 55904 . + 0 ID=cds-WP_002210985.1;Parent=gene-YPIP275_RS14825;Dbxref=GenBank:WP_002210985.1;Name=WP_002210985.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683616.1;locus_tag=YPIP275_RS14825;product=L-Ala-D/L-Glu epimerase;protein_id=WP_002210985.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 55946 56653 . - . ID=gene-YPIP275_RS14830;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14830;old_locus_tag=YPIP275_2713 NZ_AAOS02000015.1 Protein Homology CDS 55946 56653 . - 0 ID=cds-WP_002220315.1;Parent=gene-YPIP275_RS14830;Dbxref=GenBank:WP_002220315.1;Name=WP_002220315.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220315.1;locus_tag=YPIP275_RS14830;product=murein tripeptide amidase MpaA;protein_id=WP_002220315.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 57094 58710 . + . ID=gene-YPIP275_RS14835;Name=YPIP275_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14835;old_locus_tag=YPIP275_2714 NZ_AAOS02000015.1 Protein Homology CDS 57094 58710 . + 0 ID=cds-WP_002210987.1;Parent=gene-YPIP275_RS14835;Dbxref=GenBank:WP_002210987.1;Name=WP_002210987.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702130.1;locus_tag=YPIP275_RS14835;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002210987.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 58953 59936 . + . ID=gene-YPIP275_RS14840;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=YPIP275_RS14840;old_locus_tag=YPIP275_2715 NZ_AAOS02000015.1 Protein Homology CDS 58953 59936 . + 0 ID=cds-WP_002227906.1;Parent=gene-YPIP275_RS14840;Dbxref=GenBank:WP_002227906.1;Name=WP_002227906.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702124.1;locus_tag=YPIP275_RS14840;product=zinc transporter ZntB;protein_id=WP_002227906.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 60310 61149 . - . ID=gene-YPIP275_RS14845;Name=YPIP275_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14845;old_locus_tag=YPIP275_2717 NZ_AAOS02000015.1 Protein Homology CDS 60310 61149 . - 0 ID=cds-WP_002210990.1;Parent=gene-YPIP275_RS14845;Dbxref=GenBank:WP_002210990.1;Name=WP_002210990.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304035.1;locus_tag=YPIP275_RS14845;product=MerR family transcriptional regulator;protein_id=WP_002210990.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 61461 62429 . - . ID=gene-YPIP275_RS14850;Name=YPIP275_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14850;old_locus_tag=YPIP275_2718 NZ_AAOS02000015.1 Protein Homology CDS 61461 62429 . - 0 ID=cds-WP_002222427.1;Parent=gene-YPIP275_RS14850;Dbxref=GenBank:WP_002222427.1;Name=WP_002222427.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222427.1;locus_tag=YPIP275_RS14850;product=alpha/beta hydrolase;protein_id=WP_002222427.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 62736 63677 . - . ID=gene-YPIP275_RS14855;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14855;old_locus_tag=YPIP275_2719 NZ_AAOS02000015.1 Protein Homology CDS 62736 63677 . - 0 ID=cds-WP_002210992.1;Parent=gene-YPIP275_RS14855;Dbxref=GenBank:WP_002210992.1;Name=WP_002210992.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011093557.1;locus_tag=YPIP275_RS14855;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_002210992.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 63952 67485 . - . ID=gene-YPIP275_RS14860;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS14860;old_locus_tag=YPIP275_2720 NZ_AAOS02000015.1 Protein Homology CDS 63952 67485 . - 0 ID=cds-WP_002210993.1;Parent=gene-YPIP275_RS14860;Dbxref=GenBank:WP_002210993.1;Name=WP_002210993.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002423411.1;locus_tag=YPIP275_RS14860;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_002210993.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 67964 68296 . + . ID=gene-YPIP275_RS14865;Name=YPIP275_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14865;old_locus_tag=YPIP275_2721 NZ_AAOS02000015.1 Protein Homology CDS 67964 68296 . + 0 ID=cds-WP_002210994.1;Parent=gene-YPIP275_RS14865;Dbxref=GenBank:WP_002210994.1;Name=WP_002210994.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015059047.1;locus_tag=YPIP275_RS14865;product=DMT family transporter;protein_id=WP_002210994.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 68356 69015 . - . ID=gene-YPIP275_RS14870;Name=YPIP275_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14870;old_locus_tag=YPIP275_2722 NZ_AAOS02000015.1 Protein Homology CDS 68356 69015 . - 0 ID=cds-WP_002210995.1;Parent=gene-YPIP275_RS14870;Dbxref=GenBank:WP_002210995.1;Name=WP_002210995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702111.1;locus_tag=YPIP275_RS14870;product=MgtC/SapB family protein;protein_id=WP_002210995.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 69300 69641 . + . ID=gene-YPIP275_RS14875;Name=YPIP275_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14875;old_locus_tag=YPIP275_2723 NZ_AAOS02000015.1 Protein Homology CDS 69300 69641 . + 0 ID=cds-WP_002227907.1;Parent=gene-YPIP275_RS14875;Dbxref=GenBank:WP_002227907.1;Name=WP_002227907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413750.1;locus_tag=YPIP275_RS14875;product=putative hemolysin;protein_id=WP_002227907.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 69699 70151 . - . ID=gene-YPIP275_RS14880;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS14880;old_locus_tag=YPIP275_2724 NZ_AAOS02000015.1 Protein Homology CDS 69699 70151 . - 0 ID=cds-WP_002214605.1;Parent=gene-YPIP275_RS14880;Dbxref=GenBank:WP_002214605.1;Name=WP_002214605.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105050.1;locus_tag=YPIP275_RS14880;product=heat shock protein HslJ;protein_id=WP_002214605.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 70221 71213 . - . ID=gene-YPIP275_RS14885;Name=YPIP275_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14885;old_locus_tag=YPIP275_2725 NZ_AAOS02000015.1 Protein Homology CDS 70221 71213 . - 0 ID=cds-WP_002210998.1;Parent=gene-YPIP275_RS14885;Dbxref=GenBank:WP_002210998.1;Name=WP_002210998.1;Ontology_term=GO:0008720,GO:0070404;gbkey=CDS;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,NADH binding|0070404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210998.1;locus_tag=YPIP275_RS14885;product=2-hydroxyacid dehydrogenase;protein_id=WP_002210998.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 71479 74175 . + . ID=gene-YPIP275_RS14890;Name=YPIP275_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14890;old_locus_tag=YPIP275_2726 NZ_AAOS02000015.1 Protein Homology CDS 71479 74175 . + 0 ID=cds-WP_002210999.1;Parent=gene-YPIP275_RS14890;Dbxref=GenBank:WP_002210999.1;Name=WP_002210999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210999.1;locus_tag=YPIP275_RS14890;product=YdbH family protein;protein_id=WP_002210999.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 74172 74366 . + . ID=gene-YPIP275_RS14895;Name=YPIP275_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14895;old_locus_tag=YPIP275_2727 NZ_AAOS02000015.1 Protein Homology CDS 74172 74366 . + 0 ID=cds-WP_002211000.1;Parent=gene-YPIP275_RS14895;Dbxref=GenBank:WP_002211000.1;Name=WP_002211000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169621.1;locus_tag=YPIP275_RS14895;product=YnbE family lipoprotein;protein_id=WP_002211000.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 74376 74747 . + . ID=gene-YPIP275_RS14900;Name=YPIP275_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14900;old_locus_tag=YPIP275_2728 NZ_AAOS02000015.1 Protein Homology CDS 74376 74747 . + 0 ID=cds-WP_002211001.1;Parent=gene-YPIP275_RS14900;Dbxref=GenBank:WP_002211001.1;Name=WP_002211001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304040.1;locus_tag=YPIP275_RS14900;product=YdbL family probable chaperone protein;protein_id=WP_002211001.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 74948 76339 . - . ID=gene-YPIP275_RS14905;Name=dalD;gbkey=Gene;gene=dalD;gene_biotype=protein_coding;locus_tag=YPIP275_RS14905;old_locus_tag=YPIP275_2729 NZ_AAOS02000015.1 Protein Homology CDS 74948 76339 . - 0 ID=cds-WP_002211002.1;Parent=gene-YPIP275_RS14905;Dbxref=GenBank:WP_002211002.1;Name=WP_002211002.1;Ontology_term=GO:0019527,GO:0047813;gbkey=CDS;gene=dalD;go_function=D-arabinitol 4-dehydrogenase activity|0047813||IEA;go_process=pentitol catabolic process|0019527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304041.1;locus_tag=YPIP275_RS14905;product=D-arabinitol 4-dehydrogenase;protein_id=WP_002211002.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 76549 77505 . + . ID=gene-YPIP275_RS14910;Name=YPIP275_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14910;old_locus_tag=YPIP275_2730 NZ_AAOS02000015.1 Protein Homology CDS 76549 77505 . + 0 ID=cds-WP_002211003.1;Parent=gene-YPIP275_RS14910;Dbxref=GenBank:WP_002211003.1;Name=WP_002211003.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211003.1;locus_tag=YPIP275_RS14910;product=sugar-binding transcriptional regulator;protein_id=WP_002211003.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 77626 78231 . - . ID=gene-YPIP275_RS14915;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=YPIP275_RS14915;old_locus_tag=YPIP275_2731 NZ_AAOS02000015.1 Protein Homology CDS 77626 78231 . - 0 ID=cds-WP_002211004.1;Parent=gene-YPIP275_RS14915;Dbxref=GenBank:WP_002211004.1;Name=WP_002211004.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226683.1;locus_tag=YPIP275_RS14915;product=FMN-dependent NADH-azoreductase;protein_id=WP_002211004.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 78654 82541 . + . ID=gene-YPIP275_RS14920;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14920;old_locus_tag=YPIP275_2732 NZ_AAOS02000015.1 Protein Homology CDS 78654 82541 . + 0 ID=cds-WP_002211005.1;Parent=gene-YPIP275_RS14920;Dbxref=GenBank:WP_002211005.1;Name=WP_002211005.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874315.1;locus_tag=YPIP275_RS14920;product=ATP-dependent RNA helicase HrpA;protein_id=WP_002211005.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 82880 83209 . + . ID=gene-YPIP275_RS14925;Name=YPIP275_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14925 NZ_AAOS02000015.1 Protein Homology CDS 82880 83209 . + 0 ID=cds-WP_002214609.1;Parent=gene-YPIP275_RS14925;Dbxref=GenBank:WP_002214609.1;Name=WP_002214609.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683954.1;locus_tag=YPIP275_RS14925;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_002214609.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 83206 83529 . + . ID=gene-YPIP275_RS14930;Name=YPIP275_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14930;old_locus_tag=YPIP275_2734 NZ_AAOS02000015.1 Protein Homology CDS 83206 83529 . + 0 ID=cds-WP_002211007.1;Parent=gene-YPIP275_RS14930;Dbxref=GenBank:WP_002211007.1;Name=WP_002211007.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683613.1;locus_tag=YPIP275_RS14930;product=helix-turn-helix domain-containing protein;protein_id=WP_002211007.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 83585 84421 . - . ID=gene-YPIP275_RS14935;Name=YPIP275_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14935;old_locus_tag=YPIP275_2735 NZ_AAOS02000015.1 Protein Homology CDS 83585 84421 . - 0 ID=cds-WP_002211008.1;Parent=gene-YPIP275_RS14935;Dbxref=GenBank:WP_002211008.1;Name=WP_002211008.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211008.1;locus_tag=YPIP275_RS14935;product=trypsin-like serine peptidase;protein_id=WP_002211008.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 84567 84647 . - . ID=gene-YPIP275_RS29370;Name=ydgU;gbkey=Gene;gene=ydgU;gene_biotype=protein_coding;locus_tag=YPIP275_RS29370 NZ_AAOS02000015.1 Protein Homology CDS 84567 84647 . - 0 ID=cds-WP_002214611.1;Parent=gene-YPIP275_RS29370;Dbxref=GenBank:WP_002214611.1;Name=WP_002214611.1;gbkey=CDS;gene=ydgU;inference=COORDINATES: protein motif:HMM:NF052476.1;locus_tag=YPIP275_RS29370;product=small membrane protein YdgU;protein_id=WP_002214611.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 84755 85039 . - . ID=gene-YPIP275_RS14940;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=YPIP275_RS14940;old_locus_tag=YPIP275_2736 NZ_AAOS02000015.1 Protein Homology CDS 84755 85039 . - 0 ID=cds-WP_002211009.1;Parent=gene-YPIP275_RS14940;Dbxref=GenBank:WP_002211009.1;Name=WP_002211009.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211009.1;locus_tag=YPIP275_RS14940;product=acid resistance repetitive basic protein Asr;protein_id=WP_002211009.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 85643 86197 . + . ID=gene-YPIP275_RS14950;Name=YPIP275_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14950;old_locus_tag=YPIP275_2737 NZ_AAOS02000015.1 Protein Homology CDS 85643 86197 . + 0 ID=cds-WP_002211010.1;Parent=gene-YPIP275_RS14950;Dbxref=GenBank:WP_002211010.1;Name=WP_002211010.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229608.1;locus_tag=YPIP275_RS14950;product=cytochrome b;protein_id=WP_002211010.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 86223 86801 . + . ID=gene-YPIP275_RS14955;Name=YPIP275_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14955;old_locus_tag=YPIP275_2738 NZ_AAOS02000015.1 Protein Homology CDS 86223 86801 . + 0 ID=cds-WP_002211011.1;Parent=gene-YPIP275_RS14955;Dbxref=GenBank:WP_002211011.1;Name=WP_002211011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211011.1;locus_tag=YPIP275_RS14955;product=YceI family protein;protein_id=WP_002211011.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 87366 87524 . + . ID=gene-YPIP275_RS14960;Name=YPIP275_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14960;old_locus_tag=YPIP275_2740 NZ_AAOS02000015.1 Protein Homology CDS 87366 87524 . + 0 ID=cds-WP_002214618.1;Parent=gene-YPIP275_RS14960;Dbxref=GenBank:WP_002214618.1;Name=WP_002214618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214618.1;locus_tag=YPIP275_RS14960;product=invertase;protein_id=WP_002214618.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 87628 87984 . - . ID=gene-YPIP275_RS28790;Name=YPIP275_RS28790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28790;old_locus_tag=YPIP275_2741 NZ_AAOS02000015.1 Protein Homology CDS 87628 87984 . - 0 ID=cds-WP_002227910.1;Parent=gene-YPIP275_RS28790;Dbxref=GenBank:WP_002227910.1;Name=WP_002227910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229420.1;locus_tag=YPIP275_RS28790;product=hypothetical protein;protein_id=WP_002227910.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 87987 90611 . - . ID=gene-YPIP275_RS14970;Name=YPIP275_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14970;old_locus_tag=YPIP275_2742 NZ_AAOS02000015.1 Protein Homology CDS 87987 90611 . - 0 ID=cds-WP_002211013.1;Parent=gene-YPIP275_RS14970;Dbxref=GenBank:WP_002211013.1;Name=WP_002211013.1;Ontology_term=GO:0008294,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_function=calcium- and calmodulin-responsive adenylate cyclase activity|0008294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230911.1;locus_tag=YPIP275_RS14970;product=anthrax toxin-like adenylyl cyclase domain-containing protein;protein_id=WP_002211013.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 91581 92039 . + . ID=gene-YPIP275_RS14980;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14980;old_locus_tag=YPIP275_2743 NZ_AAOS02000015.1 Protein Homology CDS 91581 92039 . + 0 ID=cds-WP_002213759.1-17;Parent=gene-YPIP275_RS14980;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS14980;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 92161 93660 . - . ID=gene-YPIP275_RS14985;Name=YPIP275_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14985;old_locus_tag=YPIP275_2744 NZ_AAOS02000015.1 Protein Homology CDS 92161 93660 . - 0 ID=cds-WP_002211014.1;Parent=gene-YPIP275_RS14985;Dbxref=GenBank:WP_002211014.1;Name=WP_002211014.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304044.1;locus_tag=YPIP275_RS14985;product=carboxypeptidase M32;protein_id=WP_002211014.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 93754 95010 . - . ID=gene-YPIP275_RS14990;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=YPIP275_RS14990;old_locus_tag=YPIP275_2745 NZ_AAOS02000015.1 Protein Homology CDS 93754 95010 . - 0 ID=cds-WP_002354278.1;Parent=gene-YPIP275_RS14990;Dbxref=GenBank:WP_002354278.1;Name=WP_002354278.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004712885.1;locus_tag=YPIP275_RS14990;product=two-component system sensor histidine kinase RstB;protein_id=WP_002354278.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 95059 95805 . - . ID=gene-YPIP275_RS14995;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14995;old_locus_tag=YPIP275_2746 NZ_AAOS02000015.1 Protein Homology CDS 95059 95805 . - 0 ID=cds-WP_002211015.1;Parent=gene-YPIP275_RS14995;Dbxref=GenBank:WP_002211015.1;Name=WP_002211015.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211015.1;locus_tag=YPIP275_RS14995;product=two-component system response regulator RstA;protein_id=WP_002211015.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 96102 96518 . + . ID=gene-YPIP275_RS15000;Name=YPIP275_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15000;old_locus_tag=YPIP275_2747 NZ_AAOS02000015.1 Protein Homology CDS 96102 96518 . + 0 ID=cds-WP_002211016.1;Parent=gene-YPIP275_RS15000;Dbxref=GenBank:WP_002211016.1;Name=WP_002211016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211016.1;locus_tag=YPIP275_RS15000;product=hypothetical protein;protein_id=WP_002211016.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 96542 97933 . - . ID=gene-YPIP275_RS15005;Name=YPIP275_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15005;old_locus_tag=YPIP275_2748 NZ_AAOS02000015.1 Protein Homology CDS 96542 97933 . - 0 ID=cds-WP_002211017.1;Parent=gene-YPIP275_RS15005;Dbxref=GenBank:WP_002211017.1;Name=WP_002211017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211017.1;locus_tag=YPIP275_RS15005;product=amino acid permease;protein_id=WP_002211017.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 98203 99156 . - . ID=gene-YPIP275_RS15010;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=YPIP275_RS15010;old_locus_tag=YPIP275_2749 NZ_AAOS02000015.1 Protein Homology CDS 98203 99156 . - 0 ID=cds-WP_002211018.1;Parent=gene-YPIP275_RS15010;Dbxref=GenBank:WP_002211018.1;Name=WP_002211018.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304045.1;locus_tag=YPIP275_RS15010;product=DUF1471 family protein YdgH;protein_id=WP_002211018.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 99362 99565 . + . ID=gene-YPIP275_RS15015;Name=YPIP275_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15015 NZ_AAOS02000015.1 Protein Homology CDS 99362 99565 . + 0 ID=cds-WP_002227912.1;Parent=gene-YPIP275_RS15015;Dbxref=GenBank:WP_002227912.1;Name=WP_002227912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227912.1;locus_tag=YPIP275_RS15015;product=hypothetical protein;protein_id=WP_002227912.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 99686 101212 . + . ID=gene-YPIP275_RS15020;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=YPIP275_RS15020;old_locus_tag=YPIP275_2750 NZ_AAOS02000015.1 Protein Homology CDS 99686 101212 . + 0 ID=cds-WP_002211019.1;Parent=gene-YPIP275_RS15020;Dbxref=GenBank:WP_002211019.1;Name=WP_002211019.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150210.1;locus_tag=YPIP275_RS15020;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_002211019.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 101285 102679 . + . ID=gene-YPIP275_RS15025;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=YPIP275_RS15025;old_locus_tag=YPIP275_2751 NZ_AAOS02000015.1 Protein Homology CDS 101285 102679 . + 0 ID=cds-WP_002211020.1;Parent=gene-YPIP275_RS15025;Dbxref=GenBank:WP_002211020.1;Name=WP_002211020.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211020.1;locus_tag=YPIP275_RS15025;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_002211020.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 102954 103910 . - . ID=gene-YPIP275_RS15030;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=YPIP275_RS15030;old_locus_tag=YPIP275_2752 NZ_AAOS02000015.1 Protein Homology CDS 102954 103910 . - 0 ID=cds-WP_002211021.1;Parent=gene-YPIP275_RS15030;Dbxref=GenBank:WP_002211021.1;Name=WP_002211021.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228471.1;locus_tag=YPIP275_RS15030;product=universal stress protein UspE;protein_id=WP_002211021.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 104045 104797 . - . ID=gene-YPIP275_RS15035;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=YPIP275_RS15035;old_locus_tag=YPIP275_2753 NZ_AAOS02000015.1 Protein Homology CDS 104045 104797 . - 0 ID=cds-WP_002211022.1;Parent=gene-YPIP275_RS15035;Dbxref=GenBank:WP_002211022.1;Name=WP_002211022.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192502.1;locus_tag=YPIP275_RS15035;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_002211022.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 104870 105388 . - . ID=gene-YPIP275_RS15040;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=YPIP275_RS15040;old_locus_tag=YPIP275_2754 NZ_AAOS02000015.1 Protein Homology CDS 104870 105388 . - 0 ID=cds-WP_002211023.1;Parent=gene-YPIP275_RS15040;Dbxref=GenBank:WP_002211023.1;Name=WP_002211023.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211023.1;locus_tag=YPIP275_RS15040;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_002211023.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 105629 107074 . + . ID=gene-YPIP275_RS15045;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=YPIP275_RS15045;old_locus_tag=YPIP275_2755 NZ_AAOS02000015.1 Protein Homology CDS 105629 107074 . + 0 ID=cds-WP_002211024.1;Parent=gene-YPIP275_RS15045;Dbxref=GenBank:WP_002211024.1;Name=WP_002211024.1;Ontology_term=GO:0016791;gbkey=CDS;gene=phoA;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211024.1;locus_tag=YPIP275_RS15045;product=alkaline phosphatase;protein_id=WP_002211024.1;transl_table=11 NZ_AAOS02000015.1 RefSeq pseudogene 107620 110015 . + . ID=gene-YPIP275_RS29240;Name=YPIP275_RS29240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29240;old_locus_tag=YPIP275_2756;pseudo=true NZ_AAOS02000015.1 Protein Homology CDS 107620 110015 . + 0 ID=cds-YPIP275_RS29240;Parent=gene-YPIP275_RS29240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683612.1;locus_tag=YPIP275_RS29240;product=tellurite resistance TerB family protein;pseudo=true;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 110146 110820 . + . ID=gene-YPIP275_RS15060;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=YPIP275_RS15060;old_locus_tag=YPIP275_2757 NZ_AAOS02000015.1 Protein Homology CDS 110146 110820 . + 0 ID=cds-WP_002211025.1;Parent=gene-YPIP275_RS15060;Dbxref=GenBank:WP_002211025.1;Name=WP_002211025.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002359373.1;locus_tag=YPIP275_RS15060;product=pyrimidine 5'-nucleotidase;protein_id=WP_002211025.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 110887 111189 . - . ID=gene-YPIP275_RS15065;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=YPIP275_RS15065;old_locus_tag=YPIP275_2758 NZ_AAOS02000015.1 Protein Homology CDS 110887 111189 . - 0 ID=cds-WP_002211026.1;Parent=gene-YPIP275_RS15065;Dbxref=GenBank:WP_002211026.1;Name=WP_002211026.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211026.1;locus_tag=YPIP275_RS15065;product=acetolactate synthase small subunit;protein_id=WP_002211026.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 111191 112858 . - . ID=gene-YPIP275_RS15070;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=YPIP275_RS15070;old_locus_tag=YPIP275_2759 NZ_AAOS02000015.1 Protein Homology CDS 111191 112858 . - 0 ID=cds-WP_002211027.1;Parent=gene-YPIP275_RS15070;Dbxref=GenBank:WP_002211027.1;Name=WP_002211027.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079406.1;locus_tag=YPIP275_RS15070;product=acetolactate synthase large subunit;protein_id=WP_002211027.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 112968 113063 . - . ID=gene-YPIP275_RS27515;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=YPIP275_RS27515 NZ_AAOS02000015.1 Protein Homology CDS 112968 113063 . - 0 ID=cds-WP_002232808.1;Parent=gene-YPIP275_RS27515;Dbxref=GenBank:WP_002232808.1;Name=WP_002232808.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: protein motif:HMM:NF019661.6;locus_tag=YPIP275_RS27515;product=ilvB operon leader peptide IvbL;protein_id=WP_002232808.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 113446 114240 . + . ID=gene-YPIP275_RS15075;Name=YPIP275_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15075;old_locus_tag=YPIP275_2760 NZ_AAOS02000015.1 Protein Homology CDS 113446 114240 . + 0 ID=cds-WP_002211028.1;Parent=gene-YPIP275_RS15075;Dbxref=GenBank:WP_002211028.1;Name=WP_002211028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413742.1;locus_tag=YPIP275_RS15075;product=DUF1460 domain-containing protein;protein_id=WP_002211028.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 114409 116949 . - . ID=gene-YPIP275_RS15080;Name=YPIP275_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15080;old_locus_tag=YPIP275_2761 NZ_AAOS02000015.1 Protein Homology CDS 114409 116949 . - 0 ID=cds-WP_002211029.1;Parent=gene-YPIP275_RS15080;Dbxref=GenBank:WP_002211029.1;Name=WP_002211029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016598681.1;locus_tag=YPIP275_RS15080;product=putative virulence factor;protein_id=WP_002211029.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 116946 120017 . - . ID=gene-YPIP275_RS15085;Name=YPIP275_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15085;old_locus_tag=YPIP275_2762 NZ_AAOS02000015.1 Protein Homology CDS 116946 120017 . - 0 ID=cds-WP_002211030.1;Parent=gene-YPIP275_RS15085;Dbxref=GenBank:WP_002211030.1;Name=WP_002211030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002421865.1;locus_tag=YPIP275_RS15085;product=virulence factor SrfB;protein_id=WP_002211030.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 120022 121455 . - . ID=gene-YPIP275_RS15090;Name=YPIP275_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15090;old_locus_tag=YPIP275_2763 NZ_AAOS02000015.1 Protein Homology CDS 120022 121455 . - 0 ID=cds-WP_002211031.1;Parent=gene-YPIP275_RS15090;Dbxref=GenBank:WP_002211031.1;Name=WP_002211031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211031.1;locus_tag=YPIP275_RS15090;product=SrfA family protein;protein_id=WP_002211031.1;transl_table=11 NZ_AAOS02000015.1 RefSeq pseudogene 121661 123124 . + . ID=gene-YPIP275_RS15095;Name=YPIP275_RS15095;end_range=123124,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS15095;old_locus_tag=YPIP275_2765;partial=true;pseudo=true NZ_AAOS02000015.1 Protein Homology CDS 121661 123124 . + 0 ID=cds-YPIP275_RS15095;Parent=gene-YPIP275_RS15095;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009116,GO:0044209,GO:0008714;end_range=123124,.;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223601.1;locus_tag=YPIP275_RS15095;partial=true;product=AMP nucleosidase;pseudo=true;transl_table=11 NZ_AAOS02000015.1 RefSeq pseudogene 123082 123582 . - . ID=gene-YPIP275_RS28795;Name=YPIP275_RS28795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28795;partial=true;pseudo=true;start_range=.,123082 NZ_AAOS02000015.1 Protein Homology CDS 123082 123582 . - 0 ID=cds-YPIP275_RS28795;Parent=gene-YPIP275_RS28795;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304053.1;locus_tag=YPIP275_RS28795;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;start_range=.,123082;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 123592 124413 . - . ID=gene-YPIP275_RS15100;Name=YPIP275_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15100;old_locus_tag=YPIP275_2766 NZ_AAOS02000015.1 Protein Homology CDS 123592 124413 . - 0 ID=cds-WP_002211034.1;Parent=gene-YPIP275_RS15100;Dbxref=GenBank:WP_002211034.1;Name=WP_002211034.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211034.1;locus_tag=YPIP275_RS15100;product=ABC transporter permease;protein_id=WP_002211034.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 124417 125448 . - . ID=gene-YPIP275_RS15105;Name=YPIP275_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15105;old_locus_tag=YPIP275_2767 NZ_AAOS02000015.1 Protein Homology CDS 124417 125448 . - 0 ID=cds-WP_002211035.1;Parent=gene-YPIP275_RS15105;Dbxref=GenBank:WP_002211035.1;Name=WP_002211035.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192494.1;locus_tag=YPIP275_RS15105;product=ABC transporter substrate-binding protein;protein_id=WP_002211035.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 125668 126237 . + . ID=gene-YPIP275_RS27520;Name=YPIP275_RS27520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27520 NZ_AAOS02000015.1 Protein Homology CDS 125668 126237 . + 0 ID=cds-WP_223871902.1;Parent=gene-YPIP275_RS27520;Dbxref=GenBank:WP_223871902.1;Name=WP_223871902.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024799.7;locus_tag=YPIP275_RS27520;product=substrate-binding domain-containing protein;protein_id=WP_223871902.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 126381 126851 . + . ID=gene-YPIP275_RS15115;Name=YPIP275_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15115;old_locus_tag=YPIP275_2769 NZ_AAOS02000015.1 Protein Homology CDS 126381 126851 . + 0 ID=cds-WP_002211037.1;Parent=gene-YPIP275_RS15115;Dbxref=GenBank:WP_002211037.1;Name=WP_002211037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211037.1;locus_tag=YPIP275_RS15115;product=hypothetical protein;protein_id=WP_002211037.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 126915 127931 . + . ID=gene-YPIP275_RS15120;Name=YPIP275_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15120;old_locus_tag=YPIP275_2770 NZ_AAOS02000015.1 Protein Homology CDS 126915 127931 . + 0 ID=cds-WP_002211038.1;Parent=gene-YPIP275_RS15120;Dbxref=GenBank:WP_002211038.1;Name=WP_002211038.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211038.1;locus_tag=YPIP275_RS15120;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002211038.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 128491 128688 . - . ID=gene-YPIP275_RS15130;Name=YPIP275_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15130;old_locus_tag=YPIP275_2772 NZ_AAOS02000015.1 Protein Homology CDS 128491 128688 . - 0 ID=cds-WP_002211040.1-3;Parent=gene-YPIP275_RS15130;Dbxref=GenBank:WP_002211040.1;Name=WP_002211040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211040.1;locus_tag=YPIP275_RS15130;product=hypothetical protein;protein_id=WP_002211040.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 128885 129133 . - . ID=gene-YPIP275_RS27525;Name=YPIP275_RS27525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27525;old_locus_tag=YPIP275_2774 NZ_AAOS02000015.1 Protein Homology CDS 128885 129133 . - 0 ID=cds-WP_001399975.1-2;Parent=gene-YPIP275_RS27525;Dbxref=GenBank:WP_001399975.1;Name=WP_001399975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001419846.1;locus_tag=YPIP275_RS27525;product=hypothetical protein;protein_id=WP_001399975.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 129222 130466 . - . ID=gene-YPIP275_RS15140;Name=YPIP275_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15140;old_locus_tag=YPIP275_2775 NZ_AAOS02000015.1 Protein Homology CDS 129222 130466 . - 0 ID=cds-WP_000722136.1-2;Parent=gene-YPIP275_RS15140;Dbxref=GenBank:WP_000722136.1;Name=WP_000722136.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001388363.1;locus_tag=YPIP275_RS15140;product=type II secretion system protein GspD;protein_id=WP_000722136.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 130466 131491 . - . ID=gene-YPIP275_RS15145;Name=YPIP275_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15145;old_locus_tag=YPIP275_2776 NZ_AAOS02000015.1 Protein Homology CDS 130466 131491 . - 0 ID=cds-WP_002210570.1-2;Parent=gene-YPIP275_RS15145;Dbxref=GenBank:WP_002210570.1;Name=WP_002210570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001430025.1;locus_tag=YPIP275_RS15145;product=zonular occludens toxin family protein;protein_id=WP_002210570.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 131495 131782 . - . ID=gene-YPIP275_RS15150;Name=YPIP275_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15150;old_locus_tag=YPIP275_2777 NZ_AAOS02000015.1 Protein Homology CDS 131495 131782 . - 0 ID=cds-WP_000467041.1-2;Parent=gene-YPIP275_RS15150;Dbxref=GenBank:WP_000467041.1;Name=WP_000467041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000467082.1;locus_tag=YPIP275_RS15150;product=DUF2523 domain-containing protein;protein_id=WP_000467041.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 131795 133357 . - . ID=gene-YPIP275_RS15155;Name=YPIP275_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15155;old_locus_tag=YPIP275_2778 NZ_AAOS02000015.1 Protein Homology CDS 131795 133357 . - 0 ID=cds-WP_002222443.1-2;Parent=gene-YPIP275_RS15155;Dbxref=GenBank:WP_002222443.1;Name=WP_002222443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222443.1;locus_tag=YPIP275_RS15155;product=hypothetical protein;protein_id=WP_002222443.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 133572 133805 . - . ID=gene-YPIP275_RS15160;Name=YPIP275_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15160;old_locus_tag=YPIP275_2779 NZ_AAOS02000015.1 Protein Homology CDS 133572 133805 . - 0 ID=cds-WP_000473544.1-2;Parent=gene-YPIP275_RS15160;Dbxref=GenBank:WP_000473544.1;Name=WP_000473544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534187.1;locus_tag=YPIP275_RS15160;product=hypothetical protein;protein_id=WP_000473544.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 133841 134092 . - . ID=gene-YPIP275_RS15165;Name=YPIP275_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15165;old_locus_tag=YPIP275_2780 NZ_AAOS02000015.1 Protein Homology CDS 133841 134092 . - 0 ID=cds-WP_000381239.1-2;Parent=gene-YPIP275_RS15165;Dbxref=GenBank:WP_000381239.1;Name=WP_000381239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536107.1;locus_tag=YPIP275_RS15165;product=membrane protein;protein_id=WP_000381239.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 134095 134412 . - . ID=gene-YPIP275_RS15170;Name=YPIP275_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15170;old_locus_tag=YPIP275_2781 NZ_AAOS02000015.1 Protein Homology CDS 134095 134412 . - 0 ID=cds-WP_000073835.1-2;Parent=gene-YPIP275_RS15170;Dbxref=GenBank:WP_000073835.1;Name=WP_000073835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000073833.1;locus_tag=YPIP275_RS15170;product=DNA-binding protein;protein_id=WP_000073835.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 134424 135476 . - . ID=gene-YPIP275_RS15175;Name=YPIP275_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15175;old_locus_tag=YPIP275_2782 NZ_AAOS02000015.1 Protein Homology CDS 134424 135476 . - 0 ID=cds-WP_000568107.1-2;Parent=gene-YPIP275_RS15175;Dbxref=GenBank:WP_000568107.1;Name=WP_000568107.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568107.1;locus_tag=YPIP275_RS15175;product=phage/plasmid replication protein%2C II/X family;protein_id=WP_000568107.1;transl_table=11 NZ_AAOS02000015.1 RefSeq gene 135648 136000 . + . ID=gene-YPIP275_RS15180;Name=YPIP275_RS15180;end_range=136000,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS15180;old_locus_tag=YPIP275_2783;partial=true NZ_AAOS02000015.1 Protein Homology CDS 135648 136000 . + 0 ID=cds-WP_002211041.1-2;Parent=gene-YPIP275_RS15180;Dbxref=GenBank:WP_002211041.1;Name=WP_002211041.1;Ontology_term=GO:0003677;end_range=136000,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608238.1;locus_tag=YPIP275_RS15180;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_002211041.1;transl_table=11 ##sequence-region NZ_AAOS02000014.1 1 147008 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000014.1 RefSeq region 1 147008 . + . ID=NZ_AAOS02000014.1:1..147008;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000014.1 RefSeq gene 2 259 . - . ID=gene-YPIP275_RS13920;Name=YPIP275_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13920;old_locus_tag=YPIP275_0479 NZ_AAOS02000014.1 Protein Homology CDS 2 259 . - 0 ID=cds-WP_002224323.1;Parent=gene-YPIP275_RS13920;Dbxref=GenBank:WP_002224323.1;Name=WP_002224323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430100.1;locus_tag=YPIP275_RS13920;product=type 1 periplasmic-binding domain-containing protein;protein_id=WP_002224323.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 275 1057 . - . ID=gene-YPIP275_RS13925;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13925;old_locus_tag=YPIP275_0480 NZ_AAOS02000014.1 Protein Homology CDS 275 1057 . - 0 ID=cds-WP_001317493.1-23;Parent=gene-YPIP275_RS13925;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS13925;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 1054 2076 . - . ID=gene-YPIP275_RS13930;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13930;old_locus_tag=YPIP275_0481 NZ_AAOS02000014.1 Protein Homology CDS 1054 2076 . - 0 ID=cds-WP_000255944.1-19;Parent=gene-YPIP275_RS13930;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS13930;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 2090 2977 . - . ID=gene-YPIP275_RS13935;Name=YPIP275_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13935;old_locus_tag=YPIP275_0482 NZ_AAOS02000014.1 Protein Homology CDS 2090 2977 . - 0 ID=cds-WP_002216469.1;Parent=gene-YPIP275_RS13935;Dbxref=GenBank:WP_002216469.1;Name=WP_002216469.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230719.1;locus_tag=YPIP275_RS13935;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002216469.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 3452 4660 . - . ID=gene-YPIP275_RS13940;Name=YPIP275_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13940;old_locus_tag=YPIP275_0483 NZ_AAOS02000014.1 Protein Homology CDS 3452 4660 . - 0 ID=cds-WP_002209743.1-14;Parent=gene-YPIP275_RS13940;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS13940;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 4708 5058 . - . ID=gene-YPIP275_RS13945;Name=YPIP275_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13945;old_locus_tag=YPIP275_0484 NZ_AAOS02000014.1 Protein Homology CDS 4708 5058 . - 0 ID=cds-WP_002210828.1;Parent=gene-YPIP275_RS13945;Dbxref=GenBank:WP_002210828.1;Name=WP_002210828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210828.1;locus_tag=YPIP275_RS13945;product=cupin domain-containing protein;protein_id=WP_002210828.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 5394 6230 . + . ID=gene-YPIP275_RS13950;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=YPIP275_RS13950;old_locus_tag=YPIP275_0485 NZ_AAOS02000014.1 Protein Homology CDS 5394 6230 . + 0 ID=cds-WP_002210829.1;Parent=gene-YPIP275_RS13950;Dbxref=GenBank:WP_002210829.1;Name=WP_002210829.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713043.1;locus_tag=YPIP275_RS13950;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_002210829.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 6322 7083 . + . ID=gene-YPIP275_RS13955;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=YPIP275_RS13955;old_locus_tag=YPIP275_0486 NZ_AAOS02000014.1 Protein Homology CDS 6322 7083 . + 0 ID=cds-WP_002210830.1;Parent=gene-YPIP275_RS13955;Dbxref=GenBank:WP_002210830.1;Name=WP_002210830.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228631.1;locus_tag=YPIP275_RS13955;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_002210830.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 7419 9086 . + . ID=gene-YPIP275_RS13960;Name=YPIP275_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13960;old_locus_tag=YPIP275_0487 NZ_AAOS02000014.1 Protein Homology CDS 7419 9086 . + 0 ID=cds-WP_002210831.1;Parent=gene-YPIP275_RS13960;Dbxref=GenBank:WP_002210831.1;Name=WP_002210831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229773.1;locus_tag=YPIP275_RS13960;product=pectate disaccharide-lyase;protein_id=WP_002210831.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 9127 10017 . + . ID=gene-YPIP275_RS13965;Name=YPIP275_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13965;old_locus_tag=YPIP275_0488 NZ_AAOS02000014.1 Protein Homology CDS 9127 10017 . + 0 ID=cds-WP_002210832.1;Parent=gene-YPIP275_RS13965;Dbxref=GenBank:WP_002210832.1;Name=WP_002210832.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017802312.1;locus_tag=YPIP275_RS13965;product=carbohydrate ABC transporter permease;protein_id=WP_002210832.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 10010 10930 . + . ID=gene-YPIP275_RS13970;Name=YPIP275_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13970;old_locus_tag=YPIP275_0489 NZ_AAOS02000014.1 Protein Homology CDS 10010 10930 . + 0 ID=cds-WP_002210833.1;Parent=gene-YPIP275_RS13970;Dbxref=GenBank:WP_002210833.1;Name=WP_002210833.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583148.1;locus_tag=YPIP275_RS13970;product=carbohydrate ABC transporter permease;protein_id=WP_002210833.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 10944 12071 . + . ID=gene-YPIP275_RS13975;Name=YPIP275_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13975;old_locus_tag=YPIP275_0490 NZ_AAOS02000014.1 Protein Homology CDS 10944 12071 . + 0 ID=cds-WP_002210834.1;Parent=gene-YPIP275_RS13975;Dbxref=GenBank:WP_002210834.1;Name=WP_002210834.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228623.1;locus_tag=YPIP275_RS13975;product=ABC transporter ATP-binding protein;protein_id=WP_002210834.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 12087 13379 . + . ID=gene-YPIP275_RS13980;Name=YPIP275_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13980;old_locus_tag=YPIP275_0491 NZ_AAOS02000014.1 Protein Homology CDS 12087 13379 . + 0 ID=cds-WP_002210835.1;Parent=gene-YPIP275_RS13980;Dbxref=GenBank:WP_002210835.1;Name=WP_002210835.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229775.1;locus_tag=YPIP275_RS13980;product=ABC transporter substrate-binding protein;protein_id=WP_002210835.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 13677 14387 . + . ID=gene-YPIP275_RS13985;Name=YPIP275_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13985;old_locus_tag=YPIP275_0492 NZ_AAOS02000014.1 Protein Homology CDS 13677 14387 . + 0 ID=cds-WP_002210836.1;Parent=gene-YPIP275_RS13985;Dbxref=GenBank:WP_002210836.1;Name=WP_002210836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210836.1;locus_tag=YPIP275_RS13985;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_002210836.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 14867 15415 . + . ID=gene-YPIP275_RS13990;Name=YPIP275_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13990;old_locus_tag=YPIP275_0493 NZ_AAOS02000014.1 Protein Homology CDS 14867 15415 . + 0 ID=cds-WP_002210837.1;Parent=gene-YPIP275_RS13990;Dbxref=GenBank:WP_002210837.1;Name=WP_002210837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674211.1;locus_tag=YPIP275_RS13990;product=metal-dependent hydrolase;protein_id=WP_002210837.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 15619 17010 . + . ID=gene-YPIP275_RS13995;Name=YPIP275_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13995;old_locus_tag=YPIP275_0494 NZ_AAOS02000014.1 Protein Homology CDS 15619 17010 . + 0 ID=cds-WP_002210838.1;Parent=gene-YPIP275_RS13995;Dbxref=GenBank:WP_002210838.1;Name=WP_002210838.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460286.1;locus_tag=YPIP275_RS13995;product=L-cystine transporter;protein_id=WP_002210838.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 17225 18076 . - . ID=gene-YPIP275_RS14000;Name=YPIP275_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14000;old_locus_tag=YPIP275_0495 NZ_AAOS02000014.1 Protein Homology CDS 17225 18076 . - 0 ID=cds-WP_002210839.1;Parent=gene-YPIP275_RS14000;Dbxref=GenBank:WP_002210839.1;Name=WP_002210839.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304011.1;locus_tag=YPIP275_RS14000;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002210839.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 18461 19252 . - . ID=gene-YPIP275_RS14005;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=YPIP275_RS14005;old_locus_tag=YPIP275_0496 NZ_AAOS02000014.1 Protein Homology CDS 18461 19252 . - 0 ID=cds-WP_002210840.1;Parent=gene-YPIP275_RS14005;Dbxref=GenBank:WP_002210840.1;Name=WP_002210840.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416341.1;locus_tag=YPIP275_RS14005;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_002210840.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 19439 20605 . - . ID=gene-YPIP275_RS14010;Name=ogl;gbkey=Gene;gene=ogl;gene_biotype=protein_coding;locus_tag=YPIP275_RS14010;old_locus_tag=YPIP275_0497 NZ_AAOS02000014.1 Protein Homology CDS 19439 20605 . - 0 ID=cds-WP_002210841.1;Parent=gene-YPIP275_RS14010;Dbxref=GenBank:WP_002210841.1;Name=WP_002210841.1;gbkey=CDS;gene=ogl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816209.1;locus_tag=YPIP275_RS14010;product=oligogalacturonate lyase;protein_id=WP_002210841.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 20932 22299 . + . ID=gene-YPIP275_RS14015;Name=YPIP275_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14015;old_locus_tag=YPIP275_0498 NZ_AAOS02000014.1 Protein Homology CDS 20932 22299 . + 0 ID=cds-WP_002210842.1;Parent=gene-YPIP275_RS14015;Dbxref=GenBank:WP_002210842.1;Name=WP_002210842.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230240.1;locus_tag=YPIP275_RS14015;product=MFS transporter;protein_id=WP_002210842.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 22353 23156 . - . ID=gene-YPIP275_RS14020;Name=YPIP275_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14020;old_locus_tag=YPIP275_0499 NZ_AAOS02000014.1 Protein Homology CDS 22353 23156 . - 0 ID=cds-WP_002210843.1;Parent=gene-YPIP275_RS14020;Dbxref=GenBank:WP_002210843.1;Name=WP_002210843.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210843.1;locus_tag=YPIP275_RS14020;product=fimbrial biogenesis chaperone;protein_id=WP_002210843.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 23153 24316 . - . ID=gene-YPIP275_RS14025;Name=YPIP275_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14025;old_locus_tag=YPIP275_0500 NZ_AAOS02000014.1 Protein Homology CDS 23153 24316 . - 0 ID=cds-WP_002215120.1;Parent=gene-YPIP275_RS14025;Dbxref=GenBank:WP_002215120.1;Name=WP_002215120.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215120.1;locus_tag=YPIP275_RS14025;product=fimbrial protein;protein_id=WP_002215120.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 24313 26925 . - . ID=gene-YPIP275_RS14030;Name=YPIP275_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14030;old_locus_tag=YPIP275_0501 NZ_AAOS02000014.1 Protein Homology CDS 24313 26925 . - 0 ID=cds-WP_002210844.1;Parent=gene-YPIP275_RS14030;Dbxref=GenBank:WP_002210844.1;Name=WP_002210844.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228489.1;locus_tag=YPIP275_RS14030;product=fimbria/pilus outer membrane usher protein;protein_id=WP_002210844.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 27007 27786 . - . ID=gene-YPIP275_RS14035;Name=YPIP275_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14035;old_locus_tag=YPIP275_0502 NZ_AAOS02000014.1 Protein Homology CDS 27007 27786 . - 0 ID=cds-WP_002215118.1;Parent=gene-YPIP275_RS14035;Dbxref=GenBank:WP_002215118.1;Name=WP_002215118.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304009.1;locus_tag=YPIP275_RS14035;product=fimbrial biogenesis chaperone;protein_id=WP_002215118.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 27939 28481 . - . ID=gene-YPIP275_RS14040;Name=YPIP275_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14040;old_locus_tag=YPIP275_0503 NZ_AAOS02000014.1 Protein Homology CDS 27939 28481 . - 0 ID=cds-WP_002210846.1;Parent=gene-YPIP275_RS14040;Dbxref=GenBank:WP_002210846.1;Name=WP_002210846.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210846.1;locus_tag=YPIP275_RS14040;product=fimbrial protein;protein_id=WP_002210846.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 29139 30020 . - . ID=gene-YPIP275_RS14045;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=YPIP275_RS14045;old_locus_tag=YPIP275_0504 NZ_AAOS02000014.1 Protein Homology CDS 29139 30020 . - 0 ID=cds-WP_002210847.1;Parent=gene-YPIP275_RS14045;Dbxref=GenBank:WP_002210847.1;Name=WP_002210847.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144856.1;locus_tag=YPIP275_RS14045;product=protease HtpX;protein_id=WP_002210847.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 30494 32566 . - . ID=gene-YPIP275_RS14050;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;gene_synonym=tsp;locus_tag=YPIP275_RS14050;old_locus_tag=YPIP275_0505 NZ_AAOS02000014.1 Protein Homology CDS 30494 32566 . - 0 ID=cds-WP_002210848.1;Parent=gene-YPIP275_RS14050;Dbxref=GenBank:WP_002210848.1;Name=WP_002210848.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210848.1;locus_tag=YPIP275_RS14050;product=carboxy terminal-processing peptidase;protein_id=WP_002210848.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 32586 33299 . - . ID=gene-YPIP275_RS14055;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS14055;old_locus_tag=YPIP275_0506 NZ_AAOS02000014.1 Protein Homology CDS 32586 33299 . - 0 ID=cds-WP_002210849.1;Parent=gene-YPIP275_RS14055;Dbxref=GenBank:WP_002210849.1;Name=WP_002210849.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004723358.1;locus_tag=YPIP275_RS14055;product=RNA chaperone ProQ;protein_id=WP_002210849.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 33395 33892 . - . ID=gene-YPIP275_RS14060;Name=YPIP275_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14060;old_locus_tag=YPIP275_0507 NZ_AAOS02000014.1 Protein Homology CDS 33395 33892 . - 0 ID=cds-WP_002210850.1;Parent=gene-YPIP275_RS14060;Dbxref=GenBank:WP_002210850.1;Name=WP_002210850.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210850.1;locus_tag=YPIP275_RS14060;product=GAF domain-containing protein;protein_id=WP_002210850.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 34124 35371 . + . ID=gene-YPIP275_RS14065;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=YPIP275_RS14065;old_locus_tag=YPIP275_0508 NZ_AAOS02000014.1 Protein Homology CDS 34124 35371 . + 0 ID=cds-WP_002367629.1;Parent=gene-YPIP275_RS14065;Dbxref=GenBank:WP_002367629.1;Name=WP_002367629.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002367629.1;locus_tag=YPIP275_RS14065;product=membrane integrity lipid transport subunit YebS;protein_id=WP_002367629.1;transl_table=11 NZ_AAOS02000014.1 RefSeq pseudogene 35340 37990 . + . ID=gene-YPIP275_RS14070;Name=YPIP275_RS14070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS14070;old_locus_tag=YPIP275_0509;pseudo=true NZ_AAOS02000014.1 Protein Homology CDS 35340 37990 . + 0 ID=cds-YPIP275_RS14070;Parent=gene-YPIP275_RS14070;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216616.1;locus_tag=YPIP275_RS14070;product=PqiB family protein;pseudo=true;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 38469 39023 . + . ID=gene-YPIP275_RS14075;Name=YPIP275_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14075;old_locus_tag=YPIP275_0511 NZ_AAOS02000014.1 Protein Homology CDS 38469 39023 . + 0 ID=cds-WP_002210852.1;Parent=gene-YPIP275_RS14075;Dbxref=GenBank:WP_002210852.1;Name=WP_002210852.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210852.1;locus_tag=YPIP275_RS14075;product=Csu type fimbrial protein;protein_id=WP_002210852.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 39029 39559 . + . ID=gene-YPIP275_RS14080;Name=YPIP275_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14080;old_locus_tag=YPIP275_0512 NZ_AAOS02000014.1 Protein Homology CDS 39029 39559 . + 0 ID=cds-WP_002216613.1;Parent=gene-YPIP275_RS14080;Dbxref=GenBank:WP_002216613.1;Name=WP_002216613.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413759.1;locus_tag=YPIP275_RS14080;product=Csu type fimbrial protein;protein_id=WP_002216613.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 39580 40137 . + . ID=gene-YPIP275_RS14085;Name=YPIP275_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14085 NZ_AAOS02000014.1 Protein Homology CDS 39580 40137 . + 0 ID=cds-WP_002216611.1;Parent=gene-YPIP275_RS14085;Dbxref=GenBank:WP_002216611.1;Name=WP_002216611.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216611.1;locus_tag=YPIP275_RS14085;product=Csu type fimbrial protein;protein_id=WP_002216611.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 40168 40920 . + . ID=gene-YPIP275_RS14090;Name=YPIP275_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14090;old_locus_tag=YPIP275_0515 NZ_AAOS02000014.1 Protein Homology CDS 40168 40920 . + 0 ID=cds-WP_002210856.1;Parent=gene-YPIP275_RS14090;Dbxref=GenBank:WP_002210856.1;Name=WP_002210856.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105005.1;locus_tag=YPIP275_RS14090;product=fimbrial biogenesis chaperone;protein_id=WP_002210856.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 41091 43538 . + . ID=gene-YPIP275_RS14095;Name=YPIP275_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14095;old_locus_tag=YPIP275_0516 NZ_AAOS02000014.1 Protein Homology CDS 41091 43538 . + 0 ID=cds-WP_002210857.1;Parent=gene-YPIP275_RS14095;Dbxref=GenBank:WP_002210857.1;Name=WP_002210857.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229783.1;locus_tag=YPIP275_RS14095;product=fimbria/pilus outer membrane usher protein;protein_id=WP_002210857.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 43744 44733 . + . ID=gene-YPIP275_RS14100;Name=YPIP275_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14100;old_locus_tag=YPIP275_0517 NZ_AAOS02000014.1 Protein Homology CDS 43744 44733 . + 0 ID=cds-WP_002210858.1;Parent=gene-YPIP275_RS14100;Dbxref=GenBank:WP_002210858.1;Name=WP_002210858.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230846.1;locus_tag=YPIP275_RS14100;product=Csu type fimbrial protein;protein_id=WP_002210858.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 44941 45180 . + . ID=gene-YPIP275_RS14105;Name=YPIP275_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14105;old_locus_tag=YPIP275_0518 NZ_AAOS02000014.1 Protein Homology CDS 44941 45180 . + 0 ID=cds-WP_002210859.1;Parent=gene-YPIP275_RS14105;Dbxref=GenBank:WP_002210859.1;Name=WP_002210859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304004.1;locus_tag=YPIP275_RS14105;product=YebV family protein;protein_id=WP_002210859.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 45290 45679 . - . ID=gene-YPIP275_RS14110;Name=YPIP275_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14110;old_locus_tag=YPIP275_0519 NZ_AAOS02000014.1 Protein Homology CDS 45290 45679 . - 0 ID=cds-WP_002215943.1;Parent=gene-YPIP275_RS14110;Dbxref=GenBank:WP_002215943.1;Name=WP_002215943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192562.1;locus_tag=YPIP275_RS14110;product=ASCH domain-containing protein;protein_id=WP_002215943.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 45954 46004 . + . ID=gene-YPIP275_RS29230;Name=YPIP275_RS29230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29230 NZ_AAOS02000014.1 Protein Homology CDS 45954 46004 . + 0 ID=cds-WP_371388447.1;Parent=gene-YPIP275_RS29230;Dbxref=GenBank:WP_371388447.1;Name=WP_371388447.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041491.1;locus_tag=YPIP275_RS29230;product=hypothetical protein;protein_id=WP_371388447.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 46086 47108 . + . ID=gene-YPIP275_RS14115;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14115;old_locus_tag=YPIP275_0521 NZ_AAOS02000014.1 Protein Homology CDS 46086 47108 . + 0 ID=cds-WP_000255944.1-20;Parent=gene-YPIP275_RS14115;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS14115;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 47105 47887 . + . ID=gene-YPIP275_RS14120;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS14120;old_locus_tag=YPIP275_0522 NZ_AAOS02000014.1 Protein Homology CDS 47105 47887 . + 0 ID=cds-WP_001317493.1-24;Parent=gene-YPIP275_RS14120;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS14120;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 47990 48163 . - . ID=gene-YPIP275_RS28765;Name=YPIP275_RS28765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28765;old_locus_tag=YPIP275_0523 NZ_AAOS02000014.1 Protein Homology CDS 47990 48163 . - 0 ID=cds-WP_002210861.1;Parent=gene-YPIP275_RS28765;Dbxref=GenBank:WP_002210861.1;Name=WP_002210861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210861.1;locus_tag=YPIP275_RS28765;product=YnfU family zinc-binding protein;protein_id=WP_002210861.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 48422 48655 . - . ID=gene-YPIP275_RS14125;Name=YPIP275_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14125;old_locus_tag=YPIP275_0524 NZ_AAOS02000014.1 Protein Homology CDS 48422 48655 . - 0 ID=cds-WP_002210862.1;Parent=gene-YPIP275_RS14125;Dbxref=GenBank:WP_002210862.1;Name=WP_002210862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005272441.1;locus_tag=YPIP275_RS14125;product=hypothetical protein;protein_id=WP_002210862.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 48810 50066 . - . ID=gene-YPIP275_RS14130;Name=YPIP275_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14130;old_locus_tag=YPIP275_0525 NZ_AAOS02000014.1 Protein Homology CDS 48810 50066 . - 0 ID=cds-WP_002210864.1;Parent=gene-YPIP275_RS14130;Dbxref=GenBank:WP_002210864.1;Name=WP_002210864.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413761.1;locus_tag=YPIP275_RS14130;product=patatin-like phospholipase family protein;protein_id=WP_002210864.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 50459 50707 . - . ID=gene-YPIP275_RS14135;Name=YPIP275_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14135;old_locus_tag=YPIP275_0527 NZ_AAOS02000014.1 Protein Homology CDS 50459 50707 . - 0 ID=cds-WP_002210865.1;Parent=gene-YPIP275_RS14135;Dbxref=GenBank:WP_002210865.1;Name=WP_002210865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210865.1;locus_tag=YPIP275_RS14135;product=hypothetical protein;protein_id=WP_002210865.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 51286 51480 . + . ID=gene-YPIP275_RS14140;Name=YPIP275_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14140;old_locus_tag=YPIP275_0529 NZ_AAOS02000014.1 Protein Homology CDS 51286 51480 . + 0 ID=cds-WP_002210867.1;Parent=gene-YPIP275_RS14140;Dbxref=GenBank:WP_002210867.1;Name=WP_002210867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210867.1;locus_tag=YPIP275_RS14140;product=hypothetical protein;protein_id=WP_002210867.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 51882 53111 . + . ID=gene-YPIP275_RS14145;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=YPIP275_RS14145;old_locus_tag=YPIP275_0530 NZ_AAOS02000014.1 Protein Homology CDS 51882 53111 . + 0 ID=cds-WP_002210868.1;Parent=gene-YPIP275_RS14145;Dbxref=GenBank:WP_002210868.1;Name=WP_002210868.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210868.1;locus_tag=YPIP275_RS14145;product=alanine racemase;protein_id=WP_002210868.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 53730 54683 . - . ID=gene-YPIP275_RS14150;Name=YPIP275_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14150;old_locus_tag=YPIP275_0531 NZ_AAOS02000014.1 Protein Homology CDS 53730 54683 . - 0 ID=cds-WP_002210869.1;Parent=gene-YPIP275_RS14150;Dbxref=GenBank:WP_002210869.1;Name=WP_002210869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304001.1;locus_tag=YPIP275_RS14150;product=hypothetical protein;protein_id=WP_002210869.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 54783 55301 . - . ID=gene-YPIP275_RS14155;Name=YPIP275_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14155;old_locus_tag=YPIP275_0532 NZ_AAOS02000014.1 Protein Homology CDS 54783 55301 . - 0 ID=cds-WP_002229223.1;Parent=gene-YPIP275_RS14155;Dbxref=GenBank:WP_002229223.1;Name=WP_002229223.1;Ontology_term=GO:0007155,GO:0015031;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: protein motif:HMM:NF015831.7;locus_tag=YPIP275_RS14155;product=YadA family autotransporter adhesin;protein_id=WP_002229223.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 55204 57891 . - . ID=gene-YPIP275_RS14160;Name=YPIP275_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14160;old_locus_tag=YPIP275_0533 NZ_AAOS02000014.1 Protein Homology CDS 55204 57891 . - 0 ID=cds-WP_071600181.1;Parent=gene-YPIP275_RS14160;Dbxref=GenBank:WP_071600181.1;Name=WP_071600181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229960.1;locus_tag=YPIP275_RS14160;product=beta strand repeat-containing protein;protein_id=WP_071600181.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 58248 59012 . - . ID=gene-YPIP275_RS14165;Name=YPIP275_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14165;old_locus_tag=YPIP275_0534 NZ_AAOS02000014.1 Protein Homology CDS 58248 59012 . - 0 ID=cds-WP_002210870.1;Parent=gene-YPIP275_RS14165;Dbxref=GenBank:WP_002210870.1;Name=WP_002210870.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210870.1;locus_tag=YPIP275_RS14165;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002210870.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 59577 60221 . - . ID=gene-YPIP275_RS14175;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=YPIP275_RS14175;old_locus_tag=YPIP275_0536 NZ_AAOS02000014.1 Protein Homology CDS 59577 60221 . - 0 ID=cds-WP_002210872.1;Parent=gene-YPIP275_RS14175;Dbxref=GenBank:WP_002210872.1;Name=WP_002210872.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210872.1;locus_tag=YPIP275_RS14175;product=protein phosphatase CheZ;protein_id=WP_002210872.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 60231 60620 . - . ID=gene-YPIP275_RS14180;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=YPIP275_RS14180;old_locus_tag=YPIP275_0537 NZ_AAOS02000014.1 Protein Homology CDS 60231 60620 . - 0 ID=cds-WP_002210873.1;Parent=gene-YPIP275_RS14180;Dbxref=GenBank:WP_002210873.1;Name=WP_002210873.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=YPIP275_RS14180;product=chemotaxis response regulator CheY;protein_id=WP_002210873.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 60721 61770 . - . ID=gene-YPIP275_RS14185;Name=YPIP275_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14185;old_locus_tag=YPIP275_0538 NZ_AAOS02000014.1 Protein Homology CDS 60721 61770 . - 0 ID=cds-WP_002210874.1;Parent=gene-YPIP275_RS14185;Dbxref=GenBank:WP_002210874.1;Name=WP_002210874.1;Ontology_term=GO:0006482,GO:0006935,GO:0018277,GO:0000156,GO:0008984,GO:0050568,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphorelay response regulator activity|0000156||IEA,protein-glutamate methylesterase activity|0008984||IEA,protein-glutamine glutaminase activity|0050568||IEA;go_process=protein demethylation|0006482||IEA,chemotaxis|0006935||IEA,protein deamination|0018277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=YPIP275_RS14185;product=protein-glutamate methylesterase/protein-glutamine glutaminase;protein_id=WP_002210874.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 61770 62642 . - . ID=gene-YPIP275_RS14190;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=YPIP275_RS14190;old_locus_tag=YPIP275_0539 NZ_AAOS02000014.1 Protein Homology CDS 61770 62642 . - 0 ID=cds-WP_002214065.1;Parent=gene-YPIP275_RS14190;Dbxref=GenBank:WP_002214065.1;Name=WP_002214065.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214065.1;locus_tag=YPIP275_RS14190;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_002214065.1;transl_table=11 NZ_AAOS02000014.1 RefSeq pseudogene 62815 64425 . - . ID=gene-YPIP275_RS14200;Name=YPIP275_RS14200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS14200;old_locus_tag=YPIP275_0541;pseudo=true NZ_AAOS02000014.1 Protein Homology CDS 62815 64425 . - 0 ID=cds-YPIP275_RS14200;Parent=gene-YPIP275_RS14200;Note=internal stop;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413766.1;locus_tag=YPIP275_RS14200;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 64609 66282 . - . ID=gene-YPIP275_RS14205;Name=YPIP275_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14205;old_locus_tag=YPIP275_0542 NZ_AAOS02000014.1 Protein Homology CDS 64609 66282 . - 0 ID=cds-WP_002210876.1;Parent=gene-YPIP275_RS14205;Dbxref=GenBank:WP_002210876.1;Name=WP_002210876.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210876.1;locus_tag=YPIP275_RS14205;product=methyl-accepting chemotaxis protein;protein_id=WP_002210876.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 66523 67224 . - . ID=gene-YPIP275_RS14210;Name=YPIP275_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14210;old_locus_tag=YPIP275_0543 NZ_AAOS02000014.1 Protein Homology CDS 66523 67224 . - 0 ID=cds-WP_002214064.1;Parent=gene-YPIP275_RS14210;Dbxref=GenBank:WP_002214064.1;Name=WP_002214064.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214064.1;locus_tag=YPIP275_RS14210;product=YidX family protein;protein_id=WP_002214064.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 67293 70169 . - . ID=gene-YPIP275_RS14215;Name=YPIP275_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14215;old_locus_tag=YPIP275_0544 NZ_AAOS02000014.1 Protein Homology CDS 67293 70169 . - 0 ID=cds-WP_002210878.1;Parent=gene-YPIP275_RS14215;Dbxref=GenBank:WP_002210878.1;Name=WP_002210878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257988.1;locus_tag=YPIP275_RS14215;product=DUF2339 domain-containing protein;protein_id=WP_002210878.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 70697 74503 . - . ID=gene-YPIP275_RS14220;Name=yapJ;gbkey=Gene;gene=yapJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS14220;old_locus_tag=YPIP275_0546 NZ_AAOS02000014.1 Protein Homology CDS 70697 74503 . - 0 ID=cds-WP_002210880.1;Parent=gene-YPIP275_RS14220;Dbxref=GenBank:WP_002210880.1;Name=WP_002210880.1;gbkey=CDS;gene=yapJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210880.1;locus_tag=YPIP275_RS14220;product=autotransporter adhesin YapJ;protein_id=WP_002210880.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 74978 75643 . - . ID=gene-YPIP275_RS14225;Name=YPIP275_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14225;old_locus_tag=YPIP275_0547 NZ_AAOS02000014.1 Protein Homology CDS 74978 75643 . - 0 ID=cds-WP_002210881.1;Parent=gene-YPIP275_RS14225;Dbxref=GenBank:WP_002210881.1;Name=WP_002210881.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210881.1;locus_tag=YPIP275_RS14225;product=helix-turn-helix transcriptional regulator;protein_id=WP_002210881.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 75833 76819 . + . ID=gene-YPIP275_RS14230;Name=YPIP275_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14230;old_locus_tag=YPIP275_0548 NZ_AAOS02000014.1 Protein Homology CDS 75833 76819 . + 0 ID=cds-WP_002210882.1;Parent=gene-YPIP275_RS14230;Dbxref=GenBank:WP_002210882.1;Name=WP_002210882.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210882.1;locus_tag=YPIP275_RS14230;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_002210882.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 76816 77193 . + . ID=gene-YPIP275_RS14235;Name=YPIP275_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14235;old_locus_tag=YPIP275_0549 NZ_AAOS02000014.1 Protein Homology CDS 76816 77193 . + 0 ID=cds-WP_002210883.1;Parent=gene-YPIP275_RS14235;Dbxref=GenBank:WP_002210883.1;Name=WP_002210883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210883.1;locus_tag=YPIP275_RS14235;product=RidA family protein;protein_id=WP_002210883.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 77206 78441 . + . ID=gene-YPIP275_RS14240;Name=YPIP275_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14240;old_locus_tag=YPIP275_0550 NZ_AAOS02000014.1 Protein Homology CDS 77206 78441 . + 0 ID=cds-WP_002210884.1;Parent=gene-YPIP275_RS14240;Dbxref=GenBank:WP_002210884.1;Name=WP_002210884.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210884.1;locus_tag=YPIP275_RS14240;product=MFS transporter;protein_id=WP_002210884.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 78733 79230 . - . ID=gene-YPIP275_RS14245;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=YPIP275_RS14245;old_locus_tag=YPIP275_0551 NZ_AAOS02000014.1 Protein Homology CDS 78733 79230 . - 0 ID=cds-WP_002210885.1;Parent=gene-YPIP275_RS14245;Dbxref=GenBank:WP_002210885.1;Name=WP_002210885.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210885.1;locus_tag=YPIP275_RS14245;product=chemotaxis protein CheW;protein_id=WP_002210885.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 79393 81558 . - . ID=gene-YPIP275_RS14250;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14250;old_locus_tag=YPIP275_0552 NZ_AAOS02000014.1 Protein Homology CDS 79393 81558 . - 0 ID=cds-WP_002210886.1;Parent=gene-YPIP275_RS14250;Dbxref=GenBank:WP_002210886.1;Name=WP_002210886.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210886.1;locus_tag=YPIP275_RS14250;product=chemotaxis protein CheA;protein_id=WP_002210886.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 81575 82858 . - . ID=gene-YPIP275_RS29235;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=YPIP275_RS29235;old_locus_tag=YPIP275_0553 NZ_AAOS02000014.1 Protein Homology CDS 81575 82858 . - 0 ID=cds-WP_002210887.1;Parent=gene-YPIP275_RS29235;Dbxref=GenBank:WP_002210887.1;Name=WP_002210887.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214057.1;locus_tag=YPIP275_RS29235;product=flagellar motor protein MotB;protein_id=WP_002210887.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 82855 83742 . - . ID=gene-YPIP275_RS14260;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14260;old_locus_tag=YPIP275_0554 NZ_AAOS02000014.1 Protein Homology CDS 82855 83742 . - 0 ID=cds-WP_002210888.1;Parent=gene-YPIP275_RS14260;Dbxref=GenBank:WP_002210888.1;Name=WP_002210888.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906290.1;locus_tag=YPIP275_RS14260;product=flagellar motor stator protein MotA;protein_id=WP_002210888.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 83947 84528 . - . ID=gene-YPIP275_RS14265;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=YPIP275_RS14265;old_locus_tag=YPIP275_0555 NZ_AAOS02000014.1 Protein Homology CDS 83947 84528 . - 0 ID=cds-WP_002210889.1;Parent=gene-YPIP275_RS14265;Dbxref=GenBank:WP_002210889.1;Name=WP_002210889.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934888.1;locus_tag=YPIP275_RS14265;product=flagellar transcriptional regulator FlhC;protein_id=WP_002210889.1;transl_table=11 NZ_AAOS02000014.1 RefSeq pseudogene 84532 84883 . - . ID=gene-YPIP275_RS14270;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=pseudogene;locus_tag=YPIP275_RS14270;old_locus_tag=YPIP275_0556;pseudo=true NZ_AAOS02000014.1 Protein Homology CDS 84532 84883 . - 0 ID=cds-YPIP275_RS14270;Parent=gene-YPIP275_RS14270;Note=frameshifted;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847229.1;locus_tag=YPIP275_RS14270;product=flagellar transcriptional regulator FlhD;pseudo=true;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 86071 88770 . - . ID=gene-YPIP275_RS14275;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14275;old_locus_tag=YPIP275_0557 NZ_AAOS02000014.1 Protein Homology CDS 86071 88770 . - 0 ID=cds-WP_002210890.1;Parent=gene-YPIP275_RS14275;Dbxref=GenBank:WP_002210890.1;Name=WP_002210890.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210890.1;locus_tag=YPIP275_RS14275;product=magnesium-translocating P-type ATPase;protein_id=WP_002210890.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 89171 89869 . - . ID=gene-YPIP275_RS14280;Name=YPIP275_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14280;old_locus_tag=YPIP275_0558 NZ_AAOS02000014.1 Protein Homology CDS 89171 89869 . - 0 ID=cds-WP_002210891.1;Parent=gene-YPIP275_RS14280;Dbxref=GenBank:WP_002210891.1;Name=WP_002210891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210891.1;locus_tag=YPIP275_RS14280;product=MgtC family protein;protein_id=WP_002210891.1;transl_table=11 NZ_AAOS02000014.1 RefSeq pseudogene 90995 92729 . + . ID=gene-YPIP275_RS14290;Name=YPIP275_RS14290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS14290;old_locus_tag=YPIP275_0559;pseudo=true NZ_AAOS02000014.1 Protein Homology CDS 90995 92729 . + 0 ID=cds-YPIP275_RS14290;Parent=gene-YPIP275_RS14290;Note=frameshifted;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816624.1;locus_tag=YPIP275_RS14290;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 92912 93103 . - . ID=gene-YPIP275_RS28775;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=YPIP275_RS28775;old_locus_tag=YPIP275_0561 NZ_AAOS02000014.1 Protein Homology CDS 92912 93103 . - 0 ID=cds-WP_002210892.1;Parent=gene-YPIP275_RS28775;Dbxref=GenBank:WP_002210892.1;Name=WP_002210892.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210892.1;locus_tag=YPIP275_RS28775;product=protein DsrB;protein_id=WP_002210892.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 93318 93530 . - . ID=gene-YPIP275_RS14300;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=YPIP275_RS14300;old_locus_tag=YPIP275_0562 NZ_AAOS02000014.1 Protein Homology CDS 93318 93530 . - 0 ID=cds-WP_002210893.1;Parent=gene-YPIP275_RS14300;Dbxref=GenBank:WP_002210893.1;Name=WP_002210893.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935122.1;locus_tag=YPIP275_RS14300;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_002210893.1;transl_table=11 NZ_AAOS02000014.1 RefSeq pseudogene 94071 95819 . + . ID=gene-YPIP275_RS14305;Name=YPIP275_RS14305;end_range=95819,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS14305;old_locus_tag=YPIP275_0563;partial=true;pseudo=true NZ_AAOS02000014.1 Protein Homology CDS 94071 95819 . + 0 ID=cds-YPIP275_RS14305;Parent=gene-YPIP275_RS14305;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005975,GO:0004553;end_range=95819,.;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214048.1;locus_tag=YPIP275_RS14305;partial=true;product=glycoside hydrolase family 2 TIM barrel-domain containing protein;pseudo=true;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 95963 96421 . + . ID=gene-YPIP275_RS14310;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14310;old_locus_tag=YPIP275_0564 NZ_AAOS02000014.1 Protein Homology CDS 95963 96421 . + 0 ID=cds-WP_002213759.1-18;Parent=gene-YPIP275_RS14310;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS14310;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000014.1 RefSeq pseudogene 96524 97963 . + . ID=gene-YPIP275_RS14315;Name=YPIP275_RS14315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS14315;old_locus_tag=YPIP275_0565;partial=true;pseudo=true;start_range=.,96524 NZ_AAOS02000014.1 Protein Homology CDS 96524 97963 . + 0 ID=cds-YPIP275_RS14315;Parent=gene-YPIP275_RS14315;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975,GO:0004565,GO:0009341;gbkey=CDS;go_component=beta-galactosidase complex|0009341||IEA;go_function=beta-galactosidase activity|0004565||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214048.1;locus_tag=YPIP275_RS14315;partial=true;product=beta-galactosidase small subunit-related protein;pseudo=true;start_range=.,96524;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 98370 99380 . + . ID=gene-YPIP275_RS14320;Name=YPIP275_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14320;old_locus_tag=YPIP275_0567 NZ_AAOS02000014.1 Protein Homology CDS 98370 99380 . + 0 ID=cds-WP_002210897.1;Parent=gene-YPIP275_RS14320;Dbxref=GenBank:WP_002210897.1;Name=WP_002210897.1;Ontology_term=GO:0003960,GO:0048038,GO:0070402;gbkey=CDS;go_function=quinone reductase (NADPH) activity|0003960||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303993.1;locus_tag=YPIP275_RS14320;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_002210897.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 99663 100190 . + . ID=gene-YPIP275_RS14325;Name=YPIP275_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14325;old_locus_tag=YPIP275_0568 NZ_AAOS02000014.1 Protein Homology CDS 99663 100190 . + 0 ID=cds-WP_002210898.1;Parent=gene-YPIP275_RS14325;Dbxref=GenBank:WP_002210898.1;Name=WP_002210898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214045.1;locus_tag=YPIP275_RS14325;product=YlaC family protein;protein_id=WP_002210898.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 100681 101130 . + . ID=gene-YPIP275_RS14330;Name=YPIP275_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14330;old_locus_tag=YPIP275_0570 NZ_AAOS02000014.1 Protein Homology CDS 100681 101130 . + 0 ID=cds-WP_002210900.1;Parent=gene-YPIP275_RS14330;Dbxref=GenBank:WP_002210900.1;Name=WP_002210900.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210900.1;locus_tag=YPIP275_RS14330;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_002210900.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 101222 102121 . + . ID=gene-YPIP275_RS14335;Name=kdoO;gbkey=Gene;gene=kdoO;gene_biotype=protein_coding;locus_tag=YPIP275_RS14335;old_locus_tag=YPIP275_0571 NZ_AAOS02000014.1 Protein Homology CDS 101222 102121 . + 0 ID=cds-WP_002210901.1;Parent=gene-YPIP275_RS14335;Dbxref=GenBank:WP_002210901.1;Name=WP_002210901.1;gbkey=CDS;gene=kdoO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104991.1;locus_tag=YPIP275_RS14335;product=Kdo hydroxylase KdoO;protein_id=WP_002210901.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 102424 102627 . + . ID=gene-YPIP275_RS14340;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=YPIP275_RS14340;old_locus_tag=YPIP275_0572 NZ_AAOS02000014.1 Protein Homology CDS 102424 102627 . + 0 ID=cds-WP_002210902.1;Parent=gene-YPIP275_RS14340;Dbxref=GenBank:WP_002210902.1;Name=WP_002210902.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210902.1;locus_tag=YPIP275_RS14340;product=putative selenium delivery protein YdfZ;protein_id=WP_002210902.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 102929 104254 . - . ID=gene-YPIP275_RS14345;Name=YPIP275_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14345;old_locus_tag=YPIP275_0573 NZ_AAOS02000014.1 Protein Homology CDS 102929 104254 . - 0 ID=cds-WP_002210903.1;Parent=gene-YPIP275_RS14345;Dbxref=GenBank:WP_002210903.1;Name=WP_002210903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192581.1;locus_tag=YPIP275_RS14345;product=AppA family phytase/histidine-type acid phosphatase;protein_id=WP_002210903.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 104555 104728 . - . ID=gene-YPIP275_RS14350;Name=YPIP275_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14350;old_locus_tag=YPIP275_0574 NZ_AAOS02000014.1 Protein Homology CDS 104555 104728 . - 0 ID=cds-WP_002210904.1;Parent=gene-YPIP275_RS14350;Dbxref=GenBank:WP_002210904.1;Name=WP_002210904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210904.1;locus_tag=YPIP275_RS14350;product=hypothetical protein;protein_id=WP_002210904.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 104786 105169 . - . ID=gene-YPIP275_RS14355;Name=YPIP275_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14355;old_locus_tag=YPIP275_0575 NZ_AAOS02000014.1 Protein Homology CDS 104786 105169 . - 0 ID=cds-WP_002227977.1;Parent=gene-YPIP275_RS14355;Dbxref=GenBank:WP_002227977.1;Name=WP_002227977.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227977.1;locus_tag=YPIP275_RS14355;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_002227977.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 105329 106186 . + . ID=gene-YPIP275_RS14360;Name=YPIP275_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14360;old_locus_tag=YPIP275_0576 NZ_AAOS02000014.1 Protein Homology CDS 105329 106186 . + 0 ID=cds-WP_002210906.1;Parent=gene-YPIP275_RS14360;Dbxref=GenBank:WP_002210906.1;Name=WP_002210906.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303990.1;locus_tag=YPIP275_RS14360;product=SDR family oxidoreductase;protein_id=WP_002210906.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 107106 108686 . + . ID=gene-YPIP275_RS14365;Name=YPIP275_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14365;old_locus_tag=YPIP275_0577 NZ_AAOS02000014.1 Protein Homology CDS 107106 108686 . + 0 ID=cds-WP_002210907.1;Parent=gene-YPIP275_RS14365;Dbxref=GenBank:WP_002210907.1;Name=WP_002210907.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104988.1;locus_tag=YPIP275_RS14365;product=methyl-accepting chemotaxis protein;protein_id=WP_002210907.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 108806 109066 . + . ID=gene-YPIP275_RS14370;Name=YPIP275_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14370;old_locus_tag=YPIP275_0578 NZ_AAOS02000014.1 Protein Homology CDS 108806 109066 . + 0 ID=cds-WP_002210908.1;Parent=gene-YPIP275_RS14370;Dbxref=GenBank:WP_002210908.1;Name=WP_002210908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210908.1;locus_tag=YPIP275_RS14370;product=hypothetical protein;protein_id=WP_002210908.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 109342 110385 . + . ID=gene-YPIP275_RS14375;Name=YPIP275_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14375;old_locus_tag=YPIP275_0579 NZ_AAOS02000014.1 Protein Homology CDS 109342 110385 . + 0 ID=cds-WP_002210909.1;Parent=gene-YPIP275_RS14375;Dbxref=GenBank:WP_002210909.1;Name=WP_002210909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906293.1;locus_tag=YPIP275_RS14375;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002210909.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 110531 111784 . - . ID=gene-YPIP275_RS14380;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=YPIP275_RS14380;old_locus_tag=YPIP275_0580 NZ_AAOS02000014.1 Protein Homology CDS 110531 111784 . - 0 ID=cds-WP_002210910.1;Parent=gene-YPIP275_RS14380;Dbxref=GenBank:WP_002210910.1;Name=WP_002210910.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=YPIP275_RS14380;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_002210910.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 111915 112541 . + . ID=gene-YPIP275_RS14385;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=YPIP275_RS14385;old_locus_tag=YPIP275_0581 NZ_AAOS02000014.1 Protein Homology CDS 111915 112541 . + 0 ID=cds-WP_002218214.1;Parent=gene-YPIP275_RS14385;Dbxref=GenBank:WP_002218214.1;Name=WP_002218214.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218214.1;locus_tag=YPIP275_RS14385;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_002218214.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 112534 112980 . + . ID=gene-YPIP275_RS14390;Name=YPIP275_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14390;old_locus_tag=YPIP275_0582 NZ_AAOS02000014.1 Protein Homology CDS 112534 112980 . + 0 ID=cds-WP_002210912.1;Parent=gene-YPIP275_RS14390;Dbxref=GenBank:WP_002210912.1;Name=WP_002210912.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158032.1;locus_tag=YPIP275_RS14390;product=NUDIX hydrolase;protein_id=WP_002210912.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 113167 114282 . + . ID=gene-YPIP275_RS14395;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=YPIP275_RS14395;old_locus_tag=YPIP275_0583 NZ_AAOS02000014.1 Protein Homology CDS 113167 114282 . + 0 ID=cds-WP_002210913.1;Parent=gene-YPIP275_RS14395;Dbxref=GenBank:WP_002210913.1;Name=WP_002210913.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210913.1;locus_tag=YPIP275_RS14395;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_002210913.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 114340 114966 . + . ID=gene-YPIP275_RS14400;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=YPIP275_RS14400;old_locus_tag=YPIP275_0584 NZ_AAOS02000014.1 Protein Homology CDS 114340 114966 . + 0 ID=cds-WP_002210914.1;Parent=gene-YPIP275_RS14400;Dbxref=GenBank:WP_002210914.1;Name=WP_002210914.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210914.1;locus_tag=YPIP275_RS14400;product=high frequency lysogenization protein HflD;protein_id=WP_002210914.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 115027 116397 . + . ID=gene-YPIP275_RS14405;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=YPIP275_RS14405;old_locus_tag=YPIP275_0585 NZ_AAOS02000014.1 Protein Homology CDS 115027 116397 . + 0 ID=cds-WP_002210915.1;Parent=gene-YPIP275_RS14405;Dbxref=GenBank:WP_002210915.1;Name=WP_002210915.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309630.1;locus_tag=YPIP275_RS14405;product=adenylosuccinate lyase;protein_id=WP_002210915.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 116585 117208 . + . ID=gene-YPIP275_RS14410;Name=YPIP275_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14410;old_locus_tag=YPIP275_0586 NZ_AAOS02000014.1 Protein Homology CDS 116585 117208 . + 0 ID=cds-WP_002210916.1;Parent=gene-YPIP275_RS14410;Dbxref=GenBank:WP_002210916.1;Name=WP_002210916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210916.1;locus_tag=YPIP275_RS14410;product=YPO1635 family putative outer membrane beta-barrel protein;protein_id=WP_002210916.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 117419 118090 . + . ID=gene-YPIP275_RS14415;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=YPIP275_RS14415;old_locus_tag=YPIP275_0587 NZ_AAOS02000014.1 Protein Homology CDS 117419 118090 . + 0 ID=cds-WP_002210917.1;Parent=gene-YPIP275_RS14415;Dbxref=GenBank:WP_002210917.1;Name=WP_002210917.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256924.1;locus_tag=YPIP275_RS14415;product=two-component system response regulator PhoP;protein_id=WP_002210917.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 118096 119550 . + . ID=gene-YPIP275_RS14420;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS14420;old_locus_tag=YPIP275_0588 NZ_AAOS02000014.1 Protein Homology CDS 118096 119550 . + 0 ID=cds-WP_002210918.1;Parent=gene-YPIP275_RS14420;Dbxref=GenBank:WP_002210918.1;Name=WP_002210918.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210918.1;locus_tag=YPIP275_RS14420;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_002210918.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 119634 120755 . + . ID=gene-YPIP275_RS14425;Name=YPIP275_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14425;old_locus_tag=YPIP275_0589 NZ_AAOS02000014.1 Protein Homology CDS 119634 120755 . + 0 ID=cds-WP_002210919.1;Parent=gene-YPIP275_RS14425;Dbxref=GenBank:WP_002210919.1;Name=WP_002210919.1;Ontology_term=GO:0043687,GO:0008198,GO:0016706;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816139.1;locus_tag=YPIP275_RS14425;product=ribosomal protein uL16 3-hydroxylase;protein_id=WP_002210919.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 120988 122223 . - . ID=gene-YPIP275_RS14430;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=YPIP275_RS14430;old_locus_tag=YPIP275_0590 NZ_AAOS02000014.1 Protein Homology CDS 120988 122223 . - 0 ID=cds-WP_002210920.1;Parent=gene-YPIP275_RS14430;Dbxref=GenBank:WP_002210920.1;Name=WP_002210920.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004701588.1;locus_tag=YPIP275_RS14430;product=peptidase T;protein_id=WP_002210920.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 122553 123389 . - . ID=gene-YPIP275_RS14435;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=YPIP275_RS14435;old_locus_tag=YPIP275_0591 NZ_AAOS02000014.1 Protein Homology CDS 122553 123389 . - 0 ID=cds-WP_002210921.1;Parent=gene-YPIP275_RS14435;Dbxref=GenBank:WP_002210921.1;Name=WP_002210921.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079781.1;locus_tag=YPIP275_RS14435;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_002210921.1;transl_table=11 NZ_AAOS02000014.1 RefSeq pseudogene 123438 124353 . - . ID=gene-YPIP275_RS14440;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=pseudogene;locus_tag=YPIP275_RS14440;old_locus_tag=YPIP275_0592;pseudo=true NZ_AAOS02000014.1 Protein Homology CDS 123438 124353 . - 0 ID=cds-YPIP275_RS14440;Parent=gene-YPIP275_RS14440;Note=frameshifted;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158011.1;locus_tag=YPIP275_RS14440;product=N-acetylglucosamine kinase;pseudo=true;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 124372 125619 . - . ID=gene-YPIP275_RS14445;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=YPIP275_RS14445;old_locus_tag=YPIP275_0593 NZ_AAOS02000014.1 Protein Homology CDS 124372 125619 . - 0 ID=cds-WP_002210922.1;Parent=gene-YPIP275_RS14445;Dbxref=GenBank:WP_002210922.1;Name=WP_002210922.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192587.1;locus_tag=YPIP275_RS14445;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_002210922.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 125619 126323 . - . ID=gene-YPIP275_RS14450;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=YPIP275_RS14450;old_locus_tag=YPIP275_0594 NZ_AAOS02000014.1 Protein Homology CDS 125619 126323 . - 0 ID=cds-WP_002210923.1;Parent=gene-YPIP275_RS14450;Dbxref=GenBank:WP_002210923.1;Name=WP_002210923.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192588.1;locus_tag=YPIP275_RS14450;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_002210923.1;transl_table=11 NZ_AAOS02000014.1 RefSeq pseudogene 126316 127517 . - . ID=gene-YPIP275_RS14455;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=pseudogene;locus_tag=YPIP275_RS14455;old_locus_tag=YPIP275_0595;pseudo=true NZ_AAOS02000014.1 Protein Homology CDS 126316 127517 . - 0 ID=cds-YPIP275_RS14455;Parent=gene-YPIP275_RS14455;Note=frameshifted;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309521.1;locus_tag=YPIP275_RS14455;product=lipoprotein-releasing ABC transporter permease subunit LolC;pseudo=true;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 127787 131233 . + . ID=gene-YPIP275_RS14460;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=YPIP275_RS14460;old_locus_tag=YPIP275_0596 NZ_AAOS02000014.1 Protein Homology CDS 127787 131233 . + 0 ID=cds-WP_002210924.1;Parent=gene-YPIP275_RS14460;Dbxref=GenBank:WP_002210924.1;Name=WP_002210924.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192590.1;locus_tag=YPIP275_RS14460;product=transcription-repair coupling factor;protein_id=WP_002210924.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 131472 132011 . - . ID=gene-YPIP275_RS14465;Name=YPIP275_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14465;old_locus_tag=YPIP275_0597 NZ_AAOS02000014.1 Protein Homology CDS 131472 132011 . - 0 ID=cds-WP_002210925.1;Parent=gene-YPIP275_RS14465;Dbxref=GenBank:WP_002210925.1;Name=WP_002210925.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210925.1;locus_tag=YPIP275_RS14465;product=glycine zipper 2TM domain-containing protein;protein_id=WP_002210925.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 132116 133138 . + . ID=gene-YPIP275_RS14470;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14470;old_locus_tag=YPIP275_0598 NZ_AAOS02000014.1 Protein Homology CDS 132116 133138 . + 0 ID=cds-WP_000255944.1-21;Parent=gene-YPIP275_RS14470;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS14470;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 133135 133917 . + . ID=gene-YPIP275_RS14475;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS14475;old_locus_tag=YPIP275_0599 NZ_AAOS02000014.1 Protein Homology CDS 133135 133917 . + 0 ID=cds-WP_001317493.1-25;Parent=gene-YPIP275_RS14475;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS14475;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 134301 135509 . - . ID=gene-YPIP275_RS14480;Name=YPIP275_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14480;old_locus_tag=YPIP275_0600 NZ_AAOS02000014.1 Protein Homology CDS 134301 135509 . - 0 ID=cds-WP_002209743.1-15;Parent=gene-YPIP275_RS14480;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS14480;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 135605 139270 . - . ID=gene-YPIP275_RS14485;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=YPIP275_RS14485;old_locus_tag=YPIP275_0601 NZ_AAOS02000014.1 Protein Homology CDS 135605 139270 . - 0 ID=cds-WP_002210926.1;Parent=gene-YPIP275_RS14485;Dbxref=GenBank:WP_002210926.1;Name=WP_002210926.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210926.1;locus_tag=YPIP275_RS14485;product=ribonuclease E;protein_id=WP_002210926.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 139845 140807 . + . ID=gene-YPIP275_RS14490;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=YPIP275_RS14490;old_locus_tag=YPIP275_0602 NZ_AAOS02000014.1 Protein Homology CDS 139845 140807 . + 0 ID=cds-WP_002210927.1;Parent=gene-YPIP275_RS14490;Dbxref=GenBank:WP_002210927.1;Name=WP_002210927.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192608.1;locus_tag=YPIP275_RS14490;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_002210927.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 141027 141485 . + . ID=gene-YPIP275_RS14500;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS14500;old_locus_tag=YPIP275_0603 NZ_AAOS02000014.1 Protein Homology CDS 141027 141485 . + 0 ID=cds-WP_002213759.1-19;Parent=gene-YPIP275_RS14500;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS14500;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 141640 142236 . - . ID=gene-YPIP275_RS14505;Name=YPIP275_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14505;old_locus_tag=YPIP275_0604 NZ_AAOS02000014.1 Protein Homology CDS 141640 142236 . - 0 ID=cds-WP_002210928.1;Parent=gene-YPIP275_RS14505;Dbxref=GenBank:WP_002210928.1;Name=WP_002210928.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210928.1;locus_tag=YPIP275_RS14505;product=Maf family protein;protein_id=WP_002210928.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 142378 142902 . + . ID=gene-YPIP275_RS14510;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=YPIP275_RS14510;old_locus_tag=YPIP275_0606 NZ_AAOS02000014.1 Protein Homology CDS 142378 142902 . + 0 ID=cds-WP_002210930.1;Parent=gene-YPIP275_RS14510;Dbxref=GenBank:WP_002210930.1;Name=WP_002210930.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005273034.1;locus_tag=YPIP275_RS14510;product=23S rRNA accumulation protein YceD;protein_id=WP_002210930.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 142915 143082 . + . ID=gene-YPIP275_RS14515;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=YPIP275_RS14515;old_locus_tag=YPIP275_0607 NZ_AAOS02000014.1 Protein Homology CDS 142915 143082 . + 0 ID=cds-WP_002210931.1;Parent=gene-YPIP275_RS14515;Dbxref=GenBank:WP_002210931.1;Name=WP_002210931.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013576249.1;locus_tag=YPIP275_RS14515;product=50S ribosomal protein L32;protein_id=WP_002210931.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 143116 144150 . + . ID=gene-YPIP275_RS14520;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=YPIP275_RS14520;old_locus_tag=YPIP275_0608 NZ_AAOS02000014.1 Protein Homology CDS 143116 144150 . + 0 ID=cds-WP_002210932.1;Parent=gene-YPIP275_RS14520;Dbxref=GenBank:WP_002210932.1;Name=WP_002210932.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210932.1;locus_tag=YPIP275_RS14520;product=phosphate acyltransferase PlsX;protein_id=WP_002210932.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 144157 145107 . + . ID=gene-YPIP275_RS14525;Name=YPIP275_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS14525;old_locus_tag=YPIP275_0609 NZ_AAOS02000014.1 Protein Homology CDS 144157 145107 . + 0 ID=cds-WP_002210933.1;Parent=gene-YPIP275_RS14525;Dbxref=GenBank:WP_002210933.1;Name=WP_002210933.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210933.1;locus_tag=YPIP275_RS14525;product=beta-ketoacyl-ACP synthase III;protein_id=WP_002210933.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 145145 146074 . + . ID=gene-YPIP275_RS14530;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=YPIP275_RS14530;old_locus_tag=YPIP275_0610 NZ_AAOS02000014.1 Protein Homology CDS 145145 146074 . + 0 ID=cds-WP_002210934.1;Parent=gene-YPIP275_RS14530;Dbxref=GenBank:WP_002210934.1;Name=WP_002210934.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104963.1;locus_tag=YPIP275_RS14530;product=ACP S-malonyltransferase;protein_id=WP_002210934.1;transl_table=11 NZ_AAOS02000014.1 RefSeq gene 146088 146822 . + . ID=gene-YPIP275_RS14535;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=YPIP275_RS14535;old_locus_tag=YPIP275_0611 NZ_AAOS02000014.1 Protein Homology CDS 146088 146822 . + 0 ID=cds-WP_002210935.1;Parent=gene-YPIP275_RS14535;Dbxref=GenBank:WP_002210935.1;Name=WP_002210935.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=YPIP275_RS14535;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_002210935.1;transl_table=11 ##sequence-region NZ_AAOS02000013.1 1 152884 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000013.1 RefSeq region 1 152884 . + . ID=NZ_AAOS02000013.1:1..152884;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000013.1 RefSeq gene 1 735 . + . ID=gene-YPIP275_RS13105;Name=YPIP275_RS13105;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPIP275_RS13105;partial=true;start_range=.,1 NZ_AAOS02000013.1 cmsearch rRNA 1 735 . + . ID=rna-YPIP275_RS13105;Parent=gene-YPIP275_RS13105;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS13105;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_AAOS02000013.1 cmsearch exon 1 735 . + . ID=exon-YPIP275_RS13105-1;Parent=rna-YPIP275_RS13105;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS13105;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_AAOS02000013.1 RefSeq gene 845 960 . + . ID=gene-YPIP275_RS13110;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=YPIP275_RS13110;old_locus_tag=YPIP275_1086 NZ_AAOS02000013.1 cmsearch rRNA 845 960 . + . ID=rna-YPIP275_RS13110;Parent=gene-YPIP275_RS13110;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS13110;product=5S ribosomal RNA NZ_AAOS02000013.1 cmsearch exon 845 960 . + . ID=exon-YPIP275_RS13110-1;Parent=rna-YPIP275_RS13110;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS13110;product=5S ribosomal RNA NZ_AAOS02000013.1 RefSeq gene 1086 1162 . + . ID=gene-YPIP275_RS13115;Name=YPIP275_RS13115;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS13115;old_locus_tag=YPIP275_1087 NZ_AAOS02000013.1 tRNAscan-SE tRNA 1086 1162 . + . ID=rna-YPIP275_RS13115;Parent=gene-YPIP275_RS13115;anticodon=(pos:1120..1122);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS13115;product=tRNA-Asp NZ_AAOS02000013.1 tRNAscan-SE exon 1086 1162 . + . ID=exon-YPIP275_RS13115-1;Parent=rna-YPIP275_RS13115;anticodon=(pos:1120..1122);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS13115;product=tRNA-Asp NZ_AAOS02000013.1 RefSeq gene 1521 2324 . + . ID=gene-YPIP275_RS13120;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13120;old_locus_tag=YPIP275_1088 NZ_AAOS02000013.1 Protein Homology CDS 1521 2324 . + 0 ID=cds-WP_002210693.1;Parent=gene-YPIP275_RS13120;Dbxref=GenBank:WP_002210693.1;Name=WP_002210693.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414743.1;locus_tag=YPIP275_RS13120;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_002210693.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 2606 2782 . + . ID=gene-YPIP275_RS28745;Name=YPIP275_RS28745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28745 NZ_AAOS02000013.1 Protein Homology CDS 2606 2782 . + 0 ID=cds-WP_230517829.1;Parent=gene-YPIP275_RS28745;Dbxref=GenBank:WP_230517829.1;Name=WP_230517829.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019984.7;locus_tag=YPIP275_RS28745;product=hypothetical protein;protein_id=WP_230517829.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 3184 3966 . + . ID=gene-YPIP275_RS13130;Name=YPIP275_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13130;old_locus_tag=YPIP275_1090 NZ_AAOS02000013.1 Protein Homology CDS 3184 3966 . + 0 ID=cds-WP_002220059.1;Parent=gene-YPIP275_RS13130;Dbxref=GenBank:WP_002220059.1;Name=WP_002220059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166582.1;locus_tag=YPIP275_RS13130;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_002220059.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 4008 5396 . - . ID=gene-YPIP275_RS13135;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=YPIP275_RS13135;old_locus_tag=YPIP275_1091 NZ_AAOS02000013.1 Protein Homology CDS 4008 5396 . - 0 ID=cds-WP_002228041.1;Parent=gene-YPIP275_RS13135;Dbxref=GenBank:WP_002228041.1;Name=WP_002228041.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217338.1;locus_tag=YPIP275_RS13135;product=murein transglycosylase D;protein_id=WP_002228041.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 5468 6223 . - . ID=gene-YPIP275_RS13140;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13140;old_locus_tag=YPIP275_1092 NZ_AAOS02000013.1 Protein Homology CDS 5468 6223 . - 0 ID=cds-WP_002210697.1;Parent=gene-YPIP275_RS13140;Dbxref=GenBank:WP_002210697.1;Name=WP_002210697.1;Ontology_term=GO:0051596,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210697.1;locus_tag=YPIP275_RS13140;product=hydroxyacylglutathione hydrolase;protein_id=WP_002210697.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 6268 6987 . + . ID=gene-YPIP275_RS13145;Name=YPIP275_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13145;old_locus_tag=YPIP275_1093 NZ_AAOS02000013.1 Protein Homology CDS 6268 6987 . + 0 ID=cds-WP_002210698.1;Parent=gene-YPIP275_RS13145;Dbxref=GenBank:WP_002210698.1;Name=WP_002210698.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390358.1;locus_tag=YPIP275_RS13145;product=class I SAM-dependent methyltransferase;protein_id=WP_002210698.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 7042 7506 . - . ID=gene-YPIP275_RS13150;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13150;old_locus_tag=YPIP275_1094 NZ_AAOS02000013.1 Protein Homology CDS 7042 7506 . - 0 ID=cds-WP_002210699.1;Parent=gene-YPIP275_RS13150;Dbxref=GenBank:WP_002210699.1;Name=WP_002210699.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002387923.1;locus_tag=YPIP275_RS13150;product=ribonuclease HI;protein_id=WP_002210699.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 7576 8340 . + . ID=gene-YPIP275_RS13155;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS13155;old_locus_tag=YPIP275_1095 NZ_AAOS02000013.1 Protein Homology CDS 7576 8340 . + 0 ID=cds-WP_002210700.1;Parent=gene-YPIP275_RS13155;Dbxref=GenBank:WP_002210700.1;Name=WP_002210700.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210700.1;locus_tag=YPIP275_RS13155;product=DNA polymerase III subunit epsilon;protein_id=WP_002210700.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 8453 8529 . + . ID=gene-YPIP275_RS13160;Name=YPIP275_RS13160;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS13160;old_locus_tag=YPIP275_1096 NZ_AAOS02000013.1 tRNAscan-SE tRNA 8453 8529 . + . ID=rna-YPIP275_RS13160;Parent=gene-YPIP275_RS13160;anticodon=(pos:8487..8489);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS13160;product=tRNA-Asp NZ_AAOS02000013.1 tRNAscan-SE exon 8453 8529 . + . ID=exon-YPIP275_RS13160-1;Parent=rna-YPIP275_RS13160;anticodon=(pos:8487..8489);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS13160;product=tRNA-Asp NZ_AAOS02000013.1 RefSeq gene 8586 10070 . - . ID=gene-YPIP275_RS13165;Name=YPIP275_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13165;old_locus_tag=YPIP275_1097 NZ_AAOS02000013.1 Protein Homology CDS 8586 10070 . - 0 ID=cds-WP_002210701.1;Parent=gene-YPIP275_RS13165;Dbxref=GenBank:WP_002210701.1;Name=WP_002210701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303765.1;locus_tag=YPIP275_RS13165;product=NCS1 family nucleobase:cation symporter-1;protein_id=WP_002210701.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 10294 10416 . + . ID=gene-YPIP275_RS13170;Name=YPIP275_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13170;old_locus_tag=YPIP275_1098 NZ_AAOS02000013.1 Protein Homology CDS 10294 10416 . + 0 ID=cds-WP_002210702.1;Parent=gene-YPIP275_RS13170;Dbxref=GenBank:WP_002210702.1;Name=WP_002210702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256648.1;locus_tag=YPIP275_RS13170;product=hypothetical protein;protein_id=WP_002210702.1;transl_table=11 NZ_AAOS02000013.1 RefSeq pseudogene 10409 10627 . + . ID=gene-YPIP275_RS13175;Name=YPIP275_RS13175;end_range=10627,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS13175;old_locus_tag=YPIP275_1099;partial=true;pseudo=true NZ_AAOS02000013.1 Protein Homology CDS 10409 10627 . + 0 ID=cds-YPIP275_RS13175;Parent=gene-YPIP275_RS13175;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=10627,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192850.1;locus_tag=YPIP275_RS13175;partial=true;product=allantoinase;pseudo=true;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 10693 11475 . - . ID=gene-YPIP275_RS13180;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13180;old_locus_tag=YPIP275_1100 NZ_AAOS02000013.1 Protein Homology CDS 10693 11475 . - 0 ID=cds-WP_001317493.1-26;Parent=gene-YPIP275_RS13180;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS13180;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 11472 12494 . - . ID=gene-YPIP275_RS13185;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13185;old_locus_tag=YPIP275_1101 NZ_AAOS02000013.1 Protein Homology CDS 11472 12494 . - 0 ID=cds-WP_000255944.1-22;Parent=gene-YPIP275_RS13185;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS13185;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000013.1 RefSeq pseudogene 12568 12684 . - . ID=gene-YPIP275_RS13190;Name=YPIP275_RS13190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS13190;old_locus_tag=YPIP275_1102;partial=true;pseudo=true;start_range=.,12568 NZ_AAOS02000013.1 Protein Homology CDS 12568 12684 . - 0 ID=cds-YPIP275_RS13190;Parent=gene-YPIP275_RS13190;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210713.1;locus_tag=YPIP275_RS13190;partial=true;product=integrase arm-type DNA-binding domain-containing protein;pseudo=true;start_range=.,12568;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 13099 13416 . + . ID=gene-YPIP275_RS13195;Name=YPIP275_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13195 NZ_AAOS02000013.1 Protein Homology CDS 13099 13416 . + 0 ID=cds-WP_002215951.1;Parent=gene-YPIP275_RS13195;Dbxref=GenBank:WP_002215951.1;Name=WP_002215951.1;Ontology_term=GO:0008219,GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215951.1;locus_tag=YPIP275_RS13195;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_002215951.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 13422 13736 . + . ID=gene-YPIP275_RS13200;Name=YPIP275_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13200;old_locus_tag=YPIP275_1103 NZ_AAOS02000013.1 Protein Homology CDS 13422 13736 . + 0 ID=cds-WP_002210705.1;Parent=gene-YPIP275_RS13200;Dbxref=GenBank:WP_002210705.1;Name=WP_002210705.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210705.1;locus_tag=YPIP275_RS13200;product=addiction module antidote protein;protein_id=WP_002210705.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 14085 15173 . - . ID=gene-YPIP275_RS13205;Name=YPIP275_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13205;old_locus_tag=YPIP275_1105 NZ_AAOS02000013.1 Protein Homology CDS 14085 15173 . - 0 ID=cds-WP_002210707.1;Parent=gene-YPIP275_RS13205;Dbxref=GenBank:WP_002210707.1;Name=WP_002210707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674110.1;locus_tag=YPIP275_RS13205;product=helicase RepA family protein;protein_id=WP_002210707.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 15170 16129 . - . ID=gene-YPIP275_RS13210;Name=YPIP275_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13210;old_locus_tag=YPIP275_1106 NZ_AAOS02000013.1 Protein Homology CDS 15170 16129 . - 0 ID=cds-WP_002215950.1;Parent=gene-YPIP275_RS13210;Dbxref=GenBank:WP_002215950.1;Name=WP_002215950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906363.1;locus_tag=YPIP275_RS13210;product=toprim domain-containing protein;protein_id=WP_002215950.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 16122 16664 . - . ID=gene-YPIP275_RS13215;Name=YPIP275_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13215 NZ_AAOS02000013.1 Protein Homology CDS 16122 16664 . - 0 ID=cds-WP_002215949.1;Parent=gene-YPIP275_RS13215;Dbxref=GenBank:WP_002215949.1;Name=WP_002215949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082168.1;locus_tag=YPIP275_RS13215;product=ash family protein;protein_id=WP_002215949.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 16664 16864 . - . ID=gene-YPIP275_RS13220;Name=YPIP275_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13220;old_locus_tag=YPIP275_1108 NZ_AAOS02000013.1 Protein Homology CDS 16664 16864 . - 0 ID=cds-WP_002210709.1;Parent=gene-YPIP275_RS13220;Dbxref=GenBank:WP_002210709.1;Name=WP_002210709.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210709.1;locus_tag=YPIP275_RS13220;product=AlpA family transcriptional regulator;protein_id=WP_002210709.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 16857 17744 . - . ID=gene-YPIP275_RS13225;Name=YPIP275_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13225;old_locus_tag=YPIP275_1109 NZ_AAOS02000013.1 Protein Homology CDS 16857 17744 . - 0 ID=cds-WP_002210710.1;Parent=gene-YPIP275_RS13225;Dbxref=GenBank:WP_002210710.1;Name=WP_002210710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210710.1;locus_tag=YPIP275_RS13225;product=integrase domain-containing protein;protein_id=WP_002210710.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 17766 18089 . - . ID=gene-YPIP275_RS13230;Name=YPIP275_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13230 NZ_AAOS02000013.1 Protein Homology CDS 17766 18089 . - 0 ID=cds-WP_011566205.1;Parent=gene-YPIP275_RS13230;Dbxref=GenBank:WP_011566205.1;Name=WP_011566205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011566205.1;locus_tag=YPIP275_RS13230;product=hypothetical protein;protein_id=WP_011566205.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 18552 18779 . + . ID=gene-YPIP275_RS13240;Name=YPIP275_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13240 NZ_AAOS02000013.1 Protein Homology CDS 18552 18779 . + 0 ID=cds-WP_002215946.1;Parent=gene-YPIP275_RS13240;Dbxref=GenBank:WP_002215946.1;Name=WP_002215946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215946.1;locus_tag=YPIP275_RS13240;product=hypothetical protein;protein_id=WP_002215946.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 18941 20611 . - . ID=gene-YPIP275_RS13245;Name=YPIP275_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13245;old_locus_tag=YPIP275_1111 NZ_AAOS02000013.1 Protein Homology CDS 18941 20611 . - 0 ID=cds-WP_002215945.1;Parent=gene-YPIP275_RS13245;Dbxref=GenBank:WP_002215945.1;Name=WP_002215945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215945.1;locus_tag=YPIP275_RS13245;product=hypothetical protein;protein_id=WP_002215945.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 20662 21750 . - . ID=gene-YPIP275_RS13250;Name=YPIP275_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13250;old_locus_tag=YPIP275_1112 NZ_AAOS02000013.1 Protein Homology CDS 20662 21750 . - 0 ID=cds-WP_002210712.1;Parent=gene-YPIP275_RS13250;Dbxref=GenBank:WP_002210712.1;Name=WP_002210712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083798.1;locus_tag=YPIP275_RS13250;product=DUF4297 domain-containing protein;protein_id=WP_002210712.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 21829 23028 . - . ID=gene-YPIP275_RS13255;Name=YPIP275_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13255;old_locus_tag=YPIP275_1113 NZ_AAOS02000013.1 Protein Homology CDS 21829 23028 . - 0 ID=cds-WP_002210713.1;Parent=gene-YPIP275_RS13255;Dbxref=GenBank:WP_002210713.1;Name=WP_002210713.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210713.1;locus_tag=YPIP275_RS13255;product=integrase domain-containing protein;protein_id=WP_002210713.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 23252 23710 . - . ID=gene-YPIP275_RS13260;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13260;old_locus_tag=YPIP275_1114 NZ_AAOS02000013.1 Protein Homology CDS 23252 23710 . - 0 ID=cds-WP_002213759.1-20;Parent=gene-YPIP275_RS13260;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS13260;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 23933 24296 . - . ID=gene-YPIP275_RS27430;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=YPIP275_RS27430 NZ_AAOS02000013.1 cmsearch tmRNA 23933 24296 . - . ID=rna-YPIP275_RS27430;Parent=gene-YPIP275_RS27430;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS27430;product=transfer-messenger RNA NZ_AAOS02000013.1 cmsearch exon 23933 24296 . - . ID=exon-YPIP275_RS27430-1;Parent=rna-YPIP275_RS27430;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS27430;product=transfer-messenger RNA NZ_AAOS02000013.1 RefSeq gene 24345 24827 . - . ID=gene-YPIP275_RS13270;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13270;old_locus_tag=YPIP275_1115 NZ_AAOS02000013.1 Protein Homology CDS 24345 24827 . - 0 ID=cds-WP_002210714.1;Parent=gene-YPIP275_RS13270;Dbxref=GenBank:WP_002210714.1;Name=WP_002210714.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311509.1;locus_tag=YPIP275_RS13270;product=SsrA-binding protein SmpB;protein_id=WP_002210714.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 24988 25422 . + . ID=gene-YPIP275_RS13275;Name=YPIP275_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13275;old_locus_tag=YPIP275_1116 NZ_AAOS02000013.1 Protein Homology CDS 24988 25422 . + 0 ID=cds-WP_002210715.1;Parent=gene-YPIP275_RS13275;Dbxref=GenBank:WP_002210715.1;Name=WP_002210715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105494.1;locus_tag=YPIP275_RS13275;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_002210715.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 25415 25699 . + . ID=gene-YPIP275_RS13280;Name=YPIP275_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13280;old_locus_tag=YPIP275_1117 NZ_AAOS02000013.1 Protein Homology CDS 25415 25699 . + 0 ID=cds-WP_002210716.1;Parent=gene-YPIP275_RS13280;Dbxref=GenBank:WP_002210716.1;Name=WP_002210716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146394.1;locus_tag=YPIP275_RS13280;product=RnfH family protein;protein_id=WP_002210716.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 25849 26190 . - . ID=gene-YPIP275_RS13285;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=YPIP275_RS13285;old_locus_tag=YPIP275_1118 NZ_AAOS02000013.1 Protein Homology CDS 25849 26190 . - 0 ID=cds-WP_002210717.1;Parent=gene-YPIP275_RS13285;Dbxref=GenBank:WP_002210717.1;Name=WP_002210717.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210717.1;locus_tag=YPIP275_RS13285;product=outer membrane protein assembly factor BamE;protein_id=WP_002210717.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 26304 27965 . - . ID=gene-YPIP275_RS13290;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=YPIP275_RS13290;old_locus_tag=YPIP275_1119 NZ_AAOS02000013.1 Protein Homology CDS 26304 27965 . - 0 ID=cds-WP_002210718.1;Parent=gene-YPIP275_RS13290;Dbxref=GenBank:WP_002210718.1;Name=WP_002210718.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683564.1;locus_tag=YPIP275_RS13290;product=DNA repair protein RecN;protein_id=WP_002210718.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 28052 28933 . - . ID=gene-YPIP275_RS13295;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=YPIP275_RS13295;old_locus_tag=YPIP275_1120 NZ_AAOS02000013.1 Protein Homology CDS 28052 28933 . - 0 ID=cds-WP_002210719.1;Parent=gene-YPIP275_RS13295;Dbxref=GenBank:WP_002210719.1;Name=WP_002210719.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081868.1;locus_tag=YPIP275_RS13295;product=NAD(+) kinase;protein_id=WP_002210719.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 29057 29635 . + . ID=gene-YPIP275_RS13300;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=YPIP275_RS13300;old_locus_tag=YPIP275_1121 NZ_AAOS02000013.1 Protein Homology CDS 29057 29635 . + 0 ID=cds-WP_002210720.1;Parent=gene-YPIP275_RS13300;Dbxref=GenBank:WP_002210720.1;Name=WP_002210720.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713984.1;locus_tag=YPIP275_RS13300;product=nucleotide exchange factor GrpE;protein_id=WP_002210720.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 29743 31023 . - . ID=gene-YPIP275_RS13305;Name=YPIP275_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13305;old_locus_tag=YPIP275_1122 NZ_AAOS02000013.1 Protein Homology CDS 29743 31023 . - 0 ID=cds-WP_002210721.1;Parent=gene-YPIP275_RS13305;Dbxref=GenBank:WP_002210721.1;Name=WP_002210721.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165473.1;locus_tag=YPIP275_RS13305;product=citrate synthase;protein_id=WP_002210721.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 31733 32122 . + . ID=gene-YPIP275_RS13310;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=YPIP275_RS13310;old_locus_tag=YPIP275_1123 NZ_AAOS02000013.1 Protein Homology CDS 31733 32122 . + 0 ID=cds-WP_002210722.1;Parent=gene-YPIP275_RS13310;Dbxref=GenBank:WP_002210722.1;Name=WP_002210722.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210722.1;locus_tag=YPIP275_RS13310;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_002210722.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 32116 32463 . + . ID=gene-YPIP275_RS13315;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=YPIP275_RS13315;old_locus_tag=YPIP275_1124 NZ_AAOS02000013.1 Protein Homology CDS 32116 32463 . + 0 ID=cds-WP_002210723.1;Parent=gene-YPIP275_RS13315;Dbxref=GenBank:WP_002210723.1;Name=WP_002210723.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082678.1;locus_tag=YPIP275_RS13315;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_002210723.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 32464 34230 . + . ID=gene-YPIP275_RS13320;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13320;old_locus_tag=YPIP275_1125 NZ_AAOS02000013.1 Protein Homology CDS 32464 34230 . + 0 ID=cds-WP_002210724.1;Parent=gene-YPIP275_RS13320;Dbxref=GenBank:WP_002210724.1;Name=WP_002210724.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308775.1;locus_tag=YPIP275_RS13320;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_002210724.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 34280 34996 . + . ID=gene-YPIP275_RS13325;Name=YPIP275_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13325;old_locus_tag=YPIP275_1126 NZ_AAOS02000013.1 Protein Homology CDS 34280 34996 . + 0 ID=cds-WP_002210725.1;Parent=gene-YPIP275_RS13325;Dbxref=GenBank:WP_002210725.1;Name=WP_002210725.1;Ontology_term=GO:0008177,GO:0046872;gbkey=CDS;go_function=succinate dehydrogenase (quinone) activity|0008177||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=YPIP275_RS13325;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_002210725.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 35352 38159 . + . ID=gene-YPIP275_RS13330;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13330;old_locus_tag=YPIP275_1127 NZ_AAOS02000013.1 Protein Homology CDS 35352 38159 . + 0 ID=cds-WP_002210726.1;Parent=gene-YPIP275_RS13330;Dbxref=GenBank:WP_002210726.1;Name=WP_002210726.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210726.1;locus_tag=YPIP275_RS13330;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_002210726.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 38189 39412 . + . ID=gene-YPIP275_RS13335;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13335;old_locus_tag=YPIP275_1128 NZ_AAOS02000013.1 Protein Homology CDS 38189 39412 . + 0 ID=cds-WP_002210727.1;Parent=gene-YPIP275_RS13335;Dbxref=GenBank:WP_002210727.1;Name=WP_002210727.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308779.1;locus_tag=YPIP275_RS13335;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_002210727.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 39525 40691 . + . ID=gene-YPIP275_RS13340;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=YPIP275_RS13340;old_locus_tag=YPIP275_1129 NZ_AAOS02000013.1 Protein Homology CDS 39525 40691 . + 0 ID=cds-WP_002210728.1;Parent=gene-YPIP275_RS13340;Dbxref=GenBank:WP_002210728.1;Name=WP_002210728.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=YPIP275_RS13340;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_002210728.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 40691 41563 . + . ID=gene-YPIP275_RS13345;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=YPIP275_RS13345;old_locus_tag=YPIP275_1130 NZ_AAOS02000013.1 Protein Homology CDS 40691 41563 . + 0 ID=cds-WP_002210729.1;Parent=gene-YPIP275_RS13345;Dbxref=GenBank:WP_002210729.1;Name=WP_002210729.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210729.1;locus_tag=YPIP275_RS13345;product=succinate--CoA ligase subunit alpha;protein_id=WP_002210729.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 42330 43898 . + . ID=gene-YPIP275_RS13350;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13350;old_locus_tag=YPIP275_1131 NZ_AAOS02000013.1 Protein Homology CDS 42330 43898 . + 0 ID=cds-WP_002210730.1;Parent=gene-YPIP275_RS13350;Dbxref=GenBank:WP_002210730.1;Name=WP_002210730.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415261.2;locus_tag=YPIP275_RS13350;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_002210730.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 43913 45052 . + . ID=gene-YPIP275_RS13355;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13355;old_locus_tag=YPIP275_1132 NZ_AAOS02000013.1 Protein Homology CDS 43913 45052 . + 0 ID=cds-WP_002210731.1;Parent=gene-YPIP275_RS13355;Dbxref=GenBank:WP_002210731.1;Name=WP_002210731.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393310.1;locus_tag=YPIP275_RS13355;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_002210731.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 45065 45199 . + . ID=gene-YPIP275_RS13360;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;gene_synonym=ybgT;locus_tag=YPIP275_RS13360;old_locus_tag=YPIP275_1133 NZ_AAOS02000013.1 Protein Homology CDS 45065 45199 . + 0 ID=cds-WP_002210732.1;Parent=gene-YPIP275_RS13360;Dbxref=GenBank:WP_002210732.1;Name=WP_002210732.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210732.1;locus_tag=YPIP275_RS13360;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_002210732.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 45189 45476 . + . ID=gene-YPIP275_RS13365;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=YPIP275_RS13365;old_locus_tag=YPIP275_1134 NZ_AAOS02000013.1 Protein Homology CDS 45189 45476 . + 0 ID=cds-WP_011191945.1;Parent=gene-YPIP275_RS13365;Dbxref=GenBank:WP_011191945.1;Name=WP_011191945.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191945.1;locus_tag=YPIP275_RS13365;product=cyd operon protein YbgE;protein_id=WP_011191945.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 45608 46009 . + . ID=gene-YPIP275_RS13370;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=YPIP275_RS13370;old_locus_tag=YPIP275_1135 NZ_AAOS02000013.1 Protein Homology CDS 45608 46009 . + 0 ID=cds-WP_002210734.1;Parent=gene-YPIP275_RS13370;Dbxref=GenBank:WP_002210734.1;Name=WP_002210734.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165498.1;locus_tag=YPIP275_RS13370;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_002210734.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 46009 46695 . + . ID=gene-YPIP275_RS13375;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS13375;old_locus_tag=YPIP275_1136 NZ_AAOS02000013.1 Protein Homology CDS 46009 46695 . + 0 ID=cds-WP_002210735.1;Parent=gene-YPIP275_RS13375;Dbxref=GenBank:WP_002210735.1;Name=WP_002210735.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210735.1;locus_tag=YPIP275_RS13375;product=Tol-Pal system protein TolQ;protein_id=WP_002210735.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 46708 47136 . + . ID=gene-YPIP275_RS13380;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=YPIP275_RS13380;old_locus_tag=YPIP275_1137 NZ_AAOS02000013.1 Protein Homology CDS 46708 47136 . + 0 ID=cds-WP_002210736.1;Parent=gene-YPIP275_RS13380;Dbxref=GenBank:WP_002210736.1;Name=WP_002210736.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013357153.1;locus_tag=YPIP275_RS13380;product=colicin uptake protein TolR;protein_id=WP_002210736.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 47248 48414 . + . ID=gene-YPIP275_RS13385;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13385;old_locus_tag=YPIP275_1138 NZ_AAOS02000013.1 Protein Homology CDS 47248 48414 . + 0 ID=cds-WP_002210737.1;Parent=gene-YPIP275_RS13385;Dbxref=GenBank:WP_002210737.1;Name=WP_002210737.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210737.1;locus_tag=YPIP275_RS13385;product=cell envelope integrity protein TolA;protein_id=WP_002210737.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 48534 49826 . + . ID=gene-YPIP275_RS13390;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13390;old_locus_tag=YPIP275_1139 NZ_AAOS02000013.1 Protein Homology CDS 48534 49826 . + 0 ID=cds-WP_002210738.1;Parent=gene-YPIP275_RS13390;Dbxref=GenBank:WP_002210738.1;Name=WP_002210738.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=YPIP275_RS13390;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_002210738.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 49877 50383 . + . ID=gene-YPIP275_RS13395;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=YPIP275_RS13395;old_locus_tag=YPIP275_1140 NZ_AAOS02000013.1 Protein Homology CDS 49877 50383 . + 0 ID=cds-WP_002210739.1;Parent=gene-YPIP275_RS13395;Dbxref=GenBank:WP_002210739.1;Name=WP_002210739.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210739.1;locus_tag=YPIP275_RS13395;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_002210739.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 50393 51202 . + . ID=gene-YPIP275_RS13400;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13400;old_locus_tag=YPIP275_1141 NZ_AAOS02000013.1 Protein Homology CDS 50393 51202 . + 0 ID=cds-WP_002210740.1;Parent=gene-YPIP275_RS13400;Dbxref=GenBank:WP_002210740.1;Name=WP_002210740.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210740.1;locus_tag=YPIP275_RS13400;product=cell division protein CpoB;protein_id=WP_002210740.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 51393 51468 . + . ID=gene-YPIP275_RS13405;Name=YPIP275_RS13405;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS13405;old_locus_tag=YPIP275_1142 NZ_AAOS02000013.1 tRNAscan-SE tRNA 51393 51468 . + . ID=rna-YPIP275_RS13405;Parent=gene-YPIP275_RS13405;anticodon=(pos:51426..51428);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS13405;product=tRNA-Lys NZ_AAOS02000013.1 tRNAscan-SE exon 51393 51468 . + . ID=exon-YPIP275_RS13405-1;Parent=rna-YPIP275_RS13405;anticodon=(pos:51426..51428);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS13405;product=tRNA-Lys NZ_AAOS02000013.1 RefSeq gene 51496 51571 . + . ID=gene-YPIP275_RS13410;Name=YPIP275_RS13410;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS13410;old_locus_tag=YPIP275_1143 NZ_AAOS02000013.1 tRNAscan-SE tRNA 51496 51571 . + . ID=rna-YPIP275_RS13410;Parent=gene-YPIP275_RS13410;anticodon=(pos:51529..51531);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS13410;product=tRNA-Lys NZ_AAOS02000013.1 tRNAscan-SE exon 51496 51571 . + . ID=exon-YPIP275_RS13410-1;Parent=rna-YPIP275_RS13410;anticodon=(pos:51529..51531);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS13410;product=tRNA-Lys NZ_AAOS02000013.1 RefSeq gene 51609 51738 . + . ID=gene-YPIP275_RS28750;Name=YPIP275_RS28750;gbkey=Gene;gene_biotype=ncRNA;locus_tag=YPIP275_RS28750 NZ_AAOS02000013.1 cmsearch ncRNA 51609 51738 . + . ID=rna-YPIP275_RS28750;Parent=gene-YPIP275_RS28750;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS28750;product=RtT sRNA NZ_AAOS02000013.1 cmsearch exon 51609 51738 . + . ID=exon-YPIP275_RS28750-1;Parent=rna-YPIP275_RS28750;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS28750;product=RtT sRNA NZ_AAOS02000013.1 RefSeq gene 52038 53099 . + . ID=gene-YPIP275_RS13425;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13425;old_locus_tag=YPIP275_1145 NZ_AAOS02000013.1 Protein Homology CDS 52038 53099 . + 0 ID=cds-WP_002210741.1;Parent=gene-YPIP275_RS13425;Dbxref=GenBank:WP_002210741.1;Name=WP_002210741.1;Ontology_term=GO:0019363,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454028.1;locus_tag=YPIP275_RS13425;product=quinolinate synthase NadA;protein_id=WP_002210741.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 53221 53946 . + . ID=gene-YPIP275_RS13430;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=YPIP275_RS13430;old_locus_tag=YPIP275_1146 NZ_AAOS02000013.1 Protein Homology CDS 53221 53946 . + 0 ID=cds-WP_002210742.1;Parent=gene-YPIP275_RS13430;Dbxref=GenBank:WP_002210742.1;Name=WP_002210742.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210742.1;locus_tag=YPIP275_RS13430;product=nicotinamide riboside transporter PnuC;protein_id=WP_002210742.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 54061 54999 . - . ID=gene-YPIP275_RS13435;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13435;old_locus_tag=YPIP275_1147 NZ_AAOS02000013.1 Protein Homology CDS 54061 54999 . - 0 ID=cds-WP_002210743.1;Parent=gene-YPIP275_RS13435;Dbxref=GenBank:WP_002210743.1;Name=WP_002210743.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413566.1;locus_tag=YPIP275_RS13435;product=CDF family zinc transporter ZitB;protein_id=WP_002210743.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 55448 56464 . + . ID=gene-YPIP275_RS13440;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=YPIP275_RS13440;old_locus_tag=YPIP275_1148 NZ_AAOS02000013.1 Protein Homology CDS 55448 56464 . + 0 ID=cds-WP_002210744.1;Parent=gene-YPIP275_RS13440;Dbxref=GenBank:WP_002210744.1;Name=WP_002210744.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257951.1;locus_tag=YPIP275_RS13440;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_002210744.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 56474 57256 . - . ID=gene-YPIP275_RS13445;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13445;old_locus_tag=YPIP275_1149 NZ_AAOS02000013.1 Protein Homology CDS 56474 57256 . - 0 ID=cds-WP_001317493.1-27;Parent=gene-YPIP275_RS13445;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS13445;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 57253 58275 . - . ID=gene-YPIP275_RS13450;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13450;old_locus_tag=YPIP275_1150 NZ_AAOS02000013.1 Protein Homology CDS 57253 58275 . - 0 ID=cds-WP_000255944.1-23;Parent=gene-YPIP275_RS13450;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS13450;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000013.1 RefSeq pseudogene 58364 58459 . + . ID=gene-YPIP275_RS13455;Name=YPIP275_RS13455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS13455;old_locus_tag=YPIP275_1151;partial=true;pseudo=true;start_range=.,58364 NZ_AAOS02000013.1 Protein Homology CDS 58364 58459 . + 0 ID=cds-YPIP275_RS13455;Parent=gene-YPIP275_RS13455;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391570.1;locus_tag=YPIP275_RS13455;partial=true;product=3-deoxy-D-arabinoheptulosonate-7-phosphate synthase;pseudo=true;start_range=.,58364;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 58641 59393 . - . ID=gene-YPIP275_RS13460;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13460;old_locus_tag=YPIP275_1152 NZ_AAOS02000013.1 Protein Homology CDS 58641 59393 . - 0 ID=cds-WP_002210746.1;Parent=gene-YPIP275_RS13460;Dbxref=GenBank:WP_002210746.1;Name=WP_002210746.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=YPIP275_RS13460;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_002210746.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 59740 60075 . - . ID=gene-YPIP275_RS13465;Name=YPIP275_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13465;old_locus_tag=YPIP275_1153 NZ_AAOS02000013.1 Protein Homology CDS 59740 60075 . - 0 ID=cds-WP_002210747.1;Parent=gene-YPIP275_RS13465;Dbxref=GenBank:WP_002210747.1;Name=WP_002210747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210747.1;locus_tag=YPIP275_RS13465;product=PsiF family protein;protein_id=WP_002210747.1;transl_table=11 NZ_AAOS02000013.1 RefSeq pseudogene 60368 61437 . - . ID=gene-YPIP275_RS13470;Name=galM;gbkey=Gene;gene=galM;gene_biotype=pseudogene;locus_tag=YPIP275_RS13470;old_locus_tag=YPIP275_1154;pseudo=true NZ_AAOS02000013.1 Protein Homology CDS 60368 61437 . - 0 ID=cds-YPIP275_RS13470;Parent=gene-YPIP275_RS13470;Note=frameshifted;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191949.1;locus_tag=YPIP275_RS13470;product=galactose-1-epimerase;pseudo=true;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 61431 62582 . - . ID=gene-YPIP275_RS13480;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=YPIP275_RS13480;old_locus_tag=YPIP275_1156 NZ_AAOS02000013.1 Protein Homology CDS 61431 62582 . - 0 ID=cds-WP_002210748.1;Parent=gene-YPIP275_RS13480;Dbxref=GenBank:WP_002210748.1;Name=WP_002210748.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004877276.1;locus_tag=YPIP275_RS13480;product=galactokinase;protein_id=WP_002210748.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 62579 63631 . - . ID=gene-YPIP275_RS13485;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=YPIP275_RS13485;old_locus_tag=YPIP275_1157 NZ_AAOS02000013.1 Protein Homology CDS 62579 63631 . - 0 ID=cds-WP_002210749.1;Parent=gene-YPIP275_RS13485;Dbxref=GenBank:WP_002210749.1;Name=WP_002210749.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210749.1;locus_tag=YPIP275_RS13485;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_002210749.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 63641 64657 . - . ID=gene-YPIP275_RS13490;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=YPIP275_RS13490;old_locus_tag=YPIP275_1158 NZ_AAOS02000013.1 Protein Homology CDS 63641 64657 . - 0 ID=cds-WP_002210750.1;Parent=gene-YPIP275_RS13490;Dbxref=GenBank:WP_002210750.1;Name=WP_002210750.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004877274.1;locus_tag=YPIP275_RS13490;product=UDP-glucose 4-epimerase GalE;protein_id=WP_002210750.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 65017 65835 . - . ID=gene-YPIP275_RS13495;Name=YPIP275_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13495;old_locus_tag=YPIP275_1159 NZ_AAOS02000013.1 Protein Homology CDS 65017 65835 . - 0 ID=cds-WP_002210751.1;Parent=gene-YPIP275_RS13495;Dbxref=GenBank:WP_002210751.1;Name=WP_002210751.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210751.1;locus_tag=YPIP275_RS13495;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_002210751.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 66052 67542 . - . ID=gene-YPIP275_RS13505;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=YPIP275_RS13505;old_locus_tag=YPIP275_1161 NZ_AAOS02000013.1 Protein Homology CDS 66052 67542 . - 0 ID=cds-WP_002210753.1;Parent=gene-YPIP275_RS13505;Dbxref=GenBank:WP_002210753.1;Name=WP_002210753.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674014.1;locus_tag=YPIP275_RS13505;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_002210753.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 67652 68443 . - . ID=gene-YPIP275_RS13510;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=YPIP275_RS13510;old_locus_tag=YPIP275_1162 NZ_AAOS02000013.1 Protein Homology CDS 67652 68443 . - 0 ID=cds-WP_002210754.1;Parent=gene-YPIP275_RS13510;Dbxref=GenBank:WP_002210754.1;Name=WP_002210754.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649518.1;locus_tag=YPIP275_RS13510;product=molybdenum-dependent transcriptional regulator;protein_id=WP_002210754.1;transl_table=11 NZ_AAOS02000013.1 RefSeq pseudogene 68777 68878 . + . ID=gene-YPIP275_RS27445;Name=YPIP275_RS27445;end_range=68878,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS27445;old_locus_tag=YPIP275_1163;partial=true;pseudo=true NZ_AAOS02000013.1 Protein Homology CDS 68777 68878 . + 0 ID=cds-YPIP275_RS27445;Parent=gene-YPIP275_RS27445;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:1990961,GO:0042910,GO:0005886;end_range=68878,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225900.1;locus_tag=YPIP275_RS27445;partial=true;product=AcrZ family multidrug efflux pump-associated protein;pseudo=true;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 68915 70123 . - . ID=gene-YPIP275_RS13515;Name=YPIP275_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13515;old_locus_tag=YPIP275_1164 NZ_AAOS02000013.1 Protein Homology CDS 68915 70123 . - 0 ID=cds-WP_002209743.1-16;Parent=gene-YPIP275_RS13515;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS13515;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 70487 71266 . + . ID=gene-YPIP275_RS13520;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13520;old_locus_tag=YPIP275_1165 NZ_AAOS02000013.1 Protein Homology CDS 70487 71266 . + 0 ID=cds-WP_002210756.1;Parent=gene-YPIP275_RS13520;Dbxref=GenBank:WP_002210756.1;Name=WP_002210756.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210756.1;locus_tag=YPIP275_RS13520;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_002210756.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 71266 71961 . + . ID=gene-YPIP275_RS13525;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13525;old_locus_tag=YPIP275_1166 NZ_AAOS02000013.1 Protein Homology CDS 71266 71961 . + 0 ID=cds-WP_002210757.1;Parent=gene-YPIP275_RS13525;Dbxref=GenBank:WP_002210757.1;Name=WP_002210757.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229365.1;locus_tag=YPIP275_RS13525;product=molybdate ABC transporter permease subunit;protein_id=WP_002210757.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 71955 73034 . + . ID=gene-YPIP275_RS13530;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=YPIP275_RS13530;old_locus_tag=YPIP275_1167 NZ_AAOS02000013.1 Protein Homology CDS 71955 73034 . + 0 ID=cds-WP_002210758.1;Parent=gene-YPIP275_RS13530;Dbxref=GenBank:WP_002210758.1;Name=WP_002210758.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210758.1;locus_tag=YPIP275_RS13530;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_002210758.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 73090 73911 . - . ID=gene-YPIP275_RS13535;Name=YPIP275_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13535;old_locus_tag=YPIP275_1168 NZ_AAOS02000013.1 Protein Homology CDS 73090 73911 . - 0 ID=cds-WP_002210759.1;Parent=gene-YPIP275_RS13535;Dbxref=GenBank:WP_002210759.1;Name=WP_002210759.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713393.1;locus_tag=YPIP275_RS13535;product=pyridoxal phosphatase;protein_id=WP_002210759.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 74202 75206 . + . ID=gene-YPIP275_RS13540;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=YPIP275_RS13540;old_locus_tag=YPIP275_1169 NZ_AAOS02000013.1 Protein Homology CDS 74202 75206 . + 0 ID=cds-WP_002210760.1;Parent=gene-YPIP275_RS13540;Dbxref=GenBank:WP_002210760.1;Name=WP_002210760.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210760.1;locus_tag=YPIP275_RS13540;product=6-phosphogluconolactonase;protein_id=WP_002210760.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 75391 76659 . - . ID=gene-YPIP275_RS13545;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13545;old_locus_tag=YPIP275_1170 NZ_AAOS02000013.1 Protein Homology CDS 75391 76659 . - 0 ID=cds-WP_002210761.1;Parent=gene-YPIP275_RS13545;Dbxref=GenBank:WP_002210761.1;Name=WP_002210761.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=S-adenosyl-L-methionine:8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353917.1;locus_tag=YPIP275_RS13545;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_002210761.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 76758 77795 . + . ID=gene-YPIP275_RS13550;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13550;old_locus_tag=YPIP275_1171 NZ_AAOS02000013.1 Protein Homology CDS 76758 77795 . + 0 ID=cds-WP_002210762.1;Parent=gene-YPIP275_RS13550;Dbxref=GenBank:WP_002210762.1;Name=WP_002210762.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005745.1;locus_tag=YPIP275_RS13550;product=biotin synthase BioB;protein_id=WP_002210762.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 77795 78946 . + . ID=gene-YPIP275_RS13555;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=YPIP275_RS13555;old_locus_tag=YPIP275_1172 NZ_AAOS02000013.1 Protein Homology CDS 77795 78946 . + 0 ID=cds-WP_002210763.1;Parent=gene-YPIP275_RS13555;Dbxref=GenBank:WP_002210763.1;Name=WP_002210763.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105479.1;locus_tag=YPIP275_RS13555;product=8-amino-7-oxononanoate synthase;protein_id=WP_002210763.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 78930 79733 . + . ID=gene-YPIP275_RS13560;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=YPIP275_RS13560;old_locus_tag=YPIP275_1173 NZ_AAOS02000013.1 Protein Homology CDS 78930 79733 . + 0 ID=cds-WP_002210764.1;Parent=gene-YPIP275_RS13560;Dbxref=GenBank:WP_002210764.1;Name=WP_002210764.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210764.1;locus_tag=YPIP275_RS13560;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_002210764.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 79726 80448 . + . ID=gene-YPIP275_RS13565;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=YPIP275_RS13565;old_locus_tag=YPIP275_1174 NZ_AAOS02000013.1 Protein Homology CDS 79726 80448 . + 0 ID=cds-WP_002216554.1;Parent=gene-YPIP275_RS13565;Dbxref=GenBank:WP_002216554.1;Name=WP_002216554.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105477.1;locus_tag=YPIP275_RS13565;product=dethiobiotin synthase;protein_id=WP_002216554.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 80600 81310 . - . ID=gene-YPIP275_RS13570;Name=YPIP275_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13570;old_locus_tag=YPIP275_1175 NZ_AAOS02000013.1 Protein Homology CDS 80600 81310 . - 0 ID=cds-WP_002210766.1;Parent=gene-YPIP275_RS13570;Dbxref=GenBank:WP_002210766.1;Name=WP_002210766.1;Ontology_term=GO:0015803,GO:0005524,GO:0015658,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,branched-chain amino acid transmembrane transporter activity|0015658||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105476.1;locus_tag=YPIP275_RS13570;product=branched-chain amino acid ABC transporter ATP-binding protein;protein_id=WP_002210766.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 82400 84415 . + . ID=gene-YPIP275_RS13575;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13575;old_locus_tag=YPIP275_1176 NZ_AAOS02000013.1 Protein Homology CDS 82400 84415 . + 0 ID=cds-WP_002210767.1;Parent=gene-YPIP275_RS13575;Dbxref=GenBank:WP_002210767.1;Name=WP_002210767.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005751.1;locus_tag=YPIP275_RS13575;product=excinuclease ABC subunit UvrB;protein_id=WP_002210767.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 84707 84952 . + . ID=gene-YPIP275_RS13580;Name=YPIP275_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13580;old_locus_tag=YPIP275_1177 NZ_AAOS02000013.1 Protein Homology CDS 84707 84952 . + 0 ID=cds-WP_002210768.1;Parent=gene-YPIP275_RS13580;Dbxref=GenBank:WP_002210768.1;Name=WP_002210768.1;Ontology_term=GO:0003677,GO:0003690;gbkey=CDS;go_function=DNA binding|0003677||IEA,double-stranded DNA binding|0003690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210768.1;locus_tag=YPIP275_RS13580;product=VF530 family protein;protein_id=WP_002210768.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 85083 86006 . - . ID=gene-YPIP275_RS13585;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=YPIP275_RS13585;old_locus_tag=YPIP275_1178 NZ_AAOS02000013.1 Protein Homology CDS 85083 86006 . - 0 ID=cds-WP_002210769.1;Parent=gene-YPIP275_RS13585;Dbxref=GenBank:WP_002210769.1;Name=WP_002210769.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210769.1;locus_tag=YPIP275_RS13585;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_002210769.1;transl_table=11 NZ_AAOS02000013.1 cmsearch riboswitch 86405 86551 . + . ID=id-NZ_AAOS02000013.1:86405..86551;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_AAOS02000013.1 RefSeq gene 86538 87518 . + . ID=gene-YPIP275_RS13595;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13595;old_locus_tag=YPIP275_1180 NZ_AAOS02000013.1 Protein Homology CDS 86538 87518 . + 0 ID=cds-WP_002210771.1;Parent=gene-YPIP275_RS13595;Dbxref=GenBank:WP_002210771.1;Name=WP_002210771.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210771.1;locus_tag=YPIP275_RS13595;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_002210771.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 87619 88098 . + . ID=gene-YPIP275_RS13600;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=YPIP275_RS13600;old_locus_tag=YPIP275_1181 NZ_AAOS02000013.1 Protein Homology CDS 87619 88098 . + 0 ID=cds-WP_002210772.1;Parent=gene-YPIP275_RS13600;Dbxref=GenBank:WP_002210772.1;Name=WP_002210772.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210772.1;locus_tag=YPIP275_RS13600;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_002210772.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 88095 88340 . + . ID=gene-YPIP275_RS13605;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=YPIP275_RS13605;old_locus_tag=YPIP275_1182 NZ_AAOS02000013.1 Protein Homology CDS 88095 88340 . + 0 ID=cds-WP_002210773.1;Parent=gene-YPIP275_RS13605;Dbxref=GenBank:WP_002210773.1;Name=WP_002210773.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210773.1;locus_tag=YPIP275_RS13605;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_002210773.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 88343 88795 . + . ID=gene-YPIP275_RS13610;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=YPIP275_RS13610;old_locus_tag=YPIP275_1183 NZ_AAOS02000013.1 Protein Homology CDS 88343 88795 . + 0 ID=cds-WP_002210774.1;Parent=gene-YPIP275_RS13610;Dbxref=GenBank:WP_002210774.1;Name=WP_002210774.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210774.1;locus_tag=YPIP275_RS13610;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_002210774.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 88938 89648 . + . ID=gene-YPIP275_RS13615;Name=YPIP275_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13615;old_locus_tag=YPIP275_1184 NZ_AAOS02000013.1 Protein Homology CDS 88938 89648 . + 0 ID=cds-WP_002210775.1;Parent=gene-YPIP275_RS13615;Dbxref=GenBank:WP_002210775.1;Name=WP_002210775.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210775.1;locus_tag=YPIP275_RS13615;product=Bax inhibitor-1/YccA family protein;protein_id=WP_002210775.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 89883 90341 . + . ID=gene-YPIP275_RS13625;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13625;old_locus_tag=YPIP275_1185 NZ_AAOS02000013.1 Protein Homology CDS 89883 90341 . + 0 ID=cds-WP_002213775.1-19;Parent=gene-YPIP275_RS13625;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS13625;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 90756 91685 . + . ID=gene-YPIP275_RS13630;Name=YPIP275_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13630;old_locus_tag=YPIP275_1186 NZ_AAOS02000013.1 Protein Homology CDS 90756 91685 . + 0 ID=cds-WP_002210776.1;Parent=gene-YPIP275_RS13630;Dbxref=GenBank:WP_002210776.1;Name=WP_002210776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210776.1;locus_tag=YPIP275_RS13630;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_002210776.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 91985 92923 . + . ID=gene-YPIP275_RS13635;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=YPIP275_RS13635;old_locus_tag=YPIP275_1187 NZ_AAOS02000013.1 Protein Homology CDS 91985 92923 . + 0 ID=cds-WP_002228612.1;Parent=gene-YPIP275_RS13635;Dbxref=GenBank:WP_002228612.1;Name=WP_002228612.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228612.1;locus_tag=YPIP275_RS13635;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_002228612.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 92997 93176 . - . ID=gene-YPIP275_RS13640;Name=YPIP275_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13640;old_locus_tag=YPIP275_1188 NZ_AAOS02000013.1 Protein Homology CDS 92997 93176 . - 0 ID=cds-WP_002210778.1;Parent=gene-YPIP275_RS13640;Dbxref=GenBank:WP_002210778.1;Name=WP_002210778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210778.1;locus_tag=YPIP275_RS13640;product=hypothetical protein;protein_id=WP_002210778.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 93515 94450 . + . ID=gene-YPIP275_RS13645;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=YPIP275_RS13645;old_locus_tag=YPIP275_1190 NZ_AAOS02000013.1 Protein Homology CDS 93515 94450 . + 0 ID=cds-WP_002210780.1;Parent=gene-YPIP275_RS13645;Dbxref=GenBank:WP_002210780.1;Name=WP_002210780.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105464.1;locus_tag=YPIP275_RS13645;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_002210780.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 94571 96283 . - . ID=gene-YPIP275_RS13650;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=YPIP275_RS13650;old_locus_tag=YPIP275_1191 NZ_AAOS02000013.1 Protein Homology CDS 94571 96283 . - 0 ID=cds-WP_002210781.1;Parent=gene-YPIP275_RS13650;Dbxref=GenBank:WP_002210781.1;Name=WP_002210781.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210781.1;locus_tag=YPIP275_RS13650;product=D-lactate dehydrogenase;protein_id=WP_002210781.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 96493 97032 . + . ID=gene-YPIP275_RS13655;Name=cyaB;gbkey=Gene;gene=cyaB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13655;old_locus_tag=YPIP275_1192 NZ_AAOS02000013.1 Protein Homology CDS 96493 97032 . + 0 ID=cds-WP_002210782.1;Parent=gene-YPIP275_RS13655;Dbxref=GenBank:WP_002210782.1;Name=WP_002210782.1;gbkey=CDS;gene=cyaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210782.1;locus_tag=YPIP275_RS13655;product=class IV adenylate cyclase;protein_id=WP_002210782.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 97058 97399 . - . ID=gene-YPIP275_RS13660;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=YPIP275_RS13660;old_locus_tag=YPIP275_1193 NZ_AAOS02000013.1 Protein Homology CDS 97058 97399 . - 0 ID=cds-WP_002214185.1;Parent=gene-YPIP275_RS13660;Dbxref=GenBank:WP_002214185.1;Name=WP_002214185.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005189583.1;locus_tag=YPIP275_RS13660;product=HNH nuclease YajD;protein_id=WP_002214185.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 97712 98815 . + . ID=gene-YPIP275_RS13665;Name=YPIP275_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13665;old_locus_tag=YPIP275_1195 NZ_AAOS02000013.1 Protein Homology CDS 97712 98815 . + 0 ID=cds-WP_002210785.1;Parent=gene-YPIP275_RS13665;Dbxref=GenBank:WP_002210785.1;Name=WP_002210785.1;Ontology_term=GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191976.1;locus_tag=YPIP275_RS13665;product=suppressor of fused domain protein;protein_id=WP_002210785.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 99000 99248 . + . ID=gene-YPIP275_RS13670;Name=YPIP275_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13670;old_locus_tag=YPIP275_1196 NZ_AAOS02000013.1 Protein Homology CDS 99000 99248 . + 0 ID=cds-WP_002210786.1;Parent=gene-YPIP275_RS13670;Dbxref=GenBank:WP_002210786.1;Name=WP_002210786.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227447.1;locus_tag=YPIP275_RS13670;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_002210786.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 99456 100292 . + . ID=gene-YPIP275_RS13675;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=YPIP275_RS13675;old_locus_tag=YPIP275_1197 NZ_AAOS02000013.1 Protein Homology CDS 99456 100292 . + 0 ID=cds-WP_002210787.1;Parent=gene-YPIP275_RS13675;Dbxref=GenBank:WP_002210787.1;Name=WP_002210787.1;Ontology_term=GO:0015716,GO:0005524,GO:0015416,GO:0016020;gbkey=CDS;gene=phnC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005189589.1;locus_tag=YPIP275_RS13675;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_002210787.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 100329 101258 . + . ID=gene-YPIP275_RS13680;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;locus_tag=YPIP275_RS13680;old_locus_tag=YPIP275_1198 NZ_AAOS02000013.1 Protein Homology CDS 100329 101258 . + 0 ID=cds-WP_002210788.1;Parent=gene-YPIP275_RS13680;Dbxref=GenBank:WP_002210788.1;Name=WP_002210788.1;Ontology_term=GO:0015716,GO:0043190;gbkey=CDS;gene=phnD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005189592.1;locus_tag=YPIP275_RS13680;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_002210788.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 101361 102221 . + . ID=gene-YPIP275_RS13685;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=YPIP275_RS13685;old_locus_tag=YPIP275_1199 NZ_AAOS02000013.1 Protein Homology CDS 101361 102221 . + 0 ID=cds-WP_002210789.1;Parent=gene-YPIP275_RS13685;Dbxref=GenBank:WP_002210789.1;Name=WP_002210789.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304354.1;locus_tag=YPIP275_RS13685;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_002210789.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 102224 103105 . + . ID=gene-YPIP275_RS13690;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=YPIP275_RS13690;old_locus_tag=YPIP275_1200 NZ_AAOS02000013.1 Protein Homology CDS 102224 103105 . + 0 ID=cds-WP_002210790.1;Parent=gene-YPIP275_RS13690;Dbxref=GenBank:WP_002210790.1;Name=WP_002210790.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210790.1;locus_tag=YPIP275_RS13690;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_002210790.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 103351 103824 . + . ID=gene-YPIP275_RS13695;Name=YPIP275_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13695;old_locus_tag=YPIP275_1201 NZ_AAOS02000013.1 Protein Homology CDS 103351 103824 . + 0 ID=cds-WP_002210791.1;Parent=gene-YPIP275_RS13695;Dbxref=GenBank:WP_002210791.1;Name=WP_002210791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171781.1;locus_tag=YPIP275_RS13695;product=YehS family protein;protein_id=WP_002210791.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 104259 105527 . + . ID=gene-YPIP275_RS13700;Name=urtA;gbkey=Gene;gene=urtA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13700;old_locus_tag=YPIP275_1202 NZ_AAOS02000013.1 Protein Homology CDS 104259 105527 . + 0 ID=cds-WP_002210792.1;Parent=gene-YPIP275_RS13700;Dbxref=GenBank:WP_002210792.1;Name=WP_002210792.1;Ontology_term=GO:0015840,GO:0033219,GO:0033221,GO:0030288,GO:0055052;gbkey=CDS;gene=urtA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=urea binding|0033219||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210792.1;locus_tag=YPIP275_RS13700;product=urea ABC transporter substrate-binding protein;protein_id=WP_002210792.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 105651 107252 . + . ID=gene-YPIP275_RS13705;Name=urtB;gbkey=Gene;gene=urtB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13705;old_locus_tag=YPIP275_1203 NZ_AAOS02000013.1 Protein Homology CDS 105651 107252 . + 0 ID=cds-WP_002210793.1;Parent=gene-YPIP275_RS13705;Dbxref=GenBank:WP_002210793.1;Name=WP_002210793.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014609102.1;locus_tag=YPIP275_RS13705;product=urea ABC transporter permease subunit UrtB;protein_id=WP_002210793.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 107252 108328 . + . ID=gene-YPIP275_RS13710;Name=urtC;gbkey=Gene;gene=urtC;gene_biotype=protein_coding;locus_tag=YPIP275_RS13710;old_locus_tag=YPIP275_1204 NZ_AAOS02000013.1 Protein Homology CDS 107252 108328 . + 0 ID=cds-WP_002210794.1;Parent=gene-YPIP275_RS13710;Dbxref=GenBank:WP_002210794.1;Name=WP_002210794.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105459.1;locus_tag=YPIP275_RS13710;product=urea ABC transporter permease subunit UrtC;protein_id=WP_002210794.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 108325 109161 . + . ID=gene-YPIP275_RS13715;Name=urtD;gbkey=Gene;gene=urtD;gene_biotype=protein_coding;locus_tag=YPIP275_RS13715;old_locus_tag=YPIP275_1205 NZ_AAOS02000013.1 Protein Homology CDS 108325 109161 . + 0 ID=cds-WP_002210795.1;Parent=gene-YPIP275_RS13715;Dbxref=GenBank:WP_002210795.1;Name=WP_002210795.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtD;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158844.1;locus_tag=YPIP275_RS13715;product=urea ABC transporter ATP-binding protein UrtD;protein_id=WP_002210795.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 109255 109953 . + . ID=gene-YPIP275_RS13720;Name=urtE;gbkey=Gene;gene=urtE;gene_biotype=protein_coding;locus_tag=YPIP275_RS13720;old_locus_tag=YPIP275_1206 NZ_AAOS02000013.1 Protein Homology CDS 109255 109953 . + 0 ID=cds-WP_002223523.1;Parent=gene-YPIP275_RS13720;Dbxref=GenBank:WP_002223523.1;Name=WP_002223523.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223523.1;locus_tag=YPIP275_RS13720;product=urea ABC transporter ATP-binding subunit UrtE;protein_id=WP_002223523.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 110068 110925 . + . ID=gene-YPIP275_RS13725;Name=YPIP275_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13725;old_locus_tag=YPIP275_1207 NZ_AAOS02000013.1 Protein Homology CDS 110068 110925 . + 0 ID=cds-WP_002210797.1;Parent=gene-YPIP275_RS13725;Dbxref=GenBank:WP_002210797.1;Name=WP_002210797.1;Ontology_term=GO:0008198,GO:0016705;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105458.1;locus_tag=YPIP275_RS13725;product=2OG-Fe(II) oxygenase;protein_id=WP_002210797.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 110949 112364 . + . ID=gene-YPIP275_RS13730;Name=YPIP275_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13730;old_locus_tag=YPIP275_1208 NZ_AAOS02000013.1 Protein Homology CDS 110949 112364 . + 0 ID=cds-WP_002210798.1;Parent=gene-YPIP275_RS13730;Dbxref=GenBank:WP_002210798.1;Name=WP_002210798.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210798.1;locus_tag=YPIP275_RS13730;product=pyridoxal phosphate-dependent decarboxylase family protein;protein_id=WP_002210798.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 112540 113394 . - . ID=gene-YPIP275_RS13735;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13735;old_locus_tag=YPIP275_1209 NZ_AAOS02000013.1 Protein Homology CDS 112540 113394 . - 0 ID=cds-WP_002210799.1;Parent=gene-YPIP275_RS13735;Dbxref=GenBank:WP_002210799.1;Name=WP_002210799.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210799.1;locus_tag=YPIP275_RS13735;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_002210799.1;transl_table=11 NZ_AAOS02000013.1 RefSeq pseudogene 114130 115062 . + . ID=gene-YPIP275_RS28755;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=pseudogene;locus_tag=YPIP275_RS28755;pseudo=true NZ_AAOS02000013.1 Protein Homology CDS 114130 115062 . + 0 ID=cds-YPIP275_RS28755;Parent=gene-YPIP275_RS28755;Note=internal stop;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191984.1;locus_tag=YPIP275_RS28755;product=glycine betaine ABC transporter substrate-binding protein OsmF;pseudo=true;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 115323 116477 . + . ID=gene-YPIP275_RS13750;Name=YPIP275_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13750;old_locus_tag=YPIP275_1213 NZ_AAOS02000013.1 Protein Homology CDS 115323 116477 . + 0 ID=cds-WP_002210801.1;Parent=gene-YPIP275_RS13750;Dbxref=GenBank:WP_002210801.1;Name=WP_002210801.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210801.1;locus_tag=YPIP275_RS13750;product=ABC transporter permease;protein_id=WP_002210801.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 116474 117412 . + . ID=gene-YPIP275_RS13755;Name=YPIP275_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13755;old_locus_tag=YPIP275_1214 NZ_AAOS02000013.1 Protein Homology CDS 116474 117412 . + 0 ID=cds-WP_002210802.1;Parent=gene-YPIP275_RS13755;Dbxref=GenBank:WP_002210802.1;Name=WP_002210802.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105454.1;locus_tag=YPIP275_RS13755;product=ABC transporter ATP-binding protein;protein_id=WP_002210802.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 117547 118245 . + . ID=gene-YPIP275_RS13760;Name=YPIP275_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13760;old_locus_tag=YPIP275_1215 NZ_AAOS02000013.1 Protein Homology CDS 117547 118245 . + 0 ID=cds-WP_002353933.1;Parent=gene-YPIP275_RS13760;Dbxref=GenBank:WP_002353933.1;Name=WP_002353933.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353933.1;locus_tag=YPIP275_RS13760;product=ABC transporter permease;protein_id=WP_002353933.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 118783 120117 . + . ID=gene-YPIP275_RS13765;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=YPIP275_RS13765;old_locus_tag=YPIP275_1216 NZ_AAOS02000013.1 Protein Homology CDS 118783 120117 . + 0 ID=cds-WP_002210804.1;Parent=gene-YPIP275_RS13765;Dbxref=GenBank:WP_002210804.1;Name=WP_002210804.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674029.1;locus_tag=YPIP275_RS13765;product=arginine/agmatine antiporter;protein_id=WP_002210804.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 120187 122493 . + . ID=gene-YPIP275_RS13770;Name=YPIP275_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13770;old_locus_tag=YPIP275_1217 NZ_AAOS02000013.1 Protein Homology CDS 120187 122493 . + 0 ID=cds-WP_002210805.1;Parent=gene-YPIP275_RS13770;Dbxref=GenBank:WP_002210805.1;Name=WP_002210805.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191987.1;locus_tag=YPIP275_RS13770;product=Orn/Lys/Arg family decarboxylase;protein_id=WP_002210805.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 122611 122814 . - . ID=gene-YPIP275_RS13775;Name=YPIP275_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13775;old_locus_tag=YPIP275_1218 NZ_AAOS02000013.1 Protein Homology CDS 122611 122814 . - 0 ID=cds-WP_002210806.1;Parent=gene-YPIP275_RS13775;Dbxref=GenBank:WP_002210806.1;Name=WP_002210806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210806.1;locus_tag=YPIP275_RS13775;product=YohO family small membrane protein;protein_id=WP_002210806.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 122939 123829 . - . ID=gene-YPIP275_RS13780;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13780;old_locus_tag=YPIP275_1219 NZ_AAOS02000013.1 Protein Homology CDS 122939 123829 . - 0 ID=cds-WP_002210807.1;Parent=gene-YPIP275_RS13780;Dbxref=GenBank:WP_002210807.1;Name=WP_002210807.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210807.1;locus_tag=YPIP275_RS13780;product=drug/metabolite exporter YedA;protein_id=WP_002210807.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 124241 125356 . - . ID=gene-YPIP275_RS13785;Name=ompF2;gbkey=Gene;gene=ompF2;gene_biotype=protein_coding;locus_tag=YPIP275_RS13785;old_locus_tag=YPIP275_1221 NZ_AAOS02000013.1 Protein Homology CDS 124241 125356 . - 0 ID=cds-WP_002210809.1;Parent=gene-YPIP275_RS13785;Dbxref=GenBank:WP_002210809.1;Name=WP_002210809.1;gbkey=CDS;gene=ompF2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158804.1;locus_tag=YPIP275_RS13785;product=porin OmpF2;protein_id=WP_002210809.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 125626 127806 . + . ID=gene-YPIP275_RS13790;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=YPIP275_RS13790;old_locus_tag=YPIP275_1222 NZ_AAOS02000013.1 Protein Homology CDS 125626 127806 . + 0 ID=cds-WP_002210810.1;Parent=gene-YPIP275_RS13790;Dbxref=GenBank:WP_002210810.1;Name=WP_002210810.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210810.1;locus_tag=YPIP275_RS13790;product=ATP-dependent DNA helicase DinG;protein_id=WP_002210810.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 127874 129313 . - . ID=gene-YPIP275_RS13795;Name=katA;gbkey=Gene;gene=katA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13795;old_locus_tag=YPIP275_1223 NZ_AAOS02000013.1 Protein Homology CDS 127874 129313 . - 0 ID=cds-WP_002210811.1;Parent=gene-YPIP275_RS13795;Dbxref=GenBank:WP_002210811.1;Name=WP_002210811.1;gbkey=CDS;gene=katA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210811.1;locus_tag=YPIP275_RS13795;product=catalase KatA;protein_id=WP_002210811.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 129674 130216 . + . ID=gene-YPIP275_RS13800;Name=YPIP275_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13800;old_locus_tag=YPIP275_1224 NZ_AAOS02000013.1 Protein Homology CDS 129674 130216 . + 0 ID=cds-WP_002210812.1;Parent=gene-YPIP275_RS13800;Dbxref=GenBank:WP_002210812.1;Name=WP_002210812.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210812.1;locus_tag=YPIP275_RS13800;product=YfaZ family protein;protein_id=WP_002210812.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 130473 131681 . - . ID=gene-YPIP275_RS13805;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=YPIP275_RS13805;old_locus_tag=YPIP275_1225 NZ_AAOS02000013.1 Protein Homology CDS 130473 131681 . - 0 ID=cds-WP_002210813.1;Parent=gene-YPIP275_RS13805;Dbxref=GenBank:WP_002210813.1;Name=WP_002210813.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221775.1;locus_tag=YPIP275_RS13805;product=tyrosine transporter TyrP;protein_id=WP_002210813.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 132300 133493 . + . ID=gene-YPIP275_RS13810;Name=YPIP275_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13810;old_locus_tag=YPIP275_1226 NZ_AAOS02000013.1 Protein Homology CDS 132300 133493 . + 0 ID=cds-WP_002210814.1;Parent=gene-YPIP275_RS13810;Dbxref=GenBank:WP_002210814.1;Name=WP_002210814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191993.1;locus_tag=YPIP275_RS13810;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_002210814.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 133551 134060 . - . ID=gene-YPIP275_RS13815;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=YPIP275_RS13815;old_locus_tag=YPIP275_1227 NZ_AAOS02000013.1 Protein Homology CDS 133551 134060 . - 0 ID=cds-WP_002210815.1;Parent=gene-YPIP275_RS13815;Dbxref=GenBank:WP_002210815.1;Name=WP_002210815.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223516.1;locus_tag=YPIP275_RS13815;product=serine protease inhibitor ecotin;protein_id=WP_002210815.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 134095 134352 . - . ID=gene-YPIP275_RS13820;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=YPIP275_RS13820;old_locus_tag=YPIP275_1228 NZ_AAOS02000013.1 Protein Homology CDS 134095 134352 . - 0 ID=cds-WP_002210816.1;Parent=gene-YPIP275_RS13820;Dbxref=GenBank:WP_002210816.1;Name=WP_002210816.1;Ontology_term=GO:0051537;gbkey=CDS;gene=yfaE;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210816.1;locus_tag=YPIP275_RS13820;product=class I ribonucleotide reductase maintenance protein YfaE;protein_id=WP_002210816.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 134356 135486 . - . ID=gene-YPIP275_RS13825;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13825;old_locus_tag=YPIP275_1229 NZ_AAOS02000013.1 Protein Homology CDS 134356 135486 . - 0 ID=cds-WP_002210817.1;Parent=gene-YPIP275_RS13825;Dbxref=GenBank:WP_002210817.1;Name=WP_002210817.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461220.1;locus_tag=YPIP275_RS13825;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_002210817.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 135649 137937 . - . ID=gene-YPIP275_RS13830;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13830;old_locus_tag=YPIP275_1230 NZ_AAOS02000013.1 Protein Homology CDS 135649 137937 . - 0 ID=cds-WP_002210818.1;Parent=gene-YPIP275_RS13830;Dbxref=GenBank:WP_002210818.1;Name=WP_002210818.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=YPIP275_RS13830;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_002210818.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 138431 139159 . - . ID=gene-YPIP275_RS13835;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=YPIP275_RS13835;old_locus_tag=YPIP275_1232 NZ_AAOS02000013.1 Protein Homology CDS 138431 139159 . - 0 ID=cds-WP_002210820.1;Parent=gene-YPIP275_RS13835;Dbxref=GenBank:WP_002210820.1;Name=WP_002210820.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210820.1;locus_tag=YPIP275_RS13835;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_002210820.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 139421 142096 . + . ID=gene-YPIP275_RS13840;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13840;old_locus_tag=YPIP275_1233 NZ_AAOS02000013.1 Protein Homology CDS 139421 142096 . + 0 ID=cds-WP_002210821.1;Parent=gene-YPIP275_RS13840;Dbxref=GenBank:WP_002210821.1;Name=WP_002210821.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210821.1;locus_tag=YPIP275_RS13840;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_002210821.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 142308 145157 . + . ID=gene-YPIP275_RS13850;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=YPIP275_RS13850;old_locus_tag=YPIP275_1235 NZ_AAOS02000013.1 Protein Homology CDS 142308 145157 . + 0 ID=cds-WP_002226609.1;Parent=gene-YPIP275_RS13850;Dbxref=GenBank:WP_002226609.1;Name=WP_002226609.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815975.1;locus_tag=YPIP275_RS13850;product=two-component system sensor histidine kinase RcsC;protein_id=WP_002226609.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 145225 145878 . - . ID=gene-YPIP275_RS13855;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=YPIP275_RS13855;old_locus_tag=YPIP275_1236 NZ_AAOS02000013.1 Protein Homology CDS 145225 145878 . - 0 ID=cds-WP_002210824.1;Parent=gene-YPIP275_RS13855;Dbxref=GenBank:WP_002210824.1;Name=WP_002210824.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210824.1;locus_tag=YPIP275_RS13855;product=response regulator transcription factor RcsB;protein_id=WP_002210824.1;transl_table=11 NZ_AAOS02000013.1 RefSeq pseudogene 145881 148573 . - . ID=gene-YPIP275_RS13865;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=pseudogene;locus_tag=YPIP275_RS13865;old_locus_tag=YPIP275_1238;pseudo=true NZ_AAOS02000013.1 Protein Homology CDS 145881 148573 . - 0 ID=cds-YPIP275_RS13865;Parent=gene-YPIP275_RS13865;Note=frameshifted;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082050.1;locus_tag=YPIP275_RS13865;product=phosphotransferase RcsD;pseudo=true;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 148597 149751 . - . ID=gene-YPIP275_RS13870;Name=YPIP275_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13870;old_locus_tag=YPIP275_1239 NZ_AAOS02000013.1 Protein Homology CDS 148597 149751 . - 0 ID=cds-WP_002210825.1;Parent=gene-YPIP275_RS13870;Dbxref=GenBank:WP_002210825.1;Name=WP_002210825.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004708700.1;locus_tag=YPIP275_RS13870;product=MFS transporter;protein_id=WP_002210825.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 150854 151969 . + . ID=gene-YPIP275_RS13880;Name=YPIP275_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13880;old_locus_tag=YPIP275_1240 NZ_AAOS02000013.1 Protein Homology CDS 150854 151969 . + 0 ID=cds-WP_002210826.1;Parent=gene-YPIP275_RS13880;Dbxref=GenBank:WP_002210826.1;Name=WP_002210826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210826.1;locus_tag=YPIP275_RS13880;product=porin OmpC;protein_id=WP_002210826.1;transl_table=11 NZ_AAOS02000013.1 RefSeq gene 152171 152629 . + . ID=gene-YPIP275_RS13885;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13885;old_locus_tag=YPIP275_1241 NZ_AAOS02000013.1 Protein Homology CDS 152171 152629 . + 0 ID=cds-WP_002213775.1-20;Parent=gene-YPIP275_RS13885;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS13885;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 ##sequence-region NZ_AAOS02000012.1 1 154610 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000012.1 RefSeq region 1 154610 . + . ID=NZ_AAOS02000012.1:1..154610;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000012.1 RefSeq gene 112 309 . - . ID=gene-YPIP275_RS12350;Name=YPIP275_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12350;old_locus_tag=YPIP275_1353 NZ_AAOS02000012.1 Protein Homology CDS 112 309 . - 0 ID=cds-WP_002211040.1-4;Parent=gene-YPIP275_RS12350;Dbxref=GenBank:WP_002211040.1;Name=WP_002211040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211040.1;locus_tag=YPIP275_RS12350;product=hypothetical protein;protein_id=WP_002211040.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 506 754 . - . ID=gene-YPIP275_RS27385;Name=YPIP275_RS27385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27385;old_locus_tag=YPIP275_1355 NZ_AAOS02000012.1 Protein Homology CDS 506 754 . - 0 ID=cds-WP_001399975.1-3;Parent=gene-YPIP275_RS27385;Dbxref=GenBank:WP_001399975.1;Name=WP_001399975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001419846.1;locus_tag=YPIP275_RS27385;product=hypothetical protein;protein_id=WP_001399975.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 843 2087 . - . ID=gene-YPIP275_RS12360;Name=YPIP275_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12360;old_locus_tag=YPIP275_1356 NZ_AAOS02000012.1 Protein Homology CDS 843 2087 . - 0 ID=cds-WP_000722136.1-3;Parent=gene-YPIP275_RS12360;Dbxref=GenBank:WP_000722136.1;Name=WP_000722136.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001388363.1;locus_tag=YPIP275_RS12360;product=type II secretion system protein GspD;protein_id=WP_000722136.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 2087 3112 . - . ID=gene-YPIP275_RS12365;Name=YPIP275_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12365;old_locus_tag=YPIP275_1357 NZ_AAOS02000012.1 Protein Homology CDS 2087 3112 . - 0 ID=cds-WP_002210570.1-3;Parent=gene-YPIP275_RS12365;Dbxref=GenBank:WP_002210570.1;Name=WP_002210570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001430025.1;locus_tag=YPIP275_RS12365;product=zonular occludens toxin family protein;protein_id=WP_002210570.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 3116 3403 . - . ID=gene-YPIP275_RS12370;Name=YPIP275_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12370;old_locus_tag=YPIP275_1358 NZ_AAOS02000012.1 Protein Homology CDS 3116 3403 . - 0 ID=cds-WP_000467041.1-3;Parent=gene-YPIP275_RS12370;Dbxref=GenBank:WP_000467041.1;Name=WP_000467041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000467082.1;locus_tag=YPIP275_RS12370;product=DUF2523 domain-containing protein;protein_id=WP_000467041.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 3416 4978 . - . ID=gene-YPIP275_RS12375;Name=YPIP275_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12375;old_locus_tag=YPIP275_1359 NZ_AAOS02000012.1 Protein Homology CDS 3416 4978 . - 0 ID=cds-WP_002222443.1-3;Parent=gene-YPIP275_RS12375;Dbxref=GenBank:WP_002222443.1;Name=WP_002222443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222443.1;locus_tag=YPIP275_RS12375;product=hypothetical protein;protein_id=WP_002222443.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 5193 5426 . - . ID=gene-YPIP275_RS12380;Name=YPIP275_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12380;old_locus_tag=YPIP275_1360 NZ_AAOS02000012.1 Protein Homology CDS 5193 5426 . - 0 ID=cds-WP_000473544.1-3;Parent=gene-YPIP275_RS12380;Dbxref=GenBank:WP_000473544.1;Name=WP_000473544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534187.1;locus_tag=YPIP275_RS12380;product=hypothetical protein;protein_id=WP_000473544.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 5462 5713 . - . ID=gene-YPIP275_RS12385;Name=YPIP275_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12385;old_locus_tag=YPIP275_1361 NZ_AAOS02000012.1 Protein Homology CDS 5462 5713 . - 0 ID=cds-WP_000381239.1-3;Parent=gene-YPIP275_RS12385;Dbxref=GenBank:WP_000381239.1;Name=WP_000381239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536107.1;locus_tag=YPIP275_RS12385;product=membrane protein;protein_id=WP_000381239.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 5716 6033 . - . ID=gene-YPIP275_RS12390;Name=YPIP275_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12390;old_locus_tag=YPIP275_1362 NZ_AAOS02000012.1 Protein Homology CDS 5716 6033 . - 0 ID=cds-WP_000073835.1-3;Parent=gene-YPIP275_RS12390;Dbxref=GenBank:WP_000073835.1;Name=WP_000073835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000073833.1;locus_tag=YPIP275_RS12390;product=DNA-binding protein;protein_id=WP_000073835.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 6045 7097 . - . ID=gene-YPIP275_RS12395;Name=YPIP275_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12395;old_locus_tag=YPIP275_1363 NZ_AAOS02000012.1 Protein Homology CDS 6045 7097 . - 0 ID=cds-WP_000568107.1-3;Parent=gene-YPIP275_RS12395;Dbxref=GenBank:WP_000568107.1;Name=WP_000568107.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568107.1;locus_tag=YPIP275_RS12395;product=phage/plasmid replication protein%2C II/X family;protein_id=WP_000568107.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 7269 7715 . + . ID=gene-YPIP275_RS12400;Name=YPIP275_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12400;old_locus_tag=YPIP275_1364 NZ_AAOS02000012.1 Protein Homology CDS 7269 7715 . + 0 ID=cds-WP_000527682.1-2;Parent=gene-YPIP275_RS12400;Dbxref=GenBank:WP_000527682.1;Name=WP_000527682.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608238.1;locus_tag=YPIP275_RS12400;product=helix-turn-helix domain-containing protein;protein_id=WP_000527682.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 7812 8219 . + . ID=gene-YPIP275_RS12405;Name=YPIP275_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12405;old_locus_tag=YPIP275_1365 NZ_AAOS02000012.1 Protein Homology CDS 7812 8219 . + 0 ID=cds-WP_002210572.1;Parent=gene-YPIP275_RS12405;Dbxref=GenBank:WP_002210572.1;Name=WP_002210572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210572.1;locus_tag=YPIP275_RS12405;product=hypothetical protein;protein_id=WP_002210572.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 8244 8504 . + . ID=gene-YPIP275_RS12410;Name=YPIP275_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12410;old_locus_tag=YPIP275_1366 NZ_AAOS02000012.1 Protein Homology CDS 8244 8504 . + 0 ID=cds-WP_002210573.1;Parent=gene-YPIP275_RS12410;Dbxref=GenBank:WP_002210573.1;Name=WP_002210573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210573.1;locus_tag=YPIP275_RS12410;product=hypothetical protein;protein_id=WP_002210573.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 8894 10174 . + . ID=gene-YPIP275_RS12415;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=YPIP275_RS12415;old_locus_tag=YPIP275_1367 NZ_AAOS02000012.1 Protein Homology CDS 8894 10174 . + 0 ID=cds-WP_002210574.1;Parent=gene-YPIP275_RS12415;Dbxref=GenBank:WP_002210574.1;Name=WP_002210574.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304065.1;locus_tag=YPIP275_RS12415;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_002210574.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 10297 10965 . - . ID=gene-YPIP275_RS12420;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=YPIP275_RS12420;old_locus_tag=YPIP275_1368 NZ_AAOS02000012.1 Protein Homology CDS 10297 10965 . - 0 ID=cds-WP_002210575.1;Parent=gene-YPIP275_RS12420;Dbxref=GenBank:WP_002210575.1;Name=WP_002210575.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210575.1;locus_tag=YPIP275_RS12420;product=dethiobiotin synthase;protein_id=WP_002210575.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 11189 12406 . - . ID=gene-YPIP275_RS12425;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=YPIP275_RS12425;old_locus_tag=YPIP275_1369 NZ_AAOS02000012.1 Protein Homology CDS 11189 12406 . - 0 ID=cds-WP_002210576.1;Parent=gene-YPIP275_RS12425;Dbxref=GenBank:WP_002210576.1;Name=WP_002210576.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192479.1;locus_tag=YPIP275_RS12425;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_002210576.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 12620 13219 . - . ID=gene-YPIP275_RS12430;Name=YPIP275_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12430;old_locus_tag=YPIP275_1370 NZ_AAOS02000012.1 Protein Homology CDS 12620 13219 . - 0 ID=cds-WP_002214502.1;Parent=gene-YPIP275_RS12430;Dbxref=GenBank:WP_002214502.1;Name=WP_002214502.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: protein motif:HMM:NF015431.7;locus_tag=YPIP275_RS12430;product=LysR family substrate-binding domain-containing protein;protein_id=WP_002214502.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 13297 13485 . - . ID=gene-YPIP275_RS27390;Name=YPIP275_RS27390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27390 NZ_AAOS02000012.1 Protein Homology CDS 13297 13485 . - 0 ID=cds-WP_002364971.1;Parent=gene-YPIP275_RS27390;Dbxref=GenBank:WP_002364971.1;Name=WP_002364971.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002364971.1;locus_tag=YPIP275_RS27390;product=LysR family transcriptional regulator;protein_id=WP_002364971.1;transl_table=11 NZ_AAOS02000012.1 RefSeq pseudogene 13719 15017 . + . ID=gene-YPIP275_RS12435;Name=YPIP275_RS12435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS12435;old_locus_tag=YPIP275_1371;pseudo=true NZ_AAOS02000012.1 Protein Homology CDS 13719 15017 . + 0 ID=cds-YPIP275_RS12435;Parent=gene-YPIP275_RS12435;Note=internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192477.1;locus_tag=YPIP275_RS12435;product=MFS transporter;pseudo=true;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 15222 16157 . + . ID=gene-YPIP275_RS12440;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=YPIP275_RS12440;old_locus_tag=YPIP275_1372 NZ_AAOS02000012.1 Protein Homology CDS 15222 16157 . + 0 ID=cds-WP_002227921.1;Parent=gene-YPIP275_RS12440;Dbxref=GenBank:WP_002227921.1;Name=WP_002227921.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105083.1;locus_tag=YPIP275_RS12440;product=DNA replication terminus site-binding protein;protein_id=WP_002227921.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 16237 17634 . - . ID=gene-YPIP275_RS12445;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=YPIP275_RS12445;old_locus_tag=YPIP275_1373 NZ_AAOS02000012.1 Protein Homology CDS 16237 17634 . - 0 ID=cds-WP_002210578.1;Parent=gene-YPIP275_RS12445;Dbxref=GenBank:WP_002210578.1;Name=WP_002210578.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210578.1;locus_tag=YPIP275_RS12445;product=class II fumarate hydratase;protein_id=WP_002210578.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 17918 19093 . + . ID=gene-YPIP275_RS12450;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=YPIP275_RS12450;old_locus_tag=YPIP275_1374 NZ_AAOS02000012.1 Protein Homology CDS 17918 19093 . + 0 ID=cds-WP_002210579.1;Parent=gene-YPIP275_RS12450;Dbxref=GenBank:WP_002210579.1;Name=WP_002210579.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210579.1;locus_tag=YPIP275_RS12450;product=mannose-6-phosphate isomerase;protein_id=WP_002210579.1;transl_table=11 NZ_AAOS02000012.1 RefSeq pseudogene 19333 20025 . + . ID=gene-YPIP275_RS12455;Name=YPIP275_RS12455;end_range=20025,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS12455;old_locus_tag=YPIP275_1375;partial=true;pseudo=true NZ_AAOS02000012.1 Protein Homology CDS 19333 20025 . + 0 ID=cds-YPIP275_RS12455;Parent=gene-YPIP275_RS12455;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=20025,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192473.1;locus_tag=YPIP275_RS12455;partial=true;product=YdgA family protein;pseudo=true;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 20092 20874 . - . ID=gene-YPIP275_RS12460;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS12460;old_locus_tag=YPIP275_1376 NZ_AAOS02000012.1 Protein Homology CDS 20092 20874 . - 0 ID=cds-WP_001317493.1-28;Parent=gene-YPIP275_RS12460;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS12460;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000012.1 RefSeq pseudogene 20871 21892 . - . ID=gene-YPIP275_RS12465;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=YPIP275_RS12465;old_locus_tag=YPIP275_1377;pseudo=true NZ_AAOS02000012.1 Protein Homology CDS 20871 21892 . - 0 ID=cds-YPIP275_RS12465;Parent=gene-YPIP275_RS12465;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS12465;product=IS21-like element IS100 family transposase;pseudo=true;transl_table=11 NZ_AAOS02000012.1 RefSeq pseudogene 21972 22835 . + . ID=gene-YPIP275_RS12470;Name=YPIP275_RS12470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS12470;old_locus_tag=YPIP275_1379;partial=true;pseudo=true;start_range=.,21972 NZ_AAOS02000012.1 Protein Homology CDS 21972 22835 . + 0 ID=cds-YPIP275_RS12470;Parent=gene-YPIP275_RS12470;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192473.1;locus_tag=YPIP275_RS12470;partial=true;product=YdgA family protein;pseudo=true;start_range=.,21972;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 22884 23483 . - . ID=gene-YPIP275_RS12475;Name=YPIP275_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12475;old_locus_tag=YPIP275_1380 NZ_AAOS02000012.1 Protein Homology CDS 22884 23483 . - 0 ID=cds-WP_002210583.1;Parent=gene-YPIP275_RS12475;Dbxref=GenBank:WP_002210583.1;Name=WP_002210583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906195.1;locus_tag=YPIP275_RS12475;product=hypothetical protein;protein_id=WP_002210583.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 23689 24717 . - . ID=gene-YPIP275_RS12480;Name=YPIP275_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12480;old_locus_tag=YPIP275_1381 NZ_AAOS02000012.1 Protein Homology CDS 23689 24717 . - 0 ID=cds-WP_002210584.1;Parent=gene-YPIP275_RS12480;Dbxref=GenBank:WP_002210584.1;Name=WP_002210584.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210584.1;locus_tag=YPIP275_RS12480;product=bile acid:sodium symporter family protein;protein_id=WP_002210584.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 24911 25960 . - . ID=gene-YPIP275_RS12485;Name=YPIP275_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12485;old_locus_tag=YPIP275_1382 NZ_AAOS02000012.1 Protein Homology CDS 24911 25960 . - 0 ID=cds-WP_002210585.1;Parent=gene-YPIP275_RS12485;Dbxref=GenBank:WP_002210585.1;Name=WP_002210585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210585.1;locus_tag=YPIP275_RS12485;product=oxidoreductase;protein_id=WP_002210585.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 26088 27020 . - . ID=gene-YPIP275_RS12490;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=YPIP275_RS12490;old_locus_tag=YPIP275_1383 NZ_AAOS02000012.1 Protein Homology CDS 26088 27020 . - 0 ID=cds-WP_002210586.1;Parent=gene-YPIP275_RS12490;Dbxref=GenBank:WP_002210586.1;Name=WP_002210586.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192467.1;locus_tag=YPIP275_RS12490;product=arabinose operon transcriptional regulator AraC;protein_id=WP_002210586.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 27241 28290 . - . ID=gene-YPIP275_RS12495;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=YPIP275_RS12495;old_locus_tag=YPIP275_1384 NZ_AAOS02000012.1 Protein Homology CDS 27241 28290 . - 0 ID=cds-WP_002210587.1;Parent=gene-YPIP275_RS12495;Dbxref=GenBank:WP_002210587.1;Name=WP_002210587.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=araH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210587.1;locus_tag=YPIP275_RS12495;product=L-arabinose ABC transporter permease AraH;protein_id=WP_002210587.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 28308 29879 . - . ID=gene-YPIP275_RS12500;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=YPIP275_RS12500;old_locus_tag=YPIP275_1385 NZ_AAOS02000012.1 Protein Homology CDS 28308 29879 . - 0 ID=cds-WP_002210588.1;Parent=gene-YPIP275_RS12500;Dbxref=GenBank:WP_002210588.1;Name=WP_002210588.1;Ontology_term=GO:0042882,GO:0005524,GO:0015612,GO:0016020;gbkey=CDS;gene=araG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type L-arabinose transporter activity|0015612||IEA;go_process=L-arabinose transmembrane transport|0042882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210588.1;locus_tag=YPIP275_RS12500;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_002210588.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 29977 30960 . - . ID=gene-YPIP275_RS12505;Name=YPIP275_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12505;old_locus_tag=YPIP275_1386 NZ_AAOS02000012.1 Protein Homology CDS 29977 30960 . - 0 ID=cds-WP_002210589.1;Parent=gene-YPIP275_RS12505;Dbxref=GenBank:WP_002210589.1;Name=WP_002210589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192465.1;locus_tag=YPIP275_RS12505;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_002210589.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 31368 33071 . + . ID=gene-YPIP275_RS12510;Name=YPIP275_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12510;old_locus_tag=YPIP275_1387 NZ_AAOS02000012.1 Protein Homology CDS 31368 33071 . + 0 ID=cds-WP_002210590.1;Parent=gene-YPIP275_RS12510;Dbxref=GenBank:WP_002210590.1;Name=WP_002210590.1;Ontology_term=GO:0019572,GO:0005524,GO:0008741;gbkey=CDS;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=L-arabinose catabolic process|0019572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210590.1;locus_tag=YPIP275_RS12510;product=ribulokinase;protein_id=WP_002210590.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 33155 34657 . + . ID=gene-YPIP275_RS12515;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=YPIP275_RS12515;old_locus_tag=YPIP275_1388 NZ_AAOS02000012.1 Protein Homology CDS 33155 34657 . + 0 ID=cds-WP_002210591.1;Parent=gene-YPIP275_RS12515;Dbxref=GenBank:WP_002210591.1;Name=WP_002210591.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105092.1;locus_tag=YPIP275_RS12515;product=L-arabinose isomerase;protein_id=WP_002210591.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 34847 36985 . - . ID=gene-YPIP275_RS12520;Name=YPIP275_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12520;old_locus_tag=YPIP275_1390 NZ_AAOS02000012.1 Protein Homology CDS 34847 36985 . - 0 ID=cds-WP_002210593.1;Parent=gene-YPIP275_RS12520;Dbxref=GenBank:WP_002210593.1;Name=WP_002210593.1;Ontology_term=GO:0030253,GO:0005524,GO:0016020,GO:0030256;gbkey=CDS;go_component=membrane|0016020||IEA,type I protein secretion system complex|0030256||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210593.1;locus_tag=YPIP275_RS12520;product=type I secretion system permease/ATPase;protein_id=WP_002210593.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 36987 37355 . - . ID=gene-YPIP275_RS12525;Name=YPIP275_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12525 NZ_AAOS02000012.1 Protein Homology CDS 36987 37355 . - 0 ID=cds-WP_002215882.1;Parent=gene-YPIP275_RS12525;Dbxref=GenBank:WP_002215882.1;Name=WP_002215882.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052859.1;locus_tag=YPIP275_RS12525;product=beta-barrel domain-containing protein;protein_id=WP_002215882.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 37355 38356 . - . ID=gene-YPIP275_RS12530;Name=YPIP275_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12530;old_locus_tag=YPIP275_1391 NZ_AAOS02000012.1 Protein Homology CDS 37355 38356 . - 0 ID=cds-WP_002215881.1;Parent=gene-YPIP275_RS12530;Dbxref=GenBank:WP_002215881.1;Name=WP_002215881.1;Ontology_term=GO:0015031,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683610.1;locus_tag=YPIP275_RS12530;product=HlyD family secretion protein;protein_id=WP_002215881.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 38381 38602 . - . ID=gene-YPIP275_RS28720;Name=YPIP275_RS28720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28720 NZ_AAOS02000012.1 Protein Homology CDS 38381 38602 . - 0 ID=cds-WP_002215880.1;Parent=gene-YPIP275_RS28720;Dbxref=GenBank:WP_002215880.1;Name=WP_002215880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215880.1;locus_tag=YPIP275_RS28720;product=hypothetical protein;protein_id=WP_002215880.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 38655 40439 . - . ID=gene-YPIP275_RS12540;Name=YPIP275_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12540;old_locus_tag=YPIP275_1392 NZ_AAOS02000012.1 Protein Homology CDS 38655 40439 . - 0 ID=cds-WP_002215879.1;Parent=gene-YPIP275_RS12540;Dbxref=GenBank:WP_002215879.1;Name=WP_002215879.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215879.1;locus_tag=YPIP275_RS12540;product=peptidase domain-containing ABC transporter;protein_id=WP_002215879.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 40914 41357 . + . ID=gene-YPIP275_RS12545;Name=YPIP275_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12545;old_locus_tag=YPIP275_1393 NZ_AAOS02000012.1 Protein Homology CDS 40914 41357 . + 0 ID=cds-WP_002210594.1;Parent=gene-YPIP275_RS12545;Dbxref=GenBank:WP_002210594.1;Name=WP_002210594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210594.1;locus_tag=YPIP275_RS12545;product=DUF2569 domain-containing protein;protein_id=WP_002210594.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 41485 42066 . + . ID=gene-YPIP275_RS12550;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=YPIP275_RS12550;old_locus_tag=YPIP275_1394 NZ_AAOS02000012.1 Protein Homology CDS 41485 42066 . + 0 ID=cds-WP_002210595.1;Parent=gene-YPIP275_RS12550;Dbxref=GenBank:WP_002210595.1;Name=WP_002210595.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845872.1;locus_tag=YPIP275_RS12550;product=electron transport complex subunit RsxA;protein_id=WP_002210595.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 42066 42632 . + . ID=gene-YPIP275_RS12555;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=YPIP275_RS12555;old_locus_tag=YPIP275_1395 NZ_AAOS02000012.1 Protein Homology CDS 42066 42632 . + 0 ID=cds-WP_002210596.1;Parent=gene-YPIP275_RS12555;Dbxref=GenBank:WP_002210596.1;Name=WP_002210596.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210596.1;locus_tag=YPIP275_RS12555;product=electron transport complex subunit RsxB;protein_id=WP_002210596.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 42682 44544 . + . ID=gene-YPIP275_RS12560;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=YPIP275_RS12560;old_locus_tag=YPIP275_1396 NZ_AAOS02000012.1 Protein Homology CDS 42682 44544 . + 0 ID=cds-WP_002210597.1;Parent=gene-YPIP275_RS12560;Dbxref=GenBank:WP_002210597.1;Name=WP_002210597.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210597.1;locus_tag=YPIP275_RS12560;product=electron transport complex subunit RsxC;protein_id=WP_002210597.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 44649 45542 . - . ID=gene-YPIP275_RS12565;Name=YPIP275_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12565;old_locus_tag=YPIP275_1397 NZ_AAOS02000012.1 Protein Homology CDS 44649 45542 . - 0 ID=cds-WP_002210598.1;Parent=gene-YPIP275_RS12565;Dbxref=GenBank:WP_002210598.1;Name=WP_002210598.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210598.1;locus_tag=YPIP275_RS12565;product=helix-turn-helix domain-containing protein;protein_id=WP_002210598.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 46031 47125 . + . ID=gene-YPIP275_RS12570;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=YPIP275_RS12570;old_locus_tag=YPIP275_1398 NZ_AAOS02000012.1 Protein Homology CDS 46031 47125 . + 0 ID=cds-WP_002210599.1;Parent=gene-YPIP275_RS12570;Dbxref=GenBank:WP_002210599.1;Name=WP_002210599.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210599.1;locus_tag=YPIP275_RS12570;product=electron transport complex subunit RsxD;protein_id=WP_002210599.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 47135 47764 . + . ID=gene-YPIP275_RS12575;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=YPIP275_RS12575;old_locus_tag=YPIP275_1399 NZ_AAOS02000012.1 Protein Homology CDS 47135 47764 . + 0 ID=cds-WP_002210600.1;Parent=gene-YPIP275_RS12575;Dbxref=GenBank:WP_002210600.1;Name=WP_002210600.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105098.1;locus_tag=YPIP275_RS12575;product=electron transport complex subunit RsxG;protein_id=WP_002210600.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 47761 48462 . + . ID=gene-YPIP275_RS12580;Name=YPIP275_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12580;old_locus_tag=YPIP275_1400 NZ_AAOS02000012.1 Protein Homology CDS 47761 48462 . + 0 ID=cds-WP_002210601.1;Parent=gene-YPIP275_RS12580;Dbxref=GenBank:WP_002210601.1;Name=WP_002210601.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079469.1;locus_tag=YPIP275_RS12580;product=electron transport complex subunit E;protein_id=WP_002210601.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 48459 49100 . + . ID=gene-YPIP275_RS12585;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=YPIP275_RS12585;old_locus_tag=YPIP275_1401 NZ_AAOS02000012.1 Protein Homology CDS 48459 49100 . + 0 ID=cds-WP_002210602.1;Parent=gene-YPIP275_RS12585;Dbxref=GenBank:WP_002210602.1;Name=WP_002210602.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004712105.1;locus_tag=YPIP275_RS12585;product=endonuclease III;protein_id=WP_002210602.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 49283 50281 . - . ID=gene-YPIP275_RS12590;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=YPIP275_RS12590;old_locus_tag=YPIP275_1402 NZ_AAOS02000012.1 Protein Homology CDS 49283 50281 . - 0 ID=cds-WP_002210603.1;Parent=gene-YPIP275_RS12590;Dbxref=GenBank:WP_002210603.1;Name=WP_002210603.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304078.1;locus_tag=YPIP275_RS12590;product=D-erythronate dehydrogenase;protein_id=WP_002210603.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 50319 51629 . - . ID=gene-YPIP275_RS12595;Name=YPIP275_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12595;old_locus_tag=YPIP275_1403 NZ_AAOS02000012.1 Protein Homology CDS 50319 51629 . - 0 ID=cds-WP_002210604.1;Parent=gene-YPIP275_RS12595;Dbxref=GenBank:WP_002210604.1;Name=WP_002210604.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192453.1;locus_tag=YPIP275_RS12595;product=MFS transporter;protein_id=WP_002210604.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 52278 54212 . + . ID=gene-YPIP275_RS12600;Name=YPIP275_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12600;old_locus_tag=YPIP275_1404 NZ_AAOS02000012.1 Protein Homology CDS 52278 54212 . + 0 ID=cds-WP_002210605.1;Parent=gene-YPIP275_RS12600;Dbxref=GenBank:WP_002210605.1;Name=WP_002210605.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015840571.1;locus_tag=YPIP275_RS12600;product=exoribonuclease II;protein_id=WP_002210605.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 54562 56628 . + . ID=gene-YPIP275_RS12605;Name=YPIP275_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12605;old_locus_tag=YPIP275_1405 NZ_AAOS02000012.1 Protein Homology CDS 54562 56628 . + 0 ID=cds-WP_002210606.1;Parent=gene-YPIP275_RS12605;Dbxref=GenBank:WP_002210606.1;Name=WP_002210606.1;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192451.1;locus_tag=YPIP275_RS12605;product=carbon starvation CstA family protein;protein_id=WP_002210606.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 56621 56926 . + . ID=gene-YPIP275_RS12610;Name=YPIP275_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12610;old_locus_tag=YPIP275_1406 NZ_AAOS02000012.1 Protein Homology CDS 56621 56926 . + 0 ID=cds-WP_002210607.1;Parent=gene-YPIP275_RS12610;Dbxref=GenBank:WP_002210607.1;Name=WP_002210607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210607.1;locus_tag=YPIP275_RS12610;product=YbdD/YjiX family protein;protein_id=WP_002210607.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 57043 57708 . - . ID=gene-YPIP275_RS12615;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=YPIP275_RS12615;old_locus_tag=YPIP275_1407 NZ_AAOS02000012.1 Protein Homology CDS 57043 57708 . - 0 ID=cds-WP_002215192.1;Parent=gene-YPIP275_RS12615;Dbxref=GenBank:WP_002215192.1;Name=WP_002215192.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215192.1;locus_tag=YPIP275_RS12615;product=fructose-6-phosphate aldolase;protein_id=WP_002215192.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 58042 58290 . + . ID=gene-YPIP275_RS12620;Name=YPIP275_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12620;old_locus_tag=YPIP275_1408 NZ_AAOS02000012.1 Protein Homology CDS 58042 58290 . + 0 ID=cds-WP_002210609.1;Parent=gene-YPIP275_RS12620;Dbxref=GenBank:WP_002210609.1;Name=WP_002210609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699244.1;locus_tag=YPIP275_RS12620;product=DUF2164 domain-containing protein;protein_id=WP_002210609.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 58319 59014 . - . ID=gene-YPIP275_RS12625;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=YPIP275_RS12625;old_locus_tag=YPIP275_1409 NZ_AAOS02000012.1 Protein Homology CDS 58319 59014 . - 0 ID=cds-WP_002210610.1;Parent=gene-YPIP275_RS12625;Dbxref=GenBank:WP_002210610.1;Name=WP_002210610.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083158.1;locus_tag=YPIP275_RS12625;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002210610.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 59494 59709 . + . ID=gene-YPIP275_RS12630;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=YPIP275_RS12630;old_locus_tag=YPIP275_1410 NZ_AAOS02000012.1 Protein Homology CDS 59494 59709 . + 0 ID=cds-WP_002210611.1;Parent=gene-YPIP275_RS12630;Dbxref=GenBank:WP_002210611.1;Name=WP_002210611.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210611.1;locus_tag=YPIP275_RS12630;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_002210611.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 59947 60273 . - . ID=gene-YPIP275_RS12635;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=YPIP275_RS12635;old_locus_tag=YPIP275_1411 NZ_AAOS02000012.1 Protein Homology CDS 59947 60273 . - 0 ID=cds-WP_002210612.1;Parent=gene-YPIP275_RS12635;Dbxref=GenBank:WP_002210612.1;Name=WP_002210612.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070492.1;locus_tag=YPIP275_RS12635;product=stress response translation initiation inhibitor YciH;protein_id=WP_002210612.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 60273 61010 . - . ID=gene-YPIP275_RS12640;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=YPIP275_RS12640;old_locus_tag=YPIP275_1412 NZ_AAOS02000012.1 Protein Homology CDS 60273 61010 . - 0 ID=cds-WP_002210613.1;Parent=gene-YPIP275_RS12640;Dbxref=GenBank:WP_002210613.1;Name=WP_002210613.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192450.1;locus_tag=YPIP275_RS12640;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_002210613.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 61480 61779 . + . ID=gene-YPIP275_RS12645;Name=YPIP275_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12645;old_locus_tag=YPIP275_1413 NZ_AAOS02000012.1 Protein Homology CDS 61480 61779 . + 0 ID=cds-WP_002210614.1;Parent=gene-YPIP275_RS12645;Dbxref=GenBank:WP_002210614.1;Name=WP_002210614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210614.1;locus_tag=YPIP275_RS12645;product=hypothetical protein;protein_id=WP_002210614.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 61901 63070 . - . ID=gene-YPIP275_RS12650;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=YPIP275_RS12650;old_locus_tag=YPIP275_1414 NZ_AAOS02000012.1 Protein Homology CDS 61901 63070 . - 0 ID=cds-WP_002210615.1;Parent=gene-YPIP275_RS12650;Dbxref=GenBank:WP_002210615.1;Name=WP_002210615.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210615.1;locus_tag=YPIP275_RS12650;product=lipopolysaccharide assembly protein LapB;protein_id=WP_002210615.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 63077 63388 . - . ID=gene-YPIP275_RS12655;Name=YPIP275_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12655;old_locus_tag=YPIP275_1415 NZ_AAOS02000012.1 Protein Homology CDS 63077 63388 . - 0 ID=cds-WP_002210616.1;Parent=gene-YPIP275_RS12655;Dbxref=GenBank:WP_002210616.1;Name=WP_002210616.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210616.1;locus_tag=YPIP275_RS12655;product=LapA family protein;protein_id=WP_002210616.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 63557 64318 . - . ID=gene-YPIP275_RS12660;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=YPIP275_RS12660;old_locus_tag=YPIP275_1416 NZ_AAOS02000012.1 Protein Homology CDS 63557 64318 . - 0 ID=cds-WP_002210617.1;Parent=gene-YPIP275_RS12660;Dbxref=GenBank:WP_002210617.1;Name=WP_002210617.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210617.1;locus_tag=YPIP275_RS12660;product=phosphatidylglycerophosphatase B;protein_id=WP_002210617.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 64824 65414 . + . ID=gene-YPIP275_RS12665;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=YPIP275_RS12665;old_locus_tag=YPIP275_1417 NZ_AAOS02000012.1 Protein Homology CDS 64824 65414 . + 0 ID=cds-WP_002227926.1;Parent=gene-YPIP275_RS12665;Dbxref=GenBank:WP_002227926.1;Name=WP_002227926.1;Ontology_term=GO:0009231,GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227926.1;locus_tag=YPIP275_RS12665;product=GTP cyclohydrolase II;protein_id=WP_002227926.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 65578 68250 . - . ID=gene-YPIP275_RS12670;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=YPIP275_RS12670;old_locus_tag=YPIP275_1418 NZ_AAOS02000012.1 Protein Homology CDS 65578 68250 . - 0 ID=cds-WP_002215187.1;Parent=gene-YPIP275_RS12670;Dbxref=GenBank:WP_002215187.1;Name=WP_002215187.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169930.1;locus_tag=YPIP275_RS12670;product=aconitate hydratase AcnA;protein_id=WP_002215187.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 68614 69471 . - . ID=gene-YPIP275_RS12675;Name=YPIP275_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12675;old_locus_tag=YPIP275_1419 NZ_AAOS02000012.1 Protein Homology CDS 68614 69471 . - 0 ID=cds-WP_002210620.1;Parent=gene-YPIP275_RS12675;Dbxref=GenBank:WP_002210620.1;Name=WP_002210620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192447.1;locus_tag=YPIP275_RS12675;product=hypothetical protein;protein_id=WP_002210620.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 69807 70781 . - . ID=gene-YPIP275_RS12680;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=YPIP275_RS12680;old_locus_tag=YPIP275_1420 NZ_AAOS02000012.1 Protein Homology CDS 69807 70781 . - 0 ID=cds-WP_002210621.1;Parent=gene-YPIP275_RS12680;Dbxref=GenBank:WP_002210621.1;Name=WP_002210621.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=YPIP275_RS12680;product=HTH-type transcriptional regulator CysB;protein_id=WP_002210621.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 71178 73793 . - . ID=gene-YPIP275_RS12685;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=YPIP275_RS12685;old_locus_tag=YPIP275_1421 NZ_AAOS02000012.1 Protein Homology CDS 71178 73793 . - 0 ID=cds-WP_002210622.1;Parent=gene-YPIP275_RS12685;Dbxref=GenBank:WP_002210622.1;Name=WP_002210622.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191581.1;locus_tag=YPIP275_RS12685;product=type I DNA topoisomerase;protein_id=WP_002210622.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 73820 74119 . - . ID=gene-YPIP275_RS12690;Name=YPIP275_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12690 NZ_AAOS02000012.1 Protein Homology CDS 73820 74119 . - 0 ID=cds-WP_002228458.1;Parent=gene-YPIP275_RS12690;Dbxref=GenBank:WP_002228458.1;Name=WP_002228458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228458.1;locus_tag=YPIP275_RS12690;product=hypothetical protein;protein_id=WP_002228458.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 74212 74463 . + . ID=gene-YPIP275_RS12695;Name=YPIP275_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12695;old_locus_tag=YPIP275_1422 NZ_AAOS02000012.1 Protein Homology CDS 74212 74463 . + 0 ID=cds-WP_002210623.1;Parent=gene-YPIP275_RS12695;Dbxref=GenBank:WP_002210623.1;Name=WP_002210623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105106.1;locus_tag=YPIP275_RS12695;product=YciN family protein;protein_id=WP_002210623.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 74582 75628 . - . ID=gene-YPIP275_RS12700;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=YPIP275_RS12700;old_locus_tag=YPIP275_1423 NZ_AAOS02000012.1 Protein Homology CDS 74582 75628 . - 0 ID=cds-WP_002210624.1;Parent=gene-YPIP275_RS12700;Dbxref=GenBank:WP_002210624.1;Name=WP_002210624.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699213.1;locus_tag=YPIP275_RS12700;product=protease SohB;protein_id=WP_002210624.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 75800 76561 . + . ID=gene-YPIP275_RS12705;Name=YPIP275_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12705;old_locus_tag=YPIP275_1424 NZ_AAOS02000012.1 Protein Homology CDS 75800 76561 . + 0 ID=cds-WP_002210625.1;Parent=gene-YPIP275_RS12705;Dbxref=GenBank:WP_002210625.1;Name=WP_002210625.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005164229.1;locus_tag=YPIP275_RS12705;product=YciK family oxidoreductase;protein_id=WP_002210625.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 76578 77168 . + . ID=gene-YPIP275_RS12710;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=YPIP275_RS12710;old_locus_tag=YPIP275_1425 NZ_AAOS02000012.1 Protein Homology CDS 76578 77168 . + 0 ID=cds-WP_002210626.1;Parent=gene-YPIP275_RS12710;Dbxref=GenBank:WP_002210626.1;Name=WP_002210626.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079496.1;locus_tag=YPIP275_RS12710;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_002210626.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 77291 78325 . - . ID=gene-YPIP275_RS12715;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=YPIP275_RS12715;old_locus_tag=YPIP275_1426 NZ_AAOS02000012.1 Protein Homology CDS 77291 78325 . - 0 ID=cds-WP_002210627.1;Parent=gene-YPIP275_RS12715;Dbxref=GenBank:WP_002210627.1;Name=WP_002210627.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210627.1;locus_tag=YPIP275_RS12715;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_002210627.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 78672 79292 . - . ID=gene-YPIP275_RS12720;Name=YPIP275_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12720;old_locus_tag=YPIP275_1427 NZ_AAOS02000012.1 Protein Homology CDS 78672 79292 . - 0 ID=cds-WP_002210628.1;Parent=gene-YPIP275_RS12720;Dbxref=GenBank:WP_002210628.1;Name=WP_002210628.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase activity|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390873.1;locus_tag=YPIP275_RS12720;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_002210628.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 79309 80244 . - . ID=gene-YPIP275_RS12725;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=YPIP275_RS12725;old_locus_tag=YPIP275_1428 NZ_AAOS02000012.1 Protein Homology CDS 79309 80244 . - 0 ID=cds-WP_002210629.1;Parent=gene-YPIP275_RS12725;Dbxref=GenBank:WP_002210629.1;Name=WP_002210629.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210629.1;locus_tag=YPIP275_RS12725;product=RNase RNM;protein_id=WP_002210629.1;transl_table=11 NZ_AAOS02000012.1 cmsearch sequence_feature 80506 80607 . + . ID=id-NZ_AAOS02000012.1:80506..80607;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_AAOS02000012.1 RefSeq gene 80663 82225 . + . ID=gene-YPIP275_RS12740;Name=YPIP275_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12740;old_locus_tag=YPIP275_1430 NZ_AAOS02000012.1 Protein Homology CDS 80663 82225 . + 0 ID=cds-WP_002228454.1;Parent=gene-YPIP275_RS12740;Dbxref=GenBank:WP_002228454.1;Name=WP_002228454.1;Ontology_term=GO:0009058,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228454.1;locus_tag=YPIP275_RS12740;product=anthranilate synthase component 1;protein_id=WP_002228454.1;transl_table=11 NZ_AAOS02000012.1 RefSeq pseudogene 82225 83816 . + . ID=gene-YPIP275_RS28730;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=pseudogene;locus_tag=YPIP275_RS28730;pseudo=true NZ_AAOS02000012.1 Protein Homology CDS 82225 83816 . + 0 ID=cds-YPIP275_RS28730;Parent=gene-YPIP275_RS28730;Note=frameshifted;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415779.1;locus_tag=YPIP275_RS28730;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;pseudo=true;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 83820 85247 . + . ID=gene-YPIP275_RS12755;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=YPIP275_RS12755;old_locus_tag=YPIP275_1433 NZ_AAOS02000012.1 Protein Homology CDS 83820 85247 . + 0 ID=cds-WP_002210632.1;Parent=gene-YPIP275_RS12755;Dbxref=GenBank:WP_002210632.1;Name=WP_002210632.1;Ontology_term=GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210632.1;locus_tag=YPIP275_RS12755;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_002210632.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 85404 86594 . + . ID=gene-YPIP275_RS12760;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=YPIP275_RS12760;old_locus_tag=YPIP275_1434 NZ_AAOS02000012.1 Protein Homology CDS 85404 86594 . + 0 ID=cds-WP_002210633.1;Parent=gene-YPIP275_RS12760;Dbxref=GenBank:WP_002210633.1;Name=WP_002210633.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083174.1;locus_tag=YPIP275_RS12760;product=tryptophan synthase subunit beta;protein_id=WP_002210633.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 86594 87400 . + . ID=gene-YPIP275_RS12765;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS12765;old_locus_tag=YPIP275_1435 NZ_AAOS02000012.1 Protein Homology CDS 86594 87400 . + 0 ID=cds-WP_002210634.1;Parent=gene-YPIP275_RS12765;Dbxref=GenBank:WP_002210634.1;Name=WP_002210634.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079505.1;locus_tag=YPIP275_RS12765;product=tryptophan synthase subunit alpha;protein_id=WP_002210634.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 87743 88057 . + . ID=gene-YPIP275_RS12770;Name=YPIP275_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12770;old_locus_tag=YPIP275_1437 NZ_AAOS02000012.1 Protein Homology CDS 87743 88057 . + 0 ID=cds-WP_002210636.1;Parent=gene-YPIP275_RS12770;Dbxref=GenBank:WP_002210636.1;Name=WP_002210636.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210636.1;locus_tag=YPIP275_RS12770;product=BON domain-containing protein;protein_id=WP_002210636.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 88204 88839 . - . ID=gene-YPIP275_RS12775;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=YPIP275_RS12775;old_locus_tag=YPIP275_1438 NZ_AAOS02000012.1 Protein Homology CDS 88204 88839 . - 0 ID=cds-WP_002210637.1;Parent=gene-YPIP275_RS12775;Dbxref=GenBank:WP_002210637.1;Name=WP_002210637.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192441.1;locus_tag=YPIP275_RS12775;product=outer membrane protein OmpW;protein_id=WP_002210637.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 88948 89163 . - . ID=gene-YPIP275_RS12780;Name=YPIP275_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12780;old_locus_tag=YPIP275_1439 NZ_AAOS02000012.1 Protein Homology CDS 88948 89163 . - 0 ID=cds-WP_002210638.1;Parent=gene-YPIP275_RS12780;Dbxref=GenBank:WP_002210638.1;Name=WP_002210638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210638.1;locus_tag=YPIP275_RS12780;product=hypothetical protein;protein_id=WP_002210638.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 89325 90095 . + . ID=gene-YPIP275_RS12785;Name=YPIP275_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12785;old_locus_tag=YPIP275_1440 NZ_AAOS02000012.1 Protein Homology CDS 89325 90095 . + 0 ID=cds-WP_002210639.1;Parent=gene-YPIP275_RS12785;Dbxref=GenBank:WP_002210639.1;Name=WP_002210639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210639.1;locus_tag=YPIP275_RS12785;product=YciC family protein;protein_id=WP_002210639.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 90216 90836 . - . ID=gene-YPIP275_RS12790;Name=YPIP275_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12790 NZ_AAOS02000012.1 Protein Homology CDS 90216 90836 . - 0 ID=cds-WP_002215979.1;Parent=gene-YPIP275_RS12790;Dbxref=GenBank:WP_002215979.1;Name=WP_002215979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215979.1;locus_tag=YPIP275_RS12790;product=STAS domain-containing protein;protein_id=WP_002215979.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 90868 91950 . - . ID=gene-YPIP275_RS12795;Name=YPIP275_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12795 NZ_AAOS02000012.1 Protein Homology CDS 90868 91950 . - 0 ID=cds-WP_002215978.1;Parent=gene-YPIP275_RS12795;Dbxref=GenBank:WP_002215978.1;Name=WP_002215978.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215978.1;locus_tag=YPIP275_RS12795;product=SulP family inorganic anion transporter;protein_id=WP_002215978.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 92181 92723 . + . ID=gene-YPIP275_RS12800;Name=YPIP275_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12800;old_locus_tag=YPIP275_1442 NZ_AAOS02000012.1 Protein Homology CDS 92181 92723 . + 0 ID=cds-WP_002210640.1;Parent=gene-YPIP275_RS12800;Dbxref=GenBank:WP_002210640.1;Name=WP_002210640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210640.1;locus_tag=YPIP275_RS12800;product=septation protein A;protein_id=WP_002210640.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 92803 93252 . + . ID=gene-YPIP275_RS12805;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=YPIP275_RS12805;old_locus_tag=YPIP275_1443 NZ_AAOS02000012.1 Protein Homology CDS 92803 93252 . + 0 ID=cds-WP_002210641.1;Parent=gene-YPIP275_RS12805;Dbxref=GenBank:WP_002210641.1;Name=WP_002210641.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875179.1;locus_tag=YPIP275_RS12805;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_002210641.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 93400 94608 . + . ID=gene-YPIP275_RS12810;Name=YPIP275_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12810;old_locus_tag=YPIP275_1444 NZ_AAOS02000012.1 Protein Homology CDS 93400 94608 . + 0 ID=cds-WP_002209743.1-17;Parent=gene-YPIP275_RS12810;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS12810;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 94644 95402 . - . ID=gene-YPIP275_RS12815;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=YPIP275_RS12815;old_locus_tag=YPIP275_1445 NZ_AAOS02000012.1 Protein Homology CDS 94644 95402 . - 0 ID=cds-WP_002210642.1;Parent=gene-YPIP275_RS12815;Dbxref=GenBank:WP_002210642.1;Name=WP_002210642.1;gbkey=CDS;gene=tonB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210642.1;locus_tag=YPIP275_RS12815;product=TonB system transport protein TonB;protein_id=WP_002210642.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 95703 95999 . + . ID=gene-YPIP275_RS12820;Name=YPIP275_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12820;old_locus_tag=YPIP275_1446 NZ_AAOS02000012.1 Protein Homology CDS 95703 95999 . + 0 ID=cds-WP_002210643.1;Parent=gene-YPIP275_RS12820;Dbxref=GenBank:WP_002210643.1;Name=WP_002210643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210643.1;locus_tag=YPIP275_RS12820;product=YciI family protein;protein_id=WP_002210643.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 96222 96467 . + . ID=gene-YPIP275_RS12825;Name=YPIP275_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12825;old_locus_tag=YPIP275_1447 NZ_AAOS02000012.1 Protein Homology CDS 96222 96467 . + 0 ID=cds-WP_002217646.1;Parent=gene-YPIP275_RS12825;Dbxref=GenBank:WP_002217646.1;Name=WP_002217646.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217646.1;locus_tag=YPIP275_RS12825;product=TFIIB-type zinc ribbon-containing protein;protein_id=WP_002217646.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 96583 96846 . - . ID=gene-YPIP275_RS12830;Name=YPIP275_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12830;old_locus_tag=YPIP275_1448 NZ_AAOS02000012.1 Protein Homology CDS 96583 96846 . - 0 ID=cds-WP_002210644.1;Parent=gene-YPIP275_RS12830;Dbxref=GenBank:WP_002210644.1;Name=WP_002210644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210644.1;locus_tag=YPIP275_RS12830;product=hypothetical protein;protein_id=WP_002210644.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 97067 97606 . - . ID=gene-YPIP275_RS12835;Name=YPIP275_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12835;old_locus_tag=YPIP275_1450 NZ_AAOS02000012.1 Protein Homology CDS 97067 97606 . - 0 ID=cds-WP_002210646.1;Parent=gene-YPIP275_RS12835;Dbxref=GenBank:WP_002210646.1;Name=WP_002210646.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210646.1;locus_tag=YPIP275_RS12835;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_002210646.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 98035 98211 . - . ID=gene-YPIP275_RS27400;Name=YPIP275_RS27400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27400;old_locus_tag=YPIP275_1451 NZ_AAOS02000012.1 Protein Homology CDS 98035 98211 . - 0 ID=cds-WP_002388651.1;Parent=gene-YPIP275_RS27400;Dbxref=GenBank:WP_002388651.1;Name=WP_002388651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012769897.1;locus_tag=YPIP275_RS27400;product=YciY family protein;protein_id=WP_002388651.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 98443 98553 . + . ID=gene-YPIP275_RS28735;Name=YPIP275_RS28735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28735 NZ_AAOS02000012.1 Protein Homology CDS 98443 98553 . + 0 ID=cds-WP_190947803.1;Parent=gene-YPIP275_RS28735;Dbxref=GenBank:WP_190947803.1;Name=WP_190947803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264692.1;locus_tag=YPIP275_RS28735;product=gluconate 5-dehydrogenase;protein_id=WP_190947803.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 98653 100113 . + . ID=gene-YPIP275_RS12840;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=YPIP275_RS12840;old_locus_tag=YPIP275_1452 NZ_AAOS02000012.1 Protein Homology CDS 98653 100113 . + 0 ID=cds-WP_002210648.1;Parent=gene-YPIP275_RS12840;Dbxref=GenBank:WP_002210648.1;Name=WP_002210648.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=YPIP275_RS12840;product=cardiolipin synthase;protein_id=WP_002210648.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 100278 100601 . + . ID=gene-YPIP275_RS12845;Name=YPIP275_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12845;old_locus_tag=YPIP275_1453 NZ_AAOS02000012.1 Protein Homology CDS 100278 100601 . + 0 ID=cds-WP_002210649.1;Parent=gene-YPIP275_RS12845;Dbxref=GenBank:WP_002210649.1;Name=WP_002210649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210649.1;locus_tag=YPIP275_RS12845;product=HI1450 family dsDNA-mimic protein;protein_id=WP_002210649.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 100900 101115 . - . ID=gene-YPIP275_RS12850;Name=YPIP275_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12850;old_locus_tag=YPIP275_1454 NZ_AAOS02000012.1 Protein Homology CDS 100900 101115 . - 0 ID=cds-WP_002210650.1;Parent=gene-YPIP275_RS12850;Dbxref=GenBank:WP_002210650.1;Name=WP_002210650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210650.1;locus_tag=YPIP275_RS12850;product=hypothetical protein;protein_id=WP_002210650.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 101676 102677 . - . ID=gene-YPIP275_RS12860;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=YPIP275_RS12860;old_locus_tag=YPIP275_1455 NZ_AAOS02000012.1 Protein Homology CDS 101676 102677 . - 0 ID=cds-WP_002210651.1;Parent=gene-YPIP275_RS12860;Dbxref=GenBank:WP_002210651.1;Name=WP_002210651.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;gene=oppF;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227487.1;locus_tag=YPIP275_RS12860;product=murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF;protein_id=WP_002210651.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 102674 103675 . - . ID=gene-YPIP275_RS12865;Name=YPIP275_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12865;old_locus_tag=YPIP275_1456 NZ_AAOS02000012.1 Protein Homology CDS 102674 103675 . - 0 ID=cds-WP_002210652.1;Parent=gene-YPIP275_RS12865;Dbxref=GenBank:WP_002210652.1;Name=WP_002210652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105111.1;locus_tag=YPIP275_RS12865;product=ABC transporter ATP-binding protein;protein_id=WP_002210652.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 103687 104595 . - . ID=gene-YPIP275_RS12870;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=YPIP275_RS12870;old_locus_tag=YPIP275_1457 NZ_AAOS02000012.1 Protein Homology CDS 103687 104595 . - 0 ID=cds-WP_025470761.1;Parent=gene-YPIP275_RS12870;Dbxref=GenBank:WP_025470761.1;Name=WP_025470761.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=YPIP275_RS12870;product=oligopeptide ABC transporter permease OppC;protein_id=WP_025470761.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 104611 105531 . - . ID=gene-YPIP275_RS12875;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=YPIP275_RS12875;old_locus_tag=YPIP275_1458 NZ_AAOS02000012.1 Protein Homology CDS 104611 105531 . - 0 ID=cds-WP_002210654.1;Parent=gene-YPIP275_RS12875;Dbxref=GenBank:WP_002210654.1;Name=WP_002210654.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=YPIP275_RS12875;product=oligopeptide ABC transporter permease OppB;protein_id=WP_002210654.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 105618 107255 . - . ID=gene-YPIP275_RS12880;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=YPIP275_RS12880;old_locus_tag=YPIP275_1459 NZ_AAOS02000012.1 Protein Homology CDS 105618 107255 . - 0 ID=cds-WP_002218177.1;Parent=gene-YPIP275_RS12880;Dbxref=GenBank:WP_002218177.1;Name=WP_002218177.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218177.1;locus_tag=YPIP275_RS12880;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_002218177.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 108093 108737 . - . ID=gene-YPIP275_RS12885;Name=YPIP275_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12885;old_locus_tag=YPIP275_1460 NZ_AAOS02000012.1 Protein Homology CDS 108093 108737 . - 0 ID=cds-WP_002210656.1;Parent=gene-YPIP275_RS12885;Dbxref=GenBank:WP_002210656.1;Name=WP_002210656.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013575947.1;locus_tag=YPIP275_RS12885;product=YchE family NAAT transporter;protein_id=WP_002210656.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 109544 112219 . + . ID=gene-YPIP275_RS12890;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=YPIP275_RS12890;old_locus_tag=YPIP275_1461 NZ_AAOS02000012.1 Protein Homology CDS 109544 112219 . + 0 ID=cds-WP_002210657.1;Parent=gene-YPIP275_RS12890;Dbxref=GenBank:WP_002210657.1;Name=WP_002210657.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002416549.1;locus_tag=YPIP275_RS12890;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_002210657.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 112759 113781 . + . ID=gene-YPIP275_RS12895;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS12895;old_locus_tag=YPIP275_1463 NZ_AAOS02000012.1 Protein Homology CDS 112759 113781 . + 0 ID=cds-WP_000255944.1-24;Parent=gene-YPIP275_RS12895;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS12895;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 113778 114560 . + . ID=gene-YPIP275_RS12900;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS12900;old_locus_tag=YPIP275_1464 NZ_AAOS02000012.1 Protein Homology CDS 113778 114560 . + 0 ID=cds-WP_001317493.1-29;Parent=gene-YPIP275_RS12900;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS12900;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 114929 115519 . - . ID=gene-YPIP275_RS12905;Name=YPIP275_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12905;old_locus_tag=YPIP275_1465 NZ_AAOS02000012.1 Protein Homology CDS 114929 115519 . - 0 ID=cds-WP_002210659.1;Parent=gene-YPIP275_RS12905;Dbxref=GenBank:WP_002210659.1;Name=WP_002210659.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210659.1;locus_tag=YPIP275_RS12905;product=thymidine kinase;protein_id=WP_002210659.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 116269 116667 . + . ID=gene-YPIP275_RS12910;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=YPIP275_RS12910;old_locus_tag=YPIP275_1467 NZ_AAOS02000012.1 Protein Homology CDS 116269 116667 . + 0 ID=cds-WP_002210661.1;Parent=gene-YPIP275_RS12910;Dbxref=GenBank:WP_002210661.1;Name=WP_002210661.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210661.1;locus_tag=YPIP275_RS12910;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_002210661.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 117102 118448 . - . ID=gene-YPIP275_RS12915;Name=YPIP275_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12915;old_locus_tag=YPIP275_1470 NZ_AAOS02000012.1 Protein Homology CDS 117102 118448 . - 0 ID=cds-WP_002210664.1;Parent=gene-YPIP275_RS12915;Dbxref=GenBank:WP_002210664.1;Name=WP_002210664.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210664.1;locus_tag=YPIP275_RS12915;product=UDP-glucose dehydrogenase family protein;protein_id=WP_002210664.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 118755 119771 . - . ID=gene-YPIP275_RS12920;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=YPIP275_RS12920;old_locus_tag=YPIP275_1471 NZ_AAOS02000012.1 Protein Homology CDS 118755 119771 . - 0 ID=cds-WP_002210665.1;Parent=gene-YPIP275_RS12920;Dbxref=GenBank:WP_002210665.1;Name=WP_002210665.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230892.1;locus_tag=YPIP275_RS12920;product=two-component system response regulator RssB;protein_id=WP_002210665.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 121105 121569 . + . ID=gene-YPIP275_RS12925;Name=YPIP275_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12925;old_locus_tag=YPIP275_1472 NZ_AAOS02000012.1 Protein Homology CDS 121105 121569 . + 0 ID=cds-WP_002210666.1;Parent=gene-YPIP275_RS12925;Dbxref=GenBank:WP_002210666.1;Name=WP_002210666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210666.1;locus_tag=YPIP275_RS12925;product=YchJ family protein;protein_id=WP_002210666.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 121653 122522 . + . ID=gene-YPIP275_RS12930;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=YPIP275_RS12930;old_locus_tag=YPIP275_1474 NZ_AAOS02000012.1 Protein Homology CDS 121653 122522 . + 0 ID=cds-WP_002210667.1;Parent=gene-YPIP275_RS12930;Dbxref=GenBank:WP_002210667.1;Name=WP_002210667.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210667.1;locus_tag=YPIP275_RS12930;product=formyltetrahydrofolate deformylase;protein_id=WP_002210667.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 122485 123693 . - . ID=gene-YPIP275_RS12935;Name=YPIP275_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12935;old_locus_tag=YPIP275_1473 NZ_AAOS02000012.1 Protein Homology CDS 122485 123693 . - 0 ID=cds-WP_002209743.1-18;Parent=gene-YPIP275_RS12935;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS12935;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 123973 124057 . + . ID=gene-YPIP275_RS12940;Name=YPIP275_RS12940;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS12940;old_locus_tag=YPIP275_1477 NZ_AAOS02000012.1 tRNAscan-SE tRNA 123973 124057 . + . ID=rna-YPIP275_RS12940;Parent=gene-YPIP275_RS12940;anticodon=(pos:124007..124009);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS12940;product=tRNA-Tyr NZ_AAOS02000012.1 tRNAscan-SE exon 123973 124057 . + . ID=exon-YPIP275_RS12940-1;Parent=rna-YPIP275_RS12940;anticodon=(pos:124007..124009);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS12940;product=tRNA-Tyr NZ_AAOS02000012.1 RefSeq gene 124207 124281 . + . ID=gene-YPIP275_RS12945;Name=YPIP275_RS12945;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS12945;old_locus_tag=YPIP275_1478 NZ_AAOS02000012.1 tRNAscan-SE tRNA 124207 124281 . + . ID=rna-YPIP275_RS12945;Parent=gene-YPIP275_RS12945;anticodon=(pos:124240..124242);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS12945;product=tRNA-Gly NZ_AAOS02000012.1 tRNAscan-SE exon 124207 124281 . + . ID=exon-YPIP275_RS12945-1;Parent=rna-YPIP275_RS12945;anticodon=(pos:124240..124242);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS12945;product=tRNA-Gly NZ_AAOS02000012.1 RefSeq gene 124288 124363 . + . ID=gene-YPIP275_RS12950;Name=YPIP275_RS12950;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS12950;old_locus_tag=YPIP275_1479 NZ_AAOS02000012.1 tRNAscan-SE tRNA 124288 124363 . + . ID=rna-YPIP275_RS12950;Parent=gene-YPIP275_RS12950;anticodon=(pos:124321..124323);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS12950;product=tRNA-Thr NZ_AAOS02000012.1 tRNAscan-SE exon 124288 124363 . + . ID=exon-YPIP275_RS12950-1;Parent=rna-YPIP275_RS12950;anticodon=(pos:124321..124323);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS12950;product=tRNA-Thr NZ_AAOS02000012.1 RefSeq gene 124472 125656 . + . ID=gene-YPIP275_RS12955;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=YPIP275_RS12955;old_locus_tag=YPIP275_1480 NZ_AAOS02000012.1 Protein Homology CDS 124472 125656 . + 0 ID=cds-WP_002210669.1;Parent=gene-YPIP275_RS12955;Dbxref=GenBank:WP_002210669.1;Name=WP_002210669.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210669.1;locus_tag=YPIP275_RS12955;product=elongation factor Tu;protein_id=WP_002210669.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 125907 126290 . + . ID=gene-YPIP275_RS12960;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=YPIP275_RS12960;old_locus_tag=YPIP275_1481 NZ_AAOS02000012.1 Protein Homology CDS 125907 126290 . + 0 ID=cds-WP_002210670.1;Parent=gene-YPIP275_RS12960;Dbxref=GenBank:WP_002210670.1;Name=WP_002210670.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=YPIP275_RS12960;product=preprotein translocase subunit SecE;protein_id=WP_002210670.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 126292 126837 . + . ID=gene-YPIP275_RS12965;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=YPIP275_RS12965;old_locus_tag=YPIP275_1482 NZ_AAOS02000012.1 Protein Homology CDS 126292 126837 . + 0 ID=cds-WP_002210671.1;Parent=gene-YPIP275_RS12965;Dbxref=GenBank:WP_002210671.1;Name=WP_002210671.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953928.1;locus_tag=YPIP275_RS12965;product=transcription termination/antitermination protein NusG;protein_id=WP_002210671.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 127028 127456 . + . ID=gene-YPIP275_RS12970;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=YPIP275_RS12970;old_locus_tag=YPIP275_1483 NZ_AAOS02000012.1 Protein Homology CDS 127028 127456 . + 0 ID=cds-WP_002210672.1;Parent=gene-YPIP275_RS12970;Dbxref=GenBank:WP_002210672.1;Name=WP_002210672.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165805.1;locus_tag=YPIP275_RS12970;product=50S ribosomal protein L11;protein_id=WP_002210672.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 127460 128164 . + . ID=gene-YPIP275_RS12975;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=YPIP275_RS12975;old_locus_tag=YPIP275_1484 NZ_AAOS02000012.1 Protein Homology CDS 127460 128164 . + 0 ID=cds-WP_002210673.1;Parent=gene-YPIP275_RS12975;Dbxref=GenBank:WP_002210673.1;Name=WP_002210673.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312934.1;locus_tag=YPIP275_RS12975;product=50S ribosomal protein L1;protein_id=WP_002210673.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 128529 129026 . + . ID=gene-YPIP275_RS12980;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS12980;old_locus_tag=YPIP275_1485 NZ_AAOS02000012.1 Protein Homology CDS 128529 129026 . + 0 ID=cds-WP_002210674.1;Parent=gene-YPIP275_RS12980;Dbxref=GenBank:WP_002210674.1;Name=WP_002210674.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=YPIP275_RS12980;product=50S ribosomal protein L10;protein_id=WP_002210674.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 129093 129461 . + . ID=gene-YPIP275_RS12985;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=YPIP275_RS12985;old_locus_tag=YPIP275_1486 NZ_AAOS02000012.1 Protein Homology CDS 129093 129461 . + 0 ID=cds-WP_002210675.1;Parent=gene-YPIP275_RS12985;Dbxref=GenBank:WP_002210675.1;Name=WP_002210675.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815381.1;locus_tag=YPIP275_RS12985;product=50S ribosomal protein L7/L12;protein_id=WP_002210675.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 129804 133832 . + . ID=gene-YPIP275_RS12990;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=YPIP275_RS12990;old_locus_tag=YPIP275_1487 NZ_AAOS02000012.1 Protein Homology CDS 129804 133832 . + 0 ID=cds-WP_002210676.1;Parent=gene-YPIP275_RS12990;Dbxref=GenBank:WP_002210676.1;Name=WP_002210676.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=YPIP275_RS12990;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_002210676.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 133961 138181 . + . ID=gene-YPIP275_RS12995;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=YPIP275_RS12995;old_locus_tag=YPIP275_1488 NZ_AAOS02000012.1 Protein Homology CDS 133961 138181 . + 0 ID=cds-WP_002210677.1;Parent=gene-YPIP275_RS12995;Dbxref=GenBank:WP_002210677.1;Name=WP_002210677.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393389.1;locus_tag=YPIP275_RS12995;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_002210677.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 138308 138766 . - . ID=gene-YPIP275_RS13000;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13000;old_locus_tag=YPIP275_1489 NZ_AAOS02000012.1 Protein Homology CDS 138308 138766 . - 0 ID=cds-WP_002213775.1-21;Parent=gene-YPIP275_RS13000;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS13000;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 139198 140328 . - . ID=gene-YPIP275_RS13015;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=YPIP275_RS13015;old_locus_tag=YPIP275_1490 NZ_AAOS02000012.1 Protein Homology CDS 139198 140328 . - 0 ID=cds-WP_002210678.1;Parent=gene-YPIP275_RS13015;Dbxref=GenBank:WP_002210678.1;Name=WP_002210678.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210678.1;locus_tag=YPIP275_RS13015;product=2-iminoacetate synthase ThiH;protein_id=WP_002210678.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 140321 141136 . - . ID=gene-YPIP275_RS13020;Name=YPIP275_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13020;old_locus_tag=YPIP275_1491 NZ_AAOS02000012.1 Protein Homology CDS 140321 141136 . - 0 ID=cds-WP_002217273.1;Parent=gene-YPIP275_RS13020;Dbxref=GenBank:WP_002217273.1;Name=WP_002217273.1;Ontology_term=GO:1990107;gbkey=CDS;go_function=thiazole synthase activity|1990107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228257.1;locus_tag=YPIP275_RS13020;product=thiazole synthase;protein_id=WP_002217273.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 141138 141329 . - . ID=gene-YPIP275_RS13025;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=YPIP275_RS13025 NZ_AAOS02000012.1 Protein Homology CDS 141138 141329 . - 0 ID=cds-WP_002355316.1;Parent=gene-YPIP275_RS13025;Dbxref=GenBank:WP_002355316.1;Name=WP_002355316.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002355316.1;locus_tag=YPIP275_RS13025;product=sulfur carrier protein ThiS;protein_id=WP_002355316.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 141350 142147 . - . ID=gene-YPIP275_RS13030;Name=YPIP275_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13030;old_locus_tag=YPIP275_1492 NZ_AAOS02000012.1 Protein Homology CDS 141350 142147 . - 0 ID=cds-WP_002210680.1;Parent=gene-YPIP275_RS13030;Dbxref=GenBank:WP_002210680.1;Name=WP_002210680.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210680.1;locus_tag=YPIP275_RS13030;product=HesA/MoeB/ThiF family protein;protein_id=WP_002210680.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 142137 142811 . - . ID=gene-YPIP275_RS13035;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=YPIP275_RS13035;old_locus_tag=YPIP275_1493 NZ_AAOS02000012.1 Protein Homology CDS 142137 142811 . - 0 ID=cds-WP_002210681.1;Parent=gene-YPIP275_RS13035;Dbxref=GenBank:WP_002210681.1;Name=WP_002210681.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303440.1;locus_tag=YPIP275_RS13035;product=thiamine phosphate synthase;protein_id=WP_002210681.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 142798 144843 . - . ID=gene-YPIP275_RS13040;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=YPIP275_RS13040;old_locus_tag=YPIP275_1494 NZ_AAOS02000012.1 Protein Homology CDS 142798 144843 . - 0 ID=cds-WP_002210682.1;Parent=gene-YPIP275_RS13040;Dbxref=GenBank:WP_002210682.1;Name=WP_002210682.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229040.1;locus_tag=YPIP275_RS13040;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_002210682.1;transl_table=11 NZ_AAOS02000012.1 cmsearch riboswitch 144977 145102 . - . ID=id-NZ_AAOS02000012.1:144977..145102;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_AAOS02000012.1 RefSeq gene 145219 145728 . - . ID=gene-YPIP275_RS13050;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=YPIP275_RS13050;old_locus_tag=YPIP275_1495 NZ_AAOS02000012.1 Protein Homology CDS 145219 145728 . - 0 ID=cds-WP_002210683.1;Parent=gene-YPIP275_RS13050;Dbxref=GenBank:WP_002210683.1;Name=WP_002210683.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191553.1;locus_tag=YPIP275_RS13050;product=sigma D regulator;protein_id=WP_002210683.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 145825 146607 . + . ID=gene-YPIP275_RS13055;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=YPIP275_RS13055;old_locus_tag=YPIP275_1496 NZ_AAOS02000012.1 Protein Homology CDS 145825 146607 . + 0 ID=cds-WP_002210684.1;Parent=gene-YPIP275_RS13055;Dbxref=GenBank:WP_002210684.1;Name=WP_002210684.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191554.1;locus_tag=YPIP275_RS13055;product=NAD(+) diphosphatase;protein_id=WP_002210684.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 146700 147485 . + . ID=gene-YPIP275_RS13060;Name=YPIP275_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13060;old_locus_tag=YPIP275_1497 NZ_AAOS02000012.1 Protein Homology CDS 146700 147485 . + 0 ID=cds-WP_002210685.1;Parent=gene-YPIP275_RS13060;Dbxref=GenBank:WP_002210685.1;Name=WP_002210685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210685.1;locus_tag=YPIP275_RS13060;product=hypothetical protein;protein_id=WP_002210685.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 147604 148671 . + . ID=gene-YPIP275_RS13065;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=YPIP275_RS13065;old_locus_tag=YPIP275_1498 NZ_AAOS02000012.1 Protein Homology CDS 147604 148671 . + 0 ID=cds-WP_002210686.1;Parent=gene-YPIP275_RS13065;Dbxref=GenBank:WP_002210686.1;Name=WP_002210686.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166079.1;locus_tag=YPIP275_RS13065;product=uroporphyrinogen decarboxylase;protein_id=WP_002210686.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 148737 149441 . + . ID=gene-YPIP275_RS13070;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=YPIP275_RS13070;old_locus_tag=YPIP275_1499 NZ_AAOS02000012.1 Protein Homology CDS 148737 149441 . + 0 ID=cds-WP_002217884.1;Parent=gene-YPIP275_RS13070;Dbxref=GenBank:WP_002217884.1;Name=WP_002217884.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217884.1;locus_tag=YPIP275_RS13070;product=deoxyribonuclease V;protein_id=WP_002217884.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 149487 150077 . + . ID=gene-YPIP275_RS13075;Name=YPIP275_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13075;old_locus_tag=YPIP275_1500 NZ_AAOS02000012.1 Protein Homology CDS 149487 150077 . + 0 ID=cds-WP_002210688.1;Parent=gene-YPIP275_RS13075;Dbxref=GenBank:WP_002210688.1;Name=WP_002210688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957783.1;locus_tag=YPIP275_RS13075;product=YjaG family protein;protein_id=WP_002210688.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 150266 150541 . + . ID=gene-YPIP275_RS13080;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=YPIP275_RS13080;old_locus_tag=YPIP275_1501 NZ_AAOS02000012.1 Protein Homology CDS 150266 150541 . + 0 ID=cds-WP_002210689.1;Parent=gene-YPIP275_RS13080;Dbxref=GenBank:WP_002210689.1;Name=WP_002210689.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013200312.1;locus_tag=YPIP275_RS13080;product=nucleoid-associated protein HU-alpha;protein_id=WP_002210689.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 150591 151244 . + . ID=gene-YPIP275_RS13085;Name=YPIP275_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS13085;old_locus_tag=YPIP275_1502 NZ_AAOS02000012.1 Protein Homology CDS 150591 151244 . + 0 ID=cds-WP_002355296.1;Parent=gene-YPIP275_RS13085;Dbxref=GenBank:WP_002355296.1;Name=WP_002355296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002355296.1;locus_tag=YPIP275_RS13085;product=DUF1481 domain-containing protein;protein_id=WP_002355296.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 151392 152678 . - . ID=gene-YPIP275_RS13090;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=YPIP275_RS13090;old_locus_tag=YPIP275_1503 NZ_AAOS02000012.1 Protein Homology CDS 151392 152678 . - 0 ID=cds-WP_002210691.1;Parent=gene-YPIP275_RS13090;Dbxref=GenBank:WP_002210691.1;Name=WP_002210691.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716493.1;locus_tag=YPIP275_RS13090;product=phosphoribosylamine--glycine ligase;protein_id=WP_002210691.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 152738 154327 . - . ID=gene-YPIP275_RS13095;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=YPIP275_RS13095;old_locus_tag=YPIP275_1504 NZ_AAOS02000012.1 Protein Homology CDS 152738 154327 . - 0 ID=cds-WP_002210692.1;Parent=gene-YPIP275_RS13095;Dbxref=GenBank:WP_002210692.1;Name=WP_002210692.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=YPIP275_RS13095;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_002210692.1;transl_table=11 NZ_AAOS02000012.1 RefSeq gene 154413 154610 . - . ID=gene-YPIP275_RS28740;Name=YPIP275_RS28740;end_range=154610,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28740;partial=true NZ_AAOS02000012.1 GeneMarkS-2+ CDS 154413 154610 . - 0 ID=cds-WP_366534733.1;Parent=gene-YPIP275_RS28740;Dbxref=GenBank:WP_366534733.1;Name=WP_366534733.1;end_range=154610,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS28740;partial=true;product=hypothetical protein;protein_id=WP_366534733.1;transl_table=11 ##sequence-region NZ_AAOS02000011.1 1 196911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000011.1 RefSeq region 1 196911 . + . ID=NZ_AAOS02000011.1:1..196911;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000011.1 RefSeq gene 53 757 . - . ID=gene-YPIP275_RS11145;Name=YPIP275_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11145;old_locus_tag=YPIP275_2787 NZ_AAOS02000011.1 Protein Homology CDS 53 757 . - 0 ID=cds-WP_001067855.1-14;Parent=gene-YPIP275_RS11145;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=YPIP275_RS11145;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 769 1425 . - . ID=gene-YPIP275_RS11150;Name=tetR(D);gbkey=Gene;gene=tetR(D);gene_biotype=protein_coding;locus_tag=YPIP275_RS11150;old_locus_tag=YPIP275_2788 NZ_AAOS02000011.1 Protein Homology CDS 769 1425 . - 0 ID=cds-WP_000113282.1-3;Parent=gene-YPIP275_RS11150;Dbxref=GenBank:WP_000113282.1;Name=WP_000113282.1;gbkey=CDS;gene=tetR(D);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113282.1;locus_tag=YPIP275_RS11150;product=tetracycline resistance transcriptional repressor TetR(D);protein_id=WP_000113282.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 1521 2705 . + . ID=gene-YPIP275_RS11155;Name=tet(D);gbkey=Gene;gene=tet(D);gene_biotype=protein_coding;locus_tag=YPIP275_RS11155;old_locus_tag=YPIP275_2789 NZ_AAOS02000011.1 Protein Homology CDS 1521 2705 . + 0 ID=cds-WP_001039466.1-3;Parent=gene-YPIP275_RS11155;Dbxref=GenBank:WP_001039466.1;Name=WP_001039466.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(D);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001039466.1;locus_tag=YPIP275_RS11155;product=tetracycline efflux MFS transporter Tet(D);protein_id=WP_001039466.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 2800 3909 . + . ID=gene-YPIP275_RS11160;Name=YPIP275_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11160;old_locus_tag=YPIP275_2790 NZ_AAOS02000011.1 Protein Homology CDS 2800 3909 . + 0 ID=cds-WP_000842134.1-3;Parent=gene-YPIP275_RS11160;Dbxref=GenBank:WP_000842134.1;Name=WP_000842134.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308438.1;locus_tag=YPIP275_RS11160;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_000842134.1;transl_table=11 NZ_AAOS02000011.1 RefSeq pseudogene 3931 4353 . + . ID=gene-YPIP275_RS11165;Name=YPIP275_RS11165;end_range=4353,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS11165;old_locus_tag=YPIP275_2791;partial=true;pseudo=true NZ_AAOS02000011.1 Protein Homology CDS 3931 4353 . + 0 ID=cds-YPIP275_RS11165;Parent=gene-YPIP275_RS11165;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4353,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827456.1;locus_tag=YPIP275_RS11165;partial=true;product=alpha/beta hydrolase-fold protein;pseudo=true;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 4399 5103 . - . ID=gene-YPIP275_RS11170;Name=YPIP275_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11170;old_locus_tag=YPIP275_2792 NZ_AAOS02000011.1 Protein Homology CDS 4399 5103 . - 0 ID=cds-WP_001067855.1-15;Parent=gene-YPIP275_RS11170;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=YPIP275_RS11170;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_AAOS02000011.1 RefSeq pseudogene 5158 6045 . + . ID=gene-YPIP275_RS11175;Name=YPIP275_RS11175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS11175;old_locus_tag=YPIP275_2793;partial=true;pseudo=true;start_range=.,5158 NZ_AAOS02000011.1 Protein Homology CDS 5158 6045 . + 0 ID=cds-YPIP275_RS11175;Parent=gene-YPIP275_RS11175;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151612.1;locus_tag=YPIP275_RS11175;partial=true;product=oligosaccharide MFS transporter;pseudo=true;start_range=.,5158;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 6076 7164 . - . ID=gene-YPIP275_RS11180;Name=YPIP275_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11180;old_locus_tag=YPIP275_2794 NZ_AAOS02000011.1 Protein Homology CDS 6076 7164 . - 0 ID=cds-WP_001620097.1-3;Parent=gene-YPIP275_RS11180;Dbxref=GenBank:WP_001620097.1;Name=WP_001620097.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226824.1;locus_tag=YPIP275_RS11180;product=AAA family ATPase;protein_id=WP_001620097.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 7251 7511 . - . ID=gene-YPIP275_RS11185;Name=YPIP275_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11185;old_locus_tag=YPIP275_2795 NZ_AAOS02000011.1 Protein Homology CDS 7251 7511 . - 0 ID=cds-WP_001620096.1-3;Parent=gene-YPIP275_RS11185;Dbxref=GenBank:WP_001620096.1;Name=WP_001620096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904006.1;locus_tag=YPIP275_RS11185;product=hypothetical protein;protein_id=WP_001620096.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 7809 8669 . + . ID=gene-YPIP275_RS11190;Name=YPIP275_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11190;old_locus_tag=YPIP275_2796 NZ_AAOS02000011.1 Protein Homology CDS 7809 8669 . + 0 ID=cds-WP_001620095.1-3;Parent=gene-YPIP275_RS11190;Dbxref=GenBank:WP_001620095.1;Name=WP_001620095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001620095.1;locus_tag=YPIP275_RS11190;product=broad-spectrum class A beta-lactamase SHV-1;protein_id=WP_001620095.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 8690 9451 . - . ID=gene-YPIP275_RS11195;Name=YPIP275_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11195;old_locus_tag=YPIP275_2797 NZ_AAOS02000011.1 Protein Homology CDS 8690 9451 . - 0 ID=cds-WP_002210513.1-3;Parent=gene-YPIP275_RS11195;Dbxref=GenBank:WP_002210513.1;Name=WP_002210513.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226821.1;locus_tag=YPIP275_RS11195;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_002210513.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 9712 10614 . + . ID=gene-YPIP275_RS11200;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=YPIP275_RS11200;old_locus_tag=YPIP275_2798 NZ_AAOS02000011.1 Protein Homology CDS 9712 10614 . + 0 ID=cds-WP_002210514.1-3;Parent=gene-YPIP275_RS11200;Dbxref=GenBank:WP_002210514.1;Name=WP_002210514.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226820.1;locus_tag=YPIP275_RS11200;product=L-threonate dehydrogenase;protein_id=WP_002210514.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 10626 11891 . + . ID=gene-YPIP275_RS11205;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=YPIP275_RS11205;old_locus_tag=YPIP275_2799 NZ_AAOS02000011.1 Protein Homology CDS 10626 11891 . + 0 ID=cds-WP_002210515.1-3;Parent=gene-YPIP275_RS11205;Dbxref=GenBank:WP_002210515.1;Name=WP_002210515.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226819.1;locus_tag=YPIP275_RS11205;product=3-oxo-tetronate kinase;protein_id=WP_002210515.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 11884 12504 . + . ID=gene-YPIP275_RS11210;Name=otnC;gbkey=Gene;gene=otnC;gene_biotype=protein_coding;locus_tag=YPIP275_RS11210;old_locus_tag=YPIP275_2800 NZ_AAOS02000011.1 Protein Homology CDS 11884 12504 . + 0 ID=cds-WP_002210516.1-3;Parent=gene-YPIP275_RS11210;Dbxref=GenBank:WP_002210516.1;Name=WP_002210516.1;Ontology_term=GO:0005996,GO:0016829;gbkey=CDS;gene=otnC;go_function=lyase activity|0016829||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226818.1;locus_tag=YPIP275_RS11210;product=3-oxo-tetronate 4-phosphate decarboxylase;protein_id=WP_002210516.1;transl_table=11 NZ_AAOS02000011.1 RefSeq pseudogene 12509 13162 . + . ID=gene-YPIP275_RS11215;Name=YPIP275_RS11215;end_range=13162,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS11215;partial=true;pseudo=true NZ_AAOS02000011.1 Protein Homology CDS 12509 13162 . + 0 ID=cds-YPIP275_RS11215;Parent=gene-YPIP275_RS11215;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=13162,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226817.1;locus_tag=YPIP275_RS11215;partial=true;product=TIM barrel protein;pseudo=true;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 13216 13920 . - . ID=gene-YPIP275_RS11220;Name=YPIP275_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11220;old_locus_tag=YPIP275_2802 NZ_AAOS02000011.1 Protein Homology CDS 13216 13920 . - 0 ID=cds-WP_001067855.1-16;Parent=gene-YPIP275_RS11220;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=YPIP275_RS11220;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_AAOS02000011.1 RefSeq pseudogene 13982 14746 . - . ID=gene-YPIP275_RS11225;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=YPIP275_RS11225;old_locus_tag=YPIP275_2803;partial=true;pseudo=true;start_range=.,13982 NZ_AAOS02000011.1 Protein Homology CDS 13982 14746 . - 0 ID=cds-YPIP275_RS11225;Parent=gene-YPIP275_RS11225;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001324342.1;locus_tag=YPIP275_RS11225;partial=true;product=IS21-like element IS1326 family transposase;pseudo=true;start_range=.,13982;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 14869 16413 . + . ID=gene-YPIP275_RS11230;Name=YPIP275_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11230;old_locus_tag=YPIP275_2804 NZ_AAOS02000011.1 Protein Homology CDS 14869 16413 . + 0 ID=cds-WP_000287615.1-2;Parent=gene-YPIP275_RS11230;Dbxref=GenBank:WP_000287615.1;Name=WP_000287615.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608690.1;locus_tag=YPIP275_RS11230;product=IS3 family transposase;protein_id=WP_000287615.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 16464 17324 . - . ID=gene-YPIP275_RS11235;Name=YPIP275_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11235;old_locus_tag=YPIP275_2805 NZ_AAOS02000011.1 Protein Homology CDS 16464 17324 . - 0 ID=cds-WP_000344784.1-2;Parent=gene-YPIP275_RS11235;Dbxref=GenBank:WP_000344784.1;Name=WP_000344784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001333192.1;locus_tag=YPIP275_RS11235;product=TniB family NTP-binding protein;protein_id=WP_000344784.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 17327 19006 . - . ID=gene-YPIP275_RS11240;Name=YPIP275_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11240;old_locus_tag=YPIP275_2806 NZ_AAOS02000011.1 Protein Homology CDS 17327 19006 . - 0 ID=cds-WP_000179844.1-2;Parent=gene-YPIP275_RS11240;Dbxref=GenBank:WP_000179844.1;Name=WP_000179844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000135553.1;locus_tag=YPIP275_RS11240;product=TnsB C-terminal domain-containing protein;protein_id=WP_000179844.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 19081 19788 . - . ID=gene-YPIP275_RS11245;Name=YPIP275_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11245;old_locus_tag=YPIP275_2807 NZ_AAOS02000011.1 Protein Homology CDS 19081 19788 . - 0 ID=cds-WP_000204520.1;Parent=gene-YPIP275_RS11245;Dbxref=GenBank:WP_000204520.1;Name=WP_000204520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001705316.1;locus_tag=YPIP275_RS11245;product=EAL domain-containing protein;protein_id=WP_000204520.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 19785 20021 . - . ID=gene-YPIP275_RS11250;Name=merE;gbkey=Gene;gene=merE;gene_biotype=protein_coding;locus_tag=YPIP275_RS11250;old_locus_tag=YPIP275_2808 NZ_AAOS02000011.1 Protein Homology CDS 19785 20021 . - 0 ID=cds-WP_000993386.1-2;Parent=gene-YPIP275_RS11250;Dbxref=GenBank:WP_000993386.1;Name=WP_000993386.1;gbkey=CDS;gene=merE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102820.1;locus_tag=YPIP275_RS11250;product=broad-spectrum mercury transporter MerE;protein_id=WP_000993386.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 20018 20380 . - . ID=gene-YPIP275_RS11255;Name=merD;gbkey=Gene;gene=merD;gene_biotype=protein_coding;locus_tag=YPIP275_RS11255;old_locus_tag=YPIP275_2809 NZ_AAOS02000011.1 Protein Homology CDS 20018 20380 . - 0 ID=cds-WP_001277456.1-2;Parent=gene-YPIP275_RS11255;Dbxref=GenBank:WP_001277456.1;Name=WP_001277456.1;Ontology_term=GO:0006355,GO:0045892,GO:0046689,GO:0003677;gbkey=CDS;gene=merD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA,response to mercury ion|0046689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277466.1;locus_tag=YPIP275_RS11255;product=mercury resistance co-regulator MerD;protein_id=WP_001277456.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 20398 22092 . - . ID=gene-YPIP275_RS11260;Name=merA;gbkey=Gene;gene=merA;gene_biotype=protein_coding;locus_tag=YPIP275_RS11260;old_locus_tag=YPIP275_2810 NZ_AAOS02000011.1 Protein Homology CDS 20398 22092 . - 0 ID=cds-WP_000105636.1-2;Parent=gene-YPIP275_RS11260;Dbxref=GenBank:WP_000105636.1;Name=WP_000105636.1;Ontology_term=GO:0046689,GO:0050787,GO:0016152,GO:0045340,GO:0050660,GO:0050661;gbkey=CDS;gene=merA;go_function=mercury (II) reductase (NADP+) activity|0016152||IEA,mercury ion binding|0045340||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=response to mercury ion|0046689||IEA,detoxification of mercury ion|0050787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240396.1;locus_tag=YPIP275_RS11260;product=mercury(II) reductase;protein_id=WP_000105636.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 22144 22566 . - . ID=gene-YPIP275_RS11265;Name=merC;gbkey=Gene;gene=merC;gene_biotype=protein_coding;locus_tag=YPIP275_RS11265;old_locus_tag=YPIP275_2811 NZ_AAOS02000011.1 Protein Homology CDS 22144 22566 . - 0 ID=cds-WP_001340589.1-2;Parent=gene-YPIP275_RS11265;Dbxref=GenBank:WP_001340589.1;Name=WP_001340589.1;gbkey=CDS;gene=merC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239395.1;locus_tag=YPIP275_RS11265;product=organomercurial transporter MerC;protein_id=WP_001340589.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 22602 22877 . - . ID=gene-YPIP275_RS11270;Name=merP;gbkey=Gene;gene=merP;gene_biotype=protein_coding;locus_tag=YPIP275_RS11270;old_locus_tag=YPIP275_2812 NZ_AAOS02000011.1 Protein Homology CDS 22602 22877 . - 0 ID=cds-WP_000732292.1-2;Parent=gene-YPIP275_RS11270;Dbxref=GenBank:WP_000732292.1;Name=WP_000732292.1;Ontology_term=GO:0046689,GO:0045340,GO:0042597;gbkey=CDS;gene=merP;go_component=periplasmic space|0042597||IEA;go_function=mercury ion binding|0045340||IEA;go_process=response to mercury ion|0046689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004636750.1;locus_tag=YPIP275_RS11270;product=mercury resistance system periplasmic binding protein MerP;protein_id=WP_000732292.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 22891 23241 . - . ID=gene-YPIP275_RS11275;Name=YPIP275_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11275;old_locus_tag=YPIP275_2813 NZ_AAOS02000011.1 Protein Homology CDS 22891 23241 . - 0 ID=cds-WP_001294663.1-2;Parent=gene-YPIP275_RS11275;Dbxref=GenBank:WP_001294663.1;Name=WP_001294663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011111453.1;locus_tag=YPIP275_RS11275;product=mercuric transport protein MerT;protein_id=WP_001294663.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 23313 23747 . + . ID=gene-YPIP275_RS11280;Name=merR;gbkey=Gene;gene=merR;gene_biotype=protein_coding;locus_tag=YPIP275_RS11280;old_locus_tag=YPIP275_2815 NZ_AAOS02000011.1 Protein Homology CDS 23313 23747 . + 0 ID=cds-WP_000429836.1-2;Parent=gene-YPIP275_RS11280;Dbxref=GenBank:WP_000429836.1;Name=WP_000429836.1;Ontology_term=GO:0006355,GO:0046689,GO:0003677,GO:0045340;gbkey=CDS;gene=merR;go_function=DNA binding|0003677||IEA,mercury ion binding|0045340||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to mercury ion|0046689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429833.1;locus_tag=YPIP275_RS11280;product=mercury resistance transcriptional regulator MerR;protein_id=WP_000429836.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 23744 26935 . - . ID=gene-YPIP275_RS11285;Name=YPIP275_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11285;old_locus_tag=YPIP275_2814 NZ_AAOS02000011.1 Protein Homology CDS 23744 26935 . - 0 ID=cds-WP_436296047.1;Parent=gene-YPIP275_RS11285;Dbxref=GenBank:WP_436296047.1;Name=WP_436296047.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF051246.2;locus_tag=YPIP275_RS11285;product=DUF6531 domain-containing protein;protein_id=WP_436296047.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 27176 27901 . - . ID=gene-YPIP275_RS11290;Name=YPIP275_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11290;old_locus_tag=YPIP275_2816 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 27176 27901 . - 0 ID=cds-WP_000988732.1-2;Parent=gene-YPIP275_RS11290;Dbxref=GenBank:WP_000988732.1;Name=WP_000988732.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11290;product=hypothetical protein;protein_id=WP_000988732.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 28015 28389 . - . ID=gene-YPIP275_RS11295;Name=YPIP275_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11295;old_locus_tag=YPIP275_2817 NZ_AAOS02000011.1 Protein Homology CDS 28015 28389 . - 0 ID=cds-WP_000868821.1-2;Parent=gene-YPIP275_RS11295;Dbxref=GenBank:WP_000868821.1;Name=WP_000868821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001326390.1;locus_tag=YPIP275_RS11295;product=hypothetical protein;protein_id=WP_000868821.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 28636 28875 . - . ID=gene-YPIP275_RS11300;Name=YPIP275_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11300;old_locus_tag=YPIP275_2819 NZ_AAOS02000011.1 Protein Homology CDS 28636 28875 . - 0 ID=cds-WP_000714162.1-2;Parent=gene-YPIP275_RS11300;Dbxref=GenBank:WP_000714162.1;Name=WP_000714162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141591.1;locus_tag=YPIP275_RS11300;product=permease;protein_id=WP_000714162.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 28948 29226 . - . ID=gene-YPIP275_RS11305;Name=YPIP275_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11305 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 28948 29226 . - 0 ID=cds-WP_000268337.1-2;Parent=gene-YPIP275_RS11305;Dbxref=GenBank:WP_000268337.1;Name=WP_000268337.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11305;product=hypothetical protein;protein_id=WP_000268337.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 29213 30940 . - . ID=gene-YPIP275_RS11310;Name=YPIP275_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11310 NZ_AAOS02000011.1 Protein Homology CDS 29213 30940 . - 0 ID=cds-WP_000122923.1-2;Parent=gene-YPIP275_RS11310;Dbxref=GenBank:WP_000122923.1;Name=WP_000122923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000900352.1;locus_tag=YPIP275_RS11310;product=DUF7146 domain-containing protein;protein_id=WP_000122923.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 31118 31504 . - . ID=gene-YPIP275_RS11315;Name=YPIP275_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11315;old_locus_tag=YPIP275_2823 NZ_AAOS02000011.1 Protein Homology CDS 31118 31504 . - 0 ID=cds-WP_001077335.1-2;Parent=gene-YPIP275_RS11315;Dbxref=GenBank:WP_001077335.1;Name=WP_001077335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001077335.1;locus_tag=YPIP275_RS11315;product=hypothetical protein;protein_id=WP_001077335.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 31962 32813 . - . ID=gene-YPIP275_RS11320;Name=YPIP275_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11320;old_locus_tag=YPIP275_2824 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 31962 32813 . - 0 ID=cds-WP_000595210.1-2;Parent=gene-YPIP275_RS11320;Dbxref=GenBank:WP_000595210.1;Name=WP_000595210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11320;product=hypothetical protein;protein_id=WP_000595210.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 32888 33445 . - . ID=gene-YPIP275_RS11325;Name=YPIP275_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11325;old_locus_tag=YPIP275_2825 NZ_AAOS02000011.1 Protein Homology CDS 32888 33445 . - 0 ID=cds-WP_000064431.1-2;Parent=gene-YPIP275_RS11325;Dbxref=GenBank:WP_000064431.1;Name=WP_000064431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141586.1;locus_tag=YPIP275_RS11325;product=pyruvate dehydrogenase;protein_id=WP_000064431.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 33519 33737 . - . ID=gene-YPIP275_RS11330;Name=YPIP275_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11330 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 33519 33737 . - 0 ID=cds-WP_000260293.1-2;Parent=gene-YPIP275_RS11330;Dbxref=GenBank:WP_000260293.1;Name=WP_000260293.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11330;product=hypothetical protein;protein_id=WP_000260293.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 33751 34020 . - . ID=gene-YPIP275_RS11335;Name=YPIP275_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11335;old_locus_tag=YPIP275_2826 NZ_AAOS02000011.1 Protein Homology CDS 33751 34020 . - 0 ID=cds-WP_000184110.1-2;Parent=gene-YPIP275_RS11335;Dbxref=GenBank:WP_000184110.1;Name=WP_000184110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141584.1;locus_tag=YPIP275_RS11335;product=hypothetical protein;protein_id=WP_000184110.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 34013 34618 . - . ID=gene-YPIP275_RS11340;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=YPIP275_RS11340;old_locus_tag=YPIP275_2827 NZ_AAOS02000011.1 Protein Homology CDS 34013 34618 . - 0 ID=cds-WP_000071870.1-2;Parent=gene-YPIP275_RS11340;Dbxref=GenBank:WP_000071870.1;Name=WP_000071870.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000071869.1;locus_tag=YPIP275_RS11340;product=5'-deoxynucleotidase;protein_id=WP_000071870.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 34690 34893 . - . ID=gene-YPIP275_RS11345;Name=YPIP275_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11345;old_locus_tag=YPIP275_2828 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 34690 34893 . - 0 ID=cds-WP_000050848.1-2;Parent=gene-YPIP275_RS11345;Dbxref=GenBank:WP_000050848.1;Name=WP_000050848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11345;product=hypothetical protein;protein_id=WP_000050848.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 35095 37548 . - . ID=gene-YPIP275_RS11350;Name=YPIP275_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11350;old_locus_tag=YPIP275_2830 NZ_AAOS02000011.1 Protein Homology CDS 35095 37548 . - 0 ID=cds-WP_001187970.1-2;Parent=gene-YPIP275_RS11350;Dbxref=GenBank:WP_001187970.1;Name=WP_001187970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141581.1;locus_tag=YPIP275_RS11350;product=adenine nucleotide alpha hydrolase family protein;protein_id=WP_001187970.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 37636 38022 . - . ID=gene-YPIP275_RS11355;Name=YPIP275_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11355;old_locus_tag=YPIP275_2831 NZ_AAOS02000011.1 Protein Homology CDS 37636 38022 . - 0 ID=cds-WP_000042274.1-2;Parent=gene-YPIP275_RS11355;Dbxref=GenBank:WP_000042274.1;Name=WP_000042274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141580.1;locus_tag=YPIP275_RS11355;product=hypothetical protein;protein_id=WP_000042274.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 38255 38809 . - . ID=gene-YPIP275_RS11360;Name=YPIP275_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11360 NZ_AAOS02000011.1 Protein Homology CDS 38255 38809 . - 0 ID=cds-WP_001093868.1-2;Parent=gene-YPIP275_RS11360;Dbxref=GenBank:WP_001093868.1;Name=WP_001093868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141578.1;locus_tag=YPIP275_RS11360;product=hypothetical protein;protein_id=WP_001093868.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 38883 39182 . - . ID=gene-YPIP275_RS11365;Name=YPIP275_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11365;old_locus_tag=YPIP275_2832 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 38883 39182 . - 0 ID=cds-WP_002210525.1-2;Parent=gene-YPIP275_RS11365;Dbxref=GenBank:WP_002210525.1;Name=WP_002210525.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11365;product=hypothetical protein;protein_id=WP_002210525.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 39375 41000 . - . ID=gene-YPIP275_RS11370;Name=YPIP275_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11370;old_locus_tag=YPIP275_2833 NZ_AAOS02000011.1 Protein Homology CDS 39375 41000 . - 0 ID=cds-WP_000201432.1-2;Parent=gene-YPIP275_RS11370;Dbxref=GenBank:WP_000201432.1;Name=WP_000201432.1;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141576.1;locus_tag=YPIP275_RS11370;product=DNA cytosine methyltransferase;protein_id=WP_000201432.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 41078 41380 . - . ID=gene-YPIP275_RS11375;Name=YPIP275_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11375 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 41078 41380 . - 0 ID=cds-WP_000410925.1-2;Parent=gene-YPIP275_RS11375;Dbxref=GenBank:WP_000410925.1;Name=WP_000410925.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11375;product=hypothetical protein;protein_id=WP_000410925.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 41458 41802 . - . ID=gene-YPIP275_RS11380;Name=YPIP275_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11380 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 41458 41802 . - 0 ID=cds-WP_000209093.1-2;Parent=gene-YPIP275_RS11380;Dbxref=GenBank:WP_000209093.1;Name=WP_000209093.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11380;product=hypothetical protein;protein_id=WP_000209093.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 41994 42347 . - . ID=gene-YPIP275_RS11385;Name=YPIP275_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11385;old_locus_tag=YPIP275_2836 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 41994 42347 . - 0 ID=cds-WP_000994741.1-2;Parent=gene-YPIP275_RS11385;Dbxref=GenBank:WP_000994741.1;Name=WP_000994741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11385;product=hypothetical protein;protein_id=WP_000994741.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 42416 42607 . - . ID=gene-YPIP275_RS11390;Name=YPIP275_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11390;old_locus_tag=YPIP275_2838 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 42416 42607 . - 0 ID=cds-WP_000651508.1-2;Parent=gene-YPIP275_RS11390;Dbxref=GenBank:WP_000651508.1;Name=WP_000651508.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11390;product=hypothetical protein;protein_id=WP_000651508.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 42625 42867 . + . ID=gene-YPIP275_RS28660;Name=YPIP275_RS28660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28660;old_locus_tag=YPIP275_2839 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 42625 42867 . + 0 ID=cds-WP_002210529.1-2;Parent=gene-YPIP275_RS28660;Dbxref=GenBank:WP_002210529.1;Name=WP_002210529.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS28660;product=hypothetical protein;protein_id=WP_002210529.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 42945 43223 . - . ID=gene-YPIP275_RS27300;Name=YPIP275_RS27300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27300;old_locus_tag=YPIP275_2840 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 42945 43223 . - 0 ID=cds-WP_015059622.1-2;Parent=gene-YPIP275_RS27300;Dbxref=GenBank:WP_015059622.1;Name=WP_015059622.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS27300;product=hypothetical protein;protein_id=WP_015059622.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 43387 43776 . - . ID=gene-YPIP275_RS11405;Name=YPIP275_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11405 NZ_AAOS02000011.1 Protein Homology CDS 43387 43776 . - 0 ID=cds-WP_000026577.1-2;Parent=gene-YPIP275_RS11405;Dbxref=GenBank:WP_000026577.1;Name=WP_000026577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141572.1;locus_tag=YPIP275_RS11405;product=hypothetical protein;protein_id=WP_000026577.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 43838 44062 . - . ID=gene-YPIP275_RS11410;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=YPIP275_RS11410;old_locus_tag=YPIP275_2841 NZ_AAOS02000011.1 Protein Homology CDS 43838 44062 . - 0 ID=cds-WP_001102700.1-2;Parent=gene-YPIP275_RS11410;Dbxref=GenBank:WP_001102700.1;Name=WP_001102700.1;Ontology_term=GO:0051537;gbkey=CDS;gene=yfaE;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: protein motif:HMM:NF007985.1;locus_tag=YPIP275_RS11410;product=class I ribonucleotide reductase maintenance protein YfaE;protein_id=WP_001102700.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 44128 44904 . - . ID=gene-YPIP275_RS11415;Name=YPIP275_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11415;old_locus_tag=YPIP275_2842 NZ_AAOS02000011.1 Protein Homology CDS 44128 44904 . - 0 ID=cds-WP_001231126.1;Parent=gene-YPIP275_RS11415;Dbxref=GenBank:WP_001231126.1;Name=WP_001231126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000501488.1;locus_tag=YPIP275_RS11415;product=hypothetical protein;protein_id=WP_001231126.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 45086 45586 . - . ID=gene-YPIP275_RS11420;Name=YPIP275_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11420;old_locus_tag=YPIP275_2843 NZ_AAOS02000011.1 Protein Homology CDS 45086 45586 . - 0 ID=cds-WP_000793769.1-2;Parent=gene-YPIP275_RS11420;Dbxref=GenBank:WP_000793769.1;Name=WP_000793769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141570.1;locus_tag=YPIP275_RS11420;product=hypothetical protein;protein_id=WP_000793769.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 45677 46216 . - . ID=gene-YPIP275_RS11425;Name=YPIP275_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11425;old_locus_tag=YPIP275_2844 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 45677 46216 . - 0 ID=cds-WP_000018872.1-2;Parent=gene-YPIP275_RS11425;Dbxref=GenBank:WP_000018872.1;Name=WP_000018872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11425;product=hypothetical protein;protein_id=WP_000018872.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 46481 46816 . - . ID=gene-YPIP275_RS11430;Name=YPIP275_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11430 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 46481 46816 . - 0 ID=cds-WP_001071288.1-2;Parent=gene-YPIP275_RS11430;Dbxref=GenBank:WP_001071288.1;Name=WP_001071288.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11430;product=hypothetical protein;protein_id=WP_001071288.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 46878 48674 . - . ID=gene-YPIP275_RS11435;Name=YPIP275_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11435;old_locus_tag=YPIP275_2845 NZ_AAOS02000011.1 Protein Homology CDS 46878 48674 . - 0 ID=cds-WP_000039318.1-2;Parent=gene-YPIP275_RS11435;Dbxref=GenBank:WP_000039318.1;Name=WP_000039318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000039317.1;locus_tag=YPIP275_RS11435;product=VWA domain-containing protein;protein_id=WP_000039318.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 48759 50036 . - . ID=gene-YPIP275_RS11440;Name=YPIP275_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11440 NZ_AAOS02000011.1 Protein Homology CDS 48759 50036 . - 0 ID=cds-WP_000170086.1-2;Parent=gene-YPIP275_RS11440;Dbxref=GenBank:WP_000170086.1;Name=WP_000170086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141567.1;locus_tag=YPIP275_RS11440;product=DUF3150 domain-containing protein;protein_id=WP_000170086.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 50236 51246 . - . ID=gene-YPIP275_RS11445;Name=YPIP275_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11445;old_locus_tag=YPIP275_2849 NZ_AAOS02000011.1 Protein Homology CDS 50236 51246 . - 0 ID=cds-WP_000706865.1-2;Parent=gene-YPIP275_RS11445;Dbxref=GenBank:WP_000706865.1;Name=WP_000706865.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: protein motif:HMM:TIGR03033.1;locus_tag=YPIP275_RS11445;product=YqaJ viral recombinase family nuclease;protein_id=WP_000706865.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 51309 52298 . - . ID=gene-YPIP275_RS11450;Name=bet;gbkey=Gene;gene=bet;gene_biotype=protein_coding;locus_tag=YPIP275_RS11450;old_locus_tag=YPIP275_2850 NZ_AAOS02000011.1 Protein Homology CDS 51309 52298 . - 0 ID=cds-WP_001282585.1-2;Parent=gene-YPIP275_RS11450;Dbxref=GenBank:WP_001282585.1;Name=WP_001282585.1;Ontology_term=GO:0006310;gbkey=CDS;gene=bet;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141566.1;locus_tag=YPIP275_RS11450;product=phage recombination protein Bet;protein_id=WP_001282585.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 52393 52923 . - . ID=gene-YPIP275_RS11455;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=YPIP275_RS11455;old_locus_tag=YPIP275_2851 NZ_AAOS02000011.1 Protein Homology CDS 52393 52923 . - 0 ID=cds-WP_000987165.1-2;Parent=gene-YPIP275_RS11455;Dbxref=GenBank:WP_000987165.1;Name=WP_000987165.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151744.1;locus_tag=YPIP275_RS11455;product=single-stranded DNA-binding protein;protein_id=WP_000987165.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 52984 53892 . - . ID=gene-YPIP275_RS11460;Name=YPIP275_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11460;old_locus_tag=YPIP275_2852 NZ_AAOS02000011.1 Protein Homology CDS 52984 53892 . - 0 ID=cds-WP_000739139.1-2;Parent=gene-YPIP275_RS11460;Dbxref=GenBank:WP_000739139.1;Name=WP_000739139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141565.1;locus_tag=YPIP275_RS11460;product=hypothetical protein;protein_id=WP_000739139.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 53903 54871 . - . ID=gene-YPIP275_RS11465;Name=YPIP275_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11465;old_locus_tag=YPIP275_2853 NZ_AAOS02000011.1 Protein Homology CDS 53903 54871 . - 0 ID=cds-WP_000085162.1-2;Parent=gene-YPIP275_RS11465;Dbxref=GenBank:WP_000085162.1;Name=WP_000085162.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000085161.1;locus_tag=YPIP275_RS11465;product=AAA family ATPase;protein_id=WP_000085162.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 55091 55276 . - . ID=gene-YPIP275_RS11470;Name=YPIP275_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11470;old_locus_tag=YPIP275_2854 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 55091 55276 . - 0 ID=cds-WP_001186917.1-2;Parent=gene-YPIP275_RS11470;Dbxref=GenBank:WP_001186917.1;Name=WP_001186917.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11470;product=hypothetical protein;protein_id=WP_001186917.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 55580 55900 . - . ID=gene-YPIP275_RS11475;Name=YPIP275_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11475;old_locus_tag=YPIP275_2855 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 55580 55900 . - 0 ID=cds-WP_000547566.1-2;Parent=gene-YPIP275_RS11475;Dbxref=GenBank:WP_000547566.1;Name=WP_000547566.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11475;product=hypothetical protein;protein_id=WP_000547566.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 56194 56835 . + . ID=gene-YPIP275_RS11480;Name=YPIP275_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11480;old_locus_tag=YPIP275_2856 NZ_AAOS02000011.1 Protein Homology CDS 56194 56835 . + 0 ID=cds-WP_000796664.1-2;Parent=gene-YPIP275_RS11480;Dbxref=GenBank:WP_000796664.1;Name=WP_000796664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014386391.1;locus_tag=YPIP275_RS11480;product=hypothetical protein;protein_id=WP_000796664.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 56958 57818 . + . ID=gene-YPIP275_RS11485;Name=YPIP275_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11485;old_locus_tag=YPIP275_2857 NZ_AAOS02000011.1 Protein Homology CDS 56958 57818 . + 0 ID=cds-WP_000709517.1-2;Parent=gene-YPIP275_RS11485;Dbxref=GenBank:WP_000709517.1;Name=WP_000709517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141559.1;locus_tag=YPIP275_RS11485;product=hypothetical protein;protein_id=WP_000709517.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 57857 60655 . - . ID=gene-YPIP275_RS11490;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=YPIP275_RS11490;old_locus_tag=YPIP275_2858 NZ_AAOS02000011.1 Protein Homology CDS 57857 60655 . - 0 ID=cds-WP_001256487.1-2;Parent=gene-YPIP275_RS11490;Dbxref=GenBank:WP_001256487.1;Name=WP_001256487.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141558.1;locus_tag=YPIP275_RS11490;product=conjugal transfer mating pair stabilization protein TraN;protein_id=WP_001256487.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 60771 61778 . - . ID=gene-YPIP275_RS11495;Name=YPIP275_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11495;old_locus_tag=YPIP275_2859 NZ_AAOS02000011.1 Protein Homology CDS 60771 61778 . - 0 ID=cds-WP_000983283.1-2;Parent=gene-YPIP275_RS11495;Dbxref=GenBank:WP_000983283.1;Name=WP_000983283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141557.1;locus_tag=YPIP275_RS11495;product=TraU family protein;protein_id=WP_000983283.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 61775 62446 . - . ID=gene-YPIP275_RS11500;Name=YPIP275_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11500 NZ_AAOS02000011.1 Protein Homology CDS 61775 62446 . - 0 ID=cds-WP_001337754.1-2;Parent=gene-YPIP275_RS11500;Dbxref=GenBank:WP_001337754.1;Name=WP_001337754.1;Ontology_term=GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001337754.1;locus_tag=YPIP275_RS11500;product=EAL domain-containing protein;protein_id=WP_001337754.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 62443 63708 . - . ID=gene-YPIP275_RS11505;Name=YPIP275_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11505;old_locus_tag=YPIP275_2860 NZ_AAOS02000011.1 Protein Homology CDS 62443 63708 . - 0 ID=cds-WP_000621288.1-2;Parent=gene-YPIP275_RS11505;Dbxref=GenBank:WP_000621288.1;Name=WP_000621288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553264.1;locus_tag=YPIP275_RS11505;product=TrbC family F-type conjugative pilus assembly protein;protein_id=WP_000621288.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 63671 64201 . - . ID=gene-YPIP275_RS11510;Name=YPIP275_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11510;old_locus_tag=YPIP275_2861 NZ_AAOS02000011.1 Protein Homology CDS 63671 64201 . - 0 ID=cds-WP_001010738.1-2;Parent=gene-YPIP275_RS11510;Dbxref=GenBank:WP_001010738.1;Name=WP_001010738.1;Ontology_term=GO:0051604,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845909.1;locus_tag=YPIP275_RS11510;product=S26 family signal peptidase;protein_id=WP_001010738.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 64198 64515 . - . ID=gene-YPIP275_RS11515;Name=YPIP275_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11515;old_locus_tag=YPIP275_2862 NZ_AAOS02000011.1 Protein Homology CDS 64198 64515 . - 0 ID=cds-WP_000351984.1-2;Parent=gene-YPIP275_RS11515;Dbxref=GenBank:WP_000351984.1;Name=WP_000351984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184404.1;locus_tag=YPIP275_RS11515;product=hypothetical protein;protein_id=WP_000351984.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 64530 66977 . - . ID=gene-YPIP275_RS11520;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=YPIP275_RS11520;old_locus_tag=YPIP275_2863 NZ_AAOS02000011.1 Protein Homology CDS 64530 66977 . - 0 ID=cds-WP_000637386.1-2;Parent=gene-YPIP275_RS11520;Dbxref=GenBank:WP_000637386.1;Name=WP_000637386.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141552.1;locus_tag=YPIP275_RS11520;product=type IV secretion system protein TraC;protein_id=WP_000637386.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 66974 67681 . - . ID=gene-YPIP275_RS11525;Name=YPIP275_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11525;old_locus_tag=YPIP275_2864 NZ_AAOS02000011.1 Protein Homology CDS 66974 67681 . - 0 ID=cds-WP_001259347.1-2;Parent=gene-YPIP275_RS11525;Dbxref=GenBank:WP_001259347.1;Name=WP_001259347.1;Ontology_term=GO:0003756;gbkey=CDS;go_function=protein disulfide isomerase activity|0003756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001259344.1;locus_tag=YPIP275_RS11525;product=DsbC family protein;protein_id=WP_001259347.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 67830 73361 . - . ID=gene-YPIP275_RS11530;Name=YPIP275_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11530;old_locus_tag=YPIP275_2865 NZ_AAOS02000011.1 Protein Homology CDS 67830 73361 . - 0 ID=cds-WP_000606833.1-2;Parent=gene-YPIP275_RS11530;Dbxref=GenBank:WP_000606833.1;Name=WP_000606833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606836.1;locus_tag=YPIP275_RS11530;product=Ig-like domain-containing protein;protein_id=WP_000606833.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 73562 73945 . - . ID=gene-YPIP275_RS11535;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=YPIP275_RS11535 NZ_AAOS02000011.1 Protein Homology CDS 73562 73945 . - 0 ID=cds-WP_000993344.1;Parent=gene-YPIP275_RS11535;Dbxref=GenBank:WP_000993344.1;Name=WP_000993344.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184407.1;locus_tag=YPIP275_RS11535;product=TraA family conjugative transfer protein;protein_id=WP_000993344.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 73958 74536 . - . ID=gene-YPIP275_RS11540;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=YPIP275_RS11540;old_locus_tag=YPIP275_2867 NZ_AAOS02000011.1 Protein Homology CDS 73958 74536 . - 0 ID=cds-WP_000793435.1-2;Parent=gene-YPIP275_RS11540;Dbxref=GenBank:WP_000793435.1;Name=WP_000793435.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845916.1;locus_tag=YPIP275_RS11540;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WP_000793435.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 74533 75849 . - . ID=gene-YPIP275_RS11545;Name=YPIP275_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11545;old_locus_tag=YPIP275_2868 NZ_AAOS02000011.1 Protein Homology CDS 74533 75849 . - 0 ID=cds-WP_000595749.1;Parent=gene-YPIP275_RS11545;Dbxref=GenBank:WP_000595749.1;Name=WP_000595749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141545.1;locus_tag=YPIP275_RS11545;product=TraB/VirB10 family protein;protein_id=WP_000595749.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 75846 76763 . - . ID=gene-YPIP275_RS11550;Name=YPIP275_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11550;old_locus_tag=YPIP275_2869 NZ_AAOS02000011.1 Protein Homology CDS 75846 76763 . - 0 ID=cds-WP_000794249.1-2;Parent=gene-YPIP275_RS11550;Dbxref=GenBank:WP_000794249.1;Name=WP_000794249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141544.1;locus_tag=YPIP275_RS11550;product=TraK domain-containing protein;protein_id=WP_000794249.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 76747 77373 . - . ID=gene-YPIP275_RS11555;Name=YPIP275_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11555;old_locus_tag=YPIP275_2870 NZ_AAOS02000011.1 Protein Homology CDS 76747 77373 . - 0 ID=cds-WP_001049716.1-2;Parent=gene-YPIP275_RS11555;Dbxref=GenBank:WP_001049716.1;Name=WP_001049716.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017152.7;locus_tag=YPIP275_RS11555;product=TraE/TraK family type IV conjugative transfer system protein;protein_id=WP_001049716.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 77370 77651 . - . ID=gene-YPIP275_RS11560;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=YPIP275_RS11560 NZ_AAOS02000011.1 Protein Homology CDS 77370 77651 . - 0 ID=cds-WP_000805625.1-2;Parent=gene-YPIP275_RS11560;Dbxref=GenBank:WP_000805625.1;Name=WP_000805625.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000433889.1;locus_tag=YPIP275_RS11560;product=type IV conjugative transfer system protein TraL;protein_id=WP_000805625.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 77796 78161 . - . ID=gene-YPIP275_RS11565;Name=YPIP275_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11565;old_locus_tag=YPIP275_2871 NZ_AAOS02000011.1 Protein Homology CDS 77796 78161 . - 0 ID=cds-WP_001052531.1-2;Parent=gene-YPIP275_RS11565;Dbxref=GenBank:WP_001052531.1;Name=WP_001052531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509509.1;locus_tag=YPIP275_RS11565;product=hypothetical protein;protein_id=WP_001052531.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 78173 78316 . - . ID=gene-YPIP275_RS28665;Name=YPIP275_RS28665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28665 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 78173 78316 . - 0 ID=cds-WP_001275801.1-2;Parent=gene-YPIP275_RS28665;Dbxref=GenBank:WP_001275801.1;Name=WP_001275801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS28665;product=hypothetical protein;protein_id=WP_001275801.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 78497 79159 . - . ID=gene-YPIP275_RS11570;Name=YPIP275_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11570;old_locus_tag=YPIP275_2872 NZ_AAOS02000011.1 Protein Homology CDS 78497 79159 . - 0 ID=cds-WP_001231463.1-2;Parent=gene-YPIP275_RS11570;Dbxref=GenBank:WP_001231463.1;Name=WP_001231463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231465.1;locus_tag=YPIP275_RS11570;product=hypothetical protein;protein_id=WP_001231463.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 79159 79536 . - . ID=gene-YPIP275_RS11575;Name=YPIP275_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11575;old_locus_tag=YPIP275_2873 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 79159 79536 . - 0 ID=cds-WP_000869261.1-2;Parent=gene-YPIP275_RS11575;Dbxref=GenBank:WP_000869261.1;Name=WP_000869261.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11575;product=hypothetical protein;protein_id=WP_000869261.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 79636 79764 . + . ID=gene-YPIP275_RS28670;Name=YPIP275_RS28670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28670 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 79636 79764 . + 0 ID=cds-WP_366534730.1-2;Parent=gene-YPIP275_RS28670;Dbxref=GenBank:WP_366534730.1;Name=WP_366534730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS28670;product=hypothetical protein;protein_id=WP_366534730.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 79778 79954 . - . ID=gene-YPIP275_RS28675;Name=YPIP275_RS28675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28675;old_locus_tag=YPIP275_2874 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 79778 79954 . - 0 ID=cds-WP_169342285.1-2;Parent=gene-YPIP275_RS28675;Dbxref=GenBank:WP_169342285.1;Name=WP_169342285.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS28675;product=hypothetical protein;protein_id=WP_169342285.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 80002 80631 . - . ID=gene-YPIP275_RS11585;Name=YPIP275_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11585;old_locus_tag=YPIP275_2875 NZ_AAOS02000011.1 Protein Homology CDS 80002 80631 . - 0 ID=cds-WP_000743450.1-2;Parent=gene-YPIP275_RS11585;Dbxref=GenBank:WP_000743450.1;Name=WP_000743450.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025706.7;locus_tag=YPIP275_RS11585;product=IncC plasmid conjugative DNA transfer DtrJ family protein;protein_id=WP_000743450.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 80588 81133 . - . ID=gene-YPIP275_RS11590;Name=YPIP275_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11590;old_locus_tag=YPIP275_2876 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 80588 81133 . - 0 ID=cds-WP_000228720.1-2;Parent=gene-YPIP275_RS11590;Dbxref=GenBank:WP_000228720.1;Name=WP_000228720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11590;product=hypothetical protein;protein_id=WP_000228720.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 81183 83048 . - . ID=gene-YPIP275_RS11595;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=YPIP275_RS11595;old_locus_tag=YPIP275_2877 NZ_AAOS02000011.1 Protein Homology CDS 81183 83048 . - 0 ID=cds-WP_000178856.1-2;Parent=gene-YPIP275_RS11595;Dbxref=GenBank:WP_000178856.1;Name=WP_000178856.1;Note=Members of this protein family are the putative conjugative coupling factor%2C TraD%2C as the term is used for the SXT and TOL plasmid systems.;Ontology_term=GO:0015074;gbkey=CDS;gene=traD;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000661887.1;locus_tag=YPIP275_RS11595;product=conjugative transfer system coupling protein TraD;protein_id=WP_000178856.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 83045 86023 . - . ID=gene-YPIP275_RS26325;Name=mobH;gbkey=Gene;gene=mobH;gene_biotype=protein_coding;locus_tag=YPIP275_RS26325;old_locus_tag=YPIP275_2878 NZ_AAOS02000011.1 Protein Homology CDS 83045 86023 . - 0 ID=cds-WP_001337757.1-2;Parent=gene-YPIP275_RS26325;Dbxref=GenBank:WP_001337757.1;Name=WP_001337757.1;gbkey=CDS;gene=mobH;inference=COORDINATES: protein motif:HMM:NF041494.1;locus_tag=YPIP275_RS26325;product=MobH family relaxase;protein_id=WP_001337757.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 86191 86808 . + . ID=gene-YPIP275_RS11605;Name=YPIP275_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11605;old_locus_tag=YPIP275_2879 NZ_AAOS02000011.1 Protein Homology CDS 86191 86808 . + 0 ID=cds-WP_001249396.1-2;Parent=gene-YPIP275_RS11605;Dbxref=GenBank:WP_001249396.1;Name=WP_001249396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184413.1;locus_tag=YPIP275_RS11605;product=hypothetical protein;protein_id=WP_001249396.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 86790 87023 . + . ID=gene-YPIP275_RS11610;Name=YPIP275_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11610 NZ_AAOS02000011.1 Protein Homology CDS 86790 87023 . + 0 ID=cds-WP_001191892.1-2;Parent=gene-YPIP275_RS11610;Dbxref=GenBank:WP_001191892.1;Name=WP_001191892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845927.1;locus_tag=YPIP275_RS11610;product=hypothetical protein;protein_id=WP_001191892.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 87023 89215 . + . ID=gene-YPIP275_RS11615;Name=YPIP275_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11615;old_locus_tag=YPIP275_2880 NZ_AAOS02000011.1 Protein Homology CDS 87023 89215 . + 0 ID=cds-WP_000366822.1-2;Parent=gene-YPIP275_RS11615;Dbxref=GenBank:WP_000366822.1;Name=WP_000366822.1;Ontology_term=GO:0006265,GO:0003677,GO:0003917;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845928.1;locus_tag=YPIP275_RS11615;product=DNA topoisomerase III;protein_id=WP_000366822.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 89230 89718 . + . ID=gene-YPIP275_RS11620;Name=YPIP275_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11620;old_locus_tag=YPIP275_2881 NZ_AAOS02000011.1 Protein Homology CDS 89230 89718 . + 0 ID=cds-WP_000468105.1-2;Parent=gene-YPIP275_RS11620;Dbxref=GenBank:WP_000468105.1;Name=WP_000468105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141535.1;locus_tag=YPIP275_RS11620;product=hypothetical protein;protein_id=WP_000468105.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 89810 90088 . - . ID=gene-YPIP275_RS11625;Name=YPIP275_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11625 NZ_AAOS02000011.1 Protein Homology CDS 89810 90088 . - 0 ID=cds-WP_014386427.1-2;Parent=gene-YPIP275_RS11625;Dbxref=GenBank:WP_014386427.1;Name=WP_014386427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000002133.1;locus_tag=YPIP275_RS11625;product=hypothetical protein;protein_id=WP_014386427.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 90321 90938 . - . ID=gene-YPIP275_RS11635;Name=YPIP275_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11635;old_locus_tag=YPIP275_2882 NZ_AAOS02000011.1 Protein Homology CDS 90321 90938 . - 0 ID=cds-WP_000464631.1-2;Parent=gene-YPIP275_RS11635;Dbxref=GenBank:WP_000464631.1;Name=WP_000464631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210538.1;locus_tag=YPIP275_RS11635;product=hypothetical protein;protein_id=WP_000464631.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 91032 91250 . - . ID=gene-YPIP275_RS11640;Name=YPIP275_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11640;old_locus_tag=YPIP275_2883 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 91032 91250 . - 0 ID=cds-WP_000362482.1-2;Parent=gene-YPIP275_RS11640;Dbxref=GenBank:WP_000362482.1;Name=WP_000362482.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11640;product=hypothetical protein;protein_id=WP_000362482.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 91254 91517 . - . ID=gene-YPIP275_RS28680;Name=YPIP275_RS28680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28680 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 91254 91517 . - 0 ID=cds-WP_001337759.1;Parent=gene-YPIP275_RS28680;Dbxref=GenBank:WP_001337759.1;Name=WP_001337759.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS28680;product=hypothetical protein;protein_id=WP_001337759.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 91456 92112 . - . ID=gene-YPIP275_RS11645;Name=YPIP275_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11645 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 91456 92112 . - 0 ID=cds-WP_000268551.1-2;Parent=gene-YPIP275_RS11645;Dbxref=GenBank:WP_000268551.1;Name=WP_000268551.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11645;product=hypothetical protein;protein_id=WP_000268551.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 92112 93539 . - . ID=gene-YPIP275_RS11650;Name=YPIP275_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11650;old_locus_tag=YPIP275_2885 NZ_AAOS02000011.1 Protein Homology CDS 92112 93539 . - 0 ID=cds-WP_000936896.1-2;Parent=gene-YPIP275_RS11650;Dbxref=GenBank:WP_000936896.1;Name=WP_000936896.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365441.1;locus_tag=YPIP275_RS11650;product=DNA cytosine methyltransferase;protein_id=WP_000936896.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 93543 94043 . - . ID=gene-YPIP275_RS11655;Name=YPIP275_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11655 NZ_AAOS02000011.1 Protein Homology CDS 93543 94043 . - 0 ID=cds-WP_000647189.1-2;Parent=gene-YPIP275_RS11655;Dbxref=GenBank:WP_000647189.1;Name=WP_000647189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647190.1;locus_tag=YPIP275_RS11655;product=hypothetical protein;protein_id=WP_000647189.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 94052 94363 . - . ID=gene-YPIP275_RS11660;Name=YPIP275_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11660;old_locus_tag=YPIP275_2887 NZ_AAOS02000011.1 Protein Homology CDS 94052 94363 . - 0 ID=cds-WP_002210541.1-2;Parent=gene-YPIP275_RS11660;Dbxref=GenBank:WP_002210541.1;Name=WP_002210541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000348669.1;locus_tag=YPIP275_RS11660;product=hypothetical protein;protein_id=WP_002210541.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 94369 94875 . - . ID=gene-YPIP275_RS11665;Name=YPIP275_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11665 NZ_AAOS02000011.1 Protein Homology CDS 94369 94875 . - 0 ID=cds-WP_000566600.1-2;Parent=gene-YPIP275_RS11665;Dbxref=GenBank:WP_000566600.1;Name=WP_000566600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015058947.1;locus_tag=YPIP275_RS11665;product=hypothetical protein;protein_id=WP_000566600.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 94868 95542 . - . ID=gene-YPIP275_RS11670;Name=YPIP275_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11670;old_locus_tag=YPIP275_2889 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 94868 95542 . - 0 ID=cds-WP_000344151.1-2;Parent=gene-YPIP275_RS11670;Dbxref=GenBank:WP_000344151.1;Name=WP_000344151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11670;product=thymidylate kinase;protein_id=WP_000344151.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 95517 95798 . - . ID=gene-YPIP275_RS11675;Name=YPIP275_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11675 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 95517 95798 . - 0 ID=cds-WP_000044824.1-2;Parent=gene-YPIP275_RS11675;Dbxref=GenBank:WP_000044824.1;Name=WP_000044824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11675;product=hypothetical protein;protein_id=WP_000044824.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 95791 96168 . - . ID=gene-YPIP275_RS11680;Name=YPIP275_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11680 NZ_AAOS02000011.1 Protein Homology CDS 95791 96168 . - 0 ID=cds-WP_001125905.1-2;Parent=gene-YPIP275_RS11680;Dbxref=GenBank:WP_001125905.1;Name=WP_001125905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026454.1;locus_tag=YPIP275_RS11680;product=hypothetical protein;protein_id=WP_001125905.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 96472 96627 . - . ID=gene-YPIP275_RS28685;Name=YPIP275_RS28685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28685;old_locus_tag=YPIP275_2891 NZ_AAOS02000011.1 Protein Homology CDS 96472 96627 . - 0 ID=cds-WP_011742537.1;Parent=gene-YPIP275_RS28685;Dbxref=GenBank:WP_011742537.1;Name=WP_011742537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141531.1;locus_tag=YPIP275_RS28685;product=hypothetical protein;protein_id=WP_011742537.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 96722 97357 . + . ID=gene-YPIP275_RS11685;Name=YPIP275_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11685;old_locus_tag=YPIP275_2892 NZ_AAOS02000011.1 Protein Homology CDS 96722 97357 . + 0 ID=cds-WP_000074431.1-2;Parent=gene-YPIP275_RS11685;Dbxref=GenBank:WP_000074431.1;Name=WP_000074431.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141530.1;locus_tag=YPIP275_RS11685;product=N-6 DNA methylase;protein_id=WP_000074431.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 97410 97682 . - . ID=gene-YPIP275_RS11690;Name=YPIP275_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11690 NZ_AAOS02000011.1 Protein Homology CDS 97410 97682 . - 0 ID=cds-WP_000703827.1-2;Parent=gene-YPIP275_RS11690;Dbxref=GenBank:WP_000703827.1;Name=WP_000703827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703827.1;locus_tag=YPIP275_RS11690;product=helix-turn-helix domain-containing protein;protein_id=WP_000703827.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 97731 98912 . - . ID=gene-YPIP275_RS11695;Name=YPIP275_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11695;old_locus_tag=YPIP275_2893 NZ_AAOS02000011.1 Protein Homology CDS 97731 98912 . - 0 ID=cds-WP_001207227.1-2;Parent=gene-YPIP275_RS11695;Dbxref=GenBank:WP_001207227.1;Name=WP_001207227.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141528.1;locus_tag=YPIP275_RS11695;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_001207227.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 98916 99701 . - . ID=gene-YPIP275_RS11700;Name=YPIP275_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11700;old_locus_tag=YPIP275_2894 NZ_AAOS02000011.1 Protein Homology CDS 98916 99701 . - 0 ID=cds-WP_001151304.1-2;Parent=gene-YPIP275_RS11700;Dbxref=GenBank:WP_001151304.1;Name=WP_001151304.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845937.1;locus_tag=YPIP275_RS11700;product=ParA family protein;protein_id=WP_001151304.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 99875 100162 . - . ID=gene-YPIP275_RS11705;Name=YPIP275_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11705;old_locus_tag=YPIP275_2895 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 99875 100162 . - 0 ID=cds-WP_001694508.1;Parent=gene-YPIP275_RS11705;Dbxref=GenBank:WP_001694508.1;Name=WP_001694508.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11705;product=hypothetical protein;protein_id=WP_001694508.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 100493 101308 . + . ID=gene-YPIP275_RS11710;Name=sul2;gbkey=Gene;gene=sul2;gene_biotype=protein_coding;locus_tag=YPIP275_RS11710;old_locus_tag=YPIP275_2896 NZ_AAOS02000011.1 Protein Homology CDS 100493 101308 . + 0 ID=cds-WP_001043260.1-2;Parent=gene-YPIP275_RS11710;Dbxref=GenBank:WP_001043260.1;Name=WP_001043260.1;gbkey=CDS;gene=sul2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043260.1;locus_tag=YPIP275_RS11710;product=sulfonamide-resistant dihydropteroate synthase Sul2;protein_id=WP_001043260.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 101395 101697 . + . ID=gene-YPIP275_RS11715;Name=YPIP275_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11715;old_locus_tag=YPIP275_2897 NZ_AAOS02000011.1 Protein Homology CDS 101395 101697 . + 0 ID=cds-WP_000251875.1;Parent=gene-YPIP275_RS11715;Dbxref=GenBank:WP_000251875.1;Name=WP_000251875.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014877.7;locus_tag=YPIP275_RS11715;product=phosphoglucosamine mutase;protein_id=WP_000251875.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 101873 103366 . - . ID=gene-YPIP275_RS11720;Name=YPIP275_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11720;old_locus_tag=YPIP275_2898 NZ_AAOS02000011.1 Protein Homology CDS 101873 103366 . - 0 ID=cds-WP_001120888.1-2;Parent=gene-YPIP275_RS11720;Dbxref=GenBank:WP_001120888.1;Name=WP_001120888.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_061586541.1;locus_tag=YPIP275_RS11720;product=IS91-like element ISCR2 family transposase;protein_id=WP_001120888.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 103577 103801 . - . ID=gene-YPIP275_RS11725;Name=YPIP275_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11725;old_locus_tag=YPIP275_2899 NZ_AAOS02000011.1 Protein Homology CDS 103577 103801 . - 0 ID=cds-WP_000743213.1-2;Parent=gene-YPIP275_RS11725;Dbxref=GenBank:WP_000743213.1;Name=WP_000743213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163648.1;locus_tag=YPIP275_RS11725;product=hypothetical protein;protein_id=WP_000743213.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 103798 104535 . - . ID=gene-YPIP275_RS11730;Name=YPIP275_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11730;old_locus_tag=YPIP275_2900 NZ_AAOS02000011.1 Protein Homology CDS 103798 104535 . - 0 ID=cds-WP_001366550.1-2;Parent=gene-YPIP275_RS11730;Dbxref=GenBank:WP_001366550.1;Name=WP_001366550.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001370723.1;locus_tag=YPIP275_RS11730;product=recombinase family protein;protein_id=WP_001366550.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 105021 105161 . - . ID=gene-YPIP275_RS28690;Name=YPIP275_RS28690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28690;old_locus_tag=YPIP275_2901 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 105021 105161 . - 0 ID=cds-WP_001044210.1-2;Parent=gene-YPIP275_RS28690;Dbxref=GenBank:WP_001044210.1;Name=WP_001044210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS28690;product=hypothetical protein;protein_id=WP_001044210.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 105167 105871 . - . ID=gene-YPIP275_RS11740;Name=YPIP275_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11740;old_locus_tag=YPIP275_2902 NZ_AAOS02000011.1 Protein Homology CDS 105167 105871 . - 0 ID=cds-WP_001067855.1-17;Parent=gene-YPIP275_RS11740;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=YPIP275_RS11740;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_AAOS02000011.1 RefSeq pseudogene 106178 106357 . + . ID=gene-YPIP275_RS11745;Name=YPIP275_RS11745;end_range=106357,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS11745;partial=true;pseudo=true NZ_AAOS02000011.1 Protein Homology CDS 106178 106357 . + 0 ID=cds-YPIP275_RS11745;Parent=gene-YPIP275_RS11745;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=106357,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465662.1;locus_tag=YPIP275_RS11745;partial=true;product=ArsR/SmtB family transcription factor;pseudo=true;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 106422 107126 . + . ID=gene-YPIP275_RS11750;Name=YPIP275_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11750;old_locus_tag=YPIP275_2905 NZ_AAOS02000011.1 Protein Homology CDS 106422 107126 . + 0 ID=cds-WP_001067855.1-18;Parent=gene-YPIP275_RS11750;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=YPIP275_RS11750;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_AAOS02000011.1 RefSeq pseudogene 107179 107376 . - . ID=gene-YPIP275_RS27315;Name=YPIP275_RS27315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS27315;partial=true;pseudo=true;start_range=.,107179 NZ_AAOS02000011.1 Protein Homology CDS 107179 107376 . - 0 ID=cds-YPIP275_RS27315;Parent=gene-YPIP275_RS27315;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=YPIP275_RS27315;partial=true;product=metal/formaldehyde-sensitive transcriptional repressor;pseudo=true;start_range=.,107179;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 107581 107910 . - . ID=gene-YPIP275_RS11755;Name=YPIP275_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11755;old_locus_tag=YPIP275_2906 NZ_AAOS02000011.1 Protein Homology CDS 107581 107910 . - 0 ID=cds-WP_002210543.1-2;Parent=gene-YPIP275_RS11755;Dbxref=GenBank:WP_002210543.1;Name=WP_002210543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210543.1;locus_tag=YPIP275_RS11755;product=hypothetical protein;protein_id=WP_002210543.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 108188 108565 . + . ID=gene-YPIP275_RS11760;Name=YPIP275_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11760;old_locus_tag=YPIP275_2907 NZ_AAOS02000011.1 Protein Homology CDS 108188 108565 . + 0 ID=cds-WP_043865431.1-2;Parent=gene-YPIP275_RS11760;Dbxref=GenBank:WP_043865431.1;Name=WP_043865431.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000656306.1;locus_tag=YPIP275_RS11760;product=GNAT family N-acetyltransferase;protein_id=WP_043865431.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 108766 109425 . - . ID=gene-YPIP275_RS11765;Name=YPIP275_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11765;old_locus_tag=YPIP275_2908 NZ_AAOS02000011.1 Protein Homology CDS 108766 109425 . - 0 ID=cds-WP_002210545.1-2;Parent=gene-YPIP275_RS11765;Dbxref=GenBank:WP_002210545.1;Name=WP_002210545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011152976.1;locus_tag=YPIP275_RS11765;product=type A-1 chloramphenicol O-acetyltransferase;protein_id=WP_002210545.1;transl_table=11 NZ_AAOS02000011.1 RefSeq pseudogene 109579 110061 . + . ID=gene-YPIP275_RS11770;Name=YPIP275_RS11770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS11770;old_locus_tag=YPIP275_2909;partial=true;pseudo=true;start_range=.,109579 NZ_AAOS02000011.1 Protein Homology CDS 109579 110061 . + 0 ID=cds-YPIP275_RS11770;Parent=gene-YPIP275_RS11770;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009307,GO:0003677,GO:0009036;gbkey=CDS;go_function=DNA binding|0003677||IEA,type II site-specific deoxyribonuclease activity|0009036||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110242.1;locus_tag=YPIP275_RS11770;partial=true;product=type II restriction endonuclease;pseudo=true;start_range=.,109579;transl_table=11 NZ_AAOS02000011.1 RefSeq pseudogene 110095 110859 . - . ID=gene-YPIP275_RS11775;Name=dcm;end_range=110859,.;gbkey=Gene;gene=dcm;gene_biotype=pseudogene;locus_tag=YPIP275_RS11775;old_locus_tag=YPIP275_2910;partial=true;pseudo=true NZ_AAOS02000011.1 Protein Homology CDS 110095 110859 . - 0 ID=cds-YPIP275_RS11775;Parent=gene-YPIP275_RS11775;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006304,GO:0003886;end_range=110859,.;gbkey=CDS;gene=dcm;go_function=DNA (cytosine-5-)-methyltransferase activity|0003886||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288433.1;locus_tag=YPIP275_RS11775;partial=true;product=DNA (cytosine-5-)-methyltransferase;pseudo=true;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 110920 111624 . + . ID=gene-YPIP275_RS11780;Name=YPIP275_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11780;old_locus_tag=YPIP275_2911 NZ_AAOS02000011.1 Protein Homology CDS 110920 111624 . + 0 ID=cds-WP_001067855.1-19;Parent=gene-YPIP275_RS11780;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=YPIP275_RS11780;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 111570 112007 . - . ID=gene-YPIP275_RS11785;Name=YPIP275_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11785 NZ_AAOS02000011.1 Protein Homology CDS 111570 112007 . - 0 ID=cds-WP_000359512.1-2;Parent=gene-YPIP275_RS11785;Dbxref=GenBank:WP_000359512.1;Name=WP_000359512.1;Ontology_term=GO:0006270,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: protein motif:HMM:NF013235.7;locus_tag=YPIP275_RS11785;product=replication initiation protein;protein_id=WP_000359512.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 112567 112908 . + . ID=gene-YPIP275_RS11790;Name=ardK;gbkey=Gene;gene=ardK;gene_biotype=protein_coding;locus_tag=YPIP275_RS11790;old_locus_tag=YPIP275_2912 NZ_AAOS02000011.1 Protein Homology CDS 112567 112908 . + 0 ID=cds-WP_000057569.1-2;Parent=gene-YPIP275_RS11790;Dbxref=GenBank:WP_000057569.1;Name=WP_000057569.1;gbkey=CDS;gene=ardK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057569.1;locus_tag=YPIP275_RS11790;product=antirestriction protein ArdAB regulator ArdK;protein_id=WP_000057569.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 112923 113714 . - . ID=gene-YPIP275_RS11795;Name=YPIP275_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11795;old_locus_tag=YPIP275_2913 NZ_AAOS02000011.1 Protein Homology CDS 112923 113714 . - 0 ID=cds-WP_004248792.1-2;Parent=gene-YPIP275_RS11795;Dbxref=GenBank:WP_004248792.1;Name=WP_004248792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012561121.1;locus_tag=YPIP275_RS11795;product=SprT-like domain-containing protein;protein_id=WP_004248792.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 113895 114731 . - . ID=gene-YPIP275_RS11800;Name=YPIP275_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11800;old_locus_tag=YPIP275_2914 NZ_AAOS02000011.1 Protein Homology CDS 113895 114731 . - 0 ID=cds-WP_000480968.1-2;Parent=gene-YPIP275_RS11800;Dbxref=GenBank:WP_000480968.1;Name=WP_000480968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480972.1;locus_tag=YPIP275_RS11800;product=aminoglycoside O-phosphotransferase APH(6)-Id;protein_id=WP_000480968.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 114731 115534 . - . ID=gene-YPIP275_RS11805;Name=aph(3'')-Ib;gbkey=Gene;gene=aph(3'')-Ib;gene_biotype=protein_coding;locus_tag=YPIP275_RS11805;old_locus_tag=YPIP275_2915 NZ_AAOS02000011.1 Protein Homology CDS 114731 115534 . - 0 ID=cds-WP_001082319.1-2;Parent=gene-YPIP275_RS11805;Dbxref=GenBank:WP_001082319.1;Name=WP_001082319.1;gbkey=CDS;gene=aph(3'')-Ib;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010890156.1;locus_tag=YPIP275_RS11805;product=aminoglycoside O-phosphotransferase APH(3'')-Ib;protein_id=WP_001082319.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 115600 116214 . - . ID=gene-YPIP275_RS11810;Name=YPIP275_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11810;old_locus_tag=YPIP275_2916 NZ_AAOS02000011.1 Protein Homology CDS 115600 116214 . - 0 ID=cds-WP_000904895.1-2;Parent=gene-YPIP275_RS11810;Dbxref=GenBank:WP_000904895.1;Name=WP_000904895.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184027.1;locus_tag=YPIP275_RS11810;product=recombinase family protein;protein_id=WP_000904895.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 116389 117093 . + . ID=gene-YPIP275_RS11815;Name=YPIP275_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11815;old_locus_tag=YPIP275_2918 NZ_AAOS02000011.1 Protein Homology CDS 116389 117093 . + 0 ID=cds-WP_001067855.1-20;Parent=gene-YPIP275_RS11815;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=YPIP275_RS11815;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 117212 118027 . + . ID=gene-YPIP275_RS11820;Name=aph(3')-Ia;gbkey=Gene;gene=aph(3')-Ia;gene_biotype=protein_coding;locus_tag=YPIP275_RS11820;old_locus_tag=YPIP275_2919 NZ_AAOS02000011.1 Protein Homology CDS 117212 118027 . + 0 ID=cds-WP_000018326.1-2;Parent=gene-YPIP275_RS11820;Dbxref=GenBank:WP_000018326.1;Name=WP_000018326.1;gbkey=CDS;gene=aph(3')-Ia;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032492145.1;locus_tag=YPIP275_RS11820;product=aminoglycoside O-phosphotransferase APH(3')-Ia;protein_id=WP_000018326.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 118210 118914 . - . ID=gene-YPIP275_RS11825;Name=YPIP275_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11825;old_locus_tag=YPIP275_2920 NZ_AAOS02000011.1 Protein Homology CDS 118210 118914 . - 0 ID=cds-WP_001067855.1-21;Parent=gene-YPIP275_RS11825;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=YPIP275_RS11825;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_AAOS02000011.1 RefSeq pseudogene 118978 119292 . - . ID=gene-YPIP275_RS11830;Name=YPIP275_RS11830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS11830;old_locus_tag=YPIP275_2921;partial=true;pseudo=true;start_range=.,118978 NZ_AAOS02000011.1 Protein Homology CDS 118978 119292 . - 0 ID=cds-YPIP275_RS11830;Parent=gene-YPIP275_RS11830;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006939175.1;locus_tag=YPIP275_RS11830;partial=true;product=IS6-like element IS26 family transposase;pseudo=true;start_range=.,118978;transl_table=11 NZ_AAOS02000011.1 RefSeq pseudogene 119357 119536 . - . ID=gene-YPIP275_RS11835;Name=YPIP275_RS11835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS11835;partial=true;pseudo=true;start_range=.,119357 NZ_AAOS02000011.1 Protein Homology CDS 119357 119536 . - 0 ID=cds-YPIP275_RS11835;Parent=gene-YPIP275_RS11835;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465662.1;locus_tag=YPIP275_RS11835;partial=true;product=ArsR/SmtB family transcription factor;pseudo=true;start_range=.,119357;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 119863 120090 . + . ID=gene-YPIP275_RS27330;Name=YPIP275_RS27330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27330 NZ_AAOS02000011.1 Protein Homology CDS 119863 120090 . + 0 ID=cds-WP_042345711.1;Parent=gene-YPIP275_RS27330;Dbxref=GenBank:WP_042345711.1;Name=WP_042345711.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042748.5;locus_tag=YPIP275_RS27330;product=DUF6710 family protein;protein_id=WP_042345711.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 120264 120797 . - . ID=gene-YPIP275_RS11845;Name=YPIP275_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11845;old_locus_tag=YPIP275_2925 NZ_AAOS02000011.1 Protein Homology CDS 120264 120797 . - 0 ID=cds-WP_000792636.1-2;Parent=gene-YPIP275_RS11845;Dbxref=GenBank:WP_000792636.1;Name=WP_000792636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000731969.1;locus_tag=YPIP275_RS11845;product=phospholipase D family nuclease;protein_id=WP_000792636.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 120797 121792 . - . ID=gene-YPIP275_RS11850;Name=YPIP275_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11850;old_locus_tag=YPIP275_2926 NZ_AAOS02000011.1 Protein Homology CDS 120797 121792 . - 0 ID=cds-WP_000128596.1-2;Parent=gene-YPIP275_RS11850;Dbxref=GenBank:WP_000128596.1;Name=WP_000128596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000128596.1;locus_tag=YPIP275_RS11850;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=WP_000128596.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 121834 122994 . - . ID=gene-YPIP275_RS11855;Name=virB10;gbkey=Gene;gene=virB10;gene_biotype=protein_coding;locus_tag=YPIP275_RS11855;old_locus_tag=YPIP275_2927 NZ_AAOS02000011.1 Protein Homology CDS 121834 122994 . - 0 ID=cds-WP_000101710.1-2;Parent=gene-YPIP275_RS11855;Dbxref=GenBank:WP_000101710.1;Name=WP_000101710.1;gbkey=CDS;gene=virB10;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101711.1;locus_tag=YPIP275_RS11855;product=type IV secretion system protein VirB10;protein_id=WP_000101710.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 122994 123878 . - . ID=gene-YPIP275_RS11860;Name=YPIP275_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11860;old_locus_tag=YPIP275_2928 NZ_AAOS02000011.1 Protein Homology CDS 122994 123878 . - 0 ID=cds-WP_000735066.1-2;Parent=gene-YPIP275_RS11860;Dbxref=GenBank:WP_000735066.1;Name=WP_000735066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323166.1;locus_tag=YPIP275_RS11860;product=TrbG/VirB9 family P-type conjugative transfer protein;protein_id=WP_000735066.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 123889 124263 . - . ID=gene-YPIP275_RS11865;Name=YPIP275_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11865;old_locus_tag=YPIP275_2929 NZ_AAOS02000011.1 Protein Homology CDS 123889 124263 . - 0 ID=cds-WP_223290844.1;Parent=gene-YPIP275_RS11865;Dbxref=GenBank:WP_223290844.1;Name=WP_223290844.1;Ontology_term=GO:0030255;gbkey=CDS;go_process=protein secretion by the type IV secretion system|0030255||IEA;inference=COORDINATES: protein motif:HMM:NF016238.7;locus_tag=YPIP275_RS11865;product=VirB8 family type IV secretion system protein;protein_id=WP_223290844.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 124645 125208 . - . ID=gene-YPIP275_RS11870;Name=YPIP275_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11870 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 124645 125208 . - 0 ID=cds-WP_000004673.1-2;Parent=gene-YPIP275_RS11870;Dbxref=GenBank:WP_000004673.1;Name=WP_000004673.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11870;product=hypothetical protein;protein_id=WP_000004673.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 125201 125629 . - . ID=gene-YPIP275_RS11875;Name=YPIP275_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11875 NZ_AAOS02000011.1 Protein Homology CDS 125201 125629 . - 0 ID=cds-WP_000988987.1-2;Parent=gene-YPIP275_RS11875;Dbxref=GenBank:WP_000988987.1;Name=WP_000988987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220990.1;locus_tag=YPIP275_RS11875;product=hypothetical protein;protein_id=WP_000988987.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 125626 125973 . - . ID=gene-YPIP275_RS11880;Name=YPIP275_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11880 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 125626 125973 . - 0 ID=cds-WP_000039129.1-2;Parent=gene-YPIP275_RS11880;Dbxref=GenBank:WP_000039129.1;Name=WP_000039129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11880;product=hypothetical protein;protein_id=WP_000039129.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 125985 127118 . - . ID=gene-YPIP275_RS11885;Name=YPIP275_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11885;old_locus_tag=YPIP275_2934 NZ_AAOS02000011.1 Protein Homology CDS 125985 127118 . - 0 ID=cds-WP_000225028.1-2;Parent=gene-YPIP275_RS11885;Dbxref=GenBank:WP_000225028.1;Name=WP_000225028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000258703.1;locus_tag=YPIP275_RS11885;product=hypothetical protein;protein_id=WP_000225028.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 127163 127357 . - . ID=gene-YPIP275_RS11890;Name=YPIP275_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11890;old_locus_tag=YPIP275_2935 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 127163 127357 . - 0 ID=cds-WP_000757530.1-2;Parent=gene-YPIP275_RS11890;Dbxref=GenBank:WP_000757530.1;Name=WP_000757530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11890;product=DUF2997 domain-containing protein;protein_id=WP_000757530.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 127406 127798 . - . ID=gene-YPIP275_RS11895;Name=YPIP275_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11895;old_locus_tag=YPIP275_2936 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 127406 127798 . - 0 ID=cds-WP_000018404.1-2;Parent=gene-YPIP275_RS11895;Dbxref=GenBank:WP_000018404.1;Name=WP_000018404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11895;product=hypothetical protein;protein_id=WP_000018404.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 127803 128141 . - . ID=gene-YPIP275_RS11900;Name=YPIP275_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11900;old_locus_tag=YPIP275_2937 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 127803 128141 . - 0 ID=cds-WP_011742553.1;Parent=gene-YPIP275_RS11900;Dbxref=GenBank:WP_011742553.1;Name=WP_011742553.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11900;product=hypothetical protein;protein_id=WP_011742553.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 128288 129751 . - . ID=gene-YPIP275_RS11905;Name=YPIP275_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11905;old_locus_tag=YPIP275_2938 NZ_AAOS02000011.1 Protein Homology CDS 128288 129751 . - 0 ID=cds-WP_001280522.1-2;Parent=gene-YPIP275_RS11905;Dbxref=GenBank:WP_001280522.1;Name=WP_001280522.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831363.1;locus_tag=YPIP275_RS11905;product=AAA family ATPase;protein_id=WP_001280522.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 129825 130757 . - . ID=gene-YPIP275_RS11910;Name=YPIP275_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11910;old_locus_tag=YPIP275_2939 NZ_AAOS02000011.1 Protein Homology CDS 129825 130757 . - 0 ID=cds-WP_000434071.1-2;Parent=gene-YPIP275_RS11910;Dbxref=GenBank:WP_000434071.1;Name=WP_000434071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000409412.1;locus_tag=YPIP275_RS11910;product=hypothetical protein;protein_id=WP_000434071.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 131319 131816 . - . ID=gene-YPIP275_RS11915;Name=YPIP275_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11915;old_locus_tag=YPIP275_2940 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 131319 131816 . - 0 ID=cds-WP_000062185.1-2;Parent=gene-YPIP275_RS11915;Dbxref=GenBank:WP_000062185.1;Name=WP_000062185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11915;product=hypothetical protein;protein_id=WP_000062185.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 131819 132307 . - . ID=gene-YPIP275_RS11920;Name=YPIP275_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11920 NZ_AAOS02000011.1 Protein Homology CDS 131819 132307 . - 0 ID=cds-WP_001273096.1-2;Parent=gene-YPIP275_RS11920;Dbxref=GenBank:WP_001273096.1;Name=WP_001273096.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019416.7;locus_tag=YPIP275_RS11920;product=DUF1643 domain-containing protein;protein_id=WP_001273096.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 132404 132739 . + . ID=gene-YPIP275_RS11925;Name=YPIP275_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11925;old_locus_tag=YPIP275_2941 NZ_AAOS02000011.1 Protein Homology CDS 132404 132739 . + 0 ID=cds-WP_000683476.1-2;Parent=gene-YPIP275_RS11925;Dbxref=GenBank:WP_000683476.1;Name=WP_000683476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001348526.1;locus_tag=YPIP275_RS11925;product=hypothetical protein;protein_id=WP_000683476.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 132754 133224 . - . ID=gene-YPIP275_RS11930;Name=YPIP275_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11930;old_locus_tag=YPIP275_2942 NZ_AAOS02000011.1 Protein Homology CDS 132754 133224 . - 0 ID=cds-WP_001281821.1-2;Parent=gene-YPIP275_RS11930;Dbxref=GenBank:WP_001281821.1;Name=WP_001281821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141685.1;locus_tag=YPIP275_RS11930;product=hypothetical protein;protein_id=WP_001281821.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 133217 133624 . - . ID=gene-YPIP275_RS28695;Name=YPIP275_RS28695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28695 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 133217 133624 . - 0 ID=cds-WP_366534731.1;Parent=gene-YPIP275_RS28695;Dbxref=GenBank:WP_366534731.1;Name=WP_366534731.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS28695;product=hypothetical protein;protein_id=WP_366534731.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 133599 133793 . - . ID=gene-YPIP275_RS28700;Name=YPIP275_RS28700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28700;old_locus_tag=YPIP275_2943 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 133599 133793 . - 0 ID=cds-WP_000343597.1-2;Parent=gene-YPIP275_RS28700;Dbxref=GenBank:WP_000343597.1;Name=WP_000343597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS28700;product=hypothetical protein;protein_id=WP_000343597.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 133821 134012 . + . ID=gene-YPIP275_RS28705;Name=YPIP275_RS28705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28705 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 133821 134012 . + 0 ID=cds-WP_014342197.1-2;Parent=gene-YPIP275_RS28705;Dbxref=GenBank:WP_014342197.1;Name=WP_014342197.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS28705;product=hypothetical protein;protein_id=WP_014342197.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 134134 134682 . - . ID=gene-YPIP275_RS11950;Name=YPIP275_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11950;old_locus_tag=YPIP275_2944 NZ_AAOS02000011.1 Protein Homology CDS 134134 134682 . - 0 ID=cds-WP_001061574.1-2;Parent=gene-YPIP275_RS11950;Dbxref=GenBank:WP_001061574.1;Name=WP_001061574.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049042.3;locus_tag=YPIP275_RS11950;product=transcriptional regulator;protein_id=WP_001061574.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 134845 135195 . + . ID=gene-YPIP275_RS11955;Name=YPIP275_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11955 NZ_AAOS02000011.1 Protein Homology CDS 134845 135195 . + 0 ID=cds-WP_000270043.1-2;Parent=gene-YPIP275_RS11955;Dbxref=GenBank:WP_000270043.1;Name=WP_000270043.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000270043.1;locus_tag=YPIP275_RS11955;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000270043.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 135200 135502 . + . ID=gene-YPIP275_RS11960;Name=proR;gbkey=Gene;gene=proR;gene_biotype=protein_coding;locus_tag=YPIP275_RS11960;old_locus_tag=YPIP275_2945 NZ_AAOS02000011.1 Protein Homology CDS 135200 135502 . + 0 ID=cds-WP_000124640.1-2;Parent=gene-YPIP275_RS11960;Dbxref=GenBank:WP_000124640.1;Name=WP_000124640.1;gbkey=CDS;gene=proR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533828.1;locus_tag=YPIP275_RS11960;product=transcriptional regulator ProR;protein_id=WP_000124640.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 135529 135822 . - . ID=gene-YPIP275_RS11965;Name=YPIP275_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11965 NZ_AAOS02000011.1 Protein Homology CDS 135529 135822 . - 0 ID=cds-WP_001239997.1-2;Parent=gene-YPIP275_RS11965;Dbxref=GenBank:WP_001239997.1;Name=WP_001239997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141680.1;locus_tag=YPIP275_RS11965;product=chromosome segregation protein ParM;protein_id=WP_001239997.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 135910 136182 . - . ID=gene-YPIP275_RS11970;Name=YPIP275_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11970;old_locus_tag=YPIP275_2947 NZ_AAOS02000011.1 Protein Homology CDS 135910 136182 . - 0 ID=cds-WP_001043047.1-2;Parent=gene-YPIP275_RS11970;Dbxref=GenBank:WP_001043047.1;Name=WP_001043047.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1;locus_tag=YPIP275_RS11970;product=HU family DNA-binding protein;protein_id=WP_001043047.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 136240 136767 . - . ID=gene-YPIP275_RS11975;Name=YPIP275_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11975;old_locus_tag=YPIP275_2948 NZ_AAOS02000011.1 Protein Homology CDS 136240 136767 . - 0 ID=cds-WP_001236377.1-2;Parent=gene-YPIP275_RS11975;Dbxref=GenBank:WP_001236377.1;Name=WP_001236377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141678.1;locus_tag=YPIP275_RS11975;product=thermonuclease family protein;protein_id=WP_001236377.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 136784 136972 . - . ID=gene-YPIP275_RS11980;Name=YPIP275_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11980 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 136784 136972 . - 0 ID=cds-WP_001270411.1-2;Parent=gene-YPIP275_RS11980;Dbxref=GenBank:WP_001270411.1;Name=WP_001270411.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11980;product=hypothetical protein;protein_id=WP_001270411.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 136998 137855 . - . ID=gene-YPIP275_RS11985;Name=YPIP275_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11985;old_locus_tag=YPIP275_2949 NZ_AAOS02000011.1 Protein Homology CDS 136998 137855 . - 0 ID=cds-WP_001167032.1-2;Parent=gene-YPIP275_RS11985;Dbxref=GenBank:WP_001167032.1;Name=WP_001167032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001167036.1;locus_tag=YPIP275_RS11985;product=hypothetical protein;protein_id=WP_001167032.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 137842 138072 . - . ID=gene-YPIP275_RS11990;Name=YPIP275_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11990 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 137842 138072 . - 0 ID=cds-WP_000972663.1-2;Parent=gene-YPIP275_RS11990;Dbxref=GenBank:WP_000972663.1;Name=WP_000972663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS11990;product=hypothetical protein;protein_id=WP_000972663.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 138072 138590 . - . ID=gene-YPIP275_RS11995;Name=YPIP275_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11995;old_locus_tag=YPIP275_2951 NZ_AAOS02000011.1 Protein Homology CDS 138072 138590 . - 0 ID=cds-WP_000210756.1-2;Parent=gene-YPIP275_RS11995;Dbxref=GenBank:WP_000210756.1;Name=WP_000210756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210755.1;locus_tag=YPIP275_RS11995;product=nitrite reductase;protein_id=WP_000210756.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 138587 139033 . - . ID=gene-YPIP275_RS12000;Name=YPIP275_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12000;old_locus_tag=YPIP275_2953 NZ_AAOS02000011.1 Protein Homology CDS 138587 139033 . - 0 ID=cds-WP_000919345.1-2;Parent=gene-YPIP275_RS12000;Dbxref=GenBank:WP_000919345.1;Name=WP_000919345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141675.1;locus_tag=YPIP275_RS12000;product=Fe3+-siderophore ABC transporter permease;protein_id=WP_000919345.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 139033 139392 . - . ID=gene-YPIP275_RS12005;Name=YPIP275_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12005;old_locus_tag=YPIP275_2954 NZ_AAOS02000011.1 Protein Homology CDS 139033 139392 . - 0 ID=cds-WP_000422768.1-2;Parent=gene-YPIP275_RS12005;Dbxref=GenBank:WP_000422768.1;Name=WP_000422768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141674.1;locus_tag=YPIP275_RS12005;product=hypothetical protein;protein_id=WP_000422768.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 139449 139877 . - . ID=gene-YPIP275_RS12010;Name=YPIP275_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12010 NZ_AAOS02000011.1 Protein Homology CDS 139449 139877 . - 0 ID=cds-WP_000591074.1-2;Parent=gene-YPIP275_RS12010;Dbxref=GenBank:WP_000591074.1;Name=WP_000591074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000591074.1;locus_tag=YPIP275_RS12010;product=hypothetical protein;protein_id=WP_000591074.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 139911 140771 . - . ID=gene-YPIP275_RS12015;Name=YPIP275_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12015;old_locus_tag=YPIP275_2956 NZ_AAOS02000011.1 Protein Homology CDS 139911 140771 . - 0 ID=cds-WP_000139698.1-2;Parent=gene-YPIP275_RS12015;Dbxref=GenBank:WP_000139698.1;Name=WP_000139698.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141672.1;locus_tag=YPIP275_RS12015;product=DsbA family protein;protein_id=WP_000139698.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 140787 141746 . - . ID=gene-YPIP275_RS12020;Name=YPIP275_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12020;old_locus_tag=YPIP275_2957 NZ_AAOS02000011.1 Protein Homology CDS 140787 141746 . - 0 ID=cds-WP_000829616.1-2;Parent=gene-YPIP275_RS12020;Dbxref=GenBank:WP_000829616.1;Name=WP_000829616.1;Ontology_term=GO:0006508,GO:0051604,GO:0008236,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141671.1;locus_tag=YPIP275_RS12020;product=S49 family peptidase;protein_id=WP_000829616.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 141746 142600 . - . ID=gene-YPIP275_RS12025;Name=YPIP275_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12025;old_locus_tag=YPIP275_2958 NZ_AAOS02000011.1 Protein Homology CDS 141746 142600 . - 0 ID=cds-WP_000539392.1-2;Parent=gene-YPIP275_RS12025;Dbxref=GenBank:WP_000539392.1;Name=WP_000539392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141670.1;locus_tag=YPIP275_RS12025;product=hypothetical protein;protein_id=WP_000539392.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 142605 142919 . - . ID=gene-YPIP275_RS12030;Name=YPIP275_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12030;old_locus_tag=YPIP275_2959 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 142605 142919 . - 0 ID=cds-WP_000902149.1;Parent=gene-YPIP275_RS12030;Dbxref=GenBank:WP_000902149.1;Name=WP_000902149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS12030;product=hypothetical protein;protein_id=WP_000902149.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 142909 143382 . - . ID=gene-YPIP275_RS12035;Name=YPIP275_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12035 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 142909 143382 . - 0 ID=cds-WP_000057877.1-2;Parent=gene-YPIP275_RS12035;Dbxref=GenBank:WP_000057877.1;Name=WP_000057877.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS12035;product=hypothetical protein;protein_id=WP_000057877.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 143479 144000 . - . ID=gene-YPIP275_RS12040;Name=YPIP275_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12040 NZ_AAOS02000011.1 Protein Homology CDS 143479 144000 . - 0 ID=cds-WP_000805800.1-2;Parent=gene-YPIP275_RS12040;Dbxref=GenBank:WP_000805800.1;Name=WP_000805800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648875.1;locus_tag=YPIP275_RS12040;product=hypothetical protein;protein_id=WP_000805800.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 144003 144524 . - . ID=gene-YPIP275_RS12045;Name=YPIP275_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12045;old_locus_tag=YPIP275_2961 NZ_AAOS02000011.1 Protein Homology CDS 144003 144524 . - 0 ID=cds-WP_000393785.1-2;Parent=gene-YPIP275_RS12045;Dbxref=GenBank:WP_000393785.1;Name=WP_000393785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000393785.1;locus_tag=YPIP275_RS12045;product=hypothetical protein;protein_id=WP_000393785.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 144529 145137 . - . ID=gene-YPIP275_RS12050;Name=YPIP275_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12050;old_locus_tag=YPIP275_2962 NZ_AAOS02000011.1 Protein Homology CDS 144529 145137 . - 0 ID=cds-WP_000849071.1-2;Parent=gene-YPIP275_RS12050;Dbxref=GenBank:WP_000849071.1;Name=WP_000849071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141664.1;locus_tag=YPIP275_RS12050;product=hypothetical protein;protein_id=WP_000849071.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 145406 146521 . + . ID=gene-YPIP275_RS12055;Name=YPIP275_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12055;old_locus_tag=YPIP275_2964 NZ_AAOS02000011.1 Protein Homology CDS 145406 146521 . + 0 ID=cds-WP_000946102.1-2;Parent=gene-YPIP275_RS12055;Dbxref=GenBank:WP_000946102.1;Name=WP_000946102.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220951.1;locus_tag=YPIP275_RS12055;product=phosphoadenosine phosphosulfate reductase domain-containing protein;protein_id=WP_000946102.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 146539 146973 . + . ID=gene-YPIP275_RS12060;Name=YPIP275_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12060 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 146539 146973 . + 0 ID=cds-WP_000883925.1-2;Parent=gene-YPIP275_RS12060;Dbxref=GenBank:WP_000883925.1;Name=WP_000883925.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS12060;product=hypothetical protein;protein_id=WP_000883925.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 147060 147212 . - . ID=gene-YPIP275_RS28710;Name=YPIP275_RS28710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28710;old_locus_tag=YPIP275_2965 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 147060 147212 . - 0 ID=cds-WP_001337765.1-2;Parent=gene-YPIP275_RS28710;Dbxref=GenBank:WP_001337765.1;Name=WP_001337765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS28710;product=hypothetical protein;protein_id=WP_001337765.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 148010 149074 . - . ID=gene-YPIP275_RS12070;Name=YPIP275_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12070;old_locus_tag=YPIP275_2966 NZ_AAOS02000011.1 Protein Homology CDS 148010 149074 . - 0 ID=cds-WP_000044787.1;Parent=gene-YPIP275_RS12070;Dbxref=GenBank:WP_000044787.1;Name=WP_000044787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141662.1;locus_tag=YPIP275_RS12070;product=RepB family plasmid replication initiator protein;protein_id=WP_000044787.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 149095 149382 . - . ID=gene-YPIP275_RS12075;Name=YPIP275_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12075;old_locus_tag=YPIP275_2968 NZ_AAOS02000011.1 Protein Homology CDS 149095 149382 . - 0 ID=cds-WP_000127321.1-2;Parent=gene-YPIP275_RS12075;Dbxref=GenBank:WP_000127321.1;Name=WP_000127321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141661.1;locus_tag=YPIP275_RS12075;product=hypothetical protein;protein_id=WP_000127321.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 149387 149926 . - . ID=gene-YPIP275_RS12080;Name=mobI;gbkey=Gene;gene=mobI;gene_biotype=protein_coding;locus_tag=YPIP275_RS12080 NZ_AAOS02000011.1 Protein Homology CDS 149387 149926 . - 0 ID=cds-WP_001447712.1-2;Parent=gene-YPIP275_RS12080;Dbxref=GenBank:WP_001447712.1;Name=WP_001447712.1;gbkey=CDS;gene=mobI;inference=COORDINATES: protein motif:HMM:NF039622.6;locus_tag=YPIP275_RS12080;product=conjugative transfer protein MobI(A/C);protein_id=WP_001447712.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 150425 151408 . + . ID=gene-YPIP275_RS12085;Name=YPIP275_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12085;old_locus_tag=YPIP275_2969 NZ_AAOS02000011.1 Protein Homology CDS 150425 151408 . + 0 ID=cds-WP_000077458.1-2;Parent=gene-YPIP275_RS12085;Dbxref=GenBank:WP_000077458.1;Name=WP_000077458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001963822.1;locus_tag=YPIP275_RS12085;product=ParM/StbA family protein;protein_id=WP_000077458.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 151425 151718 . + . ID=gene-YPIP275_RS12090;Name=YPIP275_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12090 NZ_AAOS02000011.1 Protein Homology CDS 151425 151718 . + 0 ID=cds-WP_000919078.1-2;Parent=gene-YPIP275_RS12090;Dbxref=GenBank:WP_000919078.1;Name=WP_000919078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141657.1;locus_tag=YPIP275_RS12090;product=hypothetical protein;protein_id=WP_000919078.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 151720 152139 . + . ID=gene-YPIP275_RS12095;Name=YPIP275_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12095;old_locus_tag=YPIP275_2970 NZ_AAOS02000011.1 Protein Homology CDS 151720 152139 . + 0 ID=cds-WP_000651490.1-2;Parent=gene-YPIP275_RS12095;Dbxref=GenBank:WP_000651490.1;Name=WP_000651490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000651491.1;locus_tag=YPIP275_RS12095;product=H-NS family histone-like protein;protein_id=WP_000651490.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 152199 152750 . - . ID=gene-YPIP275_RS12100;Name=YPIP275_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12100 NZ_AAOS02000011.1 Protein Homology CDS 152199 152750 . - 0 ID=cds-WP_001020646.1-2;Parent=gene-YPIP275_RS12100;Dbxref=GenBank:WP_001020646.1;Name=WP_001020646.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001020646.1;locus_tag=YPIP275_RS12100;product=FlhC family transcriptional regulator;protein_id=WP_001020646.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 152747 153412 . - . ID=gene-YPIP275_RS12105;Name=YPIP275_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12105;old_locus_tag=YPIP275_2971 NZ_AAOS02000011.1 Protein Homology CDS 152747 153412 . - 0 ID=cds-WP_002210562.1;Parent=gene-YPIP275_RS12105;Dbxref=GenBank:WP_002210562.1;Name=WP_002210562.1;Ontology_term=GO:0044780,GO:0045893;gbkey=CDS;go_process=bacterial-type flagellum assembly|0044780||IEA,positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: protein motif:HMM:NF017094.8;locus_tag=YPIP275_RS12105;product=flagellar transcriptional regulator FlhD;protein_id=WP_002210562.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 153366 153899 . - . ID=gene-YPIP275_RS12110;Name=YPIP275_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12110 NZ_AAOS02000011.1 Protein Homology CDS 153366 153899 . - 0 ID=cds-WP_000790610.1-2;Parent=gene-YPIP275_RS12110;Dbxref=GenBank:WP_000790610.1;Name=WP_000790610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001938477.1;locus_tag=YPIP275_RS12110;product=transglycosylase SLT domain-containing protein;protein_id=WP_000790610.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 153899 154171 . - . ID=gene-YPIP275_RS12115;Name=YPIP275_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12115 NZ_AAOS02000011.1 Protein Homology CDS 153899 154171 . - 0 ID=cds-WP_000356489.1-2;Parent=gene-YPIP275_RS12115;Dbxref=GenBank:WP_000356489.1;Name=WP_000356489.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF025073.6;locus_tag=YPIP275_RS12115;product=helix-turn-helix domain-containing protein;protein_id=WP_000356489.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 154887 155249 . + . ID=gene-YPIP275_RS12120;Name=YPIP275_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12120 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 154887 155249 . + 0 ID=cds-WP_000683483.1-2;Parent=gene-YPIP275_RS12120;Dbxref=GenBank:WP_000683483.1;Name=WP_000683483.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS12120;product=hypothetical protein;protein_id=WP_000683483.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 155287 158901 . - . ID=gene-YPIP275_RS12125;Name=YPIP275_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12125;old_locus_tag=YPIP275_2973 NZ_AAOS02000011.1 Protein Homology CDS 155287 158901 . - 0 ID=cds-WP_000534551.1-2;Parent=gene-YPIP275_RS12125;Dbxref=GenBank:WP_000534551.1;Name=WP_000534551.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019530.7;locus_tag=YPIP275_RS12125;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=WP_000534551.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 158914 160347 . - . ID=gene-YPIP275_RS12130;Name=YPIP275_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12130;old_locus_tag=YPIP275_2974 NZ_AAOS02000011.1 Protein Homology CDS 158914 160347 . - 0 ID=cds-WP_000256129.1-2;Parent=gene-YPIP275_RS12130;Dbxref=GenBank:WP_000256129.1;Name=WP_000256129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005507645.1;locus_tag=YPIP275_RS12130;product=conjugal transfer protein TraH;protein_id=WP_000256129.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 160349 161365 . - . ID=gene-YPIP275_RS12135;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=YPIP275_RS12135;old_locus_tag=YPIP275_2975 NZ_AAOS02000011.1 Protein Homology CDS 160349 161365 . - 0 ID=cds-WP_000749520.1;Parent=gene-YPIP275_RS12135;Dbxref=GenBank:WP_000749520.1;Name=WP_000749520.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001209375.1;locus_tag=YPIP275_RS12135;product=conjugal transfer protein TraF;protein_id=WP_000749520.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 161500 163011 . - . ID=gene-YPIP275_RS12140;Name=YPIP275_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12140;old_locus_tag=YPIP275_2976 NZ_AAOS02000011.1 Protein Homology CDS 161500 163011 . - 0 ID=cds-WP_000811656.1-2;Parent=gene-YPIP275_RS12140;Dbxref=GenBank:WP_000811656.1;Name=WP_000811656.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000811658.1;locus_tag=YPIP275_RS12140;product=UvrD-helicase domain-containing protein;protein_id=WP_000811656.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 163020 163223 . - . ID=gene-YPIP275_RS12145;Name=YPIP275_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12145 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 163020 163223 . - 0 ID=cds-WP_235214135.1-2;Parent=gene-YPIP275_RS12145;Dbxref=GenBank:WP_235214135.1;Name=WP_235214135.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS12145;product=hypothetical protein;protein_id=WP_235214135.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 163298 164338 . - . ID=gene-YPIP275_RS12150;Name=YPIP275_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12150;old_locus_tag=YPIP275_2977 NZ_AAOS02000011.1 Protein Homology CDS 163298 164338 . - 0 ID=cds-WP_000101568.1-2;Parent=gene-YPIP275_RS12150;Dbxref=GenBank:WP_000101568.1;Name=WP_000101568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141651.1;locus_tag=YPIP275_RS12150;product=DNA-binding protein;protein_id=WP_000101568.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 164500 165375 . - . ID=gene-YPIP275_RS12155;Name=YPIP275_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12155;old_locus_tag=YPIP275_2978 NZ_AAOS02000011.1 Protein Homology CDS 164500 165375 . - 0 ID=cds-WP_001097010.1-2;Parent=gene-YPIP275_RS12155;Dbxref=GenBank:WP_001097010.1;Name=WP_001097010.1;Ontology_term=GO:0006274;gbkey=CDS;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221075.1;locus_tag=YPIP275_RS12155;product=DNA replication terminus site-binding protein;protein_id=WP_001097010.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 165702 166193 . - . ID=gene-YPIP275_RS12160;Name=YPIP275_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12160;old_locus_tag=YPIP275_2979 NZ_AAOS02000011.1 Protein Homology CDS 165702 166193 . - 0 ID=cds-WP_000139717.1-2;Parent=gene-YPIP275_RS12160;Dbxref=GenBank:WP_000139717.1;Name=WP_000139717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013141613.1;locus_tag=YPIP275_RS12160;product=hypothetical protein;protein_id=WP_000139717.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 166190 167059 . - . ID=gene-YPIP275_RS12165;Name=YPIP275_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12165;old_locus_tag=YPIP275_2980 NZ_AAOS02000011.1 Protein Homology CDS 166190 167059 . - 0 ID=cds-WP_000997323.1-2;Parent=gene-YPIP275_RS12165;Dbxref=GenBank:WP_000997323.1;Name=WP_000997323.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187418.1;locus_tag=YPIP275_RS12165;product=3'-5' exonuclease;protein_id=WP_000997323.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 167064 168074 . - . ID=gene-YPIP275_RS12170;Name=YPIP275_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12170;old_locus_tag=YPIP275_2981 NZ_AAOS02000011.1 Protein Homology CDS 167064 168074 . - 0 ID=cds-WP_000543934.1-2;Parent=gene-YPIP275_RS12170;Dbxref=GenBank:WP_000543934.1;Name=WP_000543934.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367910.1;locus_tag=YPIP275_RS12170;product=tyrosine-type recombinase/integrase;protein_id=WP_000543934.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 168077 168613 . - . ID=gene-YPIP275_RS12175;Name=YPIP275_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12175;old_locus_tag=YPIP275_2982 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 168077 168613 . - 0 ID=cds-WP_000949433.1-2;Parent=gene-YPIP275_RS12175;Dbxref=GenBank:WP_000949433.1;Name=WP_000949433.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS12175;product=protein-tyrosine phosphatase family protein;protein_id=WP_000949433.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 168912 169193 . - . ID=gene-YPIP275_RS12185;Name=YPIP275_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12185;old_locus_tag=YPIP275_2983 NZ_AAOS02000011.1 Protein Homology CDS 168912 169193 . - 0 ID=cds-WP_000575657.1-2;Parent=gene-YPIP275_RS12185;Dbxref=GenBank:WP_000575657.1;Name=WP_000575657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243801.1;locus_tag=YPIP275_RS12185;product=hypothetical protein;protein_id=WP_000575657.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 169455 170057 . + . ID=gene-YPIP275_RS12190;Name=YPIP275_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12190;old_locus_tag=YPIP275_2984 NZ_AAOS02000011.1 Protein Homology CDS 169455 170057 . + 0 ID=cds-WP_000278322.1-2;Parent=gene-YPIP275_RS12190;Dbxref=GenBank:WP_000278322.1;Name=WP_000278322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000278323.1;locus_tag=YPIP275_RS12190;product=hypothetical protein;protein_id=WP_000278322.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 170073 170525 . - . ID=gene-YPIP275_RS12195;Name=YPIP275_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12195;old_locus_tag=YPIP275_2985 NZ_AAOS02000011.1 Protein Homology CDS 170073 170525 . - 0 ID=cds-WP_000791469.1-2;Parent=gene-YPIP275_RS12195;Dbxref=GenBank:WP_000791469.1;Name=WP_000791469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553092.1;locus_tag=YPIP275_RS12195;product=hypothetical protein;protein_id=WP_000791469.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 170692 170991 . - . ID=gene-YPIP275_RS12200;Name=YPIP275_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12200 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 170692 170991 . - 0 ID=cds-WP_011872911.1-2;Parent=gene-YPIP275_RS12200;Dbxref=GenBank:WP_011872911.1;Name=WP_011872911.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS12200;product=hypothetical protein;protein_id=WP_011872911.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 171039 171281 . - . ID=gene-YPIP275_RS12205;Name=YPIP275_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12205 NZ_AAOS02000011.1 GeneMarkS-2+ CDS 171039 171281 . - 0 ID=cds-WP_000750746.1-2;Parent=gene-YPIP275_RS12205;Dbxref=GenBank:WP_000750746.1;Name=WP_000750746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS12205;product=hypothetical protein;protein_id=WP_000750746.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 171286 171558 . - . ID=gene-YPIP275_RS12210;Name=YPIP275_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12210;old_locus_tag=YPIP275_2986 NZ_AAOS02000011.1 Protein Homology CDS 171286 171558 . - 0 ID=cds-WP_000787563.1-2;Parent=gene-YPIP275_RS12210;Dbxref=GenBank:WP_000787563.1;Name=WP_000787563.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033691.1;locus_tag=YPIP275_RS12210;product=MafI family immunity protein;protein_id=WP_000787563.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 171555 172448 . - . ID=gene-YPIP275_RS12215;Name=YPIP275_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12215;old_locus_tag=YPIP275_2987 NZ_AAOS02000011.1 Protein Homology CDS 171555 172448 . - 0 ID=cds-WP_436296050.1;Parent=gene-YPIP275_RS12215;Dbxref=GenBank:WP_436296050.1;Name=WP_436296050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210565.1;locus_tag=YPIP275_RS12215;product=RHS repeat-associated core domain-containing protein;protein_id=WP_436296050.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 172593 175559 . - . ID=gene-YPIP275_RS12220;Name=YPIP275_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12220;old_locus_tag=YPIP275_2988 NZ_AAOS02000011.1 Protein Homology CDS 172593 175559 . - 0 ID=cds-WP_001138064.1-2;Parent=gene-YPIP275_RS12220;Dbxref=GenBank:WP_001138064.1;Name=WP_001138064.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138064.1;locus_tag=YPIP275_RS12220;product=Tn3-like element TnAs3 family transposase;protein_id=WP_001138064.1;transl_table=11 NZ_AAOS02000011.1 RefSeq pseudogene 175562 175717 . - . ID=gene-YPIP275_RS27355;Name=YPIP275_RS27355;end_range=175717,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS27355;old_locus_tag=YPIP275_2989;partial=true;pseudo=true NZ_AAOS02000011.1 Protein Homology CDS 175562 175717 . - 0 ID=cds-YPIP275_RS27355;Parent=gene-YPIP275_RS27355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=175717,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147566.1;locus_tag=YPIP275_RS27355;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 175782 176486 . + . ID=gene-YPIP275_RS12225;Name=YPIP275_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12225;old_locus_tag=YPIP275_2991 NZ_AAOS02000011.1 Protein Homology CDS 175782 176486 . + 0 ID=cds-WP_001067855.1-22;Parent=gene-YPIP275_RS12225;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=YPIP275_RS12225;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_AAOS02000011.1 RefSeq pseudogene 176539 176652 . - . ID=gene-YPIP275_RS28715;Name=YPIP275_RS28715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28715;partial=true;pseudo=true;start_range=.,176539 NZ_AAOS02000011.1 Protein Homology CDS 176539 176652 . - 0 ID=cds-YPIP275_RS28715;Parent=gene-YPIP275_RS28715;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015874454.1;locus_tag=YPIP275_RS28715;partial=true;product=recombinase family protein;pseudo=true;start_range=.,176539;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 176783 177133 . - . ID=gene-YPIP275_RS12230;Name=YPIP275_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12230 NZ_AAOS02000011.1 Protein Homology CDS 176783 177133 . - 0 ID=cds-WP_000454193.1;Parent=gene-YPIP275_RS12230;Dbxref=GenBank:WP_000454193.1;Name=WP_000454193.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023237.7;locus_tag=YPIP275_RS12230;product=DUF3330 domain-containing protein;protein_id=WP_000454193.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 177336 178349 . - . ID=gene-YPIP275_RS12235;Name=intI1;gbkey=Gene;gene=intI1;gene_biotype=protein_coding;locus_tag=YPIP275_RS12235;old_locus_tag=YPIP275_2993 NZ_AAOS02000011.1 Protein Homology CDS 177336 178349 . - 0 ID=cds-WP_000845048.1-2;Parent=gene-YPIP275_RS12235;Dbxref=GenBank:WP_000845048.1;Name=WP_000845048.1;gbkey=CDS;gene=intI1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012077405.1;locus_tag=YPIP275_RS12235;product=class 1 integron integrase IntI1;protein_id=WP_000845048.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 178498 179289 . + . ID=gene-YPIP275_RS12240;Name=YPIP275_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12240;old_locus_tag=YPIP275_2994 NZ_AAOS02000011.1 Protein Homology CDS 178498 179289 . + 0 ID=cds-WP_001261740.1-2;Parent=gene-YPIP275_RS12240;Dbxref=GenBank:WP_001261740.1;Name=WP_001261740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014325834.1;locus_tag=YPIP275_RS12240;product=ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2;protein_id=WP_001261740.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 179453 179800 . + . ID=gene-YPIP275_RS12245;Name=YPIP275_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12245 NZ_AAOS02000011.1 Protein Homology CDS 179453 179800 . + 0 ID=cds-WP_000679427.1-2;Parent=gene-YPIP275_RS12245;Dbxref=GenBank:WP_000679427.1;Name=WP_000679427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000679427.1;locus_tag=YPIP275_RS12245;product=quaternary ammonium compound efflux SMR transporter QacE delta 1;protein_id=WP_000679427.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 179794 180633 . + . ID=gene-YPIP275_RS12250;Name=sul1;gbkey=Gene;gene=sul1;gene_biotype=protein_coding;locus_tag=YPIP275_RS12250;old_locus_tag=YPIP275_2995 NZ_AAOS02000011.1 Protein Homology CDS 179794 180633 . + 0 ID=cds-WP_000259031.1-2;Parent=gene-YPIP275_RS12250;Dbxref=GenBank:WP_000259031.1;Name=WP_000259031.1;gbkey=CDS;gene=sul1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000259031.1;locus_tag=YPIP275_RS12250;product=sulfonamide-resistant dihydropteroate synthase Sul1;protein_id=WP_000259031.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 180761 181261 . + . ID=gene-YPIP275_RS12255;Name=YPIP275_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12255 NZ_AAOS02000011.1 Protein Homology CDS 180761 181261 . + 0 ID=cds-WP_000376623.1-2;Parent=gene-YPIP275_RS12255;Dbxref=GenBank:WP_000376623.1;Name=WP_000376623.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194535.1;locus_tag=YPIP275_RS12255;product=GNAT family N-acetyltransferase;protein_id=WP_000376623.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 181437 182222 . - . ID=gene-YPIP275_RS12260;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS12260;old_locus_tag=YPIP275_2996 NZ_AAOS02000011.1 Protein Homology CDS 181437 182222 . - 0 ID=cds-WP_000983249.1-2;Parent=gene-YPIP275_RS12260;Dbxref=GenBank:WP_000983249.1;Name=WP_000983249.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000983249.1;locus_tag=YPIP275_RS12260;product=IS21-like element IS1326 family helper ATPase IstB;protein_id=WP_000983249.1;transl_table=11 NZ_AAOS02000011.1 RefSeq pseudogene 182209 182922 . - . ID=gene-YPIP275_RS12265;Name=istA;end_range=182922,.;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=YPIP275_RS12265;old_locus_tag=YPIP275_2997;partial=true;pseudo=true NZ_AAOS02000011.1 Protein Homology CDS 182209 182922 . - 0 ID=cds-YPIP275_RS12265;Parent=gene-YPIP275_RS12265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=182922,.;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001324342.1;locus_tag=YPIP275_RS12265;partial=true;product=IS21-like element IS1326 family transposase;pseudo=true;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 182966 183670 . - . ID=gene-YPIP275_RS12270;Name=YPIP275_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12270;old_locus_tag=YPIP275_2998 NZ_AAOS02000011.1 Protein Homology CDS 182966 183670 . - 0 ID=cds-WP_001067855.1-23;Parent=gene-YPIP275_RS12270;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=YPIP275_RS12270;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 183682 184338 . - . ID=gene-YPIP275_RS12275;Name=tetR(D);gbkey=Gene;gene=tetR(D);gene_biotype=protein_coding;locus_tag=YPIP275_RS12275;old_locus_tag=YPIP275_2999 NZ_AAOS02000011.1 Protein Homology CDS 183682 184338 . - 0 ID=cds-WP_000113282.1-4;Parent=gene-YPIP275_RS12275;Dbxref=GenBank:WP_000113282.1;Name=WP_000113282.1;gbkey=CDS;gene=tetR(D);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113282.1;locus_tag=YPIP275_RS12275;product=tetracycline resistance transcriptional repressor TetR(D);protein_id=WP_000113282.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 184434 185618 . + . ID=gene-YPIP275_RS12280;Name=tet(D);gbkey=Gene;gene=tet(D);gene_biotype=protein_coding;locus_tag=YPIP275_RS12280;old_locus_tag=YPIP275_3000 NZ_AAOS02000011.1 Protein Homology CDS 184434 185618 . + 0 ID=cds-WP_001039466.1-4;Parent=gene-YPIP275_RS12280;Dbxref=GenBank:WP_001039466.1;Name=WP_001039466.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(D);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001039466.1;locus_tag=YPIP275_RS12280;product=tetracycline efflux MFS transporter Tet(D);protein_id=WP_001039466.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 185713 186822 . + . ID=gene-YPIP275_RS12285;Name=YPIP275_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12285;old_locus_tag=YPIP275_3001 NZ_AAOS02000011.1 Protein Homology CDS 185713 186822 . + 0 ID=cds-WP_000842134.1-4;Parent=gene-YPIP275_RS12285;Dbxref=GenBank:WP_000842134.1;Name=WP_000842134.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308438.1;locus_tag=YPIP275_RS12285;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_000842134.1;transl_table=11 NZ_AAOS02000011.1 RefSeq pseudogene 186844 187266 . + . ID=gene-YPIP275_RS12290;Name=YPIP275_RS12290;end_range=187266,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS12290;old_locus_tag=YPIP275_3002;partial=true;pseudo=true NZ_AAOS02000011.1 Protein Homology CDS 186844 187266 . + 0 ID=cds-YPIP275_RS12290;Parent=gene-YPIP275_RS12290;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=187266,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827456.1;locus_tag=YPIP275_RS12290;partial=true;product=alpha/beta hydrolase-fold protein;pseudo=true;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 187312 188016 . - . ID=gene-YPIP275_RS12295;Name=YPIP275_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12295;old_locus_tag=YPIP275_3003 NZ_AAOS02000011.1 Protein Homology CDS 187312 188016 . - 0 ID=cds-WP_001067855.1-24;Parent=gene-YPIP275_RS12295;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=YPIP275_RS12295;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_AAOS02000011.1 RefSeq pseudogene 188071 188958 . + . ID=gene-YPIP275_RS12300;Name=YPIP275_RS12300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS12300;old_locus_tag=YPIP275_3004;partial=true;pseudo=true;start_range=.,188071 NZ_AAOS02000011.1 Protein Homology CDS 188071 188958 . + 0 ID=cds-YPIP275_RS12300;Parent=gene-YPIP275_RS12300;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151612.1;locus_tag=YPIP275_RS12300;partial=true;product=oligosaccharide MFS transporter;pseudo=true;start_range=.,188071;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 188989 190077 . - . ID=gene-YPIP275_RS12305;Name=YPIP275_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12305;old_locus_tag=YPIP275_3005 NZ_AAOS02000011.1 Protein Homology CDS 188989 190077 . - 0 ID=cds-WP_001620097.1-4;Parent=gene-YPIP275_RS12305;Dbxref=GenBank:WP_001620097.1;Name=WP_001620097.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226824.1;locus_tag=YPIP275_RS12305;product=AAA family ATPase;protein_id=WP_001620097.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 190164 190424 . - . ID=gene-YPIP275_RS12310;Name=YPIP275_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12310;old_locus_tag=YPIP275_3006 NZ_AAOS02000011.1 Protein Homology CDS 190164 190424 . - 0 ID=cds-WP_001620096.1-4;Parent=gene-YPIP275_RS12310;Dbxref=GenBank:WP_001620096.1;Name=WP_001620096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904006.1;locus_tag=YPIP275_RS12310;product=hypothetical protein;protein_id=WP_001620096.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 190722 191582 . + . ID=gene-YPIP275_RS12315;Name=YPIP275_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12315;old_locus_tag=YPIP275_3007 NZ_AAOS02000011.1 Protein Homology CDS 190722 191582 . + 0 ID=cds-WP_001620095.1-4;Parent=gene-YPIP275_RS12315;Dbxref=GenBank:WP_001620095.1;Name=WP_001620095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001620095.1;locus_tag=YPIP275_RS12315;product=broad-spectrum class A beta-lactamase SHV-1;protein_id=WP_001620095.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 191603 192364 . - . ID=gene-YPIP275_RS12320;Name=YPIP275_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS12320;old_locus_tag=YPIP275_3008 NZ_AAOS02000011.1 Protein Homology CDS 191603 192364 . - 0 ID=cds-WP_002210513.1-4;Parent=gene-YPIP275_RS12320;Dbxref=GenBank:WP_002210513.1;Name=WP_002210513.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226821.1;locus_tag=YPIP275_RS12320;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_002210513.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 192625 193527 . + . ID=gene-YPIP275_RS12325;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=YPIP275_RS12325;old_locus_tag=YPIP275_3009 NZ_AAOS02000011.1 Protein Homology CDS 192625 193527 . + 0 ID=cds-WP_002210514.1-4;Parent=gene-YPIP275_RS12325;Dbxref=GenBank:WP_002210514.1;Name=WP_002210514.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226820.1;locus_tag=YPIP275_RS12325;product=L-threonate dehydrogenase;protein_id=WP_002210514.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 193539 194804 . + . ID=gene-YPIP275_RS12330;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=YPIP275_RS12330;old_locus_tag=YPIP275_3010 NZ_AAOS02000011.1 Protein Homology CDS 193539 194804 . + 0 ID=cds-WP_002210515.1-4;Parent=gene-YPIP275_RS12330;Dbxref=GenBank:WP_002210515.1;Name=WP_002210515.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226819.1;locus_tag=YPIP275_RS12330;product=3-oxo-tetronate kinase;protein_id=WP_002210515.1;transl_table=11 NZ_AAOS02000011.1 RefSeq gene 194797 195417 . + . ID=gene-YPIP275_RS12335;Name=otnC;gbkey=Gene;gene=otnC;gene_biotype=protein_coding;locus_tag=YPIP275_RS12335;old_locus_tag=YPIP275_3011 NZ_AAOS02000011.1 Protein Homology CDS 194797 195417 . + 0 ID=cds-WP_002210516.1-4;Parent=gene-YPIP275_RS12335;Dbxref=GenBank:WP_002210516.1;Name=WP_002210516.1;Ontology_term=GO:0005996,GO:0016829;gbkey=CDS;gene=otnC;go_function=lyase activity|0016829||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226818.1;locus_tag=YPIP275_RS12335;product=3-oxo-tetronate 4-phosphate decarboxylase;protein_id=WP_002210516.1;transl_table=11 NZ_AAOS02000011.1 RefSeq pseudogene 195422 196075 . + . ID=gene-YPIP275_RS12340;Name=YPIP275_RS12340;end_range=196075,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS12340;partial=true;pseudo=true NZ_AAOS02000011.1 Protein Homology CDS 195422 196075 . + 0 ID=cds-YPIP275_RS12340;Parent=gene-YPIP275_RS12340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=196075,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226817.1;locus_tag=YPIP275_RS12340;partial=true;product=TIM barrel protein;pseudo=true;transl_table=11 NZ_AAOS02000011.1 RefSeq pseudogene 196129 196832 . - . ID=gene-YPIP275_RS12345;Name=YPIP275_RS12345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS12345;old_locus_tag=YPIP275_3013;pseudo=true NZ_AAOS02000011.1 Protein Homology CDS 196129 196832 . - 0 ID=cds-YPIP275_RS12345;Parent=gene-YPIP275_RS12345;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=YPIP275_RS12345;product=IS6-like element IS26 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_AAOS02000010.1 1 198554 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000010.1 RefSeq region 1 198554 . + . ID=NZ_AAOS02000010.1:1..198554;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000010.1 RefSeq gene 35 250 . + . ID=gene-YPIP275_RS10205;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=YPIP275_RS10205;old_locus_tag=YPIP275_2439 NZ_AAOS02000010.1 Protein Homology CDS 35 250 . + 0 ID=cds-WP_001144069.1;Parent=gene-YPIP275_RS10205;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=YPIP275_RS10205;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 386 2134 . + . ID=gene-YPIP275_RS10210;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=YPIP275_RS10210;old_locus_tag=YPIP275_2440 NZ_AAOS02000010.1 Protein Homology CDS 386 2134 . + 0 ID=cds-WP_002210358.1;Parent=gene-YPIP275_RS10210;Dbxref=GenBank:WP_002210358.1;Name=WP_002210358.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817223.1;locus_tag=YPIP275_RS10210;product=DNA primase;protein_id=WP_002210358.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 2292 4130 . + . ID=gene-YPIP275_RS10215;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=YPIP275_RS10215;old_locus_tag=YPIP275_2441 NZ_AAOS02000010.1 Protein Homology CDS 2292 4130 . + 0 ID=cds-WP_002210359.1;Parent=gene-YPIP275_RS10215;Dbxref=GenBank:WP_002210359.1;Name=WP_002210359.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228906.1;locus_tag=YPIP275_RS10215;product=RNA polymerase sigma factor RpoD;protein_id=WP_002210359.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 4326 4402 . + . ID=gene-YPIP275_RS10220;Name=YPIP275_RS10220;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS10220;old_locus_tag=YPIP275_2442 NZ_AAOS02000010.1 tRNAscan-SE tRNA 4326 4402 . + . ID=rna-YPIP275_RS10220;Parent=gene-YPIP275_RS10220;anticodon=(pos:4360..4362);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS10220;product=tRNA-Ile NZ_AAOS02000010.1 tRNAscan-SE exon 4326 4402 . + . ID=exon-YPIP275_RS10220-1;Parent=rna-YPIP275_RS10220;anticodon=(pos:4360..4362);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS10220;product=tRNA-Ile NZ_AAOS02000010.1 RefSeq gene 4648 4986 . - . ID=gene-YPIP275_RS28605;Name=YPIP275_RS28605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28605;old_locus_tag=YPIP275_2443 NZ_AAOS02000010.1 Protein Homology CDS 4648 4986 . - 0 ID=cds-WP_002217368.1;Parent=gene-YPIP275_RS28605;Dbxref=GenBank:WP_002217368.1;Name=WP_002217368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217368.1;locus_tag=YPIP275_RS28605;product=hypothetical protein;protein_id=WP_002217368.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 4964 5254 . - . ID=gene-YPIP275_RS28610;Name=YPIP275_RS28610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28610;old_locus_tag=YPIP275_2444 NZ_AAOS02000010.1 Protein Homology CDS 4964 5254 . - 0 ID=cds-WP_002217366.1;Parent=gene-YPIP275_RS28610;Dbxref=GenBank:WP_002217366.1;Name=WP_002217366.1;Ontology_term=GO:0051276;gbkey=CDS;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217366.1;locus_tag=YPIP275_RS28610;product=terminase small subunit;protein_id=WP_002217366.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 5271 5726 . - . ID=gene-YPIP275_RS10235;Name=YPIP275_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10235;old_locus_tag=YPIP275_2445 NZ_AAOS02000010.1 Protein Homology CDS 5271 5726 . - 0 ID=cds-WP_002210360.1;Parent=gene-YPIP275_RS10235;Dbxref=GenBank:WP_002210360.1;Name=WP_002210360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210360.1;locus_tag=YPIP275_RS10235;product=YrhA family protein;protein_id=WP_002210360.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 5753 6223 . - . ID=gene-YPIP275_RS10240;Name=YPIP275_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10240;old_locus_tag=YPIP275_2446 NZ_AAOS02000010.1 Protein Homology CDS 5753 6223 . - 0 ID=cds-WP_002210361.1;Parent=gene-YPIP275_RS10240;Dbxref=GenBank:WP_002210361.1;Name=WP_002210361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210361.1;locus_tag=YPIP275_RS10240;product=YrhA family protein;protein_id=WP_002210361.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 6232 7614 . - . ID=gene-YPIP275_RS10245;Name=YPIP275_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10245;old_locus_tag=YPIP275_2447 NZ_AAOS02000010.1 Protein Homology CDS 6232 7614 . - 0 ID=cds-WP_002210362.1;Parent=gene-YPIP275_RS10245;Dbxref=GenBank:WP_002210362.1;Name=WP_002210362.1;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210362.1;locus_tag=YPIP275_RS10245;product=HNH endonuclease signature motif containing protein;protein_id=WP_002210362.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 7747 7977 . - . ID=gene-YPIP275_RS10250;Name=YPIP275_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10250 NZ_AAOS02000010.1 Protein Homology CDS 7747 7977 . - 0 ID=cds-WP_002214241.1;Parent=gene-YPIP275_RS10250;Dbxref=GenBank:WP_002214241.1;Name=WP_002214241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214241.1;locus_tag=YPIP275_RS10250;product=hypothetical protein;protein_id=WP_002214241.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 8533 8691 . + . ID=gene-YPIP275_RS10260;Name=YPIP275_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10260;old_locus_tag=YPIP275_2449 NZ_AAOS02000010.1 Protein Homology CDS 8533 8691 . + 0 ID=cds-WP_002210363.1;Parent=gene-YPIP275_RS10260;Dbxref=GenBank:WP_002210363.1;Name=WP_002210363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210363.1;locus_tag=YPIP275_RS10260;product=hypothetical protein;protein_id=WP_002210363.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 8688 9050 . - . ID=gene-YPIP275_RS10265;Name=YPIP275_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10265 NZ_AAOS02000010.1 Protein Homology CDS 8688 9050 . - 0 ID=cds-WP_100227660.1;Parent=gene-YPIP275_RS10265;Dbxref=GenBank:WP_100227660.1;Name=WP_100227660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414034.1;locus_tag=YPIP275_RS10265;product=Fic family protein;protein_id=WP_100227660.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 8996 9259 . - . ID=gene-YPIP275_RS10270;Name=YPIP275_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10270;old_locus_tag=YPIP275_2450 NZ_AAOS02000010.1 GeneMarkS-2+ CDS 8996 9259 . - 0 ID=cds-WP_002214235.1;Parent=gene-YPIP275_RS10270;Dbxref=GenBank:WP_002214235.1;Name=WP_002214235.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS10270;product=hypothetical protein;protein_id=WP_002214235.1;transl_table=11 NZ_AAOS02000010.1 RefSeq pseudogene 9435 9581 . - . ID=gene-YPIP275_RS29215;Name=YPIP275_RS29215;end_range=9581,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29215;partial=true;pseudo=true;start_range=.,9435 NZ_AAOS02000010.1 Protein Homology CDS 9435 9581 . - 0 ID=cds-YPIP275_RS29215;Parent=gene-YPIP275_RS29215;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=9581,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_042551150.1;locus_tag=YPIP275_RS29215;partial=true;product=IS21 family transposase;pseudo=true;start_range=.,9435;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 9650 10582 . - . ID=gene-YPIP275_RS10275;Name=YPIP275_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10275;old_locus_tag=YPIP275_2451 NZ_AAOS02000010.1 Protein Homology CDS 9650 10582 . - 0 ID=cds-WP_002210366.1;Parent=gene-YPIP275_RS10275;Dbxref=GenBank:WP_002210366.1;Name=WP_002210366.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210366.1;locus_tag=YPIP275_RS10275;product=LysR family transcriptional regulator;protein_id=WP_002210366.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 10744 11460 . + . ID=gene-YPIP275_RS10280;Name=YPIP275_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10280;old_locus_tag=YPIP275_2452 NZ_AAOS02000010.1 Protein Homology CDS 10744 11460 . + 0 ID=cds-WP_002210367.1;Parent=gene-YPIP275_RS10280;Dbxref=GenBank:WP_002210367.1;Name=WP_002210367.1;Ontology_term=GO:0016667;gbkey=CDS;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193105.1;locus_tag=YPIP275_RS10280;product=DsbA family protein;protein_id=WP_002210367.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 11577 12359 . - . ID=gene-YPIP275_RS10285;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS10285;old_locus_tag=YPIP275_2453 NZ_AAOS02000010.1 Protein Homology CDS 11577 12359 . - 0 ID=cds-WP_001317493.1-30;Parent=gene-YPIP275_RS10285;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS10285;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 12356 13378 . - . ID=gene-YPIP275_RS10290;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10290;old_locus_tag=YPIP275_2454 NZ_AAOS02000010.1 Protein Homology CDS 12356 13378 . - 0 ID=cds-WP_000255944.1-25;Parent=gene-YPIP275_RS10290;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS10290;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 13679 13981 . + . ID=gene-YPIP275_RS10295;Name=YPIP275_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10295;old_locus_tag=YPIP275_2455 NZ_AAOS02000010.1 Protein Homology CDS 13679 13981 . + 0 ID=cds-WP_002210368.1;Parent=gene-YPIP275_RS10295;Dbxref=GenBank:WP_002210368.1;Name=WP_002210368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210368.1;locus_tag=YPIP275_RS10295;product=monooxygenase;protein_id=WP_002210368.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 14196 14600 . - . ID=gene-YPIP275_RS10300;Name=YPIP275_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10300;old_locus_tag=YPIP275_2456 NZ_AAOS02000010.1 Protein Homology CDS 14196 14600 . - 0 ID=cds-WP_002210369.1;Parent=gene-YPIP275_RS10300;Dbxref=GenBank:WP_002210369.1;Name=WP_002210369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210369.1;locus_tag=YPIP275_RS10300;product=RidA family protein;protein_id=WP_002210369.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 14885 15265 . - . ID=gene-YPIP275_RS10305;Name=YPIP275_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10305;old_locus_tag=YPIP275_2457 NZ_AAOS02000010.1 Protein Homology CDS 14885 15265 . - 0 ID=cds-WP_002210370.1;Parent=gene-YPIP275_RS10305;Dbxref=GenBank:WP_002210370.1;Name=WP_002210370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210370.1;locus_tag=YPIP275_RS10305;product=RidA family protein;protein_id=WP_002210370.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 15276 15323 . - . ID=gene-YPIP275_RS29360;Name=YPIP275_RS29360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29360 NZ_AAOS02000010.1 Protein Homology CDS 15276 15323 . - 0 ID=cds-WP_223871901.1;Parent=gene-YPIP275_RS29360;Dbxref=GenBank:WP_223871901.1;Name=WP_223871901.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024705.7;locus_tag=YPIP275_RS29360;product=hypothetical protein;protein_id=WP_223871901.1;transl_table=11 NZ_AAOS02000010.1 RefSeq pseudogene 15587 15907 . - . ID=gene-YPIP275_RS29365;Name=YPIP275_RS29365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29365;partial=true;pseudo=true;start_range=.,15587 NZ_AAOS02000010.1 Protein Homology CDS 15587 15907 . - 0 ID=cds-YPIP275_RS29365;Parent=gene-YPIP275_RS29365;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF019947.8;locus_tag=YPIP275_RS29365;partial=true;product=PAS domain-containing protein;pseudo=true;start_range=.,15587;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 16041 16478 . - . ID=gene-YPIP275_RS10315;Name=YPIP275_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10315;old_locus_tag=YPIP275_2459 NZ_AAOS02000010.1 Protein Homology CDS 16041 16478 . - 0 ID=cds-WP_002210371.1;Parent=gene-YPIP275_RS10315;Dbxref=GenBank:WP_002210371.1;Name=WP_002210371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210371.1;locus_tag=YPIP275_RS10315;product=SRPBCC family protein;protein_id=WP_002210371.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 16491 17942 . - . ID=gene-YPIP275_RS10320;Name=YPIP275_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10320;old_locus_tag=YPIP275_2460 NZ_AAOS02000010.1 Protein Homology CDS 16491 17942 . - 0 ID=cds-WP_002214229.1;Parent=gene-YPIP275_RS10320;Dbxref=GenBank:WP_002214229.1;Name=WP_002214229.1;Ontology_term=GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214229.1;locus_tag=YPIP275_RS10320;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_002214229.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 17935 19167 . - . ID=gene-YPIP275_RS10325;Name=YPIP275_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10325;old_locus_tag=YPIP275_2461 NZ_AAOS02000010.1 Protein Homology CDS 17935 19167 . - 0 ID=cds-WP_002210373.1;Parent=gene-YPIP275_RS10325;Dbxref=GenBank:WP_002210373.1;Name=WP_002210373.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414036.1;locus_tag=YPIP275_RS10325;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_002210373.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 19933 20133 . + . ID=gene-YPIP275_RS10335;Name=YPIP275_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10335;old_locus_tag=YPIP275_2462 NZ_AAOS02000010.1 Protein Homology CDS 19933 20133 . + 0 ID=cds-WP_002210374.1;Parent=gene-YPIP275_RS10335;Dbxref=GenBank:WP_002210374.1;Name=WP_002210374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210374.1;locus_tag=YPIP275_RS10335;product=hypothetical protein;protein_id=WP_002210374.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 20130 20465 . + . ID=gene-YPIP275_RS10340;Name=YPIP275_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10340 NZ_AAOS02000010.1 Protein Homology CDS 20130 20465 . + 0 ID=cds-WP_002214224.1;Parent=gene-YPIP275_RS10340;Dbxref=GenBank:WP_002214224.1;Name=WP_002214224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214224.1;locus_tag=YPIP275_RS10340;product=YtcA family lipoprotein;protein_id=WP_002214224.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 20475 21524 . + . ID=gene-YPIP275_RS10345;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=YPIP275_RS10345;old_locus_tag=YPIP275_2464 NZ_AAOS02000010.1 Protein Homology CDS 20475 21524 . + 0 ID=cds-WP_002210376.1;Parent=gene-YPIP275_RS10345;Dbxref=GenBank:WP_002210376.1;Name=WP_002210376.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210376.1;locus_tag=YPIP275_RS10345;product=multidrug transporter subunit MdtN;protein_id=WP_002210376.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 21508 23409 . + . ID=gene-YPIP275_RS10350;Name=YPIP275_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10350;old_locus_tag=YPIP275_2465 NZ_AAOS02000010.1 Protein Homology CDS 21508 23409 . + 0 ID=cds-WP_002210377.1;Parent=gene-YPIP275_RS10350;Dbxref=GenBank:WP_002210377.1;Name=WP_002210377.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193109.1;locus_tag=YPIP275_RS10350;product=FUSC family protein;protein_id=WP_002210377.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 23414 24940 . + . ID=gene-YPIP275_RS10355;Name=YPIP275_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10355;old_locus_tag=YPIP275_2466 NZ_AAOS02000010.1 Protein Homology CDS 23414 24940 . + 0 ID=cds-WP_002214220.1;Parent=gene-YPIP275_RS10355;Dbxref=GenBank:WP_002214220.1;Name=WP_002214220.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702825.1;locus_tag=YPIP275_RS10355;product=TolC family protein;protein_id=WP_002214220.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 25004 27187 . - . ID=gene-YPIP275_RS10360;Name=YPIP275_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10360;old_locus_tag=YPIP275_2467 NZ_AAOS02000010.1 Protein Homology CDS 25004 27187 . - 0 ID=cds-WP_002210379.1;Parent=gene-YPIP275_RS10360;Dbxref=GenBank:WP_002210379.1;Name=WP_002210379.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210379.1;locus_tag=YPIP275_RS10360;product=glycoside hydrolase family 3 N-terminal domain-containing protein;protein_id=WP_002210379.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 27238 27753 . - . ID=gene-YPIP275_RS10365;Name=YPIP275_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10365;old_locus_tag=YPIP275_2468 NZ_AAOS02000010.1 Protein Homology CDS 27238 27753 . - 0 ID=cds-WP_002210380.1;Parent=gene-YPIP275_RS10365;Dbxref=GenBank:WP_002210380.1;Name=WP_002210380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104453.1;locus_tag=YPIP275_RS10365;product=hypothetical protein;protein_id=WP_002210380.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 27750 28568 . - . ID=gene-YPIP275_RS10370;Name=YPIP275_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10370;old_locus_tag=YPIP275_2469 NZ_AAOS02000010.1 Protein Homology CDS 27750 28568 . - 0 ID=cds-WP_002210381.1;Parent=gene-YPIP275_RS10370;Dbxref=GenBank:WP_002210381.1;Name=WP_002210381.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193112.1;locus_tag=YPIP275_RS10370;product=carbohydrate ABC transporter permease;protein_id=WP_002210381.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 28568 29449 . - . ID=gene-YPIP275_RS10375;Name=YPIP275_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10375;old_locus_tag=YPIP275_2470 NZ_AAOS02000010.1 Protein Homology CDS 28568 29449 . - 0 ID=cds-WP_002210382.1;Parent=gene-YPIP275_RS10375;Dbxref=GenBank:WP_002210382.1;Name=WP_002210382.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193113.1;locus_tag=YPIP275_RS10375;product=carbohydrate ABC transporter permease;protein_id=WP_002210382.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 29503 30747 . - . ID=gene-YPIP275_RS10380;Name=YPIP275_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10380;old_locus_tag=YPIP275_2471 NZ_AAOS02000010.1 Protein Homology CDS 29503 30747 . - 0 ID=cds-WP_002214214.1;Parent=gene-YPIP275_RS10380;Dbxref=GenBank:WP_002214214.1;Name=WP_002214214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016581109.1;locus_tag=YPIP275_RS10380;product=extracellular solute-binding protein;protein_id=WP_002214214.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 30824 31810 . - . ID=gene-YPIP275_RS10385;Name=YPIP275_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10385;old_locus_tag=YPIP275_2472 NZ_AAOS02000010.1 Protein Homology CDS 30824 31810 . - 0 ID=cds-WP_002210384.1;Parent=gene-YPIP275_RS10385;Dbxref=GenBank:WP_002210384.1;Name=WP_002210384.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229191.1;locus_tag=YPIP275_RS10385;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002210384.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 31919 35272 . - . ID=gene-YPIP275_RS10390;Name=YPIP275_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10390;old_locus_tag=YPIP275_2473 NZ_AAOS02000010.1 Protein Homology CDS 31919 35272 . - 0 ID=cds-WP_002214212.1;Parent=gene-YPIP275_RS10390;Dbxref=GenBank:WP_002214212.1;Name=WP_002214212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303513.1;locus_tag=YPIP275_RS10390;product=hypothetical protein;protein_id=WP_002214212.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 35355 36470 . - . ID=gene-YPIP275_RS10395;Name=YPIP275_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10395;old_locus_tag=YPIP275_2474 NZ_AAOS02000010.1 Protein Homology CDS 35355 36470 . - 0 ID=cds-WP_002353714.1;Parent=gene-YPIP275_RS10395;Dbxref=GenBank:WP_002353714.1;Name=WP_002353714.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353714.1;locus_tag=YPIP275_RS10395;product=ABC transporter ATP-binding protein;protein_id=WP_002353714.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 36796 38175 . + . ID=gene-YPIP275_RS10400;Name=YPIP275_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10400;old_locus_tag=YPIP275_2475 NZ_AAOS02000010.1 Protein Homology CDS 36796 38175 . + 0 ID=cds-WP_002210387.1;Parent=gene-YPIP275_RS10400;Dbxref=GenBank:WP_002210387.1;Name=WP_002210387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210387.1;locus_tag=YPIP275_RS10400;product=glucoamylase family protein;protein_id=WP_002210387.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 38277 39272 . + . ID=gene-YPIP275_RS10405;Name=YPIP275_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10405;old_locus_tag=YPIP275_2476 NZ_AAOS02000010.1 Protein Homology CDS 38277 39272 . + 0 ID=cds-WP_002210388.1;Parent=gene-YPIP275_RS10405;Dbxref=GenBank:WP_002210388.1;Name=WP_002210388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674197.1;locus_tag=YPIP275_RS10405;product=transporter;protein_id=WP_002210388.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 39332 41617 . + . ID=gene-YPIP275_RS10410;Name=yapF;gbkey=Gene;gene=yapF;gene_biotype=protein_coding;locus_tag=YPIP275_RS10410;old_locus_tag=YPIP275_2477 NZ_AAOS02000010.1 Protein Homology CDS 39332 41617 . + 0 ID=cds-WP_002210389.1;Parent=gene-YPIP275_RS10410;Dbxref=GenBank:WP_002210389.1;Name=WP_002210389.1;gbkey=CDS;gene=yapF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210389.1;locus_tag=YPIP275_RS10410;product=autotransporter YapF;protein_id=WP_002210389.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 41885 42049 . - . ID=gene-YPIP275_RS10415;Name=YPIP275_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10415;old_locus_tag=YPIP275_2478 NZ_AAOS02000010.1 Protein Homology CDS 41885 42049 . - 0 ID=cds-WP_002228290.1;Parent=gene-YPIP275_RS10415;Dbxref=GenBank:WP_002228290.1;Name=WP_002228290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228290.1;locus_tag=YPIP275_RS10415;product=hypothetical protein;protein_id=WP_002228290.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 42113 42817 . - . ID=gene-YPIP275_RS10420;Name=YPIP275_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10420;old_locus_tag=YPIP275_2479 NZ_AAOS02000010.1 Protein Homology CDS 42113 42817 . - 0 ID=cds-WP_002430079.1;Parent=gene-YPIP275_RS10420;Dbxref=GenBank:WP_002430079.1;Name=WP_002430079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214952.1;locus_tag=YPIP275_RS10420;product=S-layer family protein;protein_id=WP_002430079.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 42901 43317 . - . ID=gene-YPIP275_RS10425;Name=YPIP275_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10425 NZ_AAOS02000010.1 Protein Homology CDS 42901 43317 . - 0 ID=cds-WP_002214951.1;Parent=gene-YPIP275_RS10425;Dbxref=GenBank:WP_002214951.1;Name=WP_002214951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214951.1;locus_tag=YPIP275_RS10425;product=immunity 63 family protein;protein_id=WP_002214951.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 43319 43477 . - . ID=gene-YPIP275_RS27260;Name=YPIP275_RS27260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27260;old_locus_tag=YPIP275_2481 NZ_AAOS02000010.1 Protein Homology CDS 43319 43477 . - 0 ID=cds-WP_002229072.1;Parent=gene-YPIP275_RS27260;Dbxref=GenBank:WP_002229072.1;Name=WP_002229072.1;Note=This protein contains a domain related to Tuberculosis Necrotizing Toxin%2C which is the C-terminal effector domain of outer membrane channel protein CpnT%2C and which has a lethal NAD+-glycohydrolase activity.;Ontology_term=GO:0050135;gbkey=CDS;go_function=NADP+ nucleosidase activity|0050135||IEA;inference=COORDINATES: protein motif:HMM:NF025387.7;locus_tag=YPIP275_RS27260;product=glycohydrolase toxin TNT-related protein;protein_id=WP_002229072.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 43413 43640 . - . ID=gene-YPIP275_RS10430;Name=YPIP275_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10430;old_locus_tag=YPIP275_2482 NZ_AAOS02000010.1 Protein Homology CDS 43413 43640 . - 0 ID=cds-WP_002214949.1;Parent=gene-YPIP275_RS10430;Dbxref=GenBank:WP_002214949.1;Name=WP_002214949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214949.1;locus_tag=YPIP275_RS10430;product=V-type ATP synthase subunit E family protein;protein_id=WP_002214949.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 43695 43844 . - . ID=gene-YPIP275_RS10435;Name=YPIP275_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10435;old_locus_tag=YPIP275_2483 NZ_AAOS02000010.1 Protein Homology CDS 43695 43844 . - 0 ID=cds-WP_002214947.1;Parent=gene-YPIP275_RS10435;Dbxref=GenBank:WP_002214947.1;Name=WP_002214947.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.7;locus_tag=YPIP275_RS10435;product=hemagglutinin repeat-containing protein;protein_id=WP_002214947.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 43906 44139 . - . ID=gene-YPIP275_RS10440;Name=cdiI;gbkey=Gene;gene=cdiI;gene_biotype=protein_coding;locus_tag=YPIP275_RS10440 NZ_AAOS02000010.1 Protein Homology CDS 43906 44139 . - 0 ID=cds-WP_002214946.1;Parent=gene-YPIP275_RS10440;Dbxref=GenBank:WP_002214946.1;Name=WP_002214946.1;gbkey=CDS;gene=cdiI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214946.1;locus_tag=YPIP275_RS10440;product=toxin-immunity protein system imunity protein CdiI;protein_id=WP_002214946.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 44136 44369 . - . ID=gene-YPIP275_RS28630;Name=YPIP275_RS28630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28630;old_locus_tag=YPIP275_2485 NZ_AAOS02000010.1 Protein Homology CDS 44136 44369 . - 0 ID=cds-WP_002353710.1;Parent=gene-YPIP275_RS28630;Dbxref=GenBank:WP_002353710.1;Name=WP_002353710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353710.1;locus_tag=YPIP275_RS28630;product=hypothetical protein;protein_id=WP_002353710.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 44338 52377 . - . ID=gene-YPIP275_RS10445;Name=YPIP275_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10445;old_locus_tag=YPIP275_2486 NZ_AAOS02000010.1 Protein Homology CDS 44338 52377 . - 0 ID=cds-WP_002210393.1;Parent=gene-YPIP275_RS10445;Dbxref=GenBank:WP_002210393.1;Name=WP_002210393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210393.1;locus_tag=YPIP275_RS10445;product=two-partner secretion domain-containing protein;protein_id=WP_002210393.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 52422 54110 . - . ID=gene-YPIP275_RS10450;Name=YPIP275_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10450;old_locus_tag=YPIP275_2487 NZ_AAOS02000010.1 Protein Homology CDS 52422 54110 . - 0 ID=cds-WP_002210394.1;Parent=gene-YPIP275_RS10450;Dbxref=GenBank:WP_002210394.1;Name=WP_002210394.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193126.1;locus_tag=YPIP275_RS10450;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_002210394.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 54825 55463 . + . ID=gene-YPIP275_RS10455;Name=YPIP275_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10455;old_locus_tag=YPIP275_2488 NZ_AAOS02000010.1 Protein Homology CDS 54825 55463 . + 0 ID=cds-WP_002210395.1;Parent=gene-YPIP275_RS10455;Dbxref=GenBank:WP_002210395.1;Name=WP_002210395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015731191.1;locus_tag=YPIP275_RS10455;product=vWA domain-containing protein;protein_id=WP_002210395.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 55496 56137 . + . ID=gene-YPIP275_RS10460;Name=YPIP275_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10460;old_locus_tag=YPIP275_2489 NZ_AAOS02000010.1 Protein Homology CDS 55496 56137 . + 0 ID=cds-WP_002210396.1;Parent=gene-YPIP275_RS10460;Dbxref=GenBank:WP_002210396.1;Name=WP_002210396.1;Ontology_term=GO:0050896;gbkey=CDS;go_process=response to stimulus|0050896||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210396.1;locus_tag=YPIP275_RS10460;product=TerD family protein;protein_id=WP_002210396.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 56139 56777 . + . ID=gene-YPIP275_RS10465;Name=YPIP275_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10465;old_locus_tag=YPIP275_2490 NZ_AAOS02000010.1 Protein Homology CDS 56139 56777 . + 0 ID=cds-WP_002228094.1;Parent=gene-YPIP275_RS10465;Dbxref=GenBank:WP_002228094.1;Name=WP_002228094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013087240.1;locus_tag=YPIP275_RS10465;product=vWA domain-containing protein;protein_id=WP_002228094.1;transl_table=11 NZ_AAOS02000010.1 RefSeq pseudogene 56879 57918 . + . ID=gene-YPIP275_RS10470;Name=YPIP275_RS10470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS10470;old_locus_tag=YPIP275_2491;pseudo=true NZ_AAOS02000010.1 Protein Homology CDS 56879 57918 . + 0 ID=cds-YPIP275_RS10470;Parent=gene-YPIP275_RS10470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001253653.1;locus_tag=YPIP275_RS10470;product=TerY-C metal binding domain-containing protein;pseudo=true;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 57918 59651 . + . ID=gene-YPIP275_RS10475;Name=YPIP275_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10475;old_locus_tag=YPIP275_2492 NZ_AAOS02000010.1 Protein Homology CDS 57918 59651 . + 0 ID=cds-WP_002210398.1;Parent=gene-YPIP275_RS10475;Dbxref=GenBank:WP_002210398.1;Name=WP_002210398.1;Ontology_term=GO:0006470,GO:0004722,GO:0046872;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA,metal ion binding|0046872||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906153.1;locus_tag=YPIP275_RS10475;product=PP2C family serine/threonine-protein phosphatase;protein_id=WP_002210398.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 59683 61182 . + . ID=gene-YPIP275_RS10480;Name=YPIP275_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10480;old_locus_tag=YPIP275_2493 NZ_AAOS02000010.1 Protein Homology CDS 59683 61182 . + 0 ID=cds-WP_002210399.1;Parent=gene-YPIP275_RS10480;Dbxref=GenBank:WP_002210399.1;Name=WP_002210399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303502.1;locus_tag=YPIP275_RS10480;product=helix-hairpin-helix domain-containing protein;protein_id=WP_002210399.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 61573 62142 . + . ID=gene-YPIP275_RS10490;Name=YPIP275_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10490;old_locus_tag=YPIP275_2494 NZ_AAOS02000010.1 Protein Homology CDS 61573 62142 . + 0 ID=cds-WP_002210400.1;Parent=gene-YPIP275_RS10490;Dbxref=GenBank:WP_002210400.1;Name=WP_002210400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210400.1;locus_tag=YPIP275_RS10490;product=HdeD family acid-resistance protein;protein_id=WP_002210400.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 62355 64376 . + . ID=gene-YPIP275_RS10495;Name=YPIP275_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10495;old_locus_tag=YPIP275_2495 NZ_AAOS02000010.1 Protein Homology CDS 62355 64376 . + 0 ID=cds-WP_002210401.1;Parent=gene-YPIP275_RS10495;Dbxref=GenBank:WP_002210401.1;Name=WP_002210401.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002429085.1;locus_tag=YPIP275_RS10495;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_002210401.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 64492 65679 . - . ID=gene-YPIP275_RS10500;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=YPIP275_RS10500;old_locus_tag=YPIP275_2496 NZ_AAOS02000010.1 Protein Homology CDS 64492 65679 . - 0 ID=cds-WP_002210402.1;Parent=gene-YPIP275_RS10500;Dbxref=GenBank:WP_002210402.1;Name=WP_002210402.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277284.1;locus_tag=YPIP275_RS10500;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_002210402.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 66148 69132 . + . ID=gene-YPIP275_RS10505;Name=yapG;gbkey=Gene;gene=yapG;gene_biotype=protein_coding;locus_tag=YPIP275_RS10505;old_locus_tag=YPIP275_2497 NZ_AAOS02000010.1 Protein Homology CDS 66148 69132 . + 0 ID=cds-WP_002210403.1;Parent=gene-YPIP275_RS10505;Dbxref=GenBank:WP_002210403.1;Name=WP_002210403.1;gbkey=CDS;gene=yapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210403.1;locus_tag=YPIP275_RS10505;product=autotransporter YapG;protein_id=WP_002210403.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 69371 69880 . + . ID=gene-YPIP275_RS10510;Name=YPIP275_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10510;old_locus_tag=YPIP275_2498 NZ_AAOS02000010.1 Protein Homology CDS 69371 69880 . + 0 ID=cds-WP_002210404.1;Parent=gene-YPIP275_RS10510;Dbxref=GenBank:WP_002210404.1;Name=WP_002210404.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210404.1;locus_tag=YPIP275_RS10510;product=M48 metallopeptidase family protein;protein_id=WP_002210404.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 70083 71078 . + . ID=gene-YPIP275_RS10515;Name=YPIP275_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10515;old_locus_tag=YPIP275_2499 NZ_AAOS02000010.1 Protein Homology CDS 70083 71078 . + 0 ID=cds-WP_002210405.1;Parent=gene-YPIP275_RS10515;Dbxref=GenBank:WP_002210405.1;Name=WP_002210405.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210405.1;locus_tag=YPIP275_RS10515;product=Gfo/Idh/MocA family protein;protein_id=WP_002210405.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 71613 72869 . + . ID=gene-YPIP275_RS10520;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=YPIP275_RS10520;old_locus_tag=YPIP275_2500 NZ_AAOS02000010.1 Protein Homology CDS 71613 72869 . + 0 ID=cds-WP_002216063.1;Parent=gene-YPIP275_RS10520;Dbxref=GenBank:WP_002216063.1;Name=WP_002216063.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104429.1;locus_tag=YPIP275_RS10520;product=serine/threonine transporter SstT;protein_id=WP_002216063.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 73070 73528 . + . ID=gene-YPIP275_RS10525;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10525;old_locus_tag=YPIP275_2501 NZ_AAOS02000010.1 Protein Homology CDS 73070 73528 . + 0 ID=cds-WP_002213775.1-22;Parent=gene-YPIP275_RS10525;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS10525;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 73646 74176 . - . ID=gene-YPIP275_RS10530;Name=YPIP275_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10530;old_locus_tag=YPIP275_2502 NZ_AAOS02000010.1 Protein Homology CDS 73646 74176 . - 0 ID=cds-WP_002210407.1;Parent=gene-YPIP275_RS10530;Dbxref=GenBank:WP_002210407.1;Name=WP_002210407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104428.1;locus_tag=YPIP275_RS10530;product=YgjV family protein;protein_id=WP_002210407.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 74329 75819 . - . ID=gene-YPIP275_RS10535;Name=YPIP275_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10535;old_locus_tag=YPIP275_2503 NZ_AAOS02000010.1 Protein Homology CDS 74329 75819 . - 0 ID=cds-WP_002210408.1;Parent=gene-YPIP275_RS10535;Dbxref=GenBank:WP_002210408.1;Name=WP_002210408.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013316279.1;locus_tag=YPIP275_RS10535;product=UxaA family hydrolase;protein_id=WP_002210408.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 75830 77281 . - . ID=gene-YPIP275_RS10540;Name=YPIP275_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10540;old_locus_tag=YPIP275_2504 NZ_AAOS02000010.1 Protein Homology CDS 75830 77281 . - 0 ID=cds-WP_002210409.1;Parent=gene-YPIP275_RS10540;Dbxref=GenBank:WP_002210409.1;Name=WP_002210409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193132.1;locus_tag=YPIP275_RS10540;product=tagaturonate reductase;protein_id=WP_002210409.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 77480 78889 . - . ID=gene-YPIP275_RS10545;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=YPIP275_RS10545;old_locus_tag=YPIP275_2505 NZ_AAOS02000010.1 Protein Homology CDS 77480 78889 . - 0 ID=cds-WP_002210410.1;Parent=gene-YPIP275_RS10545;Dbxref=GenBank:WP_002210410.1;Name=WP_002210410.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210410.1;locus_tag=YPIP275_RS10545;product=glucuronate isomerase;protein_id=WP_002210410.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 79637 80938 . + . ID=gene-YPIP275_RS10555;Name=YPIP275_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10555;old_locus_tag=YPIP275_2506 NZ_AAOS02000010.1 Protein Homology CDS 79637 80938 . + 0 ID=cds-WP_002353699.1;Parent=gene-YPIP275_RS10555;Dbxref=GenBank:WP_002353699.1;Name=WP_002353699.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353699.1;locus_tag=YPIP275_RS10555;product=MFS transporter;protein_id=WP_002353699.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 81201 81995 . + . ID=gene-YPIP275_RS10560;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=YPIP275_RS10560;old_locus_tag=YPIP275_2507 NZ_AAOS02000010.1 Protein Homology CDS 81201 81995 . + 0 ID=cds-WP_002210412.1;Parent=gene-YPIP275_RS10560;Dbxref=GenBank:WP_002210412.1;Name=WP_002210412.1;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210412.1;locus_tag=YPIP275_RS10560;product=transcriptional regulator ExuR;protein_id=WP_002210412.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 82244 82777 . + . ID=gene-YPIP275_RS10565;Name=YPIP275_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10565;old_locus_tag=YPIP275_2508 NZ_AAOS02000010.1 Protein Homology CDS 82244 82777 . + 0 ID=cds-WP_002218957.1;Parent=gene-YPIP275_RS10565;Dbxref=GenBank:WP_002218957.1;Name=WP_002218957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303498.1;locus_tag=YPIP275_RS10565;product=hypothetical protein;protein_id=WP_002218957.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 83055 83753 . + . ID=gene-YPIP275_RS10570;Name=YPIP275_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10570;old_locus_tag=YPIP275_2509 NZ_AAOS02000010.1 Protein Homology CDS 83055 83753 . + 0 ID=cds-WP_002210414.1;Parent=gene-YPIP275_RS10570;Dbxref=GenBank:WP_002210414.1;Name=WP_002210414.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210414.1;locus_tag=YPIP275_RS10570;product=DedA family protein;protein_id=WP_002210414.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 83750 84139 . + . ID=gene-YPIP275_RS10575;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10575;old_locus_tag=YPIP275_2510 NZ_AAOS02000010.1 Protein Homology CDS 83750 84139 . + 0 ID=cds-WP_002210415.1;Parent=gene-YPIP275_RS10575;Dbxref=GenBank:WP_002210415.1;Name=WP_002210415.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210415.1;locus_tag=YPIP275_RS10575;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_002210415.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 84365 84745 . + . ID=gene-YPIP275_RS10580;Name=YPIP275_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10580;old_locus_tag=YPIP275_2511 NZ_AAOS02000010.1 Protein Homology CDS 84365 84745 . + 0 ID=cds-WP_002210416.1;Parent=gene-YPIP275_RS10580;Dbxref=GenBank:WP_002210416.1;Name=WP_002210416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210416.1;locus_tag=YPIP275_RS10580;product=DUF1090 domain-containing protein;protein_id=WP_002210416.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 84900 85205 . + . ID=gene-YPIP275_RS10590;Name=YPIP275_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10590;old_locus_tag=YPIP275_2513 NZ_AAOS02000010.1 Protein Homology CDS 84900 85205 . + 0 ID=cds-WP_002210418.1;Parent=gene-YPIP275_RS10590;Dbxref=GenBank:WP_002210418.1;Name=WP_002210418.1;Ontology_term=GO:0043022,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709853.1;locus_tag=YPIP275_RS10590;product=ElaB/YgaM/YqjD family protein;protein_id=WP_002210418.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 85208 85603 . + . ID=gene-YPIP275_RS10595;Name=YPIP275_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10595;old_locus_tag=YPIP275_2514 NZ_AAOS02000010.1 Protein Homology CDS 85208 85603 . + 0 ID=cds-WP_002210419.1;Parent=gene-YPIP275_RS10595;Dbxref=GenBank:WP_002210419.1;Name=WP_002210419.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004705306.1;locus_tag=YPIP275_RS10595;product=phage holin family protein;protein_id=WP_002210419.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 85600 85884 . + . ID=gene-YPIP275_RS10600;Name=YPIP275_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10600;old_locus_tag=YPIP275_2515 NZ_AAOS02000010.1 Protein Homology CDS 85600 85884 . + 0 ID=cds-WP_002210420.1;Parent=gene-YPIP275_RS10600;Dbxref=GenBank:WP_002210420.1;Name=WP_002210420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193134.1;locus_tag=YPIP275_RS10600;product=YqjK-like family protein;protein_id=WP_002210420.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 86188 86583 . + . ID=gene-YPIP275_RS10605;Name=YPIP275_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10605;old_locus_tag=YPIP275_2516 NZ_AAOS02000010.1 Protein Homology CDS 86188 86583 . + 0 ID=cds-WP_002210421.1;Parent=gene-YPIP275_RS10605;Dbxref=GenBank:WP_002210421.1;Name=WP_002210421.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=YPIP275_RS10605;product=DoxX family protein;protein_id=WP_002210421.1;transl_table=11 NZ_AAOS02000010.1 RefSeq pseudogene 86669 86773 . + . ID=gene-YPIP275_RS28635;Name=YPIP275_RS28635;end_range=86773,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28635;partial=true;pseudo=true NZ_AAOS02000010.1 Protein Homology CDS 86669 86773 . + 0 ID=cds-YPIP275_RS28635;Parent=gene-YPIP275_RS28635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=86773,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650472.1;locus_tag=YPIP275_RS28635;partial=true;product=glutathione S-transferase family protein;pseudo=true;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 86862 87884 . + . ID=gene-YPIP275_RS10615;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10615;old_locus_tag=YPIP275_2518 NZ_AAOS02000010.1 Protein Homology CDS 86862 87884 . + 0 ID=cds-WP_000255944.1-26;Parent=gene-YPIP275_RS10615;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS10615;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 87881 88663 . + . ID=gene-YPIP275_RS10620;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS10620;old_locus_tag=YPIP275_2519 NZ_AAOS02000010.1 Protein Homology CDS 87881 88663 . + 0 ID=cds-WP_001317493.1-31;Parent=gene-YPIP275_RS10620;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS10620;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 88925 89311 . - . ID=gene-YPIP275_RS10625;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=YPIP275_RS10625;old_locus_tag=YPIP275_2521 NZ_AAOS02000010.1 Protein Homology CDS 88925 89311 . - 0 ID=cds-WP_002210424.1;Parent=gene-YPIP275_RS10625;Dbxref=GenBank:WP_002210424.1;Name=WP_002210424.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210424.1;locus_tag=YPIP275_RS10625;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_002210424.1;transl_table=11 NZ_AAOS02000010.1 RefSeq pseudogene 89489 89581 . + . ID=gene-YPIP275_RS27275;Name=YPIP275_RS27275;end_range=89581,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS27275;partial=true;pseudo=true NZ_AAOS02000010.1 Protein Homology CDS 89489 89581 . + 0 ID=cds-YPIP275_RS27275;Parent=gene-YPIP275_RS27275;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=89581,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378124.1;locus_tag=YPIP275_RS27275;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 89606 92320 . - . ID=gene-YPIP275_RS10630;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10630;old_locus_tag=YPIP275_2523 NZ_AAOS02000010.1 Protein Homology CDS 89606 92320 . - 0 ID=cds-WP_002210426.1;Parent=gene-YPIP275_RS10630;Dbxref=GenBank:WP_002210426.1;Name=WP_002210426.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308129.1;locus_tag=YPIP275_RS10630;product=preprotein translocase subunit SecA;protein_id=WP_002210426.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 92398 92931 . - . ID=gene-YPIP275_RS10635;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=YPIP275_RS10635;old_locus_tag=YPIP275_2524 NZ_AAOS02000010.1 Protein Homology CDS 92398 92931 . - 0 ID=cds-WP_002210427.1;Parent=gene-YPIP275_RS10635;Dbxref=GenBank:WP_002210427.1;Name=WP_002210427.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210427.1;locus_tag=YPIP275_RS10635;product=secA translation cis-regulator SecM;protein_id=WP_002210427.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 92960 93484 . + . ID=gene-YPIP275_RS10640;Name=YPIP275_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10640;old_locus_tag=YPIP275_2525 NZ_AAOS02000010.1 Protein Homology CDS 92960 93484 . + 0 ID=cds-WP_002210428.1;Parent=gene-YPIP275_RS10640;Dbxref=GenBank:WP_002210428.1;Name=WP_002210428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210428.1;locus_tag=YPIP275_RS10640;product=DUF721 domain-containing protein;protein_id=WP_002210428.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 93651 94571 . - . ID=gene-YPIP275_RS10645;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=YPIP275_RS10645;old_locus_tag=YPIP275_2526 NZ_AAOS02000010.1 Protein Homology CDS 93651 94571 . - 0 ID=cds-WP_002228285.1;Parent=gene-YPIP275_RS10645;Dbxref=GenBank:WP_002228285.1;Name=WP_002228285.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005181431.1;locus_tag=YPIP275_RS10645;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_002228285.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 94671 95822 . - . ID=gene-YPIP275_RS10650;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=YPIP275_RS10650;old_locus_tag=YPIP275_2527 NZ_AAOS02000010.1 Protein Homology CDS 94671 95822 . - 0 ID=cds-WP_002210430.1;Parent=gene-YPIP275_RS10650;Dbxref=GenBank:WP_002210430.1;Name=WP_002210430.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=YPIP275_RS10650;product=cell division protein FtsZ;protein_id=WP_002210430.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 95895 97151 . - . ID=gene-YPIP275_RS10655;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10655;old_locus_tag=YPIP275_2528 NZ_AAOS02000010.1 Protein Homology CDS 95895 97151 . - 0 ID=cds-WP_002210431.1;Parent=gene-YPIP275_RS10655;Dbxref=GenBank:WP_002210431.1;Name=WP_002210431.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=YPIP275_RS10655;product=cell division protein FtsA;protein_id=WP_002210431.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 97178 98005 . - . ID=gene-YPIP275_RS10660;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS10660;old_locus_tag=YPIP275_2529 NZ_AAOS02000010.1 Protein Homology CDS 97178 98005 . - 0 ID=cds-WP_002228100.1;Parent=gene-YPIP275_RS10660;Dbxref=GenBank:WP_002228100.1;Name=WP_002228100.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002420359.1;locus_tag=YPIP275_RS10660;product=cell division protein FtsQ;protein_id=WP_002228100.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 98007 98927 . - . ID=gene-YPIP275_RS10665;Name=YPIP275_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10665;old_locus_tag=YPIP275_2530 NZ_AAOS02000010.1 Protein Homology CDS 98007 98927 . - 0 ID=cds-WP_002210432.1;Parent=gene-YPIP275_RS10665;Dbxref=GenBank:WP_002210432.1;Name=WP_002210432.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210432.1;locus_tag=YPIP275_RS10665;product=D-alanine--D-alanine ligase;protein_id=WP_002210432.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 98920 100395 . - . ID=gene-YPIP275_RS10670;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=YPIP275_RS10670;old_locus_tag=YPIP275_2531 NZ_AAOS02000010.1 Protein Homology CDS 98920 100395 . - 0 ID=cds-WP_002216457.1;Parent=gene-YPIP275_RS10670;Dbxref=GenBank:WP_002216457.1;Name=WP_002216457.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004932766.1;locus_tag=YPIP275_RS10670;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_002216457.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 100533 101603 . - . ID=gene-YPIP275_RS10675;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=YPIP275_RS10675;old_locus_tag=YPIP275_2532 NZ_AAOS02000010.1 Protein Homology CDS 100533 101603 . - 0 ID=cds-WP_002210434.1;Parent=gene-YPIP275_RS10675;Dbxref=GenBank:WP_002210434.1;Name=WP_002210434.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906408.1;locus_tag=YPIP275_RS10675;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_002210434.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 101600 102802 . - . ID=gene-YPIP275_RS10680;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=YPIP275_RS10680;old_locus_tag=YPIP275_2533 NZ_AAOS02000010.1 Protein Homology CDS 101600 102802 . - 0 ID=cds-WP_002210435.1;Parent=gene-YPIP275_RS10680;Dbxref=GenBank:WP_002210435.1;Name=WP_002210435.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210435.1;locus_tag=YPIP275_RS10680;product=cell division protein FtsW;protein_id=WP_002210435.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 102802 104118 . - . ID=gene-YPIP275_RS10685;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=YPIP275_RS10685;old_locus_tag=YPIP275_2534 NZ_AAOS02000010.1 Protein Homology CDS 102802 104118 . - 0 ID=cds-WP_002210436.1;Parent=gene-YPIP275_RS10685;Dbxref=GenBank:WP_002210436.1;Name=WP_002210436.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105672.1;locus_tag=YPIP275_RS10685;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_002210436.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 104121 105203 . - . ID=gene-YPIP275_RS10690;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=YPIP275_RS10690;old_locus_tag=YPIP275_2535 NZ_AAOS02000010.1 Protein Homology CDS 104121 105203 . - 0 ID=cds-WP_002210437.1;Parent=gene-YPIP275_RS10690;Dbxref=GenBank:WP_002210437.1;Name=WP_002210437.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=YPIP275_RS10690;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_002210437.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 105197 106573 . - . ID=gene-YPIP275_RS10695;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=YPIP275_RS10695;old_locus_tag=YPIP275_2536 NZ_AAOS02000010.1 Protein Homology CDS 105197 106573 . - 0 ID=cds-WP_002210438.1;Parent=gene-YPIP275_RS10695;Dbxref=GenBank:WP_002210438.1;Name=WP_002210438.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191733.1;locus_tag=YPIP275_RS10695;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_002210438.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 106570 108057 . - . ID=gene-YPIP275_RS10700;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=YPIP275_RS10700;old_locus_tag=YPIP275_2537 NZ_AAOS02000010.1 Protein Homology CDS 106570 108057 . - 0 ID=cds-WP_002210439.1;Parent=gene-YPIP275_RS10700;Dbxref=GenBank:WP_002210439.1;Name=WP_002210439.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210439.1;locus_tag=YPIP275_RS10700;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_002210439.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 108044 109807 . - . ID=gene-YPIP275_RS10705;Name=YPIP275_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10705;old_locus_tag=YPIP275_2538 NZ_AAOS02000010.1 Protein Homology CDS 108044 109807 . - 0 ID=cds-WP_002210440.1;Parent=gene-YPIP275_RS10705;Dbxref=GenBank:WP_002210440.1;Name=WP_002210440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388992.1;locus_tag=YPIP275_RS10705;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_002210440.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 109873 110190 . - . ID=gene-YPIP275_RS10710;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=YPIP275_RS10710;old_locus_tag=YPIP275_2539 NZ_AAOS02000010.1 Protein Homology CDS 109873 110190 . - 0 ID=cds-WP_002210441.1;Parent=gene-YPIP275_RS10710;Dbxref=GenBank:WP_002210441.1;Name=WP_002210441.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210441.1;locus_tag=YPIP275_RS10710;product=cell division protein FtsL;protein_id=WP_002210441.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 110187 111149 . - . ID=gene-YPIP275_RS10715;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=YPIP275_RS10715;old_locus_tag=YPIP275_2540 NZ_AAOS02000010.1 Protein Homology CDS 110187 111149 . - 0 ID=cds-WP_002210442.1;Parent=gene-YPIP275_RS10715;Dbxref=GenBank:WP_002210442.1;Name=WP_002210442.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210442.1;locus_tag=YPIP275_RS10715;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_002210442.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 111152 111610 . - . ID=gene-YPIP275_RS10720;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=YPIP275_RS10720;old_locus_tag=YPIP275_2541 NZ_AAOS02000010.1 Protein Homology CDS 111152 111610 . - 0 ID=cds-WP_002210443.1;Parent=gene-YPIP275_RS10720;Dbxref=GenBank:WP_002210443.1;Name=WP_002210443.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167064.1;locus_tag=YPIP275_RS10720;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_002210443.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 112165 112254 . - . ID=gene-YPIP275_RS28640;Name=YPIP275_RS28640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28640 NZ_AAOS02000010.1 Protein Homology CDS 112165 112254 . - 0 ID=cds-WP_087768171.1;Parent=gene-YPIP275_RS28640;Dbxref=GenBank:WP_087768171.1;Name=WP_087768171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264692.1;locus_tag=YPIP275_RS28640;product=gluconate 5-dehydrogenase;protein_id=WP_087768171.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 112712 113152 . + . ID=gene-YPIP275_RS10725;Name=YPIP275_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10725;old_locus_tag=YPIP275_2544 NZ_AAOS02000010.1 Protein Homology CDS 112712 113152 . + 0 ID=cds-WP_002210446.1;Parent=gene-YPIP275_RS10725;Dbxref=GenBank:WP_002210446.1;Name=WP_002210446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210446.1;locus_tag=YPIP275_RS10725;product=L-alanine exporter AlaE;protein_id=WP_002210446.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 113283 114293 . - . ID=gene-YPIP275_RS10730;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=YPIP275_RS10730;old_locus_tag=YPIP275_2545 NZ_AAOS02000010.1 Protein Homology CDS 113283 114293 . - 0 ID=cds-WP_002210447.1;Parent=gene-YPIP275_RS10730;Dbxref=GenBank:WP_002210447.1;Name=WP_002210447.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191729.1;locus_tag=YPIP275_RS10730;product=catabolite repressor/activator;protein_id=WP_002210447.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 114798 115256 . - . ID=gene-YPIP275_RS10740;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10740;old_locus_tag=YPIP275_2546 NZ_AAOS02000010.1 Protein Homology CDS 114798 115256 . - 0 ID=cds-WP_002213759.1-21;Parent=gene-YPIP275_RS10740;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS10740;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 115455 115949 . - . ID=gene-YPIP275_RS10745;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=YPIP275_RS10745;old_locus_tag=YPIP275_2547 NZ_AAOS02000010.1 Protein Homology CDS 115455 115949 . - 0 ID=cds-WP_002210448.1;Parent=gene-YPIP275_RS10745;Dbxref=GenBank:WP_002210448.1;Name=WP_002210448.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875571.1;locus_tag=YPIP275_RS10745;product=acetolactate synthase small subunit;protein_id=WP_002210448.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 115952 117679 . - . ID=gene-YPIP275_RS10750;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=YPIP275_RS10750;old_locus_tag=YPIP275_2548 NZ_AAOS02000010.1 Protein Homology CDS 115952 117679 . - 0 ID=cds-WP_002228103.1;Parent=gene-YPIP275_RS10750;Dbxref=GenBank:WP_002228103.1;Name=WP_002228103.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025294.2;locus_tag=YPIP275_RS10750;product=acetolactate synthase 3 large subunit;protein_id=WP_002228103.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 118139 119944 . - . ID=gene-YPIP275_RS10760;Name=YPIP275_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10760;old_locus_tag=YPIP275_2549 NZ_AAOS02000010.1 Protein Homology CDS 118139 119944 . - 0 ID=cds-WP_002216437.1;Parent=gene-YPIP275_RS10760;Dbxref=GenBank:WP_002216437.1;Name=WP_002216437.1;Ontology_term=GO:0005524,GO:0015645;gbkey=CDS;go_function=ATP binding|0005524||IEA,fatty acid ligase activity|0015645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216437.1;locus_tag=YPIP275_RS10760;product=AMP-dependent synthetase/ligase;protein_id=WP_002216437.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 120481 121437 . - . ID=gene-YPIP275_RS10770;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=YPIP275_RS10770;old_locus_tag=YPIP275_2550 NZ_AAOS02000010.1 Protein Homology CDS 120481 121437 . - 0 ID=cds-WP_002216434.1;Parent=gene-YPIP275_RS10770;Dbxref=GenBank:WP_002216434.1;Name=WP_002216434.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216434.1;locus_tag=YPIP275_RS10770;product=transcriptional regulator LeuO;protein_id=WP_002216434.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 122115 122330 . + . ID=gene-YPIP275_RS10775;Name=YPIP275_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10775;old_locus_tag=YPIP275_2551 NZ_AAOS02000010.1 Protein Homology CDS 122115 122330 . + 0 ID=cds-WP_002210452.1;Parent=gene-YPIP275_RS10775;Dbxref=GenBank:WP_002210452.1;Name=WP_002210452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210452.1;locus_tag=YPIP275_RS10775;product=hypothetical protein;protein_id=WP_002210452.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 122759 123217 . + . ID=gene-YPIP275_RS10785;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10785;old_locus_tag=YPIP275_2552 NZ_AAOS02000010.1 Protein Homology CDS 122759 123217 . + 0 ID=cds-WP_002213775.1-23;Parent=gene-YPIP275_RS10785;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS10785;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 123364 124926 . + . ID=gene-YPIP275_RS10790;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10790;old_locus_tag=YPIP275_2553 NZ_AAOS02000010.1 Protein Homology CDS 123364 124926 . + 0 ID=cds-WP_002210453.1;Parent=gene-YPIP275_RS10790;Dbxref=GenBank:WP_002210453.1;Name=WP_002210453.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005196.1;locus_tag=YPIP275_RS10790;product=2-isopropylmalate synthase;protein_id=WP_002210453.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 124929 126020 . + . ID=gene-YPIP275_RS10795;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=YPIP275_RS10795;old_locus_tag=YPIP275_2554 NZ_AAOS02000010.1 Protein Homology CDS 124929 126020 . + 0 ID=cds-WP_002210454.1;Parent=gene-YPIP275_RS10795;Dbxref=GenBank:WP_002210454.1;Name=WP_002210454.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105676.1;locus_tag=YPIP275_RS10795;product=3-isopropylmalate dehydrogenase;protein_id=WP_002210454.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 126022 127452 . + . ID=gene-YPIP275_RS10800;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=YPIP275_RS10800;old_locus_tag=YPIP275_2555 NZ_AAOS02000010.1 Protein Homology CDS 126022 127452 . + 0 ID=cds-WP_002210455.1;Parent=gene-YPIP275_RS10800;Dbxref=GenBank:WP_002210455.1;Name=WP_002210455.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210455.1;locus_tag=YPIP275_RS10800;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_002210455.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 127467 128069 . + . ID=gene-YPIP275_RS10805;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=YPIP275_RS10805;old_locus_tag=YPIP275_2556 NZ_AAOS02000010.1 Protein Homology CDS 127467 128069 . + 0 ID=cds-WP_002210456.1;Parent=gene-YPIP275_RS10805;Dbxref=GenBank:WP_002210456.1;Name=WP_002210456.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105677.1;locus_tag=YPIP275_RS10805;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_002210456.1;transl_table=11 NZ_AAOS02000010.1 RefSeq pseudogene 128310 128561 . - . ID=gene-YPIP275_RS10810;Name=YPIP275_RS10810;end_range=128561,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS10810;old_locus_tag=YPIP275_2558;partial=true;pseudo=true NZ_AAOS02000010.1 Protein Homology CDS 128310 128561 . - 0 ID=cds-YPIP275_RS10810;Parent=gene-YPIP275_RS10810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=128561,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080523.1;locus_tag=YPIP275_RS10810;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 128649 129671 . + . ID=gene-YPIP275_RS10815;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10815;old_locus_tag=YPIP275_2559 NZ_AAOS02000010.1 Protein Homology CDS 128649 129671 . + 0 ID=cds-WP_000255944.1-27;Parent=gene-YPIP275_RS10815;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS10815;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 129668 130450 . + . ID=gene-YPIP275_RS10820;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS10820;old_locus_tag=YPIP275_2560 NZ_AAOS02000010.1 Protein Homology CDS 129668 130450 . + 0 ID=cds-WP_001317493.1-32;Parent=gene-YPIP275_RS10820;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS10820;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000010.1 RefSeq pseudogene 130518 131450 . - . ID=gene-YPIP275_RS10825;Name=YPIP275_RS10825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS10825;old_locus_tag=YPIP275_2561;partial=true;pseudo=true;start_range=.,130518 NZ_AAOS02000010.1 Protein Homology CDS 130518 131450 . - 0 ID=cds-YPIP275_RS10825;Parent=gene-YPIP275_RS10825;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080523.1;locus_tag=YPIP275_RS10825;partial=true;product=MFS transporter;pseudo=true;start_range=.,130518;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 132114 133775 . + . ID=gene-YPIP275_RS10835;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=YPIP275_RS10835;old_locus_tag=YPIP275_2563 NZ_AAOS02000010.1 Protein Homology CDS 132114 133775 . + 0 ID=cds-WP_002210461.1;Parent=gene-YPIP275_RS10835;Dbxref=GenBank:WP_002210461.1;Name=WP_002210461.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191725.1;locus_tag=YPIP275_RS10835;product=HTH-type transcriptional regulator SgrR;protein_id=WP_002210461.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 133876 134160 . - . ID=gene-YPIP275_RS10840;Name=YPIP275_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10840 NZ_AAOS02000010.1 Protein Homology CDS 133876 134160 . - 0 ID=cds-WP_002214269.1;Parent=gene-YPIP275_RS10840;Dbxref=GenBank:WP_002214269.1;Name=WP_002214269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214269.1;locus_tag=YPIP275_RS10840;product=hypothetical protein;protein_id=WP_002214269.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 134715 135707 . + . ID=gene-YPIP275_RS10845;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=YPIP275_RS10845;old_locus_tag=YPIP275_2564 NZ_AAOS02000010.1 Protein Homology CDS 134715 135707 . + 0 ID=cds-WP_002214274.1;Parent=gene-YPIP275_RS10845;Dbxref=GenBank:WP_002214274.1;Name=WP_002214274.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214274.1;locus_tag=YPIP275_RS10845;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_002214274.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 135683 137290 . + . ID=gene-YPIP275_RS10850;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=YPIP275_RS10850;old_locus_tag=YPIP275_2565 NZ_AAOS02000010.1 Protein Homology CDS 135683 137290 . + 0 ID=cds-WP_002214276.1;Parent=gene-YPIP275_RS10850;Dbxref=GenBank:WP_002214276.1;Name=WP_002214276.1;Ontology_term=GO:0015888,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=thiP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=thiamine transport|0015888||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214276.1;locus_tag=YPIP275_RS10850;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_002214276.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 137277 137987 . + . ID=gene-YPIP275_RS10855;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS10855;old_locus_tag=YPIP275_2566 NZ_AAOS02000010.1 Protein Homology CDS 137277 137987 . + 0 ID=cds-WP_002210464.1;Parent=gene-YPIP275_RS10855;Dbxref=GenBank:WP_002210464.1;Name=WP_002210464.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210464.1;locus_tag=YPIP275_RS10855;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_002210464.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 138056 138823 . - . ID=gene-YPIP275_RS10860;Name=YPIP275_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10860;old_locus_tag=YPIP275_2567 NZ_AAOS02000010.1 Protein Homology CDS 138056 138823 . - 0 ID=cds-WP_002210465.1;Parent=gene-YPIP275_RS10860;Dbxref=GenBank:WP_002210465.1;Name=WP_002210465.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210465.1;locus_tag=YPIP275_RS10860;product=DedA family protein;protein_id=WP_002210465.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 139019 141388 . + . ID=gene-YPIP275_RS10865;Name=YPIP275_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10865;old_locus_tag=YPIP275_2568 NZ_AAOS02000010.1 Protein Homology CDS 139019 141388 . + 0 ID=cds-WP_002210466.1;Parent=gene-YPIP275_RS10865;Dbxref=GenBank:WP_002210466.1;Name=WP_002210466.1;Ontology_term=GO:0000166,GO:0003676,GO:0003887;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleic acid binding|0003676||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105679.1;locus_tag=YPIP275_RS10865;product=DNA polymerase II;protein_id=WP_002210466.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 141833 144739 . + . ID=gene-YPIP275_RS10870;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10870;old_locus_tag=YPIP275_2569 NZ_AAOS02000010.1 Protein Homology CDS 141833 144739 . + 0 ID=cds-WP_002210467.1;Parent=gene-YPIP275_RS10870;Dbxref=GenBank:WP_002210467.1;Name=WP_002210467.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=YPIP275_RS10870;product=RNA polymerase-associated protein RapA;protein_id=WP_002210467.1;transl_table=11 NZ_AAOS02000010.1 RefSeq pseudogene 144783 144851 . - . ID=gene-YPIP275_RS28645;Name=YPIP275_RS28645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28645;partial=true;pseudo=true;start_range=.,144783 NZ_AAOS02000010.1 Protein Homology CDS 144783 144851 . - 0 ID=cds-YPIP275_RS28645;Parent=gene-YPIP275_RS28645;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=YPIP275_RS28645;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;start_range=.,144783;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 144995 145348 . - . ID=gene-YPIP275_RS10875;Name=YPIP275_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10875;old_locus_tag=YPIP275_2570 NZ_AAOS02000010.1 Protein Homology CDS 144995 145348 . - 0 ID=cds-WP_002210468.1;Parent=gene-YPIP275_RS10875;Dbxref=GenBank:WP_002210468.1;Name=WP_002210468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210468.1;locus_tag=YPIP275_RS10875;product=DUF6277 family protein;protein_id=WP_002210468.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 145370 148810 . - . ID=gene-YPIP275_RS10880;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=YPIP275_RS10880;old_locus_tag=YPIP275_2571 NZ_AAOS02000010.1 Protein Homology CDS 145370 148810 . - 0 ID=cds-WP_002214734.1;Parent=gene-YPIP275_RS10880;Dbxref=GenBank:WP_002214734.1;Name=WP_002214734.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214734.1;locus_tag=YPIP275_RS10880;product=type VI secretion system membrane subunit TssM;protein_id=WP_002214734.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 148872 150482 . - . ID=gene-YPIP275_RS10885;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=YPIP275_RS10885;old_locus_tag=YPIP275_2572 NZ_AAOS02000010.1 Protein Homology CDS 148872 150482 . - 0 ID=cds-WP_002210469.1;Parent=gene-YPIP275_RS10885;Dbxref=GenBank:WP_002210469.1;Name=WP_002210469.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210469.1;locus_tag=YPIP275_RS10885;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_002210469.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 150479 151834 . - . ID=gene-YPIP275_RS10890;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=YPIP275_RS10890;old_locus_tag=YPIP275_2573 NZ_AAOS02000010.1 Protein Homology CDS 150479 151834 . - 0 ID=cds-WP_002210470.1;Parent=gene-YPIP275_RS10890;Dbxref=GenBank:WP_002210470.1;Name=WP_002210470.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210470.1;locus_tag=YPIP275_RS10890;product=type VI secretion system baseplate subunit TssK;protein_id=WP_002210470.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 151954 152445 . - . ID=gene-YPIP275_RS10895;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS10895;old_locus_tag=YPIP275_2574 NZ_AAOS02000010.1 Protein Homology CDS 151954 152445 . - 0 ID=cds-WP_002210471.1;Parent=gene-YPIP275_RS10895;Dbxref=GenBank:WP_002210471.1;Name=WP_002210471.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304592.1;locus_tag=YPIP275_RS10895;product=type VI secretion system lipoprotein TssJ;protein_id=WP_002210471.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 152438 152803 . - . ID=gene-YPIP275_RS10900;Name=YPIP275_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10900 NZ_AAOS02000010.1 Protein Homology CDS 152438 152803 . - 0 ID=cds-WP_002214737.1;Parent=gene-YPIP275_RS10900;Dbxref=GenBank:WP_002214737.1;Name=WP_002214737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214737.1;locus_tag=YPIP275_RS10900;product=PAAR-like domain-containing protein;protein_id=WP_002214737.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 152809 153426 . - . ID=gene-YPIP275_RS10905;Name=YPIP275_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10905;old_locus_tag=YPIP275_2575 NZ_AAOS02000010.1 Protein Homology CDS 152809 153426 . - 0 ID=cds-WP_002210473.1;Parent=gene-YPIP275_RS10905;Dbxref=GenBank:WP_002210473.1;Name=WP_002210473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210473.1;locus_tag=YPIP275_RS10905;product=DUF3540 domain-containing protein;protein_id=WP_002210473.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 153419 154522 . - . ID=gene-YPIP275_RS10910;Name=YPIP275_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10910;old_locus_tag=YPIP275_2577 NZ_AAOS02000010.1 Protein Homology CDS 153419 154522 . - 0 ID=cds-WP_002214739.1;Parent=gene-YPIP275_RS10910;Dbxref=GenBank:WP_002214739.1;Name=WP_002214739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214739.1;locus_tag=YPIP275_RS10910;product=pentapeptide repeat-containing protein;protein_id=WP_002214739.1;transl_table=11 NZ_AAOS02000010.1 RefSeq pseudogene 154548 156767 . - . ID=gene-YPIP275_RS29225;Name=YPIP275_RS29225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29225;old_locus_tag=YPIP275_2578;pseudo=true NZ_AAOS02000010.1 Protein Homology CDS 154548 156767 . - 0 ID=cds-YPIP275_RS29225;Parent=gene-YPIP275_RS29225;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021456.7;locus_tag=YPIP275_RS29225;product=DUF2169 family type VI secretion system accessory protein;pseudo=true;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 156780 159128 . - . ID=gene-YPIP275_RS10925;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=YPIP275_RS10925;old_locus_tag=YPIP275_2580 NZ_AAOS02000010.1 Protein Homology CDS 156780 159128 . - 0 ID=cds-WP_002210474.1;Parent=gene-YPIP275_RS10925;Dbxref=GenBank:WP_002210474.1;Name=WP_002210474.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105682.1;locus_tag=YPIP275_RS10925;product=type VI secretion system tip protein VgrG;protein_id=WP_002210474.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 159232 161820 . - . ID=gene-YPIP275_RS10930;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=YPIP275_RS10930;old_locus_tag=YPIP275_2581 NZ_AAOS02000010.1 Protein Homology CDS 159232 161820 . - 0 ID=cds-WP_002210475.1;Parent=gene-YPIP275_RS10930;Dbxref=GenBank:WP_002210475.1;Name=WP_002210475.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413471.1;locus_tag=YPIP275_RS10930;product=type VI secretion system ATPase TssH;protein_id=WP_002210475.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 161838 162821 . - . ID=gene-YPIP275_RS10935;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=YPIP275_RS10935;old_locus_tag=YPIP275_2582 NZ_AAOS02000010.1 Protein Homology CDS 161838 162821 . - 0 ID=cds-WP_002210476.1;Parent=gene-YPIP275_RS10935;Dbxref=GenBank:WP_002210476.1;Name=WP_002210476.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304593.1;locus_tag=YPIP275_RS10935;product=type VI secretion system baseplate subunit TssG;protein_id=WP_002210476.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 162814 164658 . - . ID=gene-YPIP275_RS10940;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=YPIP275_RS10940;old_locus_tag=YPIP275_2583 NZ_AAOS02000010.1 Protein Homology CDS 162814 164658 . - 0 ID=cds-WP_002210477.1;Parent=gene-YPIP275_RS10940;Dbxref=GenBank:WP_002210477.1;Name=WP_002210477.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304594.1;locus_tag=YPIP275_RS10940;product=type VI secretion system baseplate subunit TssF;protein_id=WP_002210477.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 164691 165134 . - . ID=gene-YPIP275_RS10945;Name=YPIP275_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10945;old_locus_tag=YPIP275_2584 NZ_AAOS02000010.1 Protein Homology CDS 164691 165134 . - 0 ID=cds-WP_002210478.1;Parent=gene-YPIP275_RS10945;Dbxref=GenBank:WP_002210478.1;Name=WP_002210478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210478.1;locus_tag=YPIP275_RS10945;product=type VI secretion system baseplate subunit TssE;protein_id=WP_002210478.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 165208 165726 . - . ID=gene-YPIP275_RS10950;Name=YPIP275_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10950;old_locus_tag=YPIP275_2585 NZ_AAOS02000010.1 Protein Homology CDS 165208 165726 . - 0 ID=cds-WP_002210479.1;Parent=gene-YPIP275_RS10950;Dbxref=GenBank:WP_002210479.1;Name=WP_002210479.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210479.1;locus_tag=YPIP275_RS10950;product=Hcp family type VI secretion system effector;protein_id=WP_002210479.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 165889 167391 . - . ID=gene-YPIP275_RS10955;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=YPIP275_RS10955;old_locus_tag=YPIP275_2586 NZ_AAOS02000010.1 Protein Homology CDS 165889 167391 . - 0 ID=cds-WP_002210480.1;Parent=gene-YPIP275_RS10955;Dbxref=GenBank:WP_002210480.1;Name=WP_002210480.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210480.1;locus_tag=YPIP275_RS10955;product=type VI secretion system contractile sheath large subunit;protein_id=WP_002210480.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 167400 167960 . - . ID=gene-YPIP275_RS10960;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=YPIP275_RS10960;old_locus_tag=YPIP275_2587 NZ_AAOS02000010.1 Protein Homology CDS 167400 167960 . - 0 ID=cds-WP_002210481.1;Parent=gene-YPIP275_RS10960;Dbxref=GenBank:WP_002210481.1;Name=WP_002210481.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210481.1;locus_tag=YPIP275_RS10960;product=type VI secretion system contractile sheath small subunit;protein_id=WP_002210481.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 167971 168984 . - . ID=gene-YPIP275_RS10965;Name=YPIP275_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10965;old_locus_tag=YPIP275_2588 NZ_AAOS02000010.1 Protein Homology CDS 167971 168984 . - 0 ID=cds-WP_002210482.1;Parent=gene-YPIP275_RS10965;Dbxref=GenBank:WP_002210482.1;Name=WP_002210482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229122.1;locus_tag=YPIP275_RS10965;product=type VI secretion system protein TssA;protein_id=WP_002210482.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 169314 170057 . + . ID=gene-YPIP275_RS10970;Name=rovC;gbkey=Gene;gene=rovC;gene_biotype=protein_coding;locus_tag=YPIP275_RS10970;old_locus_tag=YPIP275_2589 NZ_AAOS02000010.1 Protein Homology CDS 169314 170057 . + 0 ID=cds-WP_002214747.1;Parent=gene-YPIP275_RS10970;Dbxref=GenBank:WP_002214747.1;Name=WP_002214747.1;Note=RovC was described as a transcriptional activator for a type VI secretion system (T6SS).;gbkey=CDS;gene=rovC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214747.1;locus_tag=YPIP275_RS10970;product=hexameric transcriptional regulator RovC;protein_id=WP_002214747.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 171280 171900 . + . ID=gene-YPIP275_RS10975;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10975;old_locus_tag=YPIP275_2591 NZ_AAOS02000010.1 Protein Homology CDS 171280 171900 . + 0 ID=cds-WP_002210485.1;Parent=gene-YPIP275_RS10975;Dbxref=GenBank:WP_002210485.1;Name=WP_002210485.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210485.1;locus_tag=YPIP275_RS10975;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_002210485.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 172198 173031 . - . ID=gene-YPIP275_RS10980;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10980;old_locus_tag=YPIP275_2592 NZ_AAOS02000010.1 Protein Homology CDS 172198 173031 . - 0 ID=cds-WP_002210486.1;Parent=gene-YPIP275_RS10980;Dbxref=GenBank:WP_002210486.1;Name=WP_002210486.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304596.1;locus_tag=YPIP275_RS10980;product=co-chaperone DjlA;protein_id=WP_002210486.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 173216 175558 . + . ID=gene-YPIP275_RS10985;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=YPIP275_RS10985;old_locus_tag=YPIP275_2593 NZ_AAOS02000010.1 Protein Homology CDS 173216 175558 . + 0 ID=cds-WP_002228111.1;Parent=gene-YPIP275_RS10985;Dbxref=GenBank:WP_002228111.1;Name=WP_002228111.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674007.1;locus_tag=YPIP275_RS10985;product=LPS assembly protein LptD;protein_id=WP_002228111.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 175626 176930 . + . ID=gene-YPIP275_RS10990;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10990;old_locus_tag=YPIP275_2594 NZ_AAOS02000010.1 Protein Homology CDS 175626 176930 . + 0 ID=cds-WP_002210488.1;Parent=gene-YPIP275_RS10990;Dbxref=GenBank:WP_002210488.1;Name=WP_002210488.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0003755,GO:0042277,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005193017.1;locus_tag=YPIP275_RS10990;product=peptidylprolyl isomerase SurA;protein_id=WP_002210488.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 176914 177909 . + . ID=gene-YPIP275_RS10995;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10995;old_locus_tag=YPIP275_2595 NZ_AAOS02000010.1 Protein Homology CDS 176914 177909 . + 0 ID=cds-WP_002210489.1;Parent=gene-YPIP275_RS10995;Dbxref=GenBank:WP_002210489.1;Name=WP_002210489.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167004.1;locus_tag=YPIP275_RS10995;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_002210489.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 177902 178720 . + . ID=gene-YPIP275_RS11000;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=YPIP275_RS11000;old_locus_tag=YPIP275_2596 NZ_AAOS02000010.1 Protein Homology CDS 177902 178720 . + 0 ID=cds-WP_002210490.1;Parent=gene-YPIP275_RS11000;Dbxref=GenBank:WP_002210490.1;Name=WP_002210490.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005175.1;locus_tag=YPIP275_RS11000;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_002210490.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 178734 179111 . + . ID=gene-YPIP275_RS11005;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;gene_synonym=corD;locus_tag=YPIP275_RS11005;old_locus_tag=YPIP275_2597 NZ_AAOS02000010.1 Protein Homology CDS 178734 179111 . + 0 ID=cds-WP_002210491.1;Parent=gene-YPIP275_RS11005;Dbxref=GenBank:WP_002210491.1;Name=WP_002210491.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095358.1;locus_tag=YPIP275_RS11005;product=Co2+/Mg2+ efflux facilitator ApaG/CorD;protein_id=WP_002210491.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 179128 179997 . + . ID=gene-YPIP275_RS11010;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=YPIP275_RS11010;old_locus_tag=YPIP275_2598 NZ_AAOS02000010.1 Protein Homology CDS 179128 179997 . + 0 ID=cds-WP_002210492.1;Parent=gene-YPIP275_RS11010;Dbxref=GenBank:WP_002210492.1;Name=WP_002210492.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210492.1;locus_tag=YPIP275_RS11010;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_002210492.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 180087 180551 . - . ID=gene-YPIP275_RS11015;Name=YPIP275_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11015;old_locus_tag=YPIP275_2599 NZ_AAOS02000010.1 Protein Homology CDS 180087 180551 . - 0 ID=cds-WP_002210493.1;Parent=gene-YPIP275_RS11015;Dbxref=GenBank:WP_002210493.1;Name=WP_002210493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191707.1;locus_tag=YPIP275_RS11015;product=DUF3757 domain-containing protein;protein_id=WP_002210493.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 180678 180992 . - . ID=gene-YPIP275_RS11020;Name=YPIP275_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11020;old_locus_tag=YPIP275_2600 NZ_AAOS02000010.1 Protein Homology CDS 180678 180992 . - 0 ID=cds-WP_071525509.1;Parent=gene-YPIP275_RS11020;Dbxref=GenBank:WP_071525509.1;Name=WP_071525509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304599.1;locus_tag=YPIP275_RS11020;product=DUF3757 domain-containing protein;protein_id=WP_071525509.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 181434 181892 . - . ID=gene-YPIP275_RS11025;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS11025;old_locus_tag=YPIP275_2603 NZ_AAOS02000010.1 Protein Homology CDS 181434 181892 . - 0 ID=cds-WP_002213775.1-24;Parent=gene-YPIP275_RS11025;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS11025;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 182104 182586 . - . ID=gene-YPIP275_RS11030;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=YPIP275_RS11030;old_locus_tag=YPIP275_2604 NZ_AAOS02000010.1 Protein Homology CDS 182104 182586 . - 0 ID=cds-WP_002210497.1;Parent=gene-YPIP275_RS11030;Dbxref=GenBank:WP_002210497.1;Name=WP_002210497.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005270605.1;locus_tag=YPIP275_RS11030;product=type 3 dihydrofolate reductase;protein_id=WP_002210497.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 182736 183191 . - . ID=gene-YPIP275_RS11035;Name=YPIP275_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11035;old_locus_tag=YPIP275_2605 NZ_AAOS02000010.1 Protein Homology CDS 182736 183191 . - 0 ID=cds-WP_002210498.1;Parent=gene-YPIP275_RS11035;Dbxref=GenBank:WP_002210498.1;Name=WP_002210498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210498.1;locus_tag=YPIP275_RS11035;product=threonine/serine exporter;protein_id=WP_002210498.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 183188 183988 . - . ID=gene-YPIP275_RS11040;Name=YPIP275_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11040;old_locus_tag=YPIP275_2606 NZ_AAOS02000010.1 Protein Homology CDS 183188 183988 . - 0 ID=cds-WP_002210499.1;Parent=gene-YPIP275_RS11040;Dbxref=GenBank:WP_002210499.1;Name=WP_002210499.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210499.1;locus_tag=YPIP275_RS11040;product=threonine/serine exporter family protein;protein_id=WP_002210499.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 184312 184926 . + . ID=gene-YPIP275_RS11045;Name=YPIP275_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS11045;old_locus_tag=YPIP275_2608 NZ_AAOS02000010.1 Protein Homology CDS 184312 184926 . + 0 ID=cds-WP_002210501.1;Parent=gene-YPIP275_RS11045;Dbxref=GenBank:WP_002210501.1;Name=WP_002210501.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105689.1;locus_tag=YPIP275_RS11045;product=LysE family transporter;protein_id=WP_002210501.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 185154 188387 . - . ID=gene-YPIP275_RS11050;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=YPIP275_RS11050;old_locus_tag=YPIP275_2609 NZ_AAOS02000010.1 Protein Homology CDS 185154 188387 . - 0 ID=cds-WP_002210502.1;Parent=gene-YPIP275_RS11050;Dbxref=GenBank:WP_002210502.1;Name=WP_002210502.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210502.1;locus_tag=YPIP275_RS11050;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_002210502.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 188403 189578 . - . ID=gene-YPIP275_RS11055;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=YPIP275_RS11055;old_locus_tag=YPIP275_2610 NZ_AAOS02000010.1 Protein Homology CDS 188403 189578 . - 0 ID=cds-WP_002224759.1;Parent=gene-YPIP275_RS11055;Dbxref=GenBank:WP_002224759.1;Name=WP_002224759.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224759.1;locus_tag=YPIP275_RS11055;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_002224759.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 190051 190872 . - . ID=gene-YPIP275_RS11060;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=YPIP275_RS11060;old_locus_tag=YPIP275_2611 NZ_AAOS02000010.1 Protein Homology CDS 190051 190872 . - 0 ID=cds-WP_002210504.1;Parent=gene-YPIP275_RS11060;Dbxref=GenBank:WP_002210504.1;Name=WP_002210504.1;Ontology_term=GO:0009085,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase activity|0008839||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715936.1;locus_tag=YPIP275_RS11060;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_002210504.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 191325 191783 . - . ID=gene-YPIP275_RS11065;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS11065;old_locus_tag=YPIP275_2612 NZ_AAOS02000010.1 Protein Homology CDS 191325 191783 . - 0 ID=cds-WP_002213775.1-25;Parent=gene-YPIP275_RS11065;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS11065;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 192165 193118 . - . ID=gene-YPIP275_RS11080;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=YPIP275_RS11080;old_locus_tag=YPIP275_2614 NZ_AAOS02000010.1 Protein Homology CDS 192165 193118 . - 0 ID=cds-WP_002210506.1;Parent=gene-YPIP275_RS11080;Dbxref=GenBank:WP_002210506.1;Name=WP_002210506.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166985.1;locus_tag=YPIP275_RS11080;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_002210506.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 193099 193557 . - . ID=gene-YPIP275_RS11085;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=YPIP275_RS11085;old_locus_tag=YPIP275_2615 NZ_AAOS02000010.1 Protein Homology CDS 193099 193557 . - 0 ID=cds-WP_002228112.1;Parent=gene-YPIP275_RS11085;Dbxref=GenBank:WP_002228112.1;Name=WP_002228112.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105693.1;locus_tag=YPIP275_RS11085;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_002228112.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 193625 194134 . - . ID=gene-YPIP275_RS11090;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=YPIP275_RS11090;old_locus_tag=YPIP275_2616 NZ_AAOS02000010.1 Protein Homology CDS 193625 194134 . - 0 ID=cds-WP_002210508.1;Parent=gene-YPIP275_RS11090;Dbxref=GenBank:WP_002210508.1;Name=WP_002210508.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210508.1;locus_tag=YPIP275_RS11090;product=signal peptidase II;protein_id=WP_002210508.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 194134 196950 . - . ID=gene-YPIP275_RS11095;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=YPIP275_RS11095;old_locus_tag=YPIP275_2617 NZ_AAOS02000010.1 Protein Homology CDS 194134 196950 . - 0 ID=cds-WP_002210509.1;Parent=gene-YPIP275_RS11095;Dbxref=GenBank:WP_002210509.1;Name=WP_002210509.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705981.1;locus_tag=YPIP275_RS11095;product=isoleucine--tRNA ligase;protein_id=WP_002210509.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 196982 197920 . - . ID=gene-YPIP275_RS11100;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=YPIP275_RS11100;old_locus_tag=YPIP275_2618 NZ_AAOS02000010.1 Protein Homology CDS 196982 197920 . - 0 ID=cds-WP_002210510.1;Parent=gene-YPIP275_RS11100;Dbxref=GenBank:WP_002210510.1;Name=WP_002210510.1;Ontology_term=GO:0009231,GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166981.1;locus_tag=YPIP275_RS11100;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_002210510.1;transl_table=11 NZ_AAOS02000010.1 RefSeq gene 198335 198554 . + . ID=gene-YPIP275_RS11110;Name=rpsT;end_range=198554,.;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=YPIP275_RS11110;partial=true NZ_AAOS02000010.1 Protein Homology CDS 198335 198554 . + 0 ID=cds-WP_043940349.1;Parent=gene-YPIP275_RS11110;Dbxref=GenBank:WP_043940349.1;Name=WP_043940349.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;end_range=198554,.;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=YPIP275_RS11110;partial=true;product=30S ribosomal protein S20;protein_id=WP_043940349.1;transl_table=11 ##sequence-region NZ_AAOS02000009.1 1 200417 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000009.1 RefSeq region 1 200417 . + . ID=NZ_AAOS02000009.1:1..200417;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000009.1 RefSeq gene 115 3402 . - . ID=gene-YPIP275_RS09345;Name=cas3f;gbkey=Gene;gene=cas3f;gene_biotype=protein_coding;locus_tag=YPIP275_RS09345;old_locus_tag=YPIP275_0825 NZ_AAOS02000009.1 Protein Homology CDS 115 3402 . - 0 ID=cds-WP_002221142.1;Parent=gene-YPIP275_RS09345;Dbxref=GenBank:WP_002221142.1;Name=WP_002221142.1;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3f;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228501.1;locus_tag=YPIP275_RS09345;product=type I-F CRISPR-associated helicase Cas3f;protein_id=WP_002221142.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 3399 4379 . - . ID=gene-YPIP275_RS09350;Name=cas1f;gbkey=Gene;gene=cas1f;gene_biotype=protein_coding;locus_tag=YPIP275_RS09350;old_locus_tag=YPIP275_0826 NZ_AAOS02000009.1 Protein Homology CDS 3399 4379 . - 0 ID=cds-WP_002210191.1;Parent=gene-YPIP275_RS09350;Dbxref=GenBank:WP_002210191.1;Name=WP_002210191.1;Ontology_term=GO:0043571,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1f;go_function=DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210191.1;locus_tag=YPIP275_RS09350;product=type I-F CRISPR-associated endonuclease Cas1f;protein_id=WP_002210191.1;transl_table=11 NZ_AAOS02000009.1 RefSeq direct_repeat 4799 5247 . + . ID=id-NZ_AAOS02000009.1:4799..5247;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=4799..4826;rpt_unit_seq=tttctaagctgcctgtgcggcagtgaac NZ_AAOS02000009.1 RefSeq gene 5585 6829 . + . ID=gene-YPIP275_RS09355;Name=YPIP275_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09355;old_locus_tag=YPIP275_0827 NZ_AAOS02000009.1 Protein Homology CDS 5585 6829 . + 0 ID=cds-WP_002210192.1;Parent=gene-YPIP275_RS09355;Dbxref=GenBank:WP_002210192.1;Name=WP_002210192.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210192.1;locus_tag=YPIP275_RS09355;product=mechanosensitive ion channel family protein;protein_id=WP_002210192.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 7418 8074 . - . ID=gene-YPIP275_RS29210;Name=YPIP275_RS29210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29210 NZ_AAOS02000009.1 Protein Homology CDS 7418 8074 . - 0 ID=cds-WP_002365200.1;Parent=gene-YPIP275_RS29210;Dbxref=GenBank:WP_002365200.1;Name=WP_002365200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002365200.1;locus_tag=YPIP275_RS29210;product=hypothetical protein;protein_id=WP_002365200.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 8731 9846 . - . ID=gene-YPIP275_RS09365;Name=YPIP275_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09365;old_locus_tag=YPIP275_0829 NZ_AAOS02000009.1 Protein Homology CDS 8731 9846 . - 0 ID=cds-WP_002210194.1;Parent=gene-YPIP275_RS09365;Dbxref=GenBank:WP_002210194.1;Name=WP_002210194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104941.1;locus_tag=YPIP275_RS09365;product=hypothetical protein;protein_id=WP_002210194.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 9969 10907 . - . ID=gene-YPIP275_RS09370;Name=YPIP275_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09370;old_locus_tag=YPIP275_0830 NZ_AAOS02000009.1 Protein Homology CDS 9969 10907 . - 0 ID=cds-WP_002213840.1;Parent=gene-YPIP275_RS09370;Dbxref=GenBank:WP_002213840.1;Name=WP_002213840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303959.1;locus_tag=YPIP275_RS09370;product=MTP-1 family protein;protein_id=WP_002213840.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 10934 11989 . - . ID=gene-YPIP275_RS09375;Name=YPIP275_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09375;old_locus_tag=YPIP275_0831 NZ_AAOS02000009.1 Protein Homology CDS 10934 11989 . - 0 ID=cds-WP_002210196.1;Parent=gene-YPIP275_RS09375;Dbxref=GenBank:WP_002210196.1;Name=WP_002210196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683592.1;locus_tag=YPIP275_RS09375;product=glycoside hydrolase family 130 protein;protein_id=WP_002210196.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 12136 12960 . - . ID=gene-YPIP275_RS09380;Name=YPIP275_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09380;old_locus_tag=YPIP275_0832 NZ_AAOS02000009.1 Protein Homology CDS 12136 12960 . - 0 ID=cds-WP_002210197.1;Parent=gene-YPIP275_RS09380;Dbxref=GenBank:WP_002210197.1;Name=WP_002210197.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210197.1;locus_tag=YPIP275_RS09380;product=carbohydrate ABC transporter permease;protein_id=WP_002210197.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 12961 13836 . - . ID=gene-YPIP275_RS09385;Name=YPIP275_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09385;old_locus_tag=YPIP275_0833 NZ_AAOS02000009.1 Protein Homology CDS 12961 13836 . - 0 ID=cds-WP_002210198.1;Parent=gene-YPIP275_RS09385;Dbxref=GenBank:WP_002210198.1;Name=WP_002210198.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104939.1;locus_tag=YPIP275_RS09385;product=carbohydrate ABC transporter permease;protein_id=WP_002210198.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 13945 15231 . - . ID=gene-YPIP275_RS09390;Name=YPIP275_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09390;old_locus_tag=YPIP275_0834 NZ_AAOS02000009.1 Protein Homology CDS 13945 15231 . - 0 ID=cds-WP_002210199.1;Parent=gene-YPIP275_RS09390;Dbxref=GenBank:WP_002210199.1;Name=WP_002210199.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210199.1;locus_tag=YPIP275_RS09390;product=ABC transporter substrate-binding protein;protein_id=WP_002210199.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 15503 16543 . + . ID=gene-YPIP275_RS09395;Name=YPIP275_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09395;old_locus_tag=YPIP275_0835 NZ_AAOS02000009.1 Protein Homology CDS 15503 16543 . + 0 ID=cds-WP_002210200.1;Parent=gene-YPIP275_RS09395;Dbxref=GenBank:WP_002210200.1;Name=WP_002210200.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210200.1;locus_tag=YPIP275_RS09395;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002210200.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 16560 17948 . + . ID=gene-YPIP275_RS09400;Name=YPIP275_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09400;old_locus_tag=YPIP275_0836 NZ_AAOS02000009.1 Protein Homology CDS 16560 17948 . + 0 ID=cds-WP_002210201.1;Parent=gene-YPIP275_RS09400;Dbxref=GenBank:WP_002210201.1;Name=WP_002210201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210201.1;locus_tag=YPIP275_RS09400;product=phosphohexomutase domain-containing protein;protein_id=WP_002210201.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 18048 19127 . + . ID=gene-YPIP275_RS09405;Name=YPIP275_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09405;old_locus_tag=YPIP275_0837 NZ_AAOS02000009.1 Protein Homology CDS 18048 19127 . + 0 ID=cds-WP_002210202.1;Parent=gene-YPIP275_RS09405;Dbxref=GenBank:WP_002210202.1;Name=WP_002210202.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192635.1;locus_tag=YPIP275_RS09405;product=ABC transporter ATP-binding protein;protein_id=WP_002210202.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 19392 19844 . - . ID=gene-YPIP275_RS09410;Name=YPIP275_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09410;old_locus_tag=YPIP275_0839 NZ_AAOS02000009.1 Protein Homology CDS 19392 19844 . - 0 ID=cds-WP_002224304.1;Parent=gene-YPIP275_RS09410;Dbxref=GenBank:WP_002224304.1;Name=WP_002224304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224304.1;locus_tag=YPIP275_RS09410;product=hypothetical protein;protein_id=WP_002224304.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 20195 20587 . - . ID=gene-YPIP275_RS09415;Name=YPIP275_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09415;old_locus_tag=YPIP275_0840 NZ_AAOS02000009.1 Protein Homology CDS 20195 20587 . - 0 ID=cds-WP_002213832.1;Parent=gene-YPIP275_RS09415;Dbxref=GenBank:WP_002213832.1;Name=WP_002213832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213832.1;locus_tag=YPIP275_RS09415;product=hypothetical protein;protein_id=WP_002213832.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 20747 21151 . - . ID=gene-YPIP275_RS09420;Name=YPIP275_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09420 NZ_AAOS02000009.1 Protein Homology CDS 20747 21151 . - 0 ID=cds-WP_002213829.1;Parent=gene-YPIP275_RS09420;Dbxref=GenBank:WP_002213829.1;Name=WP_002213829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213829.1;locus_tag=YPIP275_RS09420;product=DUF4279 domain-containing protein;protein_id=WP_002213829.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 21161 21292 . - . ID=gene-YPIP275_RS29355;Name=YPIP275_RS29355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29355 NZ_AAOS02000009.1 Protein Homology CDS 21161 21292 . - 0 ID=cds-WP_226984133.1;Parent=gene-YPIP275_RS29355;Dbxref=GenBank:WP_226984133.1;Name=WP_226984133.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026871.8;locus_tag=YPIP275_RS29355;product=polymorphic toxin type 33 domain-containing protein;protein_id=WP_226984133.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 21663 21860 . - . ID=gene-YPIP275_RS09430;Name=YPIP275_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09430;old_locus_tag=YPIP275_0844 NZ_AAOS02000009.1 Protein Homology CDS 21663 21860 . - 0 ID=cds-WP_002210208.1;Parent=gene-YPIP275_RS09430;Dbxref=GenBank:WP_002210208.1;Name=WP_002210208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210208.1;locus_tag=YPIP275_RS09430;product=hypothetical protein;protein_id=WP_002210208.1;transl_table=11 NZ_AAOS02000009.1 RefSeq pseudogene 21870 23954 . - . ID=gene-YPIP275_RS09435;Name=YPIP275_RS09435;end_range=23954,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS09435;old_locus_tag=YPIP275_0845;partial=true;pseudo=true NZ_AAOS02000009.1 Protein Homology CDS 21870 23954 . - 0 ID=cds-YPIP275_RS09435;Parent=gene-YPIP275_RS09435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=23954,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171878.1;locus_tag=YPIP275_RS09435;partial=true;product=VENN motif pre-toxin domain-containing protein;pseudo=true;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 24079 24426 . - . ID=gene-YPIP275_RS09440;Name=YPIP275_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09440 NZ_AAOS02000009.1 Protein Homology CDS 24079 24426 . - 0 ID=cds-WP_016256369.1;Parent=gene-YPIP275_RS09440;Dbxref=GenBank:WP_016256369.1;Name=WP_016256369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256369.1;locus_tag=YPIP275_RS09440;product=hypothetical protein;protein_id=WP_016256369.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 24567 24818 . - . ID=gene-YPIP275_RS09445;Name=YPIP275_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09445 NZ_AAOS02000009.1 Protein Homology CDS 24567 24818 . - 0 ID=cds-WP_002213821.1;Parent=gene-YPIP275_RS09445;Dbxref=GenBank:WP_002213821.1;Name=WP_002213821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192636.1;locus_tag=YPIP275_RS09445;product=tRNase toxin domain-containing protein;protein_id=WP_002213821.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 24766 24909 . - . ID=gene-YPIP275_RS28580;Name=YPIP275_RS28580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28580 NZ_AAOS02000009.1 Protein Homology CDS 24766 24909 . - 0 ID=cds-WP_002359585.1;Parent=gene-YPIP275_RS28580;Dbxref=GenBank:WP_002359585.1;Name=WP_002359585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002359585.1;locus_tag=YPIP275_RS28580;product=hypothetical protein;protein_id=WP_002359585.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 25063 25572 . - . ID=gene-YPIP275_RS09450;Name=YPIP275_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09450;old_locus_tag=YPIP275_0846 NZ_AAOS02000009.1 Protein Homology CDS 25063 25572 . - 0 ID=cds-WP_002210211.1;Parent=gene-YPIP275_RS09450;Dbxref=GenBank:WP_002210211.1;Name=WP_002210211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210211.1;locus_tag=YPIP275_RS09450;product=DUF2247 family protein;protein_id=WP_002210211.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 25574 25771 . - . ID=gene-YPIP275_RS28585;Name=YPIP275_RS28585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28585 NZ_AAOS02000009.1 Protein Homology CDS 25574 25771 . - 0 ID=cds-WP_180207374.1;Parent=gene-YPIP275_RS28585;Dbxref=GenBank:WP_180207374.1;Name=WP_180207374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015740491.1;locus_tag=YPIP275_RS28585;product=hypothetical protein;protein_id=WP_180207374.1;transl_table=11 NZ_AAOS02000009.1 RefSeq pseudogene 26016 33170 . - . ID=gene-YPIP275_RS09455;Name=cdiA;gbkey=Gene;gene=cdiA;gene_biotype=pseudogene;locus_tag=YPIP275_RS09455;old_locus_tag=YPIP275_0848;partial=true;pseudo=true;start_range=.,26016 NZ_AAOS02000009.1 Protein Homology CDS 26016 33170 . - 0 ID=cds-YPIP275_RS09455;Parent=gene-YPIP275_RS09455;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=cdiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_050090717.1;locus_tag=YPIP275_RS09455;partial=true;product=contact-dependent inhibition toxin CdiA;pseudo=true;start_range=.,26016;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 33326 35014 . - . ID=gene-YPIP275_RS09460;Name=YPIP275_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09460;old_locus_tag=YPIP275_0849 NZ_AAOS02000009.1 Protein Homology CDS 33326 35014 . - 0 ID=cds-WP_002210212.1;Parent=gene-YPIP275_RS09460;Dbxref=GenBank:WP_002210212.1;Name=WP_002210212.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210212.1;locus_tag=YPIP275_RS09460;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_002210212.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 35666 36631 . - . ID=gene-YPIP275_RS09465;Name=YPIP275_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09465;old_locus_tag=YPIP275_0850 NZ_AAOS02000009.1 Protein Homology CDS 35666 36631 . - 0 ID=cds-WP_002213817.1;Parent=gene-YPIP275_RS09465;Dbxref=GenBank:WP_002213817.1;Name=WP_002213817.1;Ontology_term=GO:0010181,GO:0016491,GO:0046872,GO:0051537;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213817.1;locus_tag=YPIP275_RS09465;product=PDR/VanB family oxidoreductase;protein_id=WP_002213817.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 36727 37851 . - . ID=gene-YPIP275_RS09470;Name=YPIP275_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09470;old_locus_tag=YPIP275_0851 NZ_AAOS02000009.1 Protein Homology CDS 36727 37851 . - 0 ID=cds-WP_002213815.1;Parent=gene-YPIP275_RS09470;Dbxref=GenBank:WP_002213815.1;Name=WP_002213815.1;Ontology_term=GO:0005506,GO:0016705,GO:0051537;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310538.1;locus_tag=YPIP275_RS09470;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_002213815.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 37968 39614 . - . ID=gene-YPIP275_RS09475;Name=YPIP275_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09475;old_locus_tag=YPIP275_0852 NZ_AAOS02000009.1 Protein Homology CDS 37968 39614 . - 0 ID=cds-WP_002210215.1;Parent=gene-YPIP275_RS09475;Dbxref=GenBank:WP_002210215.1;Name=WP_002210215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683589.1;locus_tag=YPIP275_RS09475;product=BCCT family transporter;protein_id=WP_002210215.1;transl_table=11 NZ_AAOS02000009.1 RefSeq pseudogene 40029 40097 . - . ID=gene-YPIP275_RS28590;Name=YPIP275_RS28590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28590;partial=true;pseudo=true;start_range=.,40029 NZ_AAOS02000009.1 Protein Homology CDS 40029 40097 . - 0 ID=cds-YPIP275_RS28590;Parent=gene-YPIP275_RS28590;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=YPIP275_RS28590;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;start_range=.,40029;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 40231 41316 . - . ID=gene-YPIP275_RS09485;Name=YPIP275_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09485;old_locus_tag=YPIP275_0855 NZ_AAOS02000009.1 Protein Homology CDS 40231 41316 . - 0 ID=cds-WP_002210218.1;Parent=gene-YPIP275_RS09485;Dbxref=GenBank:WP_002210218.1;Name=WP_002210218.1;Ontology_term=GO:0046395,GO:0009027,GO:0051287;gbkey=CDS;go_function=tartrate dehydrogenase activity|0009027||IEA,NAD binding|0051287||IEA;go_process=carboxylic acid catabolic process|0046395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210218.1;locus_tag=YPIP275_RS09485;product=tartrate dehydrogenase;protein_id=WP_002210218.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 41419 42360 . + . ID=gene-YPIP275_RS09490;Name=YPIP275_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09490;old_locus_tag=YPIP275_0856 NZ_AAOS02000009.1 Protein Homology CDS 41419 42360 . + 0 ID=cds-WP_002210219.1;Parent=gene-YPIP275_RS09490;Dbxref=GenBank:WP_002210219.1;Name=WP_002210219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210219.1;locus_tag=YPIP275_RS09490;product=LysR substrate-binding domain-containing protein;protein_id=WP_002210219.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 42607 43611 . + . ID=gene-YPIP275_RS09495;Name=YPIP275_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09495;old_locus_tag=YPIP275_0857 NZ_AAOS02000009.1 Protein Homology CDS 42607 43611 . + 0 ID=cds-WP_002210220.1;Parent=gene-YPIP275_RS09495;Dbxref=GenBank:WP_002210220.1;Name=WP_002210220.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210220.1;locus_tag=YPIP275_RS09495;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002210220.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 43744 44736 . - . ID=gene-YPIP275_RS09500;Name=YPIP275_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09500;old_locus_tag=YPIP275_0858 NZ_AAOS02000009.1 Protein Homology CDS 43744 44736 . - 0 ID=cds-WP_002210221.1;Parent=gene-YPIP275_RS09500;Dbxref=GenBank:WP_002210221.1;Name=WP_002210221.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583098.1;locus_tag=YPIP275_RS09500;product=ABC transporter permease;protein_id=WP_002210221.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 44733 46223 . - . ID=gene-YPIP275_RS09505;Name=YPIP275_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09505;old_locus_tag=YPIP275_0859 NZ_AAOS02000009.1 Protein Homology CDS 44733 46223 . - 0 ID=cds-WP_002210222.1;Parent=gene-YPIP275_RS09505;Dbxref=GenBank:WP_002210222.1;Name=WP_002210222.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192642.1;locus_tag=YPIP275_RS09505;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002210222.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 46263 47180 . - . ID=gene-YPIP275_RS09510;Name=YPIP275_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09510;old_locus_tag=YPIP275_0860 NZ_AAOS02000009.1 Protein Homology CDS 46263 47180 . - 0 ID=cds-WP_002210223.1;Parent=gene-YPIP275_RS09510;Dbxref=GenBank:WP_002210223.1;Name=WP_002210223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192643.1;locus_tag=YPIP275_RS09510;product=substrate-binding domain-containing protein;protein_id=WP_002210223.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 47355 48422 . - . ID=gene-YPIP275_RS09515;Name=YPIP275_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09515;old_locus_tag=YPIP275_0861 NZ_AAOS02000009.1 Protein Homology CDS 47355 48422 . - 0 ID=cds-WP_002210224.1;Parent=gene-YPIP275_RS09515;Dbxref=GenBank:WP_002210224.1;Name=WP_002210224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004955566.1;locus_tag=YPIP275_RS09515;product=erythritol/L-threitol dehydrogenase;protein_id=WP_002210224.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 49164 49832 . - . ID=gene-YPIP275_RS09520;Name=YPIP275_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09520;old_locus_tag=YPIP275_0862 NZ_AAOS02000009.1 Protein Homology CDS 49164 49832 . - 0 ID=cds-WP_002210225.1;Parent=gene-YPIP275_RS09520;Dbxref=GenBank:WP_002210225.1;Name=WP_002210225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229492.1;locus_tag=YPIP275_RS09520;product=NleF caspase inhibitor;protein_id=WP_002210225.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 50028 50570 . - . ID=gene-YPIP275_RS09525;Name=YPIP275_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09525;old_locus_tag=YPIP275_0864 NZ_AAOS02000009.1 Protein Homology CDS 50028 50570 . - 0 ID=cds-WP_002210227.1;Parent=gene-YPIP275_RS09525;Dbxref=GenBank:WP_002210227.1;Name=WP_002210227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210227.1;locus_tag=YPIP275_RS09525;product=NleF caspase inhibitor;protein_id=WP_002210227.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 50808 51746 . - . ID=gene-YPIP275_RS09530;Name=YPIP275_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09530;old_locus_tag=YPIP275_0865 NZ_AAOS02000009.1 Protein Homology CDS 50808 51746 . - 0 ID=cds-WP_002210228.1;Parent=gene-YPIP275_RS09530;Dbxref=GenBank:WP_002210228.1;Name=WP_002210228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413799.1;locus_tag=YPIP275_RS09530;product=cation diffusion facilitator family transporter;protein_id=WP_002210228.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 52062 52586 . - . ID=gene-YPIP275_RS09535;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=YPIP275_RS09535;old_locus_tag=YPIP275_0866 NZ_AAOS02000009.1 Protein Homology CDS 52062 52586 . - 0 ID=cds-WP_002210229.1;Parent=gene-YPIP275_RS09535;Dbxref=GenBank:WP_002210229.1;Name=WP_002210229.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210229.1;locus_tag=YPIP275_RS09535;product=outer membrane protein OmpX;protein_id=WP_002210229.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 52991 53878 . + . ID=gene-YPIP275_RS09540;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=YPIP275_RS09540;old_locus_tag=YPIP275_0867 NZ_AAOS02000009.1 Protein Homology CDS 52991 53878 . + 0 ID=cds-WP_002213809.1;Parent=gene-YPIP275_RS09540;Dbxref=GenBank:WP_002213809.1;Name=WP_002213809.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303946.1;locus_tag=YPIP275_RS09540;product=threonine/homoserine exporter RhtA;protein_id=WP_002213809.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 53894 54391 . + . ID=gene-YPIP275_RS09545;Name=YPIP275_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09545;old_locus_tag=YPIP275_0868 NZ_AAOS02000009.1 Protein Homology CDS 53894 54391 . + 0 ID=cds-WP_002210231.1;Parent=gene-YPIP275_RS09545;Dbxref=GenBank:WP_002210231.1;Name=WP_002210231.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210231.1;locus_tag=YPIP275_RS09545;product=GNAT family N-acetyltransferase;protein_id=WP_002210231.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 54414 55190 . + . ID=gene-YPIP275_RS09550;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=YPIP275_RS09550;old_locus_tag=YPIP275_0869 NZ_AAOS02000009.1 Protein Homology CDS 54414 55190 . + 0 ID=cds-WP_002210232.1;Parent=gene-YPIP275_RS09550;Dbxref=GenBank:WP_002210232.1;Name=WP_002210232.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104924.1;locus_tag=YPIP275_RS09550;product=trans-aconitate 2-methyltransferase;protein_id=WP_002210232.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 55447 55950 . + . ID=gene-YPIP275_RS09555;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=YPIP275_RS09555;old_locus_tag=YPIP275_0870 NZ_AAOS02000009.1 Protein Homology CDS 55447 55950 . + 0 ID=cds-WP_002210233.1;Parent=gene-YPIP275_RS09555;Dbxref=GenBank:WP_002210233.1;Name=WP_002210233.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005187524.1;locus_tag=YPIP275_RS09555;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_002210233.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 56270 57397 . + . ID=gene-YPIP275_RS09560;Name=YPIP275_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09560;old_locus_tag=YPIP275_0871 NZ_AAOS02000009.1 Protein Homology CDS 56270 57397 . + 0 ID=cds-WP_002210234.1;Parent=gene-YPIP275_RS09560;Dbxref=GenBank:WP_002210234.1;Name=WP_002210234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229928.1;locus_tag=YPIP275_RS09560;product=YdcF family protein;protein_id=WP_002210234.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 57967 58710 . + . ID=gene-YPIP275_RS09565;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=YPIP275_RS09565;old_locus_tag=YPIP275_0872 NZ_AAOS02000009.1 Protein Homology CDS 57967 58710 . + 0 ID=cds-WP_002210235.1;Parent=gene-YPIP275_RS09565;Dbxref=GenBank:WP_002210235.1;Name=WP_002210235.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=YPIP275_RS09565;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_002210235.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 58745 59401 . + . ID=gene-YPIP275_RS09570;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=YPIP275_RS09570;old_locus_tag=YPIP275_0873 NZ_AAOS02000009.1 Protein Homology CDS 58745 59401 . + 0 ID=cds-WP_002210236.1;Parent=gene-YPIP275_RS09570;Dbxref=GenBank:WP_002210236.1;Name=WP_002210236.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=YPIP275_RS09570;product=glutamine ABC transporter permease GlnP;protein_id=WP_002210236.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 59398 60120 . + . ID=gene-YPIP275_RS09575;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS09575;old_locus_tag=YPIP275_0874 NZ_AAOS02000009.1 Protein Homology CDS 59398 60120 . + 0 ID=cds-WP_002210237.1;Parent=gene-YPIP275_RS09575;Dbxref=GenBank:WP_002210237.1;Name=WP_002210237.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=YPIP275_RS09575;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_002210237.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 60360 61658 . - . ID=gene-YPIP275_RS09580;Name=YPIP275_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09580;old_locus_tag=YPIP275_0875 NZ_AAOS02000009.1 Protein Homology CDS 60360 61658 . - 0 ID=cds-WP_002210238.1;Parent=gene-YPIP275_RS09580;Dbxref=GenBank:WP_002210238.1;Name=WP_002210238.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020,GO:0098561;gbkey=CDS;go_component=membrane|0016020||IEA,methyl accepting chemotaxis protein complex|0098561||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210238.1;locus_tag=YPIP275_RS09580;product=methyl-accepting chemotaxis protein;protein_id=WP_002210238.1;transl_table=11 NZ_AAOS02000009.1 RefSeq pseudogene 61717 62737 . + . ID=gene-YPIP275_RS09585;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=YPIP275_RS09585;old_locus_tag=YPIP275_0876;pseudo=true NZ_AAOS02000009.1 Protein Homology CDS 61717 62737 . + 0 ID=cds-YPIP275_RS09585;Parent=gene-YPIP275_RS09585;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS09585;product=IS21-like element IS100 family transposase;pseudo=true;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 62734 63516 . + . ID=gene-YPIP275_RS09590;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS09590;old_locus_tag=YPIP275_0877 NZ_AAOS02000009.1 Protein Homology CDS 62734 63516 . + 0 ID=cds-WP_001317493.1-33;Parent=gene-YPIP275_RS09590;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS09590;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 63789 63908 . + . ID=gene-YPIP275_RS27220;Name=YPIP275_RS27220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27220 NZ_AAOS02000009.1 Protein Homology CDS 63789 63908 . + 0 ID=cds-WP_002264692.1;Parent=gene-YPIP275_RS27220;Dbxref=GenBank:WP_002264692.1;Name=WP_002264692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264692.1;locus_tag=YPIP275_RS27220;product=hypothetical protein;protein_id=WP_002264692.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 64065 64331 . - . ID=gene-YPIP275_RS27225;Name=YPIP275_RS27225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27225 NZ_AAOS02000009.1 Protein Homology CDS 64065 64331 . - 0 ID=cds-WP_002213804.1;Parent=gene-YPIP275_RS27225;Dbxref=GenBank:WP_002213804.1;Name=WP_002213804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192651.1;locus_tag=YPIP275_RS27225;product=hypothetical protein;protein_id=WP_002213804.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 64378 65343 . - . ID=gene-YPIP275_RS09595;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=YPIP275_RS09595;old_locus_tag=YPIP275_0878 NZ_AAOS02000009.1 Protein Homology CDS 64378 65343 . - 0 ID=cds-WP_002386375.1;Parent=gene-YPIP275_RS09595;Dbxref=GenBank:WP_002386375.1;Name=WP_002386375.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303944.1;locus_tag=YPIP275_RS09595;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_002386375.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 65676 65936 . + . ID=gene-YPIP275_RS09600;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=YPIP275_RS09600;old_locus_tag=YPIP275_0880 NZ_AAOS02000009.1 Protein Homology CDS 65676 65936 . + 0 ID=cds-WP_002210240.1;Parent=gene-YPIP275_RS09600;Dbxref=GenBank:WP_002210240.1;Name=WP_002210240.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210240.1;locus_tag=YPIP275_RS09600;product=multiple stress resistance protein BhsA;protein_id=WP_002210240.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 66318 67277 . - . ID=gene-YPIP275_RS09605;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=YPIP275_RS09605;old_locus_tag=YPIP275_0881 NZ_AAOS02000009.1 Protein Homology CDS 66318 67277 . - 0 ID=cds-WP_002210242.1;Parent=gene-YPIP275_RS09605;Dbxref=GenBank:WP_002210242.1;Name=WP_002210242.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413801.1;locus_tag=YPIP275_RS09605;product=DNA-binding protein YbiB;protein_id=WP_002210242.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 67343 68758 . - . ID=gene-YPIP275_RS09610;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=YPIP275_RS09610;old_locus_tag=YPIP275_0882 NZ_AAOS02000009.1 Protein Homology CDS 67343 68758 . - 0 ID=cds-WP_002210243.1;Parent=gene-YPIP275_RS09610;Dbxref=GenBank:WP_002210243.1;Name=WP_002210243.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016598113.1;locus_tag=YPIP275_RS09610;product=o-succinylbenzoate--CoA ligase;protein_id=WP_002210243.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 68746 69717 . - . ID=gene-YPIP275_RS09615;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=YPIP275_RS09615;old_locus_tag=YPIP275_0883 NZ_AAOS02000009.1 Protein Homology CDS 68746 69717 . - 0 ID=cds-WP_002210244.1;Parent=gene-YPIP275_RS09615;Dbxref=GenBank:WP_002210244.1;Name=WP_002210244.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210244.1;locus_tag=YPIP275_RS09615;product=o-succinylbenzoate synthase;protein_id=WP_002210244.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 69717 70574 . - . ID=gene-YPIP275_RS09620;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=YPIP275_RS09620;old_locus_tag=YPIP275_0884 NZ_AAOS02000009.1 Protein Homology CDS 69717 70574 . - 0 ID=cds-WP_002210245.1;Parent=gene-YPIP275_RS09620;Dbxref=GenBank:WP_002210245.1;Name=WP_002210245.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=YPIP275_RS09620;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_002210245.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 70588 71406 . - . ID=gene-YPIP275_RS09625;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=YPIP275_RS09625;old_locus_tag=YPIP275_0885 NZ_AAOS02000009.1 Protein Homology CDS 70588 71406 . - 0 ID=cds-WP_002210246.1;Parent=gene-YPIP275_RS09625;Dbxref=GenBank:WP_002210246.1;Name=WP_002210246.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413804.1;locus_tag=YPIP275_RS09625;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_002210246.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 71403 73106 . - . ID=gene-YPIP275_RS09630;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=YPIP275_RS09630;old_locus_tag=YPIP275_0886 NZ_AAOS02000009.1 Protein Homology CDS 71403 73106 . - 0 ID=cds-WP_002210247.1;Parent=gene-YPIP275_RS09630;Dbxref=GenBank:WP_002210247.1;Name=WP_002210247.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413805.1;locus_tag=YPIP275_RS09630;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_002210247.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 73334 74701 . - . ID=gene-YPIP275_RS09635;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=YPIP275_RS09635;old_locus_tag=YPIP275_0887 NZ_AAOS02000009.1 Protein Homology CDS 73334 74701 . - 0 ID=cds-WP_002210248.1;Parent=gene-YPIP275_RS09635;Dbxref=GenBank:WP_002210248.1;Name=WP_002210248.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192657.1;locus_tag=YPIP275_RS09635;product=isochorismate synthase MenF;protein_id=WP_002210248.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 75229 75873 . - . ID=gene-YPIP275_RS09640;Name=YPIP275_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09640;old_locus_tag=YPIP275_0888 NZ_AAOS02000009.1 Protein Homology CDS 75229 75873 . - 0 ID=cds-WP_002210249.1;Parent=gene-YPIP275_RS09640;Dbxref=GenBank:WP_002210249.1;Name=WP_002210249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210249.1;locus_tag=YPIP275_RS09640;product=RhiA family protein;protein_id=WP_002210249.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 76428 76736 . - . ID=gene-YPIP275_RS09645;Name=YPIP275_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09645;old_locus_tag=YPIP275_0890 NZ_AAOS02000009.1 Protein Homology CDS 76428 76736 . - 0 ID=cds-WP_002210251.1;Parent=gene-YPIP275_RS09645;Dbxref=GenBank:WP_002210251.1;Name=WP_002210251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210251.1;locus_tag=YPIP275_RS09645;product=DUF883 family protein;protein_id=WP_002210251.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 77300 77443 . + . ID=gene-YPIP275_RS09650;Name=YPIP275_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09650;old_locus_tag=YPIP275_0892 NZ_AAOS02000009.1 Protein Homology CDS 77300 77443 . + 0 ID=cds-WP_002210253.1;Parent=gene-YPIP275_RS09650;Dbxref=GenBank:WP_002210253.1;Name=WP_002210253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210253.1;locus_tag=YPIP275_RS09650;product=hypothetical protein;protein_id=WP_002210253.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 77662 79533 . - . ID=gene-YPIP275_RS09660;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=YPIP275_RS09660;old_locus_tag=YPIP275_0893 NZ_AAOS02000009.1 Protein Homology CDS 77662 79533 . - 0 ID=cds-WP_002210254.1;Parent=gene-YPIP275_RS09660;Dbxref=GenBank:WP_002210254.1;Name=WP_002210254.1;Ontology_term=GO:0061678,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway|0061678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104912.1;locus_tag=YPIP275_RS09660;product=phosphogluconate dehydratase;protein_id=WP_002210254.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 79543 80058 . - . ID=gene-YPIP275_RS09665;Name=YPIP275_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09665;old_locus_tag=YPIP275_0894 NZ_AAOS02000009.1 Protein Homology CDS 79543 80058 . - 0 ID=cds-WP_002210255.1;Parent=gene-YPIP275_RS09665;Dbxref=GenBank:WP_002210255.1;Name=WP_002210255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303936.1;locus_tag=YPIP275_RS09665;product=heme-degrading domain-containing protein;protein_id=WP_002210255.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 80088 81404 . - . ID=gene-YPIP275_RS09670;Name=YPIP275_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09670;old_locus_tag=YPIP275_0895 NZ_AAOS02000009.1 Protein Homology CDS 80088 81404 . - 0 ID=cds-WP_002215889.1;Parent=gene-YPIP275_RS09670;Dbxref=GenBank:WP_002215889.1;Name=WP_002215889.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229930.1;locus_tag=YPIP275_RS09670;product=MFS transporter;protein_id=WP_002215889.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 81950 82900 . - . ID=gene-YPIP275_RS09675;Name=YPIP275_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09675;old_locus_tag=YPIP275_0896 NZ_AAOS02000009.1 Protein Homology CDS 81950 82900 . - 0 ID=cds-WP_002210257.1;Parent=gene-YPIP275_RS09675;Dbxref=GenBank:WP_002210257.1;Name=WP_002210257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210257.1;locus_tag=YPIP275_RS09675;product=2-hydroxyacid dehydrogenase;protein_id=WP_002210257.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 83366 84358 . - . ID=gene-YPIP275_RS09685;Name=YPIP275_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09685;old_locus_tag=YPIP275_0899 NZ_AAOS02000009.1 Protein Homology CDS 83366 84358 . - 0 ID=cds-WP_002210260.1;Parent=gene-YPIP275_RS09685;Dbxref=GenBank:WP_002210260.1;Name=WP_002210260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210260.1;locus_tag=YPIP275_RS09685;product=substrate-binding domain-containing protein;protein_id=WP_002210260.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 84827 86110 . + . ID=gene-YPIP275_RS09690;Name=YPIP275_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09690;old_locus_tag=YPIP275_0901 NZ_AAOS02000009.1 Protein Homology CDS 84827 86110 . + 0 ID=cds-WP_002210262.1;Parent=gene-YPIP275_RS09690;Dbxref=GenBank:WP_002210262.1;Name=WP_002210262.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104908.1;locus_tag=YPIP275_RS09690;product=glycoside hydrolase family 10-like protein;protein_id=WP_002210262.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 86869 87633 . + . ID=gene-YPIP275_RS09695;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=YPIP275_RS09695;old_locus_tag=YPIP275_0903 NZ_AAOS02000009.1 Protein Homology CDS 86869 87633 . + 0 ID=cds-WP_002210264.1;Parent=gene-YPIP275_RS09695;Dbxref=GenBank:WP_002210264.1;Name=WP_002210264.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418687.1;locus_tag=YPIP275_RS09695;product=gluconate 5-dehydrogenase;protein_id=WP_002210264.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 87682 88218 . + . ID=gene-YPIP275_RS09700;Name=YPIP275_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09700;old_locus_tag=YPIP275_0904 NZ_AAOS02000009.1 Protein Homology CDS 87682 88218 . + 0 ID=cds-WP_002210265.1;Parent=gene-YPIP275_RS09700;Dbxref=GenBank:WP_002210265.1;Name=WP_002210265.1;Ontology_term=GO:0046177,GO:0005524,GO:0046316;gbkey=CDS;go_function=ATP binding|0005524||IEA,gluconokinase activity|0046316||IEA;go_process=obsolete D-gluconate catabolic process|0046177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210265.1;locus_tag=YPIP275_RS09700;product=gluconokinase;protein_id=WP_002210265.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 88296 88763 . + . ID=gene-YPIP275_RS09705;Name=YPIP275_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09705;old_locus_tag=YPIP275_0905 NZ_AAOS02000009.1 Protein Homology CDS 88296 88763 . + 0 ID=cds-WP_002210266.1;Parent=gene-YPIP275_RS09705;Dbxref=GenBank:WP_002210266.1;Name=WP_002210266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082026.1;locus_tag=YPIP275_RS09705;product=NanQ anomerase/TabA/YiaL family protein;protein_id=WP_002210266.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 89101 90291 . - . ID=gene-YPIP275_RS09710;Name=YPIP275_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09710;old_locus_tag=YPIP275_0906 NZ_AAOS02000009.1 Protein Homology CDS 89101 90291 . - 0 ID=cds-WP_002210267.1;Parent=gene-YPIP275_RS09710;Dbxref=GenBank:WP_002210267.1;Name=WP_002210267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210267.1;locus_tag=YPIP275_RS09710;product=hypothetical protein;protein_id=WP_002210267.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 90527 91990 . - . ID=gene-YPIP275_RS09715;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=YPIP275_RS09715;old_locus_tag=YPIP275_0907 NZ_AAOS02000009.1 Protein Homology CDS 90527 91990 . - 0 ID=cds-WP_002210268.1;Parent=gene-YPIP275_RS09715;Dbxref=GenBank:WP_002210268.1;Name=WP_002210268.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815945.1;locus_tag=YPIP275_RS09715;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_002210268.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 91997 93529 . - . ID=gene-YPIP275_RS09720;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=YPIP275_RS09720;old_locus_tag=YPIP275_0908 NZ_AAOS02000009.1 Protein Homology CDS 91997 93529 . - 0 ID=cds-WP_002210269.1;Parent=gene-YPIP275_RS09720;Dbxref=GenBank:WP_002210269.1;Name=WP_002210269.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228034.1;locus_tag=YPIP275_RS09720;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_002210269.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 93569 95413 . - . ID=gene-YPIP275_RS09725;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=YPIP275_RS09725;old_locus_tag=YPIP275_0909 NZ_AAOS02000009.1 Protein Homology CDS 93569 95413 . - 0 ID=cds-WP_002210270.1;Parent=gene-YPIP275_RS09725;Dbxref=GenBank:WP_002210270.1;Name=WP_002210270.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210270.1;locus_tag=YPIP275_RS09725;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_002210270.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 95410 95712 . - . ID=gene-YPIP275_RS09730;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=YPIP275_RS09730;old_locus_tag=YPIP275_0910 NZ_AAOS02000009.1 Protein Homology CDS 95410 95712 . - 0 ID=cds-WP_002210271.1;Parent=gene-YPIP275_RS09730;Dbxref=GenBank:WP_002210271.1;Name=WP_002210271.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=YPIP275_RS09730;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_002210271.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 95709 96254 . - . ID=gene-YPIP275_RS09735;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS09735;old_locus_tag=YPIP275_0911 NZ_AAOS02000009.1 Protein Homology CDS 95709 96254 . - 0 ID=cds-WP_002210272.1;Parent=gene-YPIP275_RS09735;Dbxref=GenBank:WP_002210272.1;Name=WP_002210272.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650177.1;locus_tag=YPIP275_RS09735;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_002210272.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 96267 96809 . - . ID=gene-YPIP275_RS09740;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=YPIP275_RS09740;old_locus_tag=YPIP275_0912 NZ_AAOS02000009.1 Protein Homology CDS 96267 96809 . - 0 ID=cds-WP_002210273.1;Parent=gene-YPIP275_RS09740;Dbxref=GenBank:WP_002210273.1;Name=WP_002210273.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=YPIP275_RS09740;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_002210273.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 96824 97801 . - . ID=gene-YPIP275_RS09745;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=YPIP275_RS09745;old_locus_tag=YPIP275_0913 NZ_AAOS02000009.1 Protein Homology CDS 96824 97801 . - 0 ID=cds-WP_002210274.1;Parent=gene-YPIP275_RS09745;Dbxref=GenBank:WP_002210274.1;Name=WP_002210274.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=YPIP275_RS09745;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_002210274.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 97798 100542 . - . ID=gene-YPIP275_RS09750;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=YPIP275_RS09750;old_locus_tag=YPIP275_0914 NZ_AAOS02000009.1 Protein Homology CDS 97798 100542 . - 0 ID=cds-WP_002210275.1;Parent=gene-YPIP275_RS09750;Dbxref=GenBank:WP_002210275.1;Name=WP_002210275.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192668.1;locus_tag=YPIP275_RS09750;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_002210275.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 100629 102014 . - . ID=gene-YPIP275_RS09755;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=YPIP275_RS09755;old_locus_tag=YPIP275_0915 NZ_AAOS02000009.1 Protein Homology CDS 100629 102014 . - 0 ID=cds-WP_002210276.1;Parent=gene-YPIP275_RS09755;Dbxref=GenBank:WP_002210276.1;Name=WP_002210276.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210276.1;locus_tag=YPIP275_RS09755;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_002210276.1;transl_table=11 NZ_AAOS02000009.1 RefSeq pseudogene 102011 102510 . - . ID=gene-YPIP275_RS09760;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=pseudogene;locus_tag=YPIP275_RS09760;old_locus_tag=YPIP275_0916;pseudo=true NZ_AAOS02000009.1 Protein Homology CDS 102011 102510 . - 0 ID=cds-YPIP275_RS09760;Parent=gene-YPIP275_RS09760;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228042.1;locus_tag=YPIP275_RS09760;product=NADH-quinone oxidoreductase subunit NuoE;pseudo=true;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 102577 104373 . - . ID=gene-YPIP275_RS09765;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=YPIP275_RS09765;old_locus_tag=YPIP275_0917 NZ_AAOS02000009.1 Protein Homology CDS 102577 104373 . - 0 ID=cds-WP_002210277.1;Parent=gene-YPIP275_RS09765;Dbxref=GenBank:WP_002210277.1;Name=WP_002210277.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159214.1;locus_tag=YPIP275_RS09765;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_002210277.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 104514 105191 . - . ID=gene-YPIP275_RS09770;Name=YPIP275_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09770;old_locus_tag=YPIP275_0918 NZ_AAOS02000009.1 Protein Homology CDS 104514 105191 . - 0 ID=cds-WP_002210278.1;Parent=gene-YPIP275_RS09770;Dbxref=GenBank:WP_002210278.1;Name=WP_002210278.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0051539,GO:0005886,GO:0045271;gbkey=CDS;go_component=plasma membrane|0005886||IEA,respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=YPIP275_RS09770;product=NuoB/complex I 20 kDa subunit family protein;protein_id=WP_002210278.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 105293 105793 . - . ID=gene-YPIP275_RS09775;Name=YPIP275_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09775;old_locus_tag=YPIP275_0919 NZ_AAOS02000009.1 Protein Homology CDS 105293 105793 . - 0 ID=cds-WP_002210279.1;Parent=gene-YPIP275_RS09775;Dbxref=GenBank:WP_002210279.1;Name=WP_002210279.1;Ontology_term=GO:0016655,GO:0048038,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413807.1;locus_tag=YPIP275_RS09775;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_002210279.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 106471 107403 . - . ID=gene-YPIP275_RS09780;Name=rovM;gbkey=Gene;gene=rovM;gene_biotype=protein_coding;locus_tag=YPIP275_RS09780;old_locus_tag=YPIP275_0920 NZ_AAOS02000009.1 Protein Homology CDS 106471 107403 . - 0 ID=cds-WP_002210280.1;Parent=gene-YPIP275_RS09780;Dbxref=GenBank:WP_002210280.1;Name=WP_002210280.1;gbkey=CDS;gene=rovM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222459.1;locus_tag=YPIP275_RS09780;product=virulence transcriptional regulator RovM;protein_id=WP_002210280.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 108259 109473 . + . ID=gene-YPIP275_RS09790;Name=YPIP275_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09790;old_locus_tag=YPIP275_0922 NZ_AAOS02000009.1 Protein Homology CDS 108259 109473 . + 0 ID=cds-WP_002210282.1;Parent=gene-YPIP275_RS09790;Dbxref=GenBank:WP_002210282.1;Name=WP_002210282.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365445.1;locus_tag=YPIP275_RS09790;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_002210282.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 109624 110217 . + . ID=gene-YPIP275_RS09795;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=YPIP275_RS09795;old_locus_tag=YPIP275_0923 NZ_AAOS02000009.1 Protein Homology CDS 109624 110217 . + 0 ID=cds-WP_002210283.1;Parent=gene-YPIP275_RS09795;Dbxref=GenBank:WP_002210283.1;Name=WP_002210283.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650180.1;locus_tag=YPIP275_RS09795;product=5'-deoxynucleotidase;protein_id=WP_002210283.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 110264 110455 . - . ID=gene-YPIP275_RS09800;Name=YPIP275_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09800 NZ_AAOS02000009.1 Protein Homology CDS 110264 110455 . - 0 ID=cds-WP_002216053.1;Parent=gene-YPIP275_RS09800;Dbxref=GenBank:WP_002216053.1;Name=WP_002216053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216053.1;locus_tag=YPIP275_RS09800;product=hypothetical protein;protein_id=WP_002216053.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 110560 112392 . - . ID=gene-YPIP275_RS09805;Name=YPIP275_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09805;old_locus_tag=YPIP275_0924 NZ_AAOS02000009.1 Protein Homology CDS 110560 112392 . - 0 ID=cds-WP_002227880.1;Parent=gene-YPIP275_RS09805;Dbxref=GenBank:WP_002227880.1;Name=WP_002227880.1;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276412.1;locus_tag=YPIP275_RS09805;product=SLC13 family permease;protein_id=WP_002227880.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 112684 113340 . - . ID=gene-YPIP275_RS09810;Name=YPIP275_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09810;old_locus_tag=YPIP275_0925 NZ_AAOS02000009.1 Protein Homology CDS 112684 113340 . - 0 ID=cds-WP_002210285.1;Parent=gene-YPIP275_RS09810;Dbxref=GenBank:WP_002210285.1;Name=WP_002210285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104894.1;locus_tag=YPIP275_RS09810;product=sugar phosphatase;protein_id=WP_002210285.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 113505 113999 . - . ID=gene-YPIP275_RS09815;Name=YPIP275_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09815;old_locus_tag=YPIP275_0926 NZ_AAOS02000009.1 Protein Homology CDS 113505 113999 . - 0 ID=cds-WP_002210286.1;Parent=gene-YPIP275_RS09815;Dbxref=GenBank:WP_002210286.1;Name=WP_002210286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461277.1;locus_tag=YPIP275_RS09815;product=YfbU family protein;protein_id=WP_002210286.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 114307 114762 . - . ID=gene-YPIP275_RS09820;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=YPIP275_RS09820;old_locus_tag=YPIP275_0927 NZ_AAOS02000009.1 Protein Homology CDS 114307 114762 . - 0 ID=cds-WP_002210287.1;Parent=gene-YPIP275_RS09820;Dbxref=GenBank:WP_002210287.1;Name=WP_002210287.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146029.1;locus_tag=YPIP275_RS09820;product=terminus macrodomain insulation protein YfbV;protein_id=WP_002210287.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 115184 116386 . + . ID=gene-YPIP275_RS09830;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=YPIP275_RS09830;old_locus_tag=YPIP275_0928 NZ_AAOS02000009.1 Protein Homology CDS 115184 116386 . + 0 ID=cds-WP_002210288.1;Parent=gene-YPIP275_RS09830;Dbxref=GenBank:WP_002210288.1;Name=WP_002210288.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=YPIP275_RS09830;product=acetate kinase;protein_id=WP_002210288.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 116569 118707 . + . ID=gene-YPIP275_RS09835;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=YPIP275_RS09835;old_locus_tag=YPIP275_0930 NZ_AAOS02000009.1 Protein Homology CDS 116569 118707 . + 0 ID=cds-WP_002265141.1;Parent=gene-YPIP275_RS09835;Dbxref=GenBank:WP_002265141.1;Name=WP_002265141.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002265141.1;locus_tag=YPIP275_RS09835;product=phosphate acetyltransferase;protein_id=WP_002265141.1;transl_table=11 NZ_AAOS02000009.1 RefSeq pseudogene 118723 118791 . - . ID=gene-YPIP275_RS28600;Name=YPIP275_RS28600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28600;partial=true;pseudo=true;start_range=.,118723 NZ_AAOS02000009.1 Protein Homology CDS 118723 118791 . - 0 ID=cds-YPIP275_RS28600;Parent=gene-YPIP275_RS28600;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=YPIP275_RS28600;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;start_range=.,118723;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 118973 120007 . - . ID=gene-YPIP275_RS09840;Name=YPIP275_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09840;old_locus_tag=YPIP275_0931 NZ_AAOS02000009.1 Protein Homology CDS 118973 120007 . - 0 ID=cds-WP_002216059.1;Parent=gene-YPIP275_RS09840;Dbxref=GenBank:WP_002216059.1;Name=WP_002216059.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192679.1;locus_tag=YPIP275_RS09840;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002216059.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 120374 120817 . + . ID=gene-YPIP275_RS09845;Name=YPIP275_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09845;old_locus_tag=YPIP275_0932 NZ_AAOS02000009.1 Protein Homology CDS 120374 120817 . + 0 ID=cds-WP_002210291.1;Parent=gene-YPIP275_RS09845;Dbxref=GenBank:WP_002210291.1;Name=WP_002210291.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192680.1;locus_tag=YPIP275_RS09845;product=PTS sugar transporter subunit IIA;protein_id=WP_002210291.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 120986 121240 . + . ID=gene-YPIP275_RS09850;Name=YPIP275_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09850;old_locus_tag=YPIP275_0934 NZ_AAOS02000009.1 Protein Homology CDS 120986 121240 . + 0 ID=cds-WP_002210293.1;Parent=gene-YPIP275_RS09850;Dbxref=GenBank:WP_002210293.1;Name=WP_002210293.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210293.1;locus_tag=YPIP275_RS09850;product=PTS sugar transporter subunit IIB;protein_id=WP_002210293.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 121262 122470 . - . ID=gene-YPIP275_RS09855;Name=YPIP275_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09855;old_locus_tag=YPIP275_0935 NZ_AAOS02000009.1 Protein Homology CDS 121262 122470 . - 0 ID=cds-WP_002209743.1-19;Parent=gene-YPIP275_RS09855;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS09855;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 122504 123382 . - . ID=gene-YPIP275_RS09860;Name=YPIP275_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09860;old_locus_tag=YPIP275_0936 NZ_AAOS02000009.1 Protein Homology CDS 122504 123382 . - 0 ID=cds-WP_002214717.1;Parent=gene-YPIP275_RS09860;Dbxref=GenBank:WP_002214717.1;Name=WP_002214717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002370193.1;locus_tag=YPIP275_RS09860;product=transglycosylase domain-containing protein;protein_id=WP_002214717.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 123439 129417 . - . ID=gene-YPIP275_RS09865;Name=YPIP275_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09865;old_locus_tag=YPIP275_0937 NZ_AAOS02000009.1 Protein Homology CDS 123439 129417 . - 0 ID=cds-WP_002210294.1;Parent=gene-YPIP275_RS09865;Dbxref=GenBank:WP_002210294.1;Name=WP_002210294.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016582332.1;locus_tag=YPIP275_RS09865;product=alpha-2-macroglobulin family protein;protein_id=WP_002210294.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 129824 130372 . - . ID=gene-YPIP275_RS09870;Name=YPIP275_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09870 NZ_AAOS02000009.1 Protein Homology CDS 129824 130372 . - 0 ID=cds-WP_002214718.1;Parent=gene-YPIP275_RS09870;Dbxref=GenBank:WP_002214718.1;Name=WP_002214718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214718.1;locus_tag=YPIP275_RS09870;product=YagU family protein;protein_id=WP_002214718.1;transl_table=11 NZ_AAOS02000009.1 RefSeq direct_repeat 130733 131064 . + . ID=id-NZ_AAOS02000009.1:130733..131064;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=130733..130760;rpt_unit_seq=gttcactgccgcacaggcagcttagaaa NZ_AAOS02000009.1 RefSeq gene 131068 131922 . - . ID=gene-YPIP275_RS09875;Name=YPIP275_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09875;old_locus_tag=YPIP275_0939 NZ_AAOS02000009.1 Protein Homology CDS 131068 131922 . - 0 ID=cds-WP_002210296.1;Parent=gene-YPIP275_RS09875;Dbxref=GenBank:WP_002210296.1;Name=WP_002210296.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304405.1;locus_tag=YPIP275_RS09875;product=MurR/RpiR family transcriptional regulator;protein_id=WP_002210296.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 132228 133754 . + . ID=gene-YPIP275_RS09880;Name=YPIP275_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09880;old_locus_tag=YPIP275_0940 NZ_AAOS02000009.1 Protein Homology CDS 132228 133754 . + 0 ID=cds-WP_002210297.1;Parent=gene-YPIP275_RS09880;Dbxref=GenBank:WP_002210297.1;Name=WP_002210297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210297.1;locus_tag=YPIP275_RS09880;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_002210297.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 133789 135714 . + . ID=gene-YPIP275_RS09885;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=YPIP275_RS09885;old_locus_tag=YPIP275_0941 NZ_AAOS02000009.1 Protein Homology CDS 133789 135714 . + 0 ID=cds-WP_002359655.1;Parent=gene-YPIP275_RS09885;Dbxref=GenBank:WP_002359655.1;Name=WP_002359655.1;Ontology_term=GO:0019310,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=hydrolase activity%2C acting on carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192846.1;locus_tag=YPIP275_RS09885;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_002359655.1;transl_table=11 NZ_AAOS02000009.1 RefSeq pseudogene 136008 136993 . + . ID=gene-YPIP275_RS09890;Name=iolG;gbkey=Gene;gene=iolG;gene_biotype=pseudogene;locus_tag=YPIP275_RS09890;pseudo=true NZ_AAOS02000009.1 Protein Homology CDS 136008 136993 . + 0 ID=cds-YPIP275_RS09890;Parent=gene-YPIP275_RS09890;Note=frameshifted;Ontology_term=GO:0019310,GO:0050112;gbkey=CDS;gene=iolG;go_function=inositol 2-dehydrogenase (NAD+) activity|0050112||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134755.1;locus_tag=YPIP275_RS09890;product=inositol 2-dehydrogenase;pseudo=true;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 137119 138048 . + . ID=gene-YPIP275_RS09895;Name=YPIP275_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09895;old_locus_tag=YPIP275_0945 NZ_AAOS02000009.1 Protein Homology CDS 137119 138048 . + 0 ID=cds-WP_002210300.1;Parent=gene-YPIP275_RS09895;Dbxref=GenBank:WP_002210300.1;Name=WP_002210300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304400.1;locus_tag=YPIP275_RS09895;product=substrate-binding domain-containing protein;protein_id=WP_002210300.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 138097 139644 . + . ID=gene-YPIP275_RS09900;Name=YPIP275_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09900;old_locus_tag=YPIP275_0946 NZ_AAOS02000009.1 Protein Homology CDS 138097 139644 . + 0 ID=cds-WP_002210301.1;Parent=gene-YPIP275_RS09900;Dbxref=GenBank:WP_002210301.1;Name=WP_002210301.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883046.1;locus_tag=YPIP275_RS09900;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002210301.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 139656 140684 . + . ID=gene-YPIP275_RS09905;Name=YPIP275_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09905;old_locus_tag=YPIP275_0947 NZ_AAOS02000009.1 Protein Homology CDS 139656 140684 . + 0 ID=cds-WP_002210302.1;Parent=gene-YPIP275_RS09905;Dbxref=GenBank:WP_002210302.1;Name=WP_002210302.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003826102.1;locus_tag=YPIP275_RS09905;product=ABC transporter permease;protein_id=WP_002210302.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 140708 141841 . + . ID=gene-YPIP275_RS09910;Name=YPIP275_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09910;old_locus_tag=YPIP275_0948 NZ_AAOS02000009.1 Protein Homology CDS 140708 141841 . + 0 ID=cds-WP_002210303.1;Parent=gene-YPIP275_RS09910;Dbxref=GenBank:WP_002210303.1;Name=WP_002210303.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906367.1;locus_tag=YPIP275_RS09910;product=Gfo/Idh/MocA family protein;protein_id=WP_002210303.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 141873 143843 . + . ID=gene-YPIP275_RS09915;Name=YPIP275_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09915;old_locus_tag=YPIP275_0949 NZ_AAOS02000009.1 Protein Homology CDS 141873 143843 . + 0 ID=cds-WP_002210304.1;Parent=gene-YPIP275_RS09915;Dbxref=GenBank:WP_002210304.1;Name=WP_002210304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304398.1;locus_tag=YPIP275_RS09915;product=bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2-deoxyphosphogluconate aldolase;protein_id=WP_002210304.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 143858 144916 . + . ID=gene-YPIP275_RS09920;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=YPIP275_RS09920;old_locus_tag=YPIP275_0950 NZ_AAOS02000009.1 Protein Homology CDS 143858 144916 . + 0 ID=cds-WP_002214721.1;Parent=gene-YPIP275_RS09920;Dbxref=GenBank:WP_002214721.1;Name=WP_002214721.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214721.1;locus_tag=YPIP275_RS09920;product=myo-inosose-2 dehydratase;protein_id=WP_002214721.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 144926 145741 . + . ID=gene-YPIP275_RS09925;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=YPIP275_RS09925;old_locus_tag=YPIP275_0951 NZ_AAOS02000009.1 Protein Homology CDS 144926 145741 . + 0 ID=cds-WP_002210306.1;Parent=gene-YPIP275_RS09925;Dbxref=GenBank:WP_002210306.1;Name=WP_002210306.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191925.1;locus_tag=YPIP275_RS09925;product=5-deoxy-glucuronate isomerase;protein_id=WP_002210306.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 145944 146246 . - . ID=gene-YPIP275_RS27230;Name=YPIP275_RS27230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27230;old_locus_tag=YPIP275_0952 NZ_AAOS02000009.1 Protein Homology CDS 145944 146246 . - 0 ID=cds-WP_002210307.1;Parent=gene-YPIP275_RS27230;Dbxref=GenBank:WP_002210307.1;Name=WP_002210307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191926.1;locus_tag=YPIP275_RS27230;product=hypothetical protein;protein_id=WP_002210307.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 146311 148101 . + . ID=gene-YPIP275_RS09935;Name=YPIP275_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09935;old_locus_tag=YPIP275_0953 NZ_AAOS02000009.1 Protein Homology CDS 146311 148101 . + 0 ID=cds-WP_002214723.1;Parent=gene-YPIP275_RS09935;Dbxref=GenBank:WP_002214723.1;Name=WP_002214723.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105529.1;locus_tag=YPIP275_RS09935;product=ABCB family ABC transporter ATP-binding protein/permease;protein_id=WP_002214723.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 148117 148404 . - . ID=gene-YPIP275_RS09940;Name=YPIP275_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09940;old_locus_tag=YPIP275_0954 NZ_AAOS02000009.1 Protein Homology CDS 148117 148404 . - 0 ID=cds-WP_002210309.1;Parent=gene-YPIP275_RS09940;Dbxref=GenBank:WP_002210309.1;Name=WP_002210309.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210309.1;locus_tag=YPIP275_RS09940;product=putative quinol monooxygenase;protein_id=WP_002210309.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 148847 149041 . + . ID=gene-YPIP275_RS09945;Name=YPIP275_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09945;old_locus_tag=YPIP275_0955 NZ_AAOS02000009.1 Protein Homology CDS 148847 149041 . + 0 ID=cds-WP_002210310.1;Parent=gene-YPIP275_RS09945;Dbxref=GenBank:WP_002210310.1;Name=WP_002210310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105528.1;locus_tag=YPIP275_RS09945;product=glycogen synthase;protein_id=WP_002210310.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 149059 149241 . - . ID=gene-YPIP275_RS09950;Name=YPIP275_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09950;old_locus_tag=YPIP275_0956 NZ_AAOS02000009.1 Protein Homology CDS 149059 149241 . - 0 ID=cds-WP_002210311.1;Parent=gene-YPIP275_RS09950;Dbxref=GenBank:WP_002210311.1;Name=WP_002210311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210311.1;locus_tag=YPIP275_RS09950;product=hypothetical protein;protein_id=WP_002210311.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 149423 150388 . - . ID=gene-YPIP275_RS09955;Name=YPIP275_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09955;old_locus_tag=YPIP275_0957 NZ_AAOS02000009.1 Protein Homology CDS 149423 150388 . - 0 ID=cds-WP_002210312.1;Parent=gene-YPIP275_RS09955;Dbxref=GenBank:WP_002210312.1;Name=WP_002210312.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700834.1;locus_tag=YPIP275_RS09955;product=acyltransferase;protein_id=WP_002210312.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 150838 151428 . + . ID=gene-YPIP275_RS09960;Name=YPIP275_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09960;old_locus_tag=YPIP275_0958 NZ_AAOS02000009.1 Protein Homology CDS 150838 151428 . + 0 ID=cds-WP_002210313.1;Parent=gene-YPIP275_RS09960;Dbxref=GenBank:WP_002210313.1;Name=WP_002210313.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081202.1;locus_tag=YPIP275_RS09960;product=helix-turn-helix transcriptional regulator;protein_id=WP_002210313.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 151748 152179 . - . ID=gene-YPIP275_RS09965;Name=YPIP275_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09965;old_locus_tag=YPIP275_0959 NZ_AAOS02000009.1 Protein Homology CDS 151748 152179 . - 0 ID=cds-WP_050547899.1;Parent=gene-YPIP275_RS09965;Dbxref=GenBank:WP_050547899.1;Name=WP_050547899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214726.1;locus_tag=YPIP275_RS09965;product=cold-shock protein;protein_id=WP_050547899.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 152505 152714 . + . ID=gene-YPIP275_RS09970;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=YPIP275_RS09970;old_locus_tag=YPIP275_0961 NZ_AAOS02000009.1 Protein Homology CDS 152505 152714 . + 0 ID=cds-WP_002210315.1;Parent=gene-YPIP275_RS09970;Dbxref=GenBank:WP_002210315.1;Name=WP_002210315.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225795.1;locus_tag=YPIP275_RS09970;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_002210315.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 153137 153520 . - . ID=gene-YPIP275_RS09975;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=YPIP275_RS09975;old_locus_tag=YPIP275_0963 NZ_AAOS02000009.1 Protein Homology CDS 153137 153520 . - 0 ID=cds-WP_002210317.1;Parent=gene-YPIP275_RS09975;Dbxref=GenBank:WP_002210317.1;Name=WP_002210317.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683984.1;locus_tag=YPIP275_RS09975;product=fluoride efflux transporter CrcB;protein_id=WP_002210317.1;transl_table=11 NZ_AAOS02000009.1 cmsearch riboswitch 153621 153684 . - . ID=id-NZ_AAOS02000009.1:153621..153684;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_AAOS02000009.1 RefSeq gene 154087 154344 . + . ID=gene-YPIP275_RS09985;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=YPIP275_RS09985;old_locus_tag=YPIP275_0965 NZ_AAOS02000009.1 Protein Homology CDS 154087 154344 . + 0 ID=cds-WP_002210319.1;Parent=gene-YPIP275_RS09985;Dbxref=GenBank:WP_002210319.1;Name=WP_002210319.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210319.1;locus_tag=YPIP275_RS09985;product=Sec-independent protein translocase subunit TatA;protein_id=WP_002210319.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 154525 155490 . - . ID=gene-YPIP275_RS09990;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=YPIP275_RS09990;old_locus_tag=YPIP275_0966 NZ_AAOS02000009.1 Protein Homology CDS 154525 155490 . - 0 ID=cds-WP_002210320.1;Parent=gene-YPIP275_RS09990;Dbxref=GenBank:WP_002210320.1;Name=WP_002210320.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=YPIP275_RS09990;product=lipoyl synthase;protein_id=WP_002210320.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 155683 156384 . - . ID=gene-YPIP275_RS09995;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=YPIP275_RS09995;old_locus_tag=YPIP275_0967 NZ_AAOS02000009.1 Protein Homology CDS 155683 156384 . - 0 ID=cds-WP_002218201.1;Parent=gene-YPIP275_RS09995;Dbxref=GenBank:WP_002218201.1;Name=WP_002218201.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304393.1;locus_tag=YPIP275_RS09995;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_002218201.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 156596 156859 . - . ID=gene-YPIP275_RS10000;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=YPIP275_RS10000;old_locus_tag=YPIP275_0968 NZ_AAOS02000009.1 Protein Homology CDS 156596 156859 . - 0 ID=cds-WP_002210322.1;Parent=gene-YPIP275_RS10000;Dbxref=GenBank:WP_002210322.1;Name=WP_002210322.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=YPIP275_RS10000;product=DUF493 family protein YbeD;protein_id=WP_002210322.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 157057 158259 . - . ID=gene-YPIP275_RS10005;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10005;old_locus_tag=YPIP275_0969 NZ_AAOS02000009.1 Protein Homology CDS 157057 158259 . - 0 ID=cds-WP_002210323.1;Parent=gene-YPIP275_RS10005;Dbxref=GenBank:WP_002210323.1;Name=WP_002210323.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210323.1;locus_tag=YPIP275_RS10005;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_002210323.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 158662 159744 . - . ID=gene-YPIP275_RS10010;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10010;old_locus_tag=YPIP275_0970 NZ_AAOS02000009.1 Protein Homology CDS 158662 159744 . - 0 ID=cds-WP_002210324.1;Parent=gene-YPIP275_RS10010;Dbxref=GenBank:WP_002210324.1;Name=WP_002210324.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413541.1;locus_tag=YPIP275_RS10010;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_002210324.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 159754 160866 . - . ID=gene-YPIP275_RS10015;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=YPIP275_RS10015;old_locus_tag=YPIP275_0971 NZ_AAOS02000009.1 Protein Homology CDS 159754 160866 . - 0 ID=cds-WP_002210325.1;Parent=gene-YPIP275_RS10015;Dbxref=GenBank:WP_002210325.1;Name=WP_002210325.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308699.1;locus_tag=YPIP275_RS10015;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_002210325.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 161051 162946 . - . ID=gene-YPIP275_RS10020;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10020;old_locus_tag=YPIP275_0972 NZ_AAOS02000009.1 Protein Homology CDS 161051 162946 . - 0 ID=cds-WP_002210326.1;Parent=gene-YPIP275_RS10020;Dbxref=GenBank:WP_002210326.1;Name=WP_002210326.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683709.1;locus_tag=YPIP275_RS10020;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_002210326.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 163028 163498 . - . ID=gene-YPIP275_RS10025;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=YPIP275_RS10025;old_locus_tag=YPIP275_0974 NZ_AAOS02000009.1 Protein Homology CDS 163028 163498 . - 0 ID=cds-WP_002210328.1;Parent=gene-YPIP275_RS10025;Dbxref=GenBank:WP_002210328.1;Name=WP_002210328.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=YPIP275_RS10025;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_002210328.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 163502 163819 . - . ID=gene-YPIP275_RS10030;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=YPIP275_RS10030;old_locus_tag=YPIP275_0975 NZ_AAOS02000009.1 Protein Homology CDS 163502 163819 . - 0 ID=cds-WP_002210329.1;Parent=gene-YPIP275_RS10030;Dbxref=GenBank:WP_002210329.1;Name=WP_002210329.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=YPIP275_RS10030;product=ribosome silencing factor;protein_id=WP_002210329.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 164043 164705 . - . ID=gene-YPIP275_RS10035;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=YPIP275_RS10035;old_locus_tag=YPIP275_0976 NZ_AAOS02000009.1 Protein Homology CDS 164043 164705 . - 0 ID=cds-WP_002210330.1;Parent=gene-YPIP275_RS10035;Dbxref=GenBank:WP_002210330.1;Name=WP_002210330.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210330.1;locus_tag=YPIP275_RS10035;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_002210330.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 164695 165729 . - . ID=gene-YPIP275_RS10040;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10040;old_locus_tag=YPIP275_0977 NZ_AAOS02000009.1 Protein Homology CDS 164695 165729 . - 0 ID=cds-WP_002210331.1;Parent=gene-YPIP275_RS10040;Dbxref=GenBank:WP_002210331.1;Name=WP_002210331.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210331.1;locus_tag=YPIP275_RS10040;product=DNA polymerase III subunit delta;protein_id=WP_002210331.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 165726 166349 . - . ID=gene-YPIP275_RS10045;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=YPIP275_RS10045;old_locus_tag=YPIP275_0978 NZ_AAOS02000009.1 Protein Homology CDS 165726 166349 . - 0 ID=cds-WP_002210332.1;Parent=gene-YPIP275_RS10045;Dbxref=GenBank:WP_002210332.1;Name=WP_002210332.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081195.1;locus_tag=YPIP275_RS10045;product=LPS assembly lipoprotein LptE;protein_id=WP_002210332.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 166364 168946 . - . ID=gene-YPIP275_RS10050;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=YPIP275_RS10050;old_locus_tag=YPIP275_0979 NZ_AAOS02000009.1 Protein Homology CDS 166364 168946 . - 0 ID=cds-WP_002210333.1;Parent=gene-YPIP275_RS10050;Dbxref=GenBank:WP_002210333.1;Name=WP_002210333.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=YPIP275_RS10050;product=leucine--tRNA ligase;protein_id=WP_002210333.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 169207 169689 . + . ID=gene-YPIP275_RS10055;Name=YPIP275_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10055;old_locus_tag=YPIP275_0981 NZ_AAOS02000009.1 Protein Homology CDS 169207 169689 . + 0 ID=cds-WP_002210335.1;Parent=gene-YPIP275_RS10055;Dbxref=GenBank:WP_002210335.1;Name=WP_002210335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=YPIP275_RS10055;product=zinc ribbon-containing protein;protein_id=WP_002210335.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 169823 170548 . - . ID=gene-YPIP275_RS10060;Name=YPIP275_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10060;old_locus_tag=YPIP275_0982 NZ_AAOS02000009.1 Protein Homology CDS 169823 170548 . - 0 ID=cds-WP_002210336.1;Parent=gene-YPIP275_RS10060;Dbxref=GenBank:WP_002210336.1;Name=WP_002210336.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=YPIP275_RS10060;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002210336.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 170548 171222 . - . ID=gene-YPIP275_RS10065;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=YPIP275_RS10065;old_locus_tag=YPIP275_0983 NZ_AAOS02000009.1 Protein Homology CDS 170548 171222 . - 0 ID=cds-WP_002210337.1;Parent=gene-YPIP275_RS10065;Dbxref=GenBank:WP_002210337.1;Name=WP_002210337.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=YPIP275_RS10065;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_002210337.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 171222 171962 . - . ID=gene-YPIP275_RS10070;Name=YPIP275_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10070;old_locus_tag=YPIP275_0984 NZ_AAOS02000009.1 Protein Homology CDS 171222 171962 . - 0 ID=cds-WP_002210338.1;Parent=gene-YPIP275_RS10070;Dbxref=GenBank:WP_002210338.1;Name=WP_002210338.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015698156.1;locus_tag=YPIP275_RS10070;product=amino acid ABC transporter permease;protein_id=WP_002210338.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 172136 173053 . - . ID=gene-YPIP275_RS10075;Name=YPIP275_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10075;old_locus_tag=YPIP275_0985 NZ_AAOS02000009.1 Protein Homology CDS 172136 173053 . - 0 ID=cds-WP_002210339.1;Parent=gene-YPIP275_RS10075;Dbxref=GenBank:WP_002210339.1;Name=WP_002210339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225821.1;locus_tag=YPIP275_RS10075;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002210339.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 173818 175365 . - . ID=gene-YPIP275_RS10080;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=YPIP275_RS10080;old_locus_tag=YPIP275_0987 NZ_AAOS02000009.1 Protein Homology CDS 173818 175365 . - 0 ID=cds-WP_002210341.1;Parent=gene-YPIP275_RS10080;Dbxref=GenBank:WP_002210341.1;Name=WP_002210341.1;Ontology_term=GO:0042158,GO:0016747,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210341.1;locus_tag=YPIP275_RS10080;product=apolipoprotein N-acyltransferase;protein_id=WP_002210341.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 175373 176251 . - . ID=gene-YPIP275_RS10085;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=YPIP275_RS10085;old_locus_tag=YPIP275_0988 NZ_AAOS02000009.1 Protein Homology CDS 175373 176251 . - 0 ID=cds-WP_002210342.1;Parent=gene-YPIP275_RS10085;Dbxref=GenBank:WP_002210342.1;Name=WP_002210342.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210342.1;locus_tag=YPIP275_RS10085;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_002210342.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 176369 176842 . - . ID=gene-YPIP275_RS10090;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=YPIP275_RS10090;old_locus_tag=YPIP275_0989 NZ_AAOS02000009.1 Protein Homology CDS 176369 176842 . - 0 ID=cds-WP_002210344.1;Parent=gene-YPIP275_RS10090;Dbxref=GenBank:WP_002210344.1;Name=WP_002210344.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210344.1;locus_tag=YPIP275_RS10090;product=rRNA maturation RNase YbeY;protein_id=WP_002210344.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 176839 177912 . - . ID=gene-YPIP275_RS10095;Name=YPIP275_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10095;old_locus_tag=YPIP275_0991 NZ_AAOS02000009.1 Protein Homology CDS 176839 177912 . - 0 ID=cds-WP_002210345.1;Parent=gene-YPIP275_RS10095;Dbxref=GenBank:WP_002210345.1;Name=WP_002210345.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683708.1;locus_tag=YPIP275_RS10095;product=PhoH family protein;protein_id=WP_002210345.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 178239 179663 . - . ID=gene-YPIP275_RS10100;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=YPIP275_RS10100;old_locus_tag=YPIP275_0992 NZ_AAOS02000009.1 Protein Homology CDS 178239 179663 . - 0 ID=cds-WP_002227875.1;Parent=gene-YPIP275_RS10100;Dbxref=GenBank:WP_002227875.1;Name=WP_002227875.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683707.1;locus_tag=YPIP275_RS10100;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_002227875.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 179905 181086 . + . ID=gene-YPIP275_RS10105;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=YPIP275_RS10105;old_locus_tag=YPIP275_0993 NZ_AAOS02000009.1 Protein Homology CDS 179905 181086 . + 0 ID=cds-WP_002210347.1;Parent=gene-YPIP275_RS10105;Dbxref=GenBank:WP_002210347.1;Name=WP_002210347.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279090.1;locus_tag=YPIP275_RS10105;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_002210347.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 181480 181554 . - . ID=gene-YPIP275_RS10110;Name=YPIP275_RS10110;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS10110;old_locus_tag=YPIP275_0994 NZ_AAOS02000009.1 tRNAscan-SE tRNA 181480 181554 . - . ID=rna-YPIP275_RS10110;Parent=gene-YPIP275_RS10110;anticodon=(pos:complement(181520..181522));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS10110;product=tRNA-Gln NZ_AAOS02000009.1 tRNAscan-SE exon 181480 181554 . - . ID=exon-YPIP275_RS10110-1;Parent=rna-YPIP275_RS10110;anticodon=(pos:complement(181520..181522));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS10110;product=tRNA-Gln NZ_AAOS02000009.1 RefSeq gene 181560 181636 . - . ID=gene-YPIP275_RS10115;Name=YPIP275_RS10115;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS10115;old_locus_tag=YPIP275_0995 NZ_AAOS02000009.1 tRNAscan-SE tRNA 181560 181636 . - . ID=rna-YPIP275_RS10115;Parent=gene-YPIP275_RS10115;anticodon=(pos:complement(181600..181602));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS10115;product=tRNA-Met NZ_AAOS02000009.1 tRNAscan-SE exon 181560 181636 . - . ID=exon-YPIP275_RS10115-1;Parent=rna-YPIP275_RS10115;anticodon=(pos:complement(181600..181602));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS10115;product=tRNA-Met NZ_AAOS02000009.1 RefSeq gene 181669 181743 . - . ID=gene-YPIP275_RS10120;Name=YPIP275_RS10120;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS10120;old_locus_tag=YPIP275_0996 NZ_AAOS02000009.1 tRNAscan-SE tRNA 181669 181743 . - . ID=rna-YPIP275_RS10120;Parent=gene-YPIP275_RS10120;anticodon=(pos:complement(181709..181711));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS10120;product=tRNA-Gln NZ_AAOS02000009.1 tRNAscan-SE exon 181669 181743 . - . ID=exon-YPIP275_RS10120-1;Parent=rna-YPIP275_RS10120;anticodon=(pos:complement(181709..181711));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS10120;product=tRNA-Gln NZ_AAOS02000009.1 RefSeq gene 181773 181857 . - . ID=gene-YPIP275_RS10125;Name=YPIP275_RS10125;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS10125;old_locus_tag=YPIP275_0997 NZ_AAOS02000009.1 tRNAscan-SE tRNA 181773 181857 . - . ID=rna-YPIP275_RS10125;Parent=gene-YPIP275_RS10125;anticodon=(pos:complement(181821..181823));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS10125;product=tRNA-Leu NZ_AAOS02000009.1 tRNAscan-SE exon 181773 181857 . - . ID=exon-YPIP275_RS10125-1;Parent=rna-YPIP275_RS10125;anticodon=(pos:complement(181821..181823));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS10125;product=tRNA-Leu NZ_AAOS02000009.1 RefSeq gene 181865 181941 . - . ID=gene-YPIP275_RS10130;Name=YPIP275_RS10130;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS10130;old_locus_tag=YPIP275_0998 NZ_AAOS02000009.1 tRNAscan-SE tRNA 181865 181941 . - . ID=rna-YPIP275_RS10130;Parent=gene-YPIP275_RS10130;anticodon=(pos:complement(181905..181907));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS10130;product=tRNA-Met NZ_AAOS02000009.1 tRNAscan-SE exon 181865 181941 . - . ID=exon-YPIP275_RS10130-1;Parent=rna-YPIP275_RS10130;anticodon=(pos:complement(181905..181907));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS10130;product=tRNA-Met NZ_AAOS02000009.1 RefSeq gene 182399 184063 . - . ID=gene-YPIP275_RS10140;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=YPIP275_RS10140;old_locus_tag=YPIP275_0999 NZ_AAOS02000009.1 Protein Homology CDS 182399 184063 . - 0 ID=cds-WP_002210348.1;Parent=gene-YPIP275_RS10140;Dbxref=GenBank:WP_002210348.1;Name=WP_002210348.1;Ontology_term=GO:0070981,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=YPIP275_RS10140;product=asparagine synthase B;protein_id=WP_002210348.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 184418 185170 . - . ID=gene-YPIP275_RS10145;Name=YPIP275_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS10145;old_locus_tag=YPIP275_1000 NZ_AAOS02000009.1 Protein Homology CDS 184418 185170 . - 0 ID=cds-WP_002210349.1;Parent=gene-YPIP275_RS10145;Dbxref=GenBank:WP_002210349.1;Name=WP_002210349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163352.1;locus_tag=YPIP275_RS10145;product=HAD-IIA family hydrolase;protein_id=WP_002210349.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 185243 186469 . - . ID=gene-YPIP275_RS10150;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=YPIP275_RS10150;old_locus_tag=YPIP275_1001 NZ_AAOS02000009.1 Protein Homology CDS 185243 186469 . - 0 ID=cds-WP_002224863.1;Parent=gene-YPIP275_RS10150;Dbxref=GenBank:WP_002224863.1;Name=WP_002224863.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224863.1;locus_tag=YPIP275_RS10150;product=DNA-binding transcriptional regulator NagC;protein_id=WP_002224863.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 186486 187631 . - . ID=gene-YPIP275_RS10155;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10155;old_locus_tag=YPIP275_1002 NZ_AAOS02000009.1 Protein Homology CDS 186486 187631 . - 0 ID=cds-WP_002210351.1;Parent=gene-YPIP275_RS10155;Dbxref=GenBank:WP_002210351.1;Name=WP_002210351.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105503.1;locus_tag=YPIP275_RS10155;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_002210351.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 187651 188451 . - . ID=gene-YPIP275_RS10160;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=YPIP275_RS10160;old_locus_tag=YPIP275_1003 NZ_AAOS02000009.1 Protein Homology CDS 187651 188451 . - 0 ID=cds-WP_002210352.1;Parent=gene-YPIP275_RS10160;Dbxref=GenBank:WP_002210352.1;Name=WP_002210352.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459669.1;locus_tag=YPIP275_RS10160;product=glucosamine-6-phosphate deaminase;protein_id=WP_002210352.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 188851 190884 . + . ID=gene-YPIP275_RS10165;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=YPIP275_RS10165;old_locus_tag=YPIP275_1004 NZ_AAOS02000009.1 Protein Homology CDS 188851 190884 . + 0 ID=cds-WP_002210353.1;Parent=gene-YPIP275_RS10165;Dbxref=GenBank:WP_002210353.1;Name=WP_002210353.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210353.1;locus_tag=YPIP275_RS10165;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WP_002210353.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 191149 191607 . + . ID=gene-YPIP275_RS10170;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10170;old_locus_tag=YPIP275_1005 NZ_AAOS02000009.1 Protein Homology CDS 191149 191607 . + 0 ID=cds-WP_002213775.1-26;Parent=gene-YPIP275_RS10170;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS10170;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 191809 193476 . + . ID=gene-YPIP275_RS10175;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=YPIP275_RS10175;old_locus_tag=YPIP275_1006 NZ_AAOS02000009.1 Protein Homology CDS 191809 193476 . + 0 ID=cds-WP_002210354.1;Parent=gene-YPIP275_RS10175;Dbxref=GenBank:WP_002210354.1;Name=WP_002210354.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210354.1;locus_tag=YPIP275_RS10175;product=glutamine--tRNA ligase;protein_id=WP_002210354.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 194182 195603 . + . ID=gene-YPIP275_RS10180;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=YPIP275_RS10180;old_locus_tag=YPIP275_1007 NZ_AAOS02000009.1 Protein Homology CDS 194182 195603 . + 0 ID=cds-WP_002210355.1;Parent=gene-YPIP275_RS10180;Dbxref=GenBank:WP_002210355.1;Name=WP_002210355.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210355.1;locus_tag=YPIP275_RS10180;product=chitoporin ChiP;protein_id=WP_002210355.1;transl_table=11 NZ_AAOS02000009.1 RefSeq pseudogene 195931 198595 . + . ID=gene-YPIP275_RS10185;Name=YPIP275_RS10185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS10185;old_locus_tag=YPIP275_1009;pseudo=true NZ_AAOS02000009.1 Protein Homology CDS 195931 198595 . + 0 ID=cds-YPIP275_RS10185;Parent=gene-YPIP275_RS10185;Note=frameshifted;Ontology_term=GO:0005975,GO:0004563;gbkey=CDS;go_function=beta-N-acetylhexosaminidase activity|0004563||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390571.1;locus_tag=YPIP275_RS10185;product=beta-N-acetylhexosaminidase;pseudo=true;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 199036 199482 . - . ID=gene-YPIP275_RS10190;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=YPIP275_RS10190;old_locus_tag=YPIP275_1010 NZ_AAOS02000009.1 Protein Homology CDS 199036 199482 . - 0 ID=cds-WP_002210357.1;Parent=gene-YPIP275_RS10190;Dbxref=GenBank:WP_002210357.1;Name=WP_002210357.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191941.1;locus_tag=YPIP275_RS10190;product=ferric iron uptake transcriptional regulator;protein_id=WP_002210357.1;transl_table=11 NZ_AAOS02000009.1 RefSeq gene 199849 200376 . - . ID=gene-YPIP275_RS10195;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=YPIP275_RS10195;old_locus_tag=YPIP275_1011 NZ_AAOS02000009.1 Protein Homology CDS 199849 200376 . - 0 ID=cds-WP_002215386.1;Parent=gene-YPIP275_RS10195;Dbxref=GenBank:WP_002215386.1;Name=WP_002215386.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215386.1;locus_tag=YPIP275_RS10195;product=flavodoxin FldA;protein_id=WP_002215386.1;transl_table=11 ##sequence-region NZ_AAOS02000008.1 1 202026 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000008.1 RefSeq region 1 202026 . + . ID=NZ_AAOS02000008.1:1..202026;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000008.1 RefSeq gene 57 542 . + . ID=gene-YPIP275_RS08355;Name=YPIP275_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08355;old_locus_tag=YPIP275_0180 NZ_AAOS02000008.1 Protein Homology CDS 57 542 . + 0 ID=cds-WP_002213869.1;Parent=gene-YPIP275_RS08355;Dbxref=GenBank:WP_002213869.1;Name=WP_002213869.1;Ontology_term=GO:0042546;gbkey=CDS;go_process=cell wall biogenesis|0042546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213869.1;locus_tag=YPIP275_RS08355;product=SMI1/KNR4 family protein;protein_id=WP_002213869.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 592 783 . - . ID=gene-YPIP275_RS08360;Name=YPIP275_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08360;old_locus_tag=YPIP275_0181 NZ_AAOS02000008.1 Protein Homology CDS 592 783 . - 0 ID=cds-WP_002213868.1;Parent=gene-YPIP275_RS08360;Dbxref=GenBank:WP_002213868.1;Name=WP_002213868.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213868.1;locus_tag=YPIP275_RS08360;product=SymE family type I addiction module toxin;protein_id=WP_002213868.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 859 1083 . - . ID=gene-YPIP275_RS08365;Name=YPIP275_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08365 NZ_AAOS02000008.1 Protein Homology CDS 859 1083 . - 0 ID=cds-WP_002213866.1;Parent=gene-YPIP275_RS08365;Dbxref=GenBank:WP_002213866.1;Name=WP_002213866.1;Ontology_term=GO:0016070,GO:0003723,GO:0004521;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213866.1;locus_tag=YPIP275_RS08365;product=SymE family type I addiction module toxin;protein_id=WP_002213866.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 1165 1572 . - . ID=gene-YPIP275_RS08370;Name=YPIP275_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08370;old_locus_tag=YPIP275_0183 NZ_AAOS02000008.1 Protein Homology CDS 1165 1572 . - 0 ID=cds-WP_002210018.1;Parent=gene-YPIP275_RS08370;Dbxref=GenBank:WP_002210018.1;Name=WP_002210018.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104367.1;locus_tag=YPIP275_RS08370;product=helix-turn-helix domain-containing protein;protein_id=WP_002210018.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 1669 1911 . + . ID=gene-YPIP275_RS27145;Name=YPIP275_RS27145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27145;old_locus_tag=YPIP275_0184 NZ_AAOS02000008.1 Protein Homology CDS 1669 1911 . + 0 ID=cds-WP_071526098.1;Parent=gene-YPIP275_RS27145;Dbxref=GenBank:WP_071526098.1;Name=WP_071526098.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023902.6;locus_tag=YPIP275_RS27145;product=VasL domain-containing protein;protein_id=WP_071526098.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 1933 4131 . + . ID=gene-YPIP275_RS08380;Name=YPIP275_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08380;old_locus_tag=YPIP275_0185 NZ_AAOS02000008.1 Protein Homology CDS 1933 4131 . + 0 ID=cds-WP_002210020.1;Parent=gene-YPIP275_RS08380;Dbxref=GenBank:WP_002210020.1;Name=WP_002210020.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193192.1;locus_tag=YPIP275_RS08380;product=type VI secretion system Vgr family protein;protein_id=WP_002210020.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 4134 4556 . + . ID=gene-YPIP275_RS08385;Name=YPIP275_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08385;old_locus_tag=YPIP275_0186 NZ_AAOS02000008.1 Protein Homology CDS 4134 4556 . + 0 ID=cds-WP_002213861.1;Parent=gene-YPIP275_RS08385;Dbxref=GenBank:WP_002213861.1;Name=WP_002213861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213861.1;locus_tag=YPIP275_RS08385;product=DUF1795 domain-containing protein;protein_id=WP_002213861.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 4601 9139 . + . ID=gene-YPIP275_RS08390;Name=YPIP275_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08390;old_locus_tag=YPIP275_0187 NZ_AAOS02000008.1 Protein Homology CDS 4601 9139 . + 0 ID=cds-WP_002210022.1;Parent=gene-YPIP275_RS08390;Dbxref=GenBank:WP_002210022.1;Name=WP_002210022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223804.1;locus_tag=YPIP275_RS08390;product=RHS repeat-associated core domain-containing protein;protein_id=WP_002210022.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 9148 9942 . + . ID=gene-YPIP275_RS08395;Name=YPIP275_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08395;old_locus_tag=YPIP275_0188 NZ_AAOS02000008.1 Protein Homology CDS 9148 9942 . + 0 ID=cds-WP_002210023.1;Parent=gene-YPIP275_RS08395;Dbxref=GenBank:WP_002210023.1;Name=WP_002210023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210023.1;locus_tag=YPIP275_RS08395;product=hypothetical protein;protein_id=WP_002210023.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 10289 11188 . - . ID=gene-YPIP275_RS08400;Name=YPIP275_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08400;old_locus_tag=YPIP275_0189 NZ_AAOS02000008.1 Protein Homology CDS 10289 11188 . - 0 ID=cds-WP_002210024.1;Parent=gene-YPIP275_RS08400;Dbxref=GenBank:WP_002210024.1;Name=WP_002210024.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210024.1;locus_tag=YPIP275_RS08400;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_002210024.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 11185 12315 . - . ID=gene-YPIP275_RS08405;Name=YPIP275_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08405;old_locus_tag=YPIP275_0190 NZ_AAOS02000008.1 Protein Homology CDS 11185 12315 . - 0 ID=cds-WP_002210025.1;Parent=gene-YPIP275_RS08405;Dbxref=GenBank:WP_002210025.1;Name=WP_002210025.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210025.1;locus_tag=YPIP275_RS08405;product=Gfo/Idh/MocA family protein;protein_id=WP_002210025.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 12585 13451 . + . ID=gene-YPIP275_RS08410;Name=YPIP275_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08410;old_locus_tag=YPIP275_0191 NZ_AAOS02000008.1 Protein Homology CDS 12585 13451 . + 0 ID=cds-WP_002210026.1;Parent=gene-YPIP275_RS08410;Dbxref=GenBank:WP_002210026.1;Name=WP_002210026.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414063.1;locus_tag=YPIP275_RS08410;product=helix-turn-helix domain-containing protein;protein_id=WP_002210026.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 13613 14116 . - . ID=gene-YPIP275_RS08415;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=YPIP275_RS08415;old_locus_tag=YPIP275_0192 NZ_AAOS02000008.1 Protein Homology CDS 13613 14116 . - 0 ID=cds-WP_002210027.1;Parent=gene-YPIP275_RS08415;Dbxref=GenBank:WP_002210027.1;Name=WP_002210027.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210027.1;locus_tag=YPIP275_RS08415;product=D-ribose pyranase;protein_id=WP_002210027.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 14122 15051 . - . ID=gene-YPIP275_RS08420;Name=YPIP275_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08420;old_locus_tag=YPIP275_0193 NZ_AAOS02000008.1 Protein Homology CDS 14122 15051 . - 0 ID=cds-WP_002210028.1;Parent=gene-YPIP275_RS08420;Dbxref=GenBank:WP_002210028.1;Name=WP_002210028.1;Ontology_term=GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193186.1;locus_tag=YPIP275_RS08420;product=ribokinase;protein_id=WP_002210028.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 15208 15909 . - . ID=gene-YPIP275_RS08425;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=YPIP275_RS08425;old_locus_tag=YPIP275_0194 NZ_AAOS02000008.1 Protein Homology CDS 15208 15909 . - 0 ID=cds-WP_002210030.1;Parent=gene-YPIP275_RS08425;Dbxref=GenBank:WP_002210030.1;Name=WP_002210030.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210030.1;locus_tag=YPIP275_RS08425;product=deoxyribose-phosphate aldolase;protein_id=WP_002210030.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 16380 16961 . + . ID=gene-YPIP275_RS08430;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=YPIP275_RS08430;old_locus_tag=YPIP275_0197 NZ_AAOS02000008.1 Protein Homology CDS 16380 16961 . + 0 ID=cds-WP_002210032.1;Parent=gene-YPIP275_RS08430;Dbxref=GenBank:WP_002210032.1;Name=WP_002210032.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210032.1;locus_tag=YPIP275_RS08430;product=NADPH-dependent FMN reductase;protein_id=WP_002210032.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 16976 18097 . + . ID=gene-YPIP275_RS08435;Name=YPIP275_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08435;old_locus_tag=YPIP275_0198 NZ_AAOS02000008.1 Protein Homology CDS 16976 18097 . + 0 ID=cds-WP_002210033.1;Parent=gene-YPIP275_RS08435;Dbxref=GenBank:WP_002210033.1;Name=WP_002210033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104376.1;locus_tag=YPIP275_RS08435;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_002210033.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 18116 19264 . + . ID=gene-YPIP275_RS08440;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=YPIP275_RS08440;old_locus_tag=YPIP275_0199 NZ_AAOS02000008.1 Protein Homology CDS 18116 19264 . + 0 ID=cds-WP_002210034.1;Parent=gene-YPIP275_RS08440;Dbxref=GenBank:WP_002210034.1;Name=WP_002210034.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016588500.1;locus_tag=YPIP275_RS08440;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_002210034.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 19276 20070 . + . ID=gene-YPIP275_RS08445;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=YPIP275_RS08445;old_locus_tag=YPIP275_0200 NZ_AAOS02000008.1 Protein Homology CDS 19276 20070 . + 0 ID=cds-WP_002213853.1;Parent=gene-YPIP275_RS08445;Dbxref=GenBank:WP_002213853.1;Name=WP_002213853.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213853.1;locus_tag=YPIP275_RS08445;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_002213853.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 20067 20882 . + . ID=gene-YPIP275_RS08450;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=YPIP275_RS08450;old_locus_tag=YPIP275_0202 NZ_AAOS02000008.1 Protein Homology CDS 20067 20882 . + 0 ID=cds-WP_002210036.1;Parent=gene-YPIP275_RS08450;Dbxref=GenBank:WP_002210036.1;Name=WP_002210036.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ssuB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210036.1;locus_tag=YPIP275_RS08450;product=aliphatic sulfonates ABC transporter ATP-binding protein;protein_id=WP_002210036.1;transl_table=11 NZ_AAOS02000008.1 RefSeq pseudogene 21062 21259 . - . ID=gene-YPIP275_RS27155;Name=YPIP275_RS27155;end_range=21259,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS27155;partial=true;pseudo=true NZ_AAOS02000008.1 Protein Homology CDS 21062 21259 . - 0 ID=cds-YPIP275_RS27155;Parent=gene-YPIP275_RS27155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004519,GO:0090729,GO:0110001;end_range=21259,.;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013574136.1;locus_tag=YPIP275_RS27155;partial=true;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 NZ_AAOS02000008.1 RefSeq pseudogene 21259 21327 . - . ID=gene-YPIP275_RS28565;Name=YPIP275_RS28565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28565;partial=true;pseudo=true;start_range=.,21259 NZ_AAOS02000008.1 Protein Homology CDS 21259 21327 . - 0 ID=cds-YPIP275_RS28565;Parent=gene-YPIP275_RS28565;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=YPIP275_RS28565;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;start_range=.,21259;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 21501 21704 . - . ID=gene-YPIP275_RS08455;Name=YPIP275_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08455;old_locus_tag=YPIP275_0203 NZ_AAOS02000008.1 Protein Homology CDS 21501 21704 . - 0 ID=cds-WP_002210038.1;Parent=gene-YPIP275_RS08455;Dbxref=GenBank:WP_002210038.1;Name=WP_002210038.1;Ontology_term=GO:0044010,GO:0000987,GO:0015643;gbkey=CDS;go_function=cis-regulatory region sequence-specific DNA binding|0000987||IEA,toxic substance binding|0015643||IEA;go_process=single-species biofilm formation|0044010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210038.1;locus_tag=YPIP275_RS08455;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_002210038.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 22158 23513 . + . ID=gene-YPIP275_RS08460;Name=YPIP275_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08460;old_locus_tag=YPIP275_0204 NZ_AAOS02000008.1 Protein Homology CDS 22158 23513 . + 0 ID=cds-WP_002210039.1;Parent=gene-YPIP275_RS08460;Dbxref=GenBank:WP_002210039.1;Name=WP_002210039.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210039.1;locus_tag=YPIP275_RS08460;product=NCS2 family permease;protein_id=WP_002210039.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 23862 25511 . + . ID=gene-YPIP275_RS08465;Name=YPIP275_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08465;old_locus_tag=YPIP275_0205 NZ_AAOS02000008.1 Protein Homology CDS 23862 25511 . + 0 ID=cds-WP_002215816.1;Parent=gene-YPIP275_RS08465;Dbxref=GenBank:WP_002215816.1;Name=WP_002215816.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704764.1;locus_tag=YPIP275_RS08465;product=Na+/H+ antiporter;protein_id=WP_002215816.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 25729 26916 . - . ID=gene-YPIP275_RS08470;Name=YPIP275_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08470;old_locus_tag=YPIP275_0206 NZ_AAOS02000008.1 Protein Homology CDS 25729 26916 . - 0 ID=cds-WP_002210041.1;Parent=gene-YPIP275_RS08470;Dbxref=GenBank:WP_002210041.1;Name=WP_002210041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210041.1;locus_tag=YPIP275_RS08470;product=hypothetical protein;protein_id=WP_002210041.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 27068 27988 . - . ID=gene-YPIP275_RS08475;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=YPIP275_RS08475;old_locus_tag=YPIP275_0207 NZ_AAOS02000008.1 Protein Homology CDS 27068 27988 . - 0 ID=cds-WP_002210042.1;Parent=gene-YPIP275_RS08475;Dbxref=GenBank:WP_002210042.1;Name=WP_002210042.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004711175.1;locus_tag=YPIP275_RS08475;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_002210042.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 28782 29771 . + . ID=gene-YPIP275_RS08480;Name=YPIP275_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08480;old_locus_tag=YPIP275_0208 NZ_AAOS02000008.1 Protein Homology CDS 28782 29771 . + 0 ID=cds-WP_002210043.1;Parent=gene-YPIP275_RS08480;Dbxref=GenBank:WP_002210043.1;Name=WP_002210043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365221.1;locus_tag=YPIP275_RS08480;product=autoinducer 2 ABC transporter substrate-binding protein;protein_id=WP_002210043.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 29975 31471 . + . ID=gene-YPIP275_RS08485;Name=YPIP275_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08485;old_locus_tag=YPIP275_0209 NZ_AAOS02000008.1 Protein Homology CDS 29975 31471 . + 0 ID=cds-WP_002210044.1;Parent=gene-YPIP275_RS08485;Dbxref=GenBank:WP_002210044.1;Name=WP_002210044.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191419.1;locus_tag=YPIP275_RS08485;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002210044.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 31464 32453 . + . ID=gene-YPIP275_RS08490;Name=YPIP275_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08490;old_locus_tag=YPIP275_0210 NZ_AAOS02000008.1 Protein Homology CDS 31464 32453 . + 0 ID=cds-WP_002210045.1;Parent=gene-YPIP275_RS08490;Dbxref=GenBank:WP_002210045.1;Name=WP_002210045.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210045.1;locus_tag=YPIP275_RS08490;product=ABC transporter permease;protein_id=WP_002210045.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 32455 33408 . + . ID=gene-YPIP275_RS08495;Name=YPIP275_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08495;old_locus_tag=YPIP275_0211 NZ_AAOS02000008.1 Protein Homology CDS 32455 33408 . + 0 ID=cds-WP_002210046.1;Parent=gene-YPIP275_RS08495;Dbxref=GenBank:WP_002210046.1;Name=WP_002210046.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193178.1;locus_tag=YPIP275_RS08495;product=ABC transporter permease;protein_id=WP_002210046.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 33427 35064 . + . ID=gene-YPIP275_RS08500;Name=YPIP275_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08500;old_locus_tag=YPIP275_0212 NZ_AAOS02000008.1 Protein Homology CDS 33427 35064 . + 0 ID=cds-WP_002210047.1;Parent=gene-YPIP275_RS08500;Dbxref=GenBank:WP_002210047.1;Name=WP_002210047.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210047.1;locus_tag=YPIP275_RS08500;product=FGGY-family carbohydrate kinase;protein_id=WP_002210047.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 35061 35666 . + . ID=gene-YPIP275_RS08505;Name=YPIP275_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08505;old_locus_tag=YPIP275_0213 NZ_AAOS02000008.1 Protein Homology CDS 35061 35666 . + 0 ID=cds-WP_002210048.1;Parent=gene-YPIP275_RS08505;Dbxref=GenBank:WP_002210048.1;Name=WP_002210048.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229272.1;locus_tag=YPIP275_RS08505;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=WP_002210048.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 35856 36707 . - . ID=gene-YPIP275_RS08510;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=YPIP275_RS08510;old_locus_tag=YPIP275_0214 NZ_AAOS02000008.1 Protein Homology CDS 35856 36707 . - 0 ID=cds-WP_002228699.1;Parent=gene-YPIP275_RS08510;Dbxref=GenBank:WP_002228699.1;Name=WP_002228699.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228699.1;locus_tag=YPIP275_RS08510;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_002228699.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 36961 38307 . + . ID=gene-YPIP275_RS08515;Name=YPIP275_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08515;old_locus_tag=YPIP275_0215 NZ_AAOS02000008.1 Protein Homology CDS 36961 38307 . + 0 ID=cds-WP_002210050.1;Parent=gene-YPIP275_RS08515;Dbxref=GenBank:WP_002210050.1;Name=WP_002210050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220957.1;locus_tag=YPIP275_RS08515;product=esterase-like activity of phytase family protein;protein_id=WP_002210050.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 38414 39589 . - . ID=gene-YPIP275_RS08520;Name=YPIP275_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08520;old_locus_tag=YPIP275_0216 NZ_AAOS02000008.1 Protein Homology CDS 38414 39589 . - 0 ID=cds-WP_002210051.1;Parent=gene-YPIP275_RS08520;Dbxref=GenBank:WP_002210051.1;Name=WP_002210051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079427.1;locus_tag=YPIP275_RS08520;product=coiled-coil domain-containing protein;protein_id=WP_002210051.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 39994 40452 . + . ID=gene-YPIP275_RS08530;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08530;old_locus_tag=YPIP275_0217 NZ_AAOS02000008.1 Protein Homology CDS 39994 40452 . + 0 ID=cds-WP_002213759.1-22;Parent=gene-YPIP275_RS08530;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS08530;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 40635 40847 . - . ID=gene-YPIP275_RS08535;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=YPIP275_RS08535;old_locus_tag=YPIP275_0218 NZ_AAOS02000008.1 Protein Homology CDS 40635 40847 . - 0 ID=cds-WP_002210052.1;Parent=gene-YPIP275_RS08535;Dbxref=GenBank:WP_002210052.1;Name=WP_002210052.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210052.1;locus_tag=YPIP275_RS08535;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_002210052.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 41107 41319 . - . ID=gene-YPIP275_RS08540;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=YPIP275_RS08540;old_locus_tag=YPIP275_0219 NZ_AAOS02000008.1 Protein Homology CDS 41107 41319 . - 0 ID=cds-WP_002210053.1;Parent=gene-YPIP275_RS08540;Dbxref=GenBank:WP_002210053.1;Name=WP_002210053.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210052.1;locus_tag=YPIP275_RS08540;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_002210053.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 41852 42319 . - . ID=gene-YPIP275_RS08550;Name=YPIP275_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08550;old_locus_tag=YPIP275_0220 NZ_AAOS02000008.1 Protein Homology CDS 41852 42319 . - 0 ID=cds-WP_002210054.1;Parent=gene-YPIP275_RS08550;Dbxref=GenBank:WP_002210054.1;Name=WP_002210054.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165921.1;locus_tag=YPIP275_RS08550;product=outer membrane lipoprotein;protein_id=WP_002210054.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 42795 43607 . + . ID=gene-YPIP275_RS08555;Name=YPIP275_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08555;old_locus_tag=YPIP275_0221 NZ_AAOS02000008.1 Protein Homology CDS 42795 43607 . + 0 ID=cds-WP_002210055.1;Parent=gene-YPIP275_RS08555;Dbxref=GenBank:WP_002210055.1;Name=WP_002210055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104386.1;locus_tag=YPIP275_RS08555;product=N-acyl homoserine lactonase family protein;protein_id=WP_002210055.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 43672 44562 . + . ID=gene-YPIP275_RS08560;Name=YPIP275_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08560;old_locus_tag=YPIP275_0222 NZ_AAOS02000008.1 Protein Homology CDS 43672 44562 . + 0 ID=cds-WP_002210056.1;Parent=gene-YPIP275_RS08560;Dbxref=GenBank:WP_002210056.1;Name=WP_002210056.1;Ontology_term=GO:0016491,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210056.1;locus_tag=YPIP275_RS08560;product=NAD(P)-dependent oxidoreductase;protein_id=WP_002210056.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 44740 45135 . + . ID=gene-YPIP275_RS08565;Name=YPIP275_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08565;old_locus_tag=YPIP275_0223 NZ_AAOS02000008.1 Protein Homology CDS 44740 45135 . + 0 ID=cds-WP_002217470.1;Parent=gene-YPIP275_RS08565;Dbxref=GenBank:WP_002217470.1;Name=WP_002217470.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217470.1;locus_tag=YPIP275_RS08565;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_002217470.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 45289 46653 . + . ID=gene-YPIP275_RS08570;Name=YPIP275_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08570;old_locus_tag=YPIP275_0224 NZ_AAOS02000008.1 Protein Homology CDS 45289 46653 . + 0 ID=cds-WP_002210058.1;Parent=gene-YPIP275_RS08570;Dbxref=GenBank:WP_002210058.1;Name=WP_002210058.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210058.1;locus_tag=YPIP275_RS08570;product=MFS transporter;protein_id=WP_002210058.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 46743 47405 . + . ID=gene-YPIP275_RS08575;Name=YPIP275_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08575;old_locus_tag=YPIP275_0225 NZ_AAOS02000008.1 Protein Homology CDS 46743 47405 . + 0 ID=cds-WP_002210059.1;Parent=gene-YPIP275_RS08575;Dbxref=GenBank:WP_002210059.1;Name=WP_002210059.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210059.1;locus_tag=YPIP275_RS08575;product=GntR family transcriptional regulator;protein_id=WP_002210059.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 47471 47947 . + . ID=gene-YPIP275_RS08580;Name=YPIP275_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08580;old_locus_tag=YPIP275_0226 NZ_AAOS02000008.1 Protein Homology CDS 47471 47947 . + 0 ID=cds-WP_002210060.1;Parent=gene-YPIP275_RS08580;Dbxref=GenBank:WP_002210060.1;Name=WP_002210060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210060.1;locus_tag=YPIP275_RS08580;product=YrhA family protein;protein_id=WP_002210060.1;transl_table=11 NZ_AAOS02000008.1 RefSeq pseudogene 48100 48297 . + . ID=gene-YPIP275_RS08585;Name=YPIP275_RS08585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS08585;partial=true;pseudo=true;start_range=.,48100 NZ_AAOS02000008.1 Protein Homology CDS 48100 48297 . + 0 ID=cds-YPIP275_RS08585;Parent=gene-YPIP275_RS08585;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0030153,GO:0015643;gbkey=CDS;go_function=toxic substance binding|0015643||IEA;go_process=bacteriocin immunity|0030153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192913.1;locus_tag=YPIP275_RS08585;partial=true;product=colicin immunity domain-containing protein;pseudo=true;start_range=.,48100;transl_table=11 NZ_AAOS02000008.1 RefSeq pseudogene 48420 48590 . + . ID=gene-YPIP275_RS27165;Name=YPIP275_RS27165;end_range=48590,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS27165;partial=true;pseudo=true NZ_AAOS02000008.1 Protein Homology CDS 48420 48590 . + 0 ID=cds-YPIP275_RS27165;Parent=gene-YPIP275_RS27165;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0051276,GO:0003677;end_range=48590,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217366.1;locus_tag=YPIP275_RS27165;partial=true;product=terminase small subunit;pseudo=true;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 48701 48997 . - . ID=gene-YPIP275_RS08590;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=YPIP275_RS08590;old_locus_tag=YPIP275_0227 NZ_AAOS02000008.1 Protein Homology CDS 48701 48997 . - 0 ID=cds-WP_002210061.1;Parent=gene-YPIP275_RS08590;Dbxref=GenBank:WP_002210061.1;Name=WP_002210061.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=YPIP275_RS08590;product=DNA-binding transcriptional regulator Fis;protein_id=WP_002210061.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 49022 49987 . - . ID=gene-YPIP275_RS08595;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=YPIP275_RS08595;old_locus_tag=YPIP275_0228 NZ_AAOS02000008.1 Protein Homology CDS 49022 49987 . - 0 ID=cds-WP_002210062.1;Parent=gene-YPIP275_RS08595;Dbxref=GenBank:WP_002210062.1;Name=WP_002210062.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=YPIP275_RS08595;product=tRNA dihydrouridine synthase DusB;protein_id=WP_002210062.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 50576 51457 . - . ID=gene-YPIP275_RS08600;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08600;old_locus_tag=YPIP275_0230 NZ_AAOS02000008.1 Protein Homology CDS 50576 51457 . - 0 ID=cds-WP_002220963.1;Parent=gene-YPIP275_RS08600;Dbxref=GenBank:WP_002220963.1;Name=WP_002220963.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163101.1;locus_tag=YPIP275_RS08600;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_002220963.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 51533 52987 . - . ID=gene-YPIP275_RS08605;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=YPIP275_RS08605;old_locus_tag=YPIP275_0231 NZ_AAOS02000008.1 Protein Homology CDS 51533 52987 . - 0 ID=cds-WP_002210065.1;Parent=gene-YPIP275_RS08605;Dbxref=GenBank:WP_002210065.1;Name=WP_002210065.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210065.1;locus_tag=YPIP275_RS08605;product=sodium/pantothenate symporter;protein_id=WP_002210065.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 52977 53219 . - . ID=gene-YPIP275_RS08610;Name=YPIP275_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08610;old_locus_tag=YPIP275_0232 NZ_AAOS02000008.1 Protein Homology CDS 52977 53219 . - 0 ID=cds-WP_002210066.1;Parent=gene-YPIP275_RS08610;Dbxref=GenBank:WP_002210066.1;Name=WP_002210066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210066.1;locus_tag=YPIP275_RS08610;product=YhdT family protein;protein_id=WP_002210066.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 54155 54331 . + . ID=gene-YPIP275_RS28570;Name=YPIP275_RS28570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28570 NZ_AAOS02000008.1 Protein Homology CDS 54155 54331 . + 0 ID=cds-WP_162828711.1;Parent=gene-YPIP275_RS28570;Dbxref=GenBank:WP_162828711.1;Name=WP_162828711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414060.1;locus_tag=YPIP275_RS28570;product=hypothetical protein;protein_id=WP_162828711.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 54577 55926 . - . ID=gene-YPIP275_RS08615;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=YPIP275_RS08615;old_locus_tag=YPIP275_0235 NZ_AAOS02000008.1 Protein Homology CDS 54577 55926 . - 0 ID=cds-WP_002210069.1;Parent=gene-YPIP275_RS08615;Dbxref=GenBank:WP_002210069.1;Name=WP_002210069.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817284.1;locus_tag=YPIP275_RS08615;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_002210069.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 55938 56402 . - . ID=gene-YPIP275_RS08620;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=YPIP275_RS08620;old_locus_tag=YPIP275_0236 NZ_AAOS02000008.1 Protein Homology CDS 55938 56402 . - 0 ID=cds-WP_002210070.1;Parent=gene-YPIP275_RS08620;Dbxref=GenBank:WP_002210070.1;Name=WP_002210070.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392389.1;locus_tag=YPIP275_RS08620;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_002210070.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 56560 57012 . - . ID=gene-YPIP275_RS08625;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS08625;old_locus_tag=YPIP275_0237 NZ_AAOS02000008.1 Protein Homology CDS 56560 57012 . - 0 ID=cds-WP_002210071.1;Parent=gene-YPIP275_RS08625;Dbxref=GenBank:WP_002210071.1;Name=WP_002210071.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210071.1;locus_tag=YPIP275_RS08625;product=type II 3-dehydroquinate dehydratase;protein_id=WP_002210071.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 57275 57895 . - . ID=gene-YPIP275_RS08630;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;gene_synonym=yedZ;locus_tag=YPIP275_RS08630;old_locus_tag=YPIP275_0238 NZ_AAOS02000008.1 Protein Homology CDS 57275 57895 . - 0 ID=cds-WP_002210072.1;Parent=gene-YPIP275_RS08630;Dbxref=GenBank:WP_002210072.1;Name=WP_002210072.1;Ontology_term=GO:0009055,GO:0010181,GO:0020037;gbkey=CDS;gene=msrQ;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210072.1;locus_tag=YPIP275_RS08630;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_002210072.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 57895 58995 . - . ID=gene-YPIP275_RS08635;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;gene_synonym=yedY;locus_tag=YPIP275_RS08635;old_locus_tag=YPIP275_0239 NZ_AAOS02000008.1 Protein Homology CDS 57895 58995 . - 0 ID=cds-WP_002210073.1;Parent=gene-YPIP275_RS08635;Dbxref=GenBank:WP_002210073.1;Name=WP_002210073.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210073.1;locus_tag=YPIP275_RS08635;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_002210073.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 59218 60195 . - . ID=gene-YPIP275_RS08640;Name=acuI;gbkey=Gene;gene=acuI;gene_biotype=protein_coding;locus_tag=YPIP275_RS08640;old_locus_tag=YPIP275_0240 NZ_AAOS02000008.1 Protein Homology CDS 59218 60195 . - 0 ID=cds-WP_002210074.1;Parent=gene-YPIP275_RS08640;Dbxref=GenBank:WP_002210074.1;Name=WP_002210074.1;gbkey=CDS;gene=acuI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080084.1;locus_tag=YPIP275_RS08640;product=acrylyl-CoA reductase (NADPH);protein_id=WP_002210074.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 60596 62512 . + . ID=gene-YPIP275_RS08645;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=YPIP275_RS08645;old_locus_tag=YPIP275_0241 NZ_AAOS02000008.1 Protein Homology CDS 60596 62512 . + 0 ID=cds-WP_002210075.1;Parent=gene-YPIP275_RS08645;Dbxref=GenBank:WP_002210075.1;Name=WP_002210075.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193164.1;locus_tag=YPIP275_RS08645;product=RNase E specificity factor CsrD;protein_id=WP_002210075.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 62849 63892 . + . ID=gene-YPIP275_RS08650;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=YPIP275_RS08650;old_locus_tag=YPIP275_0242 NZ_AAOS02000008.1 Protein Homology CDS 62849 63892 . + 0 ID=cds-WP_002228205.1;Parent=gene-YPIP275_RS08650;Dbxref=GenBank:WP_002228205.1;Name=WP_002228205.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=YPIP275_RS08650;product=rod shape-determining protein MreB;protein_id=WP_002228205.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 64096 65091 . + . ID=gene-YPIP275_RS08655;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=YPIP275_RS08655;old_locus_tag=YPIP275_0243 NZ_AAOS02000008.1 Protein Homology CDS 64096 65091 . + 0 ID=cds-WP_002210076.1;Parent=gene-YPIP275_RS08655;Dbxref=GenBank:WP_002210076.1;Name=WP_002210076.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210076.1;locus_tag=YPIP275_RS08655;product=rod shape-determining protein MreC;protein_id=WP_002210076.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 65088 65576 . + . ID=gene-YPIP275_RS08660;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=YPIP275_RS08660;old_locus_tag=YPIP275_0244 NZ_AAOS02000008.1 Protein Homology CDS 65088 65576 . + 0 ID=cds-WP_002210077.1;Parent=gene-YPIP275_RS08660;Dbxref=GenBank:WP_002210077.1;Name=WP_002210077.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210077.1;locus_tag=YPIP275_RS08660;product=rod shape-determining protein MreD;protein_id=WP_002210077.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 65590 66183 . + . ID=gene-YPIP275_RS08665;Name=YPIP275_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08665;old_locus_tag=YPIP275_0245 NZ_AAOS02000008.1 Protein Homology CDS 65590 66183 . + 0 ID=cds-WP_002210078.1;Parent=gene-YPIP275_RS08665;Dbxref=GenBank:WP_002210078.1;Name=WP_002210078.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210078.1;locus_tag=YPIP275_RS08665;product=Maf family protein;protein_id=WP_002210078.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 66173 67642 . + . ID=gene-YPIP275_RS08670;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=YPIP275_RS08670;old_locus_tag=YPIP275_0246 NZ_AAOS02000008.1 Protein Homology CDS 66173 67642 . + 0 ID=cds-WP_002210079.1;Parent=gene-YPIP275_RS08670;Dbxref=GenBank:WP_002210079.1;Name=WP_002210079.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=YPIP275_RS08670;product=ribonuclease G;protein_id=WP_002210079.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 67736 71659 . + . ID=gene-YPIP275_RS08675;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=YPIP275_RS08675;old_locus_tag=YPIP275_0247 NZ_AAOS02000008.1 Protein Homology CDS 67736 71659 . + 0 ID=cds-WP_002210080.1;Parent=gene-YPIP275_RS08675;Dbxref=GenBank:WP_002210080.1;Name=WP_002210080.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210080.1;locus_tag=YPIP275_RS08675;product=AsmA2 domain-containing protein YhdP;protein_id=WP_002210080.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 71656 72525 . + . ID=gene-YPIP275_RS08680;Name=nit1;gbkey=Gene;gene=nit1;gene_biotype=protein_coding;locus_tag=YPIP275_RS08680;old_locus_tag=YPIP275_0248 NZ_AAOS02000008.1 Protein Homology CDS 71656 72525 . + 0 ID=cds-WP_002210081.1;Parent=gene-YPIP275_RS08680;Dbxref=GenBank:WP_002210081.1;Name=WP_002210081.1;Ontology_term=GO:0008152,GO:0110050;gbkey=CDS;gene=nit1;go_function=deaminated glutathione amidase activity|0110050||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303479.1;locus_tag=YPIP275_RS08680;product=deaminated glutathione amidase;protein_id=WP_002210081.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 72537 73982 . + . ID=gene-YPIP275_RS08685;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=YPIP275_RS08685;old_locus_tag=YPIP275_0249 NZ_AAOS02000008.1 Protein Homology CDS 72537 73982 . + 0 ID=cds-WP_002210082.1;Parent=gene-YPIP275_RS08685;Dbxref=GenBank:WP_002210082.1;Name=WP_002210082.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229084.1;locus_tag=YPIP275_RS08685;product=metalloprotease TldD;protein_id=WP_002210082.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 74185 77043 . - . ID=gene-YPIP275_RS08690;Name=YPIP275_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08690;old_locus_tag=YPIP275_0251 NZ_AAOS02000008.1 Protein Homology CDS 74185 77043 . - 0 ID=cds-WP_002210083.1;Parent=gene-YPIP275_RS08690;Dbxref=GenBank:WP_002210083.1;Name=WP_002210083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227239.1;locus_tag=YPIP275_RS08690;product=RHS repeat domain-containing protein;protein_id=WP_002210083.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 77068 79899 . - . ID=gene-YPIP275_RS08695;Name=YPIP275_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08695;old_locus_tag=YPIP275_0252 NZ_AAOS02000008.1 Protein Homology CDS 77068 79899 . - 0 ID=cds-WP_002210084.1;Parent=gene-YPIP275_RS08695;Dbxref=GenBank:WP_002210084.1;Name=WP_002210084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002402754.1;locus_tag=YPIP275_RS08695;product=RHS repeat protein;protein_id=WP_002210084.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 79940 80212 . - . ID=gene-YPIP275_RS29205;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=YPIP275_RS29205 NZ_AAOS02000008.1 Protein Homology CDS 79940 80212 . - 0 ID=cds-WP_042468712.1;Parent=gene-YPIP275_RS29205;Dbxref=GenBank:WP_042468712.1;Name=WP_042468712.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210085.1;locus_tag=YPIP275_RS29205;product=Rz1-like lysis system protein LysC;protein_id=WP_042468712.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 80100 80459 . - . ID=gene-YPIP275_RS08705;Name=YPIP275_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08705;old_locus_tag=YPIP275_0254 NZ_AAOS02000008.1 Protein Homology CDS 80100 80459 . - 0 ID=cds-WP_002210086.1;Parent=gene-YPIP275_RS08705;Dbxref=GenBank:WP_002210086.1;Name=WP_002210086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414059.1;locus_tag=YPIP275_RS08705;product=DUF2570 domain-containing protein;protein_id=WP_002210086.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 80456 80857 . - . ID=gene-YPIP275_RS08710;Name=YPIP275_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08710;old_locus_tag=YPIP275_0255 NZ_AAOS02000008.1 Protein Homology CDS 80456 80857 . - 0 ID=cds-WP_002210087.1;Parent=gene-YPIP275_RS08710;Dbxref=GenBank:WP_002210087.1;Name=WP_002210087.1;Ontology_term=GO:0071554,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=cell wall organization or biogenesis|0071554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210087.1;locus_tag=YPIP275_RS08710;product=M15 family metallopeptidase;protein_id=WP_002210087.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 80870 81172 . - . ID=gene-YPIP275_RS08715;Name=YPIP275_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08715;old_locus_tag=YPIP275_0256 NZ_AAOS02000008.1 Protein Homology CDS 80870 81172 . - 0 ID=cds-WP_002214300.1;Parent=gene-YPIP275_RS08715;Dbxref=GenBank:WP_002214300.1;Name=WP_002214300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214300.1;locus_tag=YPIP275_RS08715;product=phage holin family protein;protein_id=WP_002214300.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 81306 85796 . - . ID=gene-YPIP275_RS08720;Name=YPIP275_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08720;old_locus_tag=YPIP275_0257 NZ_AAOS02000008.1 Protein Homology CDS 81306 85796 . - 0 ID=cds-WP_002210089.1;Parent=gene-YPIP275_RS08720;Dbxref=GenBank:WP_002210089.1;Name=WP_002210089.1;Ontology_term=GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210089.1;locus_tag=YPIP275_RS08720;product=SpvB/TcaC N-terminal domain-containing protein;protein_id=WP_002210089.1;transl_table=11 NZ_AAOS02000008.1 RefSeq pseudogene 85853 89445 . - . ID=gene-YPIP275_RS29350;Name=YPIP275_RS29350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29350;old_locus_tag=YPIP275_0258;pseudo=true NZ_AAOS02000008.1 Protein Homology CDS 85853 89445 . - 0 ID=cds-YPIP275_RS29350;Parent=gene-YPIP275_RS29350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303483.1;locus_tag=YPIP275_RS29350;product=Tc toxin subunit A-related protein;pseudo=true;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 89486 91987 . - . ID=gene-YPIP275_RS08735;Name=YPIP275_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08735;old_locus_tag=YPIP275_0259 NZ_AAOS02000008.1 Protein Homology CDS 89486 91987 . - 0 ID=cds-WP_002210090.1;Parent=gene-YPIP275_RS08735;Dbxref=GenBank:WP_002210090.1;Name=WP_002210090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303484.1;locus_tag=YPIP275_RS08735;product=Tc toxin subunit A;protein_id=WP_002210090.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 92223 93089 . - . ID=gene-YPIP275_RS08740;Name=YPIP275_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08740;old_locus_tag=YPIP275_0260 NZ_AAOS02000008.1 Protein Homology CDS 92223 93089 . - 0 ID=cds-WP_002214297.1;Parent=gene-YPIP275_RS08740;Dbxref=GenBank:WP_002214297.1;Name=WP_002214297.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214297.1;locus_tag=YPIP275_RS08740;product=LysR family transcriptional regulator;protein_id=WP_002214297.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 93350 94261 . - . ID=gene-YPIP275_RS08745;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=YPIP275_RS08745;old_locus_tag=YPIP275_0261 NZ_AAOS02000008.1 Protein Homology CDS 93350 94261 . - 0 ID=cds-WP_002210092.1;Parent=gene-YPIP275_RS08745;Dbxref=GenBank:WP_002210092.1;Name=WP_002210092.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414054.1;locus_tag=YPIP275_RS08745;product=HTH-type transcriptional activator AaeR;protein_id=WP_002210092.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 94564 94767 . + . ID=gene-YPIP275_RS08750;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=YPIP275_RS08750;old_locus_tag=YPIP275_0262 NZ_AAOS02000008.1 Protein Homology CDS 94564 94767 . + 0 ID=cds-WP_002210093.1;Parent=gene-YPIP275_RS08750;Dbxref=GenBank:WP_002210093.1;Name=WP_002210093.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005174323.1;locus_tag=YPIP275_RS08750;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_002210093.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 94775 95710 . + . ID=gene-YPIP275_RS08755;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08755;old_locus_tag=YPIP275_0263 NZ_AAOS02000008.1 Protein Homology CDS 94775 95710 . + 0 ID=cds-WP_002210094.1;Parent=gene-YPIP275_RS08755;Dbxref=GenBank:WP_002210094.1;Name=WP_002210094.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650497.1;locus_tag=YPIP275_RS08755;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_002210094.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 95712 97667 . + . ID=gene-YPIP275_RS08760;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=YPIP275_RS08760;old_locus_tag=YPIP275_0264 NZ_AAOS02000008.1 Protein Homology CDS 95712 97667 . + 0 ID=cds-WP_002210095.1;Parent=gene-YPIP275_RS08760;Dbxref=GenBank:WP_002210095.1;Name=WP_002210095.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014462485.1;locus_tag=YPIP275_RS08760;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_002210095.1;transl_table=11 NZ_AAOS02000008.1 RefSeq pseudogene 97934 99402 . + . ID=gene-YPIP275_RS08765;Name=YPIP275_RS08765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS08765;old_locus_tag=YPIP275_0265;pseudo=true NZ_AAOS02000008.1 Protein Homology CDS 97934 99402 . + 0 ID=cds-YPIP275_RS08765;Parent=gene-YPIP275_RS08765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193154.1;locus_tag=YPIP275_RS08765;product=NAD-dependent succinate-semialdehyde dehydrogenase;pseudo=true;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 99597 100070 . + . ID=gene-YPIP275_RS08775;Name=YPIP275_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08775;old_locus_tag=YPIP275_0268 NZ_AAOS02000008.1 Protein Homology CDS 99597 100070 . + 0 ID=cds-WP_002214288.1;Parent=gene-YPIP275_RS08775;Dbxref=GenBank:WP_002214288.1;Name=WP_002214288.1;Ontology_term=GO:0003723,GO:0004521;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214288.1;locus_tag=YPIP275_RS08775;product=ribonuclease;protein_id=WP_002214288.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 100075 100356 . + . ID=gene-YPIP275_RS08780;Name=YPIP275_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08780;old_locus_tag=YPIP275_0269 NZ_AAOS02000008.1 Protein Homology CDS 100075 100356 . + 0 ID=cds-WP_002210098.1;Parent=gene-YPIP275_RS08780;Dbxref=GenBank:WP_002210098.1;Name=WP_002210098.1;Ontology_term=GO:0046983;gbkey=CDS;go_function=protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210098.1;locus_tag=YPIP275_RS08780;product=barstar family protein;protein_id=WP_002210098.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 100468 101016 . - . ID=gene-YPIP275_RS08785;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08785;old_locus_tag=YPIP275_0270 NZ_AAOS02000008.1 Protein Homology CDS 100468 101016 . - 0 ID=cds-WP_002210099.1;Parent=gene-YPIP275_RS08785;Dbxref=GenBank:WP_002210099.1;Name=WP_002210099.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210099.1;locus_tag=YPIP275_RS08785;product=ribosome biogenesis factor YjgA;protein_id=WP_002210099.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 101197 102537 . + . ID=gene-YPIP275_RS08790;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08790;old_locus_tag=YPIP275_0271 NZ_AAOS02000008.1 Protein Homology CDS 101197 102537 . + 0 ID=cds-WP_002210100.1;Parent=gene-YPIP275_RS08790;Dbxref=GenBank:WP_002210100.1;Name=WP_002210100.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193152.1;locus_tag=YPIP275_RS08790;product=metalloprotease PmbA;protein_id=WP_002210100.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 102786 103430 . + . ID=gene-YPIP275_RS08795;Name=YPIP275_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08795;old_locus_tag=YPIP275_0272 NZ_AAOS02000008.1 Protein Homology CDS 102786 103430 . + 0 ID=cds-WP_011055205.1;Parent=gene-YPIP275_RS08795;Dbxref=GenBank:WP_011055205.1;Name=WP_011055205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011055205.1;locus_tag=YPIP275_RS08795;product=hypothetical protein;protein_id=WP_011055205.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 103638 104024 . + . ID=gene-YPIP275_RS08800;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=YPIP275_RS08800;old_locus_tag=YPIP275_0273 NZ_AAOS02000008.1 Protein Homology CDS 103638 104024 . + 0 ID=cds-WP_002210102.1;Parent=gene-YPIP275_RS08800;Dbxref=GenBank:WP_002210102.1;Name=WP_002210102.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210102.1;locus_tag=YPIP275_RS08800;product=cytochrome b562;protein_id=WP_002210102.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 104248 104658 . - . ID=gene-YPIP275_RS08805;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=YPIP275_RS08805;old_locus_tag=YPIP275_0274 NZ_AAOS02000008.1 Protein Homology CDS 104248 104658 . - 0 ID=cds-WP_002210103.1;Parent=gene-YPIP275_RS08805;Dbxref=GenBank:WP_002210103.1;Name=WP_002210103.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210103.1;locus_tag=YPIP275_RS08805;product=nucleoside diphosphate kinase regulator;protein_id=WP_002210103.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 105011 106678 . - . ID=gene-YPIP275_RS08810;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=YPIP275_RS08810;old_locus_tag=YPIP275_0275 NZ_AAOS02000008.1 Protein Homology CDS 105011 106678 . - 0 ID=cds-WP_002210104.1;Parent=gene-YPIP275_RS08810;Dbxref=GenBank:WP_002210104.1;Name=WP_002210104.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210104.1;locus_tag=YPIP275_RS08810;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_002210104.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 106773 108188 . - . ID=gene-YPIP275_RS08815;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=YPIP275_RS08815;old_locus_tag=YPIP275_0276 NZ_AAOS02000008.1 Protein Homology CDS 106773 108188 . - 0 ID=cds-WP_002215779.1;Parent=gene-YPIP275_RS08815;Dbxref=GenBank:WP_002215779.1;Name=WP_002215779.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817268.1;locus_tag=YPIP275_RS08815;product=PTS trehalose transporter subunit IIBC;protein_id=WP_002215779.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 108599 109552 . - . ID=gene-YPIP275_RS08820;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=YPIP275_RS08820;old_locus_tag=YPIP275_0277 NZ_AAOS02000008.1 Protein Homology CDS 108599 109552 . - 0 ID=cds-WP_002210106.1;Parent=gene-YPIP275_RS08820;Dbxref=GenBank:WP_002210106.1;Name=WP_002210106.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002426355.1;locus_tag=YPIP275_RS08820;product=trehalose operon repressor TreR;protein_id=WP_002210106.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 109786 110262 . - . ID=gene-YPIP275_RS08825;Name=YPIP275_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08825;old_locus_tag=YPIP275_0278 NZ_AAOS02000008.1 Protein Homology CDS 109786 110262 . - 0 ID=cds-WP_002210107.1;Parent=gene-YPIP275_RS08825;Dbxref=GenBank:WP_002210107.1;Name=WP_002210107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256866.1;locus_tag=YPIP275_RS08825;product=PliI family lysozyme inhibitor of I-type lysozyme;protein_id=WP_002210107.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 110378 111160 . - . ID=gene-YPIP275_RS08830;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS08830;old_locus_tag=YPIP275_0279 NZ_AAOS02000008.1 Protein Homology CDS 110378 111160 . - 0 ID=cds-WP_001317493.1-34;Parent=gene-YPIP275_RS08830;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS08830;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 111157 112179 . - . ID=gene-YPIP275_RS08835;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08835;old_locus_tag=YPIP275_0280 NZ_AAOS02000008.1 Protein Homology CDS 111157 112179 . - 0 ID=cds-WP_000255944.1-28;Parent=gene-YPIP275_RS08835;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS08835;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 112520 112906 . - . ID=gene-YPIP275_RS08840;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08840;old_locus_tag=YPIP275_0282 NZ_AAOS02000008.1 Protein Homology CDS 112520 112906 . - 0 ID=cds-WP_002210109.1;Parent=gene-YPIP275_RS08840;Dbxref=GenBank:WP_002210109.1;Name=WP_002210109.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874062.1;locus_tag=YPIP275_RS08840;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_002210109.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 113044 113508 . - . ID=gene-YPIP275_RS08845;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=YPIP275_RS08845;old_locus_tag=YPIP275_0283 NZ_AAOS02000008.1 Protein Homology CDS 113044 113508 . - 0 ID=cds-WP_002210110.1;Parent=gene-YPIP275_RS08845;Dbxref=GenBank:WP_002210110.1;Name=WP_002210110.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210110.1;locus_tag=YPIP275_RS08845;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_002210110.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 113520 114455 . - . ID=gene-YPIP275_RS08850;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=YPIP275_RS08850;old_locus_tag=YPIP275_0284 NZ_AAOS02000008.1 Protein Homology CDS 113520 114455 . - 0 ID=cds-WP_002210111.1;Parent=gene-YPIP275_RS08850;Dbxref=GenBank:WP_002210111.1;Name=WP_002210111.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210111.1;locus_tag=YPIP275_RS08850;product=aspartate carbamoyltransferase;protein_id=WP_002210111.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 114793 115065 . - . ID=gene-YPIP275_RS08855;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=YPIP275_RS08855;old_locus_tag=YPIP275_0285 NZ_AAOS02000008.1 Protein Homology CDS 114793 115065 . - 0 ID=cds-WP_002210112.1;Parent=gene-YPIP275_RS08855;Dbxref=GenBank:WP_002210112.1;Name=WP_002210112.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=YPIP275_RS08855;product=PTS phosphocarrier protein NPr;protein_id=WP_002210112.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 115062 115916 . - . ID=gene-YPIP275_RS08860;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=YPIP275_RS08860;old_locus_tag=YPIP275_0286 NZ_AAOS02000008.1 Protein Homology CDS 115062 115916 . - 0 ID=cds-WP_002210113.1;Parent=gene-YPIP275_RS08860;Dbxref=GenBank:WP_002210113.1;Name=WP_002210113.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147065.1;locus_tag=YPIP275_RS08860;product=RNase adapter RapZ;protein_id=WP_002210113.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 116222 116704 . - . ID=gene-YPIP275_RS08865;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=YPIP275_RS08865;old_locus_tag=YPIP275_0287 NZ_AAOS02000008.1 Protein Homology CDS 116222 116704 . - 0 ID=cds-WP_002213952.1;Parent=gene-YPIP275_RS08865;Dbxref=GenBank:WP_002213952.1;Name=WP_002213952.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213952.1;locus_tag=YPIP275_RS08865;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_002213952.1;transl_table=11 NZ_AAOS02000008.1 RefSeq pseudogene 116822 117109 . - . ID=gene-YPIP275_RS08870;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=pseudogene;locus_tag=YPIP275_RS08870;pseudo=true NZ_AAOS02000008.1 Protein Homology CDS 116822 117109 . - 0 ID=cds-YPIP275_RS08870;Parent=gene-YPIP275_RS08870;Note=internal stop;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=YPIP275_RS08870;product=ribosome hibernation promoting factor;pseudo=true;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 117133 118566 . - . ID=gene-YPIP275_RS08875;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=YPIP275_RS08875;old_locus_tag=YPIP275_0289 NZ_AAOS02000008.1 Protein Homology CDS 117133 118566 . - 0 ID=cds-WP_002210115.1;Parent=gene-YPIP275_RS08875;Dbxref=GenBank:WP_002210115.1;Name=WP_002210115.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312108.1;locus_tag=YPIP275_RS08875;product=RNA polymerase factor sigma-54;protein_id=WP_002210115.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 118628 119353 . - . ID=gene-YPIP275_RS08880;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=YPIP275_RS08880;old_locus_tag=YPIP275_0290 NZ_AAOS02000008.1 Protein Homology CDS 118628 119353 . - 0 ID=cds-WP_002210116.1;Parent=gene-YPIP275_RS08880;Dbxref=GenBank:WP_002210116.1;Name=WP_002210116.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229050.1;locus_tag=YPIP275_RS08880;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_002210116.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 119360 119905 . - . ID=gene-YPIP275_RS08885;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08885;old_locus_tag=YPIP275_0291 NZ_AAOS02000008.1 Protein Homology CDS 119360 119905 . - 0 ID=cds-WP_002210117.1;Parent=gene-YPIP275_RS08885;Dbxref=GenBank:WP_002210117.1;Name=WP_002210117.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303488.1;locus_tag=YPIP275_RS08885;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_002210117.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 119889 120452 . - . ID=gene-YPIP275_RS08890;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=YPIP275_RS08890;old_locus_tag=YPIP275_0292 NZ_AAOS02000008.1 Protein Homology CDS 119889 120452 . - 0 ID=cds-WP_002218352.1;Parent=gene-YPIP275_RS08890;Dbxref=GenBank:WP_002218352.1;Name=WP_002218352.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193147.1;locus_tag=YPIP275_RS08890;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_002218352.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 120449 121012 . - . ID=gene-YPIP275_RS08895;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=YPIP275_RS08895;old_locus_tag=YPIP275_0293 NZ_AAOS02000008.1 Protein Homology CDS 120449 121012 . - 0 ID=cds-WP_002228203.1;Parent=gene-YPIP275_RS08895;Dbxref=GenBank:WP_002228203.1;Name=WP_002228203.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004722388.1;locus_tag=YPIP275_RS08895;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_002228203.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 121261 122247 . - . ID=gene-YPIP275_RS08900;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=YPIP275_RS08900;old_locus_tag=YPIP275_0294 NZ_AAOS02000008.1 Protein Homology CDS 121261 122247 . - 0 ID=cds-WP_002210119.1;Parent=gene-YPIP275_RS08900;Dbxref=GenBank:WP_002210119.1;Name=WP_002210119.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210119.1;locus_tag=YPIP275_RS08900;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_002210119.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 122358 123332 . - . ID=gene-YPIP275_RS08905;Name=YPIP275_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08905;old_locus_tag=YPIP275_0295 NZ_AAOS02000008.1 Protein Homology CDS 122358 123332 . - 0 ID=cds-WP_002210120.1;Parent=gene-YPIP275_RS08905;Dbxref=GenBank:WP_002210120.1;Name=WP_002210120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210120.1;locus_tag=YPIP275_RS08905;product=calcium/sodium antiporter;protein_id=WP_002210120.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 123597 124415 . + . ID=gene-YPIP275_RS08910;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=YPIP275_RS08910;old_locus_tag=YPIP275_0296 NZ_AAOS02000008.1 Protein Homology CDS 123597 124415 . + 0 ID=cds-WP_002210121.1;Parent=gene-YPIP275_RS08910;Dbxref=GenBank:WP_002210121.1;Name=WP_002210121.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210121.1;locus_tag=YPIP275_RS08910;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_002210121.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 124633 125415 . + . ID=gene-YPIP275_RS08915;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=YPIP275_RS08915;old_locus_tag=YPIP275_0297 NZ_AAOS02000008.1 Protein Homology CDS 124633 125415 . + 0 ID=cds-WP_002210122.1;Parent=gene-YPIP275_RS08915;Dbxref=GenBank:WP_002210122.1;Name=WP_002210122.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650484.1;locus_tag=YPIP275_RS08915;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_002210122.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 125420 125977 . + . ID=gene-YPIP275_RS08920;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=YPIP275_RS08920;old_locus_tag=YPIP275_0298 NZ_AAOS02000008.1 Protein Homology CDS 125420 125977 . + 0 ID=cds-WP_002210123.1;Parent=gene-YPIP275_RS08920;Dbxref=GenBank:WP_002210123.1;Name=WP_002210123.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016595794.1;locus_tag=YPIP275_RS08920;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_002210123.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 125990 126613 . + . ID=gene-YPIP275_RS08925;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=YPIP275_RS08925;old_locus_tag=YPIP275_0299 NZ_AAOS02000008.1 Protein Homology CDS 125990 126613 . + 0 ID=cds-WP_002210124.1;Parent=gene-YPIP275_RS08925;Dbxref=GenBank:WP_002210124.1;Name=WP_002210124.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210124.1;locus_tag=YPIP275_RS08925;product=phospholipid-binding protein MlaC;protein_id=WP_002210124.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 126649 126951 . + . ID=gene-YPIP275_RS08930;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=YPIP275_RS08930;old_locus_tag=YPIP275_0300 NZ_AAOS02000008.1 Protein Homology CDS 126649 126951 . + 0 ID=cds-WP_002210125.1;Parent=gene-YPIP275_RS08930;Dbxref=GenBank:WP_002210125.1;Name=WP_002210125.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210125.1;locus_tag=YPIP275_RS08930;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_002210125.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 127098 127352 . + . ID=gene-YPIP275_RS08935;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=YPIP275_RS08935;old_locus_tag=YPIP275_0301 NZ_AAOS02000008.1 Protein Homology CDS 127098 127352 . + 0 ID=cds-WP_002210126.1;Parent=gene-YPIP275_RS08935;Dbxref=GenBank:WP_002210126.1;Name=WP_002210126.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004701358.1;locus_tag=YPIP275_RS08935;product=BolA family iron metabolism protein IbaG;protein_id=WP_002210126.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 127506 128768 . + . ID=gene-YPIP275_RS08940;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08940;old_locus_tag=YPIP275_0302 NZ_AAOS02000008.1 Protein Homology CDS 127506 128768 . + 0 ID=cds-WP_002210127.1;Parent=gene-YPIP275_RS08940;Dbxref=GenBank:WP_002210127.1;Name=WP_002210127.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210127.1;locus_tag=YPIP275_RS08940;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_002210127.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 128949 130037 . - . ID=gene-YPIP275_RS08945;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=YPIP275_RS08945;old_locus_tag=YPIP275_0303 NZ_AAOS02000008.1 Protein Homology CDS 128949 130037 . - 0 ID=cds-WP_002210128.1;Parent=gene-YPIP275_RS08945;Dbxref=GenBank:WP_002210128.1;Name=WP_002210128.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210128.1;locus_tag=YPIP275_RS08945;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_002210128.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 130263 130721 . + . ID=gene-YPIP275_RS08950;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08950;old_locus_tag=YPIP275_0304 NZ_AAOS02000008.1 Protein Homology CDS 130263 130721 . + 0 ID=cds-WP_002213775.1-27;Parent=gene-YPIP275_RS08950;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS08950;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 130838 132211 . - . ID=gene-YPIP275_RS08955;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS08955;old_locus_tag=YPIP275_0305 NZ_AAOS02000008.1 Protein Homology CDS 130838 132211 . - 0 ID=cds-WP_002218066.1;Parent=gene-YPIP275_RS08955;Dbxref=GenBank:WP_002218066.1;Name=WP_002218066.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218066.1;locus_tag=YPIP275_RS08955;product=serine endoprotease DegQ;protein_id=WP_002218066.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 132482 132886 . - . ID=gene-YPIP275_RS08960;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=YPIP275_RS08960;old_locus_tag=YPIP275_0306 NZ_AAOS02000008.1 Protein Homology CDS 132482 132886 . - 0 ID=cds-WP_002210130.1;Parent=gene-YPIP275_RS08960;Dbxref=GenBank:WP_002210130.1;Name=WP_002210130.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004722362.1;locus_tag=YPIP275_RS08960;product=Z-ring associated protein ZapG;protein_id=WP_002210130.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 133110 134237 . + . ID=gene-YPIP275_RS08965;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=YPIP275_RS08965;old_locus_tag=YPIP275_0307 NZ_AAOS02000008.1 Protein Homology CDS 133110 134237 . + 0 ID=cds-WP_002210131.1;Parent=gene-YPIP275_RS08965;Dbxref=GenBank:WP_002210131.1;Name=WP_002210131.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220218.1;locus_tag=YPIP275_RS08965;product=cell division protein ZapE;protein_id=WP_002210131.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 134551 134979 . + . ID=gene-YPIP275_RS08970;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=YPIP275_RS08970;old_locus_tag=YPIP275_0308 NZ_AAOS02000008.1 Protein Homology CDS 134551 134979 . + 0 ID=cds-WP_002210132.1;Parent=gene-YPIP275_RS08970;Dbxref=GenBank:WP_002210132.1;Name=WP_002210132.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=YPIP275_RS08970;product=50S ribosomal protein L13;protein_id=WP_002210132.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 134994 135386 . + . ID=gene-YPIP275_RS08975;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=YPIP275_RS08975;old_locus_tag=YPIP275_0310 NZ_AAOS02000008.1 Protein Homology CDS 134994 135386 . + 0 ID=cds-WP_002210133.1;Parent=gene-YPIP275_RS08975;Dbxref=GenBank:WP_002210133.1;Name=WP_002210133.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=YPIP275_RS08975;product=30S ribosomal protein S9;protein_id=WP_002210133.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 135383 135580 . - . ID=gene-YPIP275_RS08980;Name=YPIP275_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08980;old_locus_tag=YPIP275_0309 NZ_AAOS02000008.1 Protein Homology CDS 135383 135580 . - 0 ID=cds-WP_002230558.1;Parent=gene-YPIP275_RS08980;Dbxref=GenBank:WP_002230558.1;Name=WP_002230558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230558.1;locus_tag=YPIP275_RS08980;product=hypothetical protein;protein_id=WP_002230558.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 135760 136401 . + . ID=gene-YPIP275_RS08985;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08985;old_locus_tag=YPIP275_0311 NZ_AAOS02000008.1 Protein Homology CDS 135760 136401 . + 0 ID=cds-WP_002210135.1;Parent=gene-YPIP275_RS08985;Dbxref=GenBank:WP_002210135.1;Name=WP_002210135.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210135.1;locus_tag=YPIP275_RS08985;product=stringent starvation protein SspA;protein_id=WP_002210135.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 136407 136922 . + . ID=gene-YPIP275_RS08990;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=YPIP275_RS08990;old_locus_tag=YPIP275_0312 NZ_AAOS02000008.1 Protein Homology CDS 136407 136922 . + 0 ID=cds-WP_002216203.1;Parent=gene-YPIP275_RS08990;Dbxref=GenBank:WP_002216203.1;Name=WP_002216203.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004701342.1;locus_tag=YPIP275_RS08990;product=ClpXP protease specificity-enhancing factor;protein_id=WP_002216203.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 137075 137560 . - . ID=gene-YPIP275_RS08995;Name=YPIP275_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08995;old_locus_tag=YPIP275_0313 NZ_AAOS02000008.1 Protein Homology CDS 137075 137560 . - 0 ID=cds-WP_002210137.1;Parent=gene-YPIP275_RS08995;Dbxref=GenBank:WP_002210137.1;Name=WP_002210137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224291.1;locus_tag=YPIP275_RS08995;product=hypothetical protein;protein_id=WP_002210137.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 138001 139419 . - . ID=gene-YPIP275_RS09000;Name=YPIP275_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09000;old_locus_tag=YPIP275_0314 NZ_AAOS02000008.1 Protein Homology CDS 138001 139419 . - 0 ID=cds-WP_002210138.1;Parent=gene-YPIP275_RS09000;Dbxref=GenBank:WP_002210138.1;Name=WP_002210138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=YPIP275_RS09000;product=glutamate synthase small subunit;protein_id=WP_002210138.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 139429 143895 . - . ID=gene-YPIP275_RS09005;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=YPIP275_RS09005;old_locus_tag=YPIP275_0315 NZ_AAOS02000008.1 Protein Homology CDS 139429 143895 . - 0 ID=cds-WP_002229651.1;Parent=gene-YPIP275_RS09005;Dbxref=GenBank:WP_002229651.1;Name=WP_002229651.1;Ontology_term=GO:0008152,GO:0097054,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA,L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229064.1;locus_tag=YPIP275_RS09005;product=glutamate synthase large subunit;protein_id=WP_002229651.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 144718 145641 . + . ID=gene-YPIP275_RS09010;Name=mnmL;gbkey=Gene;gene=mnmL;gene_biotype=protein_coding;gene_synonym=ytqA;locus_tag=YPIP275_RS09010;old_locus_tag=YPIP275_0316 NZ_AAOS02000008.1 Protein Homology CDS 144718 145641 . + 0 ID=cds-WP_002210140.1;Parent=gene-YPIP275_RS09010;Dbxref=GenBank:WP_002210140.1;Name=WP_002210140.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0006400,GO:0051536,GO:1904047;gbkey=CDS;gene=mnmL;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210140.1;locus_tag=YPIP275_RS09010;product=tRNA modification radical SAM protein MnmL/YtqA;protein_id=WP_002210140.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 145905 148241 . + . ID=gene-YPIP275_RS09020;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=YPIP275_RS09020;old_locus_tag=YPIP275_0318 NZ_AAOS02000008.1 Protein Homology CDS 145905 148241 . + 0 ID=cds-WP_002210142.1;Parent=gene-YPIP275_RS09020;Dbxref=GenBank:WP_002210142.1;Name=WP_002210142.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210142.1;locus_tag=YPIP275_RS09020;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_002210142.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 148483 149136 . + . ID=gene-YPIP275_RS09030;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=YPIP275_RS09030;old_locus_tag=YPIP275_0319 NZ_AAOS02000008.1 Protein Homology CDS 148483 149136 . + 0 ID=cds-WP_002210143.1;Parent=gene-YPIP275_RS09030;Dbxref=GenBank:WP_002210143.1;Name=WP_002210143.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210143.1;locus_tag=YPIP275_RS09030;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_002210143.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 149133 149858 . + . ID=gene-YPIP275_RS09035;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=YPIP275_RS09035;old_locus_tag=YPIP275_0320 NZ_AAOS02000008.1 Protein Homology CDS 149133 149858 . + 0 ID=cds-WP_002210144.1;Parent=gene-YPIP275_RS09035;Dbxref=GenBank:WP_002210144.1;Name=WP_002210144.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303494.1;locus_tag=YPIP275_RS09035;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_002210144.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 150065 150640 . - . ID=gene-YPIP275_RS09040;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=YPIP275_RS09040;old_locus_tag=YPIP275_0321 NZ_AAOS02000008.1 Protein Homology CDS 150065 150640 . - 0 ID=cds-WP_002210145.1;Parent=gene-YPIP275_RS09040;Dbxref=GenBank:WP_002210145.1;Name=WP_002210145.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104422.1;locus_tag=YPIP275_RS09040;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_002210145.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 150651 151241 . - . ID=gene-YPIP275_RS09045;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS09045;old_locus_tag=YPIP275_0322 NZ_AAOS02000008.1 Protein Homology CDS 150651 151241 . - 0 ID=cds-WP_002210146.1;Parent=gene-YPIP275_RS09045;Dbxref=GenBank:WP_002210146.1;Name=WP_002210146.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312057.1;locus_tag=YPIP275_RS09045;product=DnaA initiator-associating protein DiaA;protein_id=WP_002210146.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 151512 151865 . - . ID=gene-YPIP275_RS09050;Name=YPIP275_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09050;old_locus_tag=YPIP275_0323 NZ_AAOS02000008.1 Protein Homology CDS 151512 151865 . - 0 ID=cds-WP_002210147.1;Parent=gene-YPIP275_RS09050;Dbxref=GenBank:WP_002210147.1;Name=WP_002210147.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210147.1;locus_tag=YPIP275_RS09050;product=YraN family protein;protein_id=WP_002210147.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 151949 153922 . - . ID=gene-YPIP275_RS09055;Name=YPIP275_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09055;old_locus_tag=YPIP275_0324 NZ_AAOS02000008.1 Protein Homology CDS 151949 153922 . - 0 ID=cds-WP_002228200.1;Parent=gene-YPIP275_RS09055;Dbxref=GenBank:WP_002228200.1;Name=WP_002228200.1;Ontology_term=GO:0008360,GO:0009252,GO:0004553,GO:0019899,GO:0030234;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,enzyme binding|0019899||IEA,enzyme regulator activity|0030234||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193138.1;locus_tag=YPIP275_RS09055;product=penicillin-binding protein activator;protein_id=WP_002228200.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 153985 154884 . + . ID=gene-YPIP275_RS09060;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=YPIP275_RS09060;old_locus_tag=YPIP275_0325 NZ_AAOS02000008.1 Protein Homology CDS 153985 154884 . + 0 ID=cds-WP_002210149.1;Parent=gene-YPIP275_RS09060;Dbxref=GenBank:WP_002210149.1;Name=WP_002210149.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210149.1;locus_tag=YPIP275_RS09060;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_002210149.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 154904 155282 . + . ID=gene-YPIP275_RS26290;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=YPIP275_RS26290 NZ_AAOS02000008.1 cmsearch RNase_P_RNA 154904 155282 . + . ID=rna-YPIP275_RS26290;Parent=gene-YPIP275_RS26290;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS26290;product=RNase P RNA component class A NZ_AAOS02000008.1 cmsearch exon 154904 155282 . + . ID=exon-YPIP275_RS26290-1;Parent=rna-YPIP275_RS26290;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS26290;product=RNase P RNA component class A NZ_AAOS02000008.1 RefSeq gene 155821 156525 . - . ID=gene-YPIP275_RS09065;Name=YPIP275_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09065;old_locus_tag=YPIP275_0326 NZ_AAOS02000008.1 Protein Homology CDS 155821 156525 . - 0 ID=cds-WP_002210150.1;Parent=gene-YPIP275_RS09065;Dbxref=GenBank:WP_002210150.1;Name=WP_002210150.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585680.1;locus_tag=YPIP275_RS09065;product=pirin family protein;protein_id=WP_002210150.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 156787 157680 . + . ID=gene-YPIP275_RS09070;Name=YPIP275_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09070;old_locus_tag=YPIP275_0327 NZ_AAOS02000008.1 Protein Homology CDS 156787 157680 . + 0 ID=cds-WP_002210151.1;Parent=gene-YPIP275_RS09070;Dbxref=GenBank:WP_002210151.1;Name=WP_002210151.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193136.1;locus_tag=YPIP275_RS09070;product=LysR family transcriptional regulator;protein_id=WP_002210151.1;transl_table=11 NZ_AAOS02000008.1 RefSeq pseudogene 157811 158694 . - . ID=gene-YPIP275_RS09075;Name=YPIP275_RS09075;end_range=158694,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS09075;old_locus_tag=YPIP275_0328;partial=true;pseudo=true NZ_AAOS02000008.1 Protein Homology CDS 157811 158694 . - 0 ID=cds-YPIP275_RS09075;Parent=gene-YPIP275_RS09075;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004364,GO:0016491;end_range=158694,.;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303497.1;locus_tag=YPIP275_RS09075;partial=true;product=glutathione S-transferase family protein;pseudo=true;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 158761 159543 . - . ID=gene-YPIP275_RS09080;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS09080;old_locus_tag=YPIP275_0329 NZ_AAOS02000008.1 Protein Homology CDS 158761 159543 . - 0 ID=cds-WP_001317493.1-35;Parent=gene-YPIP275_RS09080;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS09080;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 159540 160562 . - . ID=gene-YPIP275_RS09085;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS09085;old_locus_tag=YPIP275_0330 NZ_AAOS02000008.1 Protein Homology CDS 159540 160562 . - 0 ID=cds-WP_000255944.1-29;Parent=gene-YPIP275_RS09085;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS09085;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 160619 161320 . + . ID=gene-YPIP275_RS09090;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=YPIP275_RS09090;old_locus_tag=YPIP275_0331 NZ_AAOS02000008.1 Protein Homology CDS 160619 161320 . + 0 ID=cds-WP_002210152.1;Parent=gene-YPIP275_RS09090;Dbxref=GenBank:WP_002210152.1;Name=WP_002210152.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210152.1;locus_tag=YPIP275_RS09090;product=esterase;protein_id=WP_002210152.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 161395 161673 . + . ID=gene-YPIP275_RS09095;Name=YPIP275_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09095 NZ_AAOS02000008.1 Protein Homology CDS 161395 161673 . + 0 ID=cds-WP_002228199.1;Parent=gene-YPIP275_RS09095;Dbxref=GenBank:WP_002228199.1;Name=WP_002228199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191619.1;locus_tag=YPIP275_RS09095;product=hypothetical protein;protein_id=WP_002228199.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 161687 162079 . + . ID=gene-YPIP275_RS09100;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=YPIP275_RS09100;old_locus_tag=YPIP275_0332 NZ_AAOS02000008.1 Protein Homology CDS 161687 162079 . + 0 ID=cds-WP_002210153.1;Parent=gene-YPIP275_RS09100;Dbxref=GenBank:WP_002210153.1;Name=WP_002210153.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=YPIP275_RS09100;product=30S ribosomal protein S6;protein_id=WP_002210153.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 162085 162405 . + . ID=gene-YPIP275_RS09105;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=YPIP275_RS09105;old_locus_tag=YPIP275_0333 NZ_AAOS02000008.1 Protein Homology CDS 162085 162405 . + 0 ID=cds-WP_002210154.1;Parent=gene-YPIP275_RS09105;Dbxref=GenBank:WP_002210154.1;Name=WP_002210154.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009111556.1;locus_tag=YPIP275_RS09105;product=primosomal replication protein N;protein_id=WP_002210154.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 162410 162637 . + . ID=gene-YPIP275_RS09110;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=YPIP275_RS09110;old_locus_tag=YPIP275_0334 NZ_AAOS02000008.1 Protein Homology CDS 162410 162637 . + 0 ID=cds-WP_002210155.1;Parent=gene-YPIP275_RS09110;Dbxref=GenBank:WP_002210155.1;Name=WP_002210155.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=YPIP275_RS09110;product=30S ribosomal protein S18;protein_id=WP_002210155.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 162677 163129 . + . ID=gene-YPIP275_RS09115;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=YPIP275_RS09115;old_locus_tag=YPIP275_0335 NZ_AAOS02000008.1 Protein Homology CDS 162677 163129 . + 0 ID=cds-WP_002210156.1;Parent=gene-YPIP275_RS09115;Dbxref=GenBank:WP_002210156.1;Name=WP_002210156.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699845.1;locus_tag=YPIP275_RS09115;product=50S ribosomal protein L9;protein_id=WP_002210156.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 163325 163783 . + . ID=gene-YPIP275_RS09125;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS09125;old_locus_tag=YPIP275_0336 NZ_AAOS02000008.1 Protein Homology CDS 163325 163783 . + 0 ID=cds-WP_002213775.1-28;Parent=gene-YPIP275_RS09125;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS09125;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 163905 164360 . - . ID=gene-YPIP275_RS09130;Name=YPIP275_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09130;old_locus_tag=YPIP275_0337 NZ_AAOS02000008.1 Protein Homology CDS 163905 164360 . - 0 ID=cds-WP_002210157.1;Parent=gene-YPIP275_RS09130;Dbxref=GenBank:WP_002210157.1;Name=WP_002210157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210157.1;locus_tag=YPIP275_RS09130;product=DUF3757 domain-containing protein;protein_id=WP_002210157.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 164500 165240 . - . ID=gene-YPIP275_RS09135;Name=YPIP275_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09135;old_locus_tag=YPIP275_0338 NZ_AAOS02000008.1 Protein Homology CDS 164500 165240 . - 0 ID=cds-WP_002210158.1;Parent=gene-YPIP275_RS09135;Dbxref=GenBank:WP_002210158.1;Name=WP_002210158.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002396228.1;locus_tag=YPIP275_RS09135;product=LysM-like peptidoglycan-binding domain-containing protein;protein_id=WP_002210158.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 165583 166203 . + . ID=gene-YPIP275_RS09140;Name=bamJ;gbkey=Gene;gene=bamJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS09140;old_locus_tag=YPIP275_0339 NZ_AAOS02000008.1 Protein Homology CDS 165583 166203 . + 0 ID=cds-WP_002228198.1;Parent=gene-YPIP275_RS09140;Dbxref=GenBank:WP_002228198.1;Name=WP_002228198.1;gbkey=CDS;gene=bamJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=YPIP275_RS09140;product=BamJ family beta-barrel-assembly machinery protein;protein_id=WP_002228198.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 166301 166966 . - . ID=gene-YPIP275_RS09145;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=YPIP275_RS09145;old_locus_tag=YPIP275_0340 NZ_AAOS02000008.1 Protein Homology CDS 166301 166966 . - 0 ID=cds-WP_002210159.1;Parent=gene-YPIP275_RS09145;Dbxref=GenBank:WP_002210159.1;Name=WP_002210159.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191621.1;locus_tag=YPIP275_RS09145;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_002210159.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 167121 169091 . - . ID=gene-YPIP275_RS09150;Name=YPIP275_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09150;old_locus_tag=YPIP275_0341 NZ_AAOS02000008.1 Protein Homology CDS 167121 169091 . - 0 ID=cds-WP_002210160.1;Parent=gene-YPIP275_RS09150;Dbxref=GenBank:WP_002210160.1;Name=WP_002210160.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191622.1;locus_tag=YPIP275_RS09150;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_002210160.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 169526 170266 . + . ID=gene-YPIP275_RS09155;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS09155;old_locus_tag=YPIP275_0342 NZ_AAOS02000008.1 Protein Homology CDS 169526 170266 . + 0 ID=cds-WP_002220539.1;Parent=gene-YPIP275_RS09155;Dbxref=GenBank:WP_002220539.1;Name=WP_002220539.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=YPIP275_RS09155;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_002220539.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 170269 170832 . - . ID=gene-YPIP275_RS09160;Name=YPIP275_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09160;old_locus_tag=YPIP275_0343 NZ_AAOS02000008.1 Protein Homology CDS 170269 170832 . - 0 ID=cds-WP_002210162.1;Parent=gene-YPIP275_RS09160;Dbxref=GenBank:WP_002210162.1;Name=WP_002210162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223134.1;locus_tag=YPIP275_RS09160;product=YtfJ family protein;protein_id=WP_002210162.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 171168 171380 . + . ID=gene-YPIP275_RS09165;Name=YPIP275_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09165;old_locus_tag=YPIP275_0344 NZ_AAOS02000008.1 Protein Homology CDS 171168 171380 . + 0 ID=cds-WP_002210163.1;Parent=gene-YPIP275_RS09165;Dbxref=GenBank:WP_002210163.1;Name=WP_002210163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210163.1;locus_tag=YPIP275_RS09165;product=DUF1107 domain-containing protein;protein_id=WP_002210163.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 171488 172819 . - . ID=gene-YPIP275_RS09170;Name=paeA;gbkey=Gene;gene=paeA;gene_biotype=protein_coding;gene_synonym=ytfL;locus_tag=YPIP275_RS09170;old_locus_tag=YPIP275_0345 NZ_AAOS02000008.1 Protein Homology CDS 171488 172819 . - 0 ID=cds-WP_002210164.1;Parent=gene-YPIP275_RS09170;Dbxref=GenBank:WP_002210164.1;Name=WP_002210164.1;Ontology_term=GO:0050660;gbkey=CDS;gene=paeA;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012230150.1;locus_tag=YPIP275_RS09170;product=polyamine export protein PaeA;protein_id=WP_002210164.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 173097 173735 . - . ID=gene-YPIP275_RS09175;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=YPIP275_RS09175;old_locus_tag=YPIP275_0346 NZ_AAOS02000008.1 Protein Homology CDS 173097 173735 . - 0 ID=cds-WP_002210165.1;Parent=gene-YPIP275_RS09175;Dbxref=GenBank:WP_002210165.1;Name=WP_002210165.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210165.1;locus_tag=YPIP275_RS09175;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_002210165.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 174010 175746 . + . ID=gene-YPIP275_RS09180;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=YPIP275_RS09180;old_locus_tag=YPIP275_0347 NZ_AAOS02000008.1 Protein Homology CDS 174010 175746 . + 0 ID=cds-WP_002210166.1;Parent=gene-YPIP275_RS09180;Dbxref=GenBank:WP_002210166.1;Name=WP_002210166.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191624.1;locus_tag=YPIP275_RS09180;product=autotransporter assembly complex protein TamA;protein_id=WP_002210166.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 175743 179660 . + . ID=gene-YPIP275_RS09185;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=YPIP275_RS09185;old_locus_tag=YPIP275_0348 NZ_AAOS02000008.1 Protein Homology CDS 175743 179660 . + 0 ID=cds-WP_002210167.1;Parent=gene-YPIP275_RS09185;Dbxref=GenBank:WP_002210167.1;Name=WP_002210167.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210167.1;locus_tag=YPIP275_RS09185;product=autotransporter assembly complex protein TamB;protein_id=WP_002210167.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 179663 180019 . + . ID=gene-YPIP275_RS09190;Name=YPIP275_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09190;old_locus_tag=YPIP275_0349 NZ_AAOS02000008.1 Protein Homology CDS 179663 180019 . + 0 ID=cds-WP_002210168.1;Parent=gene-YPIP275_RS09190;Dbxref=GenBank:WP_002210168.1;Name=WP_002210168.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210168.1;locus_tag=YPIP275_RS09190;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_002210168.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 180137 180664 . - . ID=gene-YPIP275_RS09195;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=YPIP275_RS09195;old_locus_tag=YPIP275_0350 NZ_AAOS02000008.1 Protein Homology CDS 180137 180664 . - 0 ID=cds-WP_002210169.1;Parent=gene-YPIP275_RS09195;Dbxref=GenBank:WP_002210169.1;Name=WP_002210169.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134479.1;locus_tag=YPIP275_RS09195;product=inorganic diphosphatase;protein_id=WP_002210169.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 180864 181877 . - . ID=gene-YPIP275_RS09200;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=YPIP275_RS09200;old_locus_tag=YPIP275_0351 NZ_AAOS02000008.1 Protein Homology CDS 180864 181877 . - 0 ID=cds-WP_002216946.1;Parent=gene-YPIP275_RS09200;Dbxref=GenBank:WP_002216946.1;Name=WP_002216946.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875434.1;locus_tag=YPIP275_RS09200;product=class 1 fructose-bisphosphatase;protein_id=WP_002216946.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 182048 183430 . + . ID=gene-YPIP275_RS09205;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=YPIP275_RS09205;old_locus_tag=YPIP275_0352 NZ_AAOS02000008.1 Protein Homology CDS 182048 183430 . + 0 ID=cds-WP_002210171.1;Parent=gene-YPIP275_RS09205;Dbxref=GenBank:WP_002210171.1;Name=WP_002210171.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012230153.1;locus_tag=YPIP275_RS09205;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_002210171.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 183726 183989 . - . ID=gene-YPIP275_RS09215;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=YPIP275_RS09215;old_locus_tag=YPIP275_0353 NZ_AAOS02000008.1 Protein Homology CDS 183726 183989 . - 0 ID=cds-WP_002210172.1;Parent=gene-YPIP275_RS09215;Dbxref=GenBank:WP_002210172.1;Name=WP_002210172.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210172.1;locus_tag=YPIP275_RS09215;product=peroxide/acid stress response protein YhcN;protein_id=WP_002210172.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 184378 184848 . - . ID=gene-YPIP275_RS09220;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=YPIP275_RS09220;old_locus_tag=YPIP275_0354 NZ_AAOS02000008.1 Protein Homology CDS 184378 184848 . - 0 ID=cds-WP_002210173.1;Parent=gene-YPIP275_RS09220;Dbxref=GenBank:WP_002210173.1;Name=WP_002210173.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210173.1;locus_tag=YPIP275_RS09220;product=transcriptional regulator ArgR;protein_id=WP_002210173.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 185312 186250 . + . ID=gene-YPIP275_RS09225;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=YPIP275_RS09225;old_locus_tag=YPIP275_0355 NZ_AAOS02000008.1 Protein Homology CDS 185312 186250 . + 0 ID=cds-WP_002210174.1;Parent=gene-YPIP275_RS09225;Dbxref=GenBank:WP_002210174.1;Name=WP_002210174.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=YPIP275_RS09225;product=malate dehydrogenase;protein_id=WP_002210174.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 186684 186959 . - . ID=gene-YPIP275_RS09230;Name=YPIP275_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09230;old_locus_tag=YPIP275_0356 NZ_AAOS02000008.1 Protein Homology CDS 186684 186959 . - 0 ID=cds-WP_002210175.1;Parent=gene-YPIP275_RS09230;Dbxref=GenBank:WP_002210175.1;Name=WP_002210175.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004723007.1;locus_tag=YPIP275_RS09230;product=helix-turn-helix domain-containing protein;protein_id=WP_002210175.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 187143 187490 . + . ID=gene-YPIP275_RS09235;Name=YPIP275_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09235;old_locus_tag=YPIP275_0357 NZ_AAOS02000008.1 Protein Homology CDS 187143 187490 . + 0 ID=cds-WP_002210176.1;Parent=gene-YPIP275_RS09235;Dbxref=GenBank:WP_002210176.1;Name=WP_002210176.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210176.1;locus_tag=YPIP275_RS09235;product=DNA-binding protein;protein_id=WP_002210176.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 187587 188558 . - . ID=gene-YPIP275_RS09240;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=YPIP275_RS09240;old_locus_tag=YPIP275_0358 NZ_AAOS02000008.1 Protein Homology CDS 187587 188558 . - 0 ID=cds-WP_002210177.1;Parent=gene-YPIP275_RS09240;Dbxref=GenBank:WP_002210177.1;Name=WP_002210177.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191628.1;locus_tag=YPIP275_RS09240;product=octaprenyl diphosphate synthase;protein_id=WP_002210177.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 188818 189129 . + . ID=gene-YPIP275_RS09245;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=YPIP275_RS09245;old_locus_tag=YPIP275_0359 NZ_AAOS02000008.1 Protein Homology CDS 188818 189129 . + 0 ID=cds-WP_002210178.1;Parent=gene-YPIP275_RS09245;Dbxref=GenBank:WP_002210178.1;Name=WP_002210178.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=YPIP275_RS09245;product=50S ribosomal protein L21;protein_id=WP_002210178.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 189149 189406 . + . ID=gene-YPIP275_RS09250;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=YPIP275_RS09250;old_locus_tag=YPIP275_0360 NZ_AAOS02000008.1 Protein Homology CDS 189149 189406 . + 0 ID=cds-WP_002210179.1;Parent=gene-YPIP275_RS09250;Dbxref=GenBank:WP_002210179.1;Name=WP_002210179.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=YPIP275_RS09250;product=50S ribosomal protein L27;protein_id=WP_002210179.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 189494 190480 . + . ID=gene-YPIP275_RS09255;Name=YPIP275_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS09255;old_locus_tag=YPIP275_0361 NZ_AAOS02000008.1 Protein Homology CDS 189494 190480 . + 0 ID=cds-WP_002210180.1;Parent=gene-YPIP275_RS09255;Dbxref=GenBank:WP_002210180.1;Name=WP_002210180.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210180.1;locus_tag=YPIP275_RS09255;product=DMT family transporter;protein_id=WP_002210180.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 190481 191653 . + . ID=gene-YPIP275_RS09260;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=YPIP275_RS09260;old_locus_tag=YPIP275_0362 NZ_AAOS02000008.1 Protein Homology CDS 190481 191653 . + 0 ID=cds-WP_002210181.1;Parent=gene-YPIP275_RS09260;Dbxref=GenBank:WP_002210181.1;Name=WP_002210181.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210181.1;locus_tag=YPIP275_RS09260;product=Obg family GTPase CgtA;protein_id=WP_002210181.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 191748 192815 . - . ID=gene-YPIP275_RS09265;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=YPIP275_RS09265;old_locus_tag=YPIP275_0363 NZ_AAOS02000008.1 Protein Homology CDS 191748 192815 . - 0 ID=cds-WP_002210182.1;Parent=gene-YPIP275_RS09265;Dbxref=GenBank:WP_002210182.1;Name=WP_002210182.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227439.1;locus_tag=YPIP275_RS09265;product=two-component system sensor histidine kinase PmrB;protein_id=WP_002210182.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 192812 193474 . - . ID=gene-YPIP275_RS09270;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=YPIP275_RS09270;old_locus_tag=YPIP275_0364 NZ_AAOS02000008.1 Protein Homology CDS 192812 193474 . - 0 ID=cds-WP_002210183.1;Parent=gene-YPIP275_RS09270;Dbxref=GenBank:WP_002210183.1;Name=WP_002210183.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210183.1;locus_tag=YPIP275_RS09270;product=two-component system response regulator PmrA;protein_id=WP_002210183.1;transl_table=11 NZ_AAOS02000008.1 RefSeq pseudogene 193480 194927 . - . ID=gene-YPIP275_RS09275;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=pseudogene;locus_tag=YPIP275_RS09275;old_locus_tag=YPIP275_0365;pseudo=true NZ_AAOS02000008.1 Protein Homology CDS 193480 194927 . - 0 ID=cds-YPIP275_RS09275;Parent=gene-YPIP275_RS09275;Note=frameshifted;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=YPIP275_RS09275;product=serine-type D-Ala-D-Ala carboxypeptidase;pseudo=true;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 195185 195661 . + . ID=gene-YPIP275_RS09280;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=YPIP275_RS09280;old_locus_tag=YPIP275_0366 NZ_AAOS02000008.1 Protein Homology CDS 195185 195661 . + 0 ID=cds-WP_002210184.1;Parent=gene-YPIP275_RS09280;Dbxref=GenBank:WP_002210184.1;Name=WP_002210184.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=YPIP275_RS09280;product=transcription elongation factor GreA;protein_id=WP_002210184.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 195789 196082 . - . ID=gene-YPIP275_RS09285;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=YPIP275_RS09285;old_locus_tag=YPIP275_0367 NZ_AAOS02000008.1 Protein Homology CDS 195789 196082 . - 0 ID=cds-WP_002210185.1;Parent=gene-YPIP275_RS09285;Dbxref=GenBank:WP_002210185.1;Name=WP_002210185.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210185.1;locus_tag=YPIP275_RS09285;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_002210185.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 196229 196858 . + . ID=gene-YPIP275_RS09290;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=YPIP275_RS09290;old_locus_tag=YPIP275_0368 NZ_AAOS02000008.1 Protein Homology CDS 196229 196858 . + 0 ID=cds-WP_002228196.1;Parent=gene-YPIP275_RS09290;Dbxref=GenBank:WP_002228196.1;Name=WP_002228196.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156285.1;locus_tag=YPIP275_RS09290;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_002228196.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 196915 198849 . + . ID=gene-YPIP275_RS09295;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=YPIP275_RS09295;old_locus_tag=YPIP275_0369 NZ_AAOS02000008.1 Protein Homology CDS 196915 198849 . + 0 ID=cds-WP_002228195.1;Parent=gene-YPIP275_RS09295;Dbxref=GenBank:WP_002228195.1;Name=WP_002228195.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229027.1;locus_tag=YPIP275_RS09295;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_002228195.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 198969 199802 . + . ID=gene-YPIP275_RS09300;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=YPIP275_RS09300;old_locus_tag=YPIP275_0370 NZ_AAOS02000008.1 Protein Homology CDS 198969 199802 . + 0 ID=cds-WP_002210188.1;Parent=gene-YPIP275_RS09300;Dbxref=GenBank:WP_002210188.1;Name=WP_002210188.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389228.1;locus_tag=YPIP275_RS09300;product=dihydropteroate synthase;protein_id=WP_002210188.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 199812 201152 . + . ID=gene-YPIP275_RS09305;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=YPIP275_RS09305;old_locus_tag=YPIP275_0371 NZ_AAOS02000008.1 Protein Homology CDS 199812 201152 . + 0 ID=cds-WP_002210189.1;Parent=gene-YPIP275_RS09305;Dbxref=GenBank:WP_002210189.1;Name=WP_002210189.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148609.1;locus_tag=YPIP275_RS09305;product=phosphoglucosamine mutase;protein_id=WP_002210189.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 201375 201710 . + . ID=gene-YPIP275_RS09310;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=YPIP275_RS09310;old_locus_tag=YPIP275_0372 NZ_AAOS02000008.1 Protein Homology CDS 201375 201710 . + 0 ID=cds-WP_002210190.1;Parent=gene-YPIP275_RS09310;Dbxref=GenBank:WP_002210190.1;Name=WP_002210190.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=YPIP275_RS09310;product=preprotein translocase subunit SecG;protein_id=WP_002210190.1;transl_table=11 NZ_AAOS02000008.1 RefSeq gene 201803 201889 . + . ID=gene-YPIP275_RS09315;Name=YPIP275_RS09315;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS09315;old_locus_tag=YPIP275_0373 NZ_AAOS02000008.1 tRNAscan-SE tRNA 201803 201889 . + . ID=rna-YPIP275_RS09315;Parent=gene-YPIP275_RS09315;anticodon=(pos:201837..201839);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS09315;product=tRNA-Leu NZ_AAOS02000008.1 tRNAscan-SE exon 201803 201889 . + . ID=exon-YPIP275_RS09315-1;Parent=rna-YPIP275_RS09315;anticodon=(pos:201837..201839);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS09315;product=tRNA-Leu NZ_AAOS02000008.1 RefSeq gene 201950 202026 . + . ID=gene-YPIP275_RS09320;Name=YPIP275_RS09320;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS09320;old_locus_tag=YPIP275_0374 NZ_AAOS02000008.1 tRNAscan-SE tRNA 201950 202026 . + . ID=rna-YPIP275_RS09320;Parent=gene-YPIP275_RS09320;anticodon=(pos:201984..201986);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS09320;product=tRNA-Met NZ_AAOS02000008.1 tRNAscan-SE exon 201950 202026 . + . ID=exon-YPIP275_RS09320-1;Parent=rna-YPIP275_RS09320;anticodon=(pos:201984..201986);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS09320;product=tRNA-Met ##sequence-region NZ_AAOS02000007.1 1 219376 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000007.1 RefSeq region 1 219376 . + . ID=NZ_AAOS02000007.1:1..219376;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000007.1 RefSeq gene 198 884 . + . ID=gene-YPIP275_RS07360;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=YPIP275_RS07360;old_locus_tag=YPIP275_4264 NZ_AAOS02000007.1 Protein Homology CDS 198 884 . + 0 ID=cds-WP_002209838.1;Parent=gene-YPIP275_RS07360;Dbxref=GenBank:WP_002209838.1;Name=WP_002209838.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165371.1;locus_tag=YPIP275_RS07360;product=DNA mismatch repair endonuclease MutH;protein_id=WP_002209838.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 1219 2259 . + . ID=gene-YPIP275_RS07365;Name=YPIP275_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07365;old_locus_tag=YPIP275_4265 NZ_AAOS02000007.1 Protein Homology CDS 1219 2259 . + 0 ID=cds-WP_002209839.1;Parent=gene-YPIP275_RS07365;Dbxref=GenBank:WP_002209839.1;Name=WP_002209839.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165364.1;locus_tag=YPIP275_RS07365;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_002209839.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 2636 2887 . - . ID=gene-YPIP275_RS07370;Name=YPIP275_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07370;old_locus_tag=YPIP275_4266 NZ_AAOS02000007.1 Protein Homology CDS 2636 2887 . - 0 ID=cds-WP_002209840.1;Parent=gene-YPIP275_RS07370;Dbxref=GenBank:WP_002209840.1;Name=WP_002209840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209840.1;locus_tag=YPIP275_RS07370;product=hypothetical protein;protein_id=WP_002209840.1;transl_table=11 NZ_AAOS02000007.1 RefSeq pseudogene 3080 3172 . + . ID=gene-YPIP275_RS28525;Name=YPIP275_RS28525;end_range=3172,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28525;partial=true;pseudo=true;start_range=.,3080 NZ_AAOS02000007.1 Protein Homology CDS 3080 3172 . + 0 ID=cds-YPIP275_RS28525;Parent=gene-YPIP275_RS28525;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3172,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414888.4;locus_tag=YPIP275_RS28525;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3080;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 3228 4448 . - . ID=gene-YPIP275_RS07380;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=YPIP275_RS07380;old_locus_tag=YPIP275_4268 NZ_AAOS02000007.1 Protein Homology CDS 3228 4448 . - 0 ID=cds-WP_002209842.1;Parent=gene-YPIP275_RS07380;Dbxref=GenBank:WP_002209842.1;Name=WP_002209842.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002371852.1;locus_tag=YPIP275_RS07380;product=lysophospholipid transporter LplT;protein_id=WP_002209842.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 4445 6601 . - . ID=gene-YPIP275_RS07385;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=YPIP275_RS07385;old_locus_tag=YPIP275_4269 NZ_AAOS02000007.1 Protein Homology CDS 4445 6601 . - 0 ID=cds-WP_002209843.1;Parent=gene-YPIP275_RS07385;Dbxref=GenBank:WP_002209843.1;Name=WP_002209843.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702578.1;locus_tag=YPIP275_RS07385;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_002209843.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 7050 9311 . - . ID=gene-YPIP275_RS07390;Name=YPIP275_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07390;old_locus_tag=YPIP275_4270 NZ_AAOS02000007.1 Protein Homology CDS 7050 9311 . - 0 ID=cds-WP_002209844.1;Parent=gene-YPIP275_RS07390;Dbxref=GenBank:WP_002209844.1;Name=WP_002209844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230169.1;locus_tag=YPIP275_RS07390;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_002209844.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 9621 10643 . + . ID=gene-YPIP275_RS07395;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=YPIP275_RS07395;old_locus_tag=YPIP275_4272 NZ_AAOS02000007.1 Protein Homology CDS 9621 10643 . + 0 ID=cds-WP_002209845.1;Parent=gene-YPIP275_RS07395;Dbxref=GenBank:WP_002209845.1;Name=WP_002209845.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209845.1;locus_tag=YPIP275_RS07395;product=HTH-type transcriptional regulator GalR;protein_id=WP_002209845.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 10640 11902 . - . ID=gene-YPIP275_RS07400;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=YPIP275_RS07400;old_locus_tag=YPIP275_4271 NZ_AAOS02000007.1 Protein Homology CDS 10640 11902 . - 0 ID=cds-WP_002209846.1;Parent=gene-YPIP275_RS07400;Dbxref=GenBank:WP_002209846.1;Name=WP_002209846.1;Ontology_term=GO:0009085,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303749.1;locus_tag=YPIP275_RS07400;product=diaminopimelate decarboxylase;protein_id=WP_002209846.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 12117 13058 . + . ID=gene-YPIP275_RS07405;Name=YPIP275_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07405;old_locus_tag=YPIP275_4274 NZ_AAOS02000007.1 Protein Homology CDS 12117 13058 . + 0 ID=cds-WP_002209847.1;Parent=gene-YPIP275_RS07405;Dbxref=GenBank:WP_002209847.1;Name=WP_002209847.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413873.1;locus_tag=YPIP275_RS07405;product=LysR family transcriptional regulator;protein_id=WP_002209847.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 13055 14215 . - . ID=gene-YPIP275_RS07410;Name=YPIP275_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07410;old_locus_tag=YPIP275_4273 NZ_AAOS02000007.1 Protein Homology CDS 13055 14215 . - 0 ID=cds-WP_002209848.1;Parent=gene-YPIP275_RS07410;Dbxref=GenBank:WP_002209848.1;Name=WP_002209848.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209848.1;locus_tag=YPIP275_RS07410;product=MFS transporter;protein_id=WP_002209848.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 14584 15492 . - . ID=gene-YPIP275_RS07415;Name=YPIP275_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07415;old_locus_tag=YPIP275_4275 NZ_AAOS02000007.1 Protein Homology CDS 14584 15492 . - 0 ID=cds-WP_002209849.1;Parent=gene-YPIP275_RS07415;Dbxref=GenBank:WP_002209849.1;Name=WP_002209849.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209849.1;locus_tag=YPIP275_RS07415;product=LysR family transcriptional regulator;protein_id=WP_002209849.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 15599 16486 . + . ID=gene-YPIP275_RS07420;Name=YPIP275_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07420;old_locus_tag=YPIP275_4276 NZ_AAOS02000007.1 Protein Homology CDS 15599 16486 . + 0 ID=cds-WP_002209850.1;Parent=gene-YPIP275_RS07420;Dbxref=GenBank:WP_002209850.1;Name=WP_002209850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082447.1;locus_tag=YPIP275_RS07420;product=MBL fold metallo-hydrolase;protein_id=WP_002209850.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 16599 17234 . + . ID=gene-YPIP275_RS07425;Name=YPIP275_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07425;old_locus_tag=YPIP275_4279 NZ_AAOS02000007.1 Protein Homology CDS 16599 17234 . + 0 ID=cds-WP_002209852.1;Parent=gene-YPIP275_RS07425;Dbxref=GenBank:WP_002209852.1;Name=WP_002209852.1;Ontology_term=GO:0016667;gbkey=CDS;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192881.1;locus_tag=YPIP275_RS07425;product=DsbA family protein;protein_id=WP_002209852.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 17220 18911 . - . ID=gene-YPIP275_RS07430;Name=YPIP275_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07430;old_locus_tag=YPIP275_4278 NZ_AAOS02000007.1 Protein Homology CDS 17220 18911 . - 0 ID=cds-WP_002209853.1;Parent=gene-YPIP275_RS07430;Dbxref=GenBank:WP_002209853.1;Name=WP_002209853.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906285.1;locus_tag=YPIP275_RS07430;product=methyl-accepting chemotaxis protein;protein_id=WP_002209853.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 19066 19467 . - . ID=gene-YPIP275_RS07435;Name=YPIP275_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07435 NZ_AAOS02000007.1 Protein Homology CDS 19066 19467 . - 0 ID=cds-WP_002214100.1;Parent=gene-YPIP275_RS07435;Dbxref=GenBank:WP_002214100.1;Name=WP_002214100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214100.1;locus_tag=YPIP275_RS07435;product=hypothetical protein;protein_id=WP_002214100.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 19464 20180 . - . ID=gene-YPIP275_RS07440;Name=YPIP275_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07440;old_locus_tag=YPIP275_4281 NZ_AAOS02000007.1 Protein Homology CDS 19464 20180 . - 0 ID=cds-WP_002214099.1;Parent=gene-YPIP275_RS07440;Dbxref=GenBank:WP_002214099.1;Name=WP_002214099.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214099.1;locus_tag=YPIP275_RS07440;product=winged helix-turn-helix domain-containing protein;protein_id=WP_002214099.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 20464 20769 . + . ID=gene-YPIP275_RS07445;Name=gspS;gbkey=Gene;gene=gspS;gene_biotype=protein_coding;locus_tag=YPIP275_RS07445;old_locus_tag=YPIP275_4283 NZ_AAOS02000007.1 Protein Homology CDS 20464 20769 . + 0 ID=cds-WP_002214097.1;Parent=gene-YPIP275_RS07445;Dbxref=GenBank:WP_002214097.1;Name=WP_002214097.1;Ontology_term=GO:0006886;gbkey=CDS;gene=gspS;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: protein motif:HMM:TIGR01004.2;locus_tag=YPIP275_RS07445;product=type II secretion system pilot lipoprotein GspS;protein_id=WP_002214097.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 20821 21660 . - . ID=gene-YPIP275_RS07450;Name=YPIP275_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07450;old_locus_tag=YPIP275_4284 NZ_AAOS02000007.1 Protein Homology CDS 20821 21660 . - 0 ID=cds-WP_002209856.1;Parent=gene-YPIP275_RS07450;Dbxref=GenBank:WP_002209856.1;Name=WP_002209856.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209856.1;locus_tag=YPIP275_RS07450;product=prepilin peptidase;protein_id=WP_002209856.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 21689 22138 . - . ID=gene-YPIP275_RS07455;Name=YPIP275_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07455 NZ_AAOS02000007.1 Protein Homology CDS 21689 22138 . - 0 ID=cds-WP_002226092.1;Parent=gene-YPIP275_RS07455;Dbxref=GenBank:WP_002226092.1;Name=WP_002226092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002226092.1;locus_tag=YPIP275_RS07455;product=hypothetical protein;protein_id=WP_002226092.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 22147 23337 . - . ID=gene-YPIP275_RS07460;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=YPIP275_RS07460;old_locus_tag=YPIP275_4286 NZ_AAOS02000007.1 Protein Homology CDS 22147 23337 . - 0 ID=cds-WP_002209858.1;Parent=gene-YPIP275_RS07460;Dbxref=GenBank:WP_002209858.1;Name=WP_002209858.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303742.1;locus_tag=YPIP275_RS07460;product=type II secretion system protein GspL;protein_id=WP_002209858.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 23321 24277 . - . ID=gene-YPIP275_RS07465;Name=YPIP275_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07465;old_locus_tag=YPIP275_4287 NZ_AAOS02000007.1 Protein Homology CDS 23321 24277 . - 0 ID=cds-WP_002214094.1;Parent=gene-YPIP275_RS07465;Dbxref=GenBank:WP_002214094.1;Name=WP_002214094.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303741.1;locus_tag=YPIP275_RS07465;product=type II secretion system minor pseudopilin;protein_id=WP_002214094.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 24286 24882 . - . ID=gene-YPIP275_RS07470;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS07470;old_locus_tag=YPIP275_4288 NZ_AAOS02000007.1 Protein Homology CDS 24286 24882 . - 0 ID=cds-WP_002209860.1;Parent=gene-YPIP275_RS07470;Dbxref=GenBank:WP_002209860.1;Name=WP_002209860.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspJ;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014462283.1;locus_tag=YPIP275_RS07470;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_002209860.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 24875 25264 . - . ID=gene-YPIP275_RS07475;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=YPIP275_RS07475;old_locus_tag=YPIP275_4289 NZ_AAOS02000007.1 Protein Homology CDS 24875 25264 . - 0 ID=cds-WP_308417975.1;Parent=gene-YPIP275_RS07475;Dbxref=GenBank:WP_308417975.1;Name=WP_308417975.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: protein motif:HMM:TIGR01707.1;locus_tag=YPIP275_RS07475;product=type II secretion system minor pseudopilin GspI;protein_id=WP_308417975.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 25257 25688 . - . ID=gene-YPIP275_RS07480;Name=YPIP275_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07480 NZ_AAOS02000007.1 Protein Homology CDS 25257 25688 . - 0 ID=cds-WP_002362851.1;Parent=gene-YPIP275_RS07480;Dbxref=GenBank:WP_002362851.1;Name=WP_002362851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002362851.1;locus_tag=YPIP275_RS07480;product=hypothetical protein;protein_id=WP_002362851.1;transl_table=11 NZ_AAOS02000007.1 RefSeq pseudogene 25737 25847 . - . ID=gene-YPIP275_RS28530;Name=YPIP275_RS28530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28530;partial=true;pseudo=true;start_range=.,25737 NZ_AAOS02000007.1 Protein Homology CDS 25737 25847 . - 0 ID=cds-YPIP275_RS28530;Parent=gene-YPIP275_RS28530;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019575.7;locus_tag=YPIP275_RS28530;partial=true;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;pseudo=true;start_range=.,25737;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 25804 26241 . - . ID=gene-YPIP275_RS07485;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=YPIP275_RS07485;old_locus_tag=YPIP275_4290 NZ_AAOS02000007.1 Protein Homology CDS 25804 26241 . - 0 ID=cds-WP_002209862.1;Parent=gene-YPIP275_RS07485;Dbxref=GenBank:WP_002209862.1;Name=WP_002209862.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209862.1;locus_tag=YPIP275_RS07485;product=type II secretion system major pseudopilin GspG;protein_id=WP_002209862.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 26261 27307 . - . ID=gene-YPIP275_RS07490;Name=YPIP275_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07490;old_locus_tag=YPIP275_4291 NZ_AAOS02000007.1 Protein Homology CDS 26261 27307 . - 0 ID=cds-WP_002229014.1;Parent=gene-YPIP275_RS07490;Dbxref=GenBank:WP_002229014.1;Name=WP_002229014.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012694.7;locus_tag=YPIP275_RS07490;product=type II secretion system F family protein;protein_id=WP_002229014.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 27268 27462 . - . ID=gene-YPIP275_RS07495;Name=YPIP275_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07495 NZ_AAOS02000007.1 Protein Homology CDS 27268 27462 . - 0 ID=cds-WP_002214090.1;Parent=gene-YPIP275_RS07495;Dbxref=GenBank:WP_002214090.1;Name=WP_002214090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214090.1;locus_tag=YPIP275_RS07495;product=hypothetical protein;protein_id=WP_002214090.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 27449 28960 . - . ID=gene-YPIP275_RS07500;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=YPIP275_RS07500;old_locus_tag=YPIP275_4292 NZ_AAOS02000007.1 Protein Homology CDS 27449 28960 . - 0 ID=cds-WP_002209863.1;Parent=gene-YPIP275_RS07500;Dbxref=GenBank:WP_002209863.1;Name=WP_002209863.1;Ontology_term=GO:0015628,GO:0005524,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209863.1;locus_tag=YPIP275_RS07500;product=type II secretion system ATPase GspE;protein_id=WP_002209863.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 28957 30879 . - . ID=gene-YPIP275_RS07505;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=YPIP275_RS07505;old_locus_tag=YPIP275_4293 NZ_AAOS02000007.1 Protein Homology CDS 28957 30879 . - 0 ID=cds-WP_002209864.1;Parent=gene-YPIP275_RS07505;Dbxref=GenBank:WP_002209864.1;Name=WP_002209864.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209864.1;locus_tag=YPIP275_RS07505;product=type II secretion system secretin GspD;protein_id=WP_002209864.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 30960 31475 . - . ID=gene-YPIP275_RS07510;Name=YPIP275_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07510;old_locus_tag=YPIP275_4294 NZ_AAOS02000007.1 Protein Homology CDS 30960 31475 . - 0 ID=cds-WP_223871917.1;Parent=gene-YPIP275_RS07510;Dbxref=GenBank:WP_223871917.1;Name=WP_223871917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002429082.1;locus_tag=YPIP275_RS07510;product=type II secretion system protein N;protein_id=WP_223871917.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 31531 31947 . - . ID=gene-YPIP275_RS07515;Name=YPIP275_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07515;old_locus_tag=YPIP275_4295 NZ_AAOS02000007.1 Protein Homology CDS 31531 31947 . - 0 ID=cds-WP_002209866.1;Parent=gene-YPIP275_RS07515;Dbxref=GenBank:WP_002209866.1;Name=WP_002209866.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209866.1;locus_tag=YPIP275_RS07515;product=winged helix-turn-helix domain-containing protein;protein_id=WP_002209866.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 32690 33445 . - . ID=gene-YPIP275_RS07520;Name=YPIP275_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07520;old_locus_tag=YPIP275_4296 NZ_AAOS02000007.1 Protein Homology CDS 32690 33445 . - 0 ID=cds-WP_002220090.1;Parent=gene-YPIP275_RS07520;Dbxref=GenBank:WP_002220090.1;Name=WP_002220090.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220090.1;locus_tag=YPIP275_RS07520;product=carbonic anhydrase;protein_id=WP_002220090.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 33941 34129 . + . ID=gene-YPIP275_RS07525;Name=YPIP275_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07525;old_locus_tag=YPIP275_4297 NZ_AAOS02000007.1 Protein Homology CDS 33941 34129 . + 0 ID=cds-WP_002214085.1;Parent=gene-YPIP275_RS07525;Dbxref=GenBank:WP_002214085.1;Name=WP_002214085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214085.1;locus_tag=YPIP275_RS07525;product=hypothetical protein;protein_id=WP_002214085.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 34732 35682 . + . ID=gene-YPIP275_RS07535;Name=YPIP275_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07535;old_locus_tag=YPIP275_4298 NZ_AAOS02000007.1 Protein Homology CDS 34732 35682 . + 0 ID=cds-WP_002209868.1;Parent=gene-YPIP275_RS07535;Dbxref=GenBank:WP_002209868.1;Name=WP_002209868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002428232.1;locus_tag=YPIP275_RS07535;product=OmpG porin family protein;protein_id=WP_002209868.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 35797 37983 . + . ID=gene-YPIP275_RS07540;Name=yapM;gbkey=Gene;gene=yapM;gene_biotype=protein_coding;locus_tag=YPIP275_RS07540;old_locus_tag=YPIP275_4299 NZ_AAOS02000007.1 Protein Homology CDS 35797 37983 . + 0 ID=cds-WP_002209869.1;Parent=gene-YPIP275_RS07540;Dbxref=GenBank:WP_002209869.1;Name=WP_002209869.1;gbkey=CDS;gene=yapM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209869.1;locus_tag=YPIP275_RS07540;product=autotransporter YapM;protein_id=WP_002209869.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 38053 41166 . + . ID=gene-YPIP275_RS07545;Name=YPIP275_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07545;old_locus_tag=YPIP275_4300 NZ_AAOS02000007.1 Protein Homology CDS 38053 41166 . + 0 ID=cds-WP_002214081.1;Parent=gene-YPIP275_RS07545;Dbxref=GenBank:WP_002214081.1;Name=WP_002214081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214081.1;locus_tag=YPIP275_RS07545;product=chondroitinase family polysaccharide lyase;protein_id=WP_002214081.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 41511 42293 . - . ID=gene-YPIP275_RS07550;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS07550;old_locus_tag=YPIP275_4302 NZ_AAOS02000007.1 Protein Homology CDS 41511 42293 . - 0 ID=cds-WP_001317493.1-36;Parent=gene-YPIP275_RS07550;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS07550;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 42290 43312 . - . ID=gene-YPIP275_RS07555;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS07555;old_locus_tag=YPIP275_4303 NZ_AAOS02000007.1 Protein Homology CDS 42290 43312 . - 0 ID=cds-WP_000255944.1-30;Parent=gene-YPIP275_RS07555;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS07555;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 43369 43803 . + . ID=gene-YPIP275_RS07560;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS07560;old_locus_tag=YPIP275_4304 NZ_AAOS02000007.1 Protein Homology CDS 43369 43803 . + 0 ID=cds-WP_002209872.1;Parent=gene-YPIP275_RS07560;Dbxref=GenBank:WP_002209872.1;Name=WP_002209872.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011066964.1;locus_tag=YPIP275_RS07560;product=IS200/IS605 family transposase;protein_id=WP_002209872.1;transl_table=11 NZ_AAOS02000007.1 RefSeq pseudogene 43909 43971 . - . ID=gene-YPIP275_RS28535;Name=YPIP275_RS28535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28535;partial=true;pseudo=true;start_range=.,43909 NZ_AAOS02000007.1 Protein Homology CDS 43909 43971 . - 0 ID=cds-YPIP275_RS28535;Parent=gene-YPIP275_RS28535;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378124.1;locus_tag=YPIP275_RS28535;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;start_range=.,43909;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 44255 45808 . - . ID=gene-YPIP275_RS07565;Name=YPIP275_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07565;old_locus_tag=YPIP275_4305 NZ_AAOS02000007.1 Protein Homology CDS 44255 45808 . - 0 ID=cds-WP_002209873.1;Parent=gene-YPIP275_RS07565;Dbxref=GenBank:WP_002209873.1;Name=WP_002209873.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192896.1;locus_tag=YPIP275_RS07565;product=sulfatase family protein;protein_id=WP_002209873.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 46648 47424 . + . ID=gene-YPIP275_RS07570;Name=agaR;gbkey=Gene;gene=agaR;gene_biotype=protein_coding;locus_tag=YPIP275_RS07570;old_locus_tag=YPIP275_4307 NZ_AAOS02000007.1 Protein Homology CDS 46648 47424 . + 0 ID=cds-WP_002209875.1;Parent=gene-YPIP275_RS07570;Dbxref=GenBank:WP_002209875.1;Name=WP_002209875.1;gbkey=CDS;gene=agaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642265.1;locus_tag=YPIP275_RS07570;product=transcriptional repressor AgaR;protein_id=WP_002209875.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 47474 48772 . + . ID=gene-YPIP275_RS07575;Name=kbaZ;gbkey=Gene;gene=kbaZ;gene_biotype=protein_coding;locus_tag=YPIP275_RS07575;old_locus_tag=YPIP275_4308 NZ_AAOS02000007.1 Protein Homology CDS 47474 48772 . + 0 ID=cds-WP_002209876.1;Parent=gene-YPIP275_RS07575;Dbxref=GenBank:WP_002209876.1;Name=WP_002209876.1;gbkey=CDS;gene=kbaZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104707.1;locus_tag=YPIP275_RS07575;product=tagatose-bisphosphate aldolase subunit KbaZ;protein_id=WP_002209876.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 48769 49935 . + . ID=gene-YPIP275_RS07580;Name=YPIP275_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07580;old_locus_tag=YPIP275_4309 NZ_AAOS02000007.1 Protein Homology CDS 48769 49935 . + 0 ID=cds-WP_002209877.1;Parent=gene-YPIP275_RS07580;Dbxref=GenBank:WP_002209877.1;Name=WP_002209877.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413880.1;locus_tag=YPIP275_RS07580;product=SIS domain-containing protein;protein_id=WP_002209877.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 49953 50450 . + . ID=gene-YPIP275_RS07585;Name=agaV;gbkey=Gene;gene=agaV;gene_biotype=protein_coding;locus_tag=YPIP275_RS07585;old_locus_tag=YPIP275_4310 NZ_AAOS02000007.1 Protein Homology CDS 49953 50450 . + 0 ID=cds-WP_002209878.1;Parent=gene-YPIP275_RS07585;Dbxref=GenBank:WP_002209878.1;Name=WP_002209878.1;gbkey=CDS;gene=agaV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683876.1;locus_tag=YPIP275_RS07585;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_002209878.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 50497 51285 . + . ID=gene-YPIP275_RS07590;Name=agaW;gbkey=Gene;gene=agaW;gene_biotype=protein_coding;locus_tag=YPIP275_RS07590;old_locus_tag=YPIP275_4311 NZ_AAOS02000007.1 Protein Homology CDS 50497 51285 . + 0 ID=cds-WP_002209879.1;Parent=gene-YPIP275_RS07590;Dbxref=GenBank:WP_002209879.1;Name=WP_002209879.1;gbkey=CDS;gene=agaW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209879.1;locus_tag=YPIP275_RS07590;product=PTS N-acetylgalactosamine transporter subunit IIC;protein_id=WP_002209879.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 51275 52165 . + . ID=gene-YPIP275_RS07595;Name=YPIP275_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07595;old_locus_tag=YPIP275_4312 NZ_AAOS02000007.1 Protein Homology CDS 51275 52165 . + 0 ID=cds-WP_002209880.1;Parent=gene-YPIP275_RS07595;Dbxref=GenBank:WP_002209880.1;Name=WP_002209880.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000135474.1;locus_tag=YPIP275_RS07595;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_002209880.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 52251 52691 . + . ID=gene-YPIP275_RS07600;Name=agaF;gbkey=Gene;gene=agaF;gene_biotype=protein_coding;locus_tag=YPIP275_RS07600;old_locus_tag=YPIP275_4313 NZ_AAOS02000007.1 Protein Homology CDS 52251 52691 . + 0 ID=cds-WP_002209881.1;Parent=gene-YPIP275_RS07600;Dbxref=GenBank:WP_002209881.1;Name=WP_002209881.1;gbkey=CDS;gene=agaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104706.1;locus_tag=YPIP275_RS07600;product=PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;protein_id=WP_002209881.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 52694 53860 . + . ID=gene-YPIP275_RS07605;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=YPIP275_RS07605;old_locus_tag=YPIP275_4314 NZ_AAOS02000007.1 Protein Homology CDS 52694 53860 . + 0 ID=cds-WP_002209882.1;Parent=gene-YPIP275_RS07605;Dbxref=GenBank:WP_002209882.1;Name=WP_002209882.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209882.1;locus_tag=YPIP275_RS07605;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_002209882.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 54056 54811 . + . ID=gene-YPIP275_RS07610;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=YPIP275_RS07610;old_locus_tag=YPIP275_4315 NZ_AAOS02000007.1 Protein Homology CDS 54056 54811 . + 0 ID=cds-WP_002209883.1;Parent=gene-YPIP275_RS07610;Dbxref=GenBank:WP_002209883.1;Name=WP_002209883.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209883.1;locus_tag=YPIP275_RS07610;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_002209883.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 54827 55885 . + . ID=gene-YPIP275_RS07615;Name=YPIP275_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07615;old_locus_tag=YPIP275_4316 NZ_AAOS02000007.1 Protein Homology CDS 54827 55885 . + 0 ID=cds-WP_002209884.1;Parent=gene-YPIP275_RS07615;Dbxref=GenBank:WP_002209884.1;Name=WP_002209884.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209884.1;locus_tag=YPIP275_RS07615;product=glycoside hydrolase family 88/105 protein;protein_id=WP_002209884.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 56129 57355 . + . ID=gene-YPIP275_RS07620;Name=YPIP275_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07620;old_locus_tag=YPIP275_4317 NZ_AAOS02000007.1 Protein Homology CDS 56129 57355 . + 0 ID=cds-WP_002209885.1;Parent=gene-YPIP275_RS07620;Dbxref=GenBank:WP_002209885.1;Name=WP_002209885.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229928.1;locus_tag=YPIP275_RS07620;product=anaerobic sulfatase maturase;protein_id=WP_002209885.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 57376 58983 . + . ID=gene-YPIP275_RS07625;Name=YPIP275_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07625;old_locus_tag=YPIP275_4318 NZ_AAOS02000007.1 Protein Homology CDS 57376 58983 . + 0 ID=cds-WP_002209886.1;Parent=gene-YPIP275_RS07625;Dbxref=GenBank:WP_002209886.1;Name=WP_002209886.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192900.1;locus_tag=YPIP275_RS07625;product=sulfatase family protein;protein_id=WP_002209886.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 59106 60593 . + . ID=gene-YPIP275_RS07630;Name=YPIP275_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07630;old_locus_tag=YPIP275_4319 NZ_AAOS02000007.1 Protein Homology CDS 59106 60593 . + 0 ID=cds-WP_002209887.1;Parent=gene-YPIP275_RS07630;Dbxref=GenBank:WP_002209887.1;Name=WP_002209887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303733.1;locus_tag=YPIP275_RS07630;product=DUF2264 domain-containing protein;protein_id=WP_002209887.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 60702 61556 . + . ID=gene-YPIP275_RS07635;Name=YPIP275_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07635;old_locus_tag=YPIP275_4320 NZ_AAOS02000007.1 Protein Homology CDS 60702 61556 . + 0 ID=cds-WP_002209888.1;Parent=gene-YPIP275_RS07635;Dbxref=GenBank:WP_002209888.1;Name=WP_002209888.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192902.1;locus_tag=YPIP275_RS07635;product=tagatose bisphosphate family class II aldolase;protein_id=WP_002209888.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 61580 62158 . + . ID=gene-YPIP275_RS07640;Name=YPIP275_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07640;old_locus_tag=YPIP275_4321 NZ_AAOS02000007.1 Protein Homology CDS 61580 62158 . + 0 ID=cds-WP_002209889.1;Parent=gene-YPIP275_RS07640;Dbxref=GenBank:WP_002209889.1;Name=WP_002209889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683554.1;locus_tag=YPIP275_RS07640;product=DJ-1/PfpI family protein;protein_id=WP_002209889.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 62128 62409 . - . ID=gene-YPIP275_RS07645;Name=YPIP275_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07645 NZ_AAOS02000007.1 Protein Homology CDS 62128 62409 . - 0 ID=cds-WP_002215765.1;Parent=gene-YPIP275_RS07645;Dbxref=GenBank:WP_002215765.1;Name=WP_002215765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192904.1;locus_tag=YPIP275_RS07645;product=hypothetical protein;protein_id=WP_002215765.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 62399 63481 . - . ID=gene-YPIP275_RS07650;Name=YPIP275_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07650;old_locus_tag=YPIP275_4322 NZ_AAOS02000007.1 Protein Homology CDS 62399 63481 . - 0 ID=cds-WP_002209890.1;Parent=gene-YPIP275_RS07650;Dbxref=GenBank:WP_002209890.1;Name=WP_002209890.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209890.1;locus_tag=YPIP275_RS07650;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002209890.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 63875 65182 . + . ID=gene-YPIP275_RS07655;Name=YPIP275_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07655;old_locus_tag=YPIP275_4323 NZ_AAOS02000007.1 Protein Homology CDS 63875 65182 . + 0 ID=cds-WP_002209891.1;Parent=gene-YPIP275_RS07655;Dbxref=GenBank:WP_002209891.1;Name=WP_002209891.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906179.1;locus_tag=YPIP275_RS07655;product=MFS transporter;protein_id=WP_002209891.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 65333 67708 . + . ID=gene-YPIP275_RS07660;Name=YPIP275_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07660;old_locus_tag=YPIP275_4324 NZ_AAOS02000007.1 Protein Homology CDS 65333 67708 . + 0 ID=cds-WP_002209892.1;Parent=gene-YPIP275_RS07660;Dbxref=GenBank:WP_002209892.1;Name=WP_002209892.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209892.1;locus_tag=YPIP275_RS07660;product=glycoside hydrolase family 31 protein;protein_id=WP_002209892.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 68037 69110 . - . ID=gene-YPIP275_RS07665;Name=YPIP275_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07665;old_locus_tag=YPIP275_4326 NZ_AAOS02000007.1 Protein Homology CDS 68037 69110 . - 0 ID=cds-WP_002209894.1;Parent=gene-YPIP275_RS07665;Dbxref=GenBank:WP_002209894.1;Name=WP_002209894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104696.1;locus_tag=YPIP275_RS07665;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002209894.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 69382 70641 . + . ID=gene-YPIP275_RS07670;Name=YPIP275_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07670;old_locus_tag=YPIP275_4327 NZ_AAOS02000007.1 Protein Homology CDS 69382 70641 . + 0 ID=cds-WP_002215759.1;Parent=gene-YPIP275_RS07670;Dbxref=GenBank:WP_002215759.1;Name=WP_002215759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177240.1;locus_tag=YPIP275_RS07670;product=maltoporin;protein_id=WP_002215759.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 71014 71325 . - . ID=gene-YPIP275_RS07675;Name=YPIP275_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07675;old_locus_tag=YPIP275_4328 NZ_AAOS02000007.1 Protein Homology CDS 71014 71325 . - 0 ID=cds-WP_002209896.1;Parent=gene-YPIP275_RS07675;Dbxref=GenBank:WP_002209896.1;Name=WP_002209896.1;Ontology_term=GO:0009401,GO:0034219,GO:0008982,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209896.1;locus_tag=YPIP275_RS07675;product=PTS sugar transporter subunit IIB;protein_id=WP_002209896.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 71437 73497 . - . ID=gene-YPIP275_RS07680;Name=YPIP275_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07680;old_locus_tag=YPIP275_4329 NZ_AAOS02000007.1 Protein Homology CDS 71437 73497 . - 0 ID=cds-WP_002209897.1;Parent=gene-YPIP275_RS07680;Dbxref=GenBank:WP_002209897.1;Name=WP_002209897.1;Ontology_term=GO:0006012,GO:0004565,GO:0046872,GO:0009341;gbkey=CDS;go_component=beta-galactosidase complex|0009341||IEA;go_function=beta-galactosidase activity|0004565||IEA,metal ion binding|0046872||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209897.1;locus_tag=YPIP275_RS07680;product=beta-galactosidase;protein_id=WP_002209897.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 73548 74750 . - . ID=gene-YPIP275_RS07685;Name=YPIP275_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07685;old_locus_tag=YPIP275_4330 NZ_AAOS02000007.1 Protein Homology CDS 73548 74750 . - 0 ID=cds-WP_002209898.1;Parent=gene-YPIP275_RS07685;Dbxref=GenBank:WP_002209898.1;Name=WP_002209898.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225473.1;locus_tag=YPIP275_RS07685;product=glycoside hydrolase family 53 protein;protein_id=WP_002209898.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 74755 75606 . - . ID=gene-YPIP275_RS07690;Name=YPIP275_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07690;old_locus_tag=YPIP275_4331 NZ_AAOS02000007.1 Protein Homology CDS 74755 75606 . - 0 ID=cds-WP_002209899.1;Parent=gene-YPIP275_RS07690;Dbxref=GenBank:WP_002209899.1;Name=WP_002209899.1;Ontology_term=GO:0008643,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225472.1;locus_tag=YPIP275_RS07690;product=sugar ABC transporter permease;protein_id=WP_002209899.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 75618 76925 . - . ID=gene-YPIP275_RS07695;Name=YPIP275_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07695;old_locus_tag=YPIP275_4332 NZ_AAOS02000007.1 Protein Homology CDS 75618 76925 . - 0 ID=cds-WP_002209900.1;Parent=gene-YPIP275_RS07695;Dbxref=GenBank:WP_002209900.1;Name=WP_002209900.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004964623.1;locus_tag=YPIP275_RS07695;product=carbohydrate ABC transporter permease;protein_id=WP_002209900.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 77085 78320 . - . ID=gene-YPIP275_RS07700;Name=YPIP275_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07700;old_locus_tag=YPIP275_4333 NZ_AAOS02000007.1 Protein Homology CDS 77085 78320 . - 0 ID=cds-WP_002209901.1;Parent=gene-YPIP275_RS07700;Dbxref=GenBank:WP_002209901.1;Name=WP_002209901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225470.1;locus_tag=YPIP275_RS07700;product=extracellular solute-binding protein;protein_id=WP_002209901.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 78683 79783 . + . ID=gene-YPIP275_RS07705;Name=YPIP275_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07705;old_locus_tag=YPIP275_4334 NZ_AAOS02000007.1 Protein Homology CDS 78683 79783 . + 0 ID=cds-WP_002209902.1;Parent=gene-YPIP275_RS07705;Dbxref=GenBank:WP_002209902.1;Name=WP_002209902.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209902.1;locus_tag=YPIP275_RS07705;product=ABC transporter ATP-binding protein;protein_id=WP_002209902.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 80342 81850 . + . ID=gene-YPIP275_RS07710;Name=YPIP275_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07710;old_locus_tag=YPIP275_4335 NZ_AAOS02000007.1 Protein Homology CDS 80342 81850 . + 0 ID=cds-WP_002209903.1;Parent=gene-YPIP275_RS07710;Dbxref=GenBank:WP_002209903.1;Name=WP_002209903.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104694.1;locus_tag=YPIP275_RS07710;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209903.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 81922 82926 . + . ID=gene-YPIP275_RS07715;Name=YPIP275_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07715;old_locus_tag=YPIP275_4336 NZ_AAOS02000007.1 Protein Homology CDS 81922 82926 . + 0 ID=cds-WP_002209904.1;Parent=gene-YPIP275_RS07715;Dbxref=GenBank:WP_002209904.1;Name=WP_002209904.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209904.1;locus_tag=YPIP275_RS07715;product=ABC transporter permease;protein_id=WP_002209904.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 83361 84362 . + . ID=gene-YPIP275_RS07720;Name=YPIP275_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07720;old_locus_tag=YPIP275_4338 NZ_AAOS02000007.1 Protein Homology CDS 83361 84362 . + 0 ID=cds-WP_002209906.1;Parent=gene-YPIP275_RS07720;Dbxref=GenBank:WP_002209906.1;Name=WP_002209906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002422709.1;locus_tag=YPIP275_RS07720;product=substrate-binding domain-containing protein;protein_id=WP_002209906.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 85141 85659 . + . ID=gene-YPIP275_RS07725;Name=YPIP275_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07725;old_locus_tag=YPIP275_4339 NZ_AAOS02000007.1 Protein Homology CDS 85141 85659 . + 0 ID=cds-WP_002209907.1;Parent=gene-YPIP275_RS07725;Dbxref=GenBank:WP_002209907.1;Name=WP_002209907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209907.1;locus_tag=YPIP275_RS07725;product=hypothetical protein;protein_id=WP_002209907.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 86035 86892 . + . ID=gene-YPIP275_RS07730;Name=YPIP275_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07730;old_locus_tag=YPIP275_4340 NZ_AAOS02000007.1 Protein Homology CDS 86035 86892 . + 0 ID=cds-WP_002209908.1;Parent=gene-YPIP275_RS07730;Dbxref=GenBank:WP_002209908.1;Name=WP_002209908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104689.1;locus_tag=YPIP275_RS07730;product=YaeF family permuted papain-like enzyme;protein_id=WP_002209908.1;transl_table=11 NZ_AAOS02000007.1 RefSeq pseudogene 86854 87039 . - . ID=gene-YPIP275_RS28540;Name=YPIP275_RS28540;end_range=87039,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28540;partial=true;pseudo=true NZ_AAOS02000007.1 Protein Homology CDS 86854 87039 . - 0 ID=cds-YPIP275_RS28540;Parent=gene-YPIP275_RS28540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003677;end_range=87039,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004107092.1;locus_tag=YPIP275_RS28540;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 87316 87996 . + . ID=gene-YPIP275_RS07735;Name=YPIP275_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07735;old_locus_tag=YPIP275_4341 NZ_AAOS02000007.1 Protein Homology CDS 87316 87996 . + 0 ID=cds-WP_002209909.1;Parent=gene-YPIP275_RS07735;Dbxref=GenBank:WP_002209909.1;Name=WP_002209909.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192909.1;locus_tag=YPIP275_RS07735;product=PadR family transcriptional regulator;protein_id=WP_002209909.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 87996 88316 . + . ID=gene-YPIP275_RS07740;Name=YPIP275_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07740;old_locus_tag=YPIP275_4342 NZ_AAOS02000007.1 Protein Homology CDS 87996 88316 . + 0 ID=cds-WP_002209910.1;Parent=gene-YPIP275_RS07740;Dbxref=GenBank:WP_002209910.1;Name=WP_002209910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209910.1;locus_tag=YPIP275_RS07740;product=DUF3861 domain-containing protein;protein_id=WP_002209910.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 88399 88704 . - . ID=gene-YPIP275_RS07745;Name=YPIP275_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07745;old_locus_tag=YPIP275_4343 NZ_AAOS02000007.1 Protein Homology CDS 88399 88704 . - 0 ID=cds-WP_002226101.1;Parent=gene-YPIP275_RS07745;Dbxref=GenBank:WP_002226101.1;Name=WP_002226101.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002226101.1;locus_tag=YPIP275_RS07745;product=PAAR domain-containing protein;protein_id=WP_002226101.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 88921 89700 . - . ID=gene-YPIP275_RS07750;Name=YPIP275_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07750;old_locus_tag=YPIP275_4344 NZ_AAOS02000007.1 Protein Homology CDS 88921 89700 . - 0 ID=cds-WP_002209912.1;Parent=gene-YPIP275_RS07750;Dbxref=GenBank:WP_002209912.1;Name=WP_002209912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209912.1;locus_tag=YPIP275_RS07750;product=hypothetical protein;protein_id=WP_002209912.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 90305 91072 . - . ID=gene-YPIP275_RS07760;Name=YPIP275_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07760;old_locus_tag=YPIP275_4345 NZ_AAOS02000007.1 Protein Homology CDS 90305 91072 . - 0 ID=cds-WP_002209913.1;Parent=gene-YPIP275_RS07760;Dbxref=GenBank:WP_002209913.1;Name=WP_002209913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209913.1;locus_tag=YPIP275_RS07760;product=DUF3142 domain-containing protein;protein_id=WP_002209913.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 91042 93201 . - . ID=gene-YPIP275_RS07765;Name=YPIP275_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07765;old_locus_tag=YPIP275_4346 NZ_AAOS02000007.1 Protein Homology CDS 91042 93201 . - 0 ID=cds-WP_002209914.1;Parent=gene-YPIP275_RS07765;Dbxref=GenBank:WP_002209914.1;Name=WP_002209914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104688.1;locus_tag=YPIP275_RS07765;product=PA5441 family protein;protein_id=WP_002209914.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 93611 93895 . - . ID=gene-YPIP275_RS07770;Name=YPIP275_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07770 NZ_AAOS02000007.1 Protein Homology CDS 93611 93895 . - 0 ID=cds-WP_002214798.1;Parent=gene-YPIP275_RS07770;Dbxref=GenBank:WP_002214798.1;Name=WP_002214798.1;Ontology_term=GO:0030153,GO:0015643;gbkey=CDS;go_function=toxic substance binding|0015643||IEA;go_process=bacteriocin immunity|0030153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192913.1;locus_tag=YPIP275_RS07770;product=colicin immunity domain-containing protein;protein_id=WP_002214798.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 93942 94199 . - . ID=gene-YPIP275_RS07775;Name=YPIP275_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07775;old_locus_tag=YPIP275_4347 NZ_AAOS02000007.1 Protein Homology CDS 93942 94199 . - 0 ID=cds-WP_002228063.1;Parent=gene-YPIP275_RS07775;Dbxref=GenBank:WP_002228063.1;Name=WP_002228063.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF056919.1;locus_tag=YPIP275_RS07775;product=YxzC family protein;protein_id=WP_002228063.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 94518 94712 . - . ID=gene-YPIP275_RS07780;Name=YPIP275_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07780 NZ_AAOS02000007.1 Protein Homology CDS 94518 94712 . - 0 ID=cds-WP_002214795.1;Parent=gene-YPIP275_RS07780;Dbxref=GenBank:WP_002214795.1;Name=WP_002214795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214795.1;locus_tag=YPIP275_RS07780;product=CPCC family cysteine-rich protein;protein_id=WP_002214795.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 94709 96247 . - . ID=gene-YPIP275_RS07785;Name=YPIP275_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07785;old_locus_tag=YPIP275_4349 NZ_AAOS02000007.1 Protein Homology CDS 94709 96247 . - 0 ID=cds-WP_002214794.1;Parent=gene-YPIP275_RS07785;Dbxref=GenBank:WP_002214794.1;Name=WP_002214794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012230138.1;locus_tag=YPIP275_RS07785;product=S-type pyocin domain-containing protein;protein_id=WP_002214794.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 96751 97893 . - . ID=gene-YPIP275_RS07790;Name=YPIP275_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07790;old_locus_tag=YPIP275_4350 NZ_AAOS02000007.1 Protein Homology CDS 96751 97893 . - 0 ID=cds-WP_002209918.1;Parent=gene-YPIP275_RS07790;Dbxref=GenBank:WP_002209918.1;Name=WP_002209918.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906176.1;locus_tag=YPIP275_RS07790;product=Fic family protein;protein_id=WP_002209918.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 98162 98527 . + . ID=gene-YPIP275_RS07795;Name=YPIP275_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07795;old_locus_tag=YPIP275_4351 NZ_AAOS02000007.1 Protein Homology CDS 98162 98527 . + 0 ID=cds-WP_002209919.1;Parent=gene-YPIP275_RS07795;Dbxref=GenBank:WP_002209919.1;Name=WP_002209919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192915.1;locus_tag=YPIP275_RS07795;product=hypothetical protein;protein_id=WP_002209919.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 98540 98776 . + . ID=gene-YPIP275_RS07800;Name=YPIP275_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07800;old_locus_tag=YPIP275_4352 NZ_AAOS02000007.1 Protein Homology CDS 98540 98776 . + 0 ID=cds-WP_002214792.1;Parent=gene-YPIP275_RS07800;Dbxref=GenBank:WP_002214792.1;Name=WP_002214792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214792.1;locus_tag=YPIP275_RS07800;product=hypothetical protein;protein_id=WP_002214792.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 98782 99114 . + . ID=gene-YPIP275_RS07805;Name=YPIP275_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07805;old_locus_tag=YPIP275_4353 NZ_AAOS02000007.1 Protein Homology CDS 98782 99114 . + 0 ID=cds-WP_002214791.1;Parent=gene-YPIP275_RS07805;Dbxref=GenBank:WP_002214791.1;Name=WP_002214791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214791.1;locus_tag=YPIP275_RS07805;product=hypothetical protein;protein_id=WP_002214791.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 99296 99496 . + . ID=gene-YPIP275_RS07810;Name=YPIP275_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07810;old_locus_tag=YPIP275_4354 NZ_AAOS02000007.1 Protein Homology CDS 99296 99496 . + 0 ID=cds-WP_002209920.1;Parent=gene-YPIP275_RS07810;Dbxref=GenBank:WP_002209920.1;Name=WP_002209920.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209920.1;locus_tag=YPIP275_RS07810;product=helix-turn-helix transcriptional regulator;protein_id=WP_002209920.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 99510 99662 . - . ID=gene-YPIP275_RS07815;Name=YPIP275_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07815;old_locus_tag=YPIP275_4355 NZ_AAOS02000007.1 Protein Homology CDS 99510 99662 . - 0 ID=cds-WP_002209921.1;Parent=gene-YPIP275_RS07815;Dbxref=GenBank:WP_002209921.1;Name=WP_002209921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158307.1;locus_tag=YPIP275_RS07815;product=hypothetical protein;protein_id=WP_002209921.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 99655 99981 . - . ID=gene-YPIP275_RS07820;Name=YPIP275_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07820;old_locus_tag=YPIP275_4356 NZ_AAOS02000007.1 Protein Homology CDS 99655 99981 . - 0 ID=cds-WP_002209922.1;Parent=gene-YPIP275_RS07820;Dbxref=GenBank:WP_002209922.1;Name=WP_002209922.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209922.1;locus_tag=YPIP275_RS07820;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_002209922.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 100281 102572 . + . ID=gene-YPIP275_RS07825;Name=YPIP275_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07825;old_locus_tag=YPIP275_4357 NZ_AAOS02000007.1 Protein Homology CDS 100281 102572 . + 0 ID=cds-WP_002209923.1;Parent=gene-YPIP275_RS07825;Dbxref=GenBank:WP_002209923.1;Name=WP_002209923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209923.1;locus_tag=YPIP275_RS07825;product=primase-like DNA-binding domain-containing protein;protein_id=WP_002209923.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 102972 103370 . - . ID=gene-YPIP275_RS07830;Name=YPIP275_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07830;old_locus_tag=YPIP275_4358 NZ_AAOS02000007.1 Protein Homology CDS 102972 103370 . - 0 ID=cds-WP_002209924.1;Parent=gene-YPIP275_RS07830;Dbxref=GenBank:WP_002209924.1;Name=WP_002209924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209924.1;locus_tag=YPIP275_RS07830;product=type II toxin-antitoxin system MqsA family antitoxin;protein_id=WP_002209924.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 103370 103666 . - . ID=gene-YPIP275_RS07835;Name=YPIP275_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07835 NZ_AAOS02000007.1 Protein Homology CDS 103370 103666 . - 0 ID=cds-WP_002214787.1;Parent=gene-YPIP275_RS07835;Dbxref=GenBank:WP_002214787.1;Name=WP_002214787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214787.1;locus_tag=YPIP275_RS07835;product=type II toxin-antitoxin system MqsR family toxin;protein_id=WP_002214787.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 103830 104192 . - . ID=gene-YPIP275_RS07840;Name=YPIP275_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07840;old_locus_tag=YPIP275_4359 NZ_AAOS02000007.1 Protein Homology CDS 103830 104192 . - 0 ID=cds-WP_002209925.1;Parent=gene-YPIP275_RS07840;Dbxref=GenBank:WP_002209925.1;Name=WP_002209925.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192920.1;locus_tag=YPIP275_RS07840;product=helix-turn-helix domain-containing protein;protein_id=WP_002209925.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 104255 104515 . - . ID=gene-YPIP275_RS07845;Name=YPIP275_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07845 NZ_AAOS02000007.1 Protein Homology CDS 104255 104515 . - 0 ID=cds-WP_002214785.1;Parent=gene-YPIP275_RS07845;Dbxref=GenBank:WP_002214785.1;Name=WP_002214785.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214785.1;locus_tag=YPIP275_RS07845;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_002214785.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 105113 105298 . + . ID=gene-YPIP275_RS07855;Name=YPIP275_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07855;old_locus_tag=YPIP275_4363 NZ_AAOS02000007.1 Protein Homology CDS 105113 105298 . + 0 ID=cds-WP_002209928.1;Parent=gene-YPIP275_RS07855;Dbxref=GenBank:WP_002209928.1;Name=WP_002209928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209928.1;locus_tag=YPIP275_RS07855;product=hypothetical protein;protein_id=WP_002209928.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 105380 106594 . - . ID=gene-YPIP275_RS07860;Name=YPIP275_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07860;old_locus_tag=YPIP275_4364 NZ_AAOS02000007.1 Protein Homology CDS 105380 106594 . - 0 ID=cds-WP_002209929.1;Parent=gene-YPIP275_RS07860;Dbxref=GenBank:WP_002209929.1;Name=WP_002209929.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192954.1;locus_tag=YPIP275_RS07860;product=tyrosine-type recombinase/integrase;protein_id=WP_002209929.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 106760 106833 . - . ID=gene-YPIP275_RS07865;Name=YPIP275_RS07865;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS07865;old_locus_tag=YPIP275_4365 NZ_AAOS02000007.1 tRNAscan-SE tRNA 106760 106833 . - . ID=rna-YPIP275_RS07865;Parent=gene-YPIP275_RS07865;anticodon=(pos:complement(106799..106801));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS07865;product=tRNA-Gly NZ_AAOS02000007.1 tRNAscan-SE exon 106760 106833 . - . ID=exon-YPIP275_RS07865-1;Parent=rna-YPIP275_RS07865;anticodon=(pos:complement(106799..106801));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS07865;product=tRNA-Gly NZ_AAOS02000007.1 RefSeq gene 107027 108544 . - . ID=gene-YPIP275_RS07870;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=YPIP275_RS07870;old_locus_tag=YPIP275_4366 NZ_AAOS02000007.1 Protein Homology CDS 107027 108544 . - 0 ID=cds-WP_002209930.1;Parent=gene-YPIP275_RS07870;Dbxref=GenBank:WP_002209930.1;Name=WP_002209930.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146591.1;locus_tag=YPIP275_RS07870;product=lysine--tRNA ligase;protein_id=WP_002209930.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 108554 109652 . - . ID=gene-YPIP275_RS07875;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=YPIP275_RS07875;old_locus_tag=YPIP275_4367 NZ_AAOS02000007.1 Protein Homology CDS 109578 109652 . - 0 ID=cds-WP_002228062.1;Parent=gene-YPIP275_RS07875;Dbxref=GenBank:WP_002228062.1;Name=WP_002228062.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=YPIP275_RS07875;product=peptide chain release factor 2;protein_id=WP_002228062.1;transl_table=11 NZ_AAOS02000007.1 Protein Homology CDS 108554 109576 . - 0 ID=cds-WP_002228062.1;Parent=gene-YPIP275_RS07875;Dbxref=GenBank:WP_002228062.1;Name=WP_002228062.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=YPIP275_RS07875;product=peptide chain release factor 2;protein_id=WP_002228062.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 109831 111564 . - . ID=gene-YPIP275_RS07880;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS07880;old_locus_tag=YPIP275_4368 NZ_AAOS02000007.1 Protein Homology CDS 109831 111564 . - 0 ID=cds-WP_002209931.1;Parent=gene-YPIP275_RS07880;Dbxref=GenBank:WP_002209931.1;Name=WP_002209931.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166036.1;locus_tag=YPIP275_RS07880;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_002209931.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 111571 112287 . - . ID=gene-YPIP275_RS07885;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=YPIP275_RS07885;old_locus_tag=YPIP275_4369 NZ_AAOS02000007.1 Protein Homology CDS 111571 112287 . - 0 ID=cds-WP_002209932.1;Parent=gene-YPIP275_RS07885;Dbxref=GenBank:WP_002209932.1;Name=WP_002209932.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209932.1;locus_tag=YPIP275_RS07885;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_002209932.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 112318 113217 . - . ID=gene-YPIP275_RS07890;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=YPIP275_RS07890;old_locus_tag=YPIP275_4370 NZ_AAOS02000007.1 Protein Homology CDS 112318 113217 . - 0 ID=cds-WP_002209933.1;Parent=gene-YPIP275_RS07890;Dbxref=GenBank:WP_002209933.1;Name=WP_002209933.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209933.1;locus_tag=YPIP275_RS07890;product=site-specific tyrosine recombinase XerD;protein_id=WP_002209933.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 113324 113842 . + . ID=gene-YPIP275_RS07895;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=YPIP275_RS07895;old_locus_tag=YPIP275_4371 NZ_AAOS02000007.1 Protein Homology CDS 113324 113842 . + 0 ID=cds-WP_002209934.1;Parent=gene-YPIP275_RS07895;Dbxref=GenBank:WP_002209934.1;Name=WP_002209934.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209934.1;locus_tag=YPIP275_RS07895;product=flavodoxin FldB;protein_id=WP_002209934.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 113932 115389 . - . ID=gene-YPIP275_RS07900;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=YPIP275_RS07900;old_locus_tag=YPIP275_4372 NZ_AAOS02000007.1 Protein Homology CDS 113932 115389 . - 0 ID=cds-WP_002220113.1;Parent=gene-YPIP275_RS07900;Dbxref=GenBank:WP_002220113.1;Name=WP_002220113.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220113.1;locus_tag=YPIP275_RS07900;product=cell envelope integrity protein CreD;protein_id=WP_002220113.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 115510 116928 . - . ID=gene-YPIP275_RS07905;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=YPIP275_RS07905;old_locus_tag=YPIP275_4373 NZ_AAOS02000007.1 Protein Homology CDS 115510 116928 . - 0 ID=cds-WP_002209936.1;Parent=gene-YPIP275_RS07905;Dbxref=GenBank:WP_002209936.1;Name=WP_002209936.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209936.1;locus_tag=YPIP275_RS07905;product=two-component system sensor histidine kinase CreC;protein_id=WP_002209936.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 116953 117651 . - . ID=gene-YPIP275_RS07910;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=YPIP275_RS07910;old_locus_tag=YPIP275_4374 NZ_AAOS02000007.1 Protein Homology CDS 116953 117651 . - 0 ID=cds-WP_002209937.1;Parent=gene-YPIP275_RS07910;Dbxref=GenBank:WP_002209937.1;Name=WP_002209937.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209937.1;locus_tag=YPIP275_RS07910;product=two-component system response regulator CreB;protein_id=WP_002209937.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 117651 118076 . - . ID=gene-YPIP275_RS07915;Name=YPIP275_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07915 NZ_AAOS02000007.1 Protein Homology CDS 117651 118076 . - 0 ID=cds-WP_002215144.1;Parent=gene-YPIP275_RS07915;Dbxref=GenBank:WP_002215144.1;Name=WP_002215144.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104676.1;locus_tag=YPIP275_RS07915;product=protein YgfX;protein_id=WP_002215144.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 118057 118323 . - . ID=gene-YPIP275_RS07920;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=YPIP275_RS07920;old_locus_tag=YPIP275_4376 NZ_AAOS02000007.1 Protein Homology CDS 118057 118323 . - 0 ID=cds-WP_002209939.1;Parent=gene-YPIP275_RS07920;Dbxref=GenBank:WP_002209939.1;Name=WP_002209939.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311796.1;locus_tag=YPIP275_RS07920;product=FAD assembly factor SdhE;protein_id=WP_002209939.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 118640 119632 . + . ID=gene-YPIP275_RS07925;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=YPIP275_RS07925;old_locus_tag=YPIP275_4377 NZ_AAOS02000007.1 Protein Homology CDS 118640 119632 . + 0 ID=cds-WP_002209940.1;Parent=gene-YPIP275_RS07925;Dbxref=GenBank:WP_002209940.1;Name=WP_002209940.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413924.1;locus_tag=YPIP275_RS07925;product=tRNA-modifying protein YgfZ;protein_id=WP_002209940.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 119705 120202 . - . ID=gene-YPIP275_RS07930;Name=YPIP275_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07930;old_locus_tag=YPIP275_4378 NZ_AAOS02000007.1 Protein Homology CDS 119705 120202 . - 0 ID=cds-WP_002209941.1;Parent=gene-YPIP275_RS07930;Dbxref=GenBank:WP_002209941.1;Name=WP_002209941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209941.1;locus_tag=YPIP275_RS07930;product=DUF2165 family protein;protein_id=WP_002209941.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 120460 121161 . - . ID=gene-YPIP275_RS07935;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=YPIP275_RS07935;old_locus_tag=YPIP275_4379 NZ_AAOS02000007.1 Protein Homology CDS 120460 121161 . - 0 ID=cds-WP_002209942.1;Parent=gene-YPIP275_RS07935;Dbxref=GenBank:WP_002209942.1;Name=WP_002209942.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303662.1;locus_tag=YPIP275_RS07935;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_002209942.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 121363 122466 . - . ID=gene-YPIP275_RS07940;Name=YPIP275_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07940;old_locus_tag=YPIP275_4380 NZ_AAOS02000007.1 Protein Homology CDS 121363 122466 . - 0 ID=cds-WP_002209943.1;Parent=gene-YPIP275_RS07940;Dbxref=GenBank:WP_002209943.1;Name=WP_002209943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104675.1;locus_tag=YPIP275_RS07940;product=hypothetical protein;protein_id=WP_002209943.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 122570 124495 . - . ID=gene-YPIP275_RS07945;Name=YPIP275_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07945;old_locus_tag=YPIP275_4381 NZ_AAOS02000007.1 Protein Homology CDS 122570 124495 . - 0 ID=cds-WP_011055729.1;Parent=gene-YPIP275_RS07945;Dbxref=GenBank:WP_011055729.1;Name=WP_011055729.1;Ontology_term=GO:0007155,GO:0015031;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304000.1;locus_tag=YPIP275_RS07945;product=autotransporter adhesin YapN;protein_id=WP_011055729.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 124543 124695 . - . ID=gene-YPIP275_RS07950;Name=YPIP275_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07950;old_locus_tag=YPIP275_4382 NZ_AAOS02000007.1 Protein Homology CDS 124543 124695 . - 0 ID=cds-WP_002209944.1;Parent=gene-YPIP275_RS07950;Dbxref=GenBank:WP_002209944.1;Name=WP_002209944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209944.1;locus_tag=YPIP275_RS07950;product=hypothetical protein;protein_id=WP_002209944.1;transl_table=11 NZ_AAOS02000007.1 RefSeq pseudogene 125645 125740 . - . ID=gene-YPIP275_RS27085;Name=YPIP275_RS27085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS27085;partial=true;pseudo=true;start_range=.,125645 NZ_AAOS02000007.1 Protein Homology CDS 125645 125740 . - 0 ID=cds-YPIP275_RS27085;Parent=gene-YPIP275_RS27085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082406.1;locus_tag=YPIP275_RS27085;partial=true;product=SDR family NAD(P)-dependent oxidoreductase;pseudo=true;start_range=.,125645;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 125756 126193 . - . ID=gene-YPIP275_RS07955;Name=YPIP275_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07955;old_locus_tag=YPIP275_4384 NZ_AAOS02000007.1 Protein Homology CDS 125756 126193 . - 0 ID=cds-WP_002209946.1;Parent=gene-YPIP275_RS07955;Dbxref=GenBank:WP_002209946.1;Name=WP_002209946.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209946.1;locus_tag=YPIP275_RS07955;product=lipocalin-like domain-containing protein;protein_id=WP_002209946.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 126463 126600 . + . ID=gene-YPIP275_RS29190;Name=YPIP275_RS29190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29190 NZ_AAOS02000007.1 Protein Homology CDS 126463 126600 . + 0 ID=cds-WP_155237770.1;Parent=gene-YPIP275_RS29190;Dbxref=GenBank:WP_155237770.1;Name=WP_155237770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430096.1;locus_tag=YPIP275_RS29190;product=hypothetical protein;protein_id=WP_155237770.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 126571 129450 . - . ID=gene-YPIP275_RS07960;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=YPIP275_RS07960;old_locus_tag=YPIP275_4385 NZ_AAOS02000007.1 Protein Homology CDS 126571 129450 . - 0 ID=cds-WP_002209947.1;Parent=gene-YPIP275_RS07960;Dbxref=GenBank:WP_002209947.1;Name=WP_002209947.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455636.1;locus_tag=YPIP275_RS07960;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_002209947.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 129662 130048 . - . ID=gene-YPIP275_RS07965;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=YPIP275_RS07965;old_locus_tag=YPIP275_4386 NZ_AAOS02000007.1 Protein Homology CDS 129662 130048 . - 0 ID=cds-WP_002209948.1;Parent=gene-YPIP275_RS07965;Dbxref=GenBank:WP_002209948.1;Name=WP_002209948.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209948.1;locus_tag=YPIP275_RS07965;product=glycine cleavage system protein GcvH;protein_id=WP_002209948.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 130117 131214 . - . ID=gene-YPIP275_RS07970;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=YPIP275_RS07970;old_locus_tag=YPIP275_4387 NZ_AAOS02000007.1 Protein Homology CDS 130117 131214 . - 0 ID=cds-WP_002209949.1;Parent=gene-YPIP275_RS07970;Dbxref=GenBank:WP_002209949.1;Name=WP_002209949.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209949.1;locus_tag=YPIP275_RS07970;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_002209949.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 131935 133155 . - . ID=gene-YPIP275_RS07975;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=YPIP275_RS07975;old_locus_tag=YPIP275_4388 NZ_AAOS02000007.1 Protein Homology CDS 131935 133155 . - 0 ID=cds-WP_002209950.1;Parent=gene-YPIP275_RS07975;Dbxref=GenBank:WP_002209950.1;Name=WP_002209950.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104673.1;locus_tag=YPIP275_RS07975;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_002209950.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 133328 134506 . - . ID=gene-YPIP275_RS07980;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=YPIP275_RS07980;old_locus_tag=YPIP275_4389 NZ_AAOS02000007.1 Protein Homology CDS 133328 134506 . - 0 ID=cds-WP_002209951.1;Parent=gene-YPIP275_RS07980;Dbxref=GenBank:WP_002209951.1;Name=WP_002209951.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209951.1;locus_tag=YPIP275_RS07980;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_002209951.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 134575 135888 . - . ID=gene-YPIP275_RS07985;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=YPIP275_RS07985;old_locus_tag=YPIP275_4390 NZ_AAOS02000007.1 Protein Homology CDS 134575 135888 . - 0 ID=cds-WP_002209952.1;Parent=gene-YPIP275_RS07985;Dbxref=GenBank:WP_002209952.1;Name=WP_002209952.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192964.1;locus_tag=YPIP275_RS07985;product=Xaa-Pro aminopeptidase;protein_id=WP_002209952.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 135976 136554 . - . ID=gene-YPIP275_RS07990;Name=YPIP275_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07990;old_locus_tag=YPIP275_4391 NZ_AAOS02000007.1 Protein Homology CDS 135976 136554 . - 0 ID=cds-WP_002209953.1;Parent=gene-YPIP275_RS07990;Dbxref=GenBank:WP_002209953.1;Name=WP_002209953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209953.1;locus_tag=YPIP275_RS07990;product=YecA/YgfB family protein;protein_id=WP_002209953.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 136891 137220 . + . ID=gene-YPIP275_RS07995;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=YPIP275_RS07995;old_locus_tag=YPIP275_4392 NZ_AAOS02000007.1 Protein Homology CDS 136891 137220 . + 0 ID=cds-WP_002209954.1;Parent=gene-YPIP275_RS07995;Dbxref=GenBank:WP_002209954.1;Name=WP_002209954.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005971092.1;locus_tag=YPIP275_RS07995;product=cell division protein ZapA;protein_id=WP_002209954.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 137276 137458 . + . ID=gene-YPIP275_RS27100;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=YPIP275_RS27100 NZ_AAOS02000007.1 cmsearch ncRNA 137276 137458 . + . ID=rna-YPIP275_RS27100;Parent=gene-YPIP275_RS27100;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS27100;product=6S RNA NZ_AAOS02000007.1 cmsearch exon 137276 137458 . + . ID=exon-YPIP275_RS27100-1;Parent=rna-YPIP275_RS27100;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS27100;product=6S RNA NZ_AAOS02000007.1 RefSeq gene 137584 138180 . + . ID=gene-YPIP275_RS08000;Name=YPIP275_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08000;old_locus_tag=YPIP275_4393 NZ_AAOS02000007.1 Protein Homology CDS 137584 138180 . + 0 ID=cds-WP_002209955.1;Parent=gene-YPIP275_RS08000;Dbxref=GenBank:WP_002209955.1;Name=WP_002209955.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079000.1;locus_tag=YPIP275_RS08000;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_002209955.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 138331 138432 . + . ID=gene-YPIP275_RS28545;Name=YPIP275_RS28545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28545 NZ_AAOS02000007.1 Protein Homology CDS 138331 138432 . + 0 ID=cds-WP_190984442.1;Parent=gene-YPIP275_RS28545;Dbxref=GenBank:WP_190984442.1;Name=WP_190984442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264692.1;locus_tag=YPIP275_RS28545;product=gluconate 5-dehydrogenase;protein_id=WP_190984442.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 138445 139686 . - . ID=gene-YPIP275_RS08005;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08005;old_locus_tag=YPIP275_4394 NZ_AAOS02000007.1 Protein Homology CDS 138445 139686 . - 0 ID=cds-WP_002209956.1;Parent=gene-YPIP275_RS08005;Dbxref=GenBank:WP_002209956.1;Name=WP_002209956.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228712.1;locus_tag=YPIP275_RS08005;product=phosphoglycerate dehydrogenase;protein_id=WP_002209956.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 139993 140649 . - . ID=gene-YPIP275_RS08010;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08010;old_locus_tag=YPIP275_4395 NZ_AAOS02000007.1 Protein Homology CDS 139993 140649 . - 0 ID=cds-WP_002209957.1;Parent=gene-YPIP275_RS08010;Dbxref=GenBank:WP_002209957.1;Name=WP_002209957.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209957.1;locus_tag=YPIP275_RS08010;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_002209957.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 140991 141899 . + . ID=gene-YPIP275_RS08015;Name=YPIP275_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08015;old_locus_tag=YPIP275_4396 NZ_AAOS02000007.1 Protein Homology CDS 140991 141899 . + 0 ID=cds-WP_002209958.1;Parent=gene-YPIP275_RS08015;Dbxref=GenBank:WP_002209958.1;Name=WP_002209958.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209958.1;locus_tag=YPIP275_RS08015;product=LysR family transcriptional regulator ArgP;protein_id=WP_002209958.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 141910 142689 . - . ID=gene-YPIP275_RS08020;Name=YPIP275_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08020;old_locus_tag=YPIP275_4397 NZ_AAOS02000007.1 Protein Homology CDS 141910 142689 . - 0 ID=cds-WP_002209959.1;Parent=gene-YPIP275_RS08020;Dbxref=GenBank:WP_002209959.1;Name=WP_002209959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192966.1;locus_tag=YPIP275_RS08020;product=oxidative stress defense protein;protein_id=WP_002209959.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 142879 143496 . - . ID=gene-YPIP275_RS08025;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=YPIP275_RS08025;old_locus_tag=YPIP275_4398 NZ_AAOS02000007.1 Protein Homology CDS 142879 143496 . - 0 ID=cds-WP_002209960.1;Parent=gene-YPIP275_RS08025;Dbxref=GenBank:WP_002209960.1;Name=WP_002209960.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303656.1;locus_tag=YPIP275_RS08025;product=arginine exporter ArgO;protein_id=WP_002209960.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 143759 144628 . - . ID=gene-YPIP275_RS08030;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=YPIP275_RS08030;old_locus_tag=YPIP275_4399 NZ_AAOS02000007.1 Protein Homology CDS 143759 144628 . - 0 ID=cds-WP_002209961.1;Parent=gene-YPIP275_RS08030;Dbxref=GenBank:WP_002209961.1;Name=WP_002209961.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209961.1;locus_tag=YPIP275_RS08030;product=small-conductance mechanosensitive channel MscS;protein_id=WP_002209961.1;transl_table=11 NZ_AAOS02000007.1 RefSeq pseudogene 144953 145021 . + . ID=gene-YPIP275_RS28550;Name=YPIP275_RS28550;end_range=145021,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28550;partial=true;pseudo=true NZ_AAOS02000007.1 Protein Homology CDS 144953 145021 . + 0 ID=cds-YPIP275_RS28550;Parent=gene-YPIP275_RS28550;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=145021,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=YPIP275_RS28550;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 145066 146145 . - . ID=gene-YPIP275_RS08040;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08040;old_locus_tag=YPIP275_4400 NZ_AAOS02000007.1 Protein Homology CDS 145066 146145 . - 0 ID=cds-WP_002209962.1;Parent=gene-YPIP275_RS08040;Dbxref=GenBank:WP_002209962.1;Name=WP_002209962.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461984.1;locus_tag=YPIP275_RS08040;product=class II fructose-bisphosphate aldolase;protein_id=WP_002209962.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 146265 147428 . - . ID=gene-YPIP275_RS08045;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=YPIP275_RS08045;old_locus_tag=YPIP275_4401 NZ_AAOS02000007.1 Protein Homology CDS 146265 147428 . - 0 ID=cds-WP_002209963.1;Parent=gene-YPIP275_RS08045;Dbxref=GenBank:WP_002209963.1;Name=WP_002209963.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228721.1;locus_tag=YPIP275_RS08045;product=phosphoglycerate kinase;protein_id=WP_002209963.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 147531 148547 . - . ID=gene-YPIP275_RS08050;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=YPIP275_RS08050;old_locus_tag=YPIP275_4402 NZ_AAOS02000007.1 Protein Homology CDS 147531 148547 . - 0 ID=cds-WP_002209964.1;Parent=gene-YPIP275_RS08050;Dbxref=GenBank:WP_002209964.1;Name=WP_002209964.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209964.1;locus_tag=YPIP275_RS08050;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_002209964.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 148888 149346 . - . ID=gene-YPIP275_RS08055;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08055;old_locus_tag=YPIP275_4403 NZ_AAOS02000007.1 Protein Homology CDS 148888 149346 . - 0 ID=cds-WP_002213759.1-23;Parent=gene-YPIP275_RS08055;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS08055;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 149654 151648 . - . ID=gene-YPIP275_RS08060;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=YPIP275_RS08060;old_locus_tag=YPIP275_4404 NZ_AAOS02000007.1 Protein Homology CDS 149654 151648 . - 0 ID=cds-WP_002209965.1;Parent=gene-YPIP275_RS08060;Dbxref=GenBank:WP_002209965.1;Name=WP_002209965.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379005.1;locus_tag=YPIP275_RS08060;product=transketolase;protein_id=WP_002209965.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 151976 152998 . + . ID=gene-YPIP275_RS08065;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08065;old_locus_tag=YPIP275_4405 NZ_AAOS02000007.1 Protein Homology CDS 151976 152998 . + 0 ID=cds-WP_000255944.1-31;Parent=gene-YPIP275_RS08065;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS08065;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 152995 153777 . + . ID=gene-YPIP275_RS08070;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS08070;old_locus_tag=YPIP275_4406 NZ_AAOS02000007.1 Protein Homology CDS 152995 153777 . + 0 ID=cds-WP_001317493.1-37;Parent=gene-YPIP275_RS08070;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS08070;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 154098 154850 . + . ID=gene-YPIP275_RS08075;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;locus_tag=YPIP275_RS08075;old_locus_tag=YPIP275_4408 NZ_AAOS02000007.1 Protein Homology CDS 154098 154850 . + 0 ID=cds-WP_002209967.1;Parent=gene-YPIP275_RS08075;Dbxref=GenBank:WP_002209967.1;Name=WP_002209967.1;Ontology_term=GO:0004222;gbkey=CDS;gene=loiP;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005192806.1;locus_tag=YPIP275_RS08075;product=metalloprotease LoiP;protein_id=WP_002209967.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 154996 155106 . + . ID=gene-YPIP275_RS29195;Name=YPIP275_RS29195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29195 NZ_AAOS02000007.1 Protein Homology CDS 154996 155106 . + 0 ID=cds-WP_071525520.1;Parent=gene-YPIP275_RS29195;Dbxref=GenBank:WP_071525520.1;Name=WP_071525520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=YPIP275_RS29195;product=gluconate 5-dehydrogenase;protein_id=WP_071525520.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 155140 155460 . - . ID=gene-YPIP275_RS08080;Name=YPIP275_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08080;old_locus_tag=YPIP275_4409 NZ_AAOS02000007.1 Protein Homology CDS 155140 155460 . - 0 ID=cds-WP_002209968.1;Parent=gene-YPIP275_RS08080;Dbxref=GenBank:WP_002209968.1;Name=WP_002209968.1;Ontology_term=GO:0009056,GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209968.1;locus_tag=YPIP275_RS08080;product=non-heme iron oxygenase ferredoxin subunit;protein_id=WP_002209968.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 155620 157599 . - . ID=gene-YPIP275_RS08085;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08085;old_locus_tag=YPIP275_4410 NZ_AAOS02000007.1 Protein Homology CDS 155620 157599 . - 0 ID=cds-WP_002209969.1;Parent=gene-YPIP275_RS08085;Dbxref=GenBank:WP_002209969.1;Name=WP_002209969.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082398.1;locus_tag=YPIP275_RS08085;product=biosynthetic arginine decarboxylase;protein_id=WP_002209969.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 157845 158006 . - . ID=gene-YPIP275_RS29200;Name=yqgG;gbkey=Gene;gene=yqgG;gene_biotype=protein_coding;locus_tag=YPIP275_RS29200 NZ_AAOS02000007.1 Protein Homology CDS 157845 158006 . - 0 ID=cds-WP_418872362.1;Parent=gene-YPIP275_RS29200;Dbxref=GenBank:WP_418872362.1;Name=WP_418872362.1;gbkey=CDS;gene=yqgG;inference=COORDINATES: protein motif:HMM:NF048138.2;locus_tag=YPIP275_RS29200;product=small protein YqgG;protein_id=WP_418872362.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 158824 159978 . + . ID=gene-YPIP275_RS08090;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=YPIP275_RS08090;old_locus_tag=YPIP275_4412 NZ_AAOS02000007.1 Protein Homology CDS 158824 159978 . + 0 ID=cds-WP_002209971.1;Parent=gene-YPIP275_RS08090;Dbxref=GenBank:WP_002209971.1;Name=WP_002209971.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=YPIP275_RS08090;product=methionine adenosyltransferase;protein_id=WP_002209971.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 160171 160683 . + . ID=gene-YPIP275_RS08095;Name=YPIP275_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08095;old_locus_tag=YPIP275_4413 NZ_AAOS02000007.1 Protein Homology CDS 160171 160683 . + 0 ID=cds-WP_002228059.1;Parent=gene-YPIP275_RS08095;Dbxref=GenBank:WP_002228059.1;Name=WP_002228059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228059.1;locus_tag=YPIP275_RS08095;product=SprT family zinc-dependent metalloprotease;protein_id=WP_002228059.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 160781 161488 . + . ID=gene-YPIP275_RS08100;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08100;old_locus_tag=YPIP275_4414 NZ_AAOS02000007.1 Protein Homology CDS 160781 161488 . + 0 ID=cds-WP_002209973.1;Parent=gene-YPIP275_RS08100;Dbxref=GenBank:WP_002209973.1;Name=WP_002209973.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209973.1;locus_tag=YPIP275_RS08100;product=deoxyribonuclease I;protein_id=WP_002209973.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 161740 162471 . + . ID=gene-YPIP275_RS08105;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=YPIP275_RS08105;old_locus_tag=YPIP275_4416 NZ_AAOS02000007.1 Protein Homology CDS 161740 162471 . + 0 ID=cds-WP_002209975.1;Parent=gene-YPIP275_RS08105;Dbxref=GenBank:WP_002209975.1;Name=WP_002209975.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=YPIP275_RS08105;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_002209975.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 162497 163456 . + . ID=gene-YPIP275_RS08110;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=YPIP275_RS08110;old_locus_tag=YPIP275_4417 NZ_AAOS02000007.1 Protein Homology CDS 162497 163456 . + 0 ID=cds-WP_002209976.1;Parent=gene-YPIP275_RS08110;Dbxref=GenBank:WP_002209976.1;Name=WP_002209976.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209976.1;locus_tag=YPIP275_RS08110;product=glutathione synthase;protein_id=WP_002209976.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 163572 164135 . + . ID=gene-YPIP275_RS08115;Name=YPIP275_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08115;old_locus_tag=YPIP275_4418 NZ_AAOS02000007.1 Protein Homology CDS 163572 164135 . + 0 ID=cds-WP_002209977.1;Parent=gene-YPIP275_RS08115;Dbxref=GenBank:WP_002209977.1;Name=WP_002209977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015841840.1;locus_tag=YPIP275_RS08115;product=YqgE/AlgH family protein;protein_id=WP_002209977.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 164135 164557 . + . ID=gene-YPIP275_RS08120;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=YPIP275_RS08120;old_locus_tag=YPIP275_4419 NZ_AAOS02000007.1 Protein Homology CDS 164135 164557 . + 0 ID=cds-WP_002209978.1;Parent=gene-YPIP275_RS08120;Dbxref=GenBank:WP_002209978.1;Name=WP_002209978.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209978.1;locus_tag=YPIP275_RS08120;product=Holliday junction resolvase RuvX;protein_id=WP_002209978.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 164737 165621 . + . ID=gene-YPIP275_RS08125;Name=aguB;gbkey=Gene;gene=aguB;gene_biotype=protein_coding;locus_tag=YPIP275_RS08125;old_locus_tag=YPIP275_4420 NZ_AAOS02000007.1 Protein Homology CDS 164737 165621 . + 0 ID=cds-WP_002209979.1;Parent=gene-YPIP275_RS08125;Dbxref=GenBank:WP_002209979.1;Name=WP_002209979.1;Ontology_term=GO:0009446,GO:0050126,GO:0005737;gbkey=CDS;gene=aguB;go_component=cytoplasm|0005737||IEA;go_function=N-carbamoylputrescine amidase activity|0050126||IEA;go_process=putrescine biosynthetic process|0009446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005192514.1;locus_tag=YPIP275_RS08125;product=N-carbamoylputrescine amidase;protein_id=WP_002209979.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 165625 166740 . + . ID=gene-YPIP275_RS08130;Name=aguA;gbkey=Gene;gene=aguA;gene_biotype=protein_coding;locus_tag=YPIP275_RS08130;old_locus_tag=YPIP275_4421 NZ_AAOS02000007.1 Protein Homology CDS 165625 166740 . + 0 ID=cds-WP_002209980.1;Parent=gene-YPIP275_RS08130;Dbxref=GenBank:WP_002209980.1;Name=WP_002209980.1;Ontology_term=GO:0009446,GO:0047632,GO:0005737;gbkey=CDS;gene=aguA;go_component=cytoplasm|0005737||IEA;go_function=agmatine deiminase activity|0047632||IEA;go_process=putrescine biosynthetic process|0009446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413934.1;locus_tag=YPIP275_RS08130;product=agmatine deiminase;protein_id=WP_002209980.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 166849 167973 . - . ID=gene-YPIP275_RS08135;Name=YPIP275_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08135;old_locus_tag=YPIP275_4422 NZ_AAOS02000007.1 Protein Homology CDS 166849 167973 . - 0 ID=cds-WP_002209981.1;Parent=gene-YPIP275_RS08135;Dbxref=GenBank:WP_002209981.1;Name=WP_002209981.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209981.1;locus_tag=YPIP275_RS08135;product=type IV pilus twitching motility protein PilT;protein_id=WP_002209981.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 167993 168691 . + . ID=gene-YPIP275_RS08140;Name=YPIP275_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08140;old_locus_tag=YPIP275_4423 NZ_AAOS02000007.1 Protein Homology CDS 167993 168691 . + 0 ID=cds-WP_002215609.1;Parent=gene-YPIP275_RS08140;Dbxref=GenBank:WP_002215609.1;Name=WP_002215609.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215609.1;locus_tag=YPIP275_RS08140;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_002215609.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 168824 169645 . + . ID=gene-YPIP275_RS08145;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=YPIP275_RS08145;old_locus_tag=YPIP275_4424 NZ_AAOS02000007.1 Protein Homology CDS 168824 169645 . + 0 ID=cds-WP_002209983.1;Parent=gene-YPIP275_RS08145;Dbxref=GenBank:WP_002209983.1;Name=WP_002209983.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209983.1;locus_tag=YPIP275_RS08145;product=pyrroline-5-carboxylate reductase;protein_id=WP_002209983.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 169933 170487 . + . ID=gene-YPIP275_RS08150;Name=YPIP275_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08150;old_locus_tag=YPIP275_4425 NZ_AAOS02000007.1 Protein Homology CDS 169933 170487 . + 0 ID=cds-WP_002209984.1;Parent=gene-YPIP275_RS08150;Dbxref=GenBank:WP_002209984.1;Name=WP_002209984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413935.1;locus_tag=YPIP275_RS08150;product=YggT family protein;protein_id=WP_002209984.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 170484 170774 . + . ID=gene-YPIP275_RS08155;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=YPIP275_RS08155;old_locus_tag=YPIP275_4426 NZ_AAOS02000007.1 Protein Homology CDS 170484 170774 . + 0 ID=cds-WP_002215612.1;Parent=gene-YPIP275_RS08155;Dbxref=GenBank:WP_002215612.1;Name=WP_002215612.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215612.1;locus_tag=YPIP275_RS08155;product=DUF167 family protein YggU;protein_id=WP_002215612.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 170874 171467 . + . ID=gene-YPIP275_RS08160;Name=YPIP275_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08160;old_locus_tag=YPIP275_4427 NZ_AAOS02000007.1 Protein Homology CDS 170874 171467 . + 0 ID=cds-WP_002215614.1;Parent=gene-YPIP275_RS08160;Dbxref=GenBank:WP_002215614.1;Name=WP_002215614.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095132.1;locus_tag=YPIP275_RS08160;product=XTP/dITP diphosphatase;protein_id=WP_002215614.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 171460 172590 . + . ID=gene-YPIP275_RS08165;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=YPIP275_RS08165;old_locus_tag=YPIP275_4428 NZ_AAOS02000007.1 Protein Homology CDS 171460 172590 . + 0 ID=cds-WP_002209987.1;Parent=gene-YPIP275_RS08165;Dbxref=GenBank:WP_002209987.1;Name=WP_002209987.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209987.1;locus_tag=YPIP275_RS08165;product=radical SAM family heme chaperone HemW;protein_id=WP_002209987.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 172780 182112 . - . ID=gene-YPIP275_RS08170;Name=YPIP275_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08170;old_locus_tag=YPIP275_4429 NZ_AAOS02000007.1 Protein Homology CDS 172780 182112 . - 0 ID=cds-WP_002224905.1;Parent=gene-YPIP275_RS08170;Dbxref=GenBank:WP_002224905.1;Name=WP_002224905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906173.1;locus_tag=YPIP275_RS08170;product=C80 family cysteine peptidase;protein_id=WP_002224905.1;transl_table=11 NZ_AAOS02000007.1 RefSeq pseudogene 182611 183344 . - . ID=gene-YPIP275_RS08180;Name=YPIP275_RS08180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS08180;old_locus_tag=YPIP275_4430;pseudo=true NZ_AAOS02000007.1 Protein Homology CDS 182611 183344 . - 0 ID=cds-YPIP275_RS08180;Parent=gene-YPIP275_RS08180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303643.1;locus_tag=YPIP275_RS08180;product=YggN family protein;pseudo=true;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 183456 184382 . - . ID=gene-YPIP275_RS08185;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=YPIP275_RS08185;old_locus_tag=YPIP275_4431 NZ_AAOS02000007.1 Protein Homology CDS 183456 184382 . - 0 ID=cds-WP_002209989.1;Parent=gene-YPIP275_RS08185;Dbxref=GenBank:WP_002209989.1;Name=WP_002209989.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104660.1;locus_tag=YPIP275_RS08185;product=glutaminase B;protein_id=WP_002209989.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 184493 184819 . - . ID=gene-YPIP275_RS08190;Name=YPIP275_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08190;old_locus_tag=YPIP275_4432 NZ_AAOS02000007.1 Protein Homology CDS 184493 184819 . - 0 ID=cds-WP_002209990.1;Parent=gene-YPIP275_RS08190;Dbxref=GenBank:WP_002209990.1;Name=WP_002209990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417434.4;locus_tag=YPIP275_RS08190;product=YggL family protein;protein_id=WP_002209990.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 184819 185538 . - . ID=gene-YPIP275_RS08195;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=YPIP275_RS08195;old_locus_tag=YPIP275_4433 NZ_AAOS02000007.1 Protein Homology CDS 184819 185538 . - 0 ID=cds-WP_002209991.1;Parent=gene-YPIP275_RS08195;Dbxref=GenBank:WP_002209991.1;Name=WP_002209991.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706850.1;locus_tag=YPIP275_RS08195;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_002209991.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 185876 186991 . + . ID=gene-YPIP275_RS08200;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=YPIP275_RS08200;old_locus_tag=YPIP275_4435 NZ_AAOS02000007.1 Protein Homology CDS 185876 186991 . + 0 ID=cds-WP_002228057.1;Parent=gene-YPIP275_RS08200;Dbxref=GenBank:WP_002228057.1;Name=WP_002228057.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192982.1;locus_tag=YPIP275_RS08200;product=A/G-specific adenine glycosylase;protein_id=WP_002228057.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 187169 187441 . + . ID=gene-YPIP275_RS08205;Name=YPIP275_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08205;old_locus_tag=YPIP275_4436 NZ_AAOS02000007.1 Protein Homology CDS 187169 187441 . + 0 ID=cds-WP_002209994.1;Parent=gene-YPIP275_RS08205;Dbxref=GenBank:WP_002209994.1;Name=WP_002209994.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005192570.1;locus_tag=YPIP275_RS08205;product=oxidative damage protection protein;protein_id=WP_002209994.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 187624 188700 . + . ID=gene-YPIP275_RS08210;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=YPIP275_RS08210;old_locus_tag=YPIP275_4437 NZ_AAOS02000007.1 Protein Homology CDS 187624 188700 . + 0 ID=cds-WP_002209995.1;Parent=gene-YPIP275_RS08210;Dbxref=GenBank:WP_002209995.1;Name=WP_002209995.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279448.1;locus_tag=YPIP275_RS08210;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_002209995.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 189000 190100 . + . ID=gene-YPIP275_RS08215;Name=YPIP275_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08215;old_locus_tag=YPIP275_4439 NZ_AAOS02000007.1 Protein Homology CDS 189000 190100 . + 0 ID=cds-WP_002209997.1;Parent=gene-YPIP275_RS08215;Dbxref=GenBank:WP_002209997.1;Name=WP_002209997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209997.1;locus_tag=YPIP275_RS08215;product=ABC transporter substrate-binding protein;protein_id=WP_002209997.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 190204 192237 . + . ID=gene-YPIP275_RS08220;Name=YPIP275_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08220;old_locus_tag=YPIP275_4440 NZ_AAOS02000007.1 Protein Homology CDS 190204 192237 . + 0 ID=cds-WP_002209998.1;Parent=gene-YPIP275_RS08220;Dbxref=GenBank:WP_002209998.1;Name=WP_002209998.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209998.1;locus_tag=YPIP275_RS08220;product=TonB-dependent siderophore receptor;protein_id=WP_002209998.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 192320 193303 . - . ID=gene-YPIP275_RS08225;Name=YPIP275_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08225;old_locus_tag=YPIP275_4441 NZ_AAOS02000007.1 Protein Homology CDS 192320 193303 . - 0 ID=cds-WP_002209999.1;Parent=gene-YPIP275_RS08225;Dbxref=GenBank:WP_002209999.1;Name=WP_002209999.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209999.1;locus_tag=YPIP275_RS08225;product=ABC transporter permease;protein_id=WP_002209999.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 193336 194835 . - . ID=gene-YPIP275_RS08230;Name=YPIP275_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08230;old_locus_tag=YPIP275_4442 NZ_AAOS02000007.1 Protein Homology CDS 193336 194835 . - 0 ID=cds-WP_002210000.1;Parent=gene-YPIP275_RS08230;Dbxref=GenBank:WP_002210000.1;Name=WP_002210000.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210000.1;locus_tag=YPIP275_RS08230;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002210000.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 194881 195840 . - . ID=gene-YPIP275_RS08235;Name=YPIP275_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08235;old_locus_tag=YPIP275_4443 NZ_AAOS02000007.1 Protein Homology CDS 194881 195840 . - 0 ID=cds-WP_002210001.1;Parent=gene-YPIP275_RS08235;Dbxref=GenBank:WP_002210001.1;Name=WP_002210001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104655.1;locus_tag=YPIP275_RS08235;product=substrate-binding domain-containing protein;protein_id=WP_002210001.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 196396 198558 . - . ID=gene-YPIP275_RS08240;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=YPIP275_RS08240;old_locus_tag=YPIP275_4444 NZ_AAOS02000007.1 Protein Homology CDS 196396 198558 . - 0 ID=cds-WP_002210002.1;Parent=gene-YPIP275_RS08240;Dbxref=GenBank:WP_002210002.1;Name=WP_002210002.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104654.1;locus_tag=YPIP275_RS08240;product=ornithine decarboxylase SpeF;protein_id=WP_002210002.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 199227 199301 . + . ID=gene-YPIP275_RS08245;Name=YPIP275_RS08245;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS08245;old_locus_tag=YPIP275_4446 NZ_AAOS02000007.1 tRNAscan-SE tRNA 199227 199301 . + . ID=rna-YPIP275_RS08245;Parent=gene-YPIP275_RS08245;anticodon=(pos:199259..199261);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS08245;product=tRNA-Phe NZ_AAOS02000007.1 tRNAscan-SE exon 199227 199301 . + . ID=exon-YPIP275_RS08245-1;Parent=rna-YPIP275_RS08245;anticodon=(pos:199259..199261);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS08245;product=tRNA-Phe NZ_AAOS02000007.1 RefSeq pseudogene 199554 199859 . - . ID=gene-YPIP275_RS08250;Name=YPIP275_RS08250;end_range=199859,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS08250;partial=true;pseudo=true NZ_AAOS02000007.1 Protein Homology CDS 199554 199859 . - 0 ID=cds-YPIP275_RS08250;Parent=gene-YPIP275_RS08250;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=199859,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817054.1;locus_tag=YPIP275_RS08250;partial=true;product=site-specific integrase;pseudo=true;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 199886 200521 . - . ID=gene-YPIP275_RS08255;Name=YPIP275_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08255;old_locus_tag=YPIP275_4448 NZ_AAOS02000007.1 Protein Homology CDS 199886 200521 . - 0 ID=cds-WP_002210005.1;Parent=gene-YPIP275_RS08255;Dbxref=GenBank:WP_002210005.1;Name=WP_002210005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210005.1;locus_tag=YPIP275_RS08255;product=DUF2345 domain-containing protein;protein_id=WP_002210005.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 201129 201826 . - . ID=gene-YPIP275_RS28555;Name=YPIP275_RS28555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28555 NZ_AAOS02000007.1 Protein Homology CDS 201577 201826 . - 0 ID=cds-WP_086016632.1;Parent=gene-YPIP275_RS28555;Dbxref=GenBank:WP_086016632.1;Name=WP_086016632.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611160.1;locus_tag=YPIP275_RS28555;product=IS1-like element ISYps7 family transposase;protein_id=WP_086016632.1;transl_table=11 NZ_AAOS02000007.1 Protein Homology CDS 201129 201577 . - 2 ID=cds-WP_086016632.1;Parent=gene-YPIP275_RS28555;Dbxref=GenBank:WP_086016632.1;Name=WP_086016632.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611160.1;locus_tag=YPIP275_RS28555;product=IS1-like element ISYps7 family transposase;protein_id=WP_086016632.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 201922 202689 . - . ID=gene-YPIP275_RS08270;Name=YPIP275_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08270;old_locus_tag=YPIP275_4451 NZ_AAOS02000007.1 Protein Homology CDS 201922 202689 . - 0 ID=cds-WP_002210008.1;Parent=gene-YPIP275_RS08270;Dbxref=GenBank:WP_002210008.1;Name=WP_002210008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413945.1;locus_tag=YPIP275_RS08270;product=hypothetical protein;protein_id=WP_002210008.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 202676 204973 . - . ID=gene-YPIP275_RS08275;Name=YPIP275_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08275;old_locus_tag=YPIP275_4452 NZ_AAOS02000007.1 Protein Homology CDS 202676 204973 . - 0 ID=cds-WP_002210009.1;Parent=gene-YPIP275_RS08275;Dbxref=GenBank:WP_002210009.1;Name=WP_002210009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104590.1;locus_tag=YPIP275_RS08275;product=M23 family metallopeptidase;protein_id=WP_002210009.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 204989 205624 . - . ID=gene-YPIP275_RS08280;Name=YPIP275_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08280;old_locus_tag=YPIP275_4453 NZ_AAOS02000007.1 Protein Homology CDS 204989 205624 . - 0 ID=cds-WP_002210010.1;Parent=gene-YPIP275_RS08280;Dbxref=GenBank:WP_002210010.1;Name=WP_002210010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210005.1;locus_tag=YPIP275_RS08280;product=DUF2345 domain-containing protein;protein_id=WP_002210010.1;transl_table=11 NZ_AAOS02000007.1 RefSeq pseudogene 206247 206820 . - . ID=gene-YPIP275_RS28560;Name=YPIP275_RS28560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28560;partial=true;pseudo=true;start_range=.,206247 NZ_AAOS02000007.1 Protein Homology CDS 206247 206820 . - 0 ID=cds-YPIP275_RS28560;Parent=gene-YPIP275_RS28560;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611160.1;locus_tag=YPIP275_RS28560;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,206247;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 206849 207043 . - . ID=gene-YPIP275_RS08295;Name=YPIP275_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08295 NZ_AAOS02000007.1 Protein Homology CDS 206849 207043 . - 0 ID=cds-WP_002216110.1;Parent=gene-YPIP275_RS08295;Dbxref=GenBank:WP_002216110.1;Name=WP_002216110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216110.1;locus_tag=YPIP275_RS08295;product=hypothetical protein;protein_id=WP_002216110.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 207217 207564 . - . ID=gene-YPIP275_RS08300;Name=YPIP275_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08300 NZ_AAOS02000007.1 Protein Homology CDS 207217 207564 . - 0 ID=cds-WP_016590715.1;Parent=gene-YPIP275_RS08300;Dbxref=GenBank:WP_016590715.1;Name=WP_016590715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257642.1;locus_tag=YPIP275_RS08300;product=hypothetical protein;protein_id=WP_016590715.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 207708 209930 . - . ID=gene-YPIP275_RS08305;Name=YPIP275_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08305;old_locus_tag=YPIP275_4457 NZ_AAOS02000007.1 Protein Homology CDS 207708 209930 . - 0 ID=cds-WP_002210011.1;Parent=gene-YPIP275_RS08305;Dbxref=GenBank:WP_002210011.1;Name=WP_002210011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210011.1;locus_tag=YPIP275_RS08305;product=M23 family metallopeptidase;protein_id=WP_002210011.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 209945 212293 . - . ID=gene-YPIP275_RS08310;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=YPIP275_RS08310;old_locus_tag=YPIP275_4458 NZ_AAOS02000007.1 Protein Homology CDS 209945 212293 . - 0 ID=cds-WP_002210012.1;Parent=gene-YPIP275_RS08310;Dbxref=GenBank:WP_002210012.1;Name=WP_002210012.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683911.1;locus_tag=YPIP275_RS08310;product=type VI secretion system tip protein VgrG;protein_id=WP_002210012.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 212290 214938 . - . ID=gene-YPIP275_RS08315;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=YPIP275_RS08315;old_locus_tag=YPIP275_4459 NZ_AAOS02000007.1 Protein Homology CDS 212290 214938 . - 0 ID=cds-WP_002210013.1;Parent=gene-YPIP275_RS08315;Dbxref=GenBank:WP_002210013.1;Name=WP_002210013.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012228902.1;locus_tag=YPIP275_RS08315;product=type VI secretion system ATPase TssH;protein_id=WP_002210013.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 215356 215847 . - . ID=gene-YPIP275_RS08320;Name=YPIP275_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08320;old_locus_tag=YPIP275_4460 NZ_AAOS02000007.1 Protein Homology CDS 215356 215847 . - 0 ID=cds-WP_002210014.1-2;Parent=gene-YPIP275_RS08320;Dbxref=GenBank:WP_002210014.1;Name=WP_002210014.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226602.1;locus_tag=YPIP275_RS08320;product=Hcp family type VI secretion system effector;protein_id=WP_002210014.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 215851 217587 . - . ID=gene-YPIP275_RS08325;Name=YPIP275_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS08325;old_locus_tag=YPIP275_4461 NZ_AAOS02000007.1 Protein Homology CDS 215851 217587 . - 0 ID=cds-WP_002228049.1;Parent=gene-YPIP275_RS08325;Dbxref=GenBank:WP_002228049.1;Name=WP_002228049.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683668.1;locus_tag=YPIP275_RS08325;product=OmpA family protein;protein_id=WP_002228049.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 217587 218273 . - . ID=gene-YPIP275_RS08330;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=YPIP275_RS08330;old_locus_tag=YPIP275_4462 NZ_AAOS02000007.1 Protein Homology CDS 217587 218273 . - 0 ID=cds-WP_002210015.1-5;Parent=gene-YPIP275_RS08330;Dbxref=GenBank:WP_002210015.1;Name=WP_002210015.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104585.1;locus_tag=YPIP275_RS08330;product=type VI secretion system protein TssL%2C short form;protein_id=WP_002210015.1;transl_table=11 NZ_AAOS02000007.1 RefSeq gene 218270 219376 . - . ID=gene-YPIP275_RS08335;Name=tssK;end_range=219376,.;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=YPIP275_RS08335;old_locus_tag=YPIP275_4463;partial=true NZ_AAOS02000007.1 Protein Homology CDS 218270 219376 . - 0 ID=cds-WP_002210016.1-3;Parent=gene-YPIP275_RS08335;Dbxref=GenBank:WP_002210016.1;Name=WP_002210016.1;Ontology_term=GO:0033103;end_range=219376,.;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213011.1;locus_tag=YPIP275_RS08335;partial=true;product=type VI secretion system baseplate subunit TssK;protein_id=WP_002210016.1;transl_table=11 ##sequence-region NZ_AAOS02000006.1 1 229733 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000006.1 RefSeq region 1 229733 . + . ID=NZ_AAOS02000006.1:1..229733;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000006.1 RefSeq gene 186 428 . + . ID=gene-YPIP275_RS06235;Name=YPIP275_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06235;old_locus_tag=YPIP275_1841 NZ_AAOS02000006.1 Protein Homology CDS 186 428 . + 0 ID=cds-WP_002209646.1;Parent=gene-YPIP275_RS06235;Dbxref=GenBank:WP_002209646.1;Name=WP_002209646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209646.1;locus_tag=YPIP275_RS06235;product=hypothetical protein;protein_id=WP_002209646.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 556 984 . - . ID=gene-YPIP275_RS06240;Name=YPIP275_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06240;old_locus_tag=YPIP275_1842 NZ_AAOS02000006.1 Protein Homology CDS 556 984 . - 0 ID=cds-WP_002209647.1;Parent=gene-YPIP275_RS06240;Dbxref=GenBank:WP_002209647.1;Name=WP_002209647.1;Ontology_term=GO:0055085,GO:0005215,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004721874.1;locus_tag=YPIP275_RS06240;product=EamA family transporter;protein_id=WP_002209647.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 1079 1765 . - . ID=gene-YPIP275_RS06245;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=YPIP275_RS06245;old_locus_tag=YPIP275_1843 NZ_AAOS02000006.1 Protein Homology CDS 1079 1765 . - 0 ID=cds-WP_029562574.1;Parent=gene-YPIP275_RS06245;Dbxref=GenBank:WP_029562574.1;Name=WP_029562574.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167966.1;locus_tag=YPIP275_RS06245;product=two-component system response regulator KdpE;protein_id=WP_029562574.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 2001 4727 . - . ID=gene-YPIP275_RS06250;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=YPIP275_RS06250;old_locus_tag=YPIP275_1844 NZ_AAOS02000006.1 Protein Homology CDS 2001 4727 . - 0 ID=cds-WP_002209649.1;Parent=gene-YPIP275_RS06250;Dbxref=GenBank:WP_002209649.1;Name=WP_002209649.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256711.1;locus_tag=YPIP275_RS06250;product=two-component system sensor histidine kinase KdpD;protein_id=WP_002209649.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 4737 5339 . - . ID=gene-YPIP275_RS06255;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=YPIP275_RS06255;old_locus_tag=YPIP275_1845 NZ_AAOS02000006.1 Protein Homology CDS 4737 5339 . - 0 ID=cds-WP_002216363.1;Parent=gene-YPIP275_RS06255;Dbxref=GenBank:WP_002216363.1;Name=WP_002216363.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216363.1;locus_tag=YPIP275_RS06255;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_002216363.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 5551 7617 . - . ID=gene-YPIP275_RS06260;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=YPIP275_RS06260;old_locus_tag=YPIP275_1846 NZ_AAOS02000006.1 Protein Homology CDS 5551 7617 . - 0 ID=cds-WP_002209651.1;Parent=gene-YPIP275_RS06260;Dbxref=GenBank:WP_002209651.1;Name=WP_002209651.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192833.1;locus_tag=YPIP275_RS06260;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_002209651.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 7711 9399 . - . ID=gene-YPIP275_RS06265;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06265;old_locus_tag=YPIP275_1847 NZ_AAOS02000006.1 Protein Homology CDS 7711 9399 . - 0 ID=cds-WP_002209652.1;Parent=gene-YPIP275_RS06265;Dbxref=GenBank:WP_002209652.1;Name=WP_002209652.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104772.1;locus_tag=YPIP275_RS06265;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_002209652.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 9400 9489 . - . ID=gene-YPIP275_RS06270;Name=YPIP275_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06270 NZ_AAOS02000006.1 Protein Homology CDS 9400 9489 . - 0 ID=cds-WP_002216016.1;Parent=gene-YPIP275_RS06270;Dbxref=GenBank:WP_002216016.1;Name=WP_002216016.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02115.1;locus_tag=YPIP275_RS06270;product=K(+)-transporting ATPase subunit F;protein_id=WP_002216016.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 9486 9728 . - . ID=gene-YPIP275_RS06275;Name=YPIP275_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06275 NZ_AAOS02000006.1 Protein Homology CDS 9486 9728 . - 0 ID=cds-WP_002216017.1;Parent=gene-YPIP275_RS06275;Dbxref=GenBank:WP_002216017.1;Name=WP_002216017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216017.1;locus_tag=YPIP275_RS06275;product=hypothetical protein;protein_id=WP_002216017.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 9894 10100 . + . ID=gene-YPIP275_RS06280;Name=YPIP275_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06280;old_locus_tag=YPIP275_1848 NZ_AAOS02000006.1 Protein Homology CDS 9894 10100 . + 0 ID=cds-WP_002209653.1;Parent=gene-YPIP275_RS06280;Dbxref=GenBank:WP_002209653.1;Name=WP_002209653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209653.1;locus_tag=YPIP275_RS06280;product=YbfA family protein;protein_id=WP_002209653.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 10439 10921 . + . ID=gene-YPIP275_RS06285;Name=YPIP275_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06285;old_locus_tag=YPIP275_1849 NZ_AAOS02000006.1 Protein Homology CDS 10439 10921 . + 0 ID=cds-WP_002209654.1;Parent=gene-YPIP275_RS06285;Dbxref=GenBank:WP_002209654.1;Name=WP_002209654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209654.1;locus_tag=YPIP275_RS06285;product=YbgA family protein;protein_id=WP_002209654.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 11051 12514 . + . ID=gene-YPIP275_RS06290;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=YPIP275_RS06290;old_locus_tag=YPIP275_1850 NZ_AAOS02000006.1 Protein Homology CDS 11051 12514 . + 0 ID=cds-WP_002209655.1;Parent=gene-YPIP275_RS06290;Dbxref=GenBank:WP_002209655.1;Name=WP_002209655.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354509.1;locus_tag=YPIP275_RS06290;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_002209655.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 12505 13542 . + . ID=gene-YPIP275_RS06295;Name=YPIP275_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06295;old_locus_tag=YPIP275_1851 NZ_AAOS02000006.1 Protein Homology CDS 12505 13542 . + 0 ID=cds-WP_002209656.1;Parent=gene-YPIP275_RS06295;Dbxref=GenBank:WP_002209656.1;Name=WP_002209656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229978.1;locus_tag=YPIP275_RS06295;product=MBL fold metallo-hydrolase;protein_id=WP_002209656.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 13668 14411 . + . ID=gene-YPIP275_RS06300;Name=YPIP275_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06300;old_locus_tag=YPIP275_1852 NZ_AAOS02000006.1 Protein Homology CDS 13668 14411 . + 0 ID=cds-WP_002354507.1;Parent=gene-YPIP275_RS06300;Dbxref=GenBank:WP_002354507.1;Name=WP_002354507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354507.1;locus_tag=YPIP275_RS06300;product=type 2 GTP cyclohydrolase I;protein_id=WP_002354507.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 14496 14651 . - . ID=gene-YPIP275_RS28505;Name=YPIP275_RS28505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28505 NZ_AAOS02000006.1 Protein Homology CDS 14496 14651 . - 0 ID=cds-WP_002225777.1;Parent=gene-YPIP275_RS28505;Dbxref=GenBank:WP_002225777.1;Name=WP_002225777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002225777.1;locus_tag=YPIP275_RS28505;product=hypothetical protein;protein_id=WP_002225777.1;transl_table=11 NZ_AAOS02000006.1 RefSeq pseudogene 15030 15686 . + . ID=gene-YPIP275_RS06305;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=pseudogene;locus_tag=YPIP275_RS06305;old_locus_tag=YPIP275_1853;pseudo=true NZ_AAOS02000006.1 Protein Homology CDS 15030 15686 . + 0 ID=cds-YPIP275_RS06305;Parent=gene-YPIP275_RS06305;Note=internal stop;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192830.1;locus_tag=YPIP275_RS06305;product=5-oxoprolinase subunit PxpB;pseudo=true;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 15680 16630 . + . ID=gene-YPIP275_RS06310;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=YPIP275_RS06310;old_locus_tag=YPIP275_1854 NZ_AAOS02000006.1 Protein Homology CDS 15680 16630 . + 0 ID=cds-WP_002209658.1;Parent=gene-YPIP275_RS06310;Dbxref=GenBank:WP_002209658.1;Name=WP_002209658.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209658.1;locus_tag=YPIP275_RS06310;product=5-oxoprolinase subunit PxpC;protein_id=WP_002209658.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 16627 17364 . + . ID=gene-YPIP275_RS06315;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06315;old_locus_tag=YPIP275_1855 NZ_AAOS02000006.1 Protein Homology CDS 16627 17364 . + 0 ID=cds-WP_002209659.1;Parent=gene-YPIP275_RS06315;Dbxref=GenBank:WP_002209659.1;Name=WP_002209659.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209659.1;locus_tag=YPIP275_RS06315;product=5-oxoprolinase subunit PxpA;protein_id=WP_002209659.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 17449 18180 . + . ID=gene-YPIP275_RS06320;Name=YPIP275_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06320;old_locus_tag=YPIP275_1856 NZ_AAOS02000006.1 Protein Homology CDS 17449 18180 . + 0 ID=cds-WP_002209660.1;Parent=gene-YPIP275_RS06320;Dbxref=GenBank:WP_002209660.1;Name=WP_002209660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715773.1;locus_tag=YPIP275_RS06320;product=DUF969 domain-containing protein;protein_id=WP_002209660.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 18177 19196 . + . ID=gene-YPIP275_RS06325;Name=YPIP275_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06325;old_locus_tag=YPIP275_1857 NZ_AAOS02000006.1 Protein Homology CDS 18177 19196 . + 0 ID=cds-WP_002209661.1;Parent=gene-YPIP275_RS06325;Dbxref=GenBank:WP_002209661.1;Name=WP_002209661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225859.1;locus_tag=YPIP275_RS06325;product=DUF979 domain-containing protein;protein_id=WP_002209661.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 19206 19853 . + . ID=gene-YPIP275_RS06330;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=YPIP275_RS06330;old_locus_tag=YPIP275_1858 NZ_AAOS02000006.1 Protein Homology CDS 19206 19853 . + 0 ID=cds-WP_002209662.1;Parent=gene-YPIP275_RS06330;Dbxref=GenBank:WP_002209662.1;Name=WP_002209662.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209662.1;locus_tag=YPIP275_RS06330;product=pyroglutamyl-peptidase I;protein_id=WP_002209662.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 19944 20630 . - . ID=gene-YPIP275_RS06335;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=YPIP275_RS06335;old_locus_tag=YPIP275_1859 NZ_AAOS02000006.1 Protein Homology CDS 19944 20630 . - 0 ID=cds-WP_002209663.1;Parent=gene-YPIP275_RS06335;Dbxref=GenBank:WP_002209663.1;Name=WP_002209663.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209663.1;locus_tag=YPIP275_RS06335;product=uracil-DNA glycosylase;protein_id=WP_002209663.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 20983 21366 . + . ID=gene-YPIP275_RS06340;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06340;old_locus_tag=YPIP275_1860 NZ_AAOS02000006.1 Protein Homology CDS 20983 21366 . + 0 ID=cds-WP_002209664.1;Parent=gene-YPIP275_RS06340;Dbxref=GenBank:WP_002209664.1;Name=WP_002209664.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=YPIP275_RS06340;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_002209664.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 21545 22507 . + . ID=gene-YPIP275_RS06345;Name=YPIP275_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06345;old_locus_tag=YPIP275_1861 NZ_AAOS02000006.1 Protein Homology CDS 21545 22507 . + 0 ID=cds-WP_002209665.1;Parent=gene-YPIP275_RS06345;Dbxref=GenBank:WP_002209665.1;Name=WP_002209665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104780.1;locus_tag=YPIP275_RS06345;product=Tle-like phospholipase domain-containing protein;protein_id=WP_002209665.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 22585 23241 . + . ID=gene-YPIP275_RS06355;Name=YPIP275_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06355;old_locus_tag=YPIP275_1863 NZ_AAOS02000006.1 Protein Homology CDS 22585 23241 . + 0 ID=cds-WP_002209667.1;Parent=gene-YPIP275_RS06355;Dbxref=GenBank:WP_002209667.1;Name=WP_002209667.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209667.1;locus_tag=YPIP275_RS06355;product=ankyrin repeat domain-containing protein;protein_id=WP_002209667.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 23372 24697 . - . ID=gene-YPIP275_RS06360;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=YPIP275_RS06360;old_locus_tag=YPIP275_1865 NZ_AAOS02000006.1 Protein Homology CDS 23372 24697 . - 0 ID=cds-WP_002209669.1;Parent=gene-YPIP275_RS06360;Dbxref=GenBank:WP_002209669.1;Name=WP_002209669.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390505.1;locus_tag=YPIP275_RS06360;product=ATP-dependent RNA helicase SrmB;protein_id=WP_002209669.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 24949 25695 . + . ID=gene-YPIP275_RS06365;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=YPIP275_RS06365;old_locus_tag=YPIP275_1866 NZ_AAOS02000006.1 Protein Homology CDS 24949 25695 . + 0 ID=cds-WP_002209670.1;Parent=gene-YPIP275_RS06365;Dbxref=GenBank:WP_002209670.1;Name=WP_002209670.1;Ontology_term=GO:0030488,GO:0003676,GO:7770054;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA(Val) (adenine(37)-N6)-methyltransferase activity|7770054||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223364.1;locus_tag=YPIP275_RS06365;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_002209670.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 25978 27579 . - . ID=gene-YPIP275_RS06370;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=YPIP275_RS06370;old_locus_tag=YPIP275_1867 NZ_AAOS02000006.1 Protein Homology CDS 25978 27579 . - 0 ID=cds-WP_002209671.1;Parent=gene-YPIP275_RS06370;Dbxref=GenBank:WP_002209671.1;Name=WP_002209671.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209671.1;locus_tag=YPIP275_RS06370;product=L-aspartate oxidase;protein_id=WP_002209671.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 27803 28378 . + . ID=gene-YPIP275_RS06375;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=YPIP275_RS06375;old_locus_tag=YPIP275_1868 NZ_AAOS02000006.1 Protein Homology CDS 27803 28378 . + 0 ID=cds-WP_002209672.1;Parent=gene-YPIP275_RS06375;Dbxref=GenBank:WP_002209672.1;Name=WP_002209672.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=YPIP275_RS06375;product=RNA polymerase sigma factor RpoE;protein_id=WP_002209672.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 28404 29060 . + . ID=gene-YPIP275_RS06380;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06380;old_locus_tag=YPIP275_1869 NZ_AAOS02000006.1 Protein Homology CDS 28404 29060 . + 0 ID=cds-WP_002209673.1;Parent=gene-YPIP275_RS06380;Dbxref=GenBank:WP_002209673.1;Name=WP_002209673.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005172760.1;locus_tag=YPIP275_RS06380;product=anti-sigma-E factor RseA;protein_id=WP_002209673.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 29060 30016 . + . ID=gene-YPIP275_RS06385;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=YPIP275_RS06385;old_locus_tag=YPIP275_1870 NZ_AAOS02000006.1 Protein Homology CDS 29060 30016 . + 0 ID=cds-WP_002209674.1;Parent=gene-YPIP275_RS06385;Dbxref=GenBank:WP_002209674.1;Name=WP_002209674.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209674.1;locus_tag=YPIP275_RS06385;product=sigma-E factor regulatory protein RseB;protein_id=WP_002209674.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 30013 30468 . + . ID=gene-YPIP275_RS06390;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=YPIP275_RS06390;old_locus_tag=YPIP275_1871 NZ_AAOS02000006.1 Protein Homology CDS 30013 30468 . + 0 ID=cds-WP_002209675.1;Parent=gene-YPIP275_RS06390;Dbxref=GenBank:WP_002209675.1;Name=WP_002209675.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209675.1;locus_tag=YPIP275_RS06390;product=SoxR-reducing system protein RseC;protein_id=WP_002209675.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 30489 31343 . - . ID=gene-YPIP275_RS06395;Name=YPIP275_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06395;old_locus_tag=YPIP275_1872 NZ_AAOS02000006.1 Protein Homology CDS 30489 31343 . - 0 ID=cds-WP_002209676.1;Parent=gene-YPIP275_RS06395;Dbxref=GenBank:WP_002209676.1;Name=WP_002209676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209676.1;locus_tag=YPIP275_RS06395;product=hypothetical protein;protein_id=WP_002209676.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 31843 33642 . + . ID=gene-YPIP275_RS06400;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06400;old_locus_tag=YPIP275_1873 NZ_AAOS02000006.1 Protein Homology CDS 31843 33642 . + 0 ID=cds-WP_002209677.1;Parent=gene-YPIP275_RS06400;Dbxref=GenBank:WP_002209677.1;Name=WP_002209677.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009088658.1;locus_tag=YPIP275_RS06400;product=translation elongation factor 4;protein_id=WP_002209677.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 33652 34650 . + . ID=gene-YPIP275_RS06405;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=YPIP275_RS06405;old_locus_tag=YPIP275_1874 NZ_AAOS02000006.1 Protein Homology CDS 33652 34650 . + 0 ID=cds-WP_002209678.1;Parent=gene-YPIP275_RS06405;Dbxref=GenBank:WP_002209678.1;Name=WP_002209678.1;Ontology_term=GO:0051604,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159411.1;locus_tag=YPIP275_RS06405;product=signal peptidase I;protein_id=WP_002209678.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 35002 35682 . + . ID=gene-YPIP275_RS06410;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=YPIP275_RS06410;old_locus_tag=YPIP275_1875 NZ_AAOS02000006.1 Protein Homology CDS 35002 35682 . + 0 ID=cds-WP_002209679.1;Parent=gene-YPIP275_RS06410;Dbxref=GenBank:WP_002209679.1;Name=WP_002209679.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=YPIP275_RS06410;product=ribonuclease III;protein_id=WP_002209679.1;transl_table=11 NZ_AAOS02000006.1 RefSeq pseudogene 35679 36591 . + . ID=gene-YPIP275_RS06415;Name=era;gbkey=Gene;gene=era;gene_biotype=pseudogene;locus_tag=YPIP275_RS06415;old_locus_tag=YPIP275_1876;pseudo=true NZ_AAOS02000006.1 Protein Homology CDS 35679 36591 . + 0 ID=cds-YPIP275_RS06415;Parent=gene-YPIP275_RS06415;Note=frameshifted;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214829.1;locus_tag=YPIP275_RS06415;product=GTPase Era;pseudo=true;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 36601 37326 . + . ID=gene-YPIP275_RS06420;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=YPIP275_RS06420;old_locus_tag=YPIP275_1877 NZ_AAOS02000006.1 Protein Homology CDS 36601 37326 . + 0 ID=cds-WP_002209680.1;Parent=gene-YPIP275_RS06420;Dbxref=GenBank:WP_002209680.1;Name=WP_002209680.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209680.1;locus_tag=YPIP275_RS06420;product=DNA repair protein RecO;protein_id=WP_002209680.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 37453 38475 . + . ID=gene-YPIP275_RS06425;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06425;old_locus_tag=YPIP275_1878 NZ_AAOS02000006.1 Protein Homology CDS 37453 38475 . + 0 ID=cds-WP_000255944.1-32;Parent=gene-YPIP275_RS06425;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS06425;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 38472 39254 . + . ID=gene-YPIP275_RS06430;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS06430;old_locus_tag=YPIP275_1879 NZ_AAOS02000006.1 Protein Homology CDS 38472 39254 . + 0 ID=cds-WP_001317493.1-38;Parent=gene-YPIP275_RS06430;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS06430;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000006.1 RefSeq pseudogene 39321 40106 . + . ID=gene-YPIP275_RS06435;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=pseudogene;locus_tag=YPIP275_RS06435;old_locus_tag=YPIP275_1880;partial=true;pseudo=true;start_range=.,39321 NZ_AAOS02000006.1 Protein Homology CDS 39321 40106 . + 0 ID=cds-YPIP275_RS06435;Parent=gene-YPIP275_RS06435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816670.1;locus_tag=YPIP275_RS06435;partial=true;product=type VI secretion system protein TssL%2C long form;pseudo=true;start_range=.,39321;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 40115 43942 . + . ID=gene-YPIP275_RS06440;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=YPIP275_RS06440;old_locus_tag=YPIP275_1881 NZ_AAOS02000006.1 Protein Homology CDS 40115 43942 . + 0 ID=cds-WP_002214843.1;Parent=gene-YPIP275_RS06440;Dbxref=GenBank:WP_002214843.1;Name=WP_002214843.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214843.1;locus_tag=YPIP275_RS06440;product=type VI secretion system membrane subunit TssM;protein_id=WP_002214843.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 44269 47019 . + . ID=gene-YPIP275_RS06445;Name=YPIP275_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06445;old_locus_tag=YPIP275_1882 NZ_AAOS02000006.1 Protein Homology CDS 44269 47019 . + 0 ID=cds-WP_002209683.1;Parent=gene-YPIP275_RS06445;Dbxref=GenBank:WP_002209683.1;Name=WP_002209683.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209683.1;locus_tag=YPIP275_RS06445;product=type VI secretion system Vgr family protein;protein_id=WP_002209683.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 47118 47378 . + . ID=gene-YPIP275_RS06450;Name=YPIP275_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06450;old_locus_tag=YPIP275_1883 NZ_AAOS02000006.1 Protein Homology CDS 47118 47378 . + 0 ID=cds-WP_002209684.1;Parent=gene-YPIP275_RS06450;Dbxref=GenBank:WP_002209684.1;Name=WP_002209684.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209684.1;locus_tag=YPIP275_RS06450;product=PAAR domain-containing protein;protein_id=WP_002209684.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 47384 48226 . + . ID=gene-YPIP275_RS06455;Name=YPIP275_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06455;old_locus_tag=YPIP275_1884 NZ_AAOS02000006.1 Protein Homology CDS 47384 48226 . + 0 ID=cds-WP_002354537.1;Parent=gene-YPIP275_RS06455;Dbxref=GenBank:WP_002354537.1;Name=WP_002354537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354537.1;locus_tag=YPIP275_RS06455;product=TagK domain-containing protein;protein_id=WP_002354537.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 48246 49052 . + . ID=gene-YPIP275_RS06460;Name=YPIP275_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06460;old_locus_tag=YPIP275_1885 NZ_AAOS02000006.1 Protein Homology CDS 48246 49052 . + 0 ID=cds-WP_002209685.1;Parent=gene-YPIP275_RS06460;Dbxref=GenBank:WP_002209685.1;Name=WP_002209685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209685.1;locus_tag=YPIP275_RS06460;product=type VI secretion system accessory protein TagJ;protein_id=WP_002209685.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 49149 49628 . + . ID=gene-YPIP275_RS06465;Name=YPIP275_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06465;old_locus_tag=YPIP275_1886 NZ_AAOS02000006.1 Protein Homology CDS 49149 49628 . + 0 ID=cds-WP_002209686.1;Parent=gene-YPIP275_RS06465;Dbxref=GenBank:WP_002209686.1;Name=WP_002209686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005168546.1;locus_tag=YPIP275_RS06465;product=type VI secretion system baseplate subunit TssE;protein_id=WP_002209686.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 49653 50000 . + . ID=gene-YPIP275_RS06470;Name=YPIP275_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06470;old_locus_tag=YPIP275_1887 NZ_AAOS02000006.1 Protein Homology CDS 49653 50000 . + 0 ID=cds-WP_002209687.1;Parent=gene-YPIP275_RS06470;Dbxref=GenBank:WP_002209687.1;Name=WP_002209687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209687.1;locus_tag=YPIP275_RS06470;product=hypothetical protein;protein_id=WP_002209687.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 50057 50398 . - . ID=gene-YPIP275_RS06475;Name=YPIP275_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06475;old_locus_tag=YPIP275_1888 NZ_AAOS02000006.1 Protein Homology CDS 50057 50398 . - 0 ID=cds-WP_002209688.1;Parent=gene-YPIP275_RS06475;Dbxref=GenBank:WP_002209688.1;Name=WP_002209688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209688.1;locus_tag=YPIP275_RS06475;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_002209688.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 50774 52813 . - . ID=gene-YPIP275_RS06480;Name=YPIP275_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06480;old_locus_tag=YPIP275_1890 NZ_AAOS02000006.1 Protein Homology CDS 50774 52813 . - 0 ID=cds-WP_002209690.1;Parent=gene-YPIP275_RS06480;Dbxref=GenBank:WP_002209690.1;Name=WP_002209690.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413816.1;locus_tag=YPIP275_RS06480;product=DUF2207 domain-containing protein;protein_id=WP_002209690.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 52818 53360 . - . ID=gene-YPIP275_RS06485;Name=YPIP275_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06485;old_locus_tag=YPIP275_1891 NZ_AAOS02000006.1 Protein Homology CDS 52818 53360 . - 0 ID=cds-WP_002209691.1;Parent=gene-YPIP275_RS06485;Dbxref=GenBank:WP_002209691.1;Name=WP_002209691.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104874.1;locus_tag=YPIP275_RS06485;product=LemA family protein;protein_id=WP_002209691.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 53647 53721 . + . ID=gene-YPIP275_RS06490;Name=YPIP275_RS06490;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS06490;old_locus_tag=YPIP275_1892 NZ_AAOS02000006.1 tRNAscan-SE tRNA 53647 53721 . + . ID=rna-YPIP275_RS06490;Parent=gene-YPIP275_RS06490;anticodon=(pos:53680..53682);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS06490;product=tRNA-Arg NZ_AAOS02000006.1 tRNAscan-SE exon 53647 53721 . + . ID=exon-YPIP275_RS06490-1;Parent=rna-YPIP275_RS06490;anticodon=(pos:53680..53682);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS06490;product=tRNA-Arg NZ_AAOS02000006.1 RefSeq gene 53976 54443 . + . ID=gene-YPIP275_RS06495;Name=YPIP275_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06495;old_locus_tag=YPIP275_1893 NZ_AAOS02000006.1 Protein Homology CDS 53976 54443 . + 0 ID=cds-WP_002209692.1;Parent=gene-YPIP275_RS06495;Dbxref=GenBank:WP_002209692.1;Name=WP_002209692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303913.1;locus_tag=YPIP275_RS06495;product=hypothetical protein;protein_id=WP_002209692.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 54888 55544 . + . ID=gene-YPIP275_RS06500;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06500;old_locus_tag=YPIP275_1894 NZ_AAOS02000006.1 Protein Homology CDS 54888 55544 . + 0 ID=cds-WP_002209693.1;Parent=gene-YPIP275_RS06500;Dbxref=GenBank:WP_002209693.1;Name=WP_002209693.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104878.1;locus_tag=YPIP275_RS06500;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_002209693.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 55514 56173 . + . ID=gene-YPIP275_RS06505;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=YPIP275_RS06505;old_locus_tag=YPIP275_1895 NZ_AAOS02000006.1 Protein Homology CDS 55514 56173 . + 0 ID=cds-WP_002209694.1;Parent=gene-YPIP275_RS06505;Dbxref=GenBank:WP_002209694.1;Name=WP_002209694.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209694.1;locus_tag=YPIP275_RS06505;product=heme exporter protein CcmB;protein_id=WP_002209694.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 56236 56973 . + . ID=gene-YPIP275_RS06510;Name=YPIP275_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06510;old_locus_tag=YPIP275_1896 NZ_AAOS02000006.1 Protein Homology CDS 56236 56973 . + 0 ID=cds-WP_002209695.1;Parent=gene-YPIP275_RS06510;Dbxref=GenBank:WP_002209695.1;Name=WP_002209695.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081955.1;locus_tag=YPIP275_RS06510;product=heme ABC transporter permease;protein_id=WP_002209695.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 56970 57272 . + . ID=gene-YPIP275_RS06515;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=YPIP275_RS06515;old_locus_tag=YPIP275_1897 NZ_AAOS02000006.1 Protein Homology CDS 56970 57272 . + 0 ID=cds-WP_002209696.1;Parent=gene-YPIP275_RS06515;Dbxref=GenBank:WP_002209696.1;Name=WP_002209696.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209696.1;locus_tag=YPIP275_RS06515;product=heme exporter protein CcmD;protein_id=WP_002209696.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 57269 57763 . + . ID=gene-YPIP275_RS06520;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=YPIP275_RS06520;old_locus_tag=YPIP275_1898 NZ_AAOS02000006.1 Protein Homology CDS 57269 57763 . + 0 ID=cds-WP_002209697.1;Parent=gene-YPIP275_RS06520;Dbxref=GenBank:WP_002209697.1;Name=WP_002209697.1;Ontology_term=GO:0017004,GO:0020037,GO:0005886;gbkey=CDS;gene=ccmE;go_component=plasma membrane|0005886||IEA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209697.1;locus_tag=YPIP275_RS06520;product=cytochrome c maturation protein CcmE;protein_id=WP_002209697.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 57760 59730 . + . ID=gene-YPIP275_RS06525;Name=YPIP275_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06525;old_locus_tag=YPIP275_1899 NZ_AAOS02000006.1 Protein Homology CDS 57760 59730 . + 0 ID=cds-WP_002209698.1;Parent=gene-YPIP275_RS06525;Dbxref=GenBank:WP_002209698.1;Name=WP_002209698.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192697.1;locus_tag=YPIP275_RS06525;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_002209698.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 59727 60293 . + . ID=gene-YPIP275_RS06530;Name=YPIP275_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06530;old_locus_tag=YPIP275_1900 NZ_AAOS02000006.1 Protein Homology CDS 59727 60293 . + 0 ID=cds-WP_002209699.1;Parent=gene-YPIP275_RS06530;Dbxref=GenBank:WP_002209699.1;Name=WP_002209699.1;Ontology_term=GO:0017004,GO:0015036,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222247.1;locus_tag=YPIP275_RS06530;product=DsbE family thiol:disulfide interchange protein;protein_id=WP_002209699.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 60290 60802 . + . ID=gene-YPIP275_RS06535;Name=YPIP275_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06535;old_locus_tag=YPIP275_1901 NZ_AAOS02000006.1 Protein Homology CDS 60290 60802 . + 0 ID=cds-WP_002214855.1;Parent=gene-YPIP275_RS06535;Dbxref=GenBank:WP_002214855.1;Name=WP_002214855.1;Ontology_term=GO:0017004,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214855.1;locus_tag=YPIP275_RS06535;product=cytochrome c-type biogenesis protein;protein_id=WP_002214855.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 60802 62028 . + . ID=gene-YPIP275_RS06540;Name=ccmI;gbkey=Gene;gene=ccmI;gene_biotype=protein_coding;locus_tag=YPIP275_RS06540;old_locus_tag=YPIP275_1902 NZ_AAOS02000006.1 Protein Homology CDS 60802 62028 . + 0 ID=cds-WP_002209700.1;Parent=gene-YPIP275_RS06540;Dbxref=GenBank:WP_002209700.1;Name=WP_002209700.1;Ontology_term=GO:0017004;gbkey=CDS;gene=ccmI;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104880.1;locus_tag=YPIP275_RS06540;product=c-type cytochrome biogenesis protein CcmI;protein_id=WP_002209700.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 62064 62828 . + . ID=gene-YPIP275_RS06545;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06545;old_locus_tag=YPIP275_1903 NZ_AAOS02000006.1 Protein Homology CDS 62064 62828 . + 0 ID=cds-WP_002209701.1;Parent=gene-YPIP275_RS06545;Dbxref=GenBank:WP_002209701.1;Name=WP_002209701.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209701.1;locus_tag=YPIP275_RS06545;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_002209701.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 62935 64200 . - . ID=gene-YPIP275_RS06550;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=YPIP275_RS06550;old_locus_tag=YPIP275_1904 NZ_AAOS02000006.1 Protein Homology CDS 62935 64200 . - 0 ID=cds-WP_002209702.1;Parent=gene-YPIP275_RS06550;Dbxref=GenBank:WP_002209702.1;Name=WP_002209702.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303917.1;locus_tag=YPIP275_RS06550;product=long-chain fatty acid transporter FadL;protein_id=WP_002209702.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 64614 64910 . + . ID=gene-YPIP275_RS06555;Name=YPIP275_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06555 NZ_AAOS02000006.1 Protein Homology CDS 64614 64910 . + 0 ID=cds-WP_002227845.1;Parent=gene-YPIP275_RS06555;Dbxref=GenBank:WP_002227845.1;Name=WP_002227845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015841013.1;locus_tag=YPIP275_RS06555;product=YfcZ/YiiS family protein;protein_id=WP_002227845.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 65197 66507 . + . ID=gene-YPIP275_RS06560;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=YPIP275_RS06560;old_locus_tag=YPIP275_1906 NZ_AAOS02000006.1 Protein Homology CDS 65197 66507 . + 0 ID=cds-WP_002209704.1;Parent=gene-YPIP275_RS06560;Dbxref=GenBank:WP_002209704.1;Name=WP_002209704.1;gbkey=CDS;gene=fadI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147408.1;locus_tag=YPIP275_RS06560;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_002209704.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 66507 68831 . + . ID=gene-YPIP275_RS06565;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS06565;old_locus_tag=YPIP275_1907 NZ_AAOS02000006.1 Protein Homology CDS 66507 68831 . + 0 ID=cds-WP_002209705.1;Parent=gene-YPIP275_RS06565;Dbxref=GenBank:WP_002209705.1;Name=WP_002209705.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209705.1;locus_tag=YPIP275_RS06565;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_002209705.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 69400 69891 . + . ID=gene-YPIP275_RS06570;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06570;old_locus_tag=YPIP275_1909 NZ_AAOS02000006.1 Protein Homology CDS 69400 69891 . + 0 ID=cds-WP_002209707.1;Parent=gene-YPIP275_RS06570;Dbxref=GenBank:WP_002209707.1;Name=WP_002209707.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104883.1;locus_tag=YPIP275_RS06570;product=phosphohistidine phosphatase SixA;protein_id=WP_002209707.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 70253 70783 . - . ID=gene-YPIP275_RS06575;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=YPIP275_RS06575;old_locus_tag=YPIP275_1911 NZ_AAOS02000006.1 Protein Homology CDS 70253 70783 . - 0 ID=cds-WP_002227846.1;Parent=gene-YPIP275_RS06575;Dbxref=GenBank:WP_002227846.1;Name=WP_002227846.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005171938.1;locus_tag=YPIP275_RS06575;product=endonuclease SmrB;protein_id=WP_002227846.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 71153 72085 . + . ID=gene-YPIP275_RS06580;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=YPIP275_RS06580;old_locus_tag=YPIP275_1912 NZ_AAOS02000006.1 Protein Homology CDS 71153 72085 . + 0 ID=cds-WP_002209710.1;Parent=gene-YPIP275_RS06580;Dbxref=GenBank:WP_002209710.1;Name=WP_002209710.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081969.1;locus_tag=YPIP275_RS06580;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_002209710.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 72162 73247 . + . ID=gene-YPIP275_RS06585;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=YPIP275_RS06585;old_locus_tag=YPIP275_1913 NZ_AAOS02000006.1 Protein Homology CDS 72162 73247 . + 0 ID=cds-WP_002209711.1;Parent=gene-YPIP275_RS06585;Dbxref=GenBank:WP_002209711.1;Name=WP_002209711.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209711.1;locus_tag=YPIP275_RS06585;product=chorismate synthase;protein_id=WP_002209711.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 73253 74080 . + . ID=gene-YPIP275_RS06590;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06590;old_locus_tag=YPIP275_1914 NZ_AAOS02000006.1 Protein Homology CDS 73253 74080 . + 0 ID=cds-WP_002209712.1;Parent=gene-YPIP275_RS06590;Dbxref=GenBank:WP_002209712.1;Name=WP_002209712.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674225.1;locus_tag=YPIP275_RS06590;product=penicillin-insensitive murein endopeptidase;protein_id=WP_002209712.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 74084 74890 . + . ID=gene-YPIP275_RS06595;Name=YPIP275_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06595;old_locus_tag=YPIP275_1915 NZ_AAOS02000006.1 Protein Homology CDS 74084 74890 . + 0 ID=cds-WP_002209713.1;Parent=gene-YPIP275_RS06595;Dbxref=GenBank:WP_002209713.1;Name=WP_002209713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702892.1;locus_tag=YPIP275_RS06595;product=sulfite exporter TauE/SafE family protein;protein_id=WP_002209713.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 74990 75532 . + . ID=gene-YPIP275_RS06600;Name=YPIP275_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06600;old_locus_tag=YPIP275_1916 NZ_AAOS02000006.1 Protein Homology CDS 74990 75532 . + 0 ID=cds-WP_002209714.1;Parent=gene-YPIP275_RS06600;Dbxref=GenBank:WP_002209714.1;Name=WP_002209714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209714.1;locus_tag=YPIP275_RS06600;product=elongation factor P hydroxylase;protein_id=WP_002209714.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 75590 75868 . + . ID=gene-YPIP275_RS06605;Name=YPIP275_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06605;old_locus_tag=YPIP275_1917 NZ_AAOS02000006.1 Protein Homology CDS 75590 75868 . + 0 ID=cds-WP_002209715.1;Parent=gene-YPIP275_RS06605;Dbxref=GenBank:WP_002209715.1;Name=WP_002209715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209715.1;locus_tag=YPIP275_RS06605;product=YfcL family protein;protein_id=WP_002209715.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 76046 78115 . - . ID=gene-YPIP275_RS06610;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=YPIP275_RS06610;old_locus_tag=YPIP275_1918 NZ_AAOS02000006.1 Protein Homology CDS 76046 78115 . - 0 ID=cds-WP_002209716.1;Parent=gene-YPIP275_RS06610;Dbxref=GenBank:WP_002209716.1;Name=WP_002209716.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209716.1;locus_tag=YPIP275_RS06610;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmC2/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC1;protein_id=WP_002209716.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 78287 79510 . + . ID=gene-YPIP275_RS06615;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=YPIP275_RS06615;old_locus_tag=YPIP275_1919 NZ_AAOS02000006.1 Protein Homology CDS 78287 79510 . + 0 ID=cds-WP_002209717.1;Parent=gene-YPIP275_RS06615;Dbxref=GenBank:WP_002209717.1;Name=WP_002209717.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192688.1;locus_tag=YPIP275_RS06615;product=beta-ketoacyl-ACP synthase I;protein_id=WP_002209717.1;transl_table=11 NZ_AAOS02000006.1 RefSeq pseudogene 79569 79646 . - . ID=gene-YPIP275_RS27020;Name=YPIP275_RS27020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS27020;partial=true;pseudo=true;start_range=.,79569 NZ_AAOS02000006.1 Protein Homology CDS 79569 79646 . - 0 ID=cds-YPIP275_RS27020;Parent=gene-YPIP275_RS27020;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=YPIP275_RS27020;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;start_range=.,79569;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 79918 80610 . - . ID=gene-YPIP275_RS06620;Name=YPIP275_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06620;old_locus_tag=YPIP275_1920 NZ_AAOS02000006.1 Protein Homology CDS 79918 80610 . - 0 ID=cds-WP_002209718.1;Parent=gene-YPIP275_RS06620;Dbxref=GenBank:WP_002209718.1;Name=WP_002209718.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209718.1;locus_tag=YPIP275_RS06620;product=aspartate/glutamate racemase family protein;protein_id=WP_002209718.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 81401 81931 . + . ID=gene-YPIP275_RS06625;Name=YPIP275_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06625;old_locus_tag=YPIP275_1922 NZ_AAOS02000006.1 Protein Homology CDS 81401 81931 . + 0 ID=cds-WP_002209720.1;Parent=gene-YPIP275_RS06625;Dbxref=GenBank:WP_002209720.1;Name=WP_002209720.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193076.1;locus_tag=YPIP275_RS06625;product=fimbrial protein;protein_id=WP_002209720.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 82273 83310 . - . ID=gene-YPIP275_RS06630;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=YPIP275_RS06630;old_locus_tag=YPIP275_1923 NZ_AAOS02000006.1 Protein Homology CDS 82273 83310 . - 0 ID=cds-WP_002209721.1;Parent=gene-YPIP275_RS06630;Dbxref=GenBank:WP_002209721.1;Name=WP_002209721.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005171873.1;locus_tag=YPIP275_RS06630;product=flagella biosynthesis regulator Flk;protein_id=WP_002209721.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 83595 84512 . - . ID=gene-YPIP275_RS06635;Name=YPIP275_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06635;old_locus_tag=YPIP275_1924 NZ_AAOS02000006.1 Protein Homology CDS 83595 84512 . - 0 ID=cds-WP_002209722.1;Parent=gene-YPIP275_RS06635;Dbxref=GenBank:WP_002209722.1;Name=WP_002209722.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303922.1;locus_tag=YPIP275_RS06635;product=DMT family transporter;protein_id=WP_002209722.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 84738 85523 . + . ID=gene-YPIP275_RS06645;Name=YPIP275_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06645;old_locus_tag=YPIP275_1926 NZ_AAOS02000006.1 Protein Homology CDS 84738 85523 . + 0 ID=cds-WP_002209724.1;Parent=gene-YPIP275_RS06645;Dbxref=GenBank:WP_002209724.1;Name=WP_002209724.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209724.1;locus_tag=YPIP275_RS06645;product=AraC family transcriptional regulator;protein_id=WP_002209724.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 85570 86697 . + . ID=gene-YPIP275_RS06650;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=YPIP275_RS06650;old_locus_tag=YPIP275_1927 NZ_AAOS02000006.1 Protein Homology CDS 85570 86697 . + 0 ID=cds-WP_002209725.1;Parent=gene-YPIP275_RS06650;Dbxref=GenBank:WP_002209725.1;Name=WP_002209725.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276711.1;locus_tag=YPIP275_RS06650;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_002209725.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 86841 87299 . - . ID=gene-YPIP275_RS06655;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06655;old_locus_tag=YPIP275_1928 NZ_AAOS02000006.1 Protein Homology CDS 86841 87299 . - 0 ID=cds-WP_002213775.1-29;Parent=gene-YPIP275_RS06655;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS06655;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 87578 88588 . + . ID=gene-YPIP275_RS06660;Name=YPIP275_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06660;old_locus_tag=YPIP275_1929 NZ_AAOS02000006.1 Protein Homology CDS 87578 88588 . + 0 ID=cds-WP_002209726.1;Parent=gene-YPIP275_RS06660;Dbxref=GenBank:WP_002209726.1;Name=WP_002209726.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209726.1;locus_tag=YPIP275_RS06660;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_002209726.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 88588 89469 . + . ID=gene-YPIP275_RS06665;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06665;old_locus_tag=YPIP275_1930 NZ_AAOS02000006.1 Protein Homology CDS 88588 89469 . + 0 ID=cds-WP_002209727.1;Parent=gene-YPIP275_RS06665;Dbxref=GenBank:WP_002209727.1;Name=WP_002209727.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209727.1;locus_tag=YPIP275_RS06665;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_002209727.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 89626 90288 . + . ID=gene-YPIP275_RS06670;Name=YPIP275_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06670;old_locus_tag=YPIP275_1931 NZ_AAOS02000006.1 Protein Homology CDS 89626 90288 . + 0 ID=cds-WP_002209728.1;Parent=gene-YPIP275_RS06670;Dbxref=GenBank:WP_002209728.1;Name=WP_002209728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276713.1;locus_tag=YPIP275_RS06670;product=DedA family protein;protein_id=WP_002209728.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 90519 91433 . + . ID=gene-YPIP275_RS06675;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=YPIP275_RS06675;old_locus_tag=YPIP275_1932 NZ_AAOS02000006.1 Protein Homology CDS 90519 91433 . + 0 ID=cds-WP_002209729.1;Parent=gene-YPIP275_RS06675;Dbxref=GenBank:WP_002209729.1;Name=WP_002209729.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906305.1;locus_tag=YPIP275_RS06675;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_002209729.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 91682 92986 . + . ID=gene-YPIP275_RS06680;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=YPIP275_RS06680;old_locus_tag=YPIP275_1933 NZ_AAOS02000006.1 Protein Homology CDS 91682 92986 . + 0 ID=cds-WP_002209730.1;Parent=gene-YPIP275_RS06680;Dbxref=GenBank:WP_002209730.1;Name=WP_002209730.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303924.1;locus_tag=YPIP275_RS06680;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_002209730.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 93106 93828 . + . ID=gene-YPIP275_RS06685;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=YPIP275_RS06685;old_locus_tag=YPIP275_1934 NZ_AAOS02000006.1 Protein Homology CDS 93106 93828 . + 0 ID=cds-WP_002209731.1;Parent=gene-YPIP275_RS06685;Dbxref=GenBank:WP_002209731.1;Name=WP_002209731.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209731.1;locus_tag=YPIP275_RS06685;product=cell division protein DedD;protein_id=WP_002209731.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 94140 94649 . + . ID=gene-YPIP275_RS06690;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06690;old_locus_tag=YPIP275_1935 NZ_AAOS02000006.1 Protein Homology CDS 94140 94649 . + 0 ID=cds-WP_002209732.1;Parent=gene-YPIP275_RS06690;Dbxref=GenBank:WP_002209732.1;Name=WP_002209732.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004708846.1;locus_tag=YPIP275_RS06690;product=colicin V production protein;protein_id=WP_002209732.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 94662 96179 . + . ID=gene-YPIP275_RS06695;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=YPIP275_RS06695;old_locus_tag=YPIP275_1936 NZ_AAOS02000006.1 Protein Homology CDS 94662 96179 . + 0 ID=cds-WP_002209733.1;Parent=gene-YPIP275_RS06695;Dbxref=GenBank:WP_002209733.1;Name=WP_002209733.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=YPIP275_RS06695;product=amidophosphoribosyltransferase;protein_id=WP_002209733.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 96426 96998 . + . ID=gene-YPIP275_RS06700;Name=YPIP275_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06700;old_locus_tag=YPIP275_1937 NZ_AAOS02000006.1 Protein Homology CDS 96426 96998 . + 0 ID=cds-WP_002209734.1;Parent=gene-YPIP275_RS06700;Dbxref=GenBank:WP_002209734.1;Name=WP_002209734.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209734.1;locus_tag=YPIP275_RS06700;product=UbiX family flavin prenyltransferase;protein_id=WP_002209734.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 97523 98305 . + . ID=gene-YPIP275_RS06705;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS06705;old_locus_tag=YPIP275_1938 NZ_AAOS02000006.1 Protein Homology CDS 97523 98305 . + 0 ID=cds-WP_002216029.1;Parent=gene-YPIP275_RS06705;Dbxref=GenBank:WP_002216029.1;Name=WP_002216029.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216029.1;locus_tag=YPIP275_RS06705;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_002216029.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 98408 99094 . + . ID=gene-YPIP275_RS06710;Name=YPIP275_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06710;old_locus_tag=YPIP275_1939 NZ_AAOS02000006.1 Protein Homology CDS 98408 99094 . + 0 ID=cds-WP_002209736.1;Parent=gene-YPIP275_RS06710;Dbxref=GenBank:WP_002209736.1;Name=WP_002209736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815927.1;locus_tag=YPIP275_RS06710;product=histidine ABC transporter permease HisQ;protein_id=WP_002209736.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 99091 99807 . + . ID=gene-YPIP275_RS06715;Name=YPIP275_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06715;old_locus_tag=YPIP275_1940 NZ_AAOS02000006.1 Protein Homology CDS 99091 99807 . + 0 ID=cds-WP_002209737.1;Parent=gene-YPIP275_RS06715;Dbxref=GenBank:WP_002209737.1;Name=WP_002209737.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131463.1;locus_tag=YPIP275_RS06715;product=ABC transporter permease;protein_id=WP_002209737.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 99821 100618 . + . ID=gene-YPIP275_RS06720;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=YPIP275_RS06720;old_locus_tag=YPIP275_1941 NZ_AAOS02000006.1 Protein Homology CDS 99821 100618 . + 0 ID=cds-WP_002209738.1;Parent=gene-YPIP275_RS06720;Dbxref=GenBank:WP_002209738.1;Name=WP_002209738.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209738.1;locus_tag=YPIP275_RS06720;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_002209738.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 100742 101650 . - . ID=gene-YPIP275_RS06725;Name=YPIP275_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06725;old_locus_tag=YPIP275_1942 NZ_AAOS02000006.1 Protein Homology CDS 100742 101650 . - 0 ID=cds-WP_002209739.1;Parent=gene-YPIP275_RS06725;Dbxref=GenBank:WP_002209739.1;Name=WP_002209739.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209739.1;locus_tag=YPIP275_RS06725;product=TIGR01777 family oxidoreductase;protein_id=WP_002209739.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 102004 102696 . + . ID=gene-YPIP275_RS06730;Name=YPIP275_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06730;old_locus_tag=YPIP275_1943 NZ_AAOS02000006.1 Protein Homology CDS 102004 102696 . + 0 ID=cds-WP_002209740.1;Parent=gene-YPIP275_RS06730;Dbxref=GenBank:WP_002209740.1;Name=WP_002209740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303928.1;locus_tag=YPIP275_RS06730;product=EAL domain-containing protein;protein_id=WP_002209740.1;transl_table=11 NZ_AAOS02000006.1 RefSeq pseudogene 102884 103472 . + . ID=gene-YPIP275_RS06735;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=pseudogene;locus_tag=YPIP275_RS06735;old_locus_tag=YPIP275_1944;pseudo=true NZ_AAOS02000006.1 Protein Homology CDS 102884 103472 . + 0 ID=cds-YPIP275_RS06735;Parent=gene-YPIP275_RS06735;Note=frameshifted;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004714843.1;locus_tag=YPIP275_RS06735;product=phosphodiesterase;pseudo=true;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 103694 104242 . + . ID=gene-YPIP275_RS06740;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=YPIP275_RS06740;old_locus_tag=YPIP275_1946 NZ_AAOS02000006.1 Protein Homology CDS 103694 104242 . + 0 ID=cds-WP_002209742.1;Parent=gene-YPIP275_RS06740;Dbxref=GenBank:WP_002209742.1;Name=WP_002209742.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209742.1;locus_tag=YPIP275_RS06740;product=NUDIX hydrolase YfcD;protein_id=WP_002209742.1;transl_table=11 NZ_AAOS02000006.1 RefSeq pseudogene 104359 105614 . - . ID=gene-YPIP275_RS06745;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=pseudogene;gene_synonym=sgaT;locus_tag=YPIP275_RS06745;old_locus_tag=YPIP275_1947;pseudo=true NZ_AAOS02000006.1 Protein Homology CDS 104359 105614 . - 0 ID=cds-YPIP275_RS06745;Parent=gene-YPIP275_RS06745;Note=frameshifted;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815933.1;locus_tag=YPIP275_RS06745;product=PTS ascorbate transporter subunit IIC;pseudo=true;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 105754 106962 . + . ID=gene-YPIP275_RS06750;Name=YPIP275_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06750;old_locus_tag=YPIP275_1948 NZ_AAOS02000006.1 Protein Homology CDS 105754 106962 . + 0 ID=cds-WP_002209743.1-20;Parent=gene-YPIP275_RS06750;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS06750;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000006.1 RefSeq pseudogene 106996 108528 . + . ID=gene-YPIP275_RS06755;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=pseudogene;locus_tag=YPIP275_RS06755;old_locus_tag=YPIP275_1949;partial=true;pseudo=true;start_range=.,106996 NZ_AAOS02000006.1 Protein Homology CDS 106996 108528 . + 0 ID=cds-YPIP275_RS06755;Parent=gene-YPIP275_RS06755;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009252,GO:0003824,GO:0009274;gbkey=CDS;gene=pbpC;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413535.1;locus_tag=YPIP275_RS06755;partial=true;product=penicillin-binding protein 1C;pseudo=true;start_range=.,106996;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 108741 108986 . - . ID=gene-YPIP275_RS06760;Name=YPIP275_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06760;old_locus_tag=YPIP275_1950 NZ_AAOS02000006.1 Protein Homology CDS 108741 108986 . - 0 ID=cds-WP_002209745.1;Parent=gene-YPIP275_RS06760;Dbxref=GenBank:WP_002209745.1;Name=WP_002209745.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209745.1;locus_tag=YPIP275_RS06760;product=helix-turn-helix domain-containing protein;protein_id=WP_002209745.1;transl_table=11 NZ_AAOS02000006.1 RefSeq pseudogene 109659 110515 . + . ID=gene-YPIP275_RS06765;Name=YPIP275_RS06765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS06765;old_locus_tag=YPIP275_1951;pseudo=true NZ_AAOS02000006.1 Protein Homology CDS 109659 110515 . + 0 ID=cds-YPIP275_RS06765;Parent=gene-YPIP275_RS06765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015841646.1;locus_tag=YPIP275_RS06765;product=hypothetical protein;pseudo=true;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 110508 110909 . + . ID=gene-YPIP275_RS06770;Name=YPIP275_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06770;old_locus_tag=YPIP275_1952 NZ_AAOS02000006.1 Protein Homology CDS 110508 110909 . + 0 ID=cds-WP_002209746.1;Parent=gene-YPIP275_RS06770;Dbxref=GenBank:WP_002209746.1;Name=WP_002209746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209746.1;locus_tag=YPIP275_RS06770;product=DUF1240 domain-containing protein;protein_id=WP_002209746.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 111142 111543 . + . ID=gene-YPIP275_RS06775;Name=YPIP275_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06775;old_locus_tag=YPIP275_1954 NZ_AAOS02000006.1 Protein Homology CDS 111142 111543 . + 0 ID=cds-WP_002209748.1;Parent=gene-YPIP275_RS06775;Dbxref=GenBank:WP_002209748.1;Name=WP_002209748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209748.1;locus_tag=YPIP275_RS06775;product=DUF1240 domain-containing protein;protein_id=WP_002209748.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 111555 112127 . - . ID=gene-YPIP275_RS06780;Name=YPIP275_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06780;old_locus_tag=YPIP275_1955 NZ_AAOS02000006.1 Protein Homology CDS 111555 112127 . - 0 ID=cds-WP_002209749.1;Parent=gene-YPIP275_RS06780;Dbxref=GenBank:WP_002209749.1;Name=WP_002209749.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209749.1;locus_tag=YPIP275_RS06780;product=Hcp family type VI secretion system effector;protein_id=WP_002209749.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 112151 112402 . - . ID=gene-YPIP275_RS06785;Name=YPIP275_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06785;old_locus_tag=YPIP275_1956 NZ_AAOS02000006.1 Protein Homology CDS 112151 112402 . - 0 ID=cds-WP_002227852.1;Parent=gene-YPIP275_RS06785;Dbxref=GenBank:WP_002227852.1;Name=WP_002227852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191914.1;locus_tag=YPIP275_RS06785;product=hypothetical protein;protein_id=WP_002227852.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 112441 112680 . - . ID=gene-YPIP275_RS06790;Name=YPIP275_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06790;old_locus_tag=YPIP275_1957 NZ_AAOS02000006.1 Protein Homology CDS 112441 112680 . - 0 ID=cds-WP_002209751.1;Parent=gene-YPIP275_RS06790;Dbxref=GenBank:WP_002209751.1;Name=WP_002209751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209751.1;locus_tag=YPIP275_RS06790;product=hypothetical protein;protein_id=WP_002209751.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 113489 115405 . + . ID=gene-YPIP275_RS06795;Name=yapC;gbkey=Gene;gene=yapC;gene_biotype=protein_coding;locus_tag=YPIP275_RS06795;old_locus_tag=YPIP275_1958 NZ_AAOS02000006.1 Protein Homology CDS 113489 115405 . + 0 ID=cds-WP_002209752.1;Parent=gene-YPIP275_RS06795;Dbxref=GenBank:WP_002209752.1;Name=WP_002209752.1;gbkey=CDS;gene=yapC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209752.1;locus_tag=YPIP275_RS06795;product=autotransporter adhesin YapC;protein_id=WP_002209752.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 115529 115651 . + . ID=gene-YPIP275_RS27035;Name=YPIP275_RS27035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27035 NZ_AAOS02000006.1 Protein Homology CDS 115529 115651 . + 0 ID=cds-WP_002224869.1;Parent=gene-YPIP275_RS27035;Dbxref=GenBank:WP_002224869.1;Name=WP_002224869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=YPIP275_RS27035;product=hypothetical protein;protein_id=WP_002224869.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 115940 116521 . + . ID=gene-YPIP275_RS06800;Name=YPIP275_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06800;old_locus_tag=YPIP275_1959 NZ_AAOS02000006.1 Protein Homology CDS 115940 116521 . + 0 ID=cds-WP_002209753.1;Parent=gene-YPIP275_RS06800;Dbxref=GenBank:WP_002209753.1;Name=WP_002209753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209753.1;locus_tag=YPIP275_RS06800;product=AbiEi antitoxin N-terminal domain-containing protein;protein_id=WP_002209753.1;transl_table=11 NZ_AAOS02000006.1 RefSeq pseudogene 116536 116886 . - . ID=gene-YPIP275_RS06805;Name=YPIP275_RS06805;end_range=116886,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS06805;old_locus_tag=YPIP275_1960;partial=true;pseudo=true NZ_AAOS02000006.1 Protein Homology CDS 116536 116886 . - 0 ID=cds-YPIP275_RS06805;Parent=gene-YPIP275_RS06805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=116886,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011092042.1;locus_tag=YPIP275_RS06805;partial=true;product=winged helix domain-containing protein;pseudo=true;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 116923 118131 . - . ID=gene-YPIP275_RS06810;Name=YPIP275_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06810;old_locus_tag=YPIP275_1961 NZ_AAOS02000006.1 Protein Homology CDS 116923 118131 . - 0 ID=cds-WP_002209743.1-21;Parent=gene-YPIP275_RS06810;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS06810;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 118583 120790 . + . ID=gene-YPIP275_RS06815;Name=YPIP275_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06815;old_locus_tag=YPIP275_1963 NZ_AAOS02000006.1 Protein Homology CDS 118583 120790 . + 0 ID=cds-WP_002209756.1;Parent=gene-YPIP275_RS06815;Dbxref=GenBank:WP_002209756.1;Name=WP_002209756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016603439.1;locus_tag=YPIP275_RS06815;product=DUF4401 domain-containing protein;protein_id=WP_002209756.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 120783 121313 . + . ID=gene-YPIP275_RS06820;Name=YPIP275_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06820;old_locus_tag=YPIP275_1964 NZ_AAOS02000006.1 Protein Homology CDS 120783 121313 . + 0 ID=cds-WP_002209757.1;Parent=gene-YPIP275_RS06820;Dbxref=GenBank:WP_002209757.1;Name=WP_002209757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002359855.1;locus_tag=YPIP275_RS06820;product=GDYXXLXY domain-containing protein;protein_id=WP_002209757.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 121472 123853 . + . ID=gene-YPIP275_RS06825;Name=YPIP275_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06825;old_locus_tag=YPIP275_1965 NZ_AAOS02000006.1 Protein Homology CDS 121472 123853 . + 0 ID=cds-WP_002209758.1;Parent=gene-YPIP275_RS06825;Dbxref=GenBank:WP_002209758.1;Name=WP_002209758.1;Ontology_term=GO:0015926;gbkey=CDS;go_function=glucosidase activity|0015926||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228358.1;locus_tag=YPIP275_RS06825;product=beta-glucosidase family protein;protein_id=WP_002209758.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 123932 125560 . - . ID=gene-YPIP275_RS06830;Name=YPIP275_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06830;old_locus_tag=YPIP275_1966 NZ_AAOS02000006.1 Protein Homology CDS 123932 125560 . - 0 ID=cds-WP_002209759.1;Parent=gene-YPIP275_RS06830;Dbxref=GenBank:WP_002209759.1;Name=WP_002209759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191907.1;locus_tag=YPIP275_RS06830;product=hypothetical protein;protein_id=WP_002209759.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 125577 125720 . - . ID=gene-YPIP275_RS06835;Name=YPIP275_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06835;old_locus_tag=YPIP275_1967 NZ_AAOS02000006.1 Protein Homology CDS 125577 125720 . - 0 ID=cds-WP_002215244.1;Parent=gene-YPIP275_RS06835;Dbxref=GenBank:WP_002215244.1;Name=WP_002215244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215244.1;locus_tag=YPIP275_RS06835;product=hypothetical protein;protein_id=WP_002215244.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 125717 125842 . - . ID=gene-YPIP275_RS06840;Name=YPIP275_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06840;old_locus_tag=YPIP275_1968 NZ_AAOS02000006.1 Protein Homology CDS 125717 125842 . - 0 ID=cds-WP_002215246.1;Parent=gene-YPIP275_RS06840;Dbxref=GenBank:WP_002215246.1;Name=WP_002215246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215246.1;locus_tag=YPIP275_RS06840;product=hypothetical protein;protein_id=WP_002215246.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 126033 126884 . + . ID=gene-YPIP275_RS06845;Name=YPIP275_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06845;old_locus_tag=YPIP275_1969 NZ_AAOS02000006.1 Protein Homology CDS 126033 126884 . + 0 ID=cds-WP_002209762.1;Parent=gene-YPIP275_RS06845;Dbxref=GenBank:WP_002209762.1;Name=WP_002209762.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195265.1;locus_tag=YPIP275_RS06845;product=aldo/keto reductase;protein_id=WP_002209762.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 126910 127899 . + . ID=gene-YPIP275_RS06850;Name=YPIP275_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06850;old_locus_tag=YPIP275_1970 NZ_AAOS02000006.1 Protein Homology CDS 126910 127899 . + 0 ID=cds-WP_002209763.1;Parent=gene-YPIP275_RS06850;Dbxref=GenBank:WP_002209763.1;Name=WP_002209763.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001172283.1;locus_tag=YPIP275_RS06850;product=aldo/keto reductase;protein_id=WP_002209763.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 127954 128847 . - . ID=gene-YPIP275_RS06855;Name=YPIP275_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06855;old_locus_tag=YPIP275_1971 NZ_AAOS02000006.1 Protein Homology CDS 127954 128847 . - 0 ID=cds-WP_002209764.1;Parent=gene-YPIP275_RS06855;Dbxref=GenBank:WP_002209764.1;Name=WP_002209764.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209764.1;locus_tag=YPIP275_RS06855;product=LysR family transcriptional regulator;protein_id=WP_002209764.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 128941 129963 . + . ID=gene-YPIP275_RS06860;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06860;old_locus_tag=YPIP275_1972 NZ_AAOS02000006.1 Protein Homology CDS 128941 129963 . + 0 ID=cds-WP_000255944.1-33;Parent=gene-YPIP275_RS06860;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS06860;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 129960 130742 . + . ID=gene-YPIP275_RS06865;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS06865;old_locus_tag=YPIP275_1973 NZ_AAOS02000006.1 Protein Homology CDS 129960 130742 . + 0 ID=cds-WP_001317493.1-39;Parent=gene-YPIP275_RS06865;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS06865;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 131109 131414 . - . ID=gene-YPIP275_RS06870;Name=YPIP275_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06870 NZ_AAOS02000006.1 Protein Homology CDS 131109 131414 . - 0 ID=cds-WP_002215253.1;Parent=gene-YPIP275_RS06870;Dbxref=GenBank:WP_002215253.1;Name=WP_002215253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215253.1;locus_tag=YPIP275_RS06870;product=hypothetical protein;protein_id=WP_002215253.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 131511 131912 . - . ID=gene-YPIP275_RS06875;Name=YPIP275_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06875;old_locus_tag=YPIP275_1974 NZ_AAOS02000006.1 Protein Homology CDS 131511 131912 . - 0 ID=cds-WP_002209765.1;Parent=gene-YPIP275_RS06875;Dbxref=GenBank:WP_002209765.1;Name=WP_002209765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413532.1;locus_tag=YPIP275_RS06875;product=hypothetical protein;protein_id=WP_002209765.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 131894 133213 . - . ID=gene-YPIP275_RS06880;Name=YPIP275_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06880;old_locus_tag=YPIP275_1975 NZ_AAOS02000006.1 Protein Homology CDS 131894 133213 . - 0 ID=cds-WP_002209766.1;Parent=gene-YPIP275_RS06880;Dbxref=GenBank:WP_002209766.1;Name=WP_002209766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209766.1;locus_tag=YPIP275_RS06880;product=phosphatase PAP2/dual specificity phosphatase family protein;protein_id=WP_002209766.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 133206 134969 . - . ID=gene-YPIP275_RS06885;Name=YPIP275_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06885;old_locus_tag=YPIP275_1976 NZ_AAOS02000006.1 Protein Homology CDS 133206 134969 . - 0 ID=cds-WP_002209767.1;Parent=gene-YPIP275_RS06885;Dbxref=GenBank:WP_002209767.1;Name=WP_002209767.1;Ontology_term=GO:0008168,GO:0016787,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,hydrolase activity|0016787||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304419.1;locus_tag=YPIP275_RS06885;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_002209767.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 134966 135598 . - . ID=gene-YPIP275_RS06890;Name=YPIP275_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06890;old_locus_tag=YPIP275_1977 NZ_AAOS02000006.1 Protein Homology CDS 134966 135598 . - 0 ID=cds-WP_002209768.1;Parent=gene-YPIP275_RS06890;Dbxref=GenBank:WP_002209768.1;Name=WP_002209768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209768.1;locus_tag=YPIP275_RS06890;product=lysophospholipid acyltransferase family protein;protein_id=WP_002209768.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 135608 136537 . - . ID=gene-YPIP275_RS06895;Name=YPIP275_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06895;old_locus_tag=YPIP275_1978 NZ_AAOS02000006.1 Protein Homology CDS 135608 136537 . - 0 ID=cds-WP_002209769.1;Parent=gene-YPIP275_RS06895;Dbxref=GenBank:WP_002209769.1;Name=WP_002209769.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209769.1;locus_tag=YPIP275_RS06895;product=phosphatidate cytidylyltransferase;protein_id=WP_002209769.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 136530 137132 . - . ID=gene-YPIP275_RS06900;Name=YPIP275_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06900;old_locus_tag=YPIP275_1979 NZ_AAOS02000006.1 Protein Homology CDS 136530 137132 . - 0 ID=cds-WP_002209770.1;Parent=gene-YPIP275_RS06900;Dbxref=GenBank:WP_002209770.1;Name=WP_002209770.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209770.1;locus_tag=YPIP275_RS06900;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_002209770.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 137532 137738 . - . ID=gene-YPIP275_RS06910;Name=YPIP275_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06910 NZ_AAOS02000006.1 Protein Homology CDS 137532 137738 . - 0 ID=cds-WP_002354559.1;Parent=gene-YPIP275_RS06910;Dbxref=GenBank:WP_002354559.1;Name=WP_002354559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354559.1;locus_tag=YPIP275_RS06910;product=hypothetical protein;protein_id=WP_002354559.1;transl_table=11 NZ_AAOS02000006.1 RefSeq pseudogene 137929 138198 . + . ID=gene-YPIP275_RS27045;Name=YPIP275_RS27045;end_range=138198,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS27045;partial=true;pseudo=true;start_range=.,137929 NZ_AAOS02000006.1 Protein Homology CDS 137929 138198 . + 0 ID=cds-YPIP275_RS27045;Parent=gene-YPIP275_RS27045;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=138198,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051879.1;locus_tag=YPIP275_RS27045;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,137929;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 138311 138649 . + . ID=gene-YPIP275_RS06915;Name=YPIP275_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06915 NZ_AAOS02000006.1 Protein Homology CDS 138311 138649 . + 0 ID=cds-WP_002215266.1;Parent=gene-YPIP275_RS06915;Dbxref=GenBank:WP_002215266.1;Name=WP_002215266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158316.1;locus_tag=YPIP275_RS06915;product=hypothetical protein;protein_id=WP_002215266.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 138785 139282 . + . ID=gene-YPIP275_RS06925;Name=YPIP275_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06925;old_locus_tag=YPIP275_1982 NZ_AAOS02000006.1 Protein Homology CDS 138785 139282 . + 0 ID=cds-WP_002228356.1;Parent=gene-YPIP275_RS06925;Dbxref=GenBank:WP_002228356.1;Name=WP_002228356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228356.1;locus_tag=YPIP275_RS06925;product=hypothetical protein;protein_id=WP_002228356.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 139396 139596 . + . ID=gene-YPIP275_RS06930;Name=YPIP275_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06930 NZ_AAOS02000006.1 Protein Homology CDS 139396 139596 . + 0 ID=cds-WP_002215268.1;Parent=gene-YPIP275_RS06930;Dbxref=GenBank:WP_002215268.1;Name=WP_002215268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191898.1;locus_tag=YPIP275_RS06930;product=hypothetical protein;protein_id=WP_002215268.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 139855 140037 . + . ID=gene-YPIP275_RS06935;Name=YPIP275_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06935 NZ_AAOS02000006.1 Protein Homology CDS 139855 140037 . + 0 ID=cds-WP_002215270.1;Parent=gene-YPIP275_RS06935;Dbxref=GenBank:WP_002215270.1;Name=WP_002215270.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215270.1;locus_tag=YPIP275_RS06935;product=helix-turn-helix transcriptional regulator;protein_id=WP_002215270.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 140101 140177 . - . ID=gene-YPIP275_RS06940;Name=YPIP275_RS06940;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS06940;old_locus_tag=YPIP275_1983 NZ_AAOS02000006.1 tRNAscan-SE tRNA 140101 140177 . - . ID=rna-YPIP275_RS06940;Parent=gene-YPIP275_RS06940;anticodon=(pos:complement(140141..140143));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS06940;product=tRNA-Arg NZ_AAOS02000006.1 tRNAscan-SE exon 140101 140177 . - . ID=exon-YPIP275_RS06940-1;Parent=rna-YPIP275_RS06940;anticodon=(pos:complement(140141..140143));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS06940;product=tRNA-Arg NZ_AAOS02000006.1 RefSeq gene 140392 141258 . + . ID=gene-YPIP275_RS06945;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=YPIP275_RS06945;old_locus_tag=YPIP275_1985 NZ_AAOS02000006.1 Protein Homology CDS 140392 141258 . + 0 ID=cds-WP_002209774.1;Parent=gene-YPIP275_RS06945;Dbxref=GenBank:WP_002209774.1;Name=WP_002209774.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209774.1;locus_tag=YPIP275_RS06945;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_002209774.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 141273 141485 . + . ID=gene-YPIP275_RS06950;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS06950;old_locus_tag=YPIP275_1986 NZ_AAOS02000006.1 Protein Homology CDS 141273 141485 . + 0 ID=cds-WP_002209775.1;Parent=gene-YPIP275_RS06950;Dbxref=GenBank:WP_002209775.1;Name=WP_002209775.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209775.1;locus_tag=YPIP275_RS06950;product=ribosome-associated protein YbcJ;protein_id=WP_002209775.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 141632 142090 . - . ID=gene-YPIP275_RS06955;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06955;old_locus_tag=YPIP275_1987 NZ_AAOS02000006.1 Protein Homology CDS 141632 142090 . - 0 ID=cds-WP_002213775.1-30;Parent=gene-YPIP275_RS06955;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS06955;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 142266 142892 . - . ID=gene-YPIP275_RS06960;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=YPIP275_RS06960;old_locus_tag=YPIP275_1988 NZ_AAOS02000006.1 Protein Homology CDS 142266 142892 . - 0 ID=cds-WP_002209776.1;Parent=gene-YPIP275_RS06960;Dbxref=GenBank:WP_002209776.1;Name=WP_002209776.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=YPIP275_RS06960;product=uracil phosphoribosyltransferase;protein_id=WP_002209776.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 143289 144332 . + . ID=gene-YPIP275_RS06965;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=YPIP275_RS06965;old_locus_tag=YPIP275_1989 NZ_AAOS02000006.1 Protein Homology CDS 143289 144332 . + 0 ID=cds-WP_002209777.1;Parent=gene-YPIP275_RS06965;Dbxref=GenBank:WP_002209777.1;Name=WP_002209777.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004876822.1;locus_tag=YPIP275_RS06965;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_002209777.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 144447 145085 . + . ID=gene-YPIP275_RS06970;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=YPIP275_RS06970;old_locus_tag=YPIP275_1990 NZ_AAOS02000006.1 Protein Homology CDS 144447 145085 . + 0 ID=cds-WP_002209778.1;Parent=gene-YPIP275_RS06970;Dbxref=GenBank:WP_002209778.1;Name=WP_002209778.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391279.1;locus_tag=YPIP275_RS06970;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_002209778.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 145314 145859 . + . ID=gene-YPIP275_RS06975;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=YPIP275_RS06975;old_locus_tag=YPIP275_1991 NZ_AAOS02000006.1 Protein Homology CDS 145314 145859 . + 0 ID=cds-WP_002209779.1;Parent=gene-YPIP275_RS06975;Dbxref=GenBank:WP_002209779.1;Name=WP_002209779.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209779.1;locus_tag=YPIP275_RS06975;product=spermidine N1-acetyltransferase;protein_id=WP_002209779.1;transl_table=11 NZ_AAOS02000006.1 RefSeq pseudogene 145953 147142 . - . ID=gene-YPIP275_RS27050;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=pseudogene;locus_tag=YPIP275_RS27050;old_locus_tag=YPIP275_1992;pseudo=true NZ_AAOS02000006.1 Protein Homology CDS 145953 147142 . - 0 ID=cds-YPIP275_RS27050;Parent=gene-YPIP275_RS27050;Note=frameshifted;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303870.1;locus_tag=YPIP275_RS27050;product=flagellin lysine-N-methylase;pseudo=true;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 147370 148182 . - . ID=gene-YPIP275_RS06990;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=YPIP275_RS06990;old_locus_tag=YPIP275_1993 NZ_AAOS02000006.1 Protein Homology CDS 147370 148182 . - 0 ID=cds-WP_002209780.1;Parent=gene-YPIP275_RS06990;Dbxref=GenBank:WP_002209780.1;Name=WP_002209780.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016585461.1;locus_tag=YPIP275_RS06990;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_002209780.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 148210 149922 . - . ID=gene-YPIP275_RS06995;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06995;old_locus_tag=YPIP275_1994 NZ_AAOS02000006.1 Protein Homology CDS 148210 149922 . - 0 ID=cds-WP_002214668.1;Parent=gene-YPIP275_RS06995;Dbxref=GenBank:WP_002214668.1;Name=WP_002214668.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192773.1;locus_tag=YPIP275_RS06995;product=phosphate ABC transporter permease PstA;protein_id=WP_002214668.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 149922 152153 . - . ID=gene-YPIP275_RS07000;Name=YPIP275_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07000;old_locus_tag=YPIP275_1995 NZ_AAOS02000006.1 Protein Homology CDS 149922 152153 . - 0 ID=cds-WP_002214670.1;Parent=gene-YPIP275_RS07000;Dbxref=GenBank:WP_002214670.1;Name=WP_002214670.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413846.1;locus_tag=YPIP275_RS07000;product=ABC transporter permease subunit;protein_id=WP_002214670.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 152424 154487 . + . ID=gene-YPIP275_RS07005;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=YPIP275_RS07005;old_locus_tag=YPIP275_1996 NZ_AAOS02000006.1 Protein Homology CDS 152424 154487 . + 0 ID=cds-WP_002209782.1;Parent=gene-YPIP275_RS07005;Dbxref=GenBank:WP_002209782.1;Name=WP_002209782.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707808.1;locus_tag=YPIP275_RS07005;product=polyphosphate kinase 1;protein_id=WP_002209782.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 154498 156057 . + . ID=gene-YPIP275_RS07010;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=YPIP275_RS07010;old_locus_tag=YPIP275_1997 NZ_AAOS02000006.1 Protein Homology CDS 154498 156057 . + 0 ID=cds-WP_002209783.1;Parent=gene-YPIP275_RS07010;Dbxref=GenBank:WP_002209783.1;Name=WP_002209783.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209783.1;locus_tag=YPIP275_RS07010;product=exopolyphosphatase;protein_id=WP_002209783.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 156193 156381 . + . ID=gene-YPIP275_RS07015;Name=YPIP275_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07015 NZ_AAOS02000006.1 Protein Homology CDS 156193 156381 . + 0 ID=cds-WP_012303868.1;Parent=gene-YPIP275_RS07015;Dbxref=GenBank:WP_012303868.1;Name=WP_012303868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005162154.1;locus_tag=YPIP275_RS07015;product=YfgG family protein;protein_id=WP_012303868.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 156433 157908 . + . ID=gene-YPIP275_RS07020;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=YPIP275_RS07020;old_locus_tag=YPIP275_1998 NZ_AAOS02000006.1 Protein Homology CDS 156433 157908 . + 0 ID=cds-WP_002209784.1;Parent=gene-YPIP275_RS07020;Dbxref=GenBank:WP_002209784.1;Name=WP_002209784.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005162151.1;locus_tag=YPIP275_RS07020;product=magnesium transporter;protein_id=WP_002209784.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 158048 159400 . + . ID=gene-YPIP275_RS07025;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=YPIP275_RS07025;old_locus_tag=YPIP275_1999 NZ_AAOS02000006.1 Protein Homology CDS 158048 159400 . + 0 ID=cds-WP_002209785.1;Parent=gene-YPIP275_RS07025;Dbxref=GenBank:WP_002209785.1;Name=WP_002209785.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717948.1;locus_tag=YPIP275_RS07025;product=molecular chaperone;protein_id=WP_002209785.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 159672 160520 . - . ID=gene-YPIP275_RS07030;Name=YPIP275_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07030;old_locus_tag=YPIP275_2000 NZ_AAOS02000006.1 Protein Homology CDS 159672 160520 . - 0 ID=cds-WP_002209786.1;Parent=gene-YPIP275_RS07030;Dbxref=GenBank:WP_002209786.1;Name=WP_002209786.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209786.1;locus_tag=YPIP275_RS07030;product=ABC transporter permease;protein_id=WP_002209786.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 160582 161847 . - . ID=gene-YPIP275_RS07035;Name=YPIP275_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07035;old_locus_tag=YPIP275_2001 NZ_AAOS02000006.1 Protein Homology CDS 160582 161847 . - 0 ID=cds-WP_002209787.1;Parent=gene-YPIP275_RS07035;Dbxref=GenBank:WP_002209787.1;Name=WP_002209787.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209787.1;locus_tag=YPIP275_RS07035;product=ABC transporter permease;protein_id=WP_002209787.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 161894 162922 . - . ID=gene-YPIP275_RS07040;Name=YPIP275_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07040;old_locus_tag=YPIP275_2002 NZ_AAOS02000006.1 Protein Homology CDS 161894 162922 . - 0 ID=cds-WP_002209788.1;Parent=gene-YPIP275_RS07040;Dbxref=GenBank:WP_002209788.1;Name=WP_002209788.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303866.1;locus_tag=YPIP275_RS07040;product=ABC transporter substrate-binding protein;protein_id=WP_002209788.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 162975 164264 . - . ID=gene-YPIP275_RS07045;Name=YPIP275_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07045;old_locus_tag=YPIP275_2003 NZ_AAOS02000006.1 Protein Homology CDS 162975 164264 . - 0 ID=cds-WP_002209789.1;Parent=gene-YPIP275_RS07045;Dbxref=GenBank:WP_002209789.1;Name=WP_002209789.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104823.1;locus_tag=YPIP275_RS07045;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_002209789.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 164446 165951 . + . ID=gene-YPIP275_RS07050;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=YPIP275_RS07050;old_locus_tag=YPIP275_2004 NZ_AAOS02000006.1 Protein Homology CDS 164446 165951 . + 0 ID=cds-WP_002209790.1;Parent=gene-YPIP275_RS07050;Dbxref=GenBank:WP_002209790.1;Name=WP_002209790.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303864.1;locus_tag=YPIP275_RS07050;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_002209790.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 166334 167419 . + . ID=gene-YPIP275_RS07055;Name=YPIP275_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07055;old_locus_tag=YPIP275_2005 NZ_AAOS02000006.1 Protein Homology CDS 166334 167419 . + 0 ID=cds-WP_002209791.1;Parent=gene-YPIP275_RS07055;Dbxref=GenBank:WP_002209791.1;Name=WP_002209791.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192780.1;locus_tag=YPIP275_RS07055;product=ABC transporter ATP-binding protein;protein_id=WP_002209791.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 167783 169117 . + . ID=gene-YPIP275_RS07060;Name=YPIP275_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07060;old_locus_tag=YPIP275_2006 NZ_AAOS02000006.1 Protein Homology CDS 167783 169117 . + 0 ID=cds-WP_002214676.1;Parent=gene-YPIP275_RS07060;Dbxref=GenBank:WP_002214676.1;Name=WP_002214676.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214676.1;locus_tag=YPIP275_RS07060;product=MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_002214676.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 169117 172275 . + . ID=gene-YPIP275_RS07065;Name=YPIP275_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07065;old_locus_tag=YPIP275_2007 NZ_AAOS02000006.1 Protein Homology CDS 169117 172275 . + 0 ID=cds-WP_002209793.1;Parent=gene-YPIP275_RS07065;Dbxref=GenBank:WP_002209793.1;Name=WP_002209793.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002401170.1;locus_tag=YPIP275_RS07065;product=MdtB/MuxB family multidrug efflux RND transporter permease subunit;protein_id=WP_002209793.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 172272 175346 . + . ID=gene-YPIP275_RS07070;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=YPIP275_RS07070;old_locus_tag=YPIP275_2008 NZ_AAOS02000006.1 Protein Homology CDS 172272 175346 . + 0 ID=cds-WP_002209794.1;Parent=gene-YPIP275_RS07070;Dbxref=GenBank:WP_002209794.1;Name=WP_002209794.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mdtC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815800.1;locus_tag=YPIP275_RS07070;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_002209794.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 175380 176777 . + . ID=gene-YPIP275_RS07075;Name=YPIP275_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07075;old_locus_tag=YPIP275_2009 NZ_AAOS02000006.1 Protein Homology CDS 175380 176777 . + 0 ID=cds-WP_002209795.1;Parent=gene-YPIP275_RS07075;Dbxref=GenBank:WP_002209795.1;Name=WP_002209795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002265210.1;locus_tag=YPIP275_RS07075;product=MFS transporter;protein_id=WP_002209795.1;transl_table=11 NZ_AAOS02000006.1 RefSeq pseudogene 176811 178192 . + . ID=gene-YPIP275_RS07080;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=pseudogene;locus_tag=YPIP275_RS07080;old_locus_tag=YPIP275_2010;pseudo=true NZ_AAOS02000006.1 Protein Homology CDS 176811 178192 . + 0 ID=cds-YPIP275_RS07080;Parent=gene-YPIP275_RS07080;Note=frameshifted;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004877329.1;locus_tag=YPIP275_RS07080;product=envelope stress sensor histidine kinase BaeS;pseudo=true;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 178202 178921 . + . ID=gene-YPIP275_RS07090;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=YPIP275_RS07090;old_locus_tag=YPIP275_2011 NZ_AAOS02000006.1 Protein Homology CDS 178202 178921 . + 0 ID=cds-WP_002209796.1;Parent=gene-YPIP275_RS07090;Dbxref=GenBank:WP_002209796.1;Name=WP_002209796.1;Ontology_term=GO:0000160,GO:2000142,GO:0003700;gbkey=CDS;gene=baeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216825.1;locus_tag=YPIP275_RS07090;product=envelope stress response regulator BaeR;protein_id=WP_002209796.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 179058 179396 . + . ID=gene-YPIP275_RS07095;Name=YPIP275_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07095;old_locus_tag=YPIP275_2012 NZ_AAOS02000006.1 Protein Homology CDS 179058 179396 . + 0 ID=cds-WP_002209797.1;Parent=gene-YPIP275_RS07095;Dbxref=GenBank:WP_002209797.1;Name=WP_002209797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209797.1;locus_tag=YPIP275_RS07095;product=YegP family protein;protein_id=WP_002209797.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 179671 181065 . + . ID=gene-YPIP275_RS07100;Name=trhP;gbkey=Gene;gene=trhP;gene_biotype=protein_coding;gene_synonym=yegQ;locus_tag=YPIP275_RS07100;old_locus_tag=YPIP275_2013 NZ_AAOS02000006.1 Protein Homology CDS 179671 181065 . + 0 ID=cds-WP_002209798.1;Parent=gene-YPIP275_RS07100;Dbxref=GenBank:WP_002209798.1;Name=WP_002209798.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhP;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209798.1;locus_tag=YPIP275_RS07100;product=prephenate-dependent tRNA uridine(34) hydroxylase TrhP;protein_id=WP_002209798.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 181701 182591 . + . ID=gene-YPIP275_RS07105;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=YPIP275_RS07105;old_locus_tag=YPIP275_2014 NZ_AAOS02000006.1 Protein Homology CDS 181701 182591 . + 0 ID=cds-WP_002209799.1;Parent=gene-YPIP275_RS07105;Dbxref=GenBank:WP_002209799.1;Name=WP_002209799.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209799.1;locus_tag=YPIP275_RS07105;product=lipid kinase YegS;protein_id=WP_002209799.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 182858 183367 . - . ID=gene-YPIP275_RS07110;Name=YPIP275_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07110;old_locus_tag=YPIP275_2015 NZ_AAOS02000006.1 Protein Homology CDS 182858 183367 . - 0 ID=cds-WP_002209800.1;Parent=gene-YPIP275_RS07110;Dbxref=GenBank:WP_002209800.1;Name=WP_002209800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583131.1;locus_tag=YPIP275_RS07110;product=inhibitor of vertebrate lysozyme family protein;protein_id=WP_002209800.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 183598 183768 . + . ID=gene-YPIP275_RS28520;Name=YPIP275_RS28520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28520 NZ_AAOS02000006.1 Protein Homology CDS 183598 183768 . + 0 ID=cds-WP_002228393.1;Parent=gene-YPIP275_RS28520;Dbxref=GenBank:WP_002228393.1;Name=WP_002228393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228393.1;locus_tag=YPIP275_RS28520;product=hypothetical protein;protein_id=WP_002228393.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 183740 184486 . + . ID=gene-YPIP275_RS07115;Name=YPIP275_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07115;old_locus_tag=YPIP275_2016 NZ_AAOS02000006.1 Protein Homology CDS 183740 184486 . + 0 ID=cds-WP_002232352.1;Parent=gene-YPIP275_RS07115;Dbxref=GenBank:WP_002232352.1;Name=WP_002232352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002232352.1;locus_tag=YPIP275_RS07115;product=hypothetical protein;protein_id=WP_002232352.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 184548 185348 . - . ID=gene-YPIP275_RS07120;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=YPIP275_RS07120;old_locus_tag=YPIP275_2017 NZ_AAOS02000006.1 Protein Homology CDS 184548 185348 . - 0 ID=cds-WP_002209801.1;Parent=gene-YPIP275_RS07120;Dbxref=GenBank:WP_002209801.1;Name=WP_002209801.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191877.1;locus_tag=YPIP275_RS07120;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_002209801.1;transl_table=11 NZ_AAOS02000006.1 cmsearch riboswitch 185472 185576 . - . ID=id-NZ_AAOS02000006.1:185472..185576;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_AAOS02000006.1 RefSeq gene 185870 186337 . + . ID=gene-YPIP275_RS07125;Name=YPIP275_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07125;old_locus_tag=YPIP275_2019 NZ_AAOS02000006.1 Protein Homology CDS 185870 186337 . + 0 ID=cds-WP_002209803.1;Parent=gene-YPIP275_RS07125;Dbxref=GenBank:WP_002209803.1;Name=WP_002209803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209803.1;locus_tag=YPIP275_RS07125;product=DUF943 family protein;protein_id=WP_002209803.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 186396 186674 . + . ID=gene-YPIP275_RS07130;Name=YPIP275_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07130;old_locus_tag=YPIP275_2020 NZ_AAOS02000006.1 Protein Homology CDS 186396 186674 . + 0 ID=cds-WP_002209804.1;Parent=gene-YPIP275_RS07130;Dbxref=GenBank:WP_002209804.1;Name=WP_002209804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906324.1;locus_tag=YPIP275_RS07130;product=hypothetical protein;protein_id=WP_002209804.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 186686 187894 . - . ID=gene-YPIP275_RS07135;Name=YPIP275_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07135;old_locus_tag=YPIP275_2021 NZ_AAOS02000006.1 Protein Homology CDS 186686 187894 . - 0 ID=cds-WP_002209743.1-22;Parent=gene-YPIP275_RS07135;Dbxref=GenBank:WP_002209743.1;Name=WP_002209743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=YPIP275_RS07135;product=IS256 family transposase;protein_id=WP_002209743.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 187985 188620 . + . ID=gene-YPIP275_RS07140;Name=YPIP275_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07140;old_locus_tag=YPIP275_2022 NZ_AAOS02000006.1 Protein Homology CDS 187985 188620 . + 0 ID=cds-WP_002209805.1;Parent=gene-YPIP275_RS07140;Dbxref=GenBank:WP_002209805.1;Name=WP_002209805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209805.1;locus_tag=YPIP275_RS07140;product=hypothetical protein;protein_id=WP_002209805.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 188617 189012 . + . ID=gene-YPIP275_RS07145;Name=YPIP275_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07145 NZ_AAOS02000006.1 Protein Homology CDS 188617 189012 . + 0 ID=cds-WP_002216980.1;Parent=gene-YPIP275_RS07145;Dbxref=GenBank:WP_002216980.1;Name=WP_002216980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216980.1;locus_tag=YPIP275_RS07145;product=DUF1240 domain-containing protein;protein_id=WP_002216980.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 189076 189471 . + . ID=gene-YPIP275_RS07150;Name=YPIP275_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07150 NZ_AAOS02000006.1 Protein Homology CDS 189076 189471 . + 0 ID=cds-WP_002216979.1;Parent=gene-YPIP275_RS07150;Dbxref=GenBank:WP_002216979.1;Name=WP_002216979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216979.1;locus_tag=YPIP275_RS07150;product=DUF1240 domain-containing protein;protein_id=WP_002216979.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 189533 189928 . + . ID=gene-YPIP275_RS07155;Name=YPIP275_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07155 NZ_AAOS02000006.1 Protein Homology CDS 189533 189928 . + 0 ID=cds-WP_002415472.1;Parent=gene-YPIP275_RS07155;Dbxref=GenBank:WP_002415472.1;Name=WP_002415472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002415472.1;locus_tag=YPIP275_RS07155;product=DUF1240 domain-containing protein;protein_id=WP_002415472.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 189992 190390 . + . ID=gene-YPIP275_RS07160;Name=YPIP275_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07160 NZ_AAOS02000006.1 Protein Homology CDS 189992 190390 . + 0 ID=cds-WP_002216975.1;Parent=gene-YPIP275_RS07160;Dbxref=GenBank:WP_002216975.1;Name=WP_002216975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216975.1;locus_tag=YPIP275_RS07160;product=DUF1240 domain-containing protein;protein_id=WP_002216975.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 190414 190893 . + . ID=gene-YPIP275_RS07165;Name=YPIP275_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07165;old_locus_tag=YPIP275_2023 NZ_AAOS02000006.1 Protein Homology CDS 190414 190893 . + 0 ID=cds-WP_002209806.1;Parent=gene-YPIP275_RS07165;Dbxref=GenBank:WP_002209806.1;Name=WP_002209806.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192795.1;locus_tag=YPIP275_RS07165;product=Hcp family type VI secretion system effector;protein_id=WP_002209806.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 191053 191511 . - . ID=gene-YPIP275_RS07170;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS07170;old_locus_tag=YPIP275_2024 NZ_AAOS02000006.1 Protein Homology CDS 191053 191511 . - 0 ID=cds-WP_002213775.1-31;Parent=gene-YPIP275_RS07170;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS07170;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 191766 192224 . - . ID=gene-YPIP275_RS07180;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS07180;old_locus_tag=YPIP275_2025 NZ_AAOS02000006.1 Protein Homology CDS 191766 192224 . - 0 ID=cds-WP_002213759.1-24;Parent=gene-YPIP275_RS07180;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS07180;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 192599 194176 . - . ID=gene-YPIP275_RS07190;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS07190;old_locus_tag=YPIP275_2026 NZ_AAOS02000006.1 Protein Homology CDS 192599 194176 . - 0 ID=cds-WP_002209807.1;Parent=gene-YPIP275_RS07190;Dbxref=GenBank:WP_002209807.1;Name=WP_002209807.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311396.1;locus_tag=YPIP275_RS07190;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_002209807.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 194356 195819 . - . ID=gene-YPIP275_RS07200;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=YPIP275_RS07200;old_locus_tag=YPIP275_2028 NZ_AAOS02000006.1 Protein Homology CDS 194356 195819 . - 0 ID=cds-WP_002227862.1;Parent=gene-YPIP275_RS07200;Dbxref=GenBank:WP_002227862.1;Name=WP_002227862.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227862.1;locus_tag=YPIP275_RS07200;product=IMP dehydrogenase;protein_id=WP_002227862.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 195989 197368 . + . ID=gene-YPIP275_RS07205;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=YPIP275_RS07205;old_locus_tag=YPIP275_2029 NZ_AAOS02000006.1 Protein Homology CDS 195989 197368 . + 0 ID=cds-WP_002209810.1;Parent=gene-YPIP275_RS07205;Dbxref=GenBank:WP_002209810.1;Name=WP_002209810.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209810.1;locus_tag=YPIP275_RS07205;product=exodeoxyribonuclease VII large subunit;protein_id=WP_002209810.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 197509 197733 . - . ID=gene-YPIP275_RS07210;Name=YPIP275_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07210;old_locus_tag=YPIP275_2030 NZ_AAOS02000006.1 Protein Homology CDS 197509 197733 . - 0 ID=cds-WP_002209811.1;Parent=gene-YPIP275_RS07210;Dbxref=GenBank:WP_002209811.1;Name=WP_002209811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209811.1;locus_tag=YPIP275_RS07210;product=zinc ribbon domain-containing protein;protein_id=WP_002209811.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 197782 198738 . - . ID=gene-YPIP275_RS07215;Name=YPIP275_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07215;old_locus_tag=YPIP275_2031 NZ_AAOS02000006.1 Protein Homology CDS 197782 198738 . - 0 ID=cds-WP_002209812.1;Parent=gene-YPIP275_RS07215;Dbxref=GenBank:WP_002209812.1;Name=WP_002209812.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081816.1;locus_tag=YPIP275_RS07215;product=AEC family transporter;protein_id=WP_002209812.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 199085 200572 . - . ID=gene-YPIP275_RS07220;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=YPIP275_RS07220;old_locus_tag=YPIP275_2032 NZ_AAOS02000006.1 Protein Homology CDS 199085 200572 . - 0 ID=cds-WP_002209813.1;Parent=gene-YPIP275_RS07220;Dbxref=GenBank:WP_002209813.1;Name=WP_002209813.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191901.1;locus_tag=YPIP275_RS07220;product=ribosome biogenesis GTPase Der;protein_id=WP_002209813.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 200720 201901 . - . ID=gene-YPIP275_RS07225;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=YPIP275_RS07225;old_locus_tag=YPIP275_2033 NZ_AAOS02000006.1 Protein Homology CDS 200720 201901 . - 0 ID=cds-WP_002209814.1;Parent=gene-YPIP275_RS07225;Dbxref=GenBank:WP_002209814.1;Name=WP_002209814.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650286.1;locus_tag=YPIP275_RS07225;product=outer membrane protein assembly factor BamB;protein_id=WP_002209814.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 201913 202548 . - . ID=gene-YPIP275_RS07230;Name=YPIP275_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07230;old_locus_tag=YPIP275_2034 NZ_AAOS02000006.1 Protein Homology CDS 201913 202548 . - 0 ID=cds-WP_002209815.1;Parent=gene-YPIP275_RS07230;Dbxref=GenBank:WP_002209815.1;Name=WP_002209815.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303850.1;locus_tag=YPIP275_RS07230;product=YfgM family protein;protein_id=WP_002209815.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 202562 203836 . - . ID=gene-YPIP275_RS07235;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=YPIP275_RS07235;old_locus_tag=YPIP275_2035 NZ_AAOS02000006.1 Protein Homology CDS 202562 203836 . - 0 ID=cds-WP_002209816.1;Parent=gene-YPIP275_RS07235;Dbxref=GenBank:WP_002209816.1;Name=WP_002209816.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875804.1;locus_tag=YPIP275_RS07235;product=histidine--tRNA ligase;protein_id=WP_002209816.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 204045 205172 . - . ID=gene-YPIP275_RS07240;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=YPIP275_RS07240;old_locus_tag=YPIP275_2036 NZ_AAOS02000006.1 Protein Homology CDS 204045 205172 . - 0 ID=cds-WP_002209817.1;Parent=gene-YPIP275_RS07240;Dbxref=GenBank:WP_002209817.1;Name=WP_002209817.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209817.1;locus_tag=YPIP275_RS07240;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_002209817.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 205234 206271 . - . ID=gene-YPIP275_RS07245;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=YPIP275_RS07245;old_locus_tag=YPIP275_2037 NZ_AAOS02000006.1 Protein Homology CDS 205234 206271 . - 0 ID=cds-WP_002209818.1;Parent=gene-YPIP275_RS07245;Dbxref=GenBank:WP_002209818.1;Name=WP_002209818.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209818.1;locus_tag=YPIP275_RS07245;product=cytoskeleton protein RodZ;protein_id=WP_002209818.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 206261 207010 . - . ID=gene-YPIP275_RS07250;Name=pilW;gbkey=Gene;gene=pilW;gene_biotype=protein_coding;locus_tag=YPIP275_RS07250;old_locus_tag=YPIP275_2038 NZ_AAOS02000006.1 Protein Homology CDS 206261 207010 . - 0 ID=cds-WP_002209819.1;Parent=gene-YPIP275_RS07250;Dbxref=GenBank:WP_002209819.1;Name=WP_002209819.1;Ontology_term=GO:0005515;gbkey=CDS;gene=pilW;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716157.1;locus_tag=YPIP275_RS07250;product=type IV pilus biogenesis/stability protein PilW;protein_id=WP_002209819.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 207164 208360 . - . ID=gene-YPIP275_RS07255;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;gene_synonym=trmG;locus_tag=YPIP275_RS07255;old_locus_tag=YPIP275_2039 NZ_AAOS02000006.1 Protein Homology CDS 207164 208360 . - 0 ID=cds-WP_002209820.1;Parent=gene-YPIP275_RS07255;Dbxref=GenBank:WP_002209820.1;Name=WP_002209820.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702451.1;locus_tag=YPIP275_RS07255;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_002209820.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 208622 209050 . - . ID=gene-YPIP275_RS07260;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=YPIP275_RS07260;old_locus_tag=YPIP275_2040 NZ_AAOS02000006.1 Protein Homology CDS 208622 209050 . - 0 ID=cds-WP_002209821.1;Parent=gene-YPIP275_RS07260;Dbxref=GenBank:WP_002209821.1;Name=WP_002209821.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104805.1;locus_tag=YPIP275_RS07260;product=nucleoside-diphosphate kinase;protein_id=WP_002209821.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 209377 211797 . - . ID=gene-YPIP275_RS07265;Name=YPIP275_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07265;old_locus_tag=YPIP275_2041 NZ_AAOS02000006.1 Protein Homology CDS 209377 211797 . - 0 ID=cds-WP_002215515.1;Parent=gene-YPIP275_RS07265;Dbxref=GenBank:WP_002215515.1;Name=WP_002215515.1;Ontology_term=GO:0098609,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cell-cell adhesion|0098609||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104804.1;locus_tag=YPIP275_RS07265;product=beta/gamma crystallin domain-containing protein;protein_id=WP_002215515.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 212487 216875 . + . ID=gene-YPIP275_RS07275;Name=yapA;gbkey=Gene;gene=yapA;gene_biotype=protein_coding;locus_tag=YPIP275_RS07275;old_locus_tag=YPIP275_2045 NZ_AAOS02000006.1 Protein Homology CDS 212487 216875 . + 0 ID=cds-WP_146737630.1;Parent=gene-YPIP275_RS07275;Dbxref=GenBank:WP_146737630.1;Name=WP_146737630.1;gbkey=CDS;gene=yapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906327.1;locus_tag=YPIP275_RS07275;product=autotransporter YapA;protein_id=WP_146737630.1;transl_table=11 NZ_AAOS02000006.1 RefSeq pseudogene 217433 220945 . + . ID=gene-YPIP275_RS07280;Name=yapB;gbkey=Gene;gene=yapB;gene_biotype=pseudogene;locus_tag=YPIP275_RS07280;old_locus_tag=YPIP275_2047;pseudo=true NZ_AAOS02000006.1 Protein Homology CDS 217433 220945 . + 0 ID=cds-YPIP275_RS07280;Parent=gene-YPIP275_RS07280;Note=YPO2887 is a pseudogene of yapB.%3B frameshifted;gbkey=CDS;gene=yapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192809.1;locus_tag=YPIP275_RS07280;product=autotransporter YapB;pseudo=true;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 220956 221081 . - . ID=gene-YPIP275_RS27065;Name=YPIP275_RS27065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS27065 NZ_AAOS02000006.1 Protein Homology CDS 220956 221081 . - 0 ID=cds-WP_071525548.1;Parent=gene-YPIP275_RS27065;Dbxref=GenBank:WP_071525548.1;Name=WP_071525548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378124.1;locus_tag=YPIP275_RS27065;product=gluconate 5-dehydrogenase;protein_id=WP_071525548.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 221215 222168 . - . ID=gene-YPIP275_RS07290;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=YPIP275_RS07290;old_locus_tag=YPIP275_2048 NZ_AAOS02000006.1 Protein Homology CDS 221215 222168 . - 0 ID=cds-WP_002209828.1;Parent=gene-YPIP275_RS07290;Dbxref=GenBank:WP_002209828.1;Name=WP_002209828.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016584813.1;locus_tag=YPIP275_RS07290;product=enhanced serine sensitivity protein SseB;protein_id=WP_002209828.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 222247 223545 . - . ID=gene-YPIP275_RS07295;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=YPIP275_RS07295;old_locus_tag=YPIP275_2049 NZ_AAOS02000006.1 Protein Homology CDS 222247 223545 . - 0 ID=cds-WP_002209829.1;Parent=gene-YPIP275_RS07295;Dbxref=GenBank:WP_002209829.1;Name=WP_002209829.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104798.1;locus_tag=YPIP275_RS07295;product=aminopeptidase PepB;protein_id=WP_002209829.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 223685 223885 . - . ID=gene-YPIP275_RS07300;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=YPIP275_RS07300;old_locus_tag=YPIP275_2050 NZ_AAOS02000006.1 Protein Homology CDS 223685 223885 . - 0 ID=cds-WP_002209830.1;Parent=gene-YPIP275_RS07300;Dbxref=GenBank:WP_002209830.1;Name=WP_002209830.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702435.1;locus_tag=YPIP275_RS07300;product=Fe-S cluster assembly protein IscX;protein_id=WP_002209830.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 223915 224250 . - . ID=gene-YPIP275_RS07305;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=YPIP275_RS07305;old_locus_tag=YPIP275_2051 NZ_AAOS02000006.1 Protein Homology CDS 223915 224250 . - 0 ID=cds-WP_002209831.1;Parent=gene-YPIP275_RS07305;Dbxref=GenBank:WP_002209831.1;Name=WP_002209831.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=YPIP275_RS07305;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_002209831.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 224253 226205 . - . ID=gene-YPIP275_RS07310;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=YPIP275_RS07310;old_locus_tag=YPIP275_2052 NZ_AAOS02000006.1 Protein Homology CDS 224253 226205 . - 0 ID=cds-WP_002209832.1;Parent=gene-YPIP275_RS07310;Dbxref=GenBank:WP_002209832.1;Name=WP_002209832.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209832.1;locus_tag=YPIP275_RS07310;product=Fe-S protein assembly chaperone HscA;protein_id=WP_002209832.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 226448 226972 . - . ID=gene-YPIP275_RS07315;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=YPIP275_RS07315;old_locus_tag=YPIP275_2053 NZ_AAOS02000006.1 Protein Homology CDS 226448 226972 . - 0 ID=cds-WP_002209833.1;Parent=gene-YPIP275_RS07315;Dbxref=GenBank:WP_002209833.1;Name=WP_002209833.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713941.1;locus_tag=YPIP275_RS07315;product=co-chaperone HscB;protein_id=WP_002209833.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 227083 227406 . - . ID=gene-YPIP275_RS07320;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=YPIP275_RS07320;old_locus_tag=YPIP275_2054 NZ_AAOS02000006.1 Protein Homology CDS 227083 227406 . - 0 ID=cds-WP_002209834.1;Parent=gene-YPIP275_RS07320;Dbxref=GenBank:WP_002209834.1;Name=WP_002209834.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228231.1;locus_tag=YPIP275_RS07320;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_002209834.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 227676 228062 . - . ID=gene-YPIP275_RS07325;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=YPIP275_RS07325;old_locus_tag=YPIP275_2055 NZ_AAOS02000006.1 Protein Homology CDS 227676 228062 . - 0 ID=cds-WP_002209835.1;Parent=gene-YPIP275_RS07325;Dbxref=GenBank:WP_002209835.1;Name=WP_002209835.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209835.1;locus_tag=YPIP275_RS07325;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_002209835.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 228093 229322 . - . ID=gene-YPIP275_RS07330;Name=YPIP275_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07330;old_locus_tag=YPIP275_2056 NZ_AAOS02000006.1 Protein Homology CDS 228093 229322 . - 0 ID=cds-WP_002209836.1;Parent=gene-YPIP275_RS07330;Dbxref=GenBank:WP_002209836.1;Name=WP_002209836.1;Ontology_term=GO:0044571,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=YPIP275_RS07330;product=IscS subfamily cysteine desulfurase;protein_id=WP_002209836.1;transl_table=11 NZ_AAOS02000006.1 RefSeq gene 229376 229733 . - . ID=gene-YPIP275_RS07335;Name=YPIP275_RS07335;end_range=229733,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS07335;old_locus_tag=YPIP275_2057;partial=true NZ_AAOS02000006.1 Protein Homology CDS 229376 229733 . - 1 ID=cds-WP_002209837.1;Parent=gene-YPIP275_RS07335;Dbxref=GenBank:WP_002209837.1;Name=WP_002209837.1;end_range=229733,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009638942.1;locus_tag=YPIP275_RS07335;partial=true;product=Rrf2 family transcriptional regulator;protein_id=WP_002209837.1;transl_table=11 ##sequence-region NZ_AAOS02000005.1 1 231874 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000005.1 RefSeq region 1 231874 . + . ID=NZ_AAOS02000005.1:1..231874;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000005.1 RefSeq gene 169 1032 . - . ID=gene-YPIP275_RS05270;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=YPIP275_RS05270;old_locus_tag=YPIP275_4467 NZ_AAOS02000005.1 Protein Homology CDS 169 1032 . - 0 ID=cds-WP_002228171.1;Parent=gene-YPIP275_RS05270;Dbxref=GenBank:WP_002228171.1;Name=WP_002228171.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807849.1;locus_tag=YPIP275_RS05270;product=glutamate racemase;protein_id=WP_002228171.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 977 2854 . - . ID=gene-YPIP275_RS05275;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=YPIP275_RS05275;old_locus_tag=YPIP275_4468 NZ_AAOS02000005.1 Protein Homology CDS 977 2854 . - 0 ID=cds-WP_002228170.1;Parent=gene-YPIP275_RS05275;Dbxref=GenBank:WP_002228170.1;Name=WP_002228170.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228170.1;locus_tag=YPIP275_RS05275;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_002228170.1;transl_table=11 NZ_AAOS02000005.1 cmsearch riboswitch 2942 3203 . - . ID=id-NZ_AAOS02000005.1:2942..3203;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_AAOS02000005.1 RefSeq gene 3334 4437 . + . ID=gene-YPIP275_RS05285;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05285;old_locus_tag=YPIP275_4469 NZ_AAOS02000005.1 Protein Homology CDS 3334 4437 . + 0 ID=cds-WP_002209474.1;Parent=gene-YPIP275_RS05285;Dbxref=GenBank:WP_002209474.1;Name=WP_002209474.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209474.1;locus_tag=YPIP275_RS05285;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_002209474.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 4571 4978 . - . ID=gene-YPIP275_RS05290;Name=YPIP275_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05290;old_locus_tag=YPIP275_4470 NZ_AAOS02000005.1 Protein Homology CDS 4571 4978 . - 0 ID=cds-WP_002209475.1;Parent=gene-YPIP275_RS05290;Dbxref=GenBank:WP_002209475.1;Name=WP_002209475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209475.1;locus_tag=YPIP275_RS05290;product=YijD family membrane protein;protein_id=WP_002209475.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 4991 5626 . - . ID=gene-YPIP275_RS05295;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=YPIP275_RS05295;old_locus_tag=YPIP275_4471 NZ_AAOS02000005.1 Protein Homology CDS 4991 5626 . - 0 ID=cds-WP_002209476.1;Parent=gene-YPIP275_RS05295;Dbxref=GenBank:WP_002209476.1;Name=WP_002209476.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209476.1;locus_tag=YPIP275_RS05295;product=HTH-type transcriptional repressor FabR;protein_id=WP_002209476.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 5844 7244 . + . ID=gene-YPIP275_RS05300;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05300;old_locus_tag=YPIP275_4473 NZ_AAOS02000005.1 Protein Homology CDS 5844 7244 . + 0 ID=cds-WP_002209477.1;Parent=gene-YPIP275_RS05300;Dbxref=GenBank:WP_002209477.1;Name=WP_002209477.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800705.1;locus_tag=YPIP275_RS05300;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_002209477.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 7227 8144 . - . ID=gene-YPIP275_RS05305;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=YPIP275_RS05305;old_locus_tag=YPIP275_4472 NZ_AAOS02000005.1 Protein Homology CDS 7227 8144 . - 0 ID=cds-WP_002209478.1;Parent=gene-YPIP275_RS05305;Dbxref=GenBank:WP_002209478.1;Name=WP_002209478.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191476.1;locus_tag=YPIP275_RS05305;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_002209478.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 8291 9022 . + . ID=gene-YPIP275_RS05310;Name=YPIP275_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05310;old_locus_tag=YPIP275_4474 NZ_AAOS02000005.1 Protein Homology CDS 8291 9022 . + 0 ID=cds-WP_002209479.1;Parent=gene-YPIP275_RS05310;Dbxref=GenBank:WP_002209479.1;Name=WP_002209479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209479.1;locus_tag=YPIP275_RS05310;product=glutathione peroxidase;protein_id=WP_002209479.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 9117 10580 . + . ID=gene-YPIP275_RS05315;Name=YPIP275_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05315;old_locus_tag=YPIP275_4475 NZ_AAOS02000005.1 Protein Homology CDS 9117 10580 . + 0 ID=cds-WP_002209480.1;Parent=gene-YPIP275_RS05315;Dbxref=GenBank:WP_002209480.1;Name=WP_002209480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209480.1;locus_tag=YPIP275_RS05315;product=dihydrolipoyl dehydrogenase;protein_id=WP_002209480.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 10696 11499 . - . ID=gene-YPIP275_RS05320;Name=YPIP275_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05320;old_locus_tag=YPIP275_4476 NZ_AAOS02000005.1 Protein Homology CDS 10696 11499 . - 0 ID=cds-WP_002209481.1;Parent=gene-YPIP275_RS05320;Dbxref=GenBank:WP_002209481.1;Name=WP_002209481.1;Ontology_term=GO:0031992,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=energy transducer activity|0031992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191474.1;locus_tag=YPIP275_RS05320;product=energy transducer TonB family protein;protein_id=WP_002209481.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 11564 12892 . - . ID=gene-YPIP275_RS05325;Name=YPIP275_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05325;old_locus_tag=YPIP275_4477 NZ_AAOS02000005.1 Protein Homology CDS 11564 12892 . - 0 ID=cds-WP_002209482.1;Parent=gene-YPIP275_RS05325;Dbxref=GenBank:WP_002209482.1;Name=WP_002209482.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304746.1;locus_tag=YPIP275_RS05325;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_002209482.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 12968 14776 . - . ID=gene-YPIP275_RS05330;Name=YPIP275_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05330;old_locus_tag=YPIP275_4478 NZ_AAOS02000005.1 Protein Homology CDS 12968 14776 . - 0 ID=cds-WP_002209483.1;Parent=gene-YPIP275_RS05330;Dbxref=GenBank:WP_002209483.1;Name=WP_002209483.1;Ontology_term=GO:0030253,GO:0005524,GO:0016887,GO:0034040,GO:0140359,GO:0030256;gbkey=CDS;go_component=type I protein secretion system complex|0030256||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012230143.1;locus_tag=YPIP275_RS05330;product=type I secretion system permease/ATPase;protein_id=WP_002209483.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 14942 15559 . - . ID=gene-YPIP275_RS05335;Name=YPIP275_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05335;old_locus_tag=YPIP275_4479 NZ_AAOS02000005.1 Protein Homology CDS 14942 15559 . - 0 ID=cds-WP_002209484.1;Parent=gene-YPIP275_RS05335;Dbxref=GenBank:WP_002209484.1;Name=WP_002209484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209484.1;locus_tag=YPIP275_RS05335;product=heme acquisition protein HasA;protein_id=WP_002209484.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 15781 18273 . - . ID=gene-YPIP275_RS05340;Name=YPIP275_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05340;old_locus_tag=YPIP275_4480 NZ_AAOS02000005.1 Protein Homology CDS 15781 18273 . - 0 ID=cds-WP_002209485.1;Parent=gene-YPIP275_RS05340;Dbxref=GenBank:WP_002209485.1;Name=WP_002209485.1;Ontology_term=GO:0055085,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191470.1;locus_tag=YPIP275_RS05340;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;protein_id=WP_002209485.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 18872 20245 . - . ID=gene-YPIP275_RS05350;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=YPIP275_RS05350;old_locus_tag=YPIP275_4482 NZ_AAOS02000005.1 Protein Homology CDS 18872 20245 . - 0 ID=cds-WP_002209487.1;Parent=gene-YPIP275_RS05350;Dbxref=GenBank:WP_002209487.1;Name=WP_002209487.1;Ontology_term=GO:0006526,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163844.1;locus_tag=YPIP275_RS05350;product=argininosuccinate lyase;protein_id=WP_002209487.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 20412 21188 . - . ID=gene-YPIP275_RS05355;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=YPIP275_RS05355;old_locus_tag=YPIP275_4483 NZ_AAOS02000005.1 Protein Homology CDS 20412 21188 . - 0 ID=cds-WP_002215335.1;Parent=gene-YPIP275_RS05355;Dbxref=GenBank:WP_002215335.1;Name=WP_002215335.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=L-ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215335.1;locus_tag=YPIP275_RS05355;product=acetylglutamate kinase;protein_id=WP_002215335.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 21354 22358 . - . ID=gene-YPIP275_RS05360;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=YPIP275_RS05360;old_locus_tag=YPIP275_4484 NZ_AAOS02000005.1 Protein Homology CDS 21354 22358 . - 0 ID=cds-WP_002209489.1;Parent=gene-YPIP275_RS05360;Dbxref=GenBank:WP_002209489.1;Name=WP_002209489.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,L-ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278246.1;locus_tag=YPIP275_RS05360;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_002209489.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 22609 23772 . + . ID=gene-YPIP275_RS05365;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=YPIP275_RS05365;old_locus_tag=YPIP275_4485 NZ_AAOS02000005.1 Protein Homology CDS 22609 23772 . + 0 ID=cds-WP_002223919.1;Parent=gene-YPIP275_RS05365;Dbxref=GenBank:WP_002223919.1;Name=WP_002223919.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223919.1;locus_tag=YPIP275_RS05365;product=acetylornithine deacetylase;protein_id=WP_002223919.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 24146 26782 . + . ID=gene-YPIP275_RS05370;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=YPIP275_RS05370;old_locus_tag=YPIP275_4486 NZ_AAOS02000005.1 Protein Homology CDS 24146 26782 . + 0 ID=cds-WP_002209491.1;Parent=gene-YPIP275_RS05370;Dbxref=GenBank:WP_002209491.1;Name=WP_002209491.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709756.1;locus_tag=YPIP275_RS05370;product=phosphoenolpyruvate carboxylase;protein_id=WP_002209491.1;transl_table=11 NZ_AAOS02000005.1 RefSeq pseudogene 27524 27730 . + . ID=gene-YPIP275_RS28460;Name=YPIP275_RS28460;end_range=27730,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28460;old_locus_tag=YPIP275_4487;partial=true;pseudo=true NZ_AAOS02000005.1 Protein Homology CDS 27524 27730 . + 0 ID=cds-YPIP275_RS28460;Parent=gene-YPIP275_RS28460;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=27730,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558220.1;locus_tag=YPIP275_RS28460;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 27796 28578 . - . ID=gene-YPIP275_RS05375;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS05375;old_locus_tag=YPIP275_4488 NZ_AAOS02000005.1 Protein Homology CDS 27796 28578 . - 0 ID=cds-WP_001317493.1-40;Parent=gene-YPIP275_RS05375;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS05375;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 28575 29597 . - . ID=gene-YPIP275_RS05380;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05380;old_locus_tag=YPIP275_4489 NZ_AAOS02000005.1 Protein Homology CDS 28575 29597 . - 0 ID=cds-WP_000255944.1-34;Parent=gene-YPIP275_RS05380;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS05380;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000005.1 RefSeq pseudogene 29684 30837 . + . ID=gene-YPIP275_RS05390;Name=YPIP275_RS05390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS05390;old_locus_tag=YPIP275_4491;partial=true;pseudo=true;start_range=.,29684 NZ_AAOS02000005.1 Protein Homology CDS 29684 30837 . + 0 ID=cds-YPIP275_RS05390;Parent=gene-YPIP275_RS05390;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558220.1;locus_tag=YPIP275_RS05390;partial=true;product=IS3-like element IS1661 family transposase;pseudo=true;start_range=.,29684;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 31192 31461 . - . ID=gene-YPIP275_RS05395;Name=YPIP275_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05395;old_locus_tag=YPIP275_4492 NZ_AAOS02000005.1 Protein Homology CDS 31192 31461 . - 0 ID=cds-WP_002209494.1;Parent=gene-YPIP275_RS05395;Dbxref=GenBank:WP_002209494.1;Name=WP_002209494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209494.1;locus_tag=YPIP275_RS05395;product=hypothetical protein;protein_id=WP_002209494.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 31626 32090 . - . ID=gene-YPIP275_RS05400;Name=YPIP275_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05400;old_locus_tag=YPIP275_4493 NZ_AAOS02000005.1 Protein Homology CDS 31626 32090 . - 0 ID=cds-WP_002209495.1;Parent=gene-YPIP275_RS05400;Dbxref=GenBank:WP_002209495.1;Name=WP_002209495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193247.1;locus_tag=YPIP275_RS05400;product=DUF943 family protein;protein_id=WP_002209495.1;transl_table=11 NZ_AAOS02000005.1 RefSeq pseudogene 32074 32235 . - . ID=gene-YPIP275_RS26920;Name=YPIP275_RS26920;end_range=32235,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS26920;partial=true;pseudo=true NZ_AAOS02000005.1 Protein Homology CDS 32074 32235 . - 0 ID=cds-YPIP275_RS26920;Parent=gene-YPIP275_RS26920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=32235,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230570.1;locus_tag=YPIP275_RS26920;partial=true;product=DUF3289 family protein;pseudo=true;transl_table=11 NZ_AAOS02000005.1 RefSeq pseudogene 33172 34593 . + . ID=gene-YPIP275_RS05410;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=pseudogene;locus_tag=YPIP275_RS05410;old_locus_tag=YPIP275_4494;partial=true;pseudo=true;start_range=.,33172 NZ_AAOS02000005.1 Protein Homology CDS 33172 34593 . + 0 ID=cds-YPIP275_RS05410;Parent=gene-YPIP275_RS05410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699669.1;locus_tag=YPIP275_RS05410;partial=true;product=glycerol-3-phosphate dehydrogenase;pseudo=true;start_range=.,33172;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 34756 37203 . - . ID=gene-YPIP275_RS05415;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=YPIP275_RS05415;old_locus_tag=YPIP275_4495 NZ_AAOS02000005.1 Protein Homology CDS 34756 37203 . - 0 ID=cds-WP_002209497.1;Parent=gene-YPIP275_RS05415;Dbxref=GenBank:WP_002209497.1;Name=WP_002209497.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013060332.1;locus_tag=YPIP275_RS05415;product=glycogen phosphorylase;protein_id=WP_002209497.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 37372 38802 . - . ID=gene-YPIP275_RS05420;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05420;old_locus_tag=YPIP275_4496 NZ_AAOS02000005.1 Protein Homology CDS 37372 38802 . - 0 ID=cds-WP_002209498.1;Parent=gene-YPIP275_RS05420;Dbxref=GenBank:WP_002209498.1;Name=WP_002209498.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005174770.1;locus_tag=YPIP275_RS05420;product=glycogen synthase GlgA;protein_id=WP_002209498.1;transl_table=11 NZ_AAOS02000005.1 RefSeq pseudogene 39013 40300 . - . ID=gene-YPIP275_RS05425;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=pseudogene;locus_tag=YPIP275_RS05425;old_locus_tag=YPIP275_4497;pseudo=true NZ_AAOS02000005.1 Protein Homology CDS 39013 40300 . - 0 ID=cds-YPIP275_RS05425;Parent=gene-YPIP275_RS05425;Note=frameshifted;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084100.1;locus_tag=YPIP275_RS05425;product=glucose-1-phosphate adenylyltransferase;pseudo=true;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 40310 42298 . - . ID=gene-YPIP275_RS05430;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=YPIP275_RS05430;old_locus_tag=YPIP275_4498 NZ_AAOS02000005.1 Protein Homology CDS 40310 42298 . - 0 ID=cds-WP_002209499.1;Parent=gene-YPIP275_RS05430;Dbxref=GenBank:WP_002209499.1;Name=WP_002209499.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002408599.1;locus_tag=YPIP275_RS05430;product=glycogen debranching protein GlgX;protein_id=WP_002209499.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 42300 44483 . - . ID=gene-YPIP275_RS05435;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=YPIP275_RS05435;old_locus_tag=YPIP275_4499 NZ_AAOS02000005.1 Protein Homology CDS 42300 44483 . - 0 ID=cds-WP_002209500.1;Parent=gene-YPIP275_RS05435;Dbxref=GenBank:WP_002209500.1;Name=WP_002209500.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193251.1;locus_tag=YPIP275_RS05435;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_002209500.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 44989 46686 . + . ID=gene-YPIP275_RS05440;Name=YPIP275_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05440;old_locus_tag=YPIP275_4501 NZ_AAOS02000005.1 Protein Homology CDS 44989 46686 . + 0 ID=cds-WP_002209502.1;Parent=gene-YPIP275_RS05440;Dbxref=GenBank:WP_002209502.1;Name=WP_002209502.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016584534.1;locus_tag=YPIP275_RS05440;product=sensor histidine kinase;protein_id=WP_002209502.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 46894 55935 . - . ID=gene-YPIP275_RS05445;Name=ilp;gbkey=Gene;gene=ilp;gene_biotype=protein_coding;locus_tag=YPIP275_RS05445;old_locus_tag=YPIP275_4502 NZ_AAOS02000005.1 Protein Homology CDS 46894 55935 . - 0 ID=cds-WP_002228169.1;Parent=gene-YPIP275_RS05445;Dbxref=GenBank:WP_002228169.1;Name=WP_002228169.1;gbkey=CDS;gene=ilp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228169.1;locus_tag=YPIP275_RS05445;product=inverse autotransporter adhesin Ilp;protein_id=WP_002228169.1;transl_table=11 NZ_AAOS02000005.1 RefSeq pseudogene 57379 57517 . - . ID=gene-YPIP275_RS28465;Name=YPIP275_RS28465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28465;old_locus_tag=YPIP275_4503;partial=true;pseudo=true;start_range=.,57379 NZ_AAOS02000005.1 Protein Homology CDS 57379 57517 . - 0 ID=cds-YPIP275_RS28465;Parent=gene-YPIP275_RS28465;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001690050.1;locus_tag=YPIP275_RS28465;partial=true;product=IS66-like element accessory protein TnpA;pseudo=true;start_range=.,57379;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 57671 57958 . - . ID=gene-YPIP275_RS05455;Name=YPIP275_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05455;old_locus_tag=YPIP275_4504 NZ_AAOS02000005.1 Protein Homology CDS 57671 57958 . - 0 ID=cds-WP_002209504.1;Parent=gene-YPIP275_RS05455;Dbxref=GenBank:WP_002209504.1;Name=WP_002209504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209504.1;locus_tag=YPIP275_RS05455;product=contact-dependent growth inhibition system immunity protein;protein_id=WP_002209504.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 57965 58264 . - . ID=gene-YPIP275_RS05460;Name=YPIP275_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05460;old_locus_tag=YPIP275_4505 NZ_AAOS02000005.1 Protein Homology CDS 57965 58264 . - 0 ID=cds-WP_002209505.1;Parent=gene-YPIP275_RS05460;Dbxref=GenBank:WP_002209505.1;Name=WP_002209505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209505.1;locus_tag=YPIP275_RS05460;product=contact-dependent growth inhibition system immunity protein;protein_id=WP_002209505.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 58284 58433 . - . ID=gene-YPIP275_RS28470;Name=YPIP275_RS28470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28470 NZ_AAOS02000005.1 Protein Homology CDS 58284 58433 . - 0 ID=cds-WP_157836657.1;Parent=gene-YPIP275_RS28470;Dbxref=GenBank:WP_157836657.1;Name=WP_157836657.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037816.7;locus_tag=YPIP275_RS28470;product=RNase A-like domain-containing protein;protein_id=WP_157836657.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 58580 58861 . - . ID=gene-YPIP275_RS05465;Name=YPIP275_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05465 NZ_AAOS02000005.1 Protein Homology CDS 58580 58861 . - 0 ID=cds-WP_002214584.1;Parent=gene-YPIP275_RS05465;Dbxref=GenBank:WP_002214584.1;Name=WP_002214584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214584.1;locus_tag=YPIP275_RS05465;product=contact-dependent growth inhibition system immunity protein;protein_id=WP_002214584.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 59030 60133 . - . ID=gene-YPIP275_RS05470;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=YPIP275_RS05470;old_locus_tag=YPIP275_4507 NZ_AAOS02000005.1 Protein Homology CDS 59030 60133 . - 0 ID=cds-WP_002209507.1;Parent=gene-YPIP275_RS05470;Dbxref=GenBank:WP_002209507.1;Name=WP_002209507.1;Ontology_term=GO:0009085,GO:0009088,GO:0071265,GO:1901705,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=L-lysine biosynthetic process|0009085||IEA,L-threonine biosynthetic process|0009088||IEA,L-methionine biosynthetic process|0071265||IEA,L-isoleucine biosynthetic process|1901705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009111079.1;locus_tag=YPIP275_RS05470;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_002209507.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 60491 61084 . + . ID=gene-YPIP275_RS05475;Name=YPIP275_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05475;old_locus_tag=YPIP275_4508 NZ_AAOS02000005.1 Protein Homology CDS 60491 61084 . + 0 ID=cds-WP_002209508.1;Parent=gene-YPIP275_RS05475;Dbxref=GenBank:WP_002209508.1;Name=WP_002209508.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209508.1;locus_tag=YPIP275_RS05475;product=YhgN family NAAT transporter;protein_id=WP_002209508.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 61324 61713 . - . ID=gene-YPIP275_RS05480;Name=YPIP275_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05480;old_locus_tag=YPIP275_4509 NZ_AAOS02000005.1 Protein Homology CDS 61324 61713 . - 0 ID=cds-WP_002209509.1;Parent=gene-YPIP275_RS05480;Dbxref=GenBank:WP_002209509.1;Name=WP_002209509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209509.1;locus_tag=YPIP275_RS05480;product=immunity protein Tsi6 family protein;protein_id=WP_002209509.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 61768 61908 . - . ID=gene-YPIP275_RS05485;Name=YPIP275_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05485;old_locus_tag=YPIP275_4510 NZ_AAOS02000005.1 Protein Homology CDS 61768 61908 . - 0 ID=cds-WP_002209510.1;Parent=gene-YPIP275_RS05485;Dbxref=GenBank:WP_002209510.1;Name=WP_002209510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209510.1;locus_tag=YPIP275_RS05485;product=hypothetical protein;protein_id=WP_002209510.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 61935 62102 . - . ID=gene-YPIP275_RS26930;Name=YPIP275_RS26930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26930 NZ_AAOS02000005.1 Protein Homology CDS 61935 62102 . - 0 ID=cds-WP_002214580.1;Parent=gene-YPIP275_RS26930;Dbxref=GenBank:WP_002214580.1;Name=WP_002214580.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045464.4;locus_tag=YPIP275_RS26930;product=DUF6883 domain-containing protein;protein_id=WP_002214580.1;transl_table=11 NZ_AAOS02000005.1 RefSeq pseudogene 62102 62332 . - . ID=gene-YPIP275_RS05490;Name=YPIP275_RS05490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS05490;old_locus_tag=YPIP275_4511;partial=true;pseudo=true;start_range=.,62102 NZ_AAOS02000005.1 Protein Homology CDS 62102 62332 . - 0 ID=cds-YPIP275_RS05490;Parent=gene-YPIP275_RS05490;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208839.1;locus_tag=YPIP275_RS05490;partial=true;product=DUF8093 domain-containing protein;pseudo=true;start_range=.,62102;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 62514 63017 . - . ID=gene-YPIP275_RS05495;Name=YPIP275_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05495;old_locus_tag=YPIP275_4512 NZ_AAOS02000005.1 Protein Homology CDS 62514 63017 . - 0 ID=cds-WP_002209512.1;Parent=gene-YPIP275_RS05495;Dbxref=GenBank:WP_002209512.1;Name=WP_002209512.1;Ontology_term=GO:0046177,GO:0005524,GO:0046316;gbkey=CDS;go_function=ATP binding|0005524||IEA,gluconokinase activity|0046316||IEA;go_process=obsolete D-gluconate catabolic process|0046177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209512.1;locus_tag=YPIP275_RS05495;product=gluconokinase;protein_id=WP_002209512.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 63234 64550 . + . ID=gene-YPIP275_RS05500;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=YPIP275_RS05500;old_locus_tag=YPIP275_4513 NZ_AAOS02000005.1 Protein Homology CDS 63234 64550 . + 0 ID=cds-WP_002209513.1;Parent=gene-YPIP275_RS05500;Dbxref=GenBank:WP_002209513.1;Name=WP_002209513.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105910.1;locus_tag=YPIP275_RS05500;product=gluconate transporter;protein_id=WP_002209513.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 64642 65637 . - . ID=gene-YPIP275_RS05505;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=YPIP275_RS05505;old_locus_tag=YPIP275_4514 NZ_AAOS02000005.1 Protein Homology CDS 64642 65637 . - 0 ID=cds-WP_002209514.1;Parent=gene-YPIP275_RS05505;Dbxref=GenBank:WP_002209514.1;Name=WP_002209514.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209514.1;locus_tag=YPIP275_RS05505;product=gluconate operon transcriptional repressor GntR;protein_id=WP_002209514.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 65766 66461 . - . ID=gene-YPIP275_RS05510;Name=YPIP275_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05510;old_locus_tag=YPIP275_4515 NZ_AAOS02000005.1 Protein Homology CDS 65766 66461 . - 0 ID=cds-WP_002209515.1;Parent=gene-YPIP275_RS05510;Dbxref=GenBank:WP_002209515.1;Name=WP_002209515.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209515.1;locus_tag=YPIP275_RS05510;product=pirin family protein;protein_id=WP_002209515.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 66590 66802 . - . ID=gene-YPIP275_RS26935;Name=YPIP275_RS26935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26935 NZ_AAOS02000005.1 Protein Homology CDS 66590 66802 . - 0 ID=cds-WP_002355529.1;Parent=gene-YPIP275_RS26935;Dbxref=GenBank:WP_002355529.1;Name=WP_002355529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002355529.1;locus_tag=YPIP275_RS26935;product=hypothetical protein;protein_id=WP_002355529.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 67225 67962 . + . ID=gene-YPIP275_RS05520;Name=YPIP275_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05520;old_locus_tag=YPIP275_4516 NZ_AAOS02000005.1 Protein Homology CDS 67225 67962 . + 0 ID=cds-WP_002209516.1;Parent=gene-YPIP275_RS05520;Dbxref=GenBank:WP_002209516.1;Name=WP_002209516.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209516.1;locus_tag=YPIP275_RS05520;product=response regulator transcription factor;protein_id=WP_002209516.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 68147 69154 . - . ID=gene-YPIP275_RS05525;Name=YPIP275_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05525;old_locus_tag=YPIP275_4518 NZ_AAOS02000005.1 Protein Homology CDS 68147 69154 . - 0 ID=cds-WP_002209518.1;Parent=gene-YPIP275_RS05525;Dbxref=GenBank:WP_002209518.1;Name=WP_002209518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209518.1;locus_tag=YPIP275_RS05525;product=adenosine kinase;protein_id=WP_002209518.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 69164 70024 . - . ID=gene-YPIP275_RS05530;Name=YPIP275_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05530;old_locus_tag=YPIP275_4519 NZ_AAOS02000005.1 Protein Homology CDS 69164 70024 . - 0 ID=cds-WP_002209519.1;Parent=gene-YPIP275_RS05530;Dbxref=GenBank:WP_002209519.1;Name=WP_002209519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209519.1;locus_tag=YPIP275_RS05530;product=ketose 1%2C6-bisphosphate aldolase;protein_id=WP_002209519.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 70050 70733 . - . ID=gene-YPIP275_RS05535;Name=YPIP275_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05535;old_locus_tag=YPIP275_4520 NZ_AAOS02000005.1 Protein Homology CDS 70050 70733 . - 0 ID=cds-WP_002209520.1;Parent=gene-YPIP275_RS05535;Dbxref=GenBank:WP_002209520.1;Name=WP_002209520.1;Ontology_term=GO:0043709,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209520.1;locus_tag=YPIP275_RS05535;product=D-lyxose/D-mannose isomerase;protein_id=WP_002209520.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 70808 71752 . - . ID=gene-YPIP275_RS05540;Name=YPIP275_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05540;old_locus_tag=YPIP275_4521 NZ_AAOS02000005.1 Protein Homology CDS 70808 71752 . - 0 ID=cds-WP_002209521.1;Parent=gene-YPIP275_RS05540;Dbxref=GenBank:WP_002209521.1;Name=WP_002209521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313098.1;locus_tag=YPIP275_RS05540;product=ABC transporter substrate-binding protein;protein_id=WP_002209521.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 71783 72775 . - . ID=gene-YPIP275_RS05545;Name=YPIP275_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05545;old_locus_tag=YPIP275_4522 NZ_AAOS02000005.1 Protein Homology CDS 71783 72775 . - 0 ID=cds-WP_002209522.1;Parent=gene-YPIP275_RS05545;Dbxref=GenBank:WP_002209522.1;Name=WP_002209522.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209522.1;locus_tag=YPIP275_RS05545;product=ABC transporter permease subunit;protein_id=WP_002209522.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 72768 74291 . - . ID=gene-YPIP275_RS05550;Name=YPIP275_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05550;old_locus_tag=YPIP275_4523 NZ_AAOS02000005.1 Protein Homology CDS 72768 74291 . - 0 ID=cds-WP_002209523.1;Parent=gene-YPIP275_RS05550;Dbxref=GenBank:WP_002209523.1;Name=WP_002209523.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303370.1;locus_tag=YPIP275_RS05550;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209523.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 74480 77035 . + . ID=gene-YPIP275_RS05555;Name=YPIP275_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05555;old_locus_tag=YPIP275_4524 NZ_AAOS02000005.1 Protein Homology CDS 74480 77035 . + 0 ID=cds-WP_002209524.1;Parent=gene-YPIP275_RS05555;Dbxref=GenBank:WP_002209524.1;Name=WP_002209524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303369.1;locus_tag=YPIP275_RS05555;product=ATP-binding protein;protein_id=WP_002209524.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 77171 78367 . - . ID=gene-YPIP275_RS05560;Name=YPIP275_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05560;old_locus_tag=YPIP275_4525 NZ_AAOS02000005.1 Protein Homology CDS 77171 78367 . - 0 ID=cds-WP_002215486.1;Parent=gene-YPIP275_RS05560;Dbxref=GenBank:WP_002215486.1;Name=WP_002215486.1;Ontology_term=GO:0016628,GO:0050660,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193266.1;locus_tag=YPIP275_RS05560;product=BaiN/RdsA family NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_002215486.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 78678 80174 . + . ID=gene-YPIP275_RS05565;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05565;old_locus_tag=YPIP275_4526 NZ_AAOS02000005.1 Protein Homology CDS 78678 80174 . + 0 ID=cds-WP_002209526.1;Parent=gene-YPIP275_RS05565;Dbxref=GenBank:WP_002209526.1;Name=WP_002209526.1;Ontology_term=GO:0006817,GO:0005315,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193267.1;locus_tag=YPIP275_RS05565;product=inorganic phosphate transporter PitA;protein_id=WP_002209526.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 80440 80898 . + . ID=gene-YPIP275_RS05570;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05570;old_locus_tag=YPIP275_4527 NZ_AAOS02000005.1 Protein Homology CDS 80440 80898 . + 0 ID=cds-WP_002213759.1-25;Parent=gene-YPIP275_RS05570;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS05570;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 81031 81366 . - . ID=gene-YPIP275_RS05575;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=YPIP275_RS05575;old_locus_tag=YPIP275_4528 NZ_AAOS02000005.1 Protein Homology CDS 81031 81366 . - 0 ID=cds-WP_002209527.1;Parent=gene-YPIP275_RS05575;Dbxref=GenBank:WP_002209527.1;Name=WP_002209527.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442989.1;locus_tag=YPIP275_RS05575;product=universal stress protein UspB;protein_id=WP_002209527.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 82074 82520 . + . ID=gene-YPIP275_RS05580;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05580;old_locus_tag=YPIP275_4529 NZ_AAOS02000005.1 Protein Homology CDS 82074 82520 . + 0 ID=cds-WP_002209528.1;Parent=gene-YPIP275_RS05580;Dbxref=GenBank:WP_002209528.1;Name=WP_002209528.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707161.1;locus_tag=YPIP275_RS05580;product=universal stress protein UspA;protein_id=WP_002209528.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 82767 84110 . + . ID=gene-YPIP275_RS05585;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05585;old_locus_tag=YPIP275_4530 NZ_AAOS02000005.1 Protein Homology CDS 82767 84110 . + 0 ID=cds-WP_002209529.1;Parent=gene-YPIP275_RS05585;Dbxref=GenBank:WP_002209529.1;Name=WP_002209529.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012230168.1;locus_tag=YPIP275_RS05585;product=NADP-specific glutamate dehydrogenase;protein_id=WP_002209529.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 84358 85692 . + . ID=gene-YPIP275_RS05590;Name=YPIP275_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05590;old_locus_tag=YPIP275_4531 NZ_AAOS02000005.1 Protein Homology CDS 84358 85692 . + 0 ID=cds-WP_002209530.1;Parent=gene-YPIP275_RS05590;Dbxref=GenBank:WP_002209530.1;Name=WP_002209530.1;Ontology_term=GO:0005509,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_function=calcium ion binding|0005509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414110.1;locus_tag=YPIP275_RS05590;product=M10 family metallopeptidase C-terminal domain-containing protein;protein_id=WP_002209530.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 85757 86527 . - . ID=gene-YPIP275_RS05595;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS05595;old_locus_tag=YPIP275_4532 NZ_AAOS02000005.1 Protein Homology CDS 85757 86527 . - 0 ID=cds-WP_002215483.1;Parent=gene-YPIP275_RS05595;Dbxref=GenBank:WP_002215483.1;Name=WP_002215483.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683790.1;locus_tag=YPIP275_RS05595;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_002215483.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 86531 88573 . - . ID=gene-YPIP275_RS05600;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=YPIP275_RS05600;old_locus_tag=YPIP275_4533 NZ_AAOS02000005.1 Protein Homology CDS 86531 88573 . - 0 ID=cds-WP_002209531.1;Parent=gene-YPIP275_RS05600;Dbxref=GenBank:WP_002209531.1;Name=WP_002209531.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084127.1;locus_tag=YPIP275_RS05600;product=oligopeptidase A;protein_id=WP_002209531.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 88902 89744 . + . ID=gene-YPIP275_RS05605;Name=YPIP275_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05605;old_locus_tag=YPIP275_4535 NZ_AAOS02000005.1 Protein Homology CDS 88902 89744 . + 0 ID=cds-WP_002209533.1;Parent=gene-YPIP275_RS05605;Dbxref=GenBank:WP_002209533.1;Name=WP_002209533.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=YPIP275_RS05605;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_002209533.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 89930 91282 . + . ID=gene-YPIP275_RS05610;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05610;old_locus_tag=YPIP275_4536 NZ_AAOS02000005.1 Protein Homology CDS 89930 91282 . + 0 ID=cds-WP_002209534.1;Parent=gene-YPIP275_RS05610;Dbxref=GenBank:WP_002209534.1;Name=WP_002209534.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=YPIP275_RS05610;product=glutathione-disulfide reductase;protein_id=WP_002209534.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 91474 92601 . + . ID=gene-YPIP275_RS05615;Name=YPIP275_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05615;old_locus_tag=YPIP275_4537 NZ_AAOS02000005.1 Protein Homology CDS 91474 92601 . + 0 ID=cds-WP_002209535.1;Parent=gene-YPIP275_RS05615;Dbxref=GenBank:WP_002209535.1;Name=WP_002209535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105925.1;locus_tag=YPIP275_RS05615;product=PucR family transcriptional regulator;protein_id=WP_002209535.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 92564 92776 . - . ID=gene-YPIP275_RS26940;Name=YPIP275_RS26940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26940 NZ_AAOS02000005.1 Protein Homology CDS 92564 92776 . - 0 ID=cds-WP_002227114.1;Parent=gene-YPIP275_RS26940;Dbxref=GenBank:WP_002227114.1;Name=WP_002227114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227114.1;locus_tag=YPIP275_RS26940;product=hypothetical protein;protein_id=WP_002227114.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 92779 94047 . + . ID=gene-YPIP275_RS05620;Name=YPIP275_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05620;old_locus_tag=YPIP275_4538 NZ_AAOS02000005.1 Protein Homology CDS 92779 94047 . + 0 ID=cds-WP_002209536.1;Parent=gene-YPIP275_RS05620;Dbxref=GenBank:WP_002209536.1;Name=WP_002209536.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=YPIP275_RS05620;product=GntP family permease;protein_id=WP_002209536.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 94058 95194 . + . ID=gene-YPIP275_RS05625;Name=YPIP275_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05625;old_locus_tag=YPIP275_4539 NZ_AAOS02000005.1 Protein Homology CDS 94058 95194 . + 0 ID=cds-WP_002209537.1;Parent=gene-YPIP275_RS05625;Dbxref=GenBank:WP_002209537.1;Name=WP_002209537.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414111.1;locus_tag=YPIP275_RS05625;product=glycerate kinase;protein_id=WP_002209537.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 95440 95946 . - . ID=gene-YPIP275_RS05630;Name=YPIP275_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05630;old_locus_tag=YPIP275_4540 NZ_AAOS02000005.1 Protein Homology CDS 95440 95946 . - 0 ID=cds-WP_002209538.1;Parent=gene-YPIP275_RS05630;Dbxref=GenBank:WP_002209538.1;Name=WP_002209538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209538.1;locus_tag=YPIP275_RS05630;product=DUF943 family protein;protein_id=WP_002209538.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 96014 96511 . - . ID=gene-YPIP275_RS05635;Name=YPIP275_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05635;old_locus_tag=YPIP275_4541 NZ_AAOS02000005.1 Protein Homology CDS 96014 96511 . - 0 ID=cds-WP_002209539.1;Parent=gene-YPIP275_RS05635;Dbxref=GenBank:WP_002209539.1;Name=WP_002209539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209539.1;locus_tag=YPIP275_RS05635;product=DUF943 family protein;protein_id=WP_002209539.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 96513 97382 . - . ID=gene-YPIP275_RS05640;Name=YPIP275_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05640;old_locus_tag=YPIP275_4542 NZ_AAOS02000005.1 Protein Homology CDS 96513 97382 . - 0 ID=cds-WP_002214774.1;Parent=gene-YPIP275_RS05640;Dbxref=GenBank:WP_002214774.1;Name=WP_002214774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105930.1;locus_tag=YPIP275_RS05640;product=DUF3289 family protein;protein_id=WP_002214774.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 97470 100682 . - . ID=gene-YPIP275_RS05645;Name=yapE;gbkey=Gene;gene=yapE;gene_biotype=protein_coding;locus_tag=YPIP275_RS05645;old_locus_tag=YPIP275_4543 NZ_AAOS02000005.1 Protein Homology CDS 97470 100682 . - 0 ID=cds-WP_002214773.1;Parent=gene-YPIP275_RS05645;Dbxref=GenBank:WP_002214773.1;Name=WP_002214773.1;gbkey=CDS;gene=yapE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214773.1;locus_tag=YPIP275_RS05645;product=autotransporter adhesin YapE;protein_id=WP_002214773.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 101360 102442 . + . ID=gene-YPIP275_RS05650;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=YPIP275_RS05650;old_locus_tag=YPIP275_4546 NZ_AAOS02000005.1 Protein Homology CDS 101360 102442 . + 0 ID=cds-WP_002209545.1;Parent=gene-YPIP275_RS05650;Dbxref=GenBank:WP_002209545.1;Name=WP_002209545.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674013.1;locus_tag=YPIP275_RS05650;product=inner membrane protein YhjD;protein_id=WP_002209545.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 102446 103243 . + . ID=gene-YPIP275_RS05655;Name=YPIP275_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05655;old_locus_tag=YPIP275_4548 NZ_AAOS02000005.1 Protein Homology CDS 102446 103243 . + 0 ID=cds-WP_002209546.1;Parent=gene-YPIP275_RS05655;Dbxref=GenBank:WP_002209546.1;Name=WP_002209546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209546.1;locus_tag=YPIP275_RS05655;product=CDP-diacylglycerol diphosphatase;protein_id=WP_002209546.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 103220 105442 . - . ID=gene-YPIP275_RS05660;Name=YPIP275_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05660;old_locus_tag=YPIP275_4547 NZ_AAOS02000005.1 Protein Homology CDS 103220 105442 . - 0 ID=cds-WP_002214772.1;Parent=gene-YPIP275_RS05660;Dbxref=GenBank:WP_002214772.1;Name=WP_002214772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214772.1;locus_tag=YPIP275_RS05660;product=AsmA family protein;protein_id=WP_002214772.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 105747 106592 . - . ID=gene-YPIP275_RS05665;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=YPIP275_RS05665;old_locus_tag=YPIP275_4549 NZ_AAOS02000005.1 Protein Homology CDS 105747 106592 . - 0 ID=cds-WP_002209547.1;Parent=gene-YPIP275_RS05665;Dbxref=GenBank:WP_002209547.1;Name=WP_002209547.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209547.1;locus_tag=YPIP275_RS05665;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_002209547.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 106811 107011 . + . ID=gene-YPIP275_RS05670;Name=YPIP275_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05670;old_locus_tag=YPIP275_4550 NZ_AAOS02000005.1 Protein Homology CDS 106811 107011 . + 0 ID=cds-WP_002209548.1;Parent=gene-YPIP275_RS05670;Dbxref=GenBank:WP_002209548.1;Name=WP_002209548.1;Ontology_term=GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105936.1;locus_tag=YPIP275_RS05670;product=2-hydroxymuconate tautomerase family protein;protein_id=WP_002209548.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 107290 108234 . + . ID=gene-YPIP275_RS05675;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;locus_tag=YPIP275_RS05675;old_locus_tag=YPIP275_4551 NZ_AAOS02000005.1 Protein Homology CDS 107290 108234 . + 0 ID=cds-WP_002209549.1;Parent=gene-YPIP275_RS05675;Dbxref=GenBank:WP_002209549.1;Name=WP_002209549.1;Ontology_term=GO:0000166,GO:0005524,GO:0008673;gbkey=CDS;gene=kdgK;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,2-dehydro-3-deoxygluconokinase activity|0008673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193283.1;locus_tag=YPIP275_RS05675;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_002209549.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 108398 109897 . - . ID=gene-YPIP275_RS05680;Name=YPIP275_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05680;old_locus_tag=YPIP275_4552 NZ_AAOS02000005.1 Protein Homology CDS 108398 109897 . - 0 ID=cds-WP_002209550.1;Parent=gene-YPIP275_RS05680;Dbxref=GenBank:WP_002209550.1;Name=WP_002209550.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209550.1;locus_tag=YPIP275_RS05680;product=M16 family metallopeptidase;protein_id=WP_002209550.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 110262 111551 . - . ID=gene-YPIP275_RS05685;Name=YPIP275_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05685;old_locus_tag=YPIP275_4554 NZ_AAOS02000005.1 Protein Homology CDS 110262 111551 . - 0 ID=cds-WP_002209553.1;Parent=gene-YPIP275_RS05685;Dbxref=GenBank:WP_002209553.1;Name=WP_002209553.1;Ontology_term=GO:0006835,GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105938.1;locus_tag=YPIP275_RS05685;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_002209553.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 112006 112485 . - . ID=gene-YPIP275_RS05690;Name=YPIP275_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05690;old_locus_tag=YPIP275_4555 NZ_AAOS02000005.1 Protein Homology CDS 112006 112485 . - 0 ID=cds-WP_002209554.1;Parent=gene-YPIP275_RS05690;Dbxref=GenBank:WP_002209554.1;Name=WP_002209554.1;Ontology_term=GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209554.1;locus_tag=YPIP275_RS05690;product=discoidin domain-containing protein;protein_id=WP_002209554.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 112610 114328 . - . ID=gene-YPIP275_RS05695;Name=YPIP275_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05695;old_locus_tag=YPIP275_4556 NZ_AAOS02000005.1 Protein Homology CDS 112610 114328 . - 0 ID=cds-WP_002209555.1;Parent=gene-YPIP275_RS05695;Dbxref=GenBank:WP_002209555.1;Name=WP_002209555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084136.1;locus_tag=YPIP275_RS05695;product=pectate lyase;protein_id=WP_002209555.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 114574 115278 . - . ID=gene-YPIP275_RS05700;Name=YPIP275_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05700;old_locus_tag=YPIP275_4558 NZ_AAOS02000005.1 Protein Homology CDS 114574 115278 . - 0 ID=cds-WP_002209559.1;Parent=gene-YPIP275_RS05700;Dbxref=GenBank:WP_002209559.1;Name=WP_002209559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004876906.1;locus_tag=YPIP275_RS05700;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_002209559.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 115918 117933 . - . ID=gene-YPIP275_RS05705;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=YPIP275_RS05705;old_locus_tag=YPIP275_4559 NZ_AAOS02000005.1 Protein Homology CDS 115918 117933 . - 0 ID=cds-WP_002209560.1;Parent=gene-YPIP275_RS05705;Dbxref=GenBank:WP_002209560.1;Name=WP_002209560.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209560.1;locus_tag=YPIP275_RS05705;product=biofilm formation regulator HmsP;protein_id=WP_002209560.1;transl_table=11 NZ_AAOS02000005.1 RefSeq pseudogene 118247 119361 . - . ID=gene-YPIP275_RS05710;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=pseudogene;locus_tag=YPIP275_RS05710;old_locus_tag=YPIP275_4560;pseudo=true NZ_AAOS02000005.1 Protein Homology CDS 118247 119361 . - 0 ID=cds-YPIP275_RS05710;Parent=gene-YPIP275_RS05710;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193286.1;locus_tag=YPIP275_RS05710;product=cellulose synthase complex periplasmic endoglucanase BcsZ;pseudo=true;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 119465 120502 . - . ID=gene-YPIP275_RS05715;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=YPIP275_RS05715;old_locus_tag=YPIP275_4561 NZ_AAOS02000005.1 Protein Homology CDS 119465 120502 . - 0 ID=cds-WP_196332080.1;Parent=gene-YPIP275_RS05715;Dbxref=GenBank:WP_196332080.1;Name=WP_196332080.1;Ontology_term=GO:0042938,GO:0071916,GO:0016020;gbkey=CDS;gene=dppF;go_component=membrane|0016020||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209561.1;locus_tag=YPIP275_RS05715;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_196332080.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 120538 121518 . - . ID=gene-YPIP275_RS05720;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=YPIP275_RS05720;old_locus_tag=YPIP275_4562 NZ_AAOS02000005.1 Protein Homology CDS 120538 121518 . - 0 ID=cds-WP_002209562.1;Parent=gene-YPIP275_RS05720;Dbxref=GenBank:WP_002209562.1;Name=WP_002209562.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229355.1;locus_tag=YPIP275_RS05720;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_002209562.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 121532 122434 . - . ID=gene-YPIP275_RS05725;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=YPIP275_RS05725;old_locus_tag=YPIP275_4563 NZ_AAOS02000005.1 Protein Homology CDS 121532 122434 . - 0 ID=cds-WP_002209563.1;Parent=gene-YPIP275_RS05725;Dbxref=GenBank:WP_002209563.1;Name=WP_002209563.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457611.1;locus_tag=YPIP275_RS05725;product=dipeptide ABC transporter permease DppC;protein_id=WP_002209563.1;transl_table=11 NZ_AAOS02000005.1 RefSeq pseudogene 122445 123463 . - . ID=gene-YPIP275_RS05730;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=pseudogene;locus_tag=YPIP275_RS05730;old_locus_tag=YPIP275_4564;pseudo=true NZ_AAOS02000005.1 Protein Homology CDS 122445 123463 . - 0 ID=cds-YPIP275_RS05730;Parent=gene-YPIP275_RS05730;Note=frameshifted;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=YPIP275_RS05730;product=dipeptide ABC transporter permease DppB;pseudo=true;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 123746 125353 . - . ID=gene-YPIP275_RS05735;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05735;old_locus_tag=YPIP275_4565 NZ_AAOS02000005.1 Protein Homology CDS 123746 125353 . - 0 ID=cds-WP_002209564.1;Parent=gene-YPIP275_RS05735;Dbxref=GenBank:WP_002209564.1;Name=WP_002209564.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=YPIP275_RS05735;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_002209564.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 125756 125962 . - . ID=gene-YPIP275_RS05740;Name=YPIP275_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05740 NZ_AAOS02000005.1 Protein Homology CDS 125756 125962 . - 0 ID=cds-WP_002217329.1;Parent=gene-YPIP275_RS05740;Dbxref=GenBank:WP_002217329.1;Name=WP_002217329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217329.1;locus_tag=YPIP275_RS05740;product=hypothetical protein;protein_id=WP_002217329.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 126022 127701 . - . ID=gene-YPIP275_RS05745;Name=YPIP275_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05745;old_locus_tag=YPIP275_4566 NZ_AAOS02000005.1 Protein Homology CDS 126022 127701 . - 0 ID=cds-WP_002222139.1;Parent=gene-YPIP275_RS05745;Dbxref=GenBank:WP_002222139.1;Name=WP_002222139.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222139.1;locus_tag=YPIP275_RS05745;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_002222139.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 127894 129285 . - . ID=gene-YPIP275_RS05750;Name=YPIP275_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05750;old_locus_tag=YPIP275_4567 NZ_AAOS02000005.1 Protein Homology CDS 127894 129285 . - 0 ID=cds-WP_002224153.1;Parent=gene-YPIP275_RS05750;Dbxref=GenBank:WP_002224153.1;Name=WP_002224153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016588330.1;locus_tag=YPIP275_RS05750;product=two-partner secretion domain-containing protein;protein_id=WP_002224153.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 129598 129674 . - . ID=gene-YPIP275_RS05755;Name=YPIP275_RS05755;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS05755;old_locus_tag=YPIP275_4568 NZ_AAOS02000005.1 tRNAscan-SE tRNA 129598 129674 . - . ID=rna-YPIP275_RS05755;Parent=gene-YPIP275_RS05755;anticodon=(pos:complement(129638..129640));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS05755;product=tRNA-Pro NZ_AAOS02000005.1 tRNAscan-SE exon 129598 129674 . - . ID=exon-YPIP275_RS05755-1;Parent=rna-YPIP275_RS05755;anticodon=(pos:complement(129638..129640));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS05755;product=tRNA-Pro NZ_AAOS02000005.1 RefSeq gene 129791 131122 . - . ID=gene-YPIP275_RS05760;Name=YPIP275_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05760;old_locus_tag=YPIP275_4569 NZ_AAOS02000005.1 Protein Homology CDS 129791 131122 . - 0 ID=cds-WP_002209567.1;Parent=gene-YPIP275_RS05760;Dbxref=GenBank:WP_002209567.1;Name=WP_002209567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683791.1;locus_tag=YPIP275_RS05760;product=MFS transporter;protein_id=WP_002209567.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 131217 131927 . - . ID=gene-YPIP275_RS05765;Name=YPIP275_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05765;old_locus_tag=YPIP275_4570 NZ_AAOS02000005.1 Protein Homology CDS 131217 131927 . - 0 ID=cds-WP_002209568.1;Parent=gene-YPIP275_RS05765;Dbxref=GenBank:WP_002209568.1;Name=WP_002209568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209568.1;locus_tag=YPIP275_RS05765;product=ATP-binding protein;protein_id=WP_002209568.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 132022 132804 . - . ID=gene-YPIP275_RS05770;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS05770;old_locus_tag=YPIP275_4571 NZ_AAOS02000005.1 Protein Homology CDS 132022 132804 . - 0 ID=cds-WP_001317493.1-41;Parent=gene-YPIP275_RS05770;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS05770;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 132801 133823 . - . ID=gene-YPIP275_RS05775;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05775;old_locus_tag=YPIP275_4572 NZ_AAOS02000005.1 Protein Homology CDS 132801 133823 . - 0 ID=cds-WP_000255944.1-35;Parent=gene-YPIP275_RS05775;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS05775;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000005.1 RefSeq pseudogene 133911 134705 . - . ID=gene-YPIP275_RS05780;Name=YPIP275_RS05780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS05780;old_locus_tag=YPIP275_4573;partial=true;pseudo=true;start_range=.,133911 NZ_AAOS02000005.1 Protein Homology CDS 133911 134705 . - 0 ID=cds-YPIP275_RS05780;Parent=gene-YPIP275_RS05780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081398.1;locus_tag=YPIP275_RS05780;partial=true;product=MASE1 domain-containing protein;pseudo=true;start_range=.,133911;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 134702 135292 . - . ID=gene-YPIP275_RS05785;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05785;old_locus_tag=YPIP275_4574 NZ_AAOS02000005.1 Protein Homology CDS 134702 135292 . - 0 ID=cds-WP_002209570.1;Parent=gene-YPIP275_RS05785;Dbxref=GenBank:WP_002209570.1;Name=WP_002209570.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303350.1;locus_tag=YPIP275_RS05785;product=response regulator transcription factor UhpA;protein_id=WP_002209570.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 135408 137099 . - . ID=gene-YPIP275_RS05790;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=YPIP275_RS05790;old_locus_tag=YPIP275_4575 NZ_AAOS02000005.1 Protein Homology CDS 135408 137099 . - 0 ID=cds-WP_002209571.1;Parent=gene-YPIP275_RS05790;Dbxref=GenBank:WP_002209571.1;Name=WP_002209571.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220725.1;locus_tag=YPIP275_RS05790;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_002209571.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 137628 139091 . - . ID=gene-YPIP275_RS05795;Name=YPIP275_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05795;old_locus_tag=YPIP275_4576 NZ_AAOS02000005.1 Protein Homology CDS 137628 139091 . - 0 ID=cds-WP_002209573.1;Parent=gene-YPIP275_RS05795;Dbxref=GenBank:WP_002209573.1;Name=WP_002209573.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209573.1;locus_tag=YPIP275_RS05795;product=alpha/beta hydrolase;protein_id=WP_002209573.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 139559 140962 . - . ID=gene-YPIP275_RS05800;Name=YPIP275_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05800;old_locus_tag=YPIP275_4578 NZ_AAOS02000005.1 Protein Homology CDS 139559 140962 . - 0 ID=cds-WP_002214368.1;Parent=gene-YPIP275_RS05800;Dbxref=GenBank:WP_002214368.1;Name=WP_002214368.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002429843.1;locus_tag=YPIP275_RS05800;product=amino acid permease;protein_id=WP_002214368.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 141380 142912 . - . ID=gene-YPIP275_RS05805;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=YPIP275_RS05805;old_locus_tag=YPIP275_4579 NZ_AAOS02000005.1 Protein Homology CDS 141380 142912 . - 0 ID=cds-WP_002209575.1;Parent=gene-YPIP275_RS05805;Dbxref=GenBank:WP_002209575.1;Name=WP_002209575.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105946.1;locus_tag=YPIP275_RS05805;product=histidine ammonia-lyase;protein_id=WP_002209575.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 142909 144600 . - . ID=gene-YPIP275_RS05810;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=YPIP275_RS05810;old_locus_tag=YPIP275_4580 NZ_AAOS02000005.1 Protein Homology CDS 142909 144600 . - 0 ID=cds-WP_002209576.1;Parent=gene-YPIP275_RS05810;Dbxref=GenBank:WP_002209576.1;Name=WP_002209576.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002355586.1;locus_tag=YPIP275_RS05810;product=urocanate hydratase;protein_id=WP_002209576.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 145327 146271 . + . ID=gene-YPIP275_RS05815;Name=YPIP275_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05815;old_locus_tag=YPIP275_4581 NZ_AAOS02000005.1 Protein Homology CDS 145327 146271 . + 0 ID=cds-WP_002209577.1;Parent=gene-YPIP275_RS05815;Dbxref=GenBank:WP_002209577.1;Name=WP_002209577.1;Ontology_term=GO:0019344,GO:0004124,GO:0030170;gbkey=CDS;go_function=cysteine synthase activity|0004124||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209577.1;locus_tag=YPIP275_RS05815;product=cysteine synthase family protein;protein_id=WP_002209577.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 146268 146834 . + . ID=gene-YPIP275_RS05820;Name=YPIP275_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05820;old_locus_tag=YPIP275_4582 NZ_AAOS02000005.1 Protein Homology CDS 146268 146834 . + 0 ID=cds-WP_002209578.1;Parent=gene-YPIP275_RS05820;Dbxref=GenBank:WP_002209578.1;Name=WP_002209578.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209578.1;locus_tag=YPIP275_RS05820;product=phosphoribosyltransferase family protein;protein_id=WP_002209578.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 146917 147846 . + . ID=gene-YPIP275_RS05825;Name=YPIP275_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05825;old_locus_tag=YPIP275_4583 NZ_AAOS02000005.1 Protein Homology CDS 146917 147846 . + 0 ID=cds-WP_002209579.1;Parent=gene-YPIP275_RS05825;Dbxref=GenBank:WP_002209579.1;Name=WP_002209579.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303347.1;locus_tag=YPIP275_RS05825;product=EamA family transporter;protein_id=WP_002209579.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 147848 149092 . + . ID=gene-YPIP275_RS05830;Name=YPIP275_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05830;old_locus_tag=YPIP275_4584 NZ_AAOS02000005.1 Protein Homology CDS 147848 149092 . + 0 ID=cds-WP_002209580.1;Parent=gene-YPIP275_RS05830;Dbxref=GenBank:WP_002209580.1;Name=WP_002209580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209580.1;locus_tag=YPIP275_RS05830;product=ATP-grasp domain-containing protein;protein_id=WP_002209580.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 149615 150568 . + . ID=gene-YPIP275_RS05835;Name=YPIP275_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05835;old_locus_tag=YPIP275_4585 NZ_AAOS02000005.1 Protein Homology CDS 149615 150568 . + 0 ID=cds-WP_002209581.1;Parent=gene-YPIP275_RS05835;Dbxref=GenBank:WP_002209581.1;Name=WP_002209581.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209581.1;locus_tag=YPIP275_RS05835;product=siderophore ABC transporter substrate-binding protein;protein_id=WP_002209581.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 150578 151537 . + . ID=gene-YPIP275_RS05840;Name=YPIP275_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05840;old_locus_tag=YPIP275_4586 NZ_AAOS02000005.1 Protein Homology CDS 150578 151537 . + 0 ID=cds-WP_002209582.1;Parent=gene-YPIP275_RS05840;Dbxref=GenBank:WP_002209582.1;Name=WP_002209582.1;Ontology_term=GO:0006826,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817160.1;locus_tag=YPIP275_RS05840;product=ABC transporter permease;protein_id=WP_002209582.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 151527 152534 . + . ID=gene-YPIP275_RS05845;Name=YPIP275_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05845;old_locus_tag=YPIP275_4587 NZ_AAOS02000005.1 Protein Homology CDS 151527 152534 . + 0 ID=cds-WP_002209583.1;Parent=gene-YPIP275_RS05845;Dbxref=GenBank:WP_002209583.1;Name=WP_002209583.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209583.1;locus_tag=YPIP275_RS05845;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_002209583.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 152531 153289 . + . ID=gene-YPIP275_RS05850;Name=YPIP275_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05850;old_locus_tag=YPIP275_4589 NZ_AAOS02000005.1 Protein Homology CDS 152531 153289 . + 0 ID=cds-WP_002209584.1;Parent=gene-YPIP275_RS05850;Dbxref=GenBank:WP_002209584.1;Name=WP_002209584.1;Ontology_term=GO:0006826,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005157194.1;locus_tag=YPIP275_RS05850;product=iron ABC transporter ATP-binding protein;protein_id=WP_002209584.1;transl_table=11 NZ_AAOS02000005.1 RefSeq pseudogene 153301 153850 . - . ID=gene-YPIP275_RS05855;Name=rhuM;end_range=153850,.;gbkey=Gene;gene=rhuM;gene_biotype=pseudogene;locus_tag=YPIP275_RS05855;old_locus_tag=YPIP275_4588;partial=true;pseudo=true;start_range=.,153301 NZ_AAOS02000005.1 Protein Homology CDS 153301 153850 . - 0 ID=cds-YPIP275_RS05855;Parent=gene-YPIP275_RS05855;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=153850,.;gbkey=CDS;gene=rhuM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462654.1;locus_tag=YPIP275_RS05855;partial=true;product=RhuM family protein;pseudo=true;start_range=.,153301;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 154022 154207 . - . ID=gene-YPIP275_RS05860;Name=YPIP275_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05860;old_locus_tag=YPIP275_4590 NZ_AAOS02000005.1 Protein Homology CDS 154022 154207 . - 0 ID=cds-WP_002214362.1;Parent=gene-YPIP275_RS05860;Dbxref=GenBank:WP_002214362.1;Name=WP_002214362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214362.1;locus_tag=YPIP275_RS05860;product=hypothetical protein;protein_id=WP_002214362.1;transl_table=11 NZ_AAOS02000005.1 RefSeq pseudogene 154883 155116 . + . ID=gene-YPIP275_RS26970;Name=YPIP275_RS26970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS26970;partial=true;pseudo=true;start_range=.,154883 NZ_AAOS02000005.1 Protein Homology CDS 154883 155116 . + 0 ID=cds-YPIP275_RS26970;Parent=gene-YPIP275_RS26970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214785.1;locus_tag=YPIP275_RS26970;partial=true;product=type II toxin-antitoxin system RelE family toxin;pseudo=true;start_range=.,154883;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 155179 155541 . + . ID=gene-YPIP275_RS05865;Name=YPIP275_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05865;old_locus_tag=YPIP275_4591 NZ_AAOS02000005.1 Protein Homology CDS 155179 155541 . + 0 ID=cds-WP_002209585.1;Parent=gene-YPIP275_RS05865;Dbxref=GenBank:WP_002209585.1;Name=WP_002209585.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192920.1;locus_tag=YPIP275_RS05865;product=helix-turn-helix domain-containing protein;protein_id=WP_002209585.1;transl_table=11 NZ_AAOS02000005.1 RefSeq pseudogene 155635 156512 . + . ID=gene-YPIP275_RS26975;Name=YPIP275_RS26975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS26975;old_locus_tag=YPIP275_4592;partial=true;pseudo=true;start_range=.,155635 NZ_AAOS02000005.1 Protein Homology CDS 155635 156512 . + 0 ID=cds-YPIP275_RS26975;Parent=gene-YPIP275_RS26975;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491235.1;locus_tag=YPIP275_RS26975;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,155635;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 156686 156931 . + . ID=gene-YPIP275_RS05880;Name=YPIP275_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05880 NZ_AAOS02000005.1 Protein Homology CDS 156686 156931 . + 0 ID=cds-WP_002214358.1;Parent=gene-YPIP275_RS05880;Dbxref=GenBank:WP_002214358.1;Name=WP_002214358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005161896.1;locus_tag=YPIP275_RS05880;product=ogr/Delta-like zinc finger family protein;protein_id=WP_002214358.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 157199 158578 . - . ID=gene-YPIP275_RS05885;Name=YPIP275_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05885;old_locus_tag=YPIP275_4593 NZ_AAOS02000005.1 Protein Homology CDS 157199 158578 . - 0 ID=cds-WP_002209586.1;Parent=gene-YPIP275_RS05885;Dbxref=GenBank:WP_002209586.1;Name=WP_002209586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209586.1;locus_tag=YPIP275_RS05885;product=HEPN domain-containing protein;protein_id=WP_002209586.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 158565 159758 . - . ID=gene-YPIP275_RS05890;Name=YPIP275_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05890;old_locus_tag=YPIP275_4594 NZ_AAOS02000005.1 Protein Homology CDS 158565 159758 . - 0 ID=cds-WP_002209587.1;Parent=gene-YPIP275_RS05890;Dbxref=GenBank:WP_002209587.1;Name=WP_002209587.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683793.1;locus_tag=YPIP275_RS05890;product=tyrosine-type recombinase/integrase;protein_id=WP_002209587.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 159920 160014 . - . ID=gene-YPIP275_RS28475;Name=YPIP275_RS28475;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS28475;old_locus_tag=YPIP275_4595 NZ_AAOS02000005.1 tRNAscan-SE tRNA 159920 160014 . - . ID=rna-YPIP275_RS28475;Parent=gene-YPIP275_RS28475;anticodon=(pos:complement(159978..159980));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS28475;product=tRNA-Sec NZ_AAOS02000005.1 tRNAscan-SE exon 159920 160014 . - . ID=exon-YPIP275_RS28475-1;Parent=rna-YPIP275_RS28475;anticodon=(pos:complement(159978..159980));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS28475;product=tRNA-Sec NZ_AAOS02000005.1 RefSeq gene 160144 161337 . - . ID=gene-YPIP275_RS05895;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=YPIP275_RS05895;old_locus_tag=YPIP275_4596 NZ_AAOS02000005.1 Protein Homology CDS 160144 161337 . - 0 ID=cds-WP_002209588.1;Parent=gene-YPIP275_RS05895;Dbxref=GenBank:WP_002209588.1;Name=WP_002209588.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081419.1;locus_tag=YPIP275_RS05895;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_002209588.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 161427 162611 . - . ID=gene-YPIP275_RS05900;Name=xylH;gbkey=Gene;gene=xylH;gene_biotype=protein_coding;locus_tag=YPIP275_RS05900;old_locus_tag=YPIP275_4597 NZ_AAOS02000005.1 Protein Homology CDS 161427 162611 . - 0 ID=cds-WP_002209589.1;Parent=gene-YPIP275_RS05900;Dbxref=GenBank:WP_002209589.1;Name=WP_002209589.1;gbkey=CDS;gene=xylH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209589.1;locus_tag=YPIP275_RS05900;product=xylose ABC transporter permease XylH;protein_id=WP_002209589.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 162598 164130 . - . ID=gene-YPIP275_RS05905;Name=YPIP275_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05905;old_locus_tag=YPIP275_4598 NZ_AAOS02000005.1 Protein Homology CDS 162598 164130 . - 0 ID=cds-WP_002209590.1;Parent=gene-YPIP275_RS05905;Dbxref=GenBank:WP_002209590.1;Name=WP_002209590.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105953.1;locus_tag=YPIP275_RS05905;product=xylose ABC transporter ATP-binding protein;protein_id=WP_002209590.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 164338 165333 . - . ID=gene-YPIP275_RS05910;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=YPIP275_RS05910;old_locus_tag=YPIP275_4599 NZ_AAOS02000005.1 Protein Homology CDS 164338 165333 . - 0 ID=cds-WP_002209591.1;Parent=gene-YPIP275_RS05910;Dbxref=GenBank:WP_002209591.1;Name=WP_002209591.1;Ontology_term=GO:0015753;gbkey=CDS;gene=xylF;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391154.1;locus_tag=YPIP275_RS05910;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_002209591.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 165796 167115 . + . ID=gene-YPIP275_RS05915;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05915;old_locus_tag=YPIP275_4600 NZ_AAOS02000005.1 Protein Homology CDS 165796 167115 . + 0 ID=cds-WP_002209593.1;Parent=gene-YPIP275_RS05915;Dbxref=GenBank:WP_002209593.1;Name=WP_002209593.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322931.1;locus_tag=YPIP275_RS05915;product=xylose isomerase;protein_id=WP_002209593.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 167239 168693 . + . ID=gene-YPIP275_RS05920;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=YPIP275_RS05920;old_locus_tag=YPIP275_4601 NZ_AAOS02000005.1 Protein Homology CDS 167239 168693 . + 0 ID=cds-WP_002209594.1;Parent=gene-YPIP275_RS05920;Dbxref=GenBank:WP_002209594.1;Name=WP_002209594.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303337.1;locus_tag=YPIP275_RS05920;product=xylulokinase;protein_id=WP_002209594.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 168811 169797 . - . ID=gene-YPIP275_RS05925;Name=YPIP275_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05925;old_locus_tag=YPIP275_4602 NZ_AAOS02000005.1 Protein Homology CDS 168811 169797 . - 0 ID=cds-WP_002209595.1;Parent=gene-YPIP275_RS05925;Dbxref=GenBank:WP_002209595.1;Name=WP_002209595.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303336.1;locus_tag=YPIP275_RS05925;product=fimbrial protein;protein_id=WP_002209595.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 169836 170603 . - . ID=gene-YPIP275_RS05930;Name=YPIP275_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05930;old_locus_tag=YPIP275_4603 NZ_AAOS02000005.1 Protein Homology CDS 169836 170603 . - 0 ID=cds-WP_002209596.1;Parent=gene-YPIP275_RS05930;Dbxref=GenBank:WP_002209596.1;Name=WP_002209596.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209596.1;locus_tag=YPIP275_RS05930;product=fimbrial biogenesis chaperone;protein_id=WP_002209596.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 170696 171331 . - . ID=gene-YPIP275_RS28480;Name=YPIP275_RS28480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28480;old_locus_tag=YPIP275_4604 NZ_AAOS02000005.1 Protein Homology CDS 170696 171331 . - 0 ID=cds-WP_002215756.1;Parent=gene-YPIP275_RS28480;Dbxref=GenBank:WP_002215756.1;Name=WP_002215756.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF012786.7;locus_tag=YPIP275_RS28480;product=fimbria/pilus outer membrane usher protein;protein_id=WP_002215756.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 171357 173108 . - . ID=gene-YPIP275_RS05940;Name=YPIP275_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05940;old_locus_tag=YPIP275_4605 NZ_AAOS02000005.1 Protein Homology CDS 171357 173108 . - 0 ID=cds-WP_002384622.1;Parent=gene-YPIP275_RS05940;Dbxref=GenBank:WP_002384622.1;Name=WP_002384622.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF012786.7;locus_tag=YPIP275_RS05940;product=fimbria/pilus outer membrane usher protein;protein_id=WP_002384622.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 173262 173819 . - . ID=gene-YPIP275_RS05945;Name=YPIP275_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05945;old_locus_tag=YPIP275_4606 NZ_AAOS02000005.1 Protein Homology CDS 173262 173819 . - 0 ID=cds-WP_002209597.1;Parent=gene-YPIP275_RS05945;Dbxref=GenBank:WP_002209597.1;Name=WP_002209597.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209597.1;locus_tag=YPIP275_RS05945;product=fimbrial protein;protein_id=WP_002209597.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 174701 175693 . - . ID=gene-YPIP275_RS05950;Name=YPIP275_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05950;old_locus_tag=YPIP275_4608 NZ_AAOS02000005.1 Protein Homology CDS 174701 175693 . - 0 ID=cds-WP_002209600.1;Parent=gene-YPIP275_RS05950;Dbxref=GenBank:WP_002209600.1;Name=WP_002209600.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004874981.1;locus_tag=YPIP275_RS05950;product=acyltransferase;protein_id=WP_002209600.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 175690 175890 . - . ID=gene-YPIP275_RS05955;Name=YPIP275_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05955;old_locus_tag=YPIP275_4609 NZ_AAOS02000005.1 Protein Homology CDS 175690 175890 . - 0 ID=cds-WP_002209601.1;Parent=gene-YPIP275_RS05955;Dbxref=GenBank:WP_002209601.1;Name=WP_002209601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209601.1;locus_tag=YPIP275_RS05955;product=hypothetical protein;protein_id=WP_002209601.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 176056 177410 . + . ID=gene-YPIP275_RS28485;Name=YPIP275_RS28485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28485 NZ_AAOS02000005.1 Protein Homology CDS 176056 176506 . + 0 ID=cds-WP_100067904.1-3;Parent=gene-YPIP275_RS28485;Dbxref=GenBank:WP_100067904.1;Name=WP_100067904.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558220.1;locus_tag=YPIP275_RS28485;product=IS3-like element IS1661 family transposase;protein_id=WP_100067904.1;transl_table=11 NZ_AAOS02000005.1 Protein Homology CDS 176506 177410 . + 2 ID=cds-WP_100067904.1-3;Parent=gene-YPIP275_RS28485;Dbxref=GenBank:WP_100067904.1;Name=WP_100067904.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558220.1;locus_tag=YPIP275_RS28485;product=IS3-like element IS1661 family transposase;protein_id=WP_100067904.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 177883 179112 . + . ID=gene-YPIP275_RS05970;Name=YPIP275_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05970;old_locus_tag=YPIP275_4612 NZ_AAOS02000005.1 Protein Homology CDS 177883 179112 . + 0 ID=cds-WP_002215753.1;Parent=gene-YPIP275_RS05970;Dbxref=GenBank:WP_002215753.1;Name=WP_002215753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303331.1;locus_tag=YPIP275_RS05970;product=MFS transporter;protein_id=WP_002215753.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 179261 179464 . - . ID=gene-YPIP275_RS05975;Name=YPIP275_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05975;old_locus_tag=YPIP275_4613 NZ_AAOS02000005.1 Protein Homology CDS 179261 179464 . - 0 ID=cds-WP_002209605.1;Parent=gene-YPIP275_RS05975;Dbxref=GenBank:WP_002209605.1;Name=WP_002209605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209605.1;locus_tag=YPIP275_RS05975;product=hypothetical protein;protein_id=WP_002209605.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 179585 179743 . + . ID=gene-YPIP275_RS05980;Name=YPIP275_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05980;old_locus_tag=YPIP275_4614 NZ_AAOS02000005.1 Protein Homology CDS 179585 179743 . + 0 ID=cds-WP_002215752.1;Parent=gene-YPIP275_RS05980;Dbxref=GenBank:WP_002215752.1;Name=WP_002215752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215752.1;locus_tag=YPIP275_RS05980;product=hypothetical protein;protein_id=WP_002215752.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 179822 180403 . + . ID=gene-YPIP275_RS05985;Name=YPIP275_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05985;old_locus_tag=YPIP275_4615 NZ_AAOS02000005.1 Protein Homology CDS 179822 180403 . + 0 ID=cds-WP_002215751.1;Parent=gene-YPIP275_RS05985;Dbxref=GenBank:WP_002215751.1;Name=WP_002215751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193347.1;locus_tag=YPIP275_RS05985;product=DUF4225 domain-containing protein;protein_id=WP_002215751.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 180417 180749 . - . ID=gene-YPIP275_RS05990;Name=YPIP275_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05990 NZ_AAOS02000005.1 Protein Homology CDS 180417 180749 . - 0 ID=cds-WP_002215750.1;Parent=gene-YPIP275_RS05990;Dbxref=GenBank:WP_002215750.1;Name=WP_002215750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193346.1;locus_tag=YPIP275_RS05990;product=hypothetical protein;protein_id=WP_002215750.1;transl_table=11 NZ_AAOS02000005.1 RefSeq pseudogene 181017 181418 . + . ID=gene-YPIP275_RS05995;Name=YPIP275_RS05995;end_range=181418,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS05995;old_locus_tag=YPIP275_4616;partial=true;pseudo=true;start_range=.,181017 NZ_AAOS02000005.1 Protein Homology CDS 181017 181418 . + 0 ID=cds-YPIP275_RS05995;Parent=gene-YPIP275_RS05995;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=181418,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611787.1;locus_tag=YPIP275_RS05995;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,181017;transl_table=11 NZ_AAOS02000005.1 RefSeq pseudogene 181509 183462 . - . ID=gene-YPIP275_RS06000;Name=selB;gbkey=Gene;gene=selB;gene_biotype=pseudogene;locus_tag=YPIP275_RS06000;old_locus_tag=YPIP275_4617;pseudo=true NZ_AAOS02000005.1 Protein Homology CDS 181509 183462 . - 0 ID=cds-YPIP275_RS06000;Parent=gene-YPIP275_RS06000;Note=frameshifted;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223796.1;locus_tag=YPIP275_RS06000;product=selenocysteine-specific translation elongation factor;pseudo=true;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 183459 184847 . - . ID=gene-YPIP275_RS06010;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06010;old_locus_tag=YPIP275_4618 NZ_AAOS02000005.1 Protein Homology CDS 183459 184847 . - 0 ID=cds-WP_002209608.1;Parent=gene-YPIP275_RS06010;Dbxref=GenBank:WP_002209608.1;Name=WP_002209608.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209608.1;locus_tag=YPIP275_RS06010;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_002209608.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 185031 185960 . - . ID=gene-YPIP275_RS06015;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=YPIP275_RS06015;old_locus_tag=YPIP275_4619 NZ_AAOS02000005.1 Protein Homology CDS 185031 185960 . - 0 ID=cds-WP_002209609.1;Parent=gene-YPIP275_RS06015;Dbxref=GenBank:WP_002209609.1;Name=WP_002209609.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005271637.1;locus_tag=YPIP275_RS06015;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_002209609.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 185960 186634 . - . ID=gene-YPIP275_RS06020;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=YPIP275_RS06020;old_locus_tag=YPIP275_4620 NZ_AAOS02000005.1 Protein Homology CDS 185960 186634 . - 0 ID=cds-WP_002209610.1;Parent=gene-YPIP275_RS06020;Dbxref=GenBank:WP_002209610.1;Name=WP_002209610.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193343.1;locus_tag=YPIP275_RS06020;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_002209610.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 186631 187602 . - . ID=gene-YPIP275_RS06025;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=YPIP275_RS06025;old_locus_tag=YPIP275_4621 NZ_AAOS02000005.1 Protein Homology CDS 186631 187602 . - 0 ID=cds-WP_002209611.1;Parent=gene-YPIP275_RS06025;Dbxref=GenBank:WP_002209611.1;Name=WP_002209611.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209611.1;locus_tag=YPIP275_RS06025;product=formate dehydrogenase subunit beta;protein_id=WP_002209611.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 187615 190662 . - . ID=gene-YPIP275_RS06030;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=YPIP275_RS06030;old_locus_tag=YPIP275_4622 NZ_AAOS02000005.1 Protein Homology CDS 187615 190662 . - 0 ID=cds-WP_002228725.1;Parent=gene-YPIP275_RS06030;Dbxref=GenBank:WP_002228725.1;Name=WP_002228725.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418330.1;locus_tag=YPIP275_RS06030;product=formate dehydrogenase-N subunit alpha;protein_id=WP_002228725.1;transl_except=(pos:complement(190075..190077)%2Caa:Sec);transl_table=11 NZ_AAOS02000005.1 RefSeq gene 190859 191683 . + . ID=gene-YPIP275_RS06040;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=YPIP275_RS06040;old_locus_tag=YPIP275_4624 NZ_AAOS02000005.1 Protein Homology CDS 190859 191683 . + 0 ID=cds-WP_002209612.1;Parent=gene-YPIP275_RS06040;Dbxref=GenBank:WP_002209612.1;Name=WP_002209612.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193341.1;locus_tag=YPIP275_RS06040;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_002209612.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 192119 192742 . + . ID=gene-YPIP275_RS06045;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06045;old_locus_tag=YPIP275_4626 NZ_AAOS02000005.1 Protein Homology CDS 192119 192742 . + 0 ID=cds-WP_002209614.1;Parent=gene-YPIP275_RS06045;Dbxref=GenBank:WP_002209614.1;Name=WP_002209614.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650637.1;locus_tag=YPIP275_RS06045;product=superoxide dismutase [Mn];protein_id=WP_002209614.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 193086 195035 . + . ID=gene-YPIP275_RS06050;Name=YPIP275_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06050;old_locus_tag=YPIP275_4627 NZ_AAOS02000005.1 Protein Homology CDS 193086 195035 . + 0 ID=cds-WP_002209615.1;Parent=gene-YPIP275_RS06050;Dbxref=GenBank:WP_002209615.1;Name=WP_002209615.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193340.1;locus_tag=YPIP275_RS06050;product=methyl-accepting chemotaxis protein;protein_id=WP_002209615.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 195225 195557 . + . ID=gene-YPIP275_RS06055;Name=YPIP275_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06055;old_locus_tag=YPIP275_4628 NZ_AAOS02000005.1 Protein Homology CDS 195225 195557 . + 0 ID=cds-WP_002217114.1;Parent=gene-YPIP275_RS06055;Dbxref=GenBank:WP_002217114.1;Name=WP_002217114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217114.1;locus_tag=YPIP275_RS06055;product=hypothetical protein;protein_id=WP_002217114.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 196089 196565 . + . ID=gene-YPIP275_RS06060;Name=YPIP275_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06060;old_locus_tag=YPIP275_4629 NZ_AAOS02000005.1 Protein Homology CDS 196089 196565 . + 0 ID=cds-WP_002209617.1;Parent=gene-YPIP275_RS06060;Dbxref=GenBank:WP_002209617.1;Name=WP_002209617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209617.1;locus_tag=YPIP275_RS06060;product=DM13 domain-containing protein;protein_id=WP_002209617.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 196734 197090 . - . ID=gene-YPIP275_RS06065;Name=YPIP275_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06065;old_locus_tag=YPIP275_4630 NZ_AAOS02000005.1 Protein Homology CDS 196734 197090 . - 0 ID=cds-WP_002209618.1;Parent=gene-YPIP275_RS06065;Dbxref=GenBank:WP_002209618.1;Name=WP_002209618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209618.1;locus_tag=YPIP275_RS06065;product=YibL family ribosome-associated protein;protein_id=WP_002209618.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 197339 197893 . - . ID=gene-YPIP275_RS06070;Name=YPIP275_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06070;old_locus_tag=YPIP275_4631 NZ_AAOS02000005.1 Protein Homology CDS 197339 197893 . - 0 ID=cds-WP_002209619.1;Parent=gene-YPIP275_RS06070;Dbxref=GenBank:WP_002209619.1;Name=WP_002209619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209619.1;locus_tag=YPIP275_RS06070;product=MltR family transcriptional regulator;protein_id=WP_002209619.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 198100 199263 . - . ID=gene-YPIP275_RS06075;Name=YPIP275_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06075;old_locus_tag=YPIP275_4632 NZ_AAOS02000005.1 Protein Homology CDS 198100 199263 . - 0 ID=cds-WP_002209620.1;Parent=gene-YPIP275_RS06075;Dbxref=GenBank:WP_002209620.1;Name=WP_002209620.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217108.1;locus_tag=YPIP275_RS06075;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_002209620.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 199400 201331 . - . ID=gene-YPIP275_RS06080;Name=YPIP275_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06080;old_locus_tag=YPIP275_4633 NZ_AAOS02000005.1 Protein Homology CDS 199400 201331 . - 0 ID=cds-WP_002209621.1;Parent=gene-YPIP275_RS06080;Dbxref=GenBank:WP_002209621.1;Name=WP_002209621.1;Ontology_term=GO:0009401,GO:0015797,GO:0016310,GO:0016301,GO:0022872,GO:0090565,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA,protein-N(PI)-phosphohistidine-mannitol phosphotransferase system transmembrane transporter activity|0022872||IEA,protein-phosphocysteine-mannitol phosphotransferase system transporter activity|0090565||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,mannitol transmembrane transport|0015797||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209621.1;locus_tag=YPIP275_RS06080;product=PTS mannitol transporter subunit IICBA;protein_id=WP_002209621.1;transl_table=11 NZ_AAOS02000005.1 RefSeq pseudogene 201735 201848 . - . ID=gene-YPIP275_RS28490;Name=YPIP275_RS28490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28490;pseudo=true NZ_AAOS02000005.1 Protein Homology CDS 201735 201848 . - 0 ID=cds-YPIP275_RS28490;Parent=gene-YPIP275_RS28490;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378759.1;locus_tag=YPIP275_RS28490;product=gluconate 5-dehydrogenase;pseudo=true;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 201981 202700 . - . ID=gene-YPIP275_RS06085;Name=YPIP275_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06085;old_locus_tag=YPIP275_4634 NZ_AAOS02000005.1 Protein Homology CDS 201981 202700 . - 0 ID=cds-WP_002209622.1;Parent=gene-YPIP275_RS06085;Dbxref=GenBank:WP_002209622.1;Name=WP_002209622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105968.1;locus_tag=YPIP275_RS06085;product=DUF3053 domain-containing protein;protein_id=WP_002209622.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 203173 205242 . - . ID=gene-YPIP275_RS06090;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=YPIP275_RS06090;old_locus_tag=YPIP275_4635 NZ_AAOS02000005.1 Protein Homology CDS 203173 205242 . - 0 ID=cds-WP_002209623.1;Parent=gene-YPIP275_RS06090;Dbxref=GenBank:WP_002209623.1;Name=WP_002209623.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=YPIP275_RS06090;product=glycine--tRNA ligase subunit beta;protein_id=WP_002209623.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 205252 206166 . - . ID=gene-YPIP275_RS06095;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS06095;old_locus_tag=YPIP275_4636 NZ_AAOS02000005.1 Protein Homology CDS 205252 206166 . - 0 ID=cds-WP_002209624.1;Parent=gene-YPIP275_RS06095;Dbxref=GenBank:WP_002209624.1;Name=WP_002209624.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175094.1;locus_tag=YPIP275_RS06095;product=glycine--tRNA ligase subunit alpha;protein_id=WP_002209624.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 206494 207066 . + . ID=gene-YPIP275_RS06100;Name=YPIP275_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06100;old_locus_tag=YPIP275_4638 NZ_AAOS02000005.1 Protein Homology CDS 206494 207066 . + 0 ID=cds-WP_002209626.1;Parent=gene-YPIP275_RS06100;Dbxref=GenBank:WP_002209626.1;Name=WP_002209626.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084177.1;locus_tag=YPIP275_RS06100;product=DNA-3-methyladenine glycosylase I;protein_id=WP_002209626.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 207063 207518 . + . ID=gene-YPIP275_RS06105;Name=YPIP275_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06105;old_locus_tag=YPIP275_4639 NZ_AAOS02000005.1 Protein Homology CDS 207063 207518 . + 0 ID=cds-WP_002209627.1;Parent=gene-YPIP275_RS06105;Dbxref=GenBank:WP_002209627.1;Name=WP_002209627.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209627.1;locus_tag=YPIP275_RS06105;product=N-acetyltransferase;protein_id=WP_002209627.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 207876 208535 . + . ID=gene-YPIP275_RS06110;Name=YPIP275_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06110;old_locus_tag=YPIP275_4640 NZ_AAOS02000005.1 Protein Homology CDS 207876 208535 . + 0 ID=cds-WP_002209628.1;Parent=gene-YPIP275_RS06110;Dbxref=GenBank:WP_002209628.1;Name=WP_002209628.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081450.1;locus_tag=YPIP275_RS06110;product=OmpA family lipoprotein;protein_id=WP_002209628.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 208666 209310 . - . ID=gene-YPIP275_RS06115;Name=YPIP275_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06115;old_locus_tag=YPIP275_4641 NZ_AAOS02000005.1 Protein Homology CDS 208666 209310 . - 0 ID=cds-WP_002209629.1;Parent=gene-YPIP275_RS06115;Dbxref=GenBank:WP_002209629.1;Name=WP_002209629.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209629.1;locus_tag=YPIP275_RS06115;product=helix-turn-helix transcriptional regulator;protein_id=WP_002209629.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 209829 210809 . + . ID=gene-YPIP275_RS06120;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=YPIP275_RS06120;old_locus_tag=YPIP275_4642 NZ_AAOS02000005.1 Protein Homology CDS 209829 210809 . + 0 ID=cds-WP_002209630.1;Parent=gene-YPIP275_RS06120;Dbxref=GenBank:WP_002209630.1;Name=WP_002209630.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303319.1;locus_tag=YPIP275_RS06120;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_002209630.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 211098 213161 . + . ID=gene-YPIP275_RS06125;Name=YPIP275_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06125;old_locus_tag=YPIP275_4643 NZ_AAOS02000005.1 Protein Homology CDS 211098 213161 . + 0 ID=cds-WP_002209631.1;Parent=gene-YPIP275_RS06125;Dbxref=GenBank:WP_002209631.1;Name=WP_002209631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105973.1;locus_tag=YPIP275_RS06125;product=alpha-amylase;protein_id=WP_002209631.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 213576 214019 . + . ID=gene-YPIP275_RS06130;Name=YPIP275_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06130;old_locus_tag=YPIP275_4644 NZ_AAOS02000005.1 Protein Homology CDS 213576 214019 . + 0 ID=cds-WP_002209632.1;Parent=gene-YPIP275_RS06130;Dbxref=GenBank:WP_002209632.1;Name=WP_002209632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303317.1;locus_tag=YPIP275_RS06130;product=hypothetical protein;protein_id=WP_002209632.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 214474 215739 . + . ID=gene-YPIP275_RS06135;Name=YPIP275_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06135;old_locus_tag=YPIP275_4645 NZ_AAOS02000005.1 Protein Homology CDS 214474 215739 . + 0 ID=cds-WP_002228155.1;Parent=gene-YPIP275_RS06135;Dbxref=GenBank:WP_002228155.1;Name=WP_002228155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228155.1;locus_tag=YPIP275_RS06135;product=valine--pyruvate transaminase;protein_id=WP_002228155.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 215852 217510 . - . ID=gene-YPIP275_RS06140;Name=YPIP275_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06140;old_locus_tag=YPIP275_4646 NZ_AAOS02000005.1 Protein Homology CDS 215852 217510 . - 0 ID=cds-WP_002209634.1;Parent=gene-YPIP275_RS06140;Dbxref=GenBank:WP_002209634.1;Name=WP_002209634.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005186793.1;locus_tag=YPIP275_RS06140;product=putative transporter;protein_id=WP_002209634.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 217883 218347 . - . ID=gene-YPIP275_RS06145;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=YPIP275_RS06145;old_locus_tag=YPIP275_4647 NZ_AAOS02000005.1 Protein Homology CDS 217883 218347 . - 0 ID=cds-WP_002209635.1;Parent=gene-YPIP275_RS06145;Dbxref=GenBank:WP_002209635.1;Name=WP_002209635.1;Ontology_term=GO:0006950;gbkey=CDS;gene=ibpB;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209635.1;locus_tag=YPIP275_RS06145;product=small heat shock chaperone IbpB;protein_id=WP_002209635.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 218628 219041 . - . ID=gene-YPIP275_RS06150;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06150;old_locus_tag=YPIP275_4648 NZ_AAOS02000005.1 Protein Homology CDS 218628 219041 . - 0 ID=cds-WP_002209636.1;Parent=gene-YPIP275_RS06150;Dbxref=GenBank:WP_002209636.1;Name=WP_002209636.1;Ontology_term=GO:0006950;gbkey=CDS;gene=ibpA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209636.1;locus_tag=YPIP275_RS06150;product=small heat shock chaperone IbpA;protein_id=WP_002209636.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 219409 219747 . + . ID=gene-YPIP275_RS06155;Name=YPIP275_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06155;old_locus_tag=YPIP275_4649 NZ_AAOS02000005.1 Protein Homology CDS 219409 219747 . + 0 ID=cds-WP_002209637.1;Parent=gene-YPIP275_RS06155;Dbxref=GenBank:WP_002209637.1;Name=WP_002209637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209637.1;locus_tag=YPIP275_RS06155;product=YceK/YidQ family lipoprotein;protein_id=WP_002209637.1;transl_table=11 NZ_AAOS02000005.1 RefSeq pseudogene 219787 220402 . - . ID=gene-YPIP275_RS28495;Name=YPIP275_RS28495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28495;old_locus_tag=YPIP275_4650;pseudo=true NZ_AAOS02000005.1 Protein Homology CDS 219787 220402 . - 0 ID=cds-YPIP275_RS28495;Parent=gene-YPIP275_RS28495;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081457.1;locus_tag=YPIP275_RS28495;product=hypothetical protein;pseudo=true;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 220610 221572 . + . ID=gene-YPIP275_RS06170;Name=YPIP275_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06170;old_locus_tag=YPIP275_4651 NZ_AAOS02000005.1 Protein Homology CDS 220610 221572 . + 0 ID=cds-WP_002209638.1;Parent=gene-YPIP275_RS06170;Dbxref=GenBank:WP_002209638.1;Name=WP_002209638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209638.1;locus_tag=YPIP275_RS06170;product=threonine/serine dehydratase;protein_id=WP_002209638.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 221566 222519 . + . ID=gene-YPIP275_RS06175;Name=YPIP275_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS06175;old_locus_tag=YPIP275_4652 NZ_AAOS02000005.1 Protein Homology CDS 221566 222519 . + 0 ID=cds-WP_002209639.1;Parent=gene-YPIP275_RS06175;Dbxref=GenBank:WP_002209639.1;Name=WP_002209639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193327.1;locus_tag=YPIP275_RS06175;product=ornithine cyclodeaminase family protein;protein_id=WP_002209639.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 222726 224080 . + . ID=gene-YPIP275_RS28500;Name=YPIP275_RS28500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28500 NZ_AAOS02000005.1 Protein Homology CDS 222726 223176 . + 0 ID=cds-WP_100067904.1-4;Parent=gene-YPIP275_RS28500;Dbxref=GenBank:WP_100067904.1;Name=WP_100067904.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558220.1;locus_tag=YPIP275_RS28500;product=IS3-like element IS1661 family transposase;protein_id=WP_100067904.1;transl_table=11 NZ_AAOS02000005.1 Protein Homology CDS 223176 224080 . + 2 ID=cds-WP_100067904.1-4;Parent=gene-YPIP275_RS28500;Dbxref=GenBank:WP_100067904.1;Name=WP_100067904.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558220.1;locus_tag=YPIP275_RS28500;product=IS3-like element IS1661 family transposase;protein_id=WP_100067904.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 224471 225280 . - . ID=gene-YPIP275_RS06190;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06190;old_locus_tag=YPIP275_4655 NZ_AAOS02000005.1 Protein Homology CDS 224471 225280 . - 0 ID=cds-WP_002209641.1;Parent=gene-YPIP275_RS06190;Dbxref=GenBank:WP_002209641.1;Name=WP_002209641.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209641.1;locus_tag=YPIP275_RS06190;product=sugar-phosphatase;protein_id=WP_002209641.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 225496 227910 . - . ID=gene-YPIP275_RS06195;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=YPIP275_RS06195;old_locus_tag=YPIP275_4656 NZ_AAOS02000005.1 Protein Homology CDS 225496 227910 . - 0 ID=cds-WP_002209642.1;Parent=gene-YPIP275_RS06195;Dbxref=GenBank:WP_002209642.1;Name=WP_002209642.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=YPIP275_RS06195;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_002209642.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 227930 229015 . - . ID=gene-YPIP275_RS06200;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=YPIP275_RS06200;old_locus_tag=YPIP275_4657 NZ_AAOS02000005.1 Protein Homology CDS 227930 229015 . - 0 ID=cds-WP_002209643.1;Parent=gene-YPIP275_RS06200;Dbxref=GenBank:WP_002209643.1;Name=WP_002209643.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875688.1;locus_tag=YPIP275_RS06200;product=DNA replication/repair protein RecF;protein_id=WP_002209643.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 229188 230288 . - . ID=gene-YPIP275_RS06210;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=YPIP275_RS06210;old_locus_tag=YPIP275_4659 NZ_AAOS02000005.1 Protein Homology CDS 229188 230288 . - 0 ID=cds-WP_002209645.1;Parent=gene-YPIP275_RS06210;Dbxref=GenBank:WP_002209645.1;Name=WP_002209645.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=YPIP275_RS06210;product=DNA polymerase III subunit beta;protein_id=WP_002209645.1;transl_table=11 NZ_AAOS02000005.1 RefSeq gene 230293 231681 . - . ID=gene-YPIP275_RS06215;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS06215;old_locus_tag=YPIP275_4660 NZ_AAOS02000005.1 Protein Homology CDS 230293 231681 . - 0 ID=cds-WP_002220732.1;Parent=gene-YPIP275_RS06215;Dbxref=GenBank:WP_002220732.1;Name=WP_002220732.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004161180.1;locus_tag=YPIP275_RS06215;product=chromosomal replication initiator protein DnaA;protein_id=WP_002220732.1;transl_table=11 ##sequence-region NZ_AAOS02000004.1 1 255646 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000004.1 RefSeq region 1 255646 . + . ID=NZ_AAOS02000004.1:1..255646;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000004.1 RefSeq gene 1 405 . + . ID=gene-YPIP275_RS04035;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=YPIP275_RS04035;old_locus_tag=YPIP275_4020;partial=true;start_range=.,1 NZ_AAOS02000004.1 Protein Homology CDS 1 405 . + 0 ID=cds-WP_002209252.1;Parent=gene-YPIP275_RS04035;Dbxref=GenBank:WP_002209252.1;Name=WP_002209252.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=YPIP275_RS04035;partial=true;product=ribosome maturation factor RimP;protein_id=WP_002209252.1;start_range=.,1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 427 1914 . + . ID=gene-YPIP275_RS04040;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=YPIP275_RS04040;old_locus_tag=YPIP275_4021 NZ_AAOS02000004.1 Protein Homology CDS 427 1914 . + 0 ID=cds-WP_002209253.1;Parent=gene-YPIP275_RS04040;Dbxref=GenBank:WP_002209253.1;Name=WP_002209253.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=YPIP275_RS04040;product=transcription termination factor NusA;protein_id=WP_002209253.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 1939 4593 . + . ID=gene-YPIP275_RS04045;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=YPIP275_RS04045;old_locus_tag=YPIP275_4022 NZ_AAOS02000004.1 Protein Homology CDS 1939 4593 . + 0 ID=cds-WP_002209254.1;Parent=gene-YPIP275_RS04045;Dbxref=GenBank:WP_002209254.1;Name=WP_002209254.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223151.1;locus_tag=YPIP275_RS04045;product=translation initiation factor IF-2;protein_id=WP_002209254.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 4659 5069 . + . ID=gene-YPIP275_RS04050;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=YPIP275_RS04050;old_locus_tag=YPIP275_4023 NZ_AAOS02000004.1 Protein Homology CDS 4659 5069 . + 0 ID=cds-WP_002209255.1;Parent=gene-YPIP275_RS04050;Dbxref=GenBank:WP_002209255.1;Name=WP_002209255.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175393.1;locus_tag=YPIP275_RS04050;product=30S ribosome-binding factor RbfA;protein_id=WP_002209255.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 5069 6043 . + . ID=gene-YPIP275_RS04055;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=YPIP275_RS04055;old_locus_tag=YPIP275_4024 NZ_AAOS02000004.1 Protein Homology CDS 5069 6043 . + 0 ID=cds-WP_002209256.1;Parent=gene-YPIP275_RS04055;Dbxref=GenBank:WP_002209256.1;Name=WP_002209256.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209256.1;locus_tag=YPIP275_RS04055;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_002209256.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 6165 6434 . + . ID=gene-YPIP275_RS04060;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=YPIP275_RS04060;old_locus_tag=YPIP275_4025 NZ_AAOS02000004.1 Protein Homology CDS 6165 6434 . + 0 ID=cds-WP_002209257.1;Parent=gene-YPIP275_RS04060;Dbxref=GenBank:WP_002209257.1;Name=WP_002209257.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=YPIP275_RS04060;product=30S ribosomal protein S15;protein_id=WP_002209257.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 6521 7875 . + . ID=gene-YPIP275_RS28435;Name=YPIP275_RS28435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28435 NZ_AAOS02000004.1 Protein Homology CDS 6521 6971 . + 0 ID=cds-WP_100067904.1-5;Parent=gene-YPIP275_RS28435;Dbxref=GenBank:WP_100067904.1;Name=WP_100067904.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558220.1;locus_tag=YPIP275_RS28435;product=IS3-like element IS1661 family transposase;protein_id=WP_100067904.1;transl_table=11 NZ_AAOS02000004.1 Protein Homology CDS 6971 7875 . + 2 ID=cds-WP_100067904.1-5;Parent=gene-YPIP275_RS28435;Dbxref=GenBank:WP_100067904.1;Name=WP_100067904.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558220.1;locus_tag=YPIP275_RS28435;product=IS3-like element IS1661 family transposase;protein_id=WP_100067904.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 8142 10259 . + . ID=gene-YPIP275_RS04075;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=YPIP275_RS04075;old_locus_tag=YPIP275_4028 NZ_AAOS02000004.1 Protein Homology CDS 8142 10259 . + 0 ID=cds-WP_002209259.1;Parent=gene-YPIP275_RS04075;Dbxref=GenBank:WP_002209259.1;Name=WP_002209259.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228303.1;locus_tag=YPIP275_RS04075;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_002209259.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 10384 11268 . + . ID=gene-YPIP275_RS04080;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=YPIP275_RS04080;old_locus_tag=YPIP275_4029 NZ_AAOS02000004.1 Protein Homology CDS 10384 11268 . + 0 ID=cds-WP_002209260.1;Parent=gene-YPIP275_RS04080;Dbxref=GenBank:WP_002209260.1;Name=WP_002209260.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=YPIP275_RS04080;product=lipoprotein NlpI;protein_id=WP_002209260.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 11391 11465 . + . ID=gene-YPIP275_RS28440;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=YPIP275_RS28440 NZ_AAOS02000004.1 Protein Homology CDS 11391 11465 . + 0 ID=cds-WP_223499600.1;Parent=gene-YPIP275_RS28440;Dbxref=GenBank:WP_223499600.1;Name=WP_223499600.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: protein motif:HMM:NF033440.0;locus_tag=YPIP275_RS28440;product=protein YrbN;protein_id=WP_223499600.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 11455 13449 . + . ID=gene-YPIP275_RS04085;Name=YPIP275_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04085;old_locus_tag=YPIP275_4030 NZ_AAOS02000004.1 Protein Homology CDS 11455 13449 . + 0 ID=cds-WP_002209261.1;Parent=gene-YPIP275_RS04085;Dbxref=GenBank:WP_002209261.1;Name=WP_002209261.1;Ontology_term=GO:0000027,GO:0003724,GO:0005524;gbkey=CDS;go_function=RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209261.1;locus_tag=YPIP275_RS04085;product=DEAD/DEAH family ATP-dependent RNA helicase;protein_id=WP_002209261.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 13685 14053 . + . ID=gene-YPIP275_RS04095;Name=YPIP275_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04095 NZ_AAOS02000004.1 Protein Homology CDS 13685 14053 . + 0 ID=cds-WP_002214818.1;Parent=gene-YPIP275_RS04095;Dbxref=GenBank:WP_002214818.1;Name=WP_002214818.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214818.1;locus_tag=YPIP275_RS04095;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_002214818.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 14077 14388 . + . ID=gene-YPIP275_RS04100;Name=YPIP275_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04100;old_locus_tag=YPIP275_4032 NZ_AAOS02000004.1 Protein Homology CDS 14077 14388 . + 0 ID=cds-WP_002209263.1;Parent=gene-YPIP275_RS04100;Dbxref=GenBank:WP_002209263.1;Name=WP_002209263.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209263.1;locus_tag=YPIP275_RS04100;product=helix-turn-helix domain-containing protein;protein_id=WP_002209263.1;transl_table=11 NZ_AAOS02000004.1 RefSeq pseudogene 14519 14596 . + . ID=gene-YPIP275_RS26830;Name=YPIP275_RS26830;end_range=14596,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS26830;partial=true;pseudo=true NZ_AAOS02000004.1 Protein Homology CDS 14519 14596 . + 0 ID=cds-YPIP275_RS26830;Parent=gene-YPIP275_RS26830;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=14596,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378124.1;locus_tag=YPIP275_RS26830;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 14643 15698 . - . ID=gene-YPIP275_RS04105;Name=YPIP275_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04105;old_locus_tag=YPIP275_4033 NZ_AAOS02000004.1 Protein Homology CDS 14643 15698 . - 0 ID=cds-WP_002214817.1;Parent=gene-YPIP275_RS04105;Dbxref=GenBank:WP_002214817.1;Name=WP_002214817.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214817.1;locus_tag=YPIP275_RS04105;product=luciferase-like monooxygenase;protein_id=WP_002214817.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 16206 17366 . + . ID=gene-YPIP275_RS04110;Name=YPIP275_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04110;old_locus_tag=YPIP275_4035 NZ_AAOS02000004.1 Protein Homology CDS 16206 17366 . + 0 ID=cds-WP_002209266.1;Parent=gene-YPIP275_RS04110;Dbxref=GenBank:WP_002209266.1;Name=WP_002209266.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105741.1;locus_tag=YPIP275_RS04110;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_002209266.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 17370 20495 . + . ID=gene-YPIP275_RS04115;Name=YPIP275_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04115;old_locus_tag=YPIP275_4036 NZ_AAOS02000004.1 Protein Homology CDS 17370 20495 . + 0 ID=cds-WP_002209267.1;Parent=gene-YPIP275_RS04115;Dbxref=GenBank:WP_002209267.1;Name=WP_002209267.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209267.1;locus_tag=YPIP275_RS04115;product=efflux RND transporter permease subunit;protein_id=WP_002209267.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 20497 21903 . + . ID=gene-YPIP275_RS04120;Name=YPIP275_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04120;old_locus_tag=YPIP275_4037 NZ_AAOS02000004.1 Protein Homology CDS 20497 21903 . + 0 ID=cds-WP_002209268.1;Parent=gene-YPIP275_RS04120;Dbxref=GenBank:WP_002209268.1;Name=WP_002209268.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209268.1;locus_tag=YPIP275_RS04120;product=efflux transporter outer membrane subunit;protein_id=WP_002209268.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 22044 22922 . - . ID=gene-YPIP275_RS04125;Name=YPIP275_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04125;old_locus_tag=YPIP275_4038 NZ_AAOS02000004.1 Protein Homology CDS 22044 22922 . - 0 ID=cds-WP_002209269.1;Parent=gene-YPIP275_RS04125;Dbxref=GenBank:WP_002209269.1;Name=WP_002209269.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304652.1;locus_tag=YPIP275_RS04125;product=U32 family peptidase;protein_id=WP_002209269.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 22934 23929 . - . ID=gene-YPIP275_RS04130;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=YPIP275_RS04130;old_locus_tag=YPIP275_4039 NZ_AAOS02000004.1 Protein Homology CDS 22934 23929 . - 0 ID=cds-WP_002209270.1;Parent=gene-YPIP275_RS04130;Dbxref=GenBank:WP_002209270.1;Name=WP_002209270.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=YPIP275_RS04130;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_002209270.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 24245 24766 . + . ID=gene-YPIP275_RS04140;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=YPIP275_RS04140;old_locus_tag=YPIP275_4041 NZ_AAOS02000004.1 Protein Homology CDS 24245 24766 . + 0 ID=cds-WP_002209272.1;Parent=gene-YPIP275_RS04140;Dbxref=GenBank:WP_002209272.1;Name=WP_002209272.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209272.1;locus_tag=YPIP275_RS04140;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_002209272.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 24760 25266 . + . ID=gene-YPIP275_RS04145;Name=YPIP275_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04145;old_locus_tag=YPIP275_4042 NZ_AAOS02000004.1 Protein Homology CDS 24760 25266 . + 0 ID=cds-WP_002209273.1;Parent=gene-YPIP275_RS04145;Dbxref=GenBank:WP_002209273.1;Name=WP_002209273.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209273.1;locus_tag=YPIP275_RS04145;product=GNAT family N-acetyltransferase;protein_id=WP_002209273.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 25441 25728 . - . ID=gene-YPIP275_RS04150;Name=YPIP275_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04150;old_locus_tag=YPIP275_4043 NZ_AAOS02000004.1 Protein Homology CDS 25441 25728 . - 0 ID=cds-WP_002209274.1;Parent=gene-YPIP275_RS04150;Dbxref=GenBank:WP_002209274.1;Name=WP_002209274.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209274.1;locus_tag=YPIP275_RS04150;product=GIY-YIG nuclease family protein;protein_id=WP_002209274.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 25959 27977 . - . ID=gene-YPIP275_RS04155;Name=YPIP275_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04155;old_locus_tag=YPIP275_4044 NZ_AAOS02000004.1 Protein Homology CDS 25959 27977 . - 0 ID=cds-WP_002209275.1;Parent=gene-YPIP275_RS04155;Dbxref=GenBank:WP_002209275.1;Name=WP_002209275.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209275.1;locus_tag=YPIP275_RS04155;product=heparinase II/III domain-containing protein;protein_id=WP_002209275.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 28001 29224 . - . ID=gene-YPIP275_RS04160;Name=YPIP275_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04160;old_locus_tag=YPIP275_4045 NZ_AAOS02000004.1 Protein Homology CDS 28001 29224 . - 0 ID=cds-WP_002209276.1;Parent=gene-YPIP275_RS04160;Dbxref=GenBank:WP_002209276.1;Name=WP_002209276.1;Ontology_term=GO:0016829,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304649.1;locus_tag=YPIP275_RS04160;product=alginate lyase family protein;protein_id=WP_002209276.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 29785 31098 . + . ID=gene-YPIP275_RS04165;Name=YPIP275_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04165;old_locus_tag=YPIP275_4046 NZ_AAOS02000004.1 Protein Homology CDS 29785 31098 . + 0 ID=cds-WP_002209277.1;Parent=gene-YPIP275_RS04165;Dbxref=GenBank:WP_002209277.1;Name=WP_002209277.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191640.1;locus_tag=YPIP275_RS04165;product=ABC transporter substrate-binding protein;protein_id=WP_002209277.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 31106 31990 . + . ID=gene-YPIP275_RS04170;Name=YPIP275_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04170;old_locus_tag=YPIP275_4047 NZ_AAOS02000004.1 Protein Homology CDS 31106 31990 . + 0 ID=cds-WP_002209278.1;Parent=gene-YPIP275_RS04170;Dbxref=GenBank:WP_002209278.1;Name=WP_002209278.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815457.1;locus_tag=YPIP275_RS04170;product=carbohydrate ABC transporter permease;protein_id=WP_002209278.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 32009 32848 . + . ID=gene-YPIP275_RS04175;Name=YPIP275_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04175;old_locus_tag=YPIP275_4048 NZ_AAOS02000004.1 Protein Homology CDS 32009 32848 . + 0 ID=cds-WP_002209279.1;Parent=gene-YPIP275_RS04175;Dbxref=GenBank:WP_002209279.1;Name=WP_002209279.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707080.1;locus_tag=YPIP275_RS04175;product=carbohydrate ABC transporter permease;protein_id=WP_002209279.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 32860 33954 . + . ID=gene-YPIP275_RS04180;Name=YPIP275_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04180;old_locus_tag=YPIP275_4049 NZ_AAOS02000004.1 Protein Homology CDS 32860 33954 . + 0 ID=cds-WP_002209280.1;Parent=gene-YPIP275_RS04180;Dbxref=GenBank:WP_002209280.1;Name=WP_002209280.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209280.1;locus_tag=YPIP275_RS04180;product=ABC transporter ATP-binding protein;protein_id=WP_002209280.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 33969 35135 . + . ID=gene-YPIP275_RS04185;Name=YPIP275_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04185;old_locus_tag=YPIP275_4050 NZ_AAOS02000004.1 Protein Homology CDS 33969 35135 . + 0 ID=cds-WP_002209281.1;Parent=gene-YPIP275_RS04185;Dbxref=GenBank:WP_002209281.1;Name=WP_002209281.1;Ontology_term=GO:0016829,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209281.1;locus_tag=YPIP275_RS04185;product=alginate lyase family protein;protein_id=WP_002209281.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 35234 35677 . + . ID=gene-YPIP275_RS04190;Name=YPIP275_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04190;old_locus_tag=YPIP275_4051 NZ_AAOS02000004.1 Protein Homology CDS 35234 35677 . + 0 ID=cds-WP_002209282.1;Parent=gene-YPIP275_RS04190;Dbxref=GenBank:WP_002209282.1;Name=WP_002209282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209282.1;locus_tag=YPIP275_RS04190;product=YhbP family protein;protein_id=WP_002209282.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 35829 36467 . + . ID=gene-YPIP275_RS04195;Name=YPIP275_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04195;old_locus_tag=YPIP275_4052 NZ_AAOS02000004.1 Protein Homology CDS 35829 36467 . + 0 ID=cds-WP_002209283.1;Parent=gene-YPIP275_RS04195;Dbxref=GenBank:WP_002209283.1;Name=WP_002209283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209283.1;locus_tag=YPIP275_RS04195;product=Rossmann-fold NAD(P)-binding domain-containing protein;protein_id=WP_002209283.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 36480 37232 . - . ID=gene-YPIP275_RS04200;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=YPIP275_RS04200;old_locus_tag=YPIP275_4053 NZ_AAOS02000004.1 Protein Homology CDS 36480 37232 . - 0 ID=cds-WP_002209284.1;Parent=gene-YPIP275_RS04200;Dbxref=GenBank:WP_002209284.1;Name=WP_002209284.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304647.1;locus_tag=YPIP275_RS04200;product=phosphonate metabolism protein PhnP;protein_id=WP_002209284.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 37223 37804 . - . ID=gene-YPIP275_RS04205;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=YPIP275_RS04205;old_locus_tag=YPIP275_4054 NZ_AAOS02000004.1 Protein Homology CDS 37223 37804 . - 0 ID=cds-WP_002209285.1;Parent=gene-YPIP275_RS04205;Dbxref=GenBank:WP_002209285.1;Name=WP_002209285.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209285.1;locus_tag=YPIP275_RS04205;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_002209285.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 37804 38940 . - . ID=gene-YPIP275_RS04210;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=YPIP275_RS04210;old_locus_tag=YPIP275_4055 NZ_AAOS02000004.1 Protein Homology CDS 37804 38940 . - 0 ID=cds-WP_002209286.1;Parent=gene-YPIP275_RS04210;Dbxref=GenBank:WP_002209286.1;Name=WP_002209286.1;Ontology_term=GO:0019700,GO:0016810;gbkey=CDS;gene=phnM;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209286.1;locus_tag=YPIP275_RS04210;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_002209286.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 38937 39656 . - . ID=gene-YPIP275_RS04215;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=YPIP275_RS04215;old_locus_tag=YPIP275_4056 NZ_AAOS02000004.1 Protein Homology CDS 38937 39656 . - 0 ID=cds-WP_002209287.1;Parent=gene-YPIP275_RS04215;Dbxref=GenBank:WP_002209287.1;Name=WP_002209287.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnL;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105733.1;locus_tag=YPIP275_RS04215;product=phosphonate C-P lyase system protein PhnL;protein_id=WP_002209287.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 40045 40836 . - . ID=gene-YPIP275_RS04220;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=YPIP275_RS04220;old_locus_tag=YPIP275_4057 NZ_AAOS02000004.1 Protein Homology CDS 40045 40836 . - 0 ID=cds-WP_002209288.1;Parent=gene-YPIP275_RS04220;Dbxref=GenBank:WP_002209288.1;Name=WP_002209288.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnK;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191645.1;locus_tag=YPIP275_RS04220;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_002209288.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 40836 41717 . - . ID=gene-YPIP275_RS04225;Name=YPIP275_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04225;old_locus_tag=YPIP275_4058 NZ_AAOS02000004.1 Protein Homology CDS 40836 41717 . - 0 ID=cds-WP_002209289.1;Parent=gene-YPIP275_RS04225;Dbxref=GenBank:WP_002209289.1;Name=WP_002209289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209289.1;locus_tag=YPIP275_RS04225;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;protein_id=WP_002209289.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 41710 42888 . - . ID=gene-YPIP275_RS04230;Name=YPIP275_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04230;old_locus_tag=YPIP275_4059 NZ_AAOS02000004.1 Protein Homology CDS 41710 42888 . - 0 ID=cds-WP_002209290.1;Parent=gene-YPIP275_RS04230;Dbxref=GenBank:WP_002209290.1;Name=WP_002209290.1;Ontology_term=GO:0019634;gbkey=CDS;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304643.1;locus_tag=YPIP275_RS04230;product=carbon-phosphorus lyase complex subunit;protein_id=WP_002209290.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 42888 43514 . - . ID=gene-YPIP275_RS04235;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=YPIP275_RS04235;old_locus_tag=YPIP275_4060 NZ_AAOS02000004.1 Protein Homology CDS 42888 43514 . - 0 ID=cds-WP_002209291.1;Parent=gene-YPIP275_RS04235;Dbxref=GenBank:WP_002209291.1;Name=WP_002209291.1;Ontology_term=GO:0019634;gbkey=CDS;gene=phnH;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191648.1;locus_tag=YPIP275_RS04235;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_002209291.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 43514 43990 . - . ID=gene-YPIP275_RS28445;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=YPIP275_RS28445;old_locus_tag=YPIP275_4061 NZ_AAOS02000004.1 Protein Homology CDS 43514 43990 . - 0 ID=cds-WP_002209292.1;Parent=gene-YPIP275_RS28445;Dbxref=GenBank:WP_002209292.1;Name=WP_002209292.1;Ontology_term=GO:0015716,GO:0019634;gbkey=CDS;gene=phnG;go_process=organic phosphonate transport|0015716||IEA,organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209292.1;locus_tag=YPIP275_RS28445;product=phosphonate C-P lyase system protein PhnG;protein_id=WP_002209292.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 43991 44716 . - . ID=gene-YPIP275_RS28450;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=YPIP275_RS28450;old_locus_tag=YPIP275_4062 NZ_AAOS02000004.1 Protein Homology CDS 43991 44716 . - 0 ID=cds-WP_002209293.1;Parent=gene-YPIP275_RS28450;Dbxref=GenBank:WP_002209293.1;Name=WP_002209293.1;gbkey=CDS;gene=phnF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304641.1;locus_tag=YPIP275_RS28450;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_002209293.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 45044 45508 . - . ID=gene-YPIP275_RS04250;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=YPIP275_RS04250;old_locus_tag=YPIP275_4064 NZ_AAOS02000004.1 Protein Homology CDS 45044 45508 . - 0 ID=cds-WP_025470743.1;Parent=gene-YPIP275_RS04250;Dbxref=GenBank:WP_025470743.1;Name=WP_025470743.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=YPIP275_RS04250;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_025470743.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 45685 47823 . - . ID=gene-YPIP275_RS04255;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=YPIP275_RS04255;old_locus_tag=YPIP275_4065 NZ_AAOS02000004.1 Protein Homology CDS 45685 47823 . - 0 ID=cds-WP_002209296.1;Parent=gene-YPIP275_RS04255;Dbxref=GenBank:WP_002209296.1;Name=WP_002209296.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389268.1;locus_tag=YPIP275_RS04255;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_002209296.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 48257 48973 . - . ID=gene-YPIP275_RS04260;Name=YPIP275_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04260;old_locus_tag=YPIP275_4066 NZ_AAOS02000004.1 Protein Homology CDS 48257 48973 . - 0 ID=cds-WP_002209297.1;Parent=gene-YPIP275_RS04260;Dbxref=GenBank:WP_002209297.1;Name=WP_002209297.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209297.1;locus_tag=YPIP275_RS04260;product=ABC transporter ATP-binding protein;protein_id=WP_002209297.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 48960 49838 . - . ID=gene-YPIP275_RS04265;Name=YPIP275_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04265;old_locus_tag=YPIP275_4067 NZ_AAOS02000004.1 Protein Homology CDS 48960 49838 . - 0 ID=cds-WP_002209298.1;Parent=gene-YPIP275_RS04265;Dbxref=GenBank:WP_002209298.1;Name=WP_002209298.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815471.1;locus_tag=YPIP275_RS04265;product=ABC transporter ATP-binding protein;protein_id=WP_002209298.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 49831 50667 . - . ID=gene-YPIP275_RS04270;Name=YPIP275_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04270;old_locus_tag=YPIP275_4068 NZ_AAOS02000004.1 Protein Homology CDS 49831 50667 . - 0 ID=cds-WP_002209299.1;Parent=gene-YPIP275_RS04270;Dbxref=GenBank:WP_002209299.1;Name=WP_002209299.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209299.1;locus_tag=YPIP275_RS04270;product=ABC transporter permease;protein_id=WP_002209299.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 50686 51735 . - . ID=gene-YPIP275_RS04275;Name=YPIP275_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04275;old_locus_tag=YPIP275_4069 NZ_AAOS02000004.1 Protein Homology CDS 50686 51735 . - 0 ID=cds-WP_002209300.1;Parent=gene-YPIP275_RS04275;Dbxref=GenBank:WP_002209300.1;Name=WP_002209300.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815472.1;locus_tag=YPIP275_RS04275;product=ABC transporter permease;protein_id=WP_002209300.1;transl_table=11 NZ_AAOS02000004.1 RefSeq pseudogene 51831 53398 . - . ID=gene-YPIP275_RS04280;Name=YPIP275_RS04280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS04280;old_locus_tag=YPIP275_4070;pseudo=true NZ_AAOS02000004.1 Protein Homology CDS 51831 53398 . - 0 ID=cds-YPIP275_RS04280;Parent=gene-YPIP275_RS04280;Note=frameshifted;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080649.1;locus_tag=YPIP275_RS04280;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 54037 54495 . + . ID=gene-YPIP275_RS04285;Name=YPIP275_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04285;old_locus_tag=YPIP275_4071 NZ_AAOS02000004.1 Protein Homology CDS 54037 54495 . + 0 ID=cds-WP_002209301.1;Parent=gene-YPIP275_RS04285;Dbxref=GenBank:WP_002209301.1;Name=WP_002209301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012230161.1;locus_tag=YPIP275_RS04285;product=NanQ anomerase/TabA/YiaL family protein;protein_id=WP_002209301.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 54802 55809 . - . ID=gene-YPIP275_RS04290;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=YPIP275_RS04290;old_locus_tag=YPIP275_4072 NZ_AAOS02000004.1 Protein Homology CDS 54802 55809 . - 0 ID=cds-WP_002209302.1;Parent=gene-YPIP275_RS04290;Dbxref=GenBank:WP_002209302.1;Name=WP_002209302.1;Ontology_term=GO:0006526,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105725.1;locus_tag=YPIP275_RS04290;product=ornithine carbamoyltransferase;protein_id=WP_002209302.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 56021 56452 . + . ID=gene-YPIP275_RS04295;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=YPIP275_RS04295;old_locus_tag=YPIP275_4073 NZ_AAOS02000004.1 Protein Homology CDS 56021 56452 . + 0 ID=cds-WP_002209303.1;Parent=gene-YPIP275_RS04295;Dbxref=GenBank:WP_002209303.1;Name=WP_002209303.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156155.1;locus_tag=YPIP275_RS04295;product=ribonuclease E inhibitor RraB;protein_id=WP_002209303.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 56959 57462 . - . ID=gene-YPIP275_RS04300;Name=YPIP275_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04300;old_locus_tag=YPIP275_4074 NZ_AAOS02000004.1 Protein Homology CDS 56959 57462 . - 0 ID=cds-WP_002223170.1;Parent=gene-YPIP275_RS04300;Dbxref=GenBank:WP_002223170.1;Name=WP_002223170.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304639.1;locus_tag=YPIP275_RS04300;product=GNAT family N-acetyltransferase;protein_id=WP_002223170.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 57605 60502 . - . ID=gene-YPIP275_RS04305;Name=YPIP275_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04305;old_locus_tag=YPIP275_4076 NZ_AAOS02000004.1 Protein Homology CDS 57605 60502 . - 0 ID=cds-WP_002209307.1;Parent=gene-YPIP275_RS04305;Dbxref=GenBank:WP_002209307.1;Name=WP_002209307.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720449.1;locus_tag=YPIP275_RS04305;product=valine--tRNA ligase;protein_id=WP_002209307.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 60515 60964 . - . ID=gene-YPIP275_RS04310;Name=YPIP275_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04310;old_locus_tag=YPIP275_4077 NZ_AAOS02000004.1 Protein Homology CDS 60515 60964 . - 0 ID=cds-WP_002209309.1;Parent=gene-YPIP275_RS04310;Dbxref=GenBank:WP_002209309.1;Name=WP_002209309.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209309.1;locus_tag=YPIP275_RS04310;product=DNA polymerase III subunit chi;protein_id=WP_002209309.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 61115 62626 . - . ID=gene-YPIP275_RS04315;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=YPIP275_RS04315;old_locus_tag=YPIP275_4078 NZ_AAOS02000004.1 Protein Homology CDS 61115 62626 . - 0 ID=cds-WP_002209310.1;Parent=gene-YPIP275_RS04315;Dbxref=GenBank:WP_002209310.1;Name=WP_002209310.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007767120.1;locus_tag=YPIP275_RS04315;product=leucyl aminopeptidase;protein_id=WP_002209310.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 62906 64000 . + . ID=gene-YPIP275_RS04320;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=YPIP275_RS04320;old_locus_tag=YPIP275_4079 NZ_AAOS02000004.1 Protein Homology CDS 62906 64000 . + 0 ID=cds-WP_002209311.1;Parent=gene-YPIP275_RS04320;Dbxref=GenBank:WP_002209311.1;Name=WP_002209311.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389287.1;locus_tag=YPIP275_RS04320;product=LPS export ABC transporter permease LptF;protein_id=WP_002209311.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 64000 65076 . + . ID=gene-YPIP275_RS04325;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=YPIP275_RS04325;old_locus_tag=YPIP275_4080 NZ_AAOS02000004.1 Protein Homology CDS 64000 65076 . + 0 ID=cds-WP_002209312.1;Parent=gene-YPIP275_RS04325;Dbxref=GenBank:WP_002209312.1;Name=WP_002209312.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223173.1;locus_tag=YPIP275_RS04325;product=LPS export ABC transporter permease LptG;protein_id=WP_002209312.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 65181 65265 . + . ID=gene-YPIP275_RS04330;Name=YPIP275_RS04330;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS04330;old_locus_tag=YPIP275_4081 NZ_AAOS02000004.1 tRNAscan-SE tRNA 65181 65265 . + . ID=rna-YPIP275_RS04330;Parent=gene-YPIP275_RS04330;anticodon=(pos:65215..65217);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS04330;product=tRNA-Leu NZ_AAOS02000004.1 tRNAscan-SE exon 65181 65265 . + . ID=exon-YPIP275_RS04330-1;Parent=rna-YPIP275_RS04330;anticodon=(pos:65215..65217);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS04330;product=tRNA-Leu NZ_AAOS02000004.1 RefSeq gene 65464 66723 . + . ID=gene-YPIP275_RS04335;Name=YPIP275_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04335;old_locus_tag=YPIP275_4082 NZ_AAOS02000004.1 Protein Homology CDS 65464 66723 . + 0 ID=cds-WP_002209313.1;Parent=gene-YPIP275_RS04335;Dbxref=GenBank:WP_002209313.1;Name=WP_002209313.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683738.1;locus_tag=YPIP275_RS04335;product=tyrosine-type recombinase/integrase;protein_id=WP_002209313.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 66877 68787 . + . ID=gene-YPIP275_RS04340;Name=YPIP275_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04340;old_locus_tag=YPIP275_4083 NZ_AAOS02000004.1 Protein Homology CDS 66877 68787 . + 0 ID=cds-WP_002209314.1;Parent=gene-YPIP275_RS04340;Dbxref=GenBank:WP_002209314.1;Name=WP_002209314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209314.1;locus_tag=YPIP275_RS04340;product=DUF262 domain-containing protein;protein_id=WP_002209314.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 68780 69889 . + . ID=gene-YPIP275_RS04345;Name=YPIP275_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04345;old_locus_tag=YPIP275_4084 NZ_AAOS02000004.1 Protein Homology CDS 68780 69889 . + 0 ID=cds-WP_002209315.1;Parent=gene-YPIP275_RS04345;Dbxref=GenBank:WP_002209315.1;Name=WP_002209315.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024977.7;locus_tag=YPIP275_RS04345;product=ATP-binding protein;protein_id=WP_002209315.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 69940 70722 . - . ID=gene-YPIP275_RS04350;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS04350;old_locus_tag=YPIP275_4085 NZ_AAOS02000004.1 Protein Homology CDS 69940 70722 . - 0 ID=cds-WP_001317493.1-42;Parent=gene-YPIP275_RS04350;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS04350;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 70719 71741 . - . ID=gene-YPIP275_RS04355;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS04355;old_locus_tag=YPIP275_4086 NZ_AAOS02000004.1 Protein Homology CDS 70719 71741 . - 0 ID=cds-WP_000255944.1-36;Parent=gene-YPIP275_RS04355;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS04355;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 71852 72310 . + . ID=gene-YPIP275_RS04360;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS04360;old_locus_tag=YPIP275_4087 NZ_AAOS02000004.1 Protein Homology CDS 71852 72310 . + 0 ID=cds-WP_002213759.1-26;Parent=gene-YPIP275_RS04360;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS04360;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 72500 72706 . - . ID=gene-YPIP275_RS04365;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=YPIP275_RS04365;old_locus_tag=YPIP275_4088 NZ_AAOS02000004.1 Protein Homology CDS 72500 72706 . - 0 ID=cds-WP_002209317.1;Parent=gene-YPIP275_RS04365;Dbxref=GenBank:WP_002209317.1;Name=WP_002209317.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209317.1;locus_tag=YPIP275_RS04365;product=DNA gyrase inhibitor YacG;protein_id=WP_002209317.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 72892 73644 . - . ID=gene-YPIP275_RS04370;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=YPIP275_RS04370;old_locus_tag=YPIP275_4089 NZ_AAOS02000004.1 Protein Homology CDS 72892 73644 . - 0 ID=cds-WP_002209318.1;Parent=gene-YPIP275_RS04370;Dbxref=GenBank:WP_002209318.1;Name=WP_002209318.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080502.1;locus_tag=YPIP275_RS04370;product=cell division protein ZapD;protein_id=WP_002209318.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 73641 74261 . - . ID=gene-YPIP275_RS04375;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=YPIP275_RS04375;old_locus_tag=YPIP275_4090 NZ_AAOS02000004.1 Protein Homology CDS 73641 74261 . - 0 ID=cds-WP_002209319.1;Parent=gene-YPIP275_RS04375;Dbxref=GenBank:WP_002209319.1;Name=WP_002209319.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209319.1;locus_tag=YPIP275_RS04375;product=dephospho-CoA kinase;protein_id=WP_002209319.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 74271 74471 . - . ID=gene-YPIP275_RS04380;Name=YPIP275_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04380 NZ_AAOS02000004.1 Protein Homology CDS 74271 74471 . - 0 ID=cds-WP_002354912.1;Parent=gene-YPIP275_RS04380;Dbxref=GenBank:WP_002354912.1;Name=WP_002354912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354912.1;locus_tag=YPIP275_RS04380;product=hypothetical protein;protein_id=WP_002354912.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 74557 75600 . + . ID=gene-YPIP275_RS04385;Name=YPIP275_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04385;old_locus_tag=YPIP275_4091 NZ_AAOS02000004.1 Protein Homology CDS 74557 75600 . + 0 ID=cds-WP_002209320.1;Parent=gene-YPIP275_RS04385;Dbxref=GenBank:WP_002209320.1;Name=WP_002209320.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209320.1;locus_tag=YPIP275_RS04385;product=GMP reductase;protein_id=WP_002209320.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 76043 77242 . - . ID=gene-YPIP275_RS04390;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=YPIP275_RS04390;old_locus_tag=YPIP275_4092 NZ_AAOS02000004.1 Protein Homology CDS 76043 77242 . - 0 ID=cds-WP_002209321.1;Parent=gene-YPIP275_RS04390;Dbxref=GenBank:WP_002209321.1;Name=WP_002209321.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191739.1;locus_tag=YPIP275_RS04390;product=protein transport protein HofC;protein_id=WP_002209321.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 77239 78777 . - . ID=gene-YPIP275_RS04395;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=YPIP275_RS04395;old_locus_tag=YPIP275_4093 NZ_AAOS02000004.1 Protein Homology CDS 77239 78777 . - 0 ID=cds-WP_002216083.1;Parent=gene-YPIP275_RS04395;Dbxref=GenBank:WP_002216083.1;Name=WP_002216083.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191740.1;locus_tag=YPIP275_RS04395;product=type II secretion system protein GspE;protein_id=WP_002216083.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 78770 79234 . - . ID=gene-YPIP275_RS04400;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=YPIP275_RS04400;old_locus_tag=YPIP275_4094 NZ_AAOS02000004.1 Protein Homology CDS 78770 79234 . - 0 ID=cds-WP_002209323.1;Parent=gene-YPIP275_RS04400;Dbxref=GenBank:WP_002209323.1;Name=WP_002209323.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209323.1;locus_tag=YPIP275_RS04400;product=prepilin peptidase-dependent pilin;protein_id=WP_002209323.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 79437 80345 . - . ID=gene-YPIP275_RS04405;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=YPIP275_RS04405;old_locus_tag=YPIP275_4095 NZ_AAOS02000004.1 Protein Homology CDS 79437 80345 . - 0 ID=cds-WP_002209324.1;Parent=gene-YPIP275_RS04405;Dbxref=GenBank:WP_002209324.1;Name=WP_002209324.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209324.1;locus_tag=YPIP275_RS04405;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_002209324.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 80458 81009 . + . ID=gene-YPIP275_RS04410;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=YPIP275_RS04410;old_locus_tag=YPIP275_4096 NZ_AAOS02000004.1 Protein Homology CDS 80458 81009 . + 0 ID=cds-WP_002209325.1;Parent=gene-YPIP275_RS04410;Dbxref=GenBank:WP_002209325.1;Name=WP_002209325.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209325.1;locus_tag=YPIP275_RS04410;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_002209325.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 81299 82153 . + . ID=gene-YPIP275_RS04415;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=YPIP275_RS04415;old_locus_tag=YPIP275_4097 NZ_AAOS02000004.1 Protein Homology CDS 81299 82153 . + 0 ID=cds-WP_002209326.1;Parent=gene-YPIP275_RS04415;Dbxref=GenBank:WP_002209326.1;Name=WP_002209326.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209326.1;locus_tag=YPIP275_RS04415;product=beta-lactamase regulator AmpE;protein_id=WP_002209326.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 82571 83968 . - . ID=gene-YPIP275_RS04420;Name=YPIP275_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04420;old_locus_tag=YPIP275_4098 NZ_AAOS02000004.1 Protein Homology CDS 82571 83968 . - 0 ID=cds-WP_002209327.1;Parent=gene-YPIP275_RS04420;Dbxref=GenBank:WP_002209327.1;Name=WP_002209327.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209327.1;locus_tag=YPIP275_RS04420;product=amino acid permease;protein_id=WP_002209327.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 84831 85595 . + . ID=gene-YPIP275_RS04425;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=YPIP275_RS04425;old_locus_tag=YPIP275_4099 NZ_AAOS02000004.1 Protein Homology CDS 84831 85595 . + 0 ID=cds-WP_002216080.1;Parent=gene-YPIP275_RS04425;Dbxref=GenBank:WP_002216080.1;Name=WP_002216080.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216080.1;locus_tag=YPIP275_RS04425;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_002216080.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 85791 88454 . + . ID=gene-YPIP275_RS04430;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=YPIP275_RS04430;old_locus_tag=YPIP275_4100 NZ_AAOS02000004.1 Protein Homology CDS 85791 88454 . + 0 ID=cds-WP_002209329.1;Parent=gene-YPIP275_RS04430;Dbxref=GenBank:WP_002209329.1;Name=WP_002209329.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=YPIP275_RS04430;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_002209329.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 88468 89997 . + . ID=gene-YPIP275_RS04435;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=YPIP275_RS04435;old_locus_tag=YPIP275_4101 NZ_AAOS02000004.1 Protein Homology CDS 88468 89997 . + 0 ID=cds-WP_002209330.1;Parent=gene-YPIP275_RS04435;Dbxref=GenBank:WP_002209330.1;Name=WP_002209330.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191743.1;locus_tag=YPIP275_RS04435;product=dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_002209330.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 90303 91727 . + . ID=gene-YPIP275_RS04440;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=YPIP275_RS04440;old_locus_tag=YPIP275_4103 NZ_AAOS02000004.1 Protein Homology CDS 90303 91727 . + 0 ID=cds-WP_002209332.1;Parent=gene-YPIP275_RS04440;Dbxref=GenBank:WP_002209332.1;Name=WP_002209332.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308147.1;locus_tag=YPIP275_RS04440;product=dihydrolipoyl dehydrogenase;protein_id=WP_002209332.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 91970 92428 . + . ID=gene-YPIP275_RS04450;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS04450;old_locus_tag=YPIP275_4104 NZ_AAOS02000004.1 Protein Homology CDS 91970 92428 . + 0 ID=cds-WP_002213775.1-32;Parent=gene-YPIP275_RS04450;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS04450;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 92998 95595 . + . ID=gene-YPIP275_RS04455;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=YPIP275_RS04455;old_locus_tag=YPIP275_4105 NZ_AAOS02000004.1 Protein Homology CDS 92998 95595 . + 0 ID=cds-WP_002209333.1;Parent=gene-YPIP275_RS04455;Dbxref=GenBank:WP_002209333.1;Name=WP_002209333.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=YPIP275_RS04455;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_002209333.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 95894 96253 . + . ID=gene-YPIP275_RS04460;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=YPIP275_RS04460;old_locus_tag=YPIP275_4106 NZ_AAOS02000004.1 Protein Homology CDS 95894 96253 . + 0 ID=cds-WP_002209334.1;Parent=gene-YPIP275_RS04460;Dbxref=GenBank:WP_002209334.1;Name=WP_002209334.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209334.1;locus_tag=YPIP275_RS04460;product=protein YacL;protein_id=WP_002209334.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 96364 97272 . - . ID=gene-YPIP275_RS04465;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=YPIP275_RS04465;old_locus_tag=YPIP275_4107 NZ_AAOS02000004.1 Protein Homology CDS 96364 97272 . - 0 ID=cds-WP_002209335.1;Parent=gene-YPIP275_RS04465;Dbxref=GenBank:WP_002209335.1;Name=WP_002209335.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yddG;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209335.1;locus_tag=YPIP275_RS04465;product=aromatic amino acid DMT transporter YddG;protein_id=WP_002209335.1;transl_table=11 NZ_AAOS02000004.1 RefSeq pseudogene 97381 97458 . - . ID=gene-YPIP275_RS29185;Name=YPIP275_RS29185;end_range=97458,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29185;partial=true;pseudo=true NZ_AAOS02000004.1 Protein Homology CDS 97381 97458 . - 0 ID=cds-YPIP275_RS29185;Parent=gene-YPIP275_RS29185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=97458,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_095996155.1;locus_tag=YPIP275_RS29185;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 97710 98504 . - . ID=gene-YPIP275_RS04470;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=YPIP275_RS04470;old_locus_tag=YPIP275_4109 NZ_AAOS02000004.1 Protein Homology CDS 97710 98504 . - 0 ID=cds-WP_002209337.1;Parent=gene-YPIP275_RS04470;Dbxref=GenBank:WP_002209337.1;Name=WP_002209337.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146704.1;locus_tag=YPIP275_RS04470;product=adenosylmethionine decarboxylase;protein_id=WP_002209337.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 98582 99472 . - . ID=gene-YPIP275_RS04475;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=YPIP275_RS04475;old_locus_tag=YPIP275_4110 NZ_AAOS02000004.1 Protein Homology CDS 98582 99472 . - 0 ID=cds-WP_002209338.1;Parent=gene-YPIP275_RS04475;Dbxref=GenBank:WP_002209338.1;Name=WP_002209338.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191746.1;locus_tag=YPIP275_RS04475;product=polyamine aminopropyltransferase;protein_id=WP_002209338.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 99589 99936 . - . ID=gene-YPIP275_RS04480;Name=YPIP275_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04480;old_locus_tag=YPIP275_4111 NZ_AAOS02000004.1 Protein Homology CDS 99589 99936 . - 0 ID=cds-WP_002228215.1;Parent=gene-YPIP275_RS04480;Dbxref=GenBank:WP_002228215.1;Name=WP_002228215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228215.1;locus_tag=YPIP275_RS04480;product=YacC family pilotin-like protein;protein_id=WP_002228215.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 100253 101854 . + . ID=gene-YPIP275_RS04485;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=YPIP275_RS04485;old_locus_tag=YPIP275_4112 NZ_AAOS02000004.1 Protein Homology CDS 100253 101854 . + 0 ID=cds-WP_002209340.1;Parent=gene-YPIP275_RS04485;Dbxref=GenBank:WP_002209340.1;Name=WP_002209340.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209340.1;locus_tag=YPIP275_RS04485;product=multicopper oxidase CueO;protein_id=WP_002209340.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 102065 102610 . + . ID=gene-YPIP275_RS04490;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=YPIP275_RS04490;old_locus_tag=YPIP275_4113 NZ_AAOS02000004.1 Protein Homology CDS 102065 102610 . + 0 ID=cds-WP_002209341.1;Parent=gene-YPIP275_RS04490;Dbxref=GenBank:WP_002209341.1;Name=WP_002209341.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105662.1;locus_tag=YPIP275_RS04490;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_002209341.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 102764 103426 . - . ID=gene-YPIP275_RS04495;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=YPIP275_RS04495;old_locus_tag=YPIP275_4114 NZ_AAOS02000004.1 Protein Homology CDS 102764 103426 . - 0 ID=cds-WP_002209342.1;Parent=gene-YPIP275_RS04495;Dbxref=GenBank:WP_002209342.1;Name=WP_002209342.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209342.1;locus_tag=YPIP275_RS04495;product=carbonate dehydratase;protein_id=WP_002209342.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 103662 104588 . + . ID=gene-YPIP275_RS04500;Name=YPIP275_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04500;old_locus_tag=YPIP275_4115 NZ_AAOS02000004.1 Protein Homology CDS 103662 104588 . + 0 ID=cds-WP_002209343.1;Parent=gene-YPIP275_RS04500;Dbxref=GenBank:WP_002209343.1;Name=WP_002209343.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080482.1;locus_tag=YPIP275_RS04500;product=ABC transporter ATP-binding protein;protein_id=WP_002209343.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 104585 105355 . + . ID=gene-YPIP275_RS04505;Name=YPIP275_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04505;old_locus_tag=YPIP275_4116 NZ_AAOS02000004.1 Protein Homology CDS 104585 105355 . + 0 ID=cds-WP_002209344.1;Parent=gene-YPIP275_RS04505;Dbxref=GenBank:WP_002209344.1;Name=WP_002209344.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209344.1;locus_tag=YPIP275_RS04505;product=ABC transporter permease;protein_id=WP_002209344.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 105562 106875 . + . ID=gene-YPIP275_RS04510;Name=YPIP275_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04510;old_locus_tag=YPIP275_4118 NZ_AAOS02000004.1 Protein Homology CDS 105562 106875 . + 0 ID=cds-WP_002216851.1;Parent=gene-YPIP275_RS04510;Dbxref=GenBank:WP_002216851.1;Name=WP_002216851.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216851.1;locus_tag=YPIP275_RS04510;product=polysaccharide deacetylase family protein;protein_id=WP_002216851.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 107024 107404 . - . ID=gene-YPIP275_RS04515;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=YPIP275_RS04515;old_locus_tag=YPIP275_4119 NZ_AAOS02000004.1 Protein Homology CDS 107024 107404 . - 0 ID=cds-WP_002209347.1;Parent=gene-YPIP275_RS04515;Dbxref=GenBank:WP_002209347.1;Name=WP_002209347.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673742.1;locus_tag=YPIP275_RS04515;product=aspartate 1-decarboxylase;protein_id=WP_002209347.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 107815 108669 . - . ID=gene-YPIP275_RS04520;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=YPIP275_RS04520;old_locus_tag=YPIP275_4120 NZ_AAOS02000004.1 Protein Homology CDS 107815 108669 . - 0 ID=cds-WP_002209348.1;Parent=gene-YPIP275_RS04520;Dbxref=GenBank:WP_002209348.1;Name=WP_002209348.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191752.1;locus_tag=YPIP275_RS04520;product=pantoate--beta-alanine ligase;protein_id=WP_002209348.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 108757 109554 . - . ID=gene-YPIP275_RS04525;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=YPIP275_RS04525;old_locus_tag=YPIP275_4121 NZ_AAOS02000004.1 Protein Homology CDS 108757 109554 . - 0 ID=cds-WP_002209349.1;Parent=gene-YPIP275_RS04525;Dbxref=GenBank:WP_002209349.1;Name=WP_002209349.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209349.1;locus_tag=YPIP275_RS04525;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_002209349.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 109823 110302 . - . ID=gene-YPIP275_RS04530;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=YPIP275_RS04530;old_locus_tag=YPIP275_4123 NZ_AAOS02000004.1 Protein Homology CDS 109823 110302 . - 0 ID=cds-WP_002209351.1;Parent=gene-YPIP275_RS04530;Dbxref=GenBank:WP_002209351.1;Name=WP_002209351.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209351.1;locus_tag=YPIP275_RS04530;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_002209351.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 110310 111818 . - . ID=gene-YPIP275_RS04535;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=YPIP275_RS04535;old_locus_tag=YPIP275_4124 NZ_AAOS02000004.1 Protein Homology CDS 110310 111818 . - 0 ID=cds-WP_002228219.1;Parent=gene-YPIP275_RS04535;Dbxref=GenBank:WP_002228219.1;Name=WP_002228219.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=YPIP275_RS04535;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_002228219.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 111874 112839 . - . ID=gene-YPIP275_RS04540;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=YPIP275_RS04540;old_locus_tag=YPIP275_4125 NZ_AAOS02000004.1 Protein Homology CDS 111874 112839 . - 0 ID=cds-WP_002228220.1;Parent=gene-YPIP275_RS04540;Dbxref=GenBank:WP_002228220.1;Name=WP_002228220.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231130.1;locus_tag=YPIP275_RS04540;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_002228220.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 113119 113574 . - . ID=gene-YPIP275_RS04545;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=YPIP275_RS04545;old_locus_tag=YPIP275_4126 NZ_AAOS02000004.1 Protein Homology CDS 113119 113574 . - 0 ID=cds-WP_002209354.1;Parent=gene-YPIP275_RS04545;Dbxref=GenBank:WP_002209354.1;Name=WP_002209354.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=YPIP275_RS04545;product=RNA polymerase-binding protein DksA;protein_id=WP_002209354.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 113744 114481 . - . ID=gene-YPIP275_RS04550;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=YPIP275_RS04550;old_locus_tag=YPIP275_4127 NZ_AAOS02000004.1 Protein Homology CDS 113744 114481 . - 0 ID=cds-WP_002228221.1;Parent=gene-YPIP275_RS04550;Dbxref=GenBank:WP_002228221.1;Name=WP_002228221.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032466625.1;locus_tag=YPIP275_RS04550;product=DNA/RNA nuclease SfsA;protein_id=WP_002228221.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 114594 115169 . - . ID=gene-YPIP275_RS04555;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=YPIP275_RS04555;old_locus_tag=YPIP275_4128 NZ_AAOS02000004.1 Protein Homology CDS 114594 115169 . - 0 ID=cds-WP_002209356.1;Parent=gene-YPIP275_RS04555;Dbxref=GenBank:WP_002209356.1;Name=WP_002209356.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191757.1;locus_tag=YPIP275_RS04555;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_002209356.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 115210 117771 . + . ID=gene-YPIP275_RS04560;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=YPIP275_RS04560;old_locus_tag=YPIP275_4129 NZ_AAOS02000004.1 Protein Homology CDS 115210 117771 . + 0 ID=cds-WP_002222096.1;Parent=gene-YPIP275_RS04560;Dbxref=GenBank:WP_002222096.1;Name=WP_002222096.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222096.1;locus_tag=YPIP275_RS04560;product=ATP-dependent helicase HrpB;protein_id=WP_002222096.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 117880 120354 . + . ID=gene-YPIP275_RS04565;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=YPIP275_RS04565;old_locus_tag=YPIP275_4130 NZ_AAOS02000004.1 Protein Homology CDS 117880 120354 . + 0 ID=cds-WP_002209358.1;Parent=gene-YPIP275_RS04565;Dbxref=GenBank:WP_002209358.1;Name=WP_002209358.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228223.1;locus_tag=YPIP275_RS04565;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_002209358.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 120560 121018 . + . ID=gene-YPIP275_RS04575;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS04575;old_locus_tag=YPIP275_4131 NZ_AAOS02000004.1 Protein Homology CDS 120560 121018 . + 0 ID=cds-WP_002213775.1-33;Parent=gene-YPIP275_RS04575;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS04575;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 121387 122181 . + . ID=gene-YPIP275_RS04580;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=YPIP275_RS04580;old_locus_tag=YPIP275_4132 NZ_AAOS02000004.1 Protein Homology CDS 121387 122181 . + 0 ID=cds-WP_002209359.1;Parent=gene-YPIP275_RS04580;Dbxref=GenBank:WP_002209359.1;Name=WP_002209359.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016678491.1;locus_tag=YPIP275_RS04580;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_002209359.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 122137 122379 . - . ID=gene-YPIP275_RS28455;Name=YPIP275_RS28455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28455 NZ_AAOS02000004.1 Protein Homology CDS 122137 122379 . - 0 ID=cds-WP_002366246.1;Parent=gene-YPIP275_RS28455;Dbxref=GenBank:WP_002366246.1;Name=WP_002366246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002366246.1;locus_tag=YPIP275_RS28455;product=hypothetical protein;protein_id=WP_002366246.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 122358 123269 . + . ID=gene-YPIP275_RS04585;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=YPIP275_RS04585;old_locus_tag=YPIP275_4133 NZ_AAOS02000004.1 Protein Homology CDS 122358 123269 . + 0 ID=cds-WP_002209360.1;Parent=gene-YPIP275_RS04585;Dbxref=GenBank:WP_002209360.1;Name=WP_002209360.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430132.1;locus_tag=YPIP275_RS04585;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_002209360.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 123266 125263 . + . ID=gene-YPIP275_RS04590;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=YPIP275_RS04590;old_locus_tag=YPIP275_4134 NZ_AAOS02000004.1 Protein Homology CDS 123266 125263 . + 0 ID=cds-WP_002209361.1;Parent=gene-YPIP275_RS04590;Dbxref=GenBank:WP_002209361.1;Name=WP_002209361.1;gbkey=CDS;gene=fhuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209361.1;locus_tag=YPIP275_RS04590;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_002209361.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 125637 126917 . - . ID=gene-YPIP275_RS04595;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=YPIP275_RS04595;old_locus_tag=YPIP275_4135 NZ_AAOS02000004.1 Protein Homology CDS 125637 126917 . - 0 ID=cds-WP_002209362.1;Parent=gene-YPIP275_RS04595;Dbxref=GenBank:WP_002209362.1;Name=WP_002209362.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=YPIP275_RS04595;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_002209362.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 127298 128734 . + . ID=gene-YPIP275_RS04600;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=YPIP275_RS04600;old_locus_tag=YPIP275_4137 NZ_AAOS02000004.1 Protein Homology CDS 127298 128734 . + 0 ID=cds-WP_002209364.1;Parent=gene-YPIP275_RS04600;Dbxref=GenBank:WP_002209364.1;Name=WP_002209364.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209364.1;locus_tag=YPIP275_RS04600;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_002209364.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 128870 129214 . + . ID=gene-YPIP275_RS04605;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS04605;old_locus_tag=YPIP275_4138 NZ_AAOS02000004.1 Protein Homology CDS 128870 129214 . + 0 ID=cds-WP_002209365.1;Parent=gene-YPIP275_RS04605;Dbxref=GenBank:WP_002209365.1;Name=WP_002209365.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=YPIP275_RS04605;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_002209365.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 129499 130113 . - . ID=gene-YPIP275_RS04610;Name=YPIP275_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04610;old_locus_tag=YPIP275_4139 NZ_AAOS02000004.1 Protein Homology CDS 129499 130113 . - 0 ID=cds-WP_002209366.1;Parent=gene-YPIP275_RS04610;Dbxref=GenBank:WP_002209366.1;Name=WP_002209366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256888.1;locus_tag=YPIP275_RS04610;product=TRIC cation channel family protein;protein_id=WP_002209366.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 130113 130955 . - . ID=gene-YPIP275_RS04615;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=YPIP275_RS04615;old_locus_tag=YPIP275_4140 NZ_AAOS02000004.1 Protein Homology CDS 130113 130955 . - 0 ID=cds-WP_002222100.1;Parent=gene-YPIP275_RS04615;Dbxref=GenBank:WP_002222100.1;Name=WP_002222100.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191763.1;locus_tag=YPIP275_RS04615;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_002222100.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 130955 131656 . - . ID=gene-YPIP275_RS04620;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=YPIP275_RS04620;old_locus_tag=YPIP275_4141 NZ_AAOS02000004.1 Protein Homology CDS 130955 131656 . - 0 ID=cds-WP_002209368.1;Parent=gene-YPIP275_RS04620;Dbxref=GenBank:WP_002209368.1;Name=WP_002209368.1;Ontology_term=GO:0009164,GO:0033353,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine cycle|0033353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706257.1;locus_tag=YPIP275_RS04620;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_002209368.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 131950 133470 . + . ID=gene-YPIP275_RS04625;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=YPIP275_RS04625;old_locus_tag=YPIP275_4142 NZ_AAOS02000004.1 Protein Homology CDS 131950 133470 . + 0 ID=cds-WP_002209369.1;Parent=gene-YPIP275_RS04625;Dbxref=GenBank:WP_002209369.1;Name=WP_002209369.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304564.1;locus_tag=YPIP275_RS04625;product=dGTPase;protein_id=WP_002209369.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 133668 135113 . + . ID=gene-YPIP275_RS04630;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=YPIP275_RS04630;old_locus_tag=YPIP275_4143 NZ_AAOS02000004.1 Protein Homology CDS 133668 135113 . + 0 ID=cds-WP_002209370.1;Parent=gene-YPIP275_RS04630;Dbxref=GenBank:WP_002209370.1;Name=WP_002209370.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209370.1;locus_tag=YPIP275_RS04630;product=serine endoprotease DegP;protein_id=WP_002209370.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 135272 138064 . - . ID=gene-YPIP275_RS04635;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=YPIP275_RS04635;old_locus_tag=YPIP275_4144 NZ_AAOS02000004.1 Protein Homology CDS 135272 138064 . - 0 ID=cds-WP_002209371.1;Parent=gene-YPIP275_RS04635;Dbxref=GenBank:WP_002209371.1;Name=WP_002209371.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264454.1;locus_tag=YPIP275_RS04635;product=two-component sensor histidine kinase BarA;protein_id=WP_002209371.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 138175 138357 . + . ID=gene-YPIP275_RS26860;Name=YPIP275_RS26860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26860;old_locus_tag=YPIP275_4145 NZ_AAOS02000004.1 Protein Homology CDS 138175 138357 . + 0 ID=cds-WP_002216873.1;Parent=gene-YPIP275_RS26860;Dbxref=GenBank:WP_002216873.1;Name=WP_002216873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216873.1;locus_tag=YPIP275_RS26860;product=hypothetical protein;protein_id=WP_002216873.1;transl_table=11 NZ_AAOS02000004.1 RefSeq pseudogene 138382 138498 . + . ID=gene-YPIP275_RS26865;Name=YPIP275_RS26865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS26865;old_locus_tag=YPIP275_4146;partial=true;pseudo=true;start_range=.,138382 NZ_AAOS02000004.1 Protein Homology CDS 138382 138498 . + 0 ID=cds-YPIP275_RS26865;Parent=gene-YPIP275_RS26865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083945.1;locus_tag=YPIP275_RS26865;partial=true;product=23S rRNA methyltransferase;pseudo=true;start_range=.,138382;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 138508 140742 . + . ID=gene-YPIP275_RS04640;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=YPIP275_RS04640;old_locus_tag=YPIP275_4147 NZ_AAOS02000004.1 Protein Homology CDS 138508 140742 . + 0 ID=cds-WP_002209373.1;Parent=gene-YPIP275_RS04640;Dbxref=GenBank:WP_002209373.1;Name=WP_002209373.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209373.1;locus_tag=YPIP275_RS04640;product=GTP diphosphokinase;protein_id=WP_002209373.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 140944 141786 . + . ID=gene-YPIP275_RS04650;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=YPIP275_RS04650;old_locus_tag=YPIP275_4148 NZ_AAOS02000004.1 Protein Homology CDS 140944 141786 . + 0 ID=cds-WP_002209374.1;Parent=gene-YPIP275_RS04650;Dbxref=GenBank:WP_002209374.1;Name=WP_002209374.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080461.1;locus_tag=YPIP275_RS04650;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002209374.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 141998 143635 . + . ID=gene-YPIP275_RS04655;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=YPIP275_RS04655;old_locus_tag=YPIP275_4150 NZ_AAOS02000004.1 Protein Homology CDS 141998 143635 . + 0 ID=cds-WP_002209376.1;Parent=gene-YPIP275_RS04655;Dbxref=GenBank:WP_002209376.1;Name=WP_002209376.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=YPIP275_RS04655;product=glutamine hydrolyzing CTP synthase;protein_id=WP_002209376.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 143716 145011 . + . ID=gene-YPIP275_RS04660;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=YPIP275_RS04660;old_locus_tag=YPIP275_4151 NZ_AAOS02000004.1 Protein Homology CDS 143716 145011 . + 0 ID=cds-WP_002209377.1;Parent=gene-YPIP275_RS04660;Dbxref=GenBank:WP_002209377.1;Name=WP_002209377.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005243.1;locus_tag=YPIP275_RS04660;product=phosphopyruvate hydratase;protein_id=WP_002209377.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 145446 145970 . + . ID=gene-YPIP275_RS04665;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=YPIP275_RS04665;old_locus_tag=YPIP275_4152 NZ_AAOS02000004.1 Protein Homology CDS 145446 145970 . + 0 ID=cds-WP_161993121.1;Parent=gene-YPIP275_RS04665;Dbxref=GenBank:WP_161993121.1;Name=WP_161993121.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304562.1;locus_tag=YPIP275_RS04665;product=superoxide dismutase family protein;protein_id=WP_161993121.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 146074 146745 . + . ID=gene-YPIP275_RS04670;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=YPIP275_RS04670;old_locus_tag=YPIP275_4153 NZ_AAOS02000004.1 Protein Homology CDS 146074 146745 . + 0 ID=cds-WP_002209379.1;Parent=gene-YPIP275_RS04670;Dbxref=GenBank:WP_002209379.1;Name=WP_002209379.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228497.1;locus_tag=YPIP275_RS04670;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_002209379.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 146979 147338 . - . ID=gene-YPIP275_RS04675;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=YPIP275_RS04675;old_locus_tag=YPIP275_4154 NZ_AAOS02000004.1 Protein Homology CDS 146979 147338 . - 0 ID=cds-WP_002209380.1;Parent=gene-YPIP275_RS04675;Dbxref=GenBank:WP_002209380.1;Name=WP_002209380.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304561.1;locus_tag=YPIP275_RS04675;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_002209380.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 147731 149551 . + . ID=gene-YPIP275_RS04680;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS04680;old_locus_tag=YPIP275_4155 NZ_AAOS02000004.1 Protein Homology CDS 147731 149551 . + 0 ID=cds-WP_002209381.1;Parent=gene-YPIP275_RS04680;Dbxref=GenBank:WP_002209381.1;Name=WP_002209381.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209381.1;locus_tag=YPIP275_RS04680;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_002209381.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 149551 151281 . + . ID=gene-YPIP275_RS04685;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=YPIP275_RS04685;old_locus_tag=YPIP275_4156 NZ_AAOS02000004.1 Protein Homology CDS 149551 151281 . + 0 ID=cds-WP_002209382.1;Parent=gene-YPIP275_RS04685;Dbxref=GenBank:WP_002209382.1;Name=WP_002209382.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209382.1;locus_tag=YPIP275_RS04685;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_002209382.1;transl_table=11 NZ_AAOS02000004.1 RefSeq pseudogene 151278 152004 . + . ID=gene-YPIP275_RS04690;Name=YPIP275_RS04690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS04690;old_locus_tag=YPIP275_4157;pseudo=true NZ_AAOS02000004.1 Protein Homology CDS 151278 152004 . + 0 ID=cds-YPIP275_RS04690;Parent=gene-YPIP275_RS04690;Note=frameshifted;Ontology_term=GO:0000103,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163316.1;locus_tag=YPIP275_RS04690;product=phosphoadenylyl-sulfate reductase;pseudo=true;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 152144 152254 . + . ID=gene-YPIP275_RS26870;Name=YPIP275_RS26870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26870 NZ_AAOS02000004.1 Protein Homology CDS 152144 152254 . + 0 ID=cds-WP_071525553.1;Parent=gene-YPIP275_RS26870;Dbxref=GenBank:WP_071525553.1;Name=WP_071525553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430096.1;locus_tag=YPIP275_RS26870;product=gluconate 5-dehydrogenase;protein_id=WP_071525553.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 152247 152654 . - . ID=gene-YPIP275_RS04695;Name=YPIP275_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04695;old_locus_tag=YPIP275_4158 NZ_AAOS02000004.1 Protein Homology CDS 152247 152654 . - 0 ID=cds-WP_002209383.1;Parent=gene-YPIP275_RS04695;Dbxref=GenBank:WP_002209383.1;Name=WP_002209383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209383.1;locus_tag=YPIP275_RS04695;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_002209383.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 152829 153029 . - . ID=gene-YPIP275_RS04700;Name=YPIP275_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04700;old_locus_tag=YPIP275_4159 NZ_AAOS02000004.1 Protein Homology CDS 152829 153029 . - 0 ID=cds-WP_002209384.1;Parent=gene-YPIP275_RS04700;Dbxref=GenBank:WP_002209384.1;Name=WP_002209384.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209384.1;locus_tag=YPIP275_RS04700;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_002209384.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 153122 153319 . + . ID=gene-YPIP275_RS04705;Name=YPIP275_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04705 NZ_AAOS02000004.1 Protein Homology CDS 153122 153319 . + 0 ID=cds-WP_002222261.1;Parent=gene-YPIP275_RS04705;Dbxref=GenBank:WP_002222261.1;Name=WP_002222261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222261.1;locus_tag=YPIP275_RS04705;product=hypothetical protein;protein_id=WP_002222261.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 153620 155038 . + . ID=gene-YPIP275_RS04710;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=YPIP275_RS04710;old_locus_tag=YPIP275_4160 NZ_AAOS02000004.1 Protein Homology CDS 153620 155038 . + 0 ID=cds-WP_002209385.1;Parent=gene-YPIP275_RS04710;Dbxref=GenBank:WP_002209385.1;Name=WP_002209385.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209385.1;locus_tag=YPIP275_RS04710;product=siroheme synthase CysG;protein_id=WP_002209385.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 155049 155957 . + . ID=gene-YPIP275_RS04715;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=YPIP275_RS04715;old_locus_tag=YPIP275_4161 NZ_AAOS02000004.1 Protein Homology CDS 155049 155957 . + 0 ID=cds-WP_002209386.1;Parent=gene-YPIP275_RS04715;Dbxref=GenBank:WP_002209386.1;Name=WP_002209386.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=YPIP275_RS04715;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_002209386.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 156050 157486 . + . ID=gene-YPIP275_RS04720;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=YPIP275_RS04720;old_locus_tag=YPIP275_4162 NZ_AAOS02000004.1 Protein Homology CDS 156050 157486 . + 0 ID=cds-WP_002228227.1;Parent=gene-YPIP275_RS04720;Dbxref=GenBank:WP_002228227.1;Name=WP_002228227.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228227.1;locus_tag=YPIP275_RS04720;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_002228227.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 157488 158129 . + . ID=gene-YPIP275_RS04725;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=YPIP275_RS04725;old_locus_tag=YPIP275_4163 NZ_AAOS02000004.1 Protein Homology CDS 157488 158129 . + 0 ID=cds-WP_002209388.1;Parent=gene-YPIP275_RS04725;Dbxref=GenBank:WP_002209388.1;Name=WP_002209388.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105644.1;locus_tag=YPIP275_RS04725;product=adenylyl-sulfate kinase;protein_id=WP_002209388.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 158320 158637 . + . ID=gene-YPIP275_RS04730;Name=YPIP275_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04730;old_locus_tag=YPIP275_4164 NZ_AAOS02000004.1 Protein Homology CDS 158320 158637 . + 0 ID=cds-WP_002209389.1;Parent=gene-YPIP275_RS04730;Dbxref=GenBank:WP_002209389.1;Name=WP_002209389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683729.1;locus_tag=YPIP275_RS04730;product=DUF3561 family protein;protein_id=WP_002209389.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 158951 159271 . + . ID=gene-YPIP275_RS04735;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=YPIP275_RS04735;old_locus_tag=YPIP275_4165 NZ_AAOS02000004.1 Protein Homology CDS 158951 159271 . + 0 ID=cds-WP_002209390.1;Parent=gene-YPIP275_RS04735;Dbxref=GenBank:WP_002209390.1;Name=WP_002209390.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005181642.1;locus_tag=YPIP275_RS04735;product=cell division protein FtsB;protein_id=WP_002209390.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 159275 160000 . + . ID=gene-YPIP275_RS04740;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=YPIP275_RS04740;old_locus_tag=YPIP275_4166 NZ_AAOS02000004.1 Protein Homology CDS 159275 160000 . + 0 ID=cds-WP_002209391.1;Parent=gene-YPIP275_RS04740;Dbxref=GenBank:WP_002209391.1;Name=WP_002209391.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105643.1;locus_tag=YPIP275_RS04740;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_002209391.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 160139 160627 . + . ID=gene-YPIP275_RS04745;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=YPIP275_RS04745;old_locus_tag=YPIP275_4167 NZ_AAOS02000004.1 Protein Homology CDS 160139 160627 . + 0 ID=cds-WP_002209392.1;Parent=gene-YPIP275_RS04745;Dbxref=GenBank:WP_002209392.1;Name=WP_002209392.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209392.1;locus_tag=YPIP275_RS04745;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_002209392.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 160638 161687 . + . ID=gene-YPIP275_RS04750;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=YPIP275_RS04750;old_locus_tag=YPIP275_4168 NZ_AAOS02000004.1 Protein Homology CDS 160638 161687 . + 0 ID=cds-WP_002209393.1;Parent=gene-YPIP275_RS04750;Dbxref=GenBank:WP_002209393.1;Name=WP_002209393.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413490.1;locus_tag=YPIP275_RS04750;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_002209393.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 161665 162429 . + . ID=gene-YPIP275_RS04755;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=YPIP275_RS04755;old_locus_tag=YPIP275_4169 NZ_AAOS02000004.1 Protein Homology CDS 161665 162429 . + 0 ID=cds-WP_002209394.1;Parent=gene-YPIP275_RS04755;Dbxref=GenBank:WP_002209394.1;Name=WP_002209394.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191778.1;locus_tag=YPIP275_RS04755;product=5'/3'-nucleotidase SurE;protein_id=WP_002209394.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 162423 163049 . + . ID=gene-YPIP275_RS04760;Name=YPIP275_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04760;old_locus_tag=YPIP275_4170 NZ_AAOS02000004.1 Protein Homology CDS 162423 163049 . + 0 ID=cds-WP_002209395.1;Parent=gene-YPIP275_RS04760;Dbxref=GenBank:WP_002209395.1;Name=WP_002209395.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=YPIP275_RS04760;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_002209395.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 163171 164154 . + . ID=gene-YPIP275_RS04765;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=YPIP275_RS04765;old_locus_tag=YPIP275_4171 NZ_AAOS02000004.1 Protein Homology CDS 163171 164154 . + 0 ID=cds-WP_002209396.1;Parent=gene-YPIP275_RS04765;Dbxref=GenBank:WP_002209396.1;Name=WP_002209396.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304557.1;locus_tag=YPIP275_RS04765;product=murein hydrolase activator NlpD;protein_id=WP_002209396.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 164209 165207 . + . ID=gene-YPIP275_RS04770;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=YPIP275_RS04770;old_locus_tag=YPIP275_4172 NZ_AAOS02000004.1 Protein Homology CDS 164209 165207 . + 0 ID=cds-WP_002209397.1;Parent=gene-YPIP275_RS04770;Dbxref=GenBank:WP_002209397.1;Name=WP_002209397.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=YPIP275_RS04770;product=RNA polymerase sigma factor RpoS;protein_id=WP_002209397.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 165535 168090 . - . ID=gene-YPIP275_RS04775;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=YPIP275_RS04775;old_locus_tag=YPIP275_4174 NZ_AAOS02000004.1 Protein Homology CDS 165535 168090 . - 0 ID=cds-WP_002209399.1;Parent=gene-YPIP275_RS04775;Dbxref=GenBank:WP_002209399.1;Name=WP_002209399.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815614.1;locus_tag=YPIP275_RS04775;product=DNA mismatch repair protein MutS;protein_id=WP_002209399.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 168884 169339 . - . ID=gene-YPIP275_RS04785;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=YPIP275_RS04785;old_locus_tag=YPIP275_4177 NZ_AAOS02000004.1 Protein Homology CDS 168884 169339 . - 0 ID=cds-WP_002209402.1;Parent=gene-YPIP275_RS04785;Dbxref=GenBank:WP_002209402.1;Name=WP_002209402.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiB;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016581148.1;locus_tag=YPIP275_RS04785;product=ribose 5-phosphate isomerase B;protein_id=WP_002209402.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 169822 170937 . + . ID=gene-YPIP275_RS04790;Name=YPIP275_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04790;old_locus_tag=YPIP275_4178 NZ_AAOS02000004.1 Protein Homology CDS 169822 170937 . + 0 ID=cds-WP_002209403.1;Parent=gene-YPIP275_RS04790;Dbxref=GenBank:WP_002209403.1;Name=WP_002209403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209403.1;locus_tag=YPIP275_RS04790;product=erythritol/L-threitol dehydrogenase;protein_id=WP_002209403.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 171001 171771 . + . ID=gene-YPIP275_RS04795;Name=YPIP275_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04795;old_locus_tag=YPIP275_4179 NZ_AAOS02000004.1 Protein Homology CDS 171001 171771 . + 0 ID=cds-WP_002209404.1;Parent=gene-YPIP275_RS04795;Dbxref=GenBank:WP_002209404.1;Name=WP_002209404.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209404.1;locus_tag=YPIP275_RS04795;product=SDR family oxidoreductase;protein_id=WP_002209404.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 171858 172859 . + . ID=gene-YPIP275_RS04800;Name=YPIP275_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04800;old_locus_tag=YPIP275_4180 NZ_AAOS02000004.1 Protein Homology CDS 171858 172859 . + 0 ID=cds-WP_002228229.1;Parent=gene-YPIP275_RS04800;Dbxref=GenBank:WP_002228229.1;Name=WP_002228229.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105641.1;locus_tag=YPIP275_RS04800;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_002228229.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 172866 173540 . + . ID=gene-YPIP275_RS04805;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=YPIP275_RS04805;old_locus_tag=YPIP275_4181 NZ_AAOS02000004.1 Protein Homology CDS 172866 173540 . + 0 ID=cds-WP_002209406.1;Parent=gene-YPIP275_RS04805;Dbxref=GenBank:WP_002209406.1;Name=WP_002209406.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209406.1;locus_tag=YPIP275_RS04805;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_002209406.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 173661 174632 . - . ID=gene-YPIP275_RS04810;Name=YPIP275_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04810;old_locus_tag=YPIP275_4182 NZ_AAOS02000004.1 Protein Homology CDS 173661 174632 . - 0 ID=cds-WP_002209407.1;Parent=gene-YPIP275_RS04810;Dbxref=GenBank:WP_002209407.1;Name=WP_002209407.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209407.1;locus_tag=YPIP275_RS04810;product=sugar-binding transcriptional regulator;protein_id=WP_002209407.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 175187 176476 . - . ID=gene-YPIP275_RS04815;Name=YPIP275_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04815;old_locus_tag=YPIP275_4183 NZ_AAOS02000004.1 Protein Homology CDS 175187 176476 . - 0 ID=cds-WP_002209408.1;Parent=gene-YPIP275_RS04815;Dbxref=GenBank:WP_002209408.1;Name=WP_002209408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540054.1;locus_tag=YPIP275_RS04815;product=arsenical efflux pump membrane protein ArsB;protein_id=WP_002209408.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 176561 176902 . - . ID=gene-YPIP275_RS04820;Name=YPIP275_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04820;old_locus_tag=YPIP275_4184 NZ_AAOS02000004.1 Protein Homology CDS 176561 176902 . - 0 ID=cds-WP_002209409.1;Parent=gene-YPIP275_RS04820;Dbxref=GenBank:WP_002209409.1;Name=WP_002209409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016605622.1;locus_tag=YPIP275_RS04820;product=transcriptional regulator;protein_id=WP_002209409.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 177149 177412 . - . ID=gene-YPIP275_RS04825;Name=YPIP275_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04825 NZ_AAOS02000004.1 Protein Homology CDS 177149 177412 . - 0 ID=cds-WP_002217994.1;Parent=gene-YPIP275_RS04825;Dbxref=GenBank:WP_002217994.1;Name=WP_002217994.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217994.1;locus_tag=YPIP275_RS04825;product=FaeA/PapI family transcriptional regulator;protein_id=WP_002217994.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 177623 177826 . - . ID=gene-YPIP275_RS04830;Name=YPIP275_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04830;old_locus_tag=YPIP275_4185 NZ_AAOS02000004.1 Protein Homology CDS 177623 177826 . - 0 ID=cds-WP_002209410.1;Parent=gene-YPIP275_RS04830;Dbxref=GenBank:WP_002209410.1;Name=WP_002209410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209410.1;locus_tag=YPIP275_RS04830;product=hypothetical protein;protein_id=WP_002209410.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 178250 179014 . - . ID=gene-YPIP275_RS04835;Name=YPIP275_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04835;old_locus_tag=YPIP275_4186 NZ_AAOS02000004.1 Protein Homology CDS 178250 179014 . - 0 ID=cds-WP_002209411.1;Parent=gene-YPIP275_RS04835;Dbxref=GenBank:WP_002209411.1;Name=WP_002209411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209411.1;locus_tag=YPIP275_RS04835;product=transporter substrate-binding domain-containing protein;protein_id=WP_002209411.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 179085 180464 . - . ID=gene-YPIP275_RS04840;Name=YPIP275_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04840;old_locus_tag=YPIP275_4187 NZ_AAOS02000004.1 Protein Homology CDS 179085 180464 . - 0 ID=cds-WP_002209412.1;Parent=gene-YPIP275_RS04840;Dbxref=GenBank:WP_002209412.1;Name=WP_002209412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209412.1;locus_tag=YPIP275_RS04840;product=cytochrome-c peroxidase;protein_id=WP_002209412.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 180701 180952 . - . ID=gene-YPIP275_RS04845;Name=YPIP275_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04845 NZ_AAOS02000004.1 Protein Homology CDS 180701 180952 . - 0 ID=cds-WP_002223220.1;Parent=gene-YPIP275_RS04845;Dbxref=GenBank:WP_002223220.1;Name=WP_002223220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223220.1;locus_tag=YPIP275_RS04845;product=hypothetical protein;protein_id=WP_002223220.1;transl_table=11 NZ_AAOS02000004.1 RefSeq pseudogene 181125 183221 . + . ID=gene-YPIP275_RS04850;Name=YPIP275_RS04850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS04850;old_locus_tag=YPIP275_4189;pseudo=true NZ_AAOS02000004.1 Protein Homology CDS 181125 183221 . + 0 ID=cds-YPIP275_RS04850;Parent=gene-YPIP275_RS04850;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002223222.1;locus_tag=YPIP275_RS04850;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 183654 184841 . + . ID=gene-YPIP275_RS04860;Name=YPIP275_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04860;old_locus_tag=YPIP275_4191 NZ_AAOS02000004.1 Protein Homology CDS 183654 184841 . + 0 ID=cds-WP_002209414.1;Parent=gene-YPIP275_RS04860;Dbxref=GenBank:WP_002209414.1;Name=WP_002209414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229168.1;locus_tag=YPIP275_RS04860;product=ShET2/EspL2 family type III secretion system effector toxin;protein_id=WP_002209414.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 185199 185984 . - . ID=gene-YPIP275_RS04870;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=YPIP275_RS04870;old_locus_tag=YPIP275_4193 NZ_AAOS02000004.1 Protein Homology CDS 185199 185984 . - 0 ID=cds-WP_002209416.1;Parent=gene-YPIP275_RS04870;Dbxref=GenBank:WP_002209416.1;Name=WP_002209416.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209416.1;locus_tag=YPIP275_RS04870;product=type I methionyl aminopeptidase;protein_id=WP_002209416.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 185981 186232 . - . ID=gene-YPIP275_RS04875;Name=YPIP275_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04875;old_locus_tag=YPIP275_4194 NZ_AAOS02000004.1 Protein Homology CDS 185981 186232 . - 0 ID=cds-WP_002209417.1;Parent=gene-YPIP275_RS04875;Dbxref=GenBank:WP_002209417.1;Name=WP_002209417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209417.1;locus_tag=YPIP275_RS04875;product=ParD-like family protein;protein_id=WP_002209417.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 186415 188058 . - . ID=gene-YPIP275_RS04880;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=YPIP275_RS04880;old_locus_tag=YPIP275_4195 NZ_AAOS02000004.1 Protein Homology CDS 186415 188058 . - 0 ID=cds-WP_002209418.1;Parent=gene-YPIP275_RS04880;Dbxref=GenBank:WP_002209418.1;Name=WP_002209418.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266697.1;locus_tag=YPIP275_RS04880;product=class I fumarate hydratase FumA;protein_id=WP_002209418.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 188456 189952 . - . ID=gene-YPIP275_RS04885;Name=YPIP275_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04885;old_locus_tag=YPIP275_4196 NZ_AAOS02000004.1 Protein Homology CDS 188456 189952 . - 0 ID=cds-WP_002209419.1;Parent=gene-YPIP275_RS04885;Dbxref=GenBank:WP_002209419.1;Name=WP_002209419.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191788.1;locus_tag=YPIP275_RS04885;product=FGGY-family carbohydrate kinase;protein_id=WP_002209419.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 189963 190844 . - . ID=gene-YPIP275_RS04890;Name=YPIP275_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04890;old_locus_tag=YPIP275_4197 NZ_AAOS02000004.1 Protein Homology CDS 189963 190844 . - 0 ID=cds-WP_002209420.1;Parent=gene-YPIP275_RS04890;Dbxref=GenBank:WP_002209420.1;Name=WP_002209420.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209420.1;locus_tag=YPIP275_RS04890;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_002209420.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 191050 192087 . - . ID=gene-YPIP275_RS04895;Name=YPIP275_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04895;old_locus_tag=YPIP275_4198 NZ_AAOS02000004.1 Protein Homology CDS 191050 192087 . - 0 ID=cds-WP_002216010.1;Parent=gene-YPIP275_RS04895;Dbxref=GenBank:WP_002216010.1;Name=WP_002216010.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231123.1;locus_tag=YPIP275_RS04895;product=ABC transporter permease;protein_id=WP_002216010.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 192100 193089 . - . ID=gene-YPIP275_RS04900;Name=YPIP275_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04900;old_locus_tag=YPIP275_4199 NZ_AAOS02000004.1 Protein Homology CDS 192100 193089 . - 0 ID=cds-WP_002209421.1;Parent=gene-YPIP275_RS04900;Dbxref=GenBank:WP_002209421.1;Name=WP_002209421.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105633.1;locus_tag=YPIP275_RS04900;product=ABC transporter permease;protein_id=WP_002209421.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 193082 194596 . - . ID=gene-YPIP275_RS04905;Name=YPIP275_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04905;old_locus_tag=YPIP275_4200 NZ_AAOS02000004.1 Protein Homology CDS 193082 194596 . - 0 ID=cds-WP_002209422.1;Parent=gene-YPIP275_RS04905;Dbxref=GenBank:WP_002209422.1;Name=WP_002209422.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191791.1;locus_tag=YPIP275_RS04905;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209422.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 194747 195205 . - . ID=gene-YPIP275_RS04910;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS04910;old_locus_tag=YPIP275_4201 NZ_AAOS02000004.1 Protein Homology CDS 194747 195205 . - 0 ID=cds-WP_002213775.1-34;Parent=gene-YPIP275_RS04910;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS04910;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 195456 196460 . - . ID=gene-YPIP275_RS04915;Name=YPIP275_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04915;old_locus_tag=YPIP275_4202 NZ_AAOS02000004.1 Protein Homology CDS 195456 196460 . - 0 ID=cds-WP_002216011.1;Parent=gene-YPIP275_RS04915;Dbxref=GenBank:WP_002216011.1;Name=WP_002216011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216011.1;locus_tag=YPIP275_RS04915;product=substrate-binding domain-containing protein;protein_id=WP_002216011.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 196621 197430 . - . ID=gene-YPIP275_RS04920;Name=YPIP275_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04920;old_locus_tag=YPIP275_4203 NZ_AAOS02000004.1 Protein Homology CDS 196621 197430 . - 0 ID=cds-WP_002209424.1;Parent=gene-YPIP275_RS04920;Dbxref=GenBank:WP_002209424.1;Name=WP_002209424.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209424.1;locus_tag=YPIP275_RS04920;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_002209424.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 198133 198828 . + . ID=gene-YPIP275_RS04925;Name=YPIP275_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04925;old_locus_tag=YPIP275_4205 NZ_AAOS02000004.1 Protein Homology CDS 198133 198828 . + 0 ID=cds-WP_002209426.1;Parent=gene-YPIP275_RS04925;Dbxref=GenBank:WP_002209426.1;Name=WP_002209426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083158.1;locus_tag=YPIP275_RS04925;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002209426.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 199291 201741 . + . ID=gene-YPIP275_RS04930;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=YPIP275_RS04930;old_locus_tag=YPIP275_4206 NZ_AAOS02000004.1 Protein Homology CDS 199291 201741 . + 0 ID=cds-WP_002209427.1;Parent=gene-YPIP275_RS04930;Dbxref=GenBank:WP_002209427.1;Name=WP_002209427.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080377.1;locus_tag=YPIP275_RS04930;product=dimethylsulfoxide reductase subunit A;protein_id=WP_002209427.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 201753 202370 . + . ID=gene-YPIP275_RS04935;Name=YPIP275_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04935;old_locus_tag=YPIP275_4207 NZ_AAOS02000004.1 Protein Homology CDS 201753 202370 . + 0 ID=cds-WP_002209428.1;Parent=gene-YPIP275_RS04935;Dbxref=GenBank:WP_002209428.1;Name=WP_002209428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=YPIP275_RS04935;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_002209428.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 202372 203232 . + . ID=gene-YPIP275_RS04940;Name=YPIP275_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04940;old_locus_tag=YPIP275_4208 NZ_AAOS02000004.1 Protein Homology CDS 202372 203232 . + 0 ID=cds-WP_002209429.1;Parent=gene-YPIP275_RS04940;Dbxref=GenBank:WP_002209429.1;Name=WP_002209429.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209429.1;locus_tag=YPIP275_RS04940;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_002209429.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 203378 204088 . + . ID=gene-YPIP275_RS04945;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=YPIP275_RS04945;old_locus_tag=YPIP275_4209 NZ_AAOS02000004.1 Protein Homology CDS 203378 204088 . + 0 ID=cds-WP_002209430.1;Parent=gene-YPIP275_RS04945;Dbxref=GenBank:WP_002209430.1;Name=WP_002209430.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209430.1;locus_tag=YPIP275_RS04945;product=Tat proofreading chaperone DmsD;protein_id=WP_002209430.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 204345 204875 . - . ID=gene-YPIP275_RS04950;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=YPIP275_RS04950;old_locus_tag=YPIP275_4210 NZ_AAOS02000004.1 Protein Homology CDS 204345 204875 . - 0 ID=cds-WP_002215100.1;Parent=gene-YPIP275_RS04950;Dbxref=GenBank:WP_002215100.1;Name=WP_002215100.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191798.1;locus_tag=YPIP275_RS04950;product=cytochrome b561;protein_id=WP_002215100.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 205023 205406 . - . ID=gene-YPIP275_RS04955;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=YPIP275_RS04955;old_locus_tag=YPIP275_4211 NZ_AAOS02000004.1 Protein Homology CDS 205023 205406 . - 0 ID=cds-WP_002215101.1;Parent=gene-YPIP275_RS04955;Dbxref=GenBank:WP_002215101.1;Name=WP_002215101.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191799.1;locus_tag=YPIP275_RS04955;product=cytochrome b562;protein_id=WP_002215101.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 205483 207696 . - . ID=gene-YPIP275_RS04960;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=YPIP275_RS04960;old_locus_tag=YPIP275_4212 NZ_AAOS02000004.1 Protein Homology CDS 205483 207696 . - 0 ID=cds-WP_002209433.1;Parent=gene-YPIP275_RS04960;Dbxref=GenBank:WP_002209433.1;Name=WP_002209433.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209433.1;locus_tag=YPIP275_RS04960;product=catalase/peroxidase HPI;protein_id=WP_002209433.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 208232 209173 . + . ID=gene-YPIP275_RS04965;Name=YPIP275_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04965;old_locus_tag=YPIP275_4213 NZ_AAOS02000004.1 Protein Homology CDS 208232 209173 . + 0 ID=cds-WP_002209434.1;Parent=gene-YPIP275_RS04965;Dbxref=GenBank:WP_002209434.1;Name=WP_002209434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191800.1;locus_tag=YPIP275_RS04965;product=D-ribose ABC transporter substrate-binding protein;protein_id=WP_002209434.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 209266 209883 . + . ID=gene-YPIP275_RS04970;Name=YPIP275_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04970;old_locus_tag=YPIP275_4214 NZ_AAOS02000004.1 Protein Homology CDS 209266 209883 . + 0 ID=cds-WP_002209435.1;Parent=gene-YPIP275_RS04970;Dbxref=GenBank:WP_002209435.1;Name=WP_002209435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209435.1;locus_tag=YPIP275_RS04970;product=DUF2291 family protein;protein_id=WP_002209435.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 209883 211406 . + . ID=gene-YPIP275_RS04975;Name=YPIP275_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04975;old_locus_tag=YPIP275_4215 NZ_AAOS02000004.1 Protein Homology CDS 209883 211406 . + 0 ID=cds-WP_002209436.1;Parent=gene-YPIP275_RS04975;Dbxref=GenBank:WP_002209436.1;Name=WP_002209436.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229166.1;locus_tag=YPIP275_RS04975;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002209436.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 211406 212548 . + . ID=gene-YPIP275_RS04980;Name=YPIP275_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04980;old_locus_tag=YPIP275_4216 NZ_AAOS02000004.1 Protein Homology CDS 211406 212548 . + 0 ID=cds-WP_002354764.1;Parent=gene-YPIP275_RS04980;Dbxref=GenBank:WP_002354764.1;Name=WP_002354764.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354764.1;locus_tag=YPIP275_RS04980;product=ABC transporter permease;protein_id=WP_002354764.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 212804 213634 . + . ID=gene-YPIP275_RS04985;Name=YPIP275_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04985;old_locus_tag=YPIP275_4217 NZ_AAOS02000004.1 Protein Homology CDS 212804 213634 . + 0 ID=cds-WP_002209438.1;Parent=gene-YPIP275_RS04985;Dbxref=GenBank:WP_002209438.1;Name=WP_002209438.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130310.1;locus_tag=YPIP275_RS04985;product=transketolase;protein_id=WP_002209438.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 213627 214571 . + . ID=gene-YPIP275_RS04990;Name=YPIP275_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04990;old_locus_tag=YPIP275_4218 NZ_AAOS02000004.1 Protein Homology CDS 213627 214571 . + 0 ID=cds-WP_002209439.1;Parent=gene-YPIP275_RS04990;Dbxref=GenBank:WP_002209439.1;Name=WP_002209439.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080366.1;locus_tag=YPIP275_RS04990;product=transketolase family protein;protein_id=WP_002209439.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 214574 216061 . + . ID=gene-YPIP275_RS04995;Name=YPIP275_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04995;old_locus_tag=YPIP275_4219 NZ_AAOS02000004.1 Protein Homology CDS 214574 216061 . + 0 ID=cds-WP_002209440.1;Parent=gene-YPIP275_RS04995;Dbxref=GenBank:WP_002209440.1;Name=WP_002209440.1;Ontology_term=GO:0005975,GO:0006072,GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycerol-3-phosphate metabolic process|0006072||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209440.1;locus_tag=YPIP275_RS04995;product=FGGY family carbohydrate kinase;protein_id=WP_002209440.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 216082 217506 . + . ID=gene-YPIP275_RS05000;Name=YPIP275_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05000;old_locus_tag=YPIP275_4221 NZ_AAOS02000004.1 Protein Homology CDS 216082 217506 . + 0 ID=cds-WP_002209441.1;Parent=gene-YPIP275_RS05000;Dbxref=GenBank:WP_002209441.1;Name=WP_002209441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209441.1;locus_tag=YPIP275_RS05000;product=L-fucose/L-arabinose isomerase family protein;protein_id=WP_002209441.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 217728 218672 . - . ID=gene-YPIP275_RS05005;Name=YPIP275_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05005;old_locus_tag=YPIP275_4222 NZ_AAOS02000004.1 Protein Homology CDS 217728 218672 . - 0 ID=cds-WP_002209443.1;Parent=gene-YPIP275_RS05005;Dbxref=GenBank:WP_002209443.1;Name=WP_002209443.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209443.1;locus_tag=YPIP275_RS05005;product=sugar-binding transcriptional regulator;protein_id=WP_002209443.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 218920 220260 . - . ID=gene-YPIP275_RS05010;Name=YPIP275_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05010;old_locus_tag=YPIP275_4223 NZ_AAOS02000004.1 Protein Homology CDS 218920 220260 . - 0 ID=cds-WP_002209444.1;Parent=gene-YPIP275_RS05010;Dbxref=GenBank:WP_002209444.1;Name=WP_002209444.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209444.1;locus_tag=YPIP275_RS05010;product=MFS transporter;protein_id=WP_002209444.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 220577 221065 . + . ID=gene-YPIP275_RS05015;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=YPIP275_RS05015;old_locus_tag=YPIP275_4224 NZ_AAOS02000004.1 Protein Homology CDS 220577 221065 . + 0 ID=cds-WP_002209445.1;Parent=gene-YPIP275_RS05015;Dbxref=GenBank:WP_002209445.1;Name=WP_002209445.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209445.1;locus_tag=YPIP275_RS05015;product=nicotinamide-nucleotide amidase;protein_id=WP_002209445.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 221180 222250 . + . ID=gene-YPIP275_RS05020;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05020;old_locus_tag=YPIP275_4225 NZ_AAOS02000004.1 Protein Homology CDS 221180 222250 . + 0 ID=cds-WP_002209446.1;Parent=gene-YPIP275_RS05020;Dbxref=GenBank:WP_002209446.1;Name=WP_002209446.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209446.1;locus_tag=YPIP275_RS05020;product=recombinase RecA;protein_id=WP_002209446.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 222388 222951 . + . ID=gene-YPIP275_RS05025;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=YPIP275_RS05025;old_locus_tag=YPIP275_4226 NZ_AAOS02000004.1 Protein Homology CDS 222388 222951 . + 0 ID=cds-WP_002209447.1;Parent=gene-YPIP275_RS05025;Dbxref=GenBank:WP_002209447.1;Name=WP_002209447.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209447.1;locus_tag=YPIP275_RS05025;product=recombination regulator RecX;protein_id=WP_002209447.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 223091 225718 . + . ID=gene-YPIP275_RS05030;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=YPIP275_RS05030;old_locus_tag=YPIP275_4227 NZ_AAOS02000004.1 Protein Homology CDS 223091 225718 . + 0 ID=cds-WP_002209448.1;Parent=gene-YPIP275_RS05030;Dbxref=GenBank:WP_002209448.1;Name=WP_002209448.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209448.1;locus_tag=YPIP275_RS05030;product=alanine--tRNA ligase;protein_id=WP_002209448.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 225968 226153 . + . ID=gene-YPIP275_RS05035;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05035;old_locus_tag=YPIP275_4228 NZ_AAOS02000004.1 Protein Homology CDS 225968 226153 . + 0 ID=cds-WP_002209449.1;Parent=gene-YPIP275_RS05035;Dbxref=GenBank:WP_002209449.1;Name=WP_002209449.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155916.1;locus_tag=YPIP275_RS05035;product=carbon storage regulator CsrA;protein_id=WP_002209449.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 226516 226608 . + . ID=gene-YPIP275_RS05040;Name=YPIP275_RS05040;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS05040;old_locus_tag=YPIP275_4229 NZ_AAOS02000004.1 tRNAscan-SE tRNA 226516 226608 . + . ID=rna-YPIP275_RS05040;Parent=gene-YPIP275_RS05040;anticodon=(pos:226550..226552);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS05040;product=tRNA-Ser NZ_AAOS02000004.1 tRNAscan-SE exon 226516 226608 . + . ID=exon-YPIP275_RS05040-1;Parent=rna-YPIP275_RS05040;anticodon=(pos:226550..226552);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS05040;product=tRNA-Ser NZ_AAOS02000004.1 RefSeq gene 226617 226693 . + . ID=gene-YPIP275_RS05045;Name=YPIP275_RS05045;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS05045;old_locus_tag=YPIP275_4230 NZ_AAOS02000004.1 tRNAscan-SE tRNA 226617 226693 . + . ID=rna-YPIP275_RS05045;Parent=gene-YPIP275_RS05045;anticodon=(pos:226651..226653);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS05045;product=tRNA-Arg NZ_AAOS02000004.1 tRNAscan-SE exon 226617 226693 . + . ID=exon-YPIP275_RS05045-1;Parent=rna-YPIP275_RS05045;anticodon=(pos:226651..226653);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS05045;product=tRNA-Arg NZ_AAOS02000004.1 RefSeq gene 226751 226827 . + . ID=gene-YPIP275_RS05050;Name=YPIP275_RS05050;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS05050;old_locus_tag=YPIP275_4231 NZ_AAOS02000004.1 tRNAscan-SE tRNA 226751 226827 . + . ID=rna-YPIP275_RS05050;Parent=gene-YPIP275_RS05050;anticodon=(pos:226785..226787);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS05050;product=tRNA-Arg NZ_AAOS02000004.1 tRNAscan-SE exon 226751 226827 . + . ID=exon-YPIP275_RS05050-1;Parent=rna-YPIP275_RS05050;anticodon=(pos:226785..226787);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS05050;product=tRNA-Arg NZ_AAOS02000004.1 RefSeq gene 226907 226983 . + . ID=gene-YPIP275_RS05055;Name=YPIP275_RS05055;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS05055;old_locus_tag=YPIP275_4232 NZ_AAOS02000004.1 tRNAscan-SE tRNA 226907 226983 . + . ID=rna-YPIP275_RS05055;Parent=gene-YPIP275_RS05055;anticodon=(pos:226941..226943);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS05055;product=tRNA-Arg NZ_AAOS02000004.1 tRNAscan-SE exon 226907 226983 . + . ID=exon-YPIP275_RS05055-1;Parent=rna-YPIP275_RS05055;anticodon=(pos:226941..226943);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS05055;product=tRNA-Arg NZ_AAOS02000004.1 RefSeq gene 227030 227155 . + . ID=gene-YPIP275_RS26885;Name=YPIP275_RS26885;gbkey=Gene;gene_biotype=ncRNA;locus_tag=YPIP275_RS26885 NZ_AAOS02000004.1 cmsearch ncRNA 227030 227155 . + . ID=rna-YPIP275_RS26885;Parent=gene-YPIP275_RS26885;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS26885;product=RtT sRNA NZ_AAOS02000004.1 cmsearch exon 227030 227155 . + . ID=exon-YPIP275_RS26885-1;Parent=rna-YPIP275_RS26885;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS26885;product=RtT sRNA NZ_AAOS02000004.1 RefSeq gene 227202 227327 . + . ID=gene-YPIP275_RS26890;Name=YPIP275_RS26890;gbkey=Gene;gene_biotype=ncRNA;locus_tag=YPIP275_RS26890 NZ_AAOS02000004.1 cmsearch ncRNA 227202 227327 . + . ID=rna-YPIP275_RS26890;Parent=gene-YPIP275_RS26890;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS26890;product=RtT sRNA NZ_AAOS02000004.1 cmsearch exon 227202 227327 . + . ID=exon-YPIP275_RS26890-1;Parent=rna-YPIP275_RS26890;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS26890;product=RtT sRNA NZ_AAOS02000004.1 RefSeq gene 227578 228144 . + . ID=gene-YPIP275_RS05060;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=YPIP275_RS05060;old_locus_tag=YPIP275_4233 NZ_AAOS02000004.1 Protein Homology CDS 227578 228144 . + 0 ID=cds-WP_002209450.1;Parent=gene-YPIP275_RS05060;Dbxref=GenBank:WP_002209450.1;Name=WP_002209450.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278443.1;locus_tag=YPIP275_RS05060;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_002209450.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 228141 228569 . + . ID=gene-YPIP275_RS05065;Name=YPIP275_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05065;old_locus_tag=YPIP275_4234 NZ_AAOS02000004.1 Protein Homology CDS 228141 228569 . + 0 ID=cds-WP_002209451.1;Parent=gene-YPIP275_RS05065;Dbxref=GenBank:WP_002209451.1;Name=WP_002209451.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209451.1;locus_tag=YPIP275_RS05065;product=YqaA family protein;protein_id=WP_002209451.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 228613 230211 . + . ID=gene-YPIP275_RS05070;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05070;old_locus_tag=YPIP275_4235 NZ_AAOS02000004.1 Protein Homology CDS 228613 230211 . + 0 ID=cds-WP_002209452.1;Parent=gene-YPIP275_RS05070;Dbxref=GenBank:WP_002209452.1;Name=WP_002209452.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209452.1;locus_tag=YPIP275_RS05070;product=glutamate--cysteine ligase;protein_id=WP_002209452.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 230379 230894 . + . ID=gene-YPIP275_RS05075;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=YPIP275_RS05075;old_locus_tag=YPIP275_4236 NZ_AAOS02000004.1 Protein Homology CDS 230379 230894 . + 0 ID=cds-WP_002209453.1;Parent=gene-YPIP275_RS05075;Dbxref=GenBank:WP_002209453.1;Name=WP_002209453.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417172.1;locus_tag=YPIP275_RS05075;product=S-ribosylhomocysteine lyase;protein_id=WP_002209453.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 231098 231556 . + . ID=gene-YPIP275_RS05080;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05080;old_locus_tag=YPIP275_4237 NZ_AAOS02000004.1 Protein Homology CDS 231098 231556 . + 0 ID=cds-WP_002213775.1-35;Parent=gene-YPIP275_RS05080;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS05080;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 231809 232267 . + . ID=gene-YPIP275_RS05090;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05090;old_locus_tag=YPIP275_4238 NZ_AAOS02000004.1 Protein Homology CDS 231809 232267 . + 0 ID=cds-WP_002213759.1-27;Parent=gene-YPIP275_RS05090;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS05090;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 232405 233685 . - . ID=gene-YPIP275_RS05095;Name=YPIP275_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05095;old_locus_tag=YPIP275_4239 NZ_AAOS02000004.1 Protein Homology CDS 232405 233685 . - 0 ID=cds-WP_002354744.1;Parent=gene-YPIP275_RS05095;Dbxref=GenBank:WP_002354744.1;Name=WP_002354744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354744.1;locus_tag=YPIP275_RS05095;product=HlyC/CorC family transporter;protein_id=WP_002354744.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 233757 234548 . - . ID=gene-YPIP275_RS05100;Name=YPIP275_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05100;old_locus_tag=YPIP275_4240 NZ_AAOS02000004.1 Protein Homology CDS 233757 234548 . - 0 ID=cds-WP_002209455.1;Parent=gene-YPIP275_RS05100;Dbxref=GenBank:WP_002209455.1;Name=WP_002209455.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671002.1;locus_tag=YPIP275_RS05100;product=cytochrome C assembly family protein;protein_id=WP_002209455.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 234714 236075 . + . ID=gene-YPIP275_RS05105;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=YPIP275_RS05105;old_locus_tag=YPIP275_4241 NZ_AAOS02000004.1 Protein Homology CDS 234714 236075 . + 0 ID=cds-WP_002209456.1;Parent=gene-YPIP275_RS05105;Dbxref=GenBank:WP_002209456.1;Name=WP_002209456.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence receptor activity|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=YPIP275_RS05105;product=signal recognition particle protein;protein_id=WP_002209456.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 236303 236551 . + . ID=gene-YPIP275_RS05110;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=YPIP275_RS05110;old_locus_tag=YPIP275_4243 NZ_AAOS02000004.1 Protein Homology CDS 236303 236551 . + 0 ID=cds-WP_002209458.1;Parent=gene-YPIP275_RS05110;Dbxref=GenBank:WP_002209458.1;Name=WP_002209458.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209458.1;locus_tag=YPIP275_RS05110;product=30S ribosomal protein S16;protein_id=WP_002209458.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 236573 237121 . + . ID=gene-YPIP275_RS05115;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=YPIP275_RS05115;old_locus_tag=YPIP275_4244 NZ_AAOS02000004.1 Protein Homology CDS 236573 237121 . + 0 ID=cds-WP_002209459.1;Parent=gene-YPIP275_RS05115;Dbxref=GenBank:WP_002209459.1;Name=WP_002209459.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191812.1;locus_tag=YPIP275_RS05115;product=ribosome maturation factor RimM;protein_id=WP_002209459.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 237160 237900 . + . ID=gene-YPIP275_RS05120;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=YPIP275_RS05120;old_locus_tag=YPIP275_4245 NZ_AAOS02000004.1 Protein Homology CDS 237160 237900 . + 0 ID=cds-WP_002222284.1;Parent=gene-YPIP275_RS05120;Dbxref=GenBank:WP_002222284.1;Name=WP_002222284.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393426.1;locus_tag=YPIP275_RS05120;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_002222284.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 237981 238328 . + . ID=gene-YPIP275_RS05125;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=YPIP275_RS05125;old_locus_tag=YPIP275_4246 NZ_AAOS02000004.1 Protein Homology CDS 237981 238328 . + 0 ID=cds-WP_002209461.1;Parent=gene-YPIP275_RS05125;Dbxref=GenBank:WP_002209461.1;Name=WP_002209461.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155938.1;locus_tag=YPIP275_RS05125;product=50S ribosomal protein L19;protein_id=WP_002209461.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 238540 238998 . + . ID=gene-YPIP275_RS05135;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05135;old_locus_tag=YPIP275_4247 NZ_AAOS02000004.1 Protein Homology CDS 238540 238998 . + 0 ID=cds-WP_002213759.1-28;Parent=gene-YPIP275_RS05135;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS05135;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 239301 240068 . - . ID=gene-YPIP275_RS05140;Name=YPIP275_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05140;old_locus_tag=YPIP275_4248 NZ_AAOS02000004.1 Protein Homology CDS 239301 240068 . - 0 ID=cds-WP_002209462.1;Parent=gene-YPIP275_RS05140;Dbxref=GenBank:WP_002209462.1;Name=WP_002209462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716690.1;locus_tag=YPIP275_RS05140;product=DUF481 domain-containing protein;protein_id=WP_002209462.1;transl_table=11 NZ_AAOS02000004.1 RefSeq pseudogene 240391 241735 . - . ID=gene-YPIP275_RS26900;Name=YPIP275_RS26900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS26900;pseudo=true NZ_AAOS02000004.1 Protein Homology CDS 240391 241735 . - 0 ID=cds-YPIP275_RS26900;Parent=gene-YPIP275_RS26900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105614.1;locus_tag=YPIP275_RS26900;product=anaerobic C4-dicarboxylate transporter;pseudo=true;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 242164 242880 . - . ID=gene-YPIP275_RS05160;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=YPIP275_RS05160;old_locus_tag=YPIP275_4251 NZ_AAOS02000004.1 Protein Homology CDS 242164 242880 . - 0 ID=cds-WP_002209463.1;Parent=gene-YPIP275_RS05160;Dbxref=GenBank:WP_002209463.1;Name=WP_002209463.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105613.1;locus_tag=YPIP275_RS05160;product=two-component system response regulator BtsR;protein_id=WP_002209463.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 243113 244183 . + . ID=gene-YPIP275_RS05165;Name=YPIP275_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS05165;old_locus_tag=YPIP275_4252 NZ_AAOS02000004.1 Protein Homology CDS 243113 244183 . + 0 ID=cds-WP_002228238.1;Parent=gene-YPIP275_RS05165;Dbxref=GenBank:WP_002228238.1;Name=WP_002228238.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228238.1;locus_tag=YPIP275_RS05165;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_002228238.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 244196 245317 . + . ID=gene-YPIP275_RS05170;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05170;old_locus_tag=YPIP275_4253 NZ_AAOS02000004.1 Protein Homology CDS 244196 245317 . + 0 ID=cds-WP_002209465.1;Parent=gene-YPIP275_RS05170;Dbxref=GenBank:WP_002209465.1;Name=WP_002209465.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=L-tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311490.1;locus_tag=YPIP275_RS05170;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_002209465.1;transl_table=11 NZ_AAOS02000004.1 RefSeq pseudogene 245422 245649 . - . ID=gene-YPIP275_RS05175;Name=pheA;end_range=245649,.;gbkey=Gene;gene=pheA;gene_biotype=pseudogene;locus_tag=YPIP275_RS05175;old_locus_tag=YPIP275_4254;partial=true;pseudo=true NZ_AAOS02000004.1 Protein Homology CDS 245422 245649 . - 0 ID=cds-YPIP275_RS05175;Parent=gene-YPIP275_RS05175;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=245649,.;gbkey=CDS;gene=pheA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228330.1;locus_tag=YPIP275_RS05175;partial=true;product=bifunctional chorismate mutase/prephenate dehydratase;pseudo=true;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 245717 246499 . - . ID=gene-YPIP275_RS05180;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS05180;old_locus_tag=YPIP275_4255 NZ_AAOS02000004.1 Protein Homology CDS 245717 246499 . - 0 ID=cds-WP_001317493.1-43;Parent=gene-YPIP275_RS05180;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS05180;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 246496 247518 . - . ID=gene-YPIP275_RS05185;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05185;old_locus_tag=YPIP275_4256 NZ_AAOS02000004.1 Protein Homology CDS 246496 247518 . - 0 ID=cds-WP_000255944.1-37;Parent=gene-YPIP275_RS05185;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS05185;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000004.1 RefSeq pseudogene 247606 248538 . - . ID=gene-YPIP275_RS05190;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=pseudogene;locus_tag=YPIP275_RS05190;old_locus_tag=YPIP275_4257;partial=true;pseudo=true;start_range=.,247606 NZ_AAOS02000004.1 Protein Homology CDS 247606 248538 . - 0 ID=cds-YPIP275_RS05190;Parent=gene-YPIP275_RS05190;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016929014.1;locus_tag=YPIP275_RS05190;partial=true;product=bifunctional chorismate mutase/prephenate dehydratase;pseudo=true;start_range=.,247606;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 248821 249279 . + . ID=gene-YPIP275_RS05195;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05195;old_locus_tag=YPIP275_4258 NZ_AAOS02000004.1 Protein Homology CDS 248821 249279 . + 0 ID=cds-WP_002213775.1-36;Parent=gene-YPIP275_RS05195;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS05195;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000004.1 cmsearch sequence_feature 249350 249476 . - . ID=id-NZ_AAOS02000004.1:249350..249476;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_AAOS02000004.1 RefSeq gene 249610 249972 . - . ID=gene-YPIP275_RS05200;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=YPIP275_RS05200;old_locus_tag=YPIP275_4259 NZ_AAOS02000004.1 Protein Homology CDS 249610 249972 . - 0 ID=cds-WP_002209468.1;Parent=gene-YPIP275_RS05200;Dbxref=GenBank:WP_002209468.1;Name=WP_002209468.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413503.1;locus_tag=YPIP275_RS05200;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_002209468.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 250327 251058 . - . ID=gene-YPIP275_RS05205;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=YPIP275_RS05205;old_locus_tag=YPIP275_4260 NZ_AAOS02000004.1 Protein Homology CDS 250327 251058 . - 0 ID=cds-WP_002209469.1;Parent=gene-YPIP275_RS05205;Dbxref=GenBank:WP_002209469.1;Name=WP_002209469.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004723105.1;locus_tag=YPIP275_RS05205;product=outer membrane protein assembly factor BamD;protein_id=WP_002209469.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 251194 252171 . + . ID=gene-YPIP275_RS05210;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=YPIP275_RS05210;old_locus_tag=YPIP275_4261 NZ_AAOS02000004.1 Protein Homology CDS 251194 252171 . + 0 ID=cds-WP_002209470.1;Parent=gene-YPIP275_RS05210;Dbxref=GenBank:WP_002209470.1;Name=WP_002209470.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016603421.1;locus_tag=YPIP275_RS05210;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_002209470.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 252173 252904 . + . ID=gene-YPIP275_RS05215;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=YPIP275_RS05215;old_locus_tag=YPIP275_4262 NZ_AAOS02000004.1 Protein Homology CDS 252173 252904 . + 0 ID=cds-WP_002209471.1;Parent=gene-YPIP275_RS05215;Dbxref=GenBank:WP_002209471.1;Name=WP_002209471.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209471.1;locus_tag=YPIP275_RS05215;product=purine nucleoside phosphorylase YfiH;protein_id=WP_002209471.1;transl_table=11 NZ_AAOS02000004.1 RefSeq gene 253034 255607 . + . ID=gene-YPIP275_RS05220;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=YPIP275_RS05220;old_locus_tag=YPIP275_4263 NZ_AAOS02000004.1 Protein Homology CDS 253034 255607 . + 0 ID=cds-WP_002217405.1;Parent=gene-YPIP275_RS05220;Dbxref=GenBank:WP_002217405.1;Name=WP_002217405.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=YPIP275_RS05220;product=ATP-dependent chaperone ClpB;protein_id=WP_002217405.1;transl_table=11 ##sequence-region NZ_AAOS02000003.1 1 268581 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000003.1 RefSeq region 1 268581 . + . ID=NZ_AAOS02000003.1:1..268581;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000003.1 RefSeq gene 1 398 . + . ID=gene-YPIP275_RS02800;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=YPIP275_RS02800;old_locus_tag=YPIP275_3172;partial=true;start_range=.,1 NZ_AAOS02000003.1 Protein Homology CDS 1 398 . + 2 ID=cds-WP_002209012.1;Parent=gene-YPIP275_RS02800;Dbxref=GenBank:WP_002209012.1;Name=WP_002209012.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=YPIP275_RS02800;partial=true;product=30S ribosomal protein S4;protein_id=WP_002209012.1;start_range=.,1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 424 1413 . + . ID=gene-YPIP275_RS02805;Name=YPIP275_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02805;old_locus_tag=YPIP275_3173 NZ_AAOS02000003.1 Protein Homology CDS 424 1413 . + 0 ID=cds-WP_002209013.1;Parent=gene-YPIP275_RS02805;Dbxref=GenBank:WP_002209013.1;Name=WP_002209013.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=YPIP275_RS02805;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002209013.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 1454 1843 . + . ID=gene-YPIP275_RS02810;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS02810;old_locus_tag=YPIP275_3174 NZ_AAOS02000003.1 Protein Homology CDS 1454 1843 . + 0 ID=cds-WP_002209014.1;Parent=gene-YPIP275_RS02810;Dbxref=GenBank:WP_002209014.1;Name=WP_002209014.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013573706.1;locus_tag=YPIP275_RS02810;product=50S ribosomal protein L17;protein_id=WP_002209014.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 2290 2715 . + . ID=gene-YPIP275_RS02815;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=YPIP275_RS02815;old_locus_tag=YPIP275_3175 NZ_AAOS02000003.1 Protein Homology CDS 2290 2715 . + 0 ID=cds-WP_002215702.1;Parent=gene-YPIP275_RS02815;Dbxref=GenBank:WP_002215702.1;Name=WP_002215702.1;Ontology_term=GO:0006351,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215702.1;locus_tag=YPIP275_RS02815;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_002215702.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 2803 3003 . + . ID=gene-YPIP275_RS02820;Name=YPIP275_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02820;old_locus_tag=YPIP275_3176 NZ_AAOS02000003.1 Protein Homology CDS 2803 3003 . + 0 ID=cds-WP_002209016.1;Parent=gene-YPIP275_RS02820;Dbxref=GenBank:WP_002209016.1;Name=WP_002209016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209016.1;locus_tag=YPIP275_RS02820;product=alternative ribosome-rescue factor A;protein_id=WP_002209016.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 3113 3526 . - . ID=gene-YPIP275_RS02825;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=YPIP275_RS02825;old_locus_tag=YPIP275_3177 NZ_AAOS02000003.1 Protein Homology CDS 3113 3526 . - 0 ID=cds-WP_002209017.1;Parent=gene-YPIP275_RS02825;Dbxref=GenBank:WP_002209017.1;Name=WP_002209017.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209017.1;locus_tag=YPIP275_RS02825;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_002209017.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 3665 5041 . - . ID=gene-YPIP275_RS02830;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02830;old_locus_tag=YPIP275_3178 NZ_AAOS02000003.1 Protein Homology CDS 3665 5041 . - 0 ID=cds-WP_002209018.1;Parent=gene-YPIP275_RS02830;Dbxref=GenBank:WP_002209018.1;Name=WP_002209018.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=YPIP275_RS02830;product=Trk system potassium transporter TrkA;protein_id=WP_002209018.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 5097 6386 . - . ID=gene-YPIP275_RS02835;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=YPIP275_RS02835;old_locus_tag=YPIP275_3179 NZ_AAOS02000003.1 Protein Homology CDS 5097 6386 . - 0 ID=cds-WP_002215705.1;Parent=gene-YPIP275_RS02835;Dbxref=GenBank:WP_002215705.1;Name=WP_002215705.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041854762.1;locus_tag=YPIP275_RS02835;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_002215705.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 6480 7427 . - . ID=gene-YPIP275_RS02840;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=YPIP275_RS02840;old_locus_tag=YPIP275_3180 NZ_AAOS02000003.1 Protein Homology CDS 6480 7427 . - 0 ID=cds-WP_002209020.1;Parent=gene-YPIP275_RS02840;Dbxref=GenBank:WP_002209020.1;Name=WP_002209020.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209020.1;locus_tag=YPIP275_RS02840;product=methionyl-tRNA formyltransferase;protein_id=WP_002209020.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 7452 7964 . - . ID=gene-YPIP275_RS02845;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=YPIP275_RS02845;old_locus_tag=YPIP275_3181 NZ_AAOS02000003.1 Protein Homology CDS 7452 7964 . - 0 ID=cds-WP_002209021.1;Parent=gene-YPIP275_RS02845;Dbxref=GenBank:WP_002209021.1;Name=WP_002209021.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709217.1;locus_tag=YPIP275_RS02845;product=peptide deformylase;protein_id=WP_002209021.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 8099 9220 . + . ID=gene-YPIP275_RS02850;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02850;old_locus_tag=YPIP275_3182 NZ_AAOS02000003.1 Protein Homology CDS 8099 9220 . + 0 ID=cds-WP_002209022.1;Parent=gene-YPIP275_RS02850;Dbxref=GenBank:WP_002209022.1;Name=WP_002209022.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193215.1;locus_tag=YPIP275_RS02850;product=DNA-protecting protein DprA;protein_id=WP_002209022.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 9192 9665 . + . ID=gene-YPIP275_RS02855;Name=YPIP275_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02855;old_locus_tag=YPIP275_3183 NZ_AAOS02000003.1 Protein Homology CDS 9192 9665 . + 0 ID=cds-WP_002209023.1;Parent=gene-YPIP275_RS02855;Dbxref=GenBank:WP_002209023.1;Name=WP_002209023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=YPIP275_RS02855;product=DUF494 family protein;protein_id=WP_002209023.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 9706 10245 . + . ID=gene-YPIP275_RS02860;Name=YPIP275_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02860;old_locus_tag=YPIP275_3184 NZ_AAOS02000003.1 Protein Homology CDS 9706 10245 . + 0 ID=cds-WP_002228134.1;Parent=gene-YPIP275_RS02860;Dbxref=GenBank:WP_002228134.1;Name=WP_002228134.1;Ontology_term=GO:0006265,GO:0003677,GO:0003917;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228134.1;locus_tag=YPIP275_RS02860;product=DNA topoisomerase family protein;protein_id=WP_002228134.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 10247 10819 . + . ID=gene-YPIP275_RS02865;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=YPIP275_RS02865;old_locus_tag=YPIP275_3185 NZ_AAOS02000003.1 Protein Homology CDS 10247 10819 . + 0 ID=cds-WP_002209025.1;Parent=gene-YPIP275_RS02865;Dbxref=GenBank:WP_002209025.1;Name=WP_002209025.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209025.1;locus_tag=YPIP275_RS02865;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_002209025.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 10828 11649 . + . ID=gene-YPIP275_RS02870;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=YPIP275_RS02870;old_locus_tag=YPIP275_3186 NZ_AAOS02000003.1 Protein Homology CDS 10828 11649 . + 0 ID=cds-WP_002209026.1;Parent=gene-YPIP275_RS02870;Dbxref=GenBank:WP_002209026.1;Name=WP_002209026.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209026.1;locus_tag=YPIP275_RS02870;product=shikimate dehydrogenase;protein_id=WP_002209026.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 11704 12189 . - . ID=gene-YPIP275_RS02875;Name=YPIP275_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02875;old_locus_tag=YPIP275_3187 NZ_AAOS02000003.1 Protein Homology CDS 11704 12189 . - 0 ID=cds-WP_002215709.1;Parent=gene-YPIP275_RS02875;Dbxref=GenBank:WP_002215709.1;Name=WP_002215709.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716360.1;locus_tag=YPIP275_RS02875;product=gamma carbonic anhydrase family protein;protein_id=WP_002215709.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 12301 13083 . - . ID=gene-YPIP275_RS02880;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS02880;old_locus_tag=YPIP275_3188 NZ_AAOS02000003.1 Protein Homology CDS 12301 13083 . - 0 ID=cds-WP_001317493.1-44;Parent=gene-YPIP275_RS02880;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS02880;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 13080 14102 . - . ID=gene-YPIP275_RS02885;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02885;old_locus_tag=YPIP275_3189 NZ_AAOS02000003.1 Protein Homology CDS 13080 14102 . - 0 ID=cds-WP_000255944.1-38;Parent=gene-YPIP275_RS02885;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS02885;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 14161 15147 . + . ID=gene-YPIP275_RS02890;Name=YPIP275_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02890;old_locus_tag=YPIP275_3190 NZ_AAOS02000003.1 Protein Homology CDS 14161 15147 . + 0 ID=cds-WP_002209028.1;Parent=gene-YPIP275_RS02890;Dbxref=GenBank:WP_002209028.1;Name=WP_002209028.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209028.1;locus_tag=YPIP275_RS02890;product=dienelactone hydrolase family protein;protein_id=WP_002209028.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 15221 16876 . - . ID=gene-YPIP275_RS02895;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=YPIP275_RS02895;old_locus_tag=YPIP275_3191 NZ_AAOS02000003.1 Protein Homology CDS 15221 16876 . - 0 ID=cds-WP_002209029.1;Parent=gene-YPIP275_RS02895;Dbxref=GenBank:WP_002209029.1;Name=WP_002209029.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209029.1;locus_tag=YPIP275_RS02895;product=cation/acetate symporter ActP;protein_id=WP_002209029.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 16873 17184 . - . ID=gene-YPIP275_RS02900;Name=YPIP275_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02900;old_locus_tag=YPIP275_3192 NZ_AAOS02000003.1 Protein Homology CDS 16873 17184 . - 0 ID=cds-WP_002209030.1;Parent=gene-YPIP275_RS02900;Dbxref=GenBank:WP_002209030.1;Name=WP_002209030.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209030.1;locus_tag=YPIP275_RS02900;product=DUF485 domain-containing protein;protein_id=WP_002209030.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 17241 19199 . - . ID=gene-YPIP275_RS02905;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=YPIP275_RS02905;old_locus_tag=YPIP275_3193 NZ_AAOS02000003.1 Protein Homology CDS 17241 19199 . - 0 ID=cds-WP_002209031.1;Parent=gene-YPIP275_RS02905;Dbxref=GenBank:WP_002209031.1;Name=WP_002209031.1;Ontology_term=GO:0006085,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetyl-CoA synthetase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004764.1;locus_tag=YPIP275_RS02905;product=acetate--CoA ligase;protein_id=WP_002209031.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 20054 21370 . + . ID=gene-YPIP275_RS02910;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=YPIP275_RS02910;old_locus_tag=YPIP275_3195 NZ_AAOS02000003.1 Protein Homology CDS 20054 21370 . + 0 ID=cds-WP_002209033.1;Parent=gene-YPIP275_RS02910;Dbxref=GenBank:WP_002209033.1;Name=WP_002209033.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209033.1;locus_tag=YPIP275_RS02910;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_002209033.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 21548 22180 . - . ID=gene-YPIP275_RS02915;Name=YPIP275_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02915;old_locus_tag=YPIP275_3196 NZ_AAOS02000003.1 Protein Homology CDS 21548 22180 . - 0 ID=cds-WP_002209034.1;Parent=gene-YPIP275_RS02915;Dbxref=GenBank:WP_002209034.1;Name=WP_002209034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209034.1;locus_tag=YPIP275_RS02915;product=two component system response regulator;protein_id=WP_002209034.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 22193 25012 . - . ID=gene-YPIP275_RS02920;Name=YPIP275_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02920;old_locus_tag=YPIP275_3197 NZ_AAOS02000003.1 Protein Homology CDS 22193 25012 . - 0 ID=cds-WP_002209035.1;Parent=gene-YPIP275_RS02920;Dbxref=GenBank:WP_002209035.1;Name=WP_002209035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209035.1;locus_tag=YPIP275_RS02920;product=two component system sensor kinase;protein_id=WP_002209035.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 25238 26755 . + . ID=gene-YPIP275_RS02925;Name=YPIP275_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02925;old_locus_tag=YPIP275_3198 NZ_AAOS02000003.1 Protein Homology CDS 25238 26755 . + 0 ID=cds-WP_002209036.1;Parent=gene-YPIP275_RS02925;Dbxref=GenBank:WP_002209036.1;Name=WP_002209036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105856.1;locus_tag=YPIP275_RS02925;product=EscC/YscC/HrcC family type III secretion system outer membrane ring protein;protein_id=WP_002209036.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 26757 27971 . + . ID=gene-YPIP275_RS02930;Name=sctD;gbkey=Gene;gene=sctD;gene_biotype=protein_coding;locus_tag=YPIP275_RS02930;old_locus_tag=YPIP275_3199 NZ_AAOS02000003.1 Protein Homology CDS 26757 27971 . + 0 ID=cds-WP_002209037.1;Parent=gene-YPIP275_RS02930;Dbxref=GenBank:WP_002209037.1;Name=WP_002209037.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctD;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209037.1;locus_tag=YPIP275_RS02930;product=type III secretion system inner membrane ring subunit SctD;protein_id=WP_002209037.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 27990 28211 . + . ID=gene-YPIP275_RS02935;Name=YPIP275_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02935;old_locus_tag=YPIP275_3200 NZ_AAOS02000003.1 Protein Homology CDS 27990 28211 . + 0 ID=cds-WP_002209038.1;Parent=gene-YPIP275_RS02935;Dbxref=GenBank:WP_002209038.1;Name=WP_002209038.1;Ontology_term=GO:0030254;gbkey=CDS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209038.1;locus_tag=YPIP275_RS02935;product=EscE/YscE/SsaE family type III secretion system needle protein co-chaperone;protein_id=WP_002209038.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 28385 29005 . + . ID=gene-YPIP275_RS02940;Name=YPIP275_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02940;old_locus_tag=YPIP275_3202 NZ_AAOS02000003.1 Protein Homology CDS 28385 29005 . + 0 ID=cds-WP_002216326.1;Parent=gene-YPIP275_RS02940;Dbxref=GenBank:WP_002216326.1;Name=WP_002216326.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391768.1;locus_tag=YPIP275_RS02940;product=helix-turn-helix domain-containing protein;protein_id=WP_002216326.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 29015 29230 . + . ID=gene-YPIP275_RS02945;Name=sctF;gbkey=Gene;gene=sctF;gene_biotype=protein_coding;locus_tag=YPIP275_RS02945 NZ_AAOS02000003.1 Protein Homology CDS 29015 29230 . + 0 ID=cds-WP_002216328.1;Parent=gene-YPIP275_RS02945;Dbxref=GenBank:WP_002216328.1;Name=WP_002216328.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctF;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216328.1;locus_tag=YPIP275_RS02945;product=type III secretion system needle filament subunit SctF;protein_id=WP_002216328.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 29227 29475 . + . ID=gene-YPIP275_RS02950;Name=YPIP275_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02950;old_locus_tag=YPIP275_3203 NZ_AAOS02000003.1 Protein Homology CDS 29227 29475 . + 0 ID=cds-WP_002209040.1;Parent=gene-YPIP275_RS02950;Dbxref=GenBank:WP_002209040.1;Name=WP_002209040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209040.1;locus_tag=YPIP275_RS02950;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_002209040.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 29573 29824 . + . ID=gene-YPIP275_RS02955;Name=sctI;gbkey=Gene;gene=sctI;gene_biotype=protein_coding;locus_tag=YPIP275_RS02955;old_locus_tag=YPIP275_3204 NZ_AAOS02000003.1 Protein Homology CDS 29573 29824 . + 0 ID=cds-WP_002209041.1;Parent=gene-YPIP275_RS02955;Dbxref=GenBank:WP_002209041.1;Name=WP_002209041.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctI;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209041.1;locus_tag=YPIP275_RS02955;product=type III secretion system inner rod subunit SctI;protein_id=WP_002209041.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 29821 30552 . + . ID=gene-YPIP275_RS02960;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS02960;old_locus_tag=YPIP275_3205 NZ_AAOS02000003.1 Protein Homology CDS 29821 30552 . + 0 ID=cds-WP_002209042.1;Parent=gene-YPIP275_RS02960;Dbxref=GenBank:WP_002209042.1;Name=WP_002209042.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209042.1;locus_tag=YPIP275_RS02960;product=EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein SsaJ;protein_id=WP_002209042.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 30727 31320 . + . ID=gene-YPIP275_RS02965;Name=YPIP275_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02965;old_locus_tag=YPIP275_3206 NZ_AAOS02000003.1 Protein Homology CDS 30727 31320 . + 0 ID=cds-WP_002209043.1;Parent=gene-YPIP275_RS02965;Dbxref=GenBank:WP_002209043.1;Name=WP_002209043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413430.1;locus_tag=YPIP275_RS02965;product=type III secretion system domain-containing protein;protein_id=WP_002209043.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 31317 31964 . + . ID=gene-YPIP275_RS02970;Name=sctL;gbkey=Gene;gene=sctL;gene_biotype=protein_coding;locus_tag=YPIP275_RS02970;old_locus_tag=YPIP275_3207 NZ_AAOS02000003.1 Protein Homology CDS 31317 31964 . + 0 ID=cds-WP_002216333.1;Parent=gene-YPIP275_RS02970;Dbxref=GenBank:WP_002216333.1;Name=WP_002216333.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctL;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105853.1;locus_tag=YPIP275_RS02970;product=type III secretion system stator protein SctL;protein_id=WP_002216333.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 31957 34005 . + . ID=gene-YPIP275_RS02975;Name=YPIP275_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02975;old_locus_tag=YPIP275_3208 NZ_AAOS02000003.1 Protein Homology CDS 31957 34005 . + 0 ID=cds-WP_002209045.1;Parent=gene-YPIP275_RS02975;Dbxref=GenBank:WP_002209045.1;Name=WP_002209045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105852.1;locus_tag=YPIP275_RS02975;product=EscV/YscV/HrcV family type III secretion system export apparatus protein;protein_id=WP_002209045.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 33992 35329 . + . ID=gene-YPIP275_RS02980;Name=YPIP275_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02980;old_locus_tag=YPIP275_3209 NZ_AAOS02000003.1 Protein Homology CDS 33992 35329 . + 0 ID=cds-WP_002209046.1;Parent=gene-YPIP275_RS02980;Dbxref=GenBank:WP_002209046.1;Name=WP_002209046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209046.1;locus_tag=YPIP275_RS02980;product=EscN/YscN/HrcN family type III secretion system ATPase;protein_id=WP_002209046.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 35326 35727 . + . ID=gene-YPIP275_RS02985;Name=YPIP275_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02985;old_locus_tag=YPIP275_3210 NZ_AAOS02000003.1 Protein Homology CDS 35326 35727 . + 0 ID=cds-WP_002209047.1;Parent=gene-YPIP275_RS02985;Dbxref=GenBank:WP_002209047.1;Name=WP_002209047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304701.1;locus_tag=YPIP275_RS02985;product=type III secretion protein;protein_id=WP_002209047.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 35708 36106 . + . ID=gene-YPIP275_RS02990;Name=YPIP275_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02990 NZ_AAOS02000003.1 Protein Homology CDS 35708 36106 . + 0 ID=cds-WP_002218091.1;Parent=gene-YPIP275_RS02990;Dbxref=GenBank:WP_002218091.1;Name=WP_002218091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218091.1;locus_tag=YPIP275_RS02990;product=hypothetical protein;protein_id=WP_002218091.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 36084 37046 . + . ID=gene-YPIP275_RS02995;Name=YPIP275_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02995;old_locus_tag=YPIP275_3212 NZ_AAOS02000003.1 Protein Homology CDS 36084 37046 . + 0 ID=cds-WP_002209049.1;Parent=gene-YPIP275_RS02995;Dbxref=GenBank:WP_002209049.1;Name=WP_002209049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209049.1;locus_tag=YPIP275_RS02995;product=YscQ/HrcQ family type III secretion apparatus protein;protein_id=WP_002209049.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 37173 37823 . + . ID=gene-YPIP275_RS03000;Name=sctR;gbkey=Gene;gene=sctR;gene_biotype=protein_coding;locus_tag=YPIP275_RS03000;old_locus_tag=YPIP275_3213 NZ_AAOS02000003.1 Protein Homology CDS 37173 37823 . + 0 ID=cds-WP_002221023.1;Parent=gene-YPIP275_RS03000;Dbxref=GenBank:WP_002221023.1;Name=WP_002221023.1;Ontology_term=GO:0030254,GO:0016020,GO:0030257;gbkey=CDS;gene=sctR;go_component=membrane|0016020||IEA,type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221023.1;locus_tag=YPIP275_RS03000;product=type III secretion system export apparatus subunit SctR;protein_id=WP_002221023.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 37820 38113 . + . ID=gene-YPIP275_RS03005;Name=YPIP275_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03005;old_locus_tag=YPIP275_3214 NZ_AAOS02000003.1 Protein Homology CDS 37820 38113 . + 0 ID=cds-WP_002209051.1;Parent=gene-YPIP275_RS03005;Dbxref=GenBank:WP_002209051.1;Name=WP_002209051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209051.1;locus_tag=YPIP275_RS03005;product=EscS/YscS/HrcS family type III secretion system export apparatus protein;protein_id=WP_002209051.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 38115 38909 . + . ID=gene-YPIP275_RS03010;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=YPIP275_RS03010;old_locus_tag=YPIP275_3215 NZ_AAOS02000003.1 Protein Homology CDS 38115 38909 . + 0 ID=cds-WP_002209052.1;Parent=gene-YPIP275_RS03010;Dbxref=GenBank:WP_002209052.1;Name=WP_002209052.1;Ontology_term=GO:0030254,GO:0016020;gbkey=CDS;gene=sctT;go_component=membrane|0016020||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209052.1;locus_tag=YPIP275_RS03010;product=type III secretion system export apparatus subunit SctT;protein_id=WP_002209052.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 38899 39966 . + . ID=gene-YPIP275_RS03015;Name=YPIP275_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03015;old_locus_tag=YPIP275_3216 NZ_AAOS02000003.1 Protein Homology CDS 38899 39966 . + 0 ID=cds-WP_002209053.1;Parent=gene-YPIP275_RS03015;Dbxref=GenBank:WP_002209053.1;Name=WP_002209053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209053.1;locus_tag=YPIP275_RS03015;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;protein_id=WP_002209053.1;transl_table=11 NZ_AAOS02000003.1 RefSeq pseudogene 40185 40256 . + . ID=gene-YPIP275_RS28410;Name=YPIP275_RS28410;end_range=40256,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28410;partial=true;pseudo=true NZ_AAOS02000003.1 Protein Homology CDS 40185 40256 . + 0 ID=cds-YPIP275_RS28410;Parent=gene-YPIP275_RS28410;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=40256,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=YPIP275_RS28410;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 40349 41563 . + . ID=gene-YPIP275_RS03020;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=YPIP275_RS03020;old_locus_tag=YPIP275_3217 NZ_AAOS02000003.1 Protein Homology CDS 40349 41563 . + 0 ID=cds-WP_002209054.1;Parent=gene-YPIP275_RS03020;Dbxref=GenBank:WP_002209054.1;Name=WP_002209054.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105847.1;locus_tag=YPIP275_RS03020;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_002209054.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 41560 41829 . + . ID=gene-YPIP275_RS03025;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=YPIP275_RS03025;old_locus_tag=YPIP275_3218 NZ_AAOS02000003.1 Protein Homology CDS 41560 41829 . + 0 ID=cds-WP_002209055.1;Parent=gene-YPIP275_RS03025;Dbxref=GenBank:WP_002209055.1;Name=WP_002209055.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191578.1;locus_tag=YPIP275_RS03025;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_002209055.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 41907 42890 . - . ID=gene-YPIP275_RS03030;Name=YPIP275_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03030;old_locus_tag=YPIP275_3219 NZ_AAOS02000003.1 Protein Homology CDS 41907 42890 . - 0 ID=cds-WP_002209056.1;Parent=gene-YPIP275_RS03030;Dbxref=GenBank:WP_002209056.1;Name=WP_002209056.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016584811.1;locus_tag=YPIP275_RS03030;product=LysR family transcriptional regulator;protein_id=WP_002209056.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 43060 44346 . + . ID=gene-YPIP275_RS03035;Name=YPIP275_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03035;old_locus_tag=YPIP275_3220 NZ_AAOS02000003.1 Protein Homology CDS 43060 44346 . + 0 ID=cds-WP_002209057.1;Parent=gene-YPIP275_RS03035;Dbxref=GenBank:WP_002209057.1;Name=WP_002209057.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016261769.1;locus_tag=YPIP275_RS03035;product=amino acid permease;protein_id=WP_002209057.1;transl_table=11 NZ_AAOS02000003.1 RefSeq pseudogene 44392 45573 . + . ID=gene-YPIP275_RS03040;Name=metC;gbkey=Gene;gene=metC;gene_biotype=pseudogene;locus_tag=YPIP275_RS03040;pseudo=true NZ_AAOS02000003.1 Protein Homology CDS 44392 45573 . + 0 ID=cds-YPIP275_RS03040;Parent=gene-YPIP275_RS03040;Note=internal stop;Ontology_term=GO:0071265,GO:0047804;gbkey=CDS;gene=metC;go_function=cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304697.1;locus_tag=YPIP275_RS03040;product=cystathionine beta-lyase;pseudo=true;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 45714 46514 . - . ID=gene-YPIP275_RS03045;Name=YPIP275_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03045;old_locus_tag=YPIP275_3223 NZ_AAOS02000003.1 Protein Homology CDS 45714 46514 . - 0 ID=cds-WP_002209058.1;Parent=gene-YPIP275_RS03045;Dbxref=GenBank:WP_002209058.1;Name=WP_002209058.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209058.1;locus_tag=YPIP275_RS03045;product=heme ABC transporter ATP-binding protein;protein_id=WP_002209058.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 46507 47511 . - . ID=gene-YPIP275_RS03050;Name=YPIP275_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03050;old_locus_tag=YPIP275_3224 NZ_AAOS02000003.1 Protein Homology CDS 46507 47511 . - 0 ID=cds-WP_002209059.1;Parent=gene-YPIP275_RS03050;Dbxref=GenBank:WP_002209059.1;Name=WP_002209059.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209059.1;locus_tag=YPIP275_RS03050;product=FecCD family ABC transporter permease;protein_id=WP_002209059.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 47508 48347 . - . ID=gene-YPIP275_RS03055;Name=YPIP275_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03055;old_locus_tag=YPIP275_3225 NZ_AAOS02000003.1 Protein Homology CDS 47508 48347 . - 0 ID=cds-WP_002209060.1;Parent=gene-YPIP275_RS03055;Dbxref=GenBank:WP_002209060.1;Name=WP_002209060.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413435.1;locus_tag=YPIP275_RS03055;product=heme/hemin ABC transporter substrate-binding protein;protein_id=WP_002209060.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 48344 49381 . - . ID=gene-YPIP275_RS03060;Name=YPIP275_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03060;old_locus_tag=YPIP275_3226 NZ_AAOS02000003.1 Protein Homology CDS 48344 49381 . - 0 ID=cds-WP_002209061.1;Parent=gene-YPIP275_RS03060;Dbxref=GenBank:WP_002209061.1;Name=WP_002209061.1;Ontology_term=GO:0006826;gbkey=CDS;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209061.1;locus_tag=YPIP275_RS03060;product=hemin-degrading factor;protein_id=WP_002209061.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 49500 51530 . - . ID=gene-YPIP275_RS03065;Name=YPIP275_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03065;old_locus_tag=YPIP275_3227 NZ_AAOS02000003.1 Protein Homology CDS 49500 51530 . - 0 ID=cds-WP_002209062.1;Parent=gene-YPIP275_RS03065;Dbxref=GenBank:WP_002209062.1;Name=WP_002209062.1;Ontology_term=GO:0055085,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209062.1;locus_tag=YPIP275_RS03065;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;protein_id=WP_002209062.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 51660 51776 . - . ID=gene-YPIP275_RS29170;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=YPIP275_RS29170;old_locus_tag=YPIP275_3228 NZ_AAOS02000003.1 Protein Homology CDS 51660 51776 . - 0 ID=cds-WP_002215049.1;Parent=gene-YPIP275_RS29170;Dbxref=GenBank:WP_002215049.1;Name=WP_002215049.1;gbkey=CDS;gene=hemP;inference=COORDINATES: protein motif:HMM:NF022103.7;locus_tag=YPIP275_RS29170;product=hemin uptake protein HemP;protein_id=WP_002215049.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 51945 52595 . - . ID=gene-YPIP275_RS03070;Name=YPIP275_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03070;old_locus_tag=YPIP275_3229 NZ_AAOS02000003.1 Protein Homology CDS 51945 52595 . - 0 ID=cds-WP_002209064.1;Parent=gene-YPIP275_RS03070;Dbxref=GenBank:WP_002209064.1;Name=WP_002209064.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209064.1;locus_tag=YPIP275_RS03070;product=SDR family oxidoreductase;protein_id=WP_002209064.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 52629 53138 . - . ID=gene-YPIP275_RS03075;Name=hutX;gbkey=Gene;gene=hutX;gene_biotype=protein_coding;locus_tag=YPIP275_RS03075;old_locus_tag=YPIP275_3231 NZ_AAOS02000003.1 Protein Homology CDS 52629 53138 . - 0 ID=cds-WP_002209065.1;Parent=gene-YPIP275_RS03075;Dbxref=GenBank:WP_002209065.1;Name=WP_002209065.1;gbkey=CDS;gene=hutX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209065.1;locus_tag=YPIP275_RS03075;product=heme utilization cystosolic carrier protein HutX;protein_id=WP_002209065.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 53171 54484 . - . ID=gene-YPIP275_RS03080;Name=hutW;gbkey=Gene;gene=hutW;gene_biotype=protein_coding;locus_tag=YPIP275_RS03080;old_locus_tag=YPIP275_3232 NZ_AAOS02000003.1 Protein Homology CDS 53171 54484 . - 0 ID=cds-WP_002209066.1;Parent=gene-YPIP275_RS03080;Dbxref=GenBank:WP_002209066.1;Name=WP_002209066.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hutW;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084272.1;locus_tag=YPIP275_RS03080;product=heme anaerobic degradation radical SAM methyltransferase ChuW/HutW;protein_id=WP_002209066.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 54825 55625 . - . ID=gene-YPIP275_RS03085;Name=YPIP275_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03085;old_locus_tag=YPIP275_3233 NZ_AAOS02000003.1 Protein Homology CDS 54825 55625 . - 0 ID=cds-WP_002209067.1;Parent=gene-YPIP275_RS03085;Dbxref=GenBank:WP_002209067.1;Name=WP_002209067.1;Ontology_term=GO:0006555,GO:0004489,GO:0050660;gbkey=CDS;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=L-methionine metabolic process|0006555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209067.1;locus_tag=YPIP275_RS03085;product=methylenetetrahydrofolate reductase;protein_id=WP_002209067.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 55940 56428 . - . ID=gene-YPIP275_RS03090;Name=YPIP275_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03090;old_locus_tag=YPIP275_3234 NZ_AAOS02000003.1 Protein Homology CDS 55940 56428 . - 0 ID=cds-WP_002209068.1;Parent=gene-YPIP275_RS03090;Dbxref=GenBank:WP_002209068.1;Name=WP_002209068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209068.1;locus_tag=YPIP275_RS03090;product=tellurium resistance protein TerW;protein_id=WP_002209068.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 56825 57784 . - . ID=gene-YPIP275_RS03095;Name=YPIP275_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03095;old_locus_tag=YPIP275_3235 NZ_AAOS02000003.1 Protein Homology CDS 56825 57784 . - 0 ID=cds-WP_002209069.1;Parent=gene-YPIP275_RS03095;Dbxref=GenBank:WP_002209069.1;Name=WP_002209069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304696.1;locus_tag=YPIP275_RS03095;product=citrate lyase subunit beta;protein_id=WP_002209069.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 57784 58863 . - . ID=gene-YPIP275_RS03100;Name=YPIP275_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03100;old_locus_tag=YPIP275_3236 NZ_AAOS02000003.1 Protein Homology CDS 57784 58863 . - 0 ID=cds-WP_002209070.1;Parent=gene-YPIP275_RS03100;Dbxref=GenBank:WP_002209070.1;Name=WP_002209070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209070.1;locus_tag=YPIP275_RS03100;product=cysteine protease StiP family protein;protein_id=WP_002209070.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 58856 59668 . - . ID=gene-YPIP275_RS03105;Name=YPIP275_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03105;old_locus_tag=YPIP275_3237 NZ_AAOS02000003.1 Protein Homology CDS 58856 59668 . - 0 ID=cds-WP_002209071.1;Parent=gene-YPIP275_RS03105;Dbxref=GenBank:WP_002209071.1;Name=WP_002209071.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209071.1;locus_tag=YPIP275_RS03105;product=HAD family hydrolase;protein_id=WP_002209071.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 59661 60797 . - . ID=gene-YPIP275_RS03110;Name=YPIP275_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03110;old_locus_tag=YPIP275_3238 NZ_AAOS02000003.1 Protein Homology CDS 59661 60797 . - 0 ID=cds-WP_002209072.1;Parent=gene-YPIP275_RS03110;Dbxref=GenBank:WP_002209072.1;Name=WP_002209072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209072.1;locus_tag=YPIP275_RS03110;product=phosphoribosyltransferase domain-containing protein;protein_id=WP_002209072.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 60809 61870 . - . ID=gene-YPIP275_RS03115;Name=YPIP275_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03115;old_locus_tag=YPIP275_3239 NZ_AAOS02000003.1 Protein Homology CDS 60809 61870 . - 0 ID=cds-WP_002209073.1;Parent=gene-YPIP275_RS03115;Dbxref=GenBank:WP_002209073.1;Name=WP_002209073.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105843.1;locus_tag=YPIP275_RS03115;product=ATP-grasp domain-containing protein;protein_id=WP_002209073.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 62146 62739 . + . ID=gene-YPIP275_RS03120;Name=YPIP275_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03120;old_locus_tag=YPIP275_3240 NZ_AAOS02000003.1 Protein Homology CDS 62146 62739 . + 0 ID=cds-WP_002228131.1;Parent=gene-YPIP275_RS03120;Dbxref=GenBank:WP_002228131.1;Name=WP_002228131.1;Ontology_term=GO:0050896;gbkey=CDS;go_process=response to stimulus|0050896||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309378.1;locus_tag=YPIP275_RS03120;product=TerD family protein;protein_id=WP_002228131.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 62739 63923 . + . ID=gene-YPIP275_RS03125;Name=YPIP275_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03125;old_locus_tag=YPIP275_3241 NZ_AAOS02000003.1 Protein Homology CDS 62739 63923 . + 0 ID=cds-WP_002209075.1;Parent=gene-YPIP275_RS03125;Dbxref=GenBank:WP_002209075.1;Name=WP_002209075.1;Ontology_term=GO:0046690;gbkey=CDS;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209075.1;locus_tag=YPIP275_RS03125;product=TerD family protein;protein_id=WP_002209075.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 63956 64411 . + . ID=gene-YPIP275_RS03130;Name=YPIP275_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03130;old_locus_tag=YPIP275_3242 NZ_AAOS02000003.1 Protein Homology CDS 63956 64411 . + 0 ID=cds-WP_002209076.1;Parent=gene-YPIP275_RS03130;Dbxref=GenBank:WP_002209076.1;Name=WP_002209076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209076.1;locus_tag=YPIP275_RS03130;product=tellurite resistance TerB family protein;protein_id=WP_002209076.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 64433 65470 . + . ID=gene-YPIP275_RS03135;Name=YPIP275_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03135;old_locus_tag=YPIP275_3243 NZ_AAOS02000003.1 Protein Homology CDS 64433 65470 . + 0 ID=cds-WP_002209077.1;Parent=gene-YPIP275_RS03135;Dbxref=GenBank:WP_002209077.1;Name=WP_002209077.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304695.1;locus_tag=YPIP275_RS03135;product=TerC/Alx family metal homeostasis membrane protein;protein_id=WP_002209077.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 65534 66112 . + . ID=gene-YPIP275_RS03140;Name=YPIP275_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03140;old_locus_tag=YPIP275_3244 NZ_AAOS02000003.1 Protein Homology CDS 65534 66112 . + 0 ID=cds-WP_002209078.1;Parent=gene-YPIP275_RS03140;Dbxref=GenBank:WP_002209078.1;Name=WP_002209078.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309382.1;locus_tag=YPIP275_RS03140;product=TerD family protein;protein_id=WP_002209078.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 66296 66871 . + . ID=gene-YPIP275_RS03145;Name=YPIP275_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03145;old_locus_tag=YPIP275_3245 NZ_AAOS02000003.1 Protein Homology CDS 66296 66871 . + 0 ID=cds-WP_002209079.1;Parent=gene-YPIP275_RS03145;Dbxref=GenBank:WP_002209079.1;Name=WP_002209079.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309383.1;locus_tag=YPIP275_RS03145;product=TerD family protein;protein_id=WP_002209079.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 67584 68222 . + . ID=gene-YPIP275_RS03150;Name=YPIP275_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03150;old_locus_tag=YPIP275_3246 NZ_AAOS02000003.1 Protein Homology CDS 67584 68222 . + 0 ID=cds-WP_002209080.1;Parent=gene-YPIP275_RS03150;Dbxref=GenBank:WP_002209080.1;Name=WP_002209080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209080.1;locus_tag=YPIP275_RS03150;product=DUF1120 domain-containing protein;protein_id=WP_002209080.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 68473 70851 . + . ID=gene-YPIP275_RS03155;Name=YPIP275_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03155;old_locus_tag=YPIP275_3247 NZ_AAOS02000003.1 Protein Homology CDS 68473 70851 . + 0 ID=cds-WP_002209081.1;Parent=gene-YPIP275_RS03155;Dbxref=GenBank:WP_002209081.1;Name=WP_002209081.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304694.1;locus_tag=YPIP275_RS03155;product=fimbria/pilus outer membrane usher protein;protein_id=WP_002209081.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 70923 71666 . + . ID=gene-YPIP275_RS03160;Name=YPIP275_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03160;old_locus_tag=YPIP275_3248 NZ_AAOS02000003.1 Protein Homology CDS 70923 71666 . + 0 ID=cds-WP_002209082.1;Parent=gene-YPIP275_RS03160;Dbxref=GenBank:WP_002209082.1;Name=WP_002209082.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209082.1;locus_tag=YPIP275_RS03160;product=fimbria/pilus chaperone family protein;protein_id=WP_002209082.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 71677 71931 . + . ID=gene-YPIP275_RS03165;Name=YPIP275_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03165;old_locus_tag=YPIP275_3249 NZ_AAOS02000003.1 Protein Homology CDS 71677 71931 . + 0 ID=cds-WP_002214631.1;Parent=gene-YPIP275_RS03165;Dbxref=GenBank:WP_002214631.1;Name=WP_002214631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214631.1;locus_tag=YPIP275_RS03165;product=hypothetical protein;protein_id=WP_002214631.1;transl_table=11 NZ_AAOS02000003.1 RefSeq pseudogene 72826 72909 . + . ID=gene-YPIP275_RS28420;Name=YPIP275_RS28420;end_range=72909,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28420;partial=true;pseudo=true NZ_AAOS02000003.1 Protein Homology CDS 72826 72909 . + 0 ID=cds-YPIP275_RS28420;Parent=gene-YPIP275_RS28420;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=72909,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213014.1;locus_tag=YPIP275_RS28420;partial=true;product=type VI secretion system contractile sheath small subunit;pseudo=true;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 73124 74443 . + . ID=gene-YPIP275_RS03170;Name=YPIP275_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03170;old_locus_tag=YPIP275_3251 NZ_AAOS02000003.1 Protein Homology CDS 73124 74443 . + 0 ID=cds-WP_002214633.1;Parent=gene-YPIP275_RS03170;Dbxref=GenBank:WP_002214633.1;Name=WP_002214633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214633.1;locus_tag=YPIP275_RS03170;product=hypothetical protein;protein_id=WP_002214633.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 75452 77509 . + . ID=gene-YPIP275_RS03180;Name=YPIP275_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03180;old_locus_tag=YPIP275_3253 NZ_AAOS02000003.1 Protein Homology CDS 75452 77509 . + 0 ID=cds-WP_002209085.1;Parent=gene-YPIP275_RS03180;Dbxref=GenBank:WP_002209085.1;Name=WP_002209085.1;Ontology_term=GO:0050660;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191591.1;locus_tag=YPIP275_RS03180;product=FAD-binding protein;protein_id=WP_002209085.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 77853 81569 . - . ID=gene-YPIP275_RS03185;Name=yapK;gbkey=Gene;gene=yapK;gene_biotype=protein_coding;locus_tag=YPIP275_RS03185;old_locus_tag=YPIP275_3254 NZ_AAOS02000003.1 Protein Homology CDS 77853 81569 . - 0 ID=cds-WP_002209086.1;Parent=gene-YPIP275_RS03185;Dbxref=GenBank:WP_002209086.1;Name=WP_002209086.1;gbkey=CDS;gene=yapK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_072120866.1;locus_tag=YPIP275_RS03185;product=autotransporter adhesin YapK;protein_id=WP_002209086.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 82494 83018 . + . ID=gene-YPIP275_RS03190;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=YPIP275_RS03190;old_locus_tag=YPIP275_3255 NZ_AAOS02000003.1 Protein Homology CDS 82494 83018 . + 0 ID=cds-WP_002209087.1;Parent=gene-YPIP275_RS03190;Dbxref=GenBank:WP_002209087.1;Name=WP_002209087.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209087.1;locus_tag=YPIP275_RS03190;product=chorismate lyase;protein_id=WP_002209087.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 83184 84050 . + . ID=gene-YPIP275_RS03195;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03195;old_locus_tag=YPIP275_3256 NZ_AAOS02000003.1 Protein Homology CDS 83184 84050 . + 0 ID=cds-WP_002209088.1;Parent=gene-YPIP275_RS03195;Dbxref=GenBank:WP_002209088.1;Name=WP_002209088.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209088.1;locus_tag=YPIP275_RS03195;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_002209088.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 84231 86708 . - . ID=gene-YPIP275_RS03200;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=YPIP275_RS03200;old_locus_tag=YPIP275_3257 NZ_AAOS02000003.1 Protein Homology CDS 84231 86708 . - 0 ID=cds-WP_002214644.1;Parent=gene-YPIP275_RS03200;Dbxref=GenBank:WP_002214644.1;Name=WP_002214644.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683539.1;locus_tag=YPIP275_RS03200;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_002214644.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 86836 87207 . + . ID=gene-YPIP275_RS03205;Name=YPIP275_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03205;old_locus_tag=YPIP275_3258 NZ_AAOS02000003.1 Protein Homology CDS 86836 87207 . + 0 ID=cds-WP_002209089.1;Parent=gene-YPIP275_RS03205;Dbxref=GenBank:WP_002209089.1;Name=WP_002209089.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209089.1;locus_tag=YPIP275_RS03205;product=diacylglycerol kinase;protein_id=WP_002209089.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 87332 87940 . + . ID=gene-YPIP275_RS03210;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03210;old_locus_tag=YPIP275_3259 NZ_AAOS02000003.1 Protein Homology CDS 87332 87940 . + 0 ID=cds-WP_002209090.1;Parent=gene-YPIP275_RS03210;Dbxref=GenBank:WP_002209090.1;Name=WP_002209090.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869689.1;locus_tag=YPIP275_RS03210;product=transcriptional repressor LexA;protein_id=WP_002209090.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 88100 88609 . - . ID=gene-YPIP275_RS03215;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=YPIP275_RS03215;old_locus_tag=YPIP275_3260 NZ_AAOS02000003.1 Protein Homology CDS 88100 88609 . - 0 ID=cds-WP_002214647.1;Parent=gene-YPIP275_RS03215;Dbxref=GenBank:WP_002214647.1;Name=WP_002214647.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214647.1;locus_tag=YPIP275_RS03215;product=zinc uptake transcriptional repressor Zur;protein_id=WP_002214647.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 88864 89901 . + . ID=gene-YPIP275_RS03220;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03220;old_locus_tag=YPIP275_3261 NZ_AAOS02000003.1 Protein Homology CDS 88864 89901 . + 0 ID=cds-WP_002209092.1;Parent=gene-YPIP275_RS03220;Dbxref=GenBank:WP_002209092.1;Name=WP_002209092.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209092.1;locus_tag=YPIP275_RS03220;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_002209092.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 90417 90635 . + . ID=gene-YPIP275_RS03225;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=YPIP275_RS03225;old_locus_tag=YPIP275_3262 NZ_AAOS02000003.1 Protein Homology CDS 90417 90635 . + 0 ID=cds-WP_002209093.1;Parent=gene-YPIP275_RS03225;Dbxref=GenBank:WP_002209093.1;Name=WP_002209093.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004719412.1;locus_tag=YPIP275_RS03225;product=envelope stress response protein PspG;protein_id=WP_002209093.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 90980 91963 . - . ID=gene-YPIP275_RS03230;Name=YPIP275_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03230;old_locus_tag=YPIP275_3263 NZ_AAOS02000003.1 Protein Homology CDS 90980 91963 . - 0 ID=cds-WP_002209094.1;Parent=gene-YPIP275_RS03230;Dbxref=GenBank:WP_002209094.1;Name=WP_002209094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082201.1;locus_tag=YPIP275_RS03230;product=quinone oxidoreductase;protein_id=WP_002209094.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 92295 93701 . + . ID=gene-YPIP275_RS03235;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=YPIP275_RS03235;old_locus_tag=YPIP275_3264 NZ_AAOS02000003.1 Protein Homology CDS 92295 93701 . + 0 ID=cds-WP_002209095.1;Parent=gene-YPIP275_RS03235;Dbxref=GenBank:WP_002209095.1;Name=WP_002209095.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004711204.1;locus_tag=YPIP275_RS03235;product=replicative DNA helicase;protein_id=WP_002209095.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 93798 94877 . + . ID=gene-YPIP275_RS03240;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=YPIP275_RS03240;old_locus_tag=YPIP275_3265 NZ_AAOS02000003.1 Protein Homology CDS 93798 94877 . + 0 ID=cds-WP_002209096.1;Parent=gene-YPIP275_RS03240;Dbxref=GenBank:WP_002209096.1;Name=WP_002209096.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304687.1;locus_tag=YPIP275_RS03240;product=alanine racemase;protein_id=WP_002209096.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 95063 96256 . + . ID=gene-YPIP275_RS03245;Name=YPIP275_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03245;old_locus_tag=YPIP275_3266 NZ_AAOS02000003.1 Protein Homology CDS 95063 96256 . + 0 ID=cds-WP_002209097.1;Parent=gene-YPIP275_RS03245;Dbxref=GenBank:WP_002209097.1;Name=WP_002209097.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304686.1;locus_tag=YPIP275_RS03245;product=amino acid aminotransferase;protein_id=WP_002209097.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 96783 97142 . + . ID=gene-YPIP275_RS03250;Name=YPIP275_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03250;old_locus_tag=YPIP275_3267 NZ_AAOS02000003.1 Protein Homology CDS 96783 97142 . + 0 ID=cds-WP_002209098.1;Parent=gene-YPIP275_RS03250;Dbxref=GenBank:WP_002209098.1;Name=WP_002209098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209098.1;locus_tag=YPIP275_RS03250;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_002209098.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 97235 100078 . - . ID=gene-YPIP275_RS03255;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03255;old_locus_tag=YPIP275_3268 NZ_AAOS02000003.1 Protein Homology CDS 97235 100078 . - 0 ID=cds-WP_002209099.1;Parent=gene-YPIP275_RS03255;Dbxref=GenBank:WP_002209099.1;Name=WP_002209099.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105829.1;locus_tag=YPIP275_RS03255;product=excinuclease ABC subunit UvrA;protein_id=WP_002209099.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 100536 101084 . + . ID=gene-YPIP275_RS03260;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=YPIP275_RS03260;old_locus_tag=YPIP275_3269 NZ_AAOS02000003.1 Protein Homology CDS 100536 101084 . + 0 ID=cds-WP_002209100.1;Parent=gene-YPIP275_RS03260;Dbxref=GenBank:WP_002209100.1;Name=WP_002209100.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168322.1;locus_tag=YPIP275_RS03260;product=single-stranded DNA-binding protein SSB1;protein_id=WP_002209100.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 101331 101645 . - . ID=gene-YPIP275_RS03265;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=YPIP275_RS03265;old_locus_tag=YPIP275_3270 NZ_AAOS02000003.1 Protein Homology CDS 101331 101645 . - 0 ID=cds-WP_002209101.1;Parent=gene-YPIP275_RS03265;Dbxref=GenBank:WP_002209101.1;Name=WP_002209101.1;Ontology_term=GO:0019318,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=hexose metabolic process|0019318||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=YPIP275_RS03265;product=L-rhamnose mutarotase;protein_id=WP_002209101.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 101659 102807 . - . ID=gene-YPIP275_RS03270;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=YPIP275_RS03270;old_locus_tag=YPIP275_3271 NZ_AAOS02000003.1 Protein Homology CDS 101659 102807 . - 0 ID=cds-WP_002209102.1;Parent=gene-YPIP275_RS03270;Dbxref=GenBank:WP_002209102.1;Name=WP_002209102.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224358.1;locus_tag=YPIP275_RS03270;product=lactaldehyde reductase;protein_id=WP_002209102.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 102874 103698 . - . ID=gene-YPIP275_RS03275;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=YPIP275_RS03275;old_locus_tag=YPIP275_3272 NZ_AAOS02000003.1 Protein Homology CDS 102874 103698 . - 0 ID=cds-WP_002209103.1;Parent=gene-YPIP275_RS03275;Dbxref=GenBank:WP_002209103.1;Name=WP_002209103.1;Ontology_term=GO:0019301,GO:0008994;gbkey=CDS;gene=rhaD;go_function=rhamnulose-1-phosphate aldolase activity|0008994||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674148.1;locus_tag=YPIP275_RS03275;product=rhamnulose-1-phosphate aldolase;protein_id=WP_002209103.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 103711 104967 . - . ID=gene-YPIP275_RS03280;Name=YPIP275_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03280;old_locus_tag=YPIP275_3273 NZ_AAOS02000003.1 Protein Homology CDS 103711 104967 . - 0 ID=cds-WP_002209104.1;Parent=gene-YPIP275_RS03280;Dbxref=GenBank:WP_002209104.1;Name=WP_002209104.1;Ontology_term=GO:0019318,GO:0008740,GO:0030145;gbkey=CDS;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=hexose metabolic process|0019318||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105828.1;locus_tag=YPIP275_RS03280;product=L-rhamnose isomerase;protein_id=WP_002209104.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 104964 106421 . - . ID=gene-YPIP275_RS03285;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=YPIP275_RS03285;old_locus_tag=YPIP275_3274 NZ_AAOS02000003.1 Protein Homology CDS 104964 106421 . - 0 ID=cds-WP_002209105.1;Parent=gene-YPIP275_RS03285;Dbxref=GenBank:WP_002209105.1;Name=WP_002209105.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209105.1;locus_tag=YPIP275_RS03285;product=rhamnulokinase;protein_id=WP_002209105.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 106420 106626 . + . ID=gene-YPIP275_RS03290;Name=YPIP275_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03290;old_locus_tag=YPIP275_3275 NZ_AAOS02000003.1 Protein Homology CDS 106420 106626 . + 0 ID=cds-WP_002209106.1;Parent=gene-YPIP275_RS03290;Dbxref=GenBank:WP_002209106.1;Name=WP_002209106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209106.1;locus_tag=YPIP275_RS03290;product=hypothetical protein;protein_id=WP_002209106.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 106848 107669 . + . ID=gene-YPIP275_RS03300;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=YPIP275_RS03300;old_locus_tag=YPIP275_3277 NZ_AAOS02000003.1 Protein Homology CDS 106848 107669 . + 0 ID=cds-WP_002209108.1;Parent=gene-YPIP275_RS03300;Dbxref=GenBank:WP_002209108.1;Name=WP_002209108.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706026.1;locus_tag=YPIP275_RS03300;product=HTH-type transcriptional activator RhaS;protein_id=WP_002209108.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 107802 108674 . + . ID=gene-YPIP275_RS03305;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=YPIP275_RS03305;old_locus_tag=YPIP275_3279 NZ_AAOS02000003.1 Protein Homology CDS 107802 108674 . + 0 ID=cds-WP_002209110.1;Parent=gene-YPIP275_RS03305;Dbxref=GenBank:WP_002209110.1;Name=WP_002209110.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304682.1;locus_tag=YPIP275_RS03305;product=HTH-type transcriptional activator RhaR;protein_id=WP_002209110.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 108823 109857 . - . ID=gene-YPIP275_RS03310;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=YPIP275_RS03310;old_locus_tag=YPIP275_3280 NZ_AAOS02000003.1 Protein Homology CDS 108823 109857 . - 0 ID=cds-WP_002209111.1;Parent=gene-YPIP275_RS03310;Dbxref=GenBank:WP_002209111.1;Name=WP_002209111.1;gbkey=CDS;gene=rhaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=YPIP275_RS03310;product=L-rhamnose/proton symporter RhaT;protein_id=WP_002209111.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 110011 110277 . + . ID=gene-YPIP275_RS29175;Name=YPIP275_RS29175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29175 NZ_AAOS02000003.1 Protein Homology CDS 110011 110277 . + 0 ID=cds-WP_002217947.1;Parent=gene-YPIP275_RS29175;Dbxref=GenBank:WP_002217947.1;Name=WP_002217947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217947.1;locus_tag=YPIP275_RS29175;product=hypothetical protein;protein_id=WP_002217947.1;transl_table=11 NZ_AAOS02000003.1 RefSeq pseudogene 110294 110650 . + . ID=gene-YPIP275_RS26770;Name=YPIP275_RS26770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS26770;partial=true;pseudo=true;start_range=.,110294 NZ_AAOS02000003.1 Protein Homology CDS 110294 110650 . + 0 ID=cds-YPIP275_RS26770;Parent=gene-YPIP275_RS26770;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_209027934.1;locus_tag=YPIP275_RS26770;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,110294;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 110713 111138 . - . ID=gene-YPIP275_RS03320;Name=YPIP275_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03320;old_locus_tag=YPIP275_3281 NZ_AAOS02000003.1 Protein Homology CDS 110713 111138 . - 0 ID=cds-WP_002209112.1;Parent=gene-YPIP275_RS03320;Dbxref=GenBank:WP_002209112.1;Name=WP_002209112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209112.1;locus_tag=YPIP275_RS03320;product=subtilase family AB5 toxin binding subunit;protein_id=WP_002209112.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 111565 114120 . + . ID=gene-YPIP275_RS03330;Name=YPIP275_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03330;old_locus_tag=YPIP275_3283 NZ_AAOS02000003.1 Protein Homology CDS 111565 114120 . + 0 ID=cds-WP_002209115.1;Parent=gene-YPIP275_RS03330;Dbxref=GenBank:WP_002209115.1;Name=WP_002209115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304680.1;locus_tag=YPIP275_RS03330;product=putative mucin/carbohydrate-binding domain-containing protein;protein_id=WP_002209115.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 114554 114629 . - . ID=gene-YPIP275_RS03335;Name=YPIP275_RS03335;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS03335;old_locus_tag=YPIP275_3284 NZ_AAOS02000003.1 tRNAscan-SE tRNA 114554 114629 . - . ID=rna-YPIP275_RS03335;Parent=gene-YPIP275_RS03335;anticodon=(pos:complement(114594..114596));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS03335;product=tRNA-Phe NZ_AAOS02000003.1 tRNAscan-SE exon 114554 114629 . - . ID=exon-YPIP275_RS03335-1;Parent=rna-YPIP275_RS03335;anticodon=(pos:complement(114594..114596));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS03335;product=tRNA-Phe NZ_AAOS02000003.1 RefSeq gene 114774 115349 . - . ID=gene-YPIP275_RS03340;Name=YPIP275_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03340;old_locus_tag=YPIP275_3286 NZ_AAOS02000003.1 Protein Homology CDS 114774 115349 . - 0 ID=cds-WP_002209117.1;Parent=gene-YPIP275_RS03340;Dbxref=GenBank:WP_002209117.1;Name=WP_002209117.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175574.1;locus_tag=YPIP275_RS03340;product=transcriptional regulator;protein_id=WP_002209117.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 115381 115566 . + . ID=gene-YPIP275_RS26775;Name=YPIP275_RS26775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26775 NZ_AAOS02000003.1 Protein Homology CDS 115381 115566 . + 0 ID=cds-WP_002216121.1;Parent=gene-YPIP275_RS26775;Dbxref=GenBank:WP_002216121.1;Name=WP_002216121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216121.1;locus_tag=YPIP275_RS26775;product=hypothetical protein;protein_id=WP_002216121.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 115769 117784 . + . ID=gene-YPIP275_RS03345;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03345;old_locus_tag=YPIP275_3287 NZ_AAOS02000003.1 Protein Homology CDS 115769 117784 . + 0 ID=cds-WP_002209118.1;Parent=gene-YPIP275_RS03345;Dbxref=GenBank:WP_002209118.1;Name=WP_002209118.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105760.1;locus_tag=YPIP275_RS03345;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_002209118.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 117807 118364 . + . ID=gene-YPIP275_RS03350;Name=YPIP275_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03350;old_locus_tag=YPIP275_3288 NZ_AAOS02000003.1 Protein Homology CDS 117807 118364 . + 0 ID=cds-WP_002209119.1;Parent=gene-YPIP275_RS03350;Dbxref=GenBank:WP_002209119.1;Name=WP_002209119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209119.1;locus_tag=YPIP275_RS03350;product=4Fe-4S binding protein;protein_id=WP_002209119.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 118387 120534 . + . ID=gene-YPIP275_RS03355;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=YPIP275_RS03355;old_locus_tag=YPIP275_3289 NZ_AAOS02000003.1 Protein Homology CDS 118387 120534 . + 0 ID=cds-WP_002209120.1;Parent=gene-YPIP275_RS03355;Dbxref=GenBank:WP_002209120.1;Name=WP_002209120.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191608.1;locus_tag=YPIP275_RS03355;product=formate dehydrogenase subunit alpha;protein_id=WP_002209120.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 120596 122383 . - . ID=gene-YPIP275_RS03360;Name=YPIP275_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03360;old_locus_tag=YPIP275_3290 NZ_AAOS02000003.1 Protein Homology CDS 120596 122383 . - 0 ID=cds-WP_002209121.1;Parent=gene-YPIP275_RS03360;Dbxref=GenBank:WP_002209121.1;Name=WP_002209121.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209121.1;locus_tag=YPIP275_RS03360;product=protein-disulfide reductase DsbD;protein_id=WP_002209121.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 122359 122718 . - . ID=gene-YPIP275_RS03365;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03365;old_locus_tag=YPIP275_3291 NZ_AAOS02000003.1 Protein Homology CDS 122359 122718 . - 0 ID=cds-WP_002209122.1;Parent=gene-YPIP275_RS03365;Dbxref=GenBank:WP_002209122.1;Name=WP_002209122.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209122.1;locus_tag=YPIP275_RS03365;product=divalent cation tolerance protein CutA;protein_id=WP_002209122.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 122903 124204 . - . ID=gene-YPIP275_RS03370;Name=YPIP275_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03370;old_locus_tag=YPIP275_3292 NZ_AAOS02000003.1 Protein Homology CDS 122903 124204 . - 0 ID=cds-WP_002209123.1;Parent=gene-YPIP275_RS03370;Dbxref=GenBank:WP_002209123.1;Name=WP_002209123.1;Ontology_term=GO:0015740,GO:0015556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209123.1;locus_tag=YPIP275_RS03370;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_002209123.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 124324 125760 . - . ID=gene-YPIP275_RS03375;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03375;old_locus_tag=YPIP275_3293 NZ_AAOS02000003.1 Protein Homology CDS 124324 125760 . - 0 ID=cds-WP_002209124.1;Parent=gene-YPIP275_RS03375;Dbxref=GenBank:WP_002209124.1;Name=WP_002209124.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=YPIP275_RS03375;product=aspartate ammonia-lyase;protein_id=WP_002209124.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 126208 126786 . + . ID=gene-YPIP275_RS03380;Name=YPIP275_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03380;old_locus_tag=YPIP275_3294 NZ_AAOS02000003.1 Protein Homology CDS 126208 126786 . + 0 ID=cds-WP_002209126.1;Parent=gene-YPIP275_RS03380;Dbxref=GenBank:WP_002209126.1;Name=WP_002209126.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209126.1;locus_tag=YPIP275_RS03380;product=FxsA family protein;protein_id=WP_002209126.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 127041 127334 . + . ID=gene-YPIP275_RS03385;Name=YPIP275_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03385;old_locus_tag=YPIP275_3295 NZ_AAOS02000003.1 Protein Homology CDS 127041 127334 . + 0 ID=cds-WP_002209127.1;Parent=gene-YPIP275_RS03385;Dbxref=GenBank:WP_002209127.1;Name=WP_002209127.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391824.1;locus_tag=YPIP275_RS03385;product=co-chaperone GroES;protein_id=WP_002209127.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 127381 129027 . + . ID=gene-YPIP275_RS03390;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=YPIP275_RS03390;old_locus_tag=YPIP275_3296 NZ_AAOS02000003.1 Protein Homology CDS 127381 129027 . + 0 ID=cds-WP_002209128.1;Parent=gene-YPIP275_RS03390;Dbxref=GenBank:WP_002209128.1;Name=WP_002209128.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463194.1;locus_tag=YPIP275_RS03390;product=chaperonin GroEL;protein_id=WP_002209128.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 129161 129376 . + . ID=gene-YPIP275_RS29180;Name=YPIP275_RS29180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29180 NZ_AAOS02000003.1 Protein Homology CDS 129161 129376 . + 0 ID=cds-WP_002353623.1;Parent=gene-YPIP275_RS29180;Dbxref=GenBank:WP_002353623.1;Name=WP_002353623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353623.1;locus_tag=YPIP275_RS29180;product=hypothetical protein;protein_id=WP_002353623.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 129705 130049 . + . ID=gene-YPIP275_RS03395;Name=YPIP275_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03395;old_locus_tag=YPIP275_3297 NZ_AAOS02000003.1 Protein Homology CDS 129705 130049 . + 0 ID=cds-WP_032465615.1;Parent=gene-YPIP275_RS03395;Dbxref=GenBank:WP_032465615.1;Name=WP_032465615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175566.1;locus_tag=YPIP275_RS03395;product=DUF4156 domain-containing protein;protein_id=WP_032465615.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 130334 131362 . - . ID=gene-YPIP275_RS03400;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=YPIP275_RS03400;old_locus_tag=YPIP275_3298 NZ_AAOS02000003.1 Protein Homology CDS 130334 131362 . - 0 ID=cds-WP_002228125.1;Parent=gene-YPIP275_RS03400;Dbxref=GenBank:WP_002228125.1;Name=WP_002228125.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228125.1;locus_tag=YPIP275_RS03400;product=EF-P beta-lysylation protein EpmB;protein_id=WP_002228125.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 131398 131964 . + . ID=gene-YPIP275_RS03405;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=YPIP275_RS03405;old_locus_tag=YPIP275_3299 NZ_AAOS02000003.1 Protein Homology CDS 131398 131964 . + 0 ID=cds-WP_002209131.1;Parent=gene-YPIP275_RS03405;Dbxref=GenBank:WP_002209131.1;Name=WP_002209131.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=YPIP275_RS03405;product=elongation factor P;protein_id=WP_002209131.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 132211 132525 . + . ID=gene-YPIP275_RS03410;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=YPIP275_RS03410;old_locus_tag=YPIP275_3301 NZ_AAOS02000003.1 Protein Homology CDS 132211 132525 . + 0 ID=cds-WP_002228124.1;Parent=gene-YPIP275_RS03410;Dbxref=GenBank:WP_002228124.1;Name=WP_002228124.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392447.1;locus_tag=YPIP275_RS03410;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_002228124.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 132744 133202 . - . ID=gene-YPIP275_RS03415;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03415;old_locus_tag=YPIP275_3302 NZ_AAOS02000003.1 Protein Homology CDS 132744 133202 . - 0 ID=cds-WP_002213775.1-37;Parent=gene-YPIP275_RS03415;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS03415;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 133400 133756 . - . ID=gene-YPIP275_RS03425;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=YPIP275_RS03425;old_locus_tag=YPIP275_3303 NZ_AAOS02000003.1 Protein Homology CDS 133400 133756 . - 0 ID=cds-WP_002209134.1;Parent=gene-YPIP275_RS03425;Dbxref=GenBank:WP_002209134.1;Name=WP_002209134.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304677.1;locus_tag=YPIP275_RS03425;product=fumarate reductase subunit FrdD;protein_id=WP_002209134.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 133773 134165 . - . ID=gene-YPIP275_RS03430;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=YPIP275_RS03430;old_locus_tag=YPIP275_3304 NZ_AAOS02000003.1 Protein Homology CDS 133773 134165 . - 0 ID=cds-WP_002209135.1;Parent=gene-YPIP275_RS03430;Dbxref=GenBank:WP_002209135.1;Name=WP_002209135.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156465.1;locus_tag=YPIP275_RS03430;product=fumarate reductase subunit FrdC;protein_id=WP_002209135.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 134182 134916 . - . ID=gene-YPIP275_RS03435;Name=YPIP275_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03435;old_locus_tag=YPIP275_3305 NZ_AAOS02000003.1 Protein Homology CDS 134182 134916 . - 0 ID=cds-WP_002209136.1;Parent=gene-YPIP275_RS03435;Dbxref=GenBank:WP_002209136.1;Name=WP_002209136.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175554.1;locus_tag=YPIP275_RS03435;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_002209136.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 134909 136732 . - . ID=gene-YPIP275_RS03440;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03440;old_locus_tag=YPIP275_3306 NZ_AAOS02000003.1 Protein Homology CDS 134909 136732 . - 0 ID=cds-WP_002209137.1;Parent=gene-YPIP275_RS03440;Dbxref=GenBank:WP_002209137.1;Name=WP_002209137.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815417.1;locus_tag=YPIP275_RS03440;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_002209137.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 136839 137030 . + . ID=gene-YPIP275_RS03445;Name=YPIP275_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03445;old_locus_tag=YPIP275_3307 NZ_AAOS02000003.1 Protein Homology CDS 136839 137030 . + 0 ID=cds-WP_002209138.1;Parent=gene-YPIP275_RS03445;Dbxref=GenBank:WP_002209138.1;Name=WP_002209138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209138.1;locus_tag=YPIP275_RS03445;product=hypothetical protein;protein_id=WP_002209138.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 137190 138167 . + . ID=gene-YPIP275_RS03450;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03450;old_locus_tag=YPIP275_3308 NZ_AAOS02000003.1 Protein Homology CDS 137190 138167 . + 0 ID=cds-WP_002209139.1;Parent=gene-YPIP275_RS03450;Dbxref=GenBank:WP_002209139.1;Name=WP_002209139.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209139.1;locus_tag=YPIP275_RS03450;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_002209139.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 138288 141629 . - . ID=gene-YPIP275_RS03455;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=YPIP275_RS03455;old_locus_tag=YPIP275_3309 NZ_AAOS02000003.1 Protein Homology CDS 138288 141629 . - 0 ID=cds-WP_002209140.1;Parent=gene-YPIP275_RS03455;Dbxref=GenBank:WP_002209140.1;Name=WP_002209140.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906457.1;locus_tag=YPIP275_RS03455;product=miniconductance mechanosensitive channel MscM;protein_id=WP_002209140.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 141671 142552 . - . ID=gene-YPIP275_RS03460;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=YPIP275_RS03460;old_locus_tag=YPIP275_3310 NZ_AAOS02000003.1 Protein Homology CDS 141671 142552 . - 0 ID=cds-WP_002209141.1;Parent=gene-YPIP275_RS03460;Dbxref=GenBank:WP_002209141.1;Name=WP_002209141.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002423325.1;locus_tag=YPIP275_RS03460;product=archaetidylserine decarboxylase;protein_id=WP_002209141.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 142877 143929 . - . ID=gene-YPIP275_RS03465;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03465;old_locus_tag=YPIP275_3311 NZ_AAOS02000003.1 Protein Homology CDS 142877 143929 . - 0 ID=cds-WP_002209142.1;Parent=gene-YPIP275_RS03465;Dbxref=GenBank:WP_002209142.1;Name=WP_002209142.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156445.1;locus_tag=YPIP275_RS03465;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_002209142.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 144129 144674 . + . ID=gene-YPIP275_RS03475;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=YPIP275_RS03475;old_locus_tag=YPIP275_3312 NZ_AAOS02000003.1 Protein Homology CDS 144129 144674 . + 0 ID=cds-WP_002209143.1;Parent=gene-YPIP275_RS03475;Dbxref=GenBank:WP_002209143.1;Name=WP_002209143.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873932.1;locus_tag=YPIP275_RS03475;product=oligoribonuclease;protein_id=WP_002209143.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 145232 145307 . + . ID=gene-YPIP275_RS03485;Name=YPIP275_RS03485;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS03485;old_locus_tag=YPIP275_3313 NZ_AAOS02000003.1 tRNAscan-SE tRNA 145232 145307 . + . ID=rna-YPIP275_RS03485;Parent=gene-YPIP275_RS03485;anticodon=(pos:145265..145267);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS03485;product=tRNA-Gly NZ_AAOS02000003.1 tRNAscan-SE exon 145232 145307 . + . ID=exon-YPIP275_RS03485-1;Parent=rna-YPIP275_RS03485;anticodon=(pos:145265..145267);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS03485;product=tRNA-Gly NZ_AAOS02000003.1 RefSeq gene 145619 146854 . - . ID=gene-YPIP275_RS03490;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=YPIP275_RS03490;old_locus_tag=YPIP275_3314 NZ_AAOS02000003.1 Protein Homology CDS 145619 146854 . - 0 ID=cds-WP_002209144.1;Parent=gene-YPIP275_RS03490;Dbxref=GenBank:WP_002209144.1;Name=WP_002209144.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228676.1;locus_tag=YPIP275_RS03490;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_002209144.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 146853 148367 . + . ID=gene-YPIP275_RS03495;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=YPIP275_RS03495;old_locus_tag=YPIP275_3315 NZ_AAOS02000003.1 Protein Homology CDS 146853 148367 . + 0 ID=cds-WP_002209145.1;Parent=gene-YPIP275_RS03495;Dbxref=GenBank:WP_002209145.1;Name=WP_002209145.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080720.1;locus_tag=YPIP275_RS03495;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_002209145.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 148378 148848 . + . ID=gene-YPIP275_RS03500;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=YPIP275_RS03500;old_locus_tag=YPIP275_3316 NZ_AAOS02000003.1 Protein Homology CDS 148378 148848 . + 0 ID=cds-WP_002209146.1;Parent=gene-YPIP275_RS03500;Dbxref=GenBank:WP_002209146.1;Name=WP_002209146.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156441.1;locus_tag=YPIP275_RS03500;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_002209146.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 148856 150769 . + . ID=gene-YPIP275_RS03505;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=YPIP275_RS03505;old_locus_tag=YPIP275_3317 NZ_AAOS02000003.1 Protein Homology CDS 148856 150769 . + 0 ID=cds-WP_002232017.1;Parent=gene-YPIP275_RS03505;Dbxref=GenBank:WP_002232017.1;Name=WP_002232017.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413447.1;locus_tag=YPIP275_RS03505;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_002232017.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 150785 152692 . + . ID=gene-YPIP275_RS03510;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=YPIP275_RS03510;old_locus_tag=YPIP275_3318 NZ_AAOS02000003.1 Protein Homology CDS 150785 152692 . + 0 ID=cds-WP_002209148.1;Parent=gene-YPIP275_RS03510;Dbxref=GenBank:WP_002209148.1;Name=WP_002209148.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209148.1;locus_tag=YPIP275_RS03510;product=DNA mismatch repair endonuclease MutL;protein_id=WP_002209148.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 152685 153626 . + . ID=gene-YPIP275_RS03515;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03515;old_locus_tag=YPIP275_3319 NZ_AAOS02000003.1 Protein Homology CDS 152685 153626 . + 0 ID=cds-WP_002209149.1;Parent=gene-YPIP275_RS03515;Dbxref=GenBank:WP_002209149.1;Name=WP_002209149.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095429.1;locus_tag=YPIP275_RS03515;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_002209149.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 153742 154047 . + . ID=gene-YPIP275_RS03520;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=YPIP275_RS03520;old_locus_tag=YPIP275_3320 NZ_AAOS02000003.1 Protein Homology CDS 153742 154047 . + 0 ID=cds-WP_002209151.1;Parent=gene-YPIP275_RS03520;Dbxref=GenBank:WP_002209151.1;Name=WP_002209151.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209151.1;locus_tag=YPIP275_RS03520;product=RNA chaperone Hfq;protein_id=WP_002209151.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 154146 155432 . + . ID=gene-YPIP275_RS03525;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=YPIP275_RS03525;old_locus_tag=YPIP275_3321 NZ_AAOS02000003.1 Protein Homology CDS 154146 155432 . + 0 ID=cds-WP_002209152.1;Parent=gene-YPIP275_RS03525;Dbxref=GenBank:WP_002209152.1;Name=WP_002209152.1;Ontology_term=GO:0072344,GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;go_process=rescue of stalled cytosolic ribosome|0072344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105752.1;locus_tag=YPIP275_RS03525;product=ribosome rescue GTPase HflX;protein_id=WP_002209152.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 155673 156932 . + . ID=gene-YPIP275_RS03530;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=YPIP275_RS03530;old_locus_tag=YPIP275_3322 NZ_AAOS02000003.1 Protein Homology CDS 155673 156932 . + 0 ID=cds-WP_002209154.1;Parent=gene-YPIP275_RS03530;Dbxref=GenBank:WP_002209154.1;Name=WP_002209154.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209154.1;locus_tag=YPIP275_RS03530;product=FtsH protease activity modulator HflK;protein_id=WP_002209154.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 156936 157940 . + . ID=gene-YPIP275_RS03535;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=YPIP275_RS03535;old_locus_tag=YPIP275_3323 NZ_AAOS02000003.1 Protein Homology CDS 156936 157940 . + 0 ID=cds-WP_002209155.1;Parent=gene-YPIP275_RS03535;Dbxref=GenBank:WP_002209155.1;Name=WP_002209155.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875464.1;locus_tag=YPIP275_RS03535;product=protease modulator HflC;protein_id=WP_002209155.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 158112 158312 . + . ID=gene-YPIP275_RS03540;Name=YPIP275_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03540;old_locus_tag=YPIP275_3324 NZ_AAOS02000003.1 Protein Homology CDS 158112 158312 . + 0 ID=cds-WP_002217227.1;Parent=gene-YPIP275_RS03540;Dbxref=GenBank:WP_002217227.1;Name=WP_002217227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217227.1;locus_tag=YPIP275_RS03540;product=DUF2065 domain-containing protein;protein_id=WP_002217227.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 158412 159710 . + . ID=gene-YPIP275_RS03545;Name=YPIP275_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03545;old_locus_tag=YPIP275_3325 NZ_AAOS02000003.1 Protein Homology CDS 158412 159710 . + 0 ID=cds-WP_002209157.1;Parent=gene-YPIP275_RS03545;Dbxref=GenBank:WP_002209157.1;Name=WP_002209157.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=YPIP275_RS03545;product=adenylosuccinate synthase;protein_id=WP_002209157.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 160079 160504 . + . ID=gene-YPIP275_RS03550;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=YPIP275_RS03550;old_locus_tag=YPIP275_3326 NZ_AAOS02000003.1 Protein Homology CDS 160079 160504 . + 0 ID=cds-WP_002217229.1;Parent=gene-YPIP275_RS03550;Dbxref=GenBank:WP_002217229.1;Name=WP_002217229.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=YPIP275_RS03550;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_002217229.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 160745 163279 . + . ID=gene-YPIP275_RS03555;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=YPIP275_RS03555;old_locus_tag=YPIP275_3327 NZ_AAOS02000003.1 Protein Homology CDS 160745 163279 . + 0 ID=cds-WP_002209159.1;Parent=gene-YPIP275_RS03555;Dbxref=GenBank:WP_002209159.1;Name=WP_002209159.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413448.1;locus_tag=YPIP275_RS03555;product=ribonuclease R;protein_id=WP_002209159.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 163398 164138 . + . ID=gene-YPIP275_RS03560;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=YPIP275_RS03560;old_locus_tag=YPIP275_3329 NZ_AAOS02000003.1 Protein Homology CDS 163398 164138 . + 0 ID=cds-WP_002209161.1;Parent=gene-YPIP275_RS03560;Dbxref=GenBank:WP_002209161.1;Name=WP_002209161.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209161.1;locus_tag=YPIP275_RS03560;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_002209161.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 164558 166189 . + . ID=gene-YPIP275_RS03565;Name=YPIP275_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03565;old_locus_tag=YPIP275_3330 NZ_AAOS02000003.1 Protein Homology CDS 164558 166189 . + 0 ID=cds-WP_002353634.1;Parent=gene-YPIP275_RS03565;Dbxref=GenBank:WP_002353634.1;Name=WP_002353634.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353634.1;locus_tag=YPIP275_RS03565;product=isovaleryl-CoA dehydrogenase;protein_id=WP_002353634.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 166261 166524 . - . ID=gene-YPIP275_RS03570;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03570 NZ_AAOS02000003.1 Protein Homology CDS 166261 166524 . - 0 ID=cds-WP_306794190.1;Parent=gene-YPIP275_RS03570;Dbxref=GenBank:WP_306794190.1;Name=WP_306794190.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175485.1;locus_tag=YPIP275_RS03570;product=biofilm peroxide resistance protein BsmA;protein_id=WP_306794190.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 166912 167694 . - . ID=gene-YPIP275_RS03580;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS03580;old_locus_tag=YPIP275_3334 NZ_AAOS02000003.1 Protein Homology CDS 166912 167694 . - 0 ID=cds-WP_001317493.1-45;Parent=gene-YPIP275_RS03580;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS03580;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 167691 168713 . - . ID=gene-YPIP275_RS03585;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03585;old_locus_tag=YPIP275_3335 NZ_AAOS02000003.1 Protein Homology CDS 167691 168713 . - 0 ID=cds-WP_000255944.1-39;Parent=gene-YPIP275_RS03585;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS03585;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 168847 170910 . + . ID=gene-YPIP275_RS03590;Name=YPIP275_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03590;old_locus_tag=YPIP275_3336 NZ_AAOS02000003.1 Protein Homology CDS 168847 170910 . + 0 ID=cds-WP_002209166.1;Parent=gene-YPIP275_RS03590;Dbxref=GenBank:WP_002209166.1;Name=WP_002209166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209166.1;locus_tag=YPIP275_RS03590;product=McrB family protein;protein_id=WP_002209166.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 170907 172223 . + . ID=gene-YPIP275_RS03595;Name=YPIP275_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03595;old_locus_tag=YPIP275_3337 NZ_AAOS02000003.1 Protein Homology CDS 170907 172223 . + 0 ID=cds-WP_002209167.1;Parent=gene-YPIP275_RS03595;Dbxref=GenBank:WP_002209167.1;Name=WP_002209167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209167.1;locus_tag=YPIP275_RS03595;product=McrC family protein;protein_id=WP_002209167.1;transl_table=11 NZ_AAOS02000003.1 RefSeq pseudogene 172658 173108 . - . ID=gene-YPIP275_RS28425;Name=YPIP275_RS28425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28425;partial=true;pseudo=true;start_range=.,172658 NZ_AAOS02000003.1 Protein Homology CDS 172658 173108 . - 0 ID=cds-YPIP275_RS28425;Parent=gene-YPIP275_RS28425;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611477.1;locus_tag=YPIP275_RS28425;partial=true;product=transposase;pseudo=true;start_range=.,172658;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 173247 174572 . + . ID=gene-YPIP275_RS03610;Name=YPIP275_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03610;old_locus_tag=YPIP275_3339 NZ_AAOS02000003.1 Protein Homology CDS 173247 174572 . + 0 ID=cds-WP_002209169.1;Parent=gene-YPIP275_RS03610;Dbxref=GenBank:WP_002209169.1;Name=WP_002209169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209169.1;locus_tag=YPIP275_RS03610;product=TRM11 family methyltransferase;protein_id=WP_002209169.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 174622 175344 . + . ID=gene-YPIP275_RS03615;Name=YPIP275_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03615;old_locus_tag=YPIP275_3340 NZ_AAOS02000003.1 Protein Homology CDS 174622 175344 . + 0 ID=cds-WP_002209170.1;Parent=gene-YPIP275_RS03615;Dbxref=GenBank:WP_002209170.1;Name=WP_002209170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230553.1;locus_tag=YPIP275_RS03615;product=ATP-binding protein;protein_id=WP_002209170.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 175316 176689 . + . ID=gene-YPIP275_RS03620;Name=YPIP275_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03620;old_locus_tag=YPIP275_3341 NZ_AAOS02000003.1 Protein Homology CDS 175316 176689 . + 0 ID=cds-WP_002209171.1;Parent=gene-YPIP275_RS03620;Dbxref=GenBank:WP_002209171.1;Name=WP_002209171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209171.1;locus_tag=YPIP275_RS03620;product=hypothetical protein;protein_id=WP_002209171.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 177033 177320 . - . ID=gene-YPIP275_RS03625;Name=YPIP275_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03625;old_locus_tag=YPIP275_3342 NZ_AAOS02000003.1 Protein Homology CDS 177033 177320 . - 0 ID=cds-WP_002215301.1;Parent=gene-YPIP275_RS03625;Dbxref=GenBank:WP_002215301.1;Name=WP_002215301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215301.1;locus_tag=YPIP275_RS03625;product=type VI secretion system baseplate subunit TssG;protein_id=WP_002215301.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 177522 177719 . - . ID=gene-YPIP275_RS03630;Name=YPIP275_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03630;old_locus_tag=YPIP275_3343 NZ_AAOS02000003.1 GeneMarkS-2+ CDS 177522 177719 . - 0 ID=cds-WP_002209172.1;Parent=gene-YPIP275_RS03630;Dbxref=GenBank:WP_002209172.1;Name=WP_002209172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS03630;product=hypothetical protein;protein_id=WP_002209172.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 177937 179349 . + . ID=gene-YPIP275_RS03640;Name=YPIP275_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03640;old_locus_tag=YPIP275_3344 NZ_AAOS02000003.1 Protein Homology CDS 177937 179349 . + 0 ID=cds-WP_002228121.1;Parent=gene-YPIP275_RS03640;Dbxref=GenBank:WP_002228121.1;Name=WP_002228121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228121.1;locus_tag=YPIP275_RS03640;product=SbcC/MukB-like Walker B domain-containing protein;protein_id=WP_002228121.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 179346 180500 . + . ID=gene-YPIP275_RS03645;Name=YPIP275_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03645;old_locus_tag=YPIP275_3345 NZ_AAOS02000003.1 Protein Homology CDS 179346 180500 . + 0 ID=cds-WP_002209174.1;Parent=gene-YPIP275_RS03645;Dbxref=GenBank:WP_002209174.1;Name=WP_002209174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171972.1;locus_tag=YPIP275_RS03645;product=Wadjet anti-phage system protein JetD domain-containing protein;protein_id=WP_002209174.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 180646 181692 . - . ID=gene-YPIP275_RS03655;Name=YPIP275_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03655;old_locus_tag=YPIP275_3347 NZ_AAOS02000003.1 Protein Homology CDS 180646 181692 . - 0 ID=cds-WP_002209176.1;Parent=gene-YPIP275_RS03655;Dbxref=GenBank:WP_002209176.1;Name=WP_002209176.1;Ontology_term=GO:0004222,GO:0046872;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209176.1;locus_tag=YPIP275_RS03655;product=M48 family metallopeptidase;protein_id=WP_002209176.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 181703 182899 . - . ID=gene-YPIP275_RS03660;Name=YPIP275_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03660;old_locus_tag=YPIP275_3348 NZ_AAOS02000003.1 Protein Homology CDS 181703 182899 . - 0 ID=cds-WP_002209177.1;Parent=gene-YPIP275_RS03660;Dbxref=GenBank:WP_002209177.1;Name=WP_002209177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016598657.1;locus_tag=YPIP275_RS03660;product=YjgN family protein;protein_id=WP_002209177.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 183605 184141 . + . ID=gene-YPIP275_RS03665;Name=YPIP275_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03665;old_locus_tag=YPIP275_3349 NZ_AAOS02000003.1 Protein Homology CDS 183605 184141 . + 0 ID=cds-WP_002209178.1;Parent=gene-YPIP275_RS03665;Dbxref=GenBank:WP_002209178.1;Name=WP_002209178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304625.1;locus_tag=YPIP275_RS03665;product=hypothetical protein;protein_id=WP_002209178.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 184143 185018 . + . ID=gene-YPIP275_RS03670;Name=YPIP275_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03670;old_locus_tag=YPIP275_3351 NZ_AAOS02000003.1 Protein Homology CDS 184143 185018 . + 0 ID=cds-WP_002209179.1;Parent=gene-YPIP275_RS03670;Dbxref=GenBank:WP_002209179.1;Name=WP_002209179.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191658.1;locus_tag=YPIP275_RS03670;product=helix-turn-helix transcriptional regulator;protein_id=WP_002209179.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 185011 185355 . - . ID=gene-YPIP275_RS03675;Name=YPIP275_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03675;old_locus_tag=YPIP275_3350 NZ_AAOS02000003.1 Protein Homology CDS 185011 185355 . - 0 ID=cds-WP_002209180.1;Parent=gene-YPIP275_RS03675;Dbxref=GenBank:WP_002209180.1;Name=WP_002209180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209180.1;locus_tag=YPIP275_RS03675;product=PTS fructose-like transporter subunit IIB;protein_id=WP_002209180.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 185448 185768 . - . ID=gene-YPIP275_RS03680;Name=YPIP275_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03680;old_locus_tag=YPIP275_3352 NZ_AAOS02000003.1 Protein Homology CDS 185448 185768 . - 0 ID=cds-WP_002209181.1;Parent=gene-YPIP275_RS03680;Dbxref=GenBank:WP_002209181.1;Name=WP_002209181.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209181.1;locus_tag=YPIP275_RS03680;product=PTS fructose-like transporter subunit IIB;protein_id=WP_002209181.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 186109 187191 . - . ID=gene-YPIP275_RS03685;Name=YPIP275_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03685;old_locus_tag=YPIP275_3353 NZ_AAOS02000003.1 Protein Homology CDS 186109 187191 . - 0 ID=cds-WP_002209182.1;Parent=gene-YPIP275_RS03685;Dbxref=GenBank:WP_002209182.1;Name=WP_002209182.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016261691.1;locus_tag=YPIP275_RS03685;product=PTS fructose transporter subunit EIIC;protein_id=WP_002209182.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 187556 190114 . + . ID=gene-YPIP275_RS03690;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=YPIP275_RS03690;old_locus_tag=YPIP275_3354 NZ_AAOS02000003.1 Protein Homology CDS 187556 190114 . + 0 ID=cds-WP_002228120.1;Parent=gene-YPIP275_RS03690;Dbxref=GenBank:WP_002228120.1;Name=WP_002228120.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228120.1;locus_tag=YPIP275_RS03690;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_002228120.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 190176 190667 . - . ID=gene-YPIP275_RS03695;Name=YPIP275_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03695;old_locus_tag=YPIP275_3355 NZ_AAOS02000003.1 Protein Homology CDS 190176 190667 . - 0 ID=cds-WP_002209184.1;Parent=gene-YPIP275_RS03695;Dbxref=GenBank:WP_002209184.1;Name=WP_002209184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209184.1;locus_tag=YPIP275_RS03695;product=YjjA family protein;protein_id=WP_002209184.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 190968 191258 . - . ID=gene-YPIP275_RS03700;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=YPIP275_RS03700;old_locus_tag=YPIP275_3356 NZ_AAOS02000003.1 Protein Homology CDS 190968 191258 . - 0 ID=cds-WP_002209186.1;Parent=gene-YPIP275_RS03700;Dbxref=GenBank:WP_002209186.1;Name=WP_002209186.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716509.1;locus_tag=YPIP275_RS03700;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_002209186.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 191322 192197 . - . ID=gene-YPIP275_RS03705;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=YPIP275_RS03705;old_locus_tag=YPIP275_3357 NZ_AAOS02000003.1 Protein Homology CDS 191322 192197 . - 0 ID=cds-WP_002209188.1;Parent=gene-YPIP275_RS03705;Dbxref=GenBank:WP_002209188.1;Name=WP_002209188.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462959.1;locus_tag=YPIP275_RS03705;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_002209188.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 192253 193272 . - . ID=gene-YPIP275_RS03710;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=YPIP275_RS03710;old_locus_tag=YPIP275_3358 NZ_AAOS02000003.1 Protein Homology CDS 192253 193272 . - 0 ID=cds-WP_002209189.1;Parent=gene-YPIP275_RS03710;Dbxref=GenBank:WP_002209189.1;Name=WP_002209189.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310150.1;locus_tag=YPIP275_RS03710;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_002209189.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 193345 194346 . - . ID=gene-YPIP275_RS03715;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=YPIP275_RS03715;old_locus_tag=YPIP275_3359 NZ_AAOS02000003.1 Protein Homology CDS 193345 194346 . - 0 ID=cds-WP_002209190.1;Parent=gene-YPIP275_RS03715;Dbxref=GenBank:WP_002209190.1;Name=WP_002209190.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191663.1;locus_tag=YPIP275_RS03715;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_002209190.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 194343 195398 . - . ID=gene-YPIP275_RS03720;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=YPIP275_RS03720;old_locus_tag=YPIP275_3360 NZ_AAOS02000003.1 Protein Homology CDS 194343 195398 . - 0 ID=cds-WP_002209191.1;Parent=gene-YPIP275_RS03720;Dbxref=GenBank:WP_002209191.1;Name=WP_002209191.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191664.1;locus_tag=YPIP275_RS03720;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_002209191.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 195392 196975 . - . ID=gene-YPIP275_RS03725;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03725;old_locus_tag=YPIP275_3361 NZ_AAOS02000003.1 Protein Homology CDS 195392 196975 . - 0 ID=cds-WP_002209192.1;Parent=gene-YPIP275_RS03725;Dbxref=GenBank:WP_002209192.1;Name=WP_002209192.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209192.1;locus_tag=YPIP275_RS03725;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_002209192.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 197085 197291 . - . ID=gene-YPIP275_RS03730;Name=YPIP275_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03730;old_locus_tag=YPIP275_3362 NZ_AAOS02000003.1 Protein Homology CDS 197085 197291 . - 0 ID=cds-WP_002221620.1;Parent=gene-YPIP275_RS03730;Dbxref=GenBank:WP_002221620.1;Name=WP_002221620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221620.1;locus_tag=YPIP275_RS03730;product=hypothetical protein;protein_id=WP_002221620.1;transl_table=11 NZ_AAOS02000003.1 RefSeq pseudogene 197320 198307 . + . ID=gene-YPIP275_RS03735;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=pseudogene;locus_tag=YPIP275_RS03735;old_locus_tag=YPIP275_3363;pseudo=true NZ_AAOS02000003.1 Protein Homology CDS 197320 198307 . + 0 ID=cds-YPIP275_RS03735;Parent=gene-YPIP275_RS03735;Note=frameshifted;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080622.1;locus_tag=YPIP275_RS03735;product=transcriptional regulator LsrR;pseudo=true;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 198478 200070 . + . ID=gene-YPIP275_RS03740;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=YPIP275_RS03740;old_locus_tag=YPIP275_3364 NZ_AAOS02000003.1 Protein Homology CDS 198478 200070 . + 0 ID=cds-WP_002209194.1;Parent=gene-YPIP275_RS03740;Dbxref=GenBank:WP_002209194.1;Name=WP_002209194.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209194.1;locus_tag=YPIP275_RS03740;product=autoinducer-2 kinase;protein_id=WP_002209194.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 200416 201579 . + . ID=gene-YPIP275_RS03745;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS03745;old_locus_tag=YPIP275_3366 NZ_AAOS02000003.1 Protein Homology CDS 200416 201579 . + 0 ID=cds-WP_002209196.1;Parent=gene-YPIP275_RS03745;Dbxref=GenBank:WP_002209196.1;Name=WP_002209196.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209196.1;locus_tag=YPIP275_RS03745;product=putative lipopolysaccharide heptosyltransferase III;protein_id=WP_002209196.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 201627 202859 . + . ID=gene-YPIP275_RS03750;Name=YPIP275_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03750;old_locus_tag=YPIP275_3367 NZ_AAOS02000003.1 Protein Homology CDS 201627 202859 . + 0 ID=cds-WP_002209197.1;Parent=gene-YPIP275_RS03750;Dbxref=GenBank:WP_002209197.1;Name=WP_002209197.1;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906426.1;locus_tag=YPIP275_RS03750;product=O-antigen ligase family protein;protein_id=WP_002209197.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 203669 203902 . + . ID=gene-YPIP275_RS03760;Name=YPIP275_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03760;old_locus_tag=YPIP275_3368 NZ_AAOS02000003.1 Protein Homology CDS 203669 203902 . + 0 ID=cds-WP_002209198.1;Parent=gene-YPIP275_RS03760;Dbxref=GenBank:WP_002209198.1;Name=WP_002209198.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209198.1;locus_tag=YPIP275_RS03760;product=lipopolysaccharide assembly protein LapA domain-containing protein;protein_id=WP_002209198.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 203954 205036 . + . ID=gene-YPIP275_RS03765;Name=YPIP275_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03765;old_locus_tag=YPIP275_3369 NZ_AAOS02000003.1 Protein Homology CDS 203954 205036 . + 0 ID=cds-WP_002209199.1;Parent=gene-YPIP275_RS03765;Dbxref=GenBank:WP_002209199.1;Name=WP_002209199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159139.1;locus_tag=YPIP275_RS03765;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_002209199.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 205036 208122 . + . ID=gene-YPIP275_RS03770;Name=YPIP275_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03770;old_locus_tag=YPIP275_3370 NZ_AAOS02000003.1 Protein Homology CDS 205036 208122 . + 0 ID=cds-WP_002209200.1;Parent=gene-YPIP275_RS03770;Dbxref=GenBank:WP_002209200.1;Name=WP_002209200.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209200.1;locus_tag=YPIP275_RS03770;product=efflux RND transporter permease subunit;protein_id=WP_002209200.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 208483 208779 . - . ID=gene-YPIP275_RS03780;Name=YPIP275_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03780;old_locus_tag=YPIP275_3371 NZ_AAOS02000003.1 Protein Homology CDS 208483 208779 . - 0 ID=cds-WP_002209201.1;Parent=gene-YPIP275_RS03780;Dbxref=GenBank:WP_002209201.1;Name=WP_002209201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209201.1;locus_tag=YPIP275_RS03780;product=hypothetical protein;protein_id=WP_002209201.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 208962 209225 . - . ID=gene-YPIP275_RS03785;Name=YPIP275_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03785 NZ_AAOS02000003.1 Protein Homology CDS 208962 209225 . - 0 ID=cds-WP_002223942.1;Parent=gene-YPIP275_RS03785;Dbxref=GenBank:WP_002223942.1;Name=WP_002223942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353658.1;locus_tag=YPIP275_RS03785;product=hypothetical protein;protein_id=WP_002223942.1;transl_table=11 NZ_AAOS02000003.1 RefSeq pseudogene 209200 209298 . - . ID=gene-YPIP275_RS29345;Name=YPIP275_RS29345;end_range=209298,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29345;partial=true;pseudo=true NZ_AAOS02000003.1 Protein Homology CDS 209200 209298 . - 0 ID=cds-YPIP275_RS29345;Parent=gene-YPIP275_RS29345;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=209298,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF057723.1;locus_tag=YPIP275_RS29345;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 209618 210703 . + . ID=gene-YPIP275_RS03790;Name=YPIP275_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03790;old_locus_tag=YPIP275_3372 NZ_AAOS02000003.1 Protein Homology CDS 209618 210703 . + 0 ID=cds-WP_002209202.1;Parent=gene-YPIP275_RS03790;Dbxref=GenBank:WP_002209202.1;Name=WP_002209202.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105712.1;locus_tag=YPIP275_RS03790;product=pectinesterase family protein;protein_id=WP_002209202.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 211244 212416 . - . ID=gene-YPIP275_RS03795;Name=YPIP275_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03795;old_locus_tag=YPIP275_3374 NZ_AAOS02000003.1 Protein Homology CDS 211244 212416 . - 0 ID=cds-WP_002209204.1;Parent=gene-YPIP275_RS03795;Dbxref=GenBank:WP_002209204.1;Name=WP_002209204.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906423.1;locus_tag=YPIP275_RS03795;product=GGDEF domain-containing protein;protein_id=WP_002209204.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 212665 213003 . + . ID=gene-YPIP275_RS03800;Name=YPIP275_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03800;old_locus_tag=YPIP275_3375 NZ_AAOS02000003.1 Protein Homology CDS 212665 213003 . + 0 ID=cds-WP_002209205.1;Parent=gene-YPIP275_RS03800;Dbxref=GenBank:WP_002209205.1;Name=WP_002209205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304617.1;locus_tag=YPIP275_RS03800;product=DUF1435 domain-containing protein;protein_id=WP_002209205.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 213173 213259 . - . ID=gene-YPIP275_RS03805;Name=YPIP275_RS03805;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS03805;old_locus_tag=YPIP275_3376 NZ_AAOS02000003.1 tRNAscan-SE tRNA 213173 213259 . - . ID=rna-YPIP275_RS03805;Parent=gene-YPIP275_RS03805;anticodon=(pos:complement(213223..213225));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS03805;product=tRNA-Leu NZ_AAOS02000003.1 tRNAscan-SE exon 213173 213259 . - . ID=exon-YPIP275_RS03805-1;Parent=rna-YPIP275_RS03805;anticodon=(pos:complement(213223..213225));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS03805;product=tRNA-Leu NZ_AAOS02000003.1 RefSeq gene 213516 214559 . - . ID=gene-YPIP275_RS03810;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=YPIP275_RS03810;old_locus_tag=YPIP275_3377 NZ_AAOS02000003.1 Protein Homology CDS 213516 214559 . - 0 ID=cds-WP_002209206.1;Parent=gene-YPIP275_RS03810;Dbxref=GenBank:WP_002209206.1;Name=WP_002209206.1;Ontology_term=GO:0006364,GO:0032259,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815514.1;locus_tag=YPIP275_RS03810;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_002209206.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 214672 215109 . + . ID=gene-YPIP275_RS03815;Name=YPIP275_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03815;old_locus_tag=YPIP275_3378 NZ_AAOS02000003.1 Protein Homology CDS 214672 215109 . + 0 ID=cds-WP_002209207.1;Parent=gene-YPIP275_RS03815;Dbxref=GenBank:WP_002209207.1;Name=WP_002209207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209207.1;locus_tag=YPIP275_RS03815;product=DNA polymerase III subunit psi;protein_id=WP_002209207.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 215054 215497 . + . ID=gene-YPIP275_RS03820;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=YPIP275_RS03820;old_locus_tag=YPIP275_3379 NZ_AAOS02000003.1 Protein Homology CDS 215054 215497 . + 0 ID=cds-WP_002216075.1;Parent=gene-YPIP275_RS03820;Dbxref=GenBank:WP_002216075.1;Name=WP_002216075.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216075.1;locus_tag=YPIP275_RS03820;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_002216075.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 215676 217265 . + . ID=gene-YPIP275_RS03825;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=YPIP275_RS03825;old_locus_tag=YPIP275_3380 NZ_AAOS02000003.1 Protein Homology CDS 215676 217265 . + 0 ID=cds-WP_002209209.1;Parent=gene-YPIP275_RS03825;Dbxref=GenBank:WP_002209209.1;Name=WP_002209209.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080589.1;locus_tag=YPIP275_RS03825;product=peptide chain release factor 3;protein_id=WP_002209209.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 217592 218206 . + . ID=gene-YPIP275_RS03830;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=YPIP275_RS03830;old_locus_tag=YPIP275_3381 NZ_AAOS02000003.1 Protein Homology CDS 217592 218206 . + 0 ID=cds-WP_002209210.1;Parent=gene-YPIP275_RS03830;Dbxref=GenBank:WP_002209210.1;Name=WP_002209210.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906422.1;locus_tag=YPIP275_RS03830;product=molecular chaperone OsmY;protein_id=WP_002209210.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 218373 218534 . + . ID=gene-YPIP275_RS03835;Name=YPIP275_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03835;old_locus_tag=YPIP275_3382 NZ_AAOS02000003.1 Protein Homology CDS 218373 218534 . + 0 ID=cds-WP_002209211.1;Parent=gene-YPIP275_RS03835;Dbxref=GenBank:WP_002209211.1;Name=WP_002209211.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191683.1;locus_tag=YPIP275_RS03835;product=DUF1328 domain-containing protein;protein_id=WP_002209211.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 218608 219879 . + . ID=gene-YPIP275_RS03840;Name=YPIP275_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03840;old_locus_tag=YPIP275_3383 NZ_AAOS02000003.1 Protein Homology CDS 218608 219879 . + 0 ID=cds-WP_002216076.1;Parent=gene-YPIP275_RS03840;Dbxref=GenBank:WP_002216076.1;Name=WP_002216076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016583114.1;locus_tag=YPIP275_RS03840;product=patatin-like phospholipase family protein;protein_id=WP_002216076.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 219916 220704 . + . ID=gene-YPIP275_RS03845;Name=YPIP275_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03845;old_locus_tag=YPIP275_3384 NZ_AAOS02000003.1 Protein Homology CDS 219916 220704 . + 0 ID=cds-WP_002228116.1;Parent=gene-YPIP275_RS03845;Dbxref=GenBank:WP_002228116.1;Name=WP_002228116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228116.1;locus_tag=YPIP275_RS03845;product=metal-dependent hydrolase;protein_id=WP_002228116.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 221239 222510 . + . ID=gene-YPIP275_RS03850;Name=YPIP275_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03850;old_locus_tag=YPIP275_3385 NZ_AAOS02000003.1 Protein Homology CDS 221239 222510 . + 0 ID=cds-WP_002209214.1;Parent=gene-YPIP275_RS03850;Dbxref=GenBank:WP_002209214.1;Name=WP_002209214.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084018.1;locus_tag=YPIP275_RS03850;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_002209214.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 223086 223883 . + . ID=gene-YPIP275_RS03855;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=YPIP275_RS03855;old_locus_tag=YPIP275_3386 NZ_AAOS02000003.1 Protein Homology CDS 223086 223883 . + 0 ID=cds-WP_002216078.1;Parent=gene-YPIP275_RS03855;Dbxref=GenBank:WP_002216078.1;Name=WP_002216078.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716349.1;locus_tag=YPIP275_RS03855;product=deoxyribose-phosphate aldolase;protein_id=WP_002216078.1;transl_table=11 NZ_AAOS02000003.1 RefSeq pseudogene 224004 225322 . + . ID=gene-YPIP275_RS03865;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=pseudogene;locus_tag=YPIP275_RS03865;old_locus_tag=YPIP275_3387;pseudo=true NZ_AAOS02000003.1 Protein Homology CDS 224004 225322 . + 0 ID=cds-YPIP275_RS03865;Parent=gene-YPIP275_RS03865;Note=frameshifted;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019454991.1;locus_tag=YPIP275_RS03865;product=thymidine phosphorylase;pseudo=true;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 225454 226677 . + . ID=gene-YPIP275_RS03870;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=YPIP275_RS03870;old_locus_tag=YPIP275_3388 NZ_AAOS02000003.1 Protein Homology CDS 225454 226677 . + 0 ID=cds-WP_002209216.1;Parent=gene-YPIP275_RS03870;Dbxref=GenBank:WP_002209216.1;Name=WP_002209216.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191688.1;locus_tag=YPIP275_RS03870;product=phosphopentomutase;protein_id=WP_002209216.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 226802 227521 . + . ID=gene-YPIP275_RS03875;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=YPIP275_RS03875;old_locus_tag=YPIP275_3389 NZ_AAOS02000003.1 Protein Homology CDS 226802 227521 . + 0 ID=cds-WP_002209217.1;Parent=gene-YPIP275_RS03875;Dbxref=GenBank:WP_002209217.1;Name=WP_002209217.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209217.1;locus_tag=YPIP275_RS03875;product=purine-nucleoside phosphorylase;protein_id=WP_002209217.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 227633 228334 . - . ID=gene-YPIP275_RS03880;Name=YPIP275_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03880;old_locus_tag=YPIP275_3390 NZ_AAOS02000003.1 Protein Homology CDS 227633 228334 . - 0 ID=cds-WP_002209218.1;Parent=gene-YPIP275_RS03880;Dbxref=GenBank:WP_002209218.1;Name=WP_002209218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209218.1;locus_tag=YPIP275_RS03880;product=YtjB family periplasmic protein;protein_id=WP_002209218.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 228566 229546 . + . ID=gene-YPIP275_RS03885;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=YPIP275_RS03885;old_locus_tag=YPIP275_3391 NZ_AAOS02000003.1 Protein Homology CDS 228566 229546 . + 0 ID=cds-WP_002209219.1;Parent=gene-YPIP275_RS03885;Dbxref=GenBank:WP_002209219.1;Name=WP_002209219.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304614.1;locus_tag=YPIP275_RS03885;product=phosphoserine phosphatase;protein_id=WP_002209219.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 229634 231016 . + . ID=gene-YPIP275_RS03890;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03890;old_locus_tag=YPIP275_3392 NZ_AAOS02000003.1 Protein Homology CDS 229634 231016 . + 0 ID=cds-WP_002209220.1;Parent=gene-YPIP275_RS03890;Dbxref=GenBank:WP_002209220.1;Name=WP_002209220.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463435.1;locus_tag=YPIP275_RS03890;product=DNA repair protein RadA;protein_id=WP_002209220.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 231175 232446 . + . ID=gene-YPIP275_RS03895;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=YPIP275_RS03895;old_locus_tag=YPIP275_3393 NZ_AAOS02000003.1 Protein Homology CDS 231175 232446 . + 0 ID=cds-WP_002209221.1;Parent=gene-YPIP275_RS03895;Dbxref=GenBank:WP_002209221.1;Name=WP_002209221.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105707.1;locus_tag=YPIP275_RS03895;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_002209221.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 232603 233733 . + . ID=gene-YPIP275_RS03900;Name=YPIP275_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03900;old_locus_tag=YPIP275_3394 NZ_AAOS02000003.1 Protein Homology CDS 232603 233733 . + 0 ID=cds-WP_002218755.1;Parent=gene-YPIP275_RS03900;Dbxref=GenBank:WP_002218755.1;Name=WP_002218755.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218755.1;locus_tag=YPIP275_RS03900;product=Fic family protein;protein_id=WP_002218755.1;transl_table=11 NZ_AAOS02000003.1 RefSeq pseudogene 233879 235542 . - . ID=gene-YPIP275_RS03905;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=pseudogene;locus_tag=YPIP275_RS03905;old_locus_tag=YPIP275_3395;pseudo=true NZ_AAOS02000003.1 Protein Homology CDS 233879 235542 . - 0 ID=cds-YPIP275_RS03905;Parent=gene-YPIP275_RS03905;Note=frameshifted;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313376.1;locus_tag=YPIP275_RS03905;product=energy-dependent translational throttle protein EttA;pseudo=true;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 235725 236231 . - . ID=gene-YPIP275_RS03910;Name=yfiB;gbkey=Gene;gene=yfiB;gene_biotype=protein_coding;locus_tag=YPIP275_RS03910;old_locus_tag=YPIP275_3396 NZ_AAOS02000003.1 Protein Homology CDS 235725 236231 . - 0 ID=cds-WP_002215967.1;Parent=gene-YPIP275_RS03910;Dbxref=GenBank:WP_002215967.1;Name=WP_002215967.1;Ontology_term=GO:0007165,GO:0009279;gbkey=CDS;gene=yfiB;go_component=cell outer membrane|0009279||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191692.1;locus_tag=YPIP275_RS03910;product=outer membrane lipoprotein YfiB;protein_id=WP_002215967.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 236237 237538 . - . ID=gene-YPIP275_RS03915;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;gene_synonym=yfiN;locus_tag=YPIP275_RS03915;old_locus_tag=YPIP275_3397 NZ_AAOS02000003.1 Protein Homology CDS 236237 237538 . - 0 ID=cds-WP_002209224.1;Parent=gene-YPIP275_RS03915;Dbxref=GenBank:WP_002209224.1;Name=WP_002209224.1;Ontology_term=GO:0007165,GO:0052621,GO:0005886;gbkey=CDS;gene=dgcN;go_component=plasma membrane|0005886||IEA;go_function=diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209224.1;locus_tag=YPIP275_RS03915;product=diguanylate cyclase DgcN/YfiN;protein_id=WP_002209224.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 237535 238158 . - . ID=gene-YPIP275_RS03920;Name=yfiR;gbkey=Gene;gene=yfiR;gene_biotype=protein_coding;locus_tag=YPIP275_RS03920;old_locus_tag=YPIP275_3398 NZ_AAOS02000003.1 Protein Homology CDS 237535 238158 . - 0 ID=cds-WP_002209225.1;Parent=gene-YPIP275_RS03920;Dbxref=GenBank:WP_002209225.1;Name=WP_002209225.1;Ontology_term=GO:0007165,GO:0030288;gbkey=CDS;gene=yfiR;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209225.1;locus_tag=YPIP275_RS03920;product=regulatory sequestration protein YfiR;protein_id=WP_002209225.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 238533 241259 . - . ID=gene-YPIP275_RS03925;Name=YPIP275_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03925;old_locus_tag=YPIP275_3399 NZ_AAOS02000003.1 Protein Homology CDS 238533 241259 . - 0 ID=cds-WP_002209226.1;Parent=gene-YPIP275_RS03925;Dbxref=GenBank:WP_002209226.1;Name=WP_002209226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209226.1;locus_tag=YPIP275_RS03925;product=cation-transporting P-type ATPase;protein_id=WP_002209226.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 241829 243748 . + . ID=gene-YPIP275_RS03930;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=YPIP275_RS03930;old_locus_tag=YPIP275_3400 NZ_AAOS02000003.1 Protein Homology CDS 241829 243748 . + 0 ID=cds-WP_002209227.1;Parent=gene-YPIP275_RS03930;Dbxref=GenBank:WP_002209227.1;Name=WP_002209227.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209227.1;locus_tag=YPIP275_RS03930;product=murein transglycosylase;protein_id=WP_002209227.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 243984 244376 . + . ID=gene-YPIP275_RS03935;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=YPIP275_RS03935;old_locus_tag=YPIP275_3402 NZ_AAOS02000003.1 Protein Homology CDS 243984 244376 . + 0 ID=cds-WP_002209228.1;Parent=gene-YPIP275_RS03935;Dbxref=GenBank:WP_002209228.1;Name=WP_002209228.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105706.1;locus_tag=YPIP275_RS03935;product=trp operon repressor;protein_id=WP_002209228.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 244373 244915 . - . ID=gene-YPIP275_RS03940;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=YPIP275_RS03940;old_locus_tag=YPIP275_3401 NZ_AAOS02000003.1 Protein Homology CDS 244373 244915 . - 0 ID=cds-WP_002209229.1;Parent=gene-YPIP275_RS03940;Dbxref=GenBank:WP_002209229.1;Name=WP_002209229.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105705.1;locus_tag=YPIP275_RS03940;product=inosine/xanthosine triphosphatase;protein_id=WP_002209229.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 245009 245656 . + . ID=gene-YPIP275_RS03945;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=YPIP275_RS03945;old_locus_tag=YPIP275_3404 NZ_AAOS02000003.1 Protein Homology CDS 245009 245656 . + 0 ID=cds-WP_002209230.1;Parent=gene-YPIP275_RS03945;Dbxref=GenBank:WP_002209230.1;Name=WP_002209230.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225003.1;locus_tag=YPIP275_RS03945;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_002209230.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 245653 246519 . - . ID=gene-YPIP275_RS03950;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03950;old_locus_tag=YPIP275_3403 NZ_AAOS02000003.1 Protein Homology CDS 245653 246519 . - 0 ID=cds-WP_002209231.1;Parent=gene-YPIP275_RS03950;Dbxref=GenBank:WP_002209231.1;Name=WP_002209231.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080567.1;locus_tag=YPIP275_RS03950;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_002209231.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 246745 247212 . + . ID=gene-YPIP275_RS03955;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03955;old_locus_tag=YPIP275_3405 NZ_AAOS02000003.1 Protein Homology CDS 246745 247212 . + 0 ID=cds-WP_002209232.1;Parent=gene-YPIP275_RS03955;Dbxref=GenBank:WP_002209232.1;Name=WP_002209232.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209232.1;locus_tag=YPIP275_RS03955;product=protein CreA;protein_id=WP_002209232.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 247386 248102 . - . ID=gene-YPIP275_RS03960;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03960;old_locus_tag=YPIP275_3406 NZ_AAOS02000003.1 Protein Homology CDS 247386 248102 . - 0 ID=cds-WP_002209234.1;Parent=gene-YPIP275_RS03960;Dbxref=GenBank:WP_002209234.1;Name=WP_002209234.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225009.1;locus_tag=YPIP275_RS03960;product=two-component system response regulator ArcA;protein_id=WP_002209234.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 248205 248345 . + . ID=gene-YPIP275_RS28430;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=YPIP275_RS28430 NZ_AAOS02000003.1 Protein Homology CDS 248205 248345 . + 0 ID=cds-WP_002231506.1;Parent=gene-YPIP275_RS28430;Dbxref=GenBank:WP_002231506.1;Name=WP_002231506.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231506.1;locus_tag=YPIP275_RS28430;product=YjjY family protein;protein_id=WP_002231506.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 249019 249087 . + . ID=gene-YPIP275_RS26815;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=YPIP275_RS26815 NZ_AAOS02000003.1 Protein Homology CDS 249019 249087 . + 0 ID=cds-WP_002231504.1;Parent=gene-YPIP275_RS26815;Dbxref=GenBank:WP_002231504.1;Name=WP_002231504.1;Ontology_term=GO:0009088,GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=L-threonine biosynthetic process|0009088||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: protein motif:HMM:TIGR02077.1;locus_tag=YPIP275_RS26815;product=thr operon leader peptide;protein_id=WP_002231504.1;transl_table=11 NZ_AAOS02000003.1 cmsearch sequence_feature 249026 249144 . + . ID=id-NZ_AAOS02000003.1:249026..249144;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_AAOS02000003.1 RefSeq gene 249206 251665 . + . ID=gene-YPIP275_RS03965;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03965;old_locus_tag=YPIP275_3408 NZ_AAOS02000003.1 Protein Homology CDS 249206 251665 . + 0 ID=cds-WP_002209237.1;Parent=gene-YPIP275_RS03965;Dbxref=GenBank:WP_002209237.1;Name=WP_002209237.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=YPIP275_RS03965;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_002209237.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 251668 252597 . + . ID=gene-YPIP275_RS03970;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=YPIP275_RS03970;old_locus_tag=YPIP275_3409 NZ_AAOS02000003.1 Protein Homology CDS 251668 252597 . + 0 ID=cds-WP_002209238.1;Parent=gene-YPIP275_RS03970;Dbxref=GenBank:WP_002209238.1;Name=WP_002209238.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004715920.1;locus_tag=YPIP275_RS03970;product=homoserine kinase;protein_id=WP_002209238.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 252601 253890 . + . ID=gene-YPIP275_RS03975;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=YPIP275_RS03975;old_locus_tag=YPIP275_3410 NZ_AAOS02000003.1 Protein Homology CDS 252601 253890 . + 0 ID=cds-WP_002209239.1;Parent=gene-YPIP275_RS03975;Dbxref=GenBank:WP_002209239.1;Name=WP_002209239.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005159027.1;locus_tag=YPIP275_RS03975;product=threonine synthase;protein_id=WP_002209239.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 254707 255483 . - . ID=gene-YPIP275_RS03980;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS03980;old_locus_tag=YPIP275_3411 NZ_AAOS02000003.1 Protein Homology CDS 254707 255483 . - 0 ID=cds-WP_002209240.1;Parent=gene-YPIP275_RS03980;Dbxref=GenBank:WP_002209240.1;Name=WP_002209240.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209240.1;locus_tag=YPIP275_RS03980;product=peroxide stress protein YaaA;protein_id=WP_002209240.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 255766 255948 . + . ID=gene-YPIP275_RS26825;Name=YPIP275_RS26825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26825 NZ_AAOS02000003.1 Protein Homology CDS 255766 255948 . + 0 ID=cds-WP_002216008.1;Parent=gene-YPIP275_RS26825;Dbxref=GenBank:WP_002216008.1;Name=WP_002216008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216008.1;locus_tag=YPIP275_RS26825;product=hypothetical protein;protein_id=WP_002216008.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 256015 256968 . + . ID=gene-YPIP275_RS03985;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=YPIP275_RS03985;old_locus_tag=YPIP275_3412 NZ_AAOS02000003.1 Protein Homology CDS 256015 256968 . + 0 ID=cds-WP_002209241.1;Parent=gene-YPIP275_RS03985;Dbxref=GenBank:WP_002209241.1;Name=WP_002209241.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457867.1;locus_tag=YPIP275_RS03985;product=transaldolase;protein_id=WP_002209241.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 257256 257843 . + . ID=gene-YPIP275_RS03990;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=YPIP275_RS03990;old_locus_tag=YPIP275_3414 NZ_AAOS02000003.1 Protein Homology CDS 257256 257843 . + 0 ID=cds-WP_002209243.1;Parent=gene-YPIP275_RS03990;Dbxref=GenBank:WP_002209243.1;Name=WP_002209243.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308036.1;locus_tag=YPIP275_RS03990;product=molybdopterin adenylyltransferase;protein_id=WP_002209243.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 257971 259359 . + . ID=gene-YPIP275_RS03995;Name=YPIP275_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS03995;old_locus_tag=YPIP275_3415 NZ_AAOS02000003.1 Protein Homology CDS 257971 259359 . + 0 ID=cds-WP_002209244.1;Parent=gene-YPIP275_RS03995;Dbxref=GenBank:WP_002209244.1;Name=WP_002209244.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209244.1;locus_tag=YPIP275_RS03995;product=MFS transporter;protein_id=WP_002209244.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 259429 261876 . - . ID=gene-YPIP275_RS04000;Name=YPIP275_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS04000;old_locus_tag=YPIP275_3416 NZ_AAOS02000003.1 Protein Homology CDS 259429 261876 . - 0 ID=cds-WP_002209245.1;Parent=gene-YPIP275_RS04000;Dbxref=GenBank:WP_002209245.1;Name=WP_002209245.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209245.1;locus_tag=YPIP275_RS04000;product=GNAT family N-acetyltransferase;protein_id=WP_002209245.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 262165 262776 . - . ID=gene-YPIP275_RS04005;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=YPIP275_RS04005;old_locus_tag=YPIP275_3417 NZ_AAOS02000003.1 Protein Homology CDS 262165 262776 . - 0 ID=cds-WP_002209246.1;Parent=gene-YPIP275_RS04005;Dbxref=GenBank:WP_002209246.1;Name=WP_002209246.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191699.1;locus_tag=YPIP275_RS04005;product=acetate uptake transporter;protein_id=WP_002209246.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 263150 265060 . + . ID=gene-YPIP275_RS04010;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=YPIP275_RS04010;old_locus_tag=YPIP275_3418 NZ_AAOS02000003.1 Protein Homology CDS 263150 265060 . + 0 ID=cds-WP_002209248.1;Parent=gene-YPIP275_RS04010;Dbxref=GenBank:WP_002209248.1;Name=WP_002209248.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=YPIP275_RS04010;product=molecular chaperone DnaK;protein_id=WP_002209248.1;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 265172 266311 . + . ID=gene-YPIP275_RS04015;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS04015;old_locus_tag=YPIP275_3419 NZ_AAOS02000003.1 Protein Homology CDS 265172 266311 . + 0 ID=cds-WP_002209249.1;Parent=gene-YPIP275_RS04015;Dbxref=GenBank:WP_002209249.1;Name=WP_002209249.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005145.1;locus_tag=YPIP275_RS04015;product=molecular chaperone DnaJ;protein_id=WP_002209249.1;transl_table=11 NZ_AAOS02000003.1 RefSeq pseudogene 266554 267739 . + . ID=gene-YPIP275_RS04020;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=pseudogene;locus_tag=YPIP275_RS04020;old_locus_tag=YPIP275_3421;pseudo=true NZ_AAOS02000003.1 Protein Homology CDS 266554 267739 . + 0 ID=cds-YPIP275_RS04020;Parent=gene-YPIP275_RS04020;Note=frameshifted;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220711.1;locus_tag=YPIP275_RS04020;product=Na+/H+ antiporter NhaA;pseudo=true;transl_table=11 NZ_AAOS02000003.1 RefSeq gene 267869 268581 . + . ID=gene-YPIP275_RS04025;Name=nhaR;end_range=268581,.;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=YPIP275_RS04025;old_locus_tag=YPIP275_3423;partial=true NZ_AAOS02000003.1 Protein Homology CDS 267869 268581 . + 0 ID=cds-WP_002209251.1;Parent=gene-YPIP275_RS04025;Dbxref=GenBank:WP_002209251.1;Name=WP_002209251.1;Ontology_term=GO:0006355,GO:0003700;end_range=268581,.;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220713.1;locus_tag=YPIP275_RS04025;partial=true;product=transcriptional activator NhaR;protein_id=WP_002209251.1;transl_table=11 ##sequence-region NZ_AAOS02000002.1 1 276133 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000002.1 RefSeq region 1 276133 . + . ID=NZ_AAOS02000002.1:1..276133;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000002.1 RefSeq gene 40 822 . - . ID=gene-YPIP275_RS01470;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS01470;old_locus_tag=YPIP275_4702 NZ_AAOS02000002.1 Protein Homology CDS 40 822 . - 0 ID=cds-WP_001317493.1-46;Parent=gene-YPIP275_RS01470;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS01470;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 819 1841 . - . ID=gene-YPIP275_RS01475;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01475;old_locus_tag=YPIP275_4703 NZ_AAOS02000002.1 Protein Homology CDS 819 1841 . - 0 ID=cds-WP_000255944.1-40;Parent=gene-YPIP275_RS01475;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS01475;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000002.1 RefSeq pseudogene 1915 2202 . + . ID=gene-YPIP275_RS01480;Name=YPIP275_RS01480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS01480;old_locus_tag=YPIP275_4704;partial=true;pseudo=true;start_range=.,1915 NZ_AAOS02000002.1 Protein Homology CDS 1915 2202 . + 0 ID=cds-YPIP275_RS01480;Parent=gene-YPIP275_RS01480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=YPIP275_RS01480;partial=true;product=transporter substrate-binding domain-containing protein;pseudo=true;start_range=.,1915;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 2329 3459 . - . ID=gene-YPIP275_RS01485;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=YPIP275_RS01485;old_locus_tag=YPIP275_4705 NZ_AAOS02000002.1 Protein Homology CDS 2329 3459 . - 0 ID=cds-WP_002208756.1;Parent=gene-YPIP275_RS01485;Dbxref=GenBank:WP_002208756.1;Name=WP_002208756.1;Ontology_term=GO:0000154,GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA,RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208756.1;locus_tag=YPIP275_RS01485;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_002208756.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 3543 4007 . - . ID=gene-YPIP275_RS01490;Name=YPIP275_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01490;old_locus_tag=YPIP275_4706 NZ_AAOS02000002.1 Protein Homology CDS 3543 4007 . - 0 ID=cds-WP_002208757.1;Parent=gene-YPIP275_RS01490;Dbxref=GenBank:WP_002208757.1;Name=WP_002208757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192038.1;locus_tag=YPIP275_RS01490;product=YbjO family protein;protein_id=WP_002208757.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 4132 4977 . - . ID=gene-YPIP275_RS01495;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=YPIP275_RS01495;old_locus_tag=YPIP275_4707 NZ_AAOS02000002.1 Protein Homology CDS 4132 4977 . - 0 ID=cds-WP_002208758.1;Parent=gene-YPIP275_RS01495;Dbxref=GenBank:WP_002208758.1;Name=WP_002208758.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004965061.1;locus_tag=YPIP275_RS01495;product=putrescine ABC transporter permease PotI;protein_id=WP_002208758.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 4974 5939 . - . ID=gene-YPIP275_RS01500;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=YPIP275_RS01500;old_locus_tag=YPIP275_4708 NZ_AAOS02000002.1 Protein Homology CDS 4974 5939 . - 0 ID=cds-WP_002208759.1;Parent=gene-YPIP275_RS01500;Dbxref=GenBank:WP_002208759.1;Name=WP_002208759.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192037.1;locus_tag=YPIP275_RS01500;product=putrescine ABC transporter permease PotH;protein_id=WP_002208759.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 5964 7097 . - . ID=gene-YPIP275_RS01505;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=YPIP275_RS01505;old_locus_tag=YPIP275_4709 NZ_AAOS02000002.1 Protein Homology CDS 5964 7097 . - 0 ID=cds-WP_002208760.1;Parent=gene-YPIP275_RS01505;Dbxref=GenBank:WP_002208760.1;Name=WP_002208760.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717281.1;locus_tag=YPIP275_RS01505;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_002208760.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 7268 8377 . - . ID=gene-YPIP275_RS01510;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=YPIP275_RS01510;old_locus_tag=YPIP275_4711 NZ_AAOS02000002.1 Protein Homology CDS 7268 8377 . - 0 ID=cds-WP_002208762.1;Parent=gene-YPIP275_RS01510;Dbxref=GenBank:WP_002208762.1;Name=WP_002208762.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308961.1;locus_tag=YPIP275_RS01510;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_002208762.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 8895 9380 . - . ID=gene-YPIP275_RS01515;Name=YPIP275_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01515;old_locus_tag=YPIP275_4712 NZ_AAOS02000002.1 Protein Homology CDS 8895 9380 . - 0 ID=cds-WP_002208763.1;Parent=gene-YPIP275_RS01515;Dbxref=GenBank:WP_002208763.1;Name=WP_002208763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208763.1;locus_tag=YPIP275_RS01515;product=YbjN domain-containing protein;protein_id=WP_002208763.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 9522 9836 . - . ID=gene-YPIP275_RS01525;Name=YPIP275_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01525;old_locus_tag=YPIP275_4713 NZ_AAOS02000002.1 Protein Homology CDS 9522 9836 . - 0 ID=cds-WP_002216036.1;Parent=gene-YPIP275_RS01525;Dbxref=GenBank:WP_002216036.1;Name=WP_002216036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216036.1;locus_tag=YPIP275_RS01525;product=YbjC family protein;protein_id=WP_002216036.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 10299 10562 . + . ID=gene-YPIP275_RS01530;Name=YPIP275_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01530;old_locus_tag=YPIP275_4714 NZ_AAOS02000002.1 Protein Homology CDS 10299 10562 . + 0 ID=cds-WP_002208765.1;Parent=gene-YPIP275_RS01530;Dbxref=GenBank:WP_002208765.1;Name=WP_002208765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208765.1;locus_tag=YPIP275_RS01530;product=GrxA family glutaredoxin;protein_id=WP_002208765.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 10972 12660 . + . ID=gene-YPIP275_RS01535;Name=YPIP275_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01535;old_locus_tag=YPIP275_4715 NZ_AAOS02000002.1 Protein Homology CDS 10972 12660 . + 0 ID=cds-WP_002208766.1;Parent=gene-YPIP275_RS01535;Dbxref=GenBank:WP_002208766.1;Name=WP_002208766.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016678434.1;locus_tag=YPIP275_RS01535;product=aspartate:alanine antiporter;protein_id=WP_002208766.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 13137 13808 . + . ID=gene-YPIP275_RS01540;Name=YPIP275_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01540;old_locus_tag=YPIP275_4716 NZ_AAOS02000002.1 Protein Homology CDS 13137 13808 . + 0 ID=cds-WP_002208767.1;Parent=gene-YPIP275_RS01540;Dbxref=GenBank:WP_002208767.1;Name=WP_002208767.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208767.1;locus_tag=YPIP275_RS01540;product=phosphatase PAP2 family protein;protein_id=WP_002208767.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 13808 14413 . + . ID=gene-YPIP275_RS01545;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=YPIP275_RS01545;old_locus_tag=YPIP275_4717 NZ_AAOS02000002.1 Protein Homology CDS 13808 14413 . + 0 ID=cds-WP_002208768.1;Parent=gene-YPIP275_RS01545;Dbxref=GenBank:WP_002208768.1;Name=WP_002208768.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208768.1;locus_tag=YPIP275_RS01545;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_002208768.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 14671 15342 . + . ID=gene-YPIP275_RS01550;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=YPIP275_RS01550;old_locus_tag=YPIP275_4718 NZ_AAOS02000002.1 Protein Homology CDS 14671 15342 . + 0 ID=cds-WP_002208769.1;Parent=gene-YPIP275_RS01550;Dbxref=GenBank:WP_002208769.1;Name=WP_002208769.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229439.1;locus_tag=YPIP275_RS01550;product=deoxyribose-phosphate aldolase;protein_id=WP_002208769.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 15572 16336 . + . ID=gene-YPIP275_RS01555;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=YPIP275_RS01555;old_locus_tag=YPIP275_4719 NZ_AAOS02000002.1 Protein Homology CDS 15572 16336 . + 0 ID=cds-WP_002208770.1;Parent=gene-YPIP275_RS01555;Dbxref=GenBank:WP_002208770.1;Name=WP_002208770.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208770.1;locus_tag=YPIP275_RS01555;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_002208770.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 17436 18737 . + . ID=gene-YPIP275_RS01560;Name=YPIP275_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01560;old_locus_tag=YPIP275_4721 NZ_AAOS02000002.1 Protein Homology CDS 17436 18737 . + 0 ID=cds-WP_002215443.1;Parent=gene-YPIP275_RS01560;Dbxref=GenBank:WP_002215443.1;Name=WP_002215443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192035.1;locus_tag=YPIP275_RS01560;product=HAAAP family serine/threonine permease;protein_id=WP_002215443.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 18952 19410 . + . ID=gene-YPIP275_RS01570;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01570;old_locus_tag=YPIP275_4722 NZ_AAOS02000002.1 Protein Homology CDS 18952 19410 . + 0 ID=cds-WP_002213759.1-29;Parent=gene-YPIP275_RS01570;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS01570;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 19887 21092 . - . ID=gene-YPIP275_RS01575;Name=YPIP275_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01575;old_locus_tag=YPIP275_4724 NZ_AAOS02000002.1 Protein Homology CDS 19887 21092 . - 0 ID=cds-WP_002208774.1;Parent=gene-YPIP275_RS01575;Dbxref=GenBank:WP_002208774.1;Name=WP_002208774.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413598.1;locus_tag=YPIP275_RS01575;product=serine hydrolase;protein_id=WP_002208774.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 21427 22098 . - . ID=gene-YPIP275_RS01580;Name=YPIP275_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01580;old_locus_tag=YPIP275_4725 NZ_AAOS02000002.1 Protein Homology CDS 21427 22098 . - 0 ID=cds-WP_002208775.1;Parent=gene-YPIP275_RS01580;Dbxref=GenBank:WP_002208775.1;Name=WP_002208775.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208775.1;locus_tag=YPIP275_RS01580;product=methionine ABC transporter permease;protein_id=WP_002208775.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 22095 23081 . - . ID=gene-YPIP275_RS01585;Name=YPIP275_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01585;old_locus_tag=YPIP275_4726 NZ_AAOS02000002.1 Protein Homology CDS 22095 23081 . - 0 ID=cds-WP_002208776.1;Parent=gene-YPIP275_RS01585;Dbxref=GenBank:WP_002208776.1;Name=WP_002208776.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208776.1;locus_tag=YPIP275_RS01585;product=methionine ABC transporter ATP-binding protein;protein_id=WP_002208776.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 23078 23902 . - . ID=gene-YPIP275_RS01590;Name=YPIP275_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01590;old_locus_tag=YPIP275_4727 NZ_AAOS02000002.1 Protein Homology CDS 23078 23902 . - 0 ID=cds-WP_002208777.1;Parent=gene-YPIP275_RS01590;Dbxref=GenBank:WP_002208777.1;Name=WP_002208777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304315.1;locus_tag=YPIP275_RS01590;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_002208777.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 24130 25197 . - . ID=gene-YPIP275_RS01595;Name=YPIP275_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01595;old_locus_tag=YPIP275_4728 NZ_AAOS02000002.1 Protein Homology CDS 24130 25197 . - 0 ID=cds-WP_002208778.1;Parent=gene-YPIP275_RS01595;Dbxref=GenBank:WP_002208778.1;Name=WP_002208778.1;Ontology_term=GO:0005506,GO:0046872,GO:0051213;gbkey=CDS;go_function=iron ion binding|0005506||IEA,metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192033.1;locus_tag=YPIP275_RS01595;product=isopenicillin N synthase family dioxygenase;protein_id=WP_002208778.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 25684 26334 . + . ID=gene-YPIP275_RS01600;Name=YPIP275_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01600;old_locus_tag=YPIP275_4730 NZ_AAOS02000002.1 Protein Homology CDS 25684 26334 . + 0 ID=cds-WP_002215448.1;Parent=gene-YPIP275_RS01600;Dbxref=GenBank:WP_002215448.1;Name=WP_002215448.1;Ontology_term=GO:0016311,GO:0016791,GO:0046872;gbkey=CDS;go_function=phosphatase activity|0016791||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215448.1;locus_tag=YPIP275_RS01600;product=HAD family hydrolase;protein_id=WP_002215448.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 26488 27108 . + . ID=gene-YPIP275_RS01605;Name=YPIP275_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01605;old_locus_tag=YPIP275_4732 NZ_AAOS02000002.1 Protein Homology CDS 26488 27108 . + 0 ID=cds-WP_002208781.1;Parent=gene-YPIP275_RS01605;Dbxref=GenBank:WP_002208781.1;Name=WP_002208781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208781.1;locus_tag=YPIP275_RS01605;product=glutathione S-transferase;protein_id=WP_002208781.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 27378 29375 . - . ID=gene-YPIP275_RS01610;Name=YPIP275_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01610;old_locus_tag=YPIP275_4733 NZ_AAOS02000002.1 Protein Homology CDS 27378 29375 . - 0 ID=cds-WP_002208782.1;Parent=gene-YPIP275_RS01610;Dbxref=GenBank:WP_002208782.1;Name=WP_002208782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016673871.1;locus_tag=YPIP275_RS01610;product=ligand-gated channel protein;protein_id=WP_002208782.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 29635 30423 . - . ID=gene-YPIP275_RS01615;Name=YPIP275_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01615;old_locus_tag=YPIP275_4734 NZ_AAOS02000002.1 Protein Homology CDS 29635 30423 . - 0 ID=cds-WP_002208783.1;Parent=gene-YPIP275_RS01615;Dbxref=GenBank:WP_002208783.1;Name=WP_002208783.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208783.1;locus_tag=YPIP275_RS01615;product=ABC transporter ATP-binding protein;protein_id=WP_002208783.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 30420 31502 . - . ID=gene-YPIP275_RS01620;Name=YPIP275_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01620;old_locus_tag=YPIP275_4735 NZ_AAOS02000002.1 Protein Homology CDS 30420 31502 . - 0 ID=cds-WP_002215451.1;Parent=gene-YPIP275_RS01620;Dbxref=GenBank:WP_002215451.1;Name=WP_002215451.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673046.1;locus_tag=YPIP275_RS01620;product=FecCD family ABC transporter permease;protein_id=WP_002215451.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 31697 32842 . - . ID=gene-YPIP275_RS01625;Name=yiuA;gbkey=Gene;gene=yiuA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01625;old_locus_tag=YPIP275_4736 NZ_AAOS02000002.1 Protein Homology CDS 31697 32842 . - 0 ID=cds-WP_002208785.1;Parent=gene-YPIP275_RS01625;Dbxref=GenBank:WP_002208785.1;Name=WP_002208785.1;gbkey=CDS;gene=yiuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208785.1;locus_tag=YPIP275_RS01625;product=iron-siderophore ABC transporter substrate-binding protein YiuA;protein_id=WP_002208785.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 33128 34639 . - . ID=gene-YPIP275_RS01630;Name=YPIP275_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01630;old_locus_tag=YPIP275_4737 NZ_AAOS02000002.1 Protein Homology CDS 33128 34639 . - 0 ID=cds-WP_002208786.1;Parent=gene-YPIP275_RS01630;Dbxref=GenBank:WP_002208786.1;Name=WP_002208786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208786.1;locus_tag=YPIP275_RS01630;product=amino acid permease;protein_id=WP_002208786.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 34897 35769 . - . ID=gene-YPIP275_RS01635;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=YPIP275_RS01635;old_locus_tag=YPIP275_4739 NZ_AAOS02000002.1 Protein Homology CDS 34897 35769 . - 0 ID=cds-WP_002208788.1;Parent=gene-YPIP275_RS01635;Dbxref=GenBank:WP_002208788.1;Name=WP_002208788.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208788.1;locus_tag=YPIP275_RS01635;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_002208788.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 36427 37515 . + . ID=gene-YPIP275_RS01640;Name=YPIP275_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01640;old_locus_tag=YPIP275_4741 NZ_AAOS02000002.1 Protein Homology CDS 36427 37515 . + 0 ID=cds-WP_002208790.1;Parent=gene-YPIP275_RS01640;Dbxref=GenBank:WP_002208790.1;Name=WP_002208790.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208790.1;locus_tag=YPIP275_RS01640;product=YeiH family protein;protein_id=WP_002208790.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 37679 38536 . + . ID=gene-YPIP275_RS01645;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=YPIP275_RS01645;old_locus_tag=YPIP275_4742 NZ_AAOS02000002.1 Protein Homology CDS 37679 38536 . + 0 ID=cds-WP_002208791.1;Parent=gene-YPIP275_RS01645;Dbxref=GenBank:WP_002208791.1;Name=WP_002208791.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208791.1;locus_tag=YPIP275_RS01645;product=deoxyribonuclease IV;protein_id=WP_002208791.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 38623 41094 . - . ID=gene-YPIP275_RS01650;Name=psaC;gbkey=Gene;gene=psaC;gene_biotype=protein_coding;locus_tag=YPIP275_RS01650;old_locus_tag=YPIP275_4743 NZ_AAOS02000002.1 Protein Homology CDS 38623 41094 . - 0 ID=cds-WP_002208792.1;Parent=gene-YPIP275_RS01650;Dbxref=GenBank:WP_002208792.1;Name=WP_002208792.1;gbkey=CDS;gene=psaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304319.1;locus_tag=YPIP275_RS01650;product=fimbrial usher PsaC;protein_id=WP_002208792.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 41178 41999 . - . ID=gene-YPIP275_RS01655;Name=psaB;gbkey=Gene;gene=psaB;gene_biotype=protein_coding;locus_tag=YPIP275_RS01655;old_locus_tag=YPIP275_4744 NZ_AAOS02000002.1 Protein Homology CDS 41178 41999 . - 0 ID=cds-WP_002208793.1;Parent=gene-YPIP275_RS01655;Dbxref=GenBank:WP_002208793.1;Name=WP_002208793.1;gbkey=CDS;gene=psaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208793.1;locus_tag=YPIP275_RS01655;product=chaperone protein PsaB;protein_id=WP_002208793.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 42126 42602 . - . ID=gene-YPIP275_RS01660;Name=psaA;gbkey=Gene;gene=psaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01660;old_locus_tag=YPIP275_4745 NZ_AAOS02000002.1 Protein Homology CDS 42126 42602 . - 0 ID=cds-WP_002208794.1;Parent=gene-YPIP275_RS01660;Dbxref=GenBank:WP_002208794.1;Name=WP_002208794.1;gbkey=CDS;gene=psaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208794.1;locus_tag=YPIP275_RS01660;product=fimbrial polyadhesin PsaA;protein_id=WP_002208794.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 43135 43623 . - . ID=gene-YPIP275_RS01665;Name=YPIP275_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01665;old_locus_tag=YPIP275_4746 NZ_AAOS02000002.1 Protein Homology CDS 43135 43623 . - 0 ID=cds-WP_002216523.1;Parent=gene-YPIP275_RS01665;Dbxref=GenBank:WP_002216523.1;Name=WP_002216523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105409.1;locus_tag=YPIP275_RS01665;product=PsaF/MyfF family fimbrial adhesin regulatory protein;protein_id=WP_002216523.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 43620 44264 . - . ID=gene-YPIP275_RS01670;Name=YPIP275_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01670;old_locus_tag=YPIP275_4747 NZ_AAOS02000002.1 Protein Homology CDS 43620 44264 . - 0 ID=cds-WP_002208796.1;Parent=gene-YPIP275_RS01670;Dbxref=GenBank:WP_002208796.1;Name=WP_002208796.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208796.1;locus_tag=YPIP275_RS01670;product=winged helix-turn-helix domain-containing protein;protein_id=WP_002208796.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 44589 46289 . - . ID=gene-YPIP275_RS01675;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01675;old_locus_tag=YPIP275_4748 NZ_AAOS02000002.1 Protein Homology CDS 44589 46289 . - 0 ID=cds-WP_002208797.1;Parent=gene-YPIP275_RS01675;Dbxref=GenBank:WP_002208797.1;Name=WP_002208797.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208797.1;locus_tag=YPIP275_RS01675;product=PTS fructose transporter subunit IIBC;protein_id=WP_002208797.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 46304 47242 . - . ID=gene-YPIP275_RS01680;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=YPIP275_RS01680;old_locus_tag=YPIP275_4749 NZ_AAOS02000002.1 Protein Homology CDS 46304 47242 . - 0 ID=cds-WP_002208798.1;Parent=gene-YPIP275_RS01680;Dbxref=GenBank:WP_002208798.1;Name=WP_002208798.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311087.1;locus_tag=YPIP275_RS01680;product=1-phosphofructokinase;protein_id=WP_002208798.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 47239 48372 . - . ID=gene-YPIP275_RS01685;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=YPIP275_RS01685;old_locus_tag=YPIP275_4750 NZ_AAOS02000002.1 Protein Homology CDS 47239 48372 . - 0 ID=cds-WP_002208799.1;Parent=gene-YPIP275_RS01685;Dbxref=GenBank:WP_002208799.1;Name=WP_002208799.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079941.1;locus_tag=YPIP275_RS01685;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_002208799.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 48634 49089 . + . ID=gene-YPIP275_RS01690;Name=YPIP275_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01690;old_locus_tag=YPIP275_4752 NZ_AAOS02000002.1 Protein Homology CDS 48634 49089 . + 0 ID=cds-WP_002208801.1;Parent=gene-YPIP275_RS01690;Dbxref=GenBank:WP_002208801.1;Name=WP_002208801.1;Ontology_term=GO:0006203,GO:0009132,GO:0042262,GO:0017110,GO:0046872,GO:0047429;gbkey=CDS;go_function=nucleoside diphosphate phosphatase activity|0017110||IEA,metal ion binding|0046872||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=dGTP catabolic process|0006203||IEA,nucleoside diphosphate metabolic process|0009132||IEA,DNA protection|0042262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105412.1;locus_tag=YPIP275_RS01690;product=nucleotide triphosphate diphosphatase NUDT15;protein_id=WP_002208801.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 49202 50200 . - . ID=gene-YPIP275_RS01695;Name=YPIP275_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01695;old_locus_tag=YPIP275_4753 NZ_AAOS02000002.1 Protein Homology CDS 49202 50200 . - 0 ID=cds-WP_002208802.1;Parent=gene-YPIP275_RS01695;Dbxref=GenBank:WP_002208802.1;Name=WP_002208802.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208802.1;locus_tag=YPIP275_RS01695;product=ABC transporter permease;protein_id=WP_002208802.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 50236 51810 . - . ID=gene-YPIP275_RS01700;Name=YPIP275_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01700;old_locus_tag=YPIP275_4754 NZ_AAOS02000002.1 Protein Homology CDS 50236 51810 . - 0 ID=cds-WP_002208803.1;Parent=gene-YPIP275_RS01700;Dbxref=GenBank:WP_002208803.1;Name=WP_002208803.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192027.1;locus_tag=YPIP275_RS01700;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002208803.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 51919 53007 . - . ID=gene-YPIP275_RS01705;Name=YPIP275_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01705;old_locus_tag=YPIP275_4755 NZ_AAOS02000002.1 Protein Homology CDS 51919 53007 . - 0 ID=cds-WP_002208804.1;Parent=gene-YPIP275_RS01705;Dbxref=GenBank:WP_002208804.1;Name=WP_002208804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016598704.1;locus_tag=YPIP275_RS01705;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002208804.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 53155 53865 . - . ID=gene-YPIP275_RS01710;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01710;old_locus_tag=YPIP275_4756 NZ_AAOS02000002.1 Protein Homology CDS 53155 53865 . - 0 ID=cds-WP_002208805.1;Parent=gene-YPIP275_RS01710;Dbxref=GenBank:WP_002208805.1;Name=WP_002208805.1;Ontology_term=GO:0006098,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208805.1;locus_tag=YPIP275_RS01710;product=ribose 5-phosphate isomerase A;protein_id=WP_002208805.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 53885 55438 . - . ID=gene-YPIP275_RS01715;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=YPIP275_RS01715;old_locus_tag=YPIP275_4757 NZ_AAOS02000002.1 Protein Homology CDS 53885 55438 . - 0 ID=cds-WP_002208806.1;Parent=gene-YPIP275_RS01715;Dbxref=GenBank:WP_002208806.1;Name=WP_002208806.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105416.1;locus_tag=YPIP275_RS01715;product=xylulokinase;protein_id=WP_002208806.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 55442 56938 . - . ID=gene-YPIP275_RS01720;Name=YPIP275_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01720;old_locus_tag=YPIP275_4758 NZ_AAOS02000002.1 Protein Homology CDS 55442 56938 . - 0 ID=cds-WP_002208807.1;Parent=gene-YPIP275_RS01720;Dbxref=GenBank:WP_002208807.1;Name=WP_002208807.1;Ontology_term=GO:0004030;gbkey=CDS;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304325.1;locus_tag=YPIP275_RS01720;product=aldehyde dehydrogenase family protein;protein_id=WP_002208807.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 57290 58432 . + . ID=gene-YPIP275_RS01725;Name=YPIP275_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01725;old_locus_tag=YPIP275_4759 NZ_AAOS02000002.1 Protein Homology CDS 57290 58432 . + 0 ID=cds-WP_002208808.1;Parent=gene-YPIP275_RS01725;Dbxref=GenBank:WP_002208808.1;Name=WP_002208808.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208808.1;locus_tag=YPIP275_RS01725;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_002208808.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 58429 59394 . + . ID=gene-YPIP275_RS01730;Name=YPIP275_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01730;old_locus_tag=YPIP275_4760 NZ_AAOS02000002.1 Protein Homology CDS 58429 59394 . + 0 ID=cds-WP_002208809.1;Parent=gene-YPIP275_RS01730;Dbxref=GenBank:WP_002208809.1;Name=WP_002208809.1;Ontology_term=GO:0006351,GO:0003682,GO:0003714,GO:0016616,GO:0070403,GO:0140297;gbkey=CDS;go_function=chromatin binding|0003682||IEA,transcription corepressor activity|0003714||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD+ binding|0070403||IEA,DNA-binding transcription factor binding|0140297||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230767.1;locus_tag=YPIP275_RS01730;product=C-terminal binding protein;protein_id=WP_002208809.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 59405 60220 . + . ID=gene-YPIP275_RS01735;Name=YPIP275_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01735;old_locus_tag=YPIP275_4761 NZ_AAOS02000002.1 Protein Homology CDS 59405 60220 . + 0 ID=cds-WP_002208810.1;Parent=gene-YPIP275_RS01735;Dbxref=GenBank:WP_002208810.1;Name=WP_002208810.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413594.1;locus_tag=YPIP275_RS01735;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_002208810.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 60289 60543 . - . ID=gene-YPIP275_RS01740;Name=YPIP275_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01740;old_locus_tag=YPIP275_4762 NZ_AAOS02000002.1 Protein Homology CDS 60289 60543 . - 0 ID=cds-WP_002208811.1;Parent=gene-YPIP275_RS01740;Dbxref=GenBank:WP_002208811.1;Name=WP_002208811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208811.1;locus_tag=YPIP275_RS01740;product=YkgJ family cysteine cluster protein;protein_id=WP_002208811.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 60918 62162 . + . ID=gene-YPIP275_RS01745;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=YPIP275_RS01745;old_locus_tag=YPIP275_4763 NZ_AAOS02000002.1 Protein Homology CDS 60918 62162 . + 0 ID=cds-WP_002208812.1;Parent=gene-YPIP275_RS01745;Dbxref=GenBank:WP_002208812.1;Name=WP_002208812.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413593.1;locus_tag=YPIP275_RS01745;product=tryptophan permease;protein_id=WP_002208812.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 62266 62838 . + . ID=gene-YPIP275_RS01750;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=YPIP275_RS01750;old_locus_tag=YPIP275_4764 NZ_AAOS02000002.1 Protein Homology CDS 62266 62838 . + 0 ID=cds-WP_002228019.1;Parent=gene-YPIP275_RS01750;Dbxref=GenBank:WP_002228019.1;Name=WP_002228019.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228019.1;locus_tag=YPIP275_RS01750;product=elongation factor P-like protein YeiP;protein_id=WP_002228019.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 62978 64171 . - . ID=gene-YPIP275_RS01755;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01755;old_locus_tag=YPIP275_4765 NZ_AAOS02000002.1 Protein Homology CDS 62978 64171 . - 0 ID=cds-WP_002208813.1;Parent=gene-YPIP275_RS01755;Dbxref=GenBank:WP_002208813.1;Name=WP_002208813.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208813.1;locus_tag=YPIP275_RS01755;product=mannonate dehydratase;protein_id=WP_002208813.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 64756 66228 . + . ID=gene-YPIP275_RS01760;Name=YPIP275_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01760;old_locus_tag=YPIP275_4767 NZ_AAOS02000002.1 Protein Homology CDS 64756 66228 . + 0 ID=cds-WP_002208815.1;Parent=gene-YPIP275_RS01760;Dbxref=GenBank:WP_002208815.1;Name=WP_002208815.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413592.1;locus_tag=YPIP275_RS01760;product=mannitol dehydrogenase family protein;protein_id=WP_002208815.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 66372 67115 . - . ID=gene-YPIP275_RS01765;Name=YPIP275_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01765;old_locus_tag=YPIP275_4768 NZ_AAOS02000002.1 Protein Homology CDS 66372 67115 . - 0 ID=cds-WP_002208816.1;Parent=gene-YPIP275_RS01765;Dbxref=GenBank:WP_002208816.1;Name=WP_002208816.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208816.1;locus_tag=YPIP275_RS01765;product=GntR family transcriptional regulator;protein_id=WP_002208816.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 67281 67505 . - . ID=gene-YPIP275_RS29340;Name=YPIP275_RS29340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29340 NZ_AAOS02000002.1 Protein Homology CDS 67281 67505 . - 0 ID=cds-WP_487251835.1;Parent=gene-YPIP275_RS29340;Dbxref=GenBank:WP_487251835.1;Name=WP_487251835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF054412.1;locus_tag=YPIP275_RS29340;product=YmdA family protein;protein_id=WP_487251835.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 67923 68906 . + . ID=gene-YPIP275_RS01775;Name=YPIP275_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01775;old_locus_tag=YPIP275_4771 NZ_AAOS02000002.1 Protein Homology CDS 67923 68906 . + 0 ID=cds-WP_002208819.1;Parent=gene-YPIP275_RS01775;Dbxref=GenBank:WP_002208819.1;Name=WP_002208819.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413591.1;locus_tag=YPIP275_RS01775;product=CobW family GTP-binding protein;protein_id=WP_002208819.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 68965 69666 . + . ID=gene-YPIP275_RS01780;Name=YPIP275_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01780;old_locus_tag=YPIP275_4772 NZ_AAOS02000002.1 Protein Homology CDS 68965 69666 . + 0 ID=cds-WP_002208820.1;Parent=gene-YPIP275_RS01780;Dbxref=GenBank:WP_002208820.1;Name=WP_002208820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192018.1;locus_tag=YPIP275_RS01780;product=phosphatase PAP2 family protein;protein_id=WP_002208820.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 70108 70692 . + . ID=gene-YPIP275_RS01785;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=YPIP275_RS01785;old_locus_tag=YPIP275_4774 NZ_AAOS02000002.1 Protein Homology CDS 70108 70692 . + 0 ID=cds-WP_002208822.1;Parent=gene-YPIP275_RS01785;Dbxref=GenBank:WP_002208822.1;Name=WP_002208822.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004096016.1;locus_tag=YPIP275_RS01785;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_002208822.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 71388 72860 . + . ID=gene-YPIP275_RS01790;Name=YPIP275_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01790;old_locus_tag=YPIP275_4778 NZ_AAOS02000002.1 Protein Homology CDS 71388 72860 . + 0 ID=cds-WP_002229119.1;Parent=gene-YPIP275_RS01790;Dbxref=GenBank:WP_002229119.1;Name=WP_002229119.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF007839.0;locus_tag=YPIP275_RS01790;product=cyclic di-GMP phosphodiesterase;protein_id=WP_002229119.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 72942 74750 . + . ID=gene-YPIP275_RS01795;Name=YPIP275_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01795;old_locus_tag=YPIP275_4779 NZ_AAOS02000002.1 Protein Homology CDS 72942 74750 . + 0 ID=cds-WP_002208825.1;Parent=gene-YPIP275_RS01795;Dbxref=GenBank:WP_002208825.1;Name=WP_002208825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105425.1;locus_tag=YPIP275_RS01795;product=extracellular solute-binding protein;protein_id=WP_002208825.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 74760 75860 . + . ID=gene-YPIP275_RS01800;Name=YPIP275_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01800;old_locus_tag=YPIP275_4780 NZ_AAOS02000002.1 Protein Homology CDS 74760 75860 . + 0 ID=cds-WP_002208826.1;Parent=gene-YPIP275_RS01800;Dbxref=GenBank:WP_002208826.1;Name=WP_002208826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083498.1;locus_tag=YPIP275_RS01800;product=microcin C ABC transporter permease YejB;protein_id=WP_002208826.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 75863 76888 . + . ID=gene-YPIP275_RS01805;Name=YPIP275_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01805;old_locus_tag=YPIP275_4781 NZ_AAOS02000002.1 Protein Homology CDS 75863 76888 . + 0 ID=cds-WP_002353954.1;Parent=gene-YPIP275_RS01805;Dbxref=GenBank:WP_002353954.1;Name=WP_002353954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353954.1;locus_tag=YPIP275_RS01805;product=ABC transporter permease;protein_id=WP_002353954.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 76890 78482 . + . ID=gene-YPIP275_RS01810;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=YPIP275_RS01810;old_locus_tag=YPIP275_4782 NZ_AAOS02000002.1 Protein Homology CDS 76890 78482 . + 0 ID=cds-WP_002208828.1;Parent=gene-YPIP275_RS01810;Dbxref=GenBank:WP_002208828.1;Name=WP_002208828.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105426.1;locus_tag=YPIP275_RS01810;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_002208828.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 78543 78887 . - . ID=gene-YPIP275_RS01815;Name=YPIP275_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01815;old_locus_tag=YPIP275_4783 NZ_AAOS02000002.1 Protein Homology CDS 78543 78887 . - 0 ID=cds-WP_002208829.1;Parent=gene-YPIP275_RS01815;Dbxref=GenBank:WP_002208829.1;Name=WP_002208829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208829.1;locus_tag=YPIP275_RS01815;product=YejG family protein;protein_id=WP_002208829.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 79854 81053 . - . ID=gene-YPIP275_RS01820;Name=YPIP275_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01820;old_locus_tag=YPIP275_4785 NZ_AAOS02000002.1 Protein Homology CDS 79854 81053 . - 0 ID=cds-WP_002208831.1;Parent=gene-YPIP275_RS01820;Dbxref=GenBank:WP_002208831.1;Name=WP_002208831.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208831.1;locus_tag=YPIP275_RS01820;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_002208831.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 81172 81879 . - . ID=gene-YPIP275_RS01825;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01825;old_locus_tag=YPIP275_4786 NZ_AAOS02000002.1 Protein Homology CDS 81172 81879 . - 0 ID=cds-WP_002208832.1;Parent=gene-YPIP275_RS01825;Dbxref=GenBank:WP_002208832.1;Name=WP_002208832.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192013.1;locus_tag=YPIP275_RS01825;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_002208832.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 82393 84150 . + . ID=gene-YPIP275_RS01830;Name=radD;gbkey=Gene;gene=radD;gene_biotype=protein_coding;gene_synonym=yejH;locus_tag=YPIP275_RS01830;old_locus_tag=YPIP275_4787 NZ_AAOS02000002.1 Protein Homology CDS 82393 84150 . + 0 ID=cds-WP_002208833.1;Parent=gene-YPIP275_RS01830;Dbxref=GenBank:WP_002208833.1;Name=WP_002208833.1;Ontology_term=GO:0006281;gbkey=CDS;gene=radD;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208833.1;locus_tag=YPIP275_RS01830;product=DNA repair helicase RadD;protein_id=WP_002208833.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 84312 84596 . + . ID=gene-YPIP275_RS01835;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=YPIP275_RS01835;old_locus_tag=YPIP275_4788 NZ_AAOS02000002.1 Protein Homology CDS 84312 84596 . + 0 ID=cds-WP_002208834.1;Parent=gene-YPIP275_RS01835;Dbxref=GenBank:WP_002208834.1;Name=WP_002208834.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208834.1;locus_tag=YPIP275_RS01835;product=50S ribosomal protein L25;protein_id=WP_002208834.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 84735 85193 . - . ID=gene-YPIP275_RS01840;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01840;old_locus_tag=YPIP275_4789 NZ_AAOS02000002.1 Protein Homology CDS 84735 85193 . - 0 ID=cds-WP_002213775.1-38;Parent=gene-YPIP275_RS01840;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS01840;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 85394 86398 . - . ID=gene-YPIP275_RS01845;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=YPIP275_RS01845;old_locus_tag=YPIP275_4790 NZ_AAOS02000002.1 Protein Homology CDS 85394 86398 . - 0 ID=cds-WP_002208835.1;Parent=gene-YPIP275_RS01845;Dbxref=GenBank:WP_002208835.1;Name=WP_002208835.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304331.1;locus_tag=YPIP275_RS01845;product=nucleoid-associated protein YejK;protein_id=WP_002208835.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 86576 86803 . + . ID=gene-YPIP275_RS01850;Name=YPIP275_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01850;old_locus_tag=YPIP275_4791 NZ_AAOS02000002.1 Protein Homology CDS 86576 86803 . + 0 ID=cds-WP_002208836.1;Parent=gene-YPIP275_RS01850;Dbxref=GenBank:WP_002208836.1;Name=WP_002208836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700534.1;locus_tag=YPIP275_RS01850;product=YejL family protein;protein_id=WP_002208836.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 86831 88627 . + . ID=gene-YPIP275_RS01855;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=YPIP275_RS01855;old_locus_tag=YPIP275_4792 NZ_AAOS02000002.1 Protein Homology CDS 86831 88627 . + 0 ID=cds-WP_002208837.1;Parent=gene-YPIP275_RS01855;Dbxref=GenBank:WP_002208837.1;Name=WP_002208837.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230706.1;locus_tag=YPIP275_RS01855;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_002208837.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 88732 88808 . + . ID=gene-YPIP275_RS01860;Name=YPIP275_RS01860;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS01860;old_locus_tag=YPIP275_4794 NZ_AAOS02000002.1 tRNAscan-SE tRNA 88732 88808 . + . ID=rna-YPIP275_RS01860;Parent=gene-YPIP275_RS01860;anticodon=(pos:88766..88768);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS01860;product=tRNA-Pro NZ_AAOS02000002.1 tRNAscan-SE exon 88732 88808 . + . ID=exon-YPIP275_RS01860-1;Parent=rna-YPIP275_RS01860;anticodon=(pos:88766..88768);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS01860;product=tRNA-Pro NZ_AAOS02000002.1 RefSeq gene 88858 89241 . + . ID=gene-YPIP275_RS26675;Name=YPIP275_RS26675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26675;old_locus_tag=YPIP275_4795 NZ_AAOS02000002.1 GeneMarkS-2+ CDS 88858 89241 . + 0 ID=cds-WP_002230704.1;Parent=gene-YPIP275_RS26675;Dbxref=GenBank:WP_002230704.1;Name=WP_002230704.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=YPIP275_RS26675;product=DUF927 domain-containing protein;protein_id=WP_002230704.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 89598 90746 . + . ID=gene-YPIP275_RS01870;Name=YPIP275_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01870;old_locus_tag=YPIP275_4796 NZ_AAOS02000002.1 Protein Homology CDS 89598 90746 . + 0 ID=cds-WP_002208839.1;Parent=gene-YPIP275_RS01870;Dbxref=GenBank:WP_002208839.1;Name=WP_002208839.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208839.1;locus_tag=YPIP275_RS01870;product=HNH endonuclease signature motif containing protein;protein_id=WP_002208839.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 90759 91247 . + . ID=gene-YPIP275_RS01875;Name=YPIP275_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01875;old_locus_tag=YPIP275_4797 NZ_AAOS02000002.1 Protein Homology CDS 90759 91247 . + 0 ID=cds-WP_002208840.1;Parent=gene-YPIP275_RS01875;Dbxref=GenBank:WP_002208840.1;Name=WP_002208840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674080.1;locus_tag=YPIP275_RS01875;product=YrhA family protein;protein_id=WP_002208840.1;transl_table=11 NZ_AAOS02000002.1 RefSeq pseudogene 91518 91607 . + . ID=gene-YPIP275_RS28390;Name=YPIP275_RS28390;end_range=91607,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28390;partial=true;pseudo=true NZ_AAOS02000002.1 Protein Homology CDS 91518 91607 . + 0 ID=cds-YPIP275_RS28390;Parent=gene-YPIP275_RS28390;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=91607,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217366.1;locus_tag=YPIP275_RS28390;partial=true;product=terminase small subunit;pseudo=true;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 91947 92309 . + . ID=gene-YPIP275_RS01885;Name=YPIP275_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01885;old_locus_tag=YPIP275_4798 NZ_AAOS02000002.1 Protein Homology CDS 91947 92309 . + 0 ID=cds-WP_002208841.1;Parent=gene-YPIP275_RS01885;Dbxref=GenBank:WP_002208841.1;Name=WP_002208841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105431.1;locus_tag=YPIP275_RS01885;product=hypothetical protein;protein_id=WP_002208841.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 92435 93871 . - . ID=gene-YPIP275_RS01890;Name=YPIP275_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01890;old_locus_tag=YPIP275_4799 NZ_AAOS02000002.1 Protein Homology CDS 92435 93871 . - 0 ID=cds-WP_002208842.1;Parent=gene-YPIP275_RS01890;Dbxref=GenBank:WP_002208842.1;Name=WP_002208842.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229399.1;locus_tag=YPIP275_RS01890;product=6-phospho-beta-glucosidase;protein_id=WP_002208842.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 94162 94902 . - . ID=gene-YPIP275_RS01895;Name=YPIP275_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01895;old_locus_tag=YPIP275_4800 NZ_AAOS02000002.1 Protein Homology CDS 94162 94902 . - 0 ID=cds-WP_002208843.1;Parent=gene-YPIP275_RS01895;Dbxref=GenBank:WP_002208843.1;Name=WP_002208843.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208843.1;locus_tag=YPIP275_RS01895;product=MurR/RpiR family transcriptional regulator;protein_id=WP_002208843.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 95200 95979 . - . ID=gene-YPIP275_RS01900;Name=YPIP275_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01900;old_locus_tag=YPIP275_4801 NZ_AAOS02000002.1 Protein Homology CDS 95200 95979 . - 0 ID=cds-WP_002208845.1;Parent=gene-YPIP275_RS01900;Dbxref=GenBank:WP_002208845.1;Name=WP_002208845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016599175.1;locus_tag=YPIP275_RS01900;product=phage tail protein;protein_id=WP_002208845.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 96076 96423 . - . ID=gene-YPIP275_RS01905;Name=YPIP275_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01905;old_locus_tag=YPIP275_4802 NZ_AAOS02000002.1 Protein Homology CDS 96076 96423 . - 0 ID=cds-WP_002208846.1;Parent=gene-YPIP275_RS01905;Dbxref=GenBank:WP_002208846.1;Name=WP_002208846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208846.1;locus_tag=YPIP275_RS01905;product=putative phage tail protein;protein_id=WP_002208846.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 96420 96680 . - . ID=gene-YPIP275_RS01910;Name=YPIP275_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01910;old_locus_tag=YPIP275_4803 NZ_AAOS02000002.1 Protein Homology CDS 96420 96680 . - 0 ID=cds-WP_002215458.1;Parent=gene-YPIP275_RS01910;Dbxref=GenBank:WP_002215458.1;Name=WP_002215458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215458.1;locus_tag=YPIP275_RS01910;product=putative phage tail protein;protein_id=WP_002215458.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 96677 97813 . - . ID=gene-YPIP275_RS01915;Name=YPIP275_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01915;old_locus_tag=YPIP275_4804 NZ_AAOS02000002.1 Protein Homology CDS 96677 97813 . - 0 ID=cds-WP_002208847.1;Parent=gene-YPIP275_RS01915;Dbxref=GenBank:WP_002208847.1;Name=WP_002208847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083508.1;locus_tag=YPIP275_RS01915;product=baseplate J/gp47 family protein;protein_id=WP_002208847.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 97817 98272 . - . ID=gene-YPIP275_RS01920;Name=YPIP275_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01920;old_locus_tag=YPIP275_4805 NZ_AAOS02000002.1 Protein Homology CDS 97817 98272 . - 0 ID=cds-WP_002208848.1;Parent=gene-YPIP275_RS01920;Dbxref=GenBank:WP_002208848.1;Name=WP_002208848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105435.1;locus_tag=YPIP275_RS01920;product=phage GP46 family protein;protein_id=WP_002208848.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 98269 98865 . - . ID=gene-YPIP275_RS01925;Name=YPIP275_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01925;old_locus_tag=YPIP275_4806 NZ_AAOS02000002.1 Protein Homology CDS 98269 98865 . - 0 ID=cds-WP_002215460.1;Parent=gene-YPIP275_RS01925;Dbxref=GenBank:WP_002215460.1;Name=WP_002215460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215460.1;locus_tag=YPIP275_RS01925;product=phage baseplate assembly protein domain-containing protein;protein_id=WP_002215460.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 98881 99936 . - . ID=gene-YPIP275_RS01930;Name=YPIP275_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01930;old_locus_tag=YPIP275_4807 NZ_AAOS02000002.1 Protein Homology CDS 98881 99936 . - 0 ID=cds-WP_002208850.1;Parent=gene-YPIP275_RS01930;Dbxref=GenBank:WP_002208850.1;Name=WP_002208850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413587.1;locus_tag=YPIP275_RS01930;product=phage baseplate assembly protein;protein_id=WP_002208850.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 99933 101339 . - . ID=gene-YPIP275_RS01935;Name=YPIP275_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01935;old_locus_tag=YPIP275_4808 NZ_AAOS02000002.1 Protein Homology CDS 99933 101339 . - 0 ID=cds-WP_002208852.1;Parent=gene-YPIP275_RS01935;Dbxref=GenBank:WP_002208852.1;Name=WP_002208852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208852.1;locus_tag=YPIP275_RS01935;product=DNA circularization protein;protein_id=WP_002208852.1;transl_table=11 NZ_AAOS02000002.1 RefSeq pseudogene 101380 101466 . - . ID=gene-YPIP275_RS29165;Name=YPIP275_RS29165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS29165;partial=true;pseudo=true;start_range=.,101380 NZ_AAOS02000002.1 Protein Homology CDS 101380 101466 . - 0 ID=cds-YPIP275_RS29165;Parent=gene-YPIP275_RS29165;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224869.1;locus_tag=YPIP275_RS29165;partial=true;product=gluconate 5-dehydrogenase;pseudo=true;start_range=.,101380;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 101606 103099 . - . ID=gene-YPIP275_RS01940;Name=YPIP275_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01940;old_locus_tag=YPIP275_4809 NZ_AAOS02000002.1 Protein Homology CDS 101606 103099 . - 0 ID=cds-WP_002208853.1;Parent=gene-YPIP275_RS01940;Dbxref=GenBank:WP_002208853.1;Name=WP_002208853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208853.1;locus_tag=YPIP275_RS01940;product=coat protein;protein_id=WP_002208853.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 103220 103519 . - . ID=gene-YPIP275_RS01945;Name=YPIP275_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01945;old_locus_tag=YPIP275_4810 NZ_AAOS02000002.1 Protein Homology CDS 103220 103519 . - 0 ID=cds-WP_002208854.1;Parent=gene-YPIP275_RS01945;Dbxref=GenBank:WP_002208854.1;Name=WP_002208854.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105439.1;locus_tag=YPIP275_RS01945;product=phage tail assembly protein;protein_id=WP_002208854.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 103521 103889 . - . ID=gene-YPIP275_RS01950;Name=YPIP275_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01950;old_locus_tag=YPIP275_4811 NZ_AAOS02000002.1 Protein Homology CDS 103521 103889 . - 0 ID=cds-WP_002208855.1;Parent=gene-YPIP275_RS01950;Dbxref=GenBank:WP_002208855.1;Name=WP_002208855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208855.1;locus_tag=YPIP275_RS01950;product=phage tail tube protein;protein_id=WP_002208855.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 103911 105419 . - . ID=gene-YPIP275_RS01955;Name=YPIP275_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01955;old_locus_tag=YPIP275_4812 NZ_AAOS02000002.1 Protein Homology CDS 103911 105419 . - 0 ID=cds-WP_002208856.1;Parent=gene-YPIP275_RS01955;Dbxref=GenBank:WP_002208856.1;Name=WP_002208856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004708661.1;locus_tag=YPIP275_RS01955;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_002208856.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 105416 105610 . - . ID=gene-YPIP275_RS01960;Name=YPIP275_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01960;old_locus_tag=YPIP275_4813 NZ_AAOS02000002.1 Protein Homology CDS 105416 105610 . - 0 ID=cds-WP_002208857.1;Parent=gene-YPIP275_RS01960;Dbxref=GenBank:WP_002208857.1;Name=WP_002208857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105441.1;locus_tag=YPIP275_RS01960;product=DUF2635 domain-containing protein;protein_id=WP_002208857.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 105615 106232 . - . ID=gene-YPIP275_RS01965;Name=YPIP275_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01965;old_locus_tag=YPIP275_4814 NZ_AAOS02000002.1 Protein Homology CDS 105615 106232 . - 0 ID=cds-WP_002208858.1;Parent=gene-YPIP275_RS01965;Dbxref=GenBank:WP_002208858.1;Name=WP_002208858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683893.1;locus_tag=YPIP275_RS01965;product=ATP-binding protein;protein_id=WP_002208858.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 106278 106568 . - . ID=gene-YPIP275_RS01970;Name=YPIP275_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01970;old_locus_tag=YPIP275_4815 NZ_AAOS02000002.1 Protein Homology CDS 106278 106568 . - 0 ID=cds-WP_002208859.1;Parent=gene-YPIP275_RS01970;Dbxref=GenBank:WP_002208859.1;Name=WP_002208859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208859.1;locus_tag=YPIP275_RS01970;product=hypothetical protein;protein_id=WP_002208859.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 107199 107993 . - . ID=gene-YPIP275_RS01975;Name=otnI;gbkey=Gene;gene=otnI;gene_biotype=protein_coding;locus_tag=YPIP275_RS01975;old_locus_tag=YPIP275_4816 NZ_AAOS02000002.1 Protein Homology CDS 107199 107993 . - 0 ID=cds-WP_002208860.1;Parent=gene-YPIP275_RS01975;Dbxref=GenBank:WP_002208860.1;Name=WP_002208860.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;gene=otnI;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304338.1;locus_tag=YPIP275_RS01975;product=2-oxo-tetronate isomerase;protein_id=WP_002208860.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 107969 108781 . - . ID=gene-YPIP275_RS01980;Name=YPIP275_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01980;old_locus_tag=YPIP275_4817 NZ_AAOS02000002.1 Protein Homology CDS 107969 108781 . - 0 ID=cds-WP_002208861.1;Parent=gene-YPIP275_RS01980;Dbxref=GenBank:WP_002208861.1;Name=WP_002208861.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208861.1;locus_tag=YPIP275_RS01980;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_002208861.1;transl_table=11 NZ_AAOS02000002.1 RefSeq pseudogene 108784 109433 . - . ID=gene-YPIP275_RS01985;Name=otnC;gbkey=Gene;gene=otnC;gene_biotype=pseudogene;locus_tag=YPIP275_RS01985;old_locus_tag=YPIP275_4818;pseudo=true NZ_AAOS02000002.1 Protein Homology CDS 108784 109433 . - 0 ID=cds-YPIP275_RS01985;Parent=gene-YPIP275_RS01985;Note=frameshifted;Ontology_term=GO:0005996,GO:0016829;gbkey=CDS;gene=otnC;go_function=lyase activity|0016829||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706328.1;locus_tag=YPIP275_RS01985;product=3-oxo-tetronate 4-phosphate decarboxylase;pseudo=true;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 109490 110794 . - . ID=gene-YPIP275_RS01990;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=YPIP275_RS01990;old_locus_tag=YPIP275_4819 NZ_AAOS02000002.1 Protein Homology CDS 109490 110794 . - 0 ID=cds-WP_002208862.1;Parent=gene-YPIP275_RS01990;Dbxref=GenBank:WP_002208862.1;Name=WP_002208862.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208862.1;locus_tag=YPIP275_RS01990;product=3-oxo-tetronate kinase;protein_id=WP_002208862.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 111005 111430 . - . ID=gene-YPIP275_RS01995;Name=YPIP275_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01995;old_locus_tag=YPIP275_4820 NZ_AAOS02000002.1 Protein Homology CDS 111005 111430 . - 0 ID=cds-WP_002208863.1;Parent=gene-YPIP275_RS01995;Dbxref=GenBank:WP_002208863.1;Name=WP_002208863.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208863.1;locus_tag=YPIP275_RS01995;product=antiterminator Q family protein;protein_id=WP_002208863.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 111758 112480 . + . ID=gene-YPIP275_RS02000;Name=YPIP275_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02000;old_locus_tag=YPIP275_4821 NZ_AAOS02000002.1 Protein Homology CDS 111758 112480 . + 0 ID=cds-WP_002208864.1;Parent=gene-YPIP275_RS02000;Dbxref=GenBank:WP_002208864.1;Name=WP_002208864.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208864.1;locus_tag=YPIP275_RS02000;product=LexA family protein;protein_id=WP_002208864.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 112686 112928 . + . ID=gene-YPIP275_RS02005;Name=YPIP275_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02005;old_locus_tag=YPIP275_4823 NZ_AAOS02000002.1 Protein Homology CDS 112686 112928 . + 0 ID=cds-WP_002208866.1;Parent=gene-YPIP275_RS02005;Dbxref=GenBank:WP_002208866.1;Name=WP_002208866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208866.1;locus_tag=YPIP275_RS02005;product=DinI family protein;protein_id=WP_002208866.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 113100 114035 . + . ID=gene-YPIP275_RS02010;Name=ycoA;gbkey=Gene;gene=ycoA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02010;old_locus_tag=YPIP275_4824 NZ_AAOS02000002.1 Protein Homology CDS 113100 114035 . + 0 ID=cds-WP_002208867.1;Parent=gene-YPIP275_RS02010;Dbxref=GenBank:WP_002208867.1;Name=WP_002208867.1;gbkey=CDS;gene=ycoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208867.1;locus_tag=YPIP275_RS02010;product=omptin family outer membrane beta-barrel protein YcoA;protein_id=WP_002208867.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 114457 116244 . + . ID=gene-YPIP275_RS02015;Name=YPIP275_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02015;old_locus_tag=YPIP275_4825 NZ_AAOS02000002.1 Protein Homology CDS 114457 116244 . + 0 ID=cds-WP_002208868.1;Parent=gene-YPIP275_RS02015;Dbxref=GenBank:WP_002208868.1;Name=WP_002208868.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105444.1;locus_tag=YPIP275_RS02015;product=methyl-accepting chemotaxis protein;protein_id=WP_002208868.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 116318 117346 . - . ID=gene-YPIP275_RS02020;Name=YPIP275_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02020;old_locus_tag=YPIP275_4826 NZ_AAOS02000002.1 Protein Homology CDS 116318 117346 . - 0 ID=cds-WP_002208869.1;Parent=gene-YPIP275_RS02020;Dbxref=GenBank:WP_002208869.1;Name=WP_002208869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230695.1;locus_tag=YPIP275_RS02020;product=MBL fold metallo-hydrolase;protein_id=WP_002208869.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 117723 119249 . + . ID=gene-YPIP275_RS02025;Name=YPIP275_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02025;old_locus_tag=YPIP275_4828 NZ_AAOS02000002.1 Protein Homology CDS 117723 119249 . + 0 ID=cds-WP_002208870.1;Parent=gene-YPIP275_RS02025;Dbxref=GenBank:WP_002208870.1;Name=WP_002208870.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208870.1;locus_tag=YPIP275_RS02025;product=MFS transporter;protein_id=WP_002208870.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 119524 120690 . + . ID=gene-YPIP275_RS02035;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=YPIP275_RS02035;old_locus_tag=YPIP275_4830 NZ_AAOS02000002.1 Protein Homology CDS 119524 120690 . + 0 ID=cds-WP_002228026.1;Parent=gene-YPIP275_RS02035;Dbxref=GenBank:WP_002228026.1;Name=WP_002228026.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228026.1;locus_tag=YPIP275_RS02035;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_002228026.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 120878 120953 . - . ID=gene-YPIP275_RS02040;Name=YPIP275_RS02040;gbkey=Gene;gene_biotype=tRNA;locus_tag=YPIP275_RS02040;old_locus_tag=YPIP275_4831 NZ_AAOS02000002.1 tRNAscan-SE tRNA 120878 120953 . - . ID=rna-YPIP275_RS02040;Parent=gene-YPIP275_RS02040;anticodon=(pos:complement(120918..120920));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS02040;product=tRNA-Thr NZ_AAOS02000002.1 tRNAscan-SE exon 120878 120953 . - . ID=exon-YPIP275_RS02040-1;Parent=rna-YPIP275_RS02040;anticodon=(pos:complement(120918..120920));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=YPIP275_RS02040;product=tRNA-Thr NZ_AAOS02000002.1 RefSeq gene 121417 122199 . - . ID=gene-YPIP275_RS02045;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS02045;old_locus_tag=YPIP275_4832 NZ_AAOS02000002.1 Protein Homology CDS 121417 122199 . - 0 ID=cds-WP_001317493.1-47;Parent=gene-YPIP275_RS02045;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS02045;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 122196 123218 . - . ID=gene-YPIP275_RS02050;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02050;old_locus_tag=YPIP275_4833 NZ_AAOS02000002.1 Protein Homology CDS 122196 123218 . - 0 ID=cds-WP_000255944.1-41;Parent=gene-YPIP275_RS02050;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS02050;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000002.1 RefSeq pseudogene 123303 124487 . - . ID=gene-YPIP275_RS02055;Name=YPIP275_RS02055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS02055;old_locus_tag=YPIP275_4834;partial=true;pseudo=true;start_range=.,123303 NZ_AAOS02000002.1 Protein Homology CDS 123303 124487 . - 0 ID=cds-YPIP275_RS02055;Parent=gene-YPIP275_RS02055;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303426.1;locus_tag=YPIP275_RS02055;partial=true;product=helicase HerA-like domain-containing protein;pseudo=true;start_range=.,123303;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 124813 125382 . - . ID=gene-YPIP275_RS02060;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=YPIP275_RS02060;old_locus_tag=YPIP275_4835 NZ_AAOS02000002.1 Protein Homology CDS 124813 125382 . - 0 ID=cds-WP_002208878.1;Parent=gene-YPIP275_RS02060;Dbxref=GenBank:WP_002208878.1;Name=WP_002208878.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312241.1;locus_tag=YPIP275_RS02060;product=peptidylprolyl isomerase A;protein_id=WP_002208878.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 125898 127211 . + . ID=gene-YPIP275_RS02065;Name=YPIP275_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02065;old_locus_tag=YPIP275_4837 NZ_AAOS02000002.1 Protein Homology CDS 125898 127211 . + 0 ID=cds-WP_002208880.1;Parent=gene-YPIP275_RS02065;Dbxref=GenBank:WP_002208880.1;Name=WP_002208880.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193227.1;locus_tag=YPIP275_RS02065;product=6-phospho-beta-glucosidase;protein_id=WP_002208880.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 127460 128446 . + . ID=gene-YPIP275_RS02070;Name=YPIP275_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02070;old_locus_tag=YPIP275_4838 NZ_AAOS02000002.1 Protein Homology CDS 127460 128446 . + 0 ID=cds-WP_002208881.1;Parent=gene-YPIP275_RS02070;Dbxref=GenBank:WP_002208881.1;Name=WP_002208881.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208881.1;locus_tag=YPIP275_RS02070;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002208881.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 128547 130607 . - . ID=gene-YPIP275_RS02075;Name=YPIP275_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02075;old_locus_tag=YPIP275_4839 NZ_AAOS02000002.1 Protein Homology CDS 128547 130607 . - 0 ID=cds-WP_002208882.1;Parent=gene-YPIP275_RS02075;Dbxref=GenBank:WP_002208882.1;Name=WP_002208882.1;Ontology_term=GO:0006825,GO:0005375,GO:0005507,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=copper ion transmembrane transporter activity|0005375||IEA,copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208882.1;locus_tag=YPIP275_RS02075;product=TonB-dependent copper receptor;protein_id=WP_002208882.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 131093 132277 . + . ID=gene-YPIP275_RS02080;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02080;old_locus_tag=YPIP275_4840 NZ_AAOS02000002.1 Protein Homology CDS 131093 132277 . + 0 ID=cds-WP_002215690.1;Parent=gene-YPIP275_RS02080;Dbxref=GenBank:WP_002215690.1;Name=WP_002215690.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019084080.1;locus_tag=YPIP275_RS02080;product=MFS transporter TsgA;protein_id=WP_002215690.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 132362 133660 . - . ID=gene-YPIP275_RS02085;Name=YPIP275_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02085;old_locus_tag=YPIP275_4841 NZ_AAOS02000002.1 Protein Homology CDS 132362 133660 . - 0 ID=cds-WP_002228747.1;Parent=gene-YPIP275_RS02085;Dbxref=GenBank:WP_002228747.1;Name=WP_002228747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012414075.1;locus_tag=YPIP275_RS02085;product=cytosine deaminase;protein_id=WP_002228747.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 133982 136528 . + . ID=gene-YPIP275_RS02090;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=YPIP275_RS02090;old_locus_tag=YPIP275_4843 NZ_AAOS02000002.1 Protein Homology CDS 133982 136528 . + 0 ID=cds-WP_002208886.1;Parent=gene-YPIP275_RS02090;Dbxref=GenBank:WP_002208886.1;Name=WP_002208886.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208886.1;locus_tag=YPIP275_RS02090;product=nitrite reductase large subunit NirB;protein_id=WP_002208886.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 136525 136851 . + . ID=gene-YPIP275_RS02095;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=YPIP275_RS02095;old_locus_tag=YPIP275_4844 NZ_AAOS02000002.1 Protein Homology CDS 136525 136851 . + 0 ID=cds-WP_002208887.1;Parent=gene-YPIP275_RS02095;Dbxref=GenBank:WP_002208887.1;Name=WP_002208887.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208887.1;locus_tag=YPIP275_RS02095;product=nitrite reductase small subunit NirD;protein_id=WP_002208887.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 137054 137860 . + . ID=gene-YPIP275_RS02100;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=YPIP275_RS02100;old_locus_tag=YPIP275_4846 NZ_AAOS02000002.1 Protein Homology CDS 137054 137860 . + 0 ID=cds-WP_002208888.1;Parent=gene-YPIP275_RS02100;Dbxref=GenBank:WP_002208888.1;Name=WP_002208888.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208888.1;locus_tag=YPIP275_RS02100;product=nitrite transporter NirC;protein_id=WP_002208888.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 137948 139360 . + . ID=gene-YPIP275_RS02105;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=YPIP275_RS02105;old_locus_tag=YPIP275_4847 NZ_AAOS02000002.1 Protein Homology CDS 137948 139360 . + 0 ID=cds-WP_002208890.1;Parent=gene-YPIP275_RS02105;Dbxref=GenBank:WP_002208890.1;Name=WP_002208890.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208890.1;locus_tag=YPIP275_RS02105;product=siroheme synthase CysG;protein_id=WP_002208890.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 139497 140537 . - . ID=gene-YPIP275_RS02110;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=YPIP275_RS02110;old_locus_tag=YPIP275_4848 NZ_AAOS02000002.1 Protein Homology CDS 139497 140537 . - 0 ID=cds-WP_002208891.1;Parent=gene-YPIP275_RS02110;Dbxref=GenBank:WP_002208891.1;Name=WP_002208891.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105881.1;locus_tag=YPIP275_RS02110;product=tryptophan--tRNA ligase;protein_id=WP_002208891.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 140539 141237 . - . ID=gene-YPIP275_RS02115;Name=YPIP275_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02115;old_locus_tag=YPIP275_4849 NZ_AAOS02000002.1 Protein Homology CDS 140539 141237 . - 0 ID=cds-WP_002208892.1;Parent=gene-YPIP275_RS02115;Dbxref=GenBank:WP_002208892.1;Name=WP_002208892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011193233.1;locus_tag=YPIP275_RS02115;product=phosphoglycolate phosphatase;protein_id=WP_002208892.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 141230 141907 . - . ID=gene-YPIP275_RS02120;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=YPIP275_RS02120;old_locus_tag=YPIP275_4850 NZ_AAOS02000002.1 Protein Homology CDS 141230 141907 . - 0 ID=cds-WP_002215694.1;Parent=gene-YPIP275_RS02120;Dbxref=GenBank:WP_002215694.1;Name=WP_002215694.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215694.1;locus_tag=YPIP275_RS02120;product=ribulose-phosphate 3-epimerase;protein_id=WP_002215694.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 142210 143025 . - . ID=gene-YPIP275_RS02125;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=YPIP275_RS02125;old_locus_tag=YPIP275_4851 NZ_AAOS02000002.1 Protein Homology CDS 142210 143025 . - 0 ID=cds-WP_002208895.1;Parent=gene-YPIP275_RS02125;Dbxref=GenBank:WP_002208895.1;Name=WP_002208895.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208895.1;locus_tag=YPIP275_RS02125;product=adenine-specific DNA-methyltransferase;protein_id=WP_002208895.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 143109 144098 . - . ID=gene-YPIP275_RS02130;Name=YPIP275_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02130;old_locus_tag=YPIP275_4852 NZ_AAOS02000002.1 Protein Homology CDS 143109 144098 . - 0 ID=cds-WP_002208897.1;Parent=gene-YPIP275_RS02130;Dbxref=GenBank:WP_002208897.1;Name=WP_002208897.1;Ontology_term=GO:0042834,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906131.1;locus_tag=YPIP275_RS02130;product=SPOR domain-containing protein;protein_id=WP_002208897.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 144352 145440 . - . ID=gene-YPIP275_RS02135;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=YPIP275_RS02135;old_locus_tag=YPIP275_4853 NZ_AAOS02000002.1 Protein Homology CDS 144352 145440 . - 0 ID=cds-WP_002208898.1;Parent=gene-YPIP275_RS02135;Dbxref=GenBank:WP_002208898.1;Name=WP_002208898.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002226114.1;locus_tag=YPIP275_RS02135;product=3-dehydroquinate synthase;protein_id=WP_002208898.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 145497 146018 . - . ID=gene-YPIP275_RS02140;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=YPIP275_RS02140;old_locus_tag=YPIP275_4854 NZ_AAOS02000002.1 Protein Homology CDS 145497 146018 . - 0 ID=cds-WP_002208899.1;Parent=gene-YPIP275_RS02140;Dbxref=GenBank:WP_002208899.1;Name=WP_002208899.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=YPIP275_RS02140;product=shikimate kinase AroK;protein_id=WP_002208899.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 146367 147593 . - . ID=gene-YPIP275_RS02145;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS02145;old_locus_tag=YPIP275_4855 NZ_AAOS02000002.1 Protein Homology CDS 146367 147593 . - 0 ID=cds-WP_071525503.1;Parent=gene-YPIP275_RS02145;Dbxref=GenBank:WP_071525503.1;Name=WP_071525503.1;gbkey=CDS;gene=hofQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105882.1;locus_tag=YPIP275_RS02145;product=DNA uptake porin HofQ;protein_id=WP_071525503.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 147526 147915 . + . ID=gene-YPIP275_RS02150;Name=YPIP275_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02150;old_locus_tag=YPIP275_4856 NZ_AAOS02000002.1 Protein Homology CDS 147526 147915 . + 0 ID=cds-WP_002208901.1;Parent=gene-YPIP275_RS02150;Dbxref=GenBank:WP_002208901.1;Name=WP_002208901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208901.1;locus_tag=YPIP275_RS02150;product=hypothetical protein;protein_id=WP_002208901.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 147918 148277 . - . ID=gene-YPIP275_RS02155;Name=YPIP275_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02155 NZ_AAOS02000002.1 Protein Homology CDS 147918 148277 . - 0 ID=cds-WP_002223837.1;Parent=gene-YPIP275_RS02155;Dbxref=GenBank:WP_002223837.1;Name=WP_002223837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105883.1;locus_tag=YPIP275_RS02155;product=DNA utilization family protein;protein_id=WP_002223837.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 148312 148893 . - . ID=gene-YPIP275_RS02160;Name=YPIP275_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02160;old_locus_tag=YPIP275_4858 NZ_AAOS02000002.1 Protein Homology CDS 148312 148893 . - 0 ID=cds-WP_002217890.1;Parent=gene-YPIP275_RS02160;Dbxref=GenBank:WP_002217890.1;Name=WP_002217890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105884.1;locus_tag=YPIP275_RS02160;product=hypothetical protein;protein_id=WP_002217890.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 148886 149491 . - . ID=gene-YPIP275_RS02165;Name=YPIP275_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02165;old_locus_tag=YPIP275_4859 NZ_AAOS02000002.1 Protein Homology CDS 148886 149491 . - 0 ID=cds-WP_002208904.1;Parent=gene-YPIP275_RS02165;Dbxref=GenBank:WP_002208904.1;Name=WP_002208904.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105885.1;locus_tag=YPIP275_RS02165;product=PilN domain-containing protein;protein_id=WP_002208904.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 149491 150387 . - . ID=gene-YPIP275_RS02170;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=YPIP275_RS02170;old_locus_tag=YPIP275_4860 NZ_AAOS02000002.1 Protein Homology CDS 149491 150387 . - 0 ID=cds-WP_002208905.1;Parent=gene-YPIP275_RS02170;Dbxref=GenBank:WP_002208905.1;Name=WP_002208905.1;Ontology_term=GO:0043683,GO:0005524,GO:0046872;gbkey=CDS;gene=pilM;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105886.1;locus_tag=YPIP275_RS02170;product=type IV pilus biogenesis protein PilM;protein_id=WP_002208905.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 150507 153062 . + . ID=gene-YPIP275_RS02175;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02175;old_locus_tag=YPIP275_4861 NZ_AAOS02000002.1 Protein Homology CDS 150507 153062 . + 0 ID=cds-WP_002208906.1;Parent=gene-YPIP275_RS02175;Dbxref=GenBank:WP_002208906.1;Name=WP_002208906.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650557.1;locus_tag=YPIP275_RS02175;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_002208906.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 153198 153743 . - . ID=gene-YPIP275_RS02180;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=YPIP275_RS02180;old_locus_tag=YPIP275_4862 NZ_AAOS02000002.1 Protein Homology CDS 153198 153743 . - 0 ID=cds-WP_002208907.1;Parent=gene-YPIP275_RS02180;Dbxref=GenBank:WP_002208907.1;Name=WP_002208907.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208907.1;locus_tag=YPIP275_RS02180;product=ADP compounds hydrolase NudE;protein_id=WP_002208907.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 154330 156477 . + . ID=gene-YPIP275_RS02190;Name=YPIP275_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02190;old_locus_tag=YPIP275_4863 NZ_AAOS02000002.1 Protein Homology CDS 154330 156477 . + 0 ID=cds-WP_002208908.1;Parent=gene-YPIP275_RS02190;Dbxref=GenBank:WP_002208908.1;Name=WP_002208908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266575.1;locus_tag=YPIP275_RS02190;product=intracellular growth attenuator family protein;protein_id=WP_002208908.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 156621 157301 . + . ID=gene-YPIP275_RS02195;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=YPIP275_RS02195;old_locus_tag=YPIP275_4864 NZ_AAOS02000002.1 Protein Homology CDS 156621 157301 . + 0 ID=cds-WP_002208909.1;Parent=gene-YPIP275_RS02195;Dbxref=GenBank:WP_002208909.1;Name=WP_002208909.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014462187.1;locus_tag=YPIP275_RS02195;product=GMP/IMP nucleotidase;protein_id=WP_002208909.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 157330 157737 . + . ID=gene-YPIP275_RS02200;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=YPIP275_RS02200;old_locus_tag=YPIP275_4865 NZ_AAOS02000002.1 Protein Homology CDS 157330 157737 . + 0 ID=cds-WP_002208910.1;Parent=gene-YPIP275_RS02200;Dbxref=GenBank:WP_002208910.1;Name=WP_002208910.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012230110.1;locus_tag=YPIP275_RS02200;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_002208910.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 157900 158781 . + . ID=gene-YPIP275_RS02205;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=YPIP275_RS02205;old_locus_tag=YPIP275_4866 NZ_AAOS02000002.1 Protein Homology CDS 157900 158781 . + 0 ID=cds-WP_002208911.1;Parent=gene-YPIP275_RS02205;Dbxref=GenBank:WP_002208911.1;Name=WP_002208911.1;Ontology_term=GO:0006457;gbkey=CDS;gene=hslO;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303382.1;locus_tag=YPIP275_RS02205;product=Hsp33 family molecular chaperone HslO;protein_id=WP_002208911.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 158978 160597 . + . ID=gene-YPIP275_RS02210;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02210;old_locus_tag=YPIP275_4867 NZ_AAOS02000002.1 Protein Homology CDS 158978 160597 . + 0 ID=cds-WP_002208912.1;Parent=gene-YPIP275_RS02210;Dbxref=GenBank:WP_002208912.1;Name=WP_002208912.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002394031.1;locus_tag=YPIP275_RS02210;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_002208912.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 160732 162084 . - . ID=gene-YPIP275_RS02215;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=YPIP275_RS02215;old_locus_tag=YPIP275_4868 NZ_AAOS02000002.1 Protein Homology CDS 160732 162084 . - 0 ID=cds-WP_002208913.1;Parent=gene-YPIP275_RS02215;Dbxref=GenBank:WP_002208913.1;Name=WP_002208913.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208913.1;locus_tag=YPIP275_RS02215;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_002208913.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 162081 162800 . - . ID=gene-YPIP275_RS02220;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=YPIP275_RS02220;old_locus_tag=YPIP275_4869 NZ_AAOS02000002.1 Protein Homology CDS 162081 162800 . - 0 ID=cds-WP_002208914.1;Parent=gene-YPIP275_RS02220;Dbxref=GenBank:WP_002208914.1;Name=WP_002208914.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=YPIP275_RS02220;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_002208914.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 162936 163451 . - . ID=gene-YPIP275_RS02225;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=YPIP275_RS02225;old_locus_tag=YPIP275_4870 NZ_AAOS02000002.1 Protein Homology CDS 162936 163451 . - 0 ID=cds-WP_002208915.1;Parent=gene-YPIP275_RS02225;Dbxref=GenBank:WP_002208915.1;Name=WP_002208915.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208915.1;locus_tag=YPIP275_RS02225;product=transcription elongation factor GreB;protein_id=WP_002208915.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 163985 166360 . + . ID=gene-YPIP275_RS02230;Name=YPIP275_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02230;old_locus_tag=YPIP275_4871 NZ_AAOS02000002.1 Protein Homology CDS 163985 166360 . + 0 ID=cds-WP_002208916.1;Parent=gene-YPIP275_RS02230;Dbxref=GenBank:WP_002208916.1;Name=WP_002208916.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208916.1;locus_tag=YPIP275_RS02230;product=Tex family protein;protein_id=WP_002208916.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 166884 167111 . + . ID=gene-YPIP275_RS02240;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02240;old_locus_tag=YPIP275_4873 NZ_AAOS02000002.1 Protein Homology CDS 166884 167111 . + 0 ID=cds-WP_002208918.1;Parent=gene-YPIP275_RS02240;Dbxref=GenBank:WP_002208918.1;Name=WP_002208918.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208918.1;locus_tag=YPIP275_RS02240;product=ferrous iron transporter A;protein_id=WP_002208918.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 167203 169518 . + . ID=gene-YPIP275_RS02245;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=YPIP275_RS02245;old_locus_tag=YPIP275_4874 NZ_AAOS02000002.1 Protein Homology CDS 167203 169518 . + 0 ID=cds-WP_002208919.1;Parent=gene-YPIP275_RS02245;Dbxref=GenBank:WP_002208919.1;Name=WP_002208919.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906130.1;locus_tag=YPIP275_RS02245;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_002208919.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 169554 169811 . + . ID=gene-YPIP275_RS02250;Name=YPIP275_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02250;old_locus_tag=YPIP275_4875 NZ_AAOS02000002.1 Protein Homology CDS 169554 169811 . + 0 ID=cds-WP_002208920.1;Parent=gene-YPIP275_RS02250;Dbxref=GenBank:WP_002208920.1;Name=WP_002208920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208920.1;locus_tag=YPIP275_RS02250;product=FeoC-like transcriptional regulator;protein_id=WP_002208920.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 169949 170218 . - . ID=gene-YPIP275_RS02255;Name=YPIP275_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02255;old_locus_tag=YPIP275_4876 NZ_AAOS02000002.1 Protein Homology CDS 169949 170218 . - 0 ID=cds-WP_002208921.1;Parent=gene-YPIP275_RS02255;Dbxref=GenBank:WP_002208921.1;Name=WP_002208921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208921.1;locus_tag=YPIP275_RS02255;product=YdgH/BhsA/McbA family protein;protein_id=WP_002208921.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 170388 171164 . - . ID=gene-YPIP275_RS02260;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=YPIP275_RS02260;old_locus_tag=YPIP275_4877 NZ_AAOS02000002.1 Protein Homology CDS 170388 171164 . - 0 ID=cds-WP_002208922.1;Parent=gene-YPIP275_RS02260;Dbxref=GenBank:WP_002208922.1;Name=WP_002208922.1;Ontology_term=GO:0009102,GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016588104.1;locus_tag=YPIP275_RS02260;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_002208922.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 171251 171952 . + . ID=gene-YPIP275_RS02265;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=YPIP275_RS02265;old_locus_tag=YPIP275_4878 NZ_AAOS02000002.1 Protein Homology CDS 171251 171952 . + 0 ID=cds-WP_002208923.1;Parent=gene-YPIP275_RS02265;Dbxref=GenBank:WP_002208923.1;Name=WP_002208923.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208923.1;locus_tag=YPIP275_RS02265;product=DNA utilization protein GntX;protein_id=WP_002208923.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 172012 172587 . + . ID=gene-YPIP275_RS02270;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02270;old_locus_tag=YPIP275_4879 NZ_AAOS02000002.1 Protein Homology CDS 172012 172587 . + 0 ID=cds-WP_002208924.1;Parent=gene-YPIP275_RS02270;Dbxref=GenBank:WP_002208924.1;Name=WP_002208924.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=YPIP275_RS02270;product=Fe-S biogenesis protein NfuA;protein_id=WP_002208924.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 172916 175012 . - . ID=gene-YPIP275_RS02275;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS02275;old_locus_tag=YPIP275_4880 NZ_AAOS02000002.1 Protein Homology CDS 172916 175012 . - 0 ID=cds-WP_002208925.1;Parent=gene-YPIP275_RS02275;Dbxref=GenBank:WP_002208925.1;Name=WP_002208925.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208925.1;locus_tag=YPIP275_RS02275;product=4-alpha-glucanotransferase;protein_id=WP_002208925.1;transl_table=11 NZ_AAOS02000002.1 RefSeq pseudogene 175025 177429 . - . ID=gene-YPIP275_RS02280;Name=malP;gbkey=Gene;gene=malP;gene_biotype=pseudogene;locus_tag=YPIP275_RS02280;old_locus_tag=YPIP275_4881;pseudo=true NZ_AAOS02000002.1 Protein Homology CDS 175025 177429 . - 0 ID=cds-YPIP275_RS02280;Parent=gene-YPIP275_RS02280;Note=frameshifted;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121618.1;locus_tag=YPIP275_RS02280;product=maltodextrin phosphorylase;pseudo=true;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 177747 180458 . + . ID=gene-YPIP275_RS02290;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=YPIP275_RS02290;old_locus_tag=YPIP275_4882 NZ_AAOS02000002.1 Protein Homology CDS 177747 180458 . + 0 ID=cds-WP_002208926.1;Parent=gene-YPIP275_RS02290;Dbxref=GenBank:WP_002208926.1;Name=WP_002208926.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081554.1;locus_tag=YPIP275_RS02290;product=HTH-type transcriptional regulator MalT;protein_id=WP_002208926.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 180833 181162 . + . ID=gene-YPIP275_RS02295;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=YPIP275_RS02295;old_locus_tag=YPIP275_4884 NZ_AAOS02000002.1 Protein Homology CDS 180833 181162 . + 0 ID=cds-WP_002208928.1;Parent=gene-YPIP275_RS02295;Dbxref=GenBank:WP_002208928.1;Name=WP_002208928.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208928.1;locus_tag=YPIP275_RS02295;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_002208928.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 181180 182016 . + . ID=gene-YPIP275_RS02300;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=YPIP275_RS02300;old_locus_tag=YPIP275_4885 NZ_AAOS02000002.1 Protein Homology CDS 181180 182016 . + 0 ID=cds-WP_002216348.1;Parent=gene-YPIP275_RS02300;Dbxref=GenBank:WP_002216348.1;Name=WP_002216348.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016261743.1;locus_tag=YPIP275_RS02300;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_002216348.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 182051 182809 . + . ID=gene-YPIP275_RS02305;Name=YPIP275_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02305;old_locus_tag=YPIP275_4886 NZ_AAOS02000002.1 Protein Homology CDS 182051 182809 . + 0 ID=cds-WP_002208930.1;Parent=gene-YPIP275_RS02305;Dbxref=GenBank:WP_002208930.1;Name=WP_002208930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009635717.1;locus_tag=YPIP275_RS02305;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_002208930.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 183002 184356 . + . ID=gene-YPIP275_RS28395;Name=YPIP275_RS28395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28395 NZ_AAOS02000002.1 Protein Homology CDS 183002 183452 . + 0 ID=cds-WP_100067904.1-6;Parent=gene-YPIP275_RS28395;Dbxref=GenBank:WP_100067904.1;Name=WP_100067904.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558220.1;locus_tag=YPIP275_RS28395;product=IS3-like element IS1661 family transposase;protein_id=WP_100067904.1;transl_table=11 NZ_AAOS02000002.1 Protein Homology CDS 183452 184356 . + 2 ID=cds-WP_100067904.1-6;Parent=gene-YPIP275_RS28395;Dbxref=GenBank:WP_100067904.1;Name=WP_100067904.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558220.1;locus_tag=YPIP275_RS28395;product=IS3-like element IS1661 family transposase;protein_id=WP_100067904.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 184534 185418 . - . ID=gene-YPIP275_RS02320;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=YPIP275_RS02320;old_locus_tag=YPIP275_4889 NZ_AAOS02000002.1 Protein Homology CDS 184534 185418 . - 0 ID=cds-WP_002208933.1;Parent=gene-YPIP275_RS02320;Dbxref=GenBank:WP_002208933.1;Name=WP_002208933.1;Ontology_term=GO:0071265,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208933.1;locus_tag=YPIP275_RS02320;product=methylenetetrahydrofolate reductase;protein_id=WP_002208933.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 185651 188086 . - . ID=gene-YPIP275_RS02325;Name=YPIP275_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02325;old_locus_tag=YPIP275_4890 NZ_AAOS02000002.1 Protein Homology CDS 185651 188086 . - 0 ID=cds-WP_002208934.1;Parent=gene-YPIP275_RS02325;Dbxref=GenBank:WP_002208934.1;Name=WP_002208934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649013.1;locus_tag=YPIP275_RS02325;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_002208934.1;transl_table=11 NZ_AAOS02000002.1 RefSeq pseudogene 188089 189248 . - . ID=gene-YPIP275_RS02330;Name=metB;gbkey=Gene;gene=metB;gene_biotype=pseudogene;locus_tag=YPIP275_RS02330;old_locus_tag=YPIP275_4891;pseudo=true NZ_AAOS02000002.1 Protein Homology CDS 188089 189248 . - 0 ID=cds-YPIP275_RS02330;Parent=gene-YPIP275_RS02330;Note=frameshifted;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019452240.1;locus_tag=YPIP275_RS02330;product=cystathionine gamma-synthase;pseudo=true;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 189626 189943 . + . ID=gene-YPIP275_RS02335;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS02335;old_locus_tag=YPIP275_4892 NZ_AAOS02000002.1 Protein Homology CDS 189626 189943 . + 0 ID=cds-WP_002208935.1;Parent=gene-YPIP275_RS02335;Dbxref=GenBank:WP_002208935.1;Name=WP_002208935.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=YPIP275_RS02335;product=met regulon transcriptional regulator MetJ;protein_id=WP_002208935.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 190292 190747 . + . ID=gene-YPIP275_RS02345;Name=yiaA;gbkey=Gene;gene=yiaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02345;old_locus_tag=YPIP275_4893 NZ_AAOS02000002.1 Protein Homology CDS 190292 190747 . + 0 ID=cds-WP_002208936.1;Parent=gene-YPIP275_RS02345;Dbxref=GenBank:WP_002208936.1;Name=WP_002208936.1;gbkey=CDS;gene=yiaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208936.1;locus_tag=YPIP275_RS02345;product=inner membrane protein YiaA;protein_id=WP_002208936.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 191290 191505 . - . ID=gene-YPIP275_RS02350;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=YPIP275_RS02350;old_locus_tag=YPIP275_4894 NZ_AAOS02000002.1 Protein Homology CDS 191290 191505 . - 0 ID=cds-WP_002216737.1;Parent=gene-YPIP275_RS02350;Dbxref=GenBank:WP_002216737.1;Name=WP_002216737.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847674.1;locus_tag=YPIP275_RS02350;product=50S ribosomal protein L31;protein_id=WP_002216737.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 191748 193946 . + . ID=gene-YPIP275_RS02355;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02355;old_locus_tag=YPIP275_4895 NZ_AAOS02000002.1 Protein Homology CDS 191748 193946 . + 0 ID=cds-WP_002208938.1;Parent=gene-YPIP275_RS02355;Dbxref=GenBank:WP_002208938.1;Name=WP_002208938.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175847.1;locus_tag=YPIP275_RS02355;product=primosomal protein N';protein_id=WP_002208938.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 194033 194176 . + . ID=gene-YPIP275_RS02360;Name=YPIP275_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02360 NZ_AAOS02000002.1 Protein Homology CDS 194033 194176 . + 0 ID=cds-WP_002216732.1;Parent=gene-YPIP275_RS02360;Dbxref=GenBank:WP_002216732.1;Name=WP_002216732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216732.1;locus_tag=YPIP275_RS02360;product=hypothetical protein;protein_id=WP_002216732.1;transl_table=11 NZ_AAOS02000002.1 RefSeq pseudogene 194299 194496 . + . ID=gene-YPIP275_RS02365;Name=YPIP275_RS02365;end_range=194496,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS02365;old_locus_tag=YPIP275_4896;partial=true;pseudo=true NZ_AAOS02000002.1 Protein Homology CDS 194299 194496 . + 0 ID=cds-YPIP275_RS02365;Parent=gene-YPIP275_RS02365;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677;end_range=194496,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216730.1;locus_tag=YPIP275_RS02365;partial=true;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 194604 195062 . - . ID=gene-YPIP275_RS02370;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02370;old_locus_tag=YPIP275_4897 NZ_AAOS02000002.1 Protein Homology CDS 194604 195062 . - 0 ID=cds-WP_002213759.1-30;Parent=gene-YPIP275_RS02370;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS02370;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000002.1 RefSeq pseudogene 195205 196038 . + . ID=gene-YPIP275_RS02375;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=pseudogene;locus_tag=YPIP275_RS02375;old_locus_tag=YPIP275_4898;partial=true;pseudo=true;start_range=.,195205 NZ_AAOS02000002.1 Protein Homology CDS 195205 196038 . + 0 ID=cds-YPIP275_RS02375;Parent=gene-YPIP275_RS02375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216730.1;locus_tag=YPIP275_RS02375;partial=true;product=DNA-binding transcriptional regulator CytR;pseudo=true;start_range=.,195205;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 196104 196949 . + . ID=gene-YPIP275_RS02380;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=YPIP275_RS02380;old_locus_tag=YPIP275_4899 NZ_AAOS02000002.1 Protein Homology CDS 196104 196949 . + 0 ID=cds-WP_002208941.1;Parent=gene-YPIP275_RS02380;Dbxref=GenBank:WP_002208941.1;Name=WP_002208941.1;Ontology_term=GO:0000910,GO:0005515;gbkey=CDS;gene=ftsN;go_function=protein binding|0005515||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208941.1;locus_tag=YPIP275_RS02380;product=cell division protein FtsN;protein_id=WP_002208941.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 197049 197573 . + . ID=gene-YPIP275_RS02385;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=YPIP275_RS02385;old_locus_tag=YPIP275_4900 NZ_AAOS02000002.1 Protein Homology CDS 197049 197573 . + 0 ID=cds-WP_002208942.1;Parent=gene-YPIP275_RS02385;Dbxref=GenBank:WP_002208942.1;Name=WP_002208942.1;Ontology_term=GO:0030163,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279166.1;locus_tag=YPIP275_RS02385;product=ATP-dependent protease subunit HslV;protein_id=WP_002208942.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 197644 198975 . + . ID=gene-YPIP275_RS02390;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=YPIP275_RS02390;old_locus_tag=YPIP275_4901 NZ_AAOS02000002.1 Protein Homology CDS 197644 198975 . + 0 ID=cds-WP_002208943.1;Parent=gene-YPIP275_RS02390;Dbxref=GenBank:WP_002208943.1;Name=WP_002208943.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=YPIP275_RS02390;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_002208943.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 199211 200128 . + . ID=gene-YPIP275_RS02395;Name=YPIP275_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02395;old_locus_tag=YPIP275_4902 NZ_AAOS02000002.1 Protein Homology CDS 199211 200128 . + 0 ID=cds-WP_002208944.1;Parent=gene-YPIP275_RS02395;Dbxref=GenBank:WP_002208944.1;Name=WP_002208944.1;Ontology_term=GO:0009234,GO:0046428,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208944.1;locus_tag=YPIP275_RS02395;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_002208944.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 200270 200755 . + . ID=gene-YPIP275_RS02400;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02400;old_locus_tag=YPIP275_4903 NZ_AAOS02000002.1 Protein Homology CDS 200270 200755 . + 0 ID=cds-WP_002208945.1;Parent=gene-YPIP275_RS02400;Dbxref=GenBank:WP_002208945.1;Name=WP_002208945.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=YPIP275_RS02400;product=ribonuclease E activity regulator RraA;protein_id=WP_002208945.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 200872 201405 . - . ID=gene-YPIP275_RS02405;Name=YPIP275_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02405;old_locus_tag=YPIP275_4904 NZ_AAOS02000002.1 Protein Homology CDS 200872 201405 . - 0 ID=cds-WP_002208946.1;Parent=gene-YPIP275_RS02405;Dbxref=GenBank:WP_002208946.1;Name=WP_002208946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208946.1;locus_tag=YPIP275_RS02405;product=DUF4232 domain-containing protein;protein_id=WP_002208946.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 202086 202325 . - . ID=gene-YPIP275_RS02415;Name=YPIP275_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02415;old_locus_tag=YPIP275_4906 NZ_AAOS02000002.1 Protein Homology CDS 202086 202325 . - 0 ID=cds-WP_002215873.1;Parent=gene-YPIP275_RS02415;Dbxref=GenBank:WP_002215873.1;Name=WP_002215873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215873.1;locus_tag=YPIP275_RS02415;product=hypothetical protein;protein_id=WP_002215873.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 202538 203830 . + . ID=gene-YPIP275_RS02420;Name=YPIP275_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02420;old_locus_tag=YPIP275_4907 NZ_AAOS02000002.1 Protein Homology CDS 202538 203830 . + 0 ID=cds-WP_002208949.1;Parent=gene-YPIP275_RS02420;Dbxref=GenBank:WP_002208949.1;Name=WP_002208949.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208949.1;locus_tag=YPIP275_RS02420;product=HlyD family secretion protein;protein_id=WP_002208949.1;transl_table=11 NZ_AAOS02000002.1 RefSeq pseudogene 203823 204656 . + . ID=gene-YPIP275_RS02425;Name=YPIP275_RS02425;end_range=204656,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS02425;old_locus_tag=YPIP275_4908;partial=true;pseudo=true NZ_AAOS02000002.1 Protein Homology CDS 203823 204656 . + 0 ID=cds-YPIP275_RS02425;Parent=gene-YPIP275_RS02425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006508,GO:0005524,GO:0008233,GO:0016020;end_range=204656,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230357.1;locus_tag=YPIP275_RS02425;partial=true;product=cysteine peptidase family C39 domain-containing protein;pseudo=true;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 204742 205764 . + . ID=gene-YPIP275_RS02430;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02430;old_locus_tag=YPIP275_4909 NZ_AAOS02000002.1 Protein Homology CDS 204742 205764 . + 0 ID=cds-WP_000255944.1-42;Parent=gene-YPIP275_RS02430;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS02430;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 205761 206543 . + . ID=gene-YPIP275_RS02435;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS02435;old_locus_tag=YPIP275_4910 NZ_AAOS02000002.1 Protein Homology CDS 205761 206543 . + 0 ID=cds-WP_001317493.1-48;Parent=gene-YPIP275_RS02435;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS02435;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000002.1 RefSeq pseudogene 206608 207897 . + . ID=gene-YPIP275_RS02440;Name=YPIP275_RS02440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS02440;old_locus_tag=YPIP275_4912;partial=true;pseudo=true;start_range=.,206608 NZ_AAOS02000002.1 Protein Homology CDS 206608 207897 . + 0 ID=cds-YPIP275_RS02440;Parent=gene-YPIP275_RS02440;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230357.1;locus_tag=YPIP275_RS02440;partial=true;product=peptidase domain-containing ABC transporter;pseudo=true;start_range=.,206608;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 208275 208733 . + . ID=gene-YPIP275_RS02445;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02445;old_locus_tag=YPIP275_4913 NZ_AAOS02000002.1 Protein Homology CDS 208275 208733 . + 0 ID=cds-WP_002213759.1-31;Parent=gene-YPIP275_RS02445;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS02445;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 208941 209180 . - . ID=gene-YPIP275_RS02450;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=YPIP275_RS02450;old_locus_tag=YPIP275_4914 NZ_AAOS02000002.1 Protein Homology CDS 208941 209180 . - 0 ID=cds-WP_002208953.1;Parent=gene-YPIP275_RS02450;Dbxref=GenBank:WP_002208953.1;Name=WP_002208953.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114846.1;locus_tag=YPIP275_RS02450;product=septal ring assembly protein ZapB;protein_id=WP_002208953.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 209808 210656 . + . ID=gene-YPIP275_RS02460;Name=YPIP275_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02460;old_locus_tag=YPIP275_4915 NZ_AAOS02000002.1 Protein Homology CDS 209808 210656 . + 0 ID=cds-WP_002208954.1;Parent=gene-YPIP275_RS02460;Dbxref=GenBank:WP_002208954.1;Name=WP_002208954.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266314.1;locus_tag=YPIP275_RS02460;product=MIP/aquaporin family protein;protein_id=WP_002208954.1;transl_table=11 NZ_AAOS02000002.1 RefSeq pseudogene 210833 212309 . + . ID=gene-YPIP275_RS02465;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=pseudogene;locus_tag=YPIP275_RS02465;old_locus_tag=YPIP275_4916;pseudo=true NZ_AAOS02000002.1 Protein Homology CDS 210833 212309 . + 0 ID=cds-YPIP275_RS02465;Parent=gene-YPIP275_RS02465;Note=frameshifted;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710532.1;locus_tag=YPIP275_RS02465;product=glycerol kinase GlpK;pseudo=true;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 212546 213556 . + . ID=gene-YPIP275_RS02470;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=YPIP275_RS02470;old_locus_tag=YPIP275_4917 NZ_AAOS02000002.1 Protein Homology CDS 212546 213556 . + 0 ID=cds-WP_002223912.1;Parent=gene-YPIP275_RS02470;Dbxref=GenBank:WP_002223912.1;Name=WP_002223912.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229467.1;locus_tag=YPIP275_RS02470;product=class II fructose-bisphosphatase;protein_id=WP_002223912.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 213711 214457 . + . ID=gene-YPIP275_RS02475;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=YPIP275_RS02475;old_locus_tag=YPIP275_4918 NZ_AAOS02000002.1 Protein Homology CDS 213711 214457 . + 0 ID=cds-WP_002208956.1;Parent=gene-YPIP275_RS02475;Dbxref=GenBank:WP_002208956.1;Name=WP_002208956.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208956.1;locus_tag=YPIP275_RS02475;product=ferredoxin--NADP(+) reductase;protein_id=WP_002208956.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 214798 215232 . - . ID=gene-YPIP275_RS02480;Name=YPIP275_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02480;old_locus_tag=YPIP275_4919 NZ_AAOS02000002.1 Protein Homology CDS 214798 215232 . - 0 ID=cds-WP_002208957.1;Parent=gene-YPIP275_RS02480;Dbxref=GenBank:WP_002208957.1;Name=WP_002208957.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175880.1;locus_tag=YPIP275_RS02480;product=DUF805 domain-containing protein;protein_id=WP_002208957.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 215401 216015 . + . ID=gene-YPIP275_RS02485;Name=YPIP275_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02485;old_locus_tag=YPIP275_4920 NZ_AAOS02000002.1 Protein Homology CDS 215401 216015 . + 0 ID=cds-WP_002208958.1;Parent=gene-YPIP275_RS02485;Dbxref=GenBank:WP_002208958.1;Name=WP_002208958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208958.1;locus_tag=YPIP275_RS02485;product=DUF1454 family protein;protein_id=WP_002208958.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 216144 216911 . + . ID=gene-YPIP275_RS02490;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02490;old_locus_tag=YPIP275_4921 NZ_AAOS02000002.1 Protein Homology CDS 216144 216911 . + 0 ID=cds-WP_002208959.1;Parent=gene-YPIP275_RS02490;Dbxref=GenBank:WP_002208959.1;Name=WP_002208959.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175887.1;locus_tag=YPIP275_RS02490;product=triose-phosphate isomerase;protein_id=WP_002208959.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 217143 218378 . - . ID=gene-YPIP275_RS02495;Name=YPIP275_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02495;old_locus_tag=YPIP275_4922 NZ_AAOS02000002.1 Protein Homology CDS 217143 218378 . - 0 ID=cds-WP_002208960.1;Parent=gene-YPIP275_RS02495;Dbxref=GenBank:WP_002208960.1;Name=WP_002208960.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208960.1;locus_tag=YPIP275_RS02495;product=LysR family transcriptional regulator;protein_id=WP_002208960.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 218515 219252 . + . ID=gene-YPIP275_RS02500;Name=YPIP275_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02500;old_locus_tag=YPIP275_4923 NZ_AAOS02000002.1 Protein Homology CDS 218515 219252 . + 0 ID=cds-WP_002208961.1;Parent=gene-YPIP275_RS02500;Dbxref=GenBank:WP_002208961.1;Name=WP_002208961.1;Ontology_term=GO:0019213;gbkey=CDS;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356630.1;locus_tag=YPIP275_RS02500;product=PIG-L deacetylase family protein;protein_id=WP_002208961.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 219249 219962 . + . ID=gene-YPIP275_RS02505;Name=YPIP275_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02505;old_locus_tag=YPIP275_4924 NZ_AAOS02000002.1 Protein Homology CDS 219249 219962 . + 0 ID=cds-WP_002208962.1;Parent=gene-YPIP275_RS02505;Dbxref=GenBank:WP_002208962.1;Name=WP_002208962.1;Ontology_term=GO:0047443;gbkey=CDS;go_function=4-hydroxy-4-methyl-2-oxoglutarate aldolase activity|0047443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208962.1;locus_tag=YPIP275_RS02505;product=4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase;protein_id=WP_002208962.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 220028 221455 . + . ID=gene-YPIP275_RS02510;Name=YPIP275_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02510;old_locus_tag=YPIP275_4925 NZ_AAOS02000002.1 Protein Homology CDS 220028 221455 . + 0 ID=cds-WP_002208963.1;Parent=gene-YPIP275_RS02510;Dbxref=GenBank:WP_002208963.1;Name=WP_002208963.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304755.1;locus_tag=YPIP275_RS02510;product=anion permease;protein_id=WP_002208963.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 221573 222349 . + . ID=gene-YPIP275_RS02515;Name=YPIP275_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02515;old_locus_tag=YPIP275_4926 NZ_AAOS02000002.1 Protein Homology CDS 221573 222349 . + 0 ID=cds-WP_002218867.1;Parent=gene-YPIP275_RS02515;Dbxref=GenBank:WP_002218867.1;Name=WP_002218867.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016257829.1;locus_tag=YPIP275_RS02515;product=substrate-binding domain-containing protein;protein_id=WP_002218867.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 222599 223588 . - . ID=gene-YPIP275_RS02520;Name=YPIP275_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02520;old_locus_tag=YPIP275_4927 NZ_AAOS02000002.1 Protein Homology CDS 222599 223588 . - 0 ID=cds-WP_002208965.1;Parent=gene-YPIP275_RS02520;Dbxref=GenBank:WP_002208965.1;Name=WP_002208965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418352.1;locus_tag=YPIP275_RS02520;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_002208965.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 223809 224792 . - . ID=gene-YPIP275_RS02525;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02525;old_locus_tag=YPIP275_4928 NZ_AAOS02000002.1 Protein Homology CDS 223809 224792 . - 0 ID=cds-WP_002208966.1;Parent=gene-YPIP275_RS02525;Dbxref=GenBank:WP_002208966.1;Name=WP_002208966.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224375.1;locus_tag=YPIP275_RS02525;product=6-phosphofructokinase;protein_id=WP_002208966.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 225010 225912 . - . ID=gene-YPIP275_RS02530;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=YPIP275_RS02530;old_locus_tag=YPIP275_4929 NZ_AAOS02000002.1 Protein Homology CDS 225010 225912 . - 0 ID=cds-WP_002208967.1;Parent=gene-YPIP275_RS02530;Dbxref=GenBank:WP_002208967.1;Name=WP_002208967.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0030001,GO:0055085,GO:0008324,GO:0046873,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=monoatomic cation transport|0006812||IEA,metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208967.1;locus_tag=YPIP275_RS02530;product=CDF family cation-efflux transporter FieF;protein_id=WP_002208967.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 226474 227394 . - . ID=gene-YPIP275_RS02535;Name=YPIP275_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02535;old_locus_tag=YPIP275_4931 NZ_AAOS02000002.1 Protein Homology CDS 226474 227394 . - 0 ID=cds-WP_002353252.1;Parent=gene-YPIP275_RS02535;Dbxref=GenBank:WP_002353252.1;Name=WP_002353252.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004536,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA nuclease activity|0004536||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353252.1;locus_tag=YPIP275_RS02535;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_002353252.1;transl_table=11 NZ_AAOS02000002.1 RefSeq pseudogene 227621 227953 . + . ID=gene-YPIP275_RS26740;Name=YPIP275_RS26740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS26740;partial=true;pseudo=true;start_range=.,227621 NZ_AAOS02000002.1 Protein Homology CDS 227621 227953 . + 0 ID=cds-YPIP275_RS26740;Parent=gene-YPIP275_RS26740;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266554.1;locus_tag=YPIP275_RS26740;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,227621;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 228111 228599 . - . ID=gene-YPIP275_RS02540;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=YPIP275_RS02540;old_locus_tag=YPIP275_4932 NZ_AAOS02000002.1 Protein Homology CDS 228111 228599 . - 0 ID=cds-WP_002208969.1;Parent=gene-YPIP275_RS02540;Dbxref=GenBank:WP_002208969.1;Name=WP_002208969.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191457.1;locus_tag=YPIP275_RS02540;product=cell-envelope stress modulator CpxP;protein_id=WP_002208969.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 228773 229471 . + . ID=gene-YPIP275_RS02545;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=YPIP275_RS02545;old_locus_tag=YPIP275_4933 NZ_AAOS02000002.1 Protein Homology CDS 228773 229471 . + 0 ID=cds-WP_002208970.1;Parent=gene-YPIP275_RS02545;Dbxref=GenBank:WP_002208970.1;Name=WP_002208970.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208970.1;locus_tag=YPIP275_RS02545;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_002208970.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 229468 230844 . + . ID=gene-YPIP275_RS02550;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02550;old_locus_tag=YPIP275_4934 NZ_AAOS02000002.1 Protein Homology CDS 229468 230844 . + 0 ID=cds-WP_002208971.1;Parent=gene-YPIP275_RS02550;Dbxref=GenBank:WP_002208971.1;Name=WP_002208971.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208971.1;locus_tag=YPIP275_RS02550;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_002208971.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 230893 231957 . - . ID=gene-YPIP275_RS02555;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=YPIP275_RS02555;old_locus_tag=YPIP275_4935 NZ_AAOS02000002.1 Protein Homology CDS 230893 231957 . - 0 ID=cds-WP_002208972.1;Parent=gene-YPIP275_RS02555;Dbxref=GenBank:WP_002208972.1;Name=WP_002208972.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016604261.1;locus_tag=YPIP275_RS02555;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_002208972.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 232146 232634 . + . ID=gene-YPIP275_RS02560;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=YPIP275_RS02560;old_locus_tag=YPIP275_4936 NZ_AAOS02000002.1 Protein Homology CDS 232146 232634 . + 0 ID=cds-WP_002208973.1;Parent=gene-YPIP275_RS02560;Dbxref=GenBank:WP_002208973.1;Name=WP_002208973.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004705053.1;locus_tag=YPIP275_RS02560;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_002208973.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 232757 233578 . - . ID=gene-YPIP275_RS02565;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=YPIP275_RS02565;old_locus_tag=YPIP275_4937 NZ_AAOS02000002.1 Protein Homology CDS 232757 233578 . - 0 ID=cds-WP_002208974.1;Parent=gene-YPIP275_RS02565;Dbxref=GenBank:WP_002208974.1;Name=WP_002208974.1;Ontology_term=GO:0019344,GO:0009001;gbkey=CDS;gene=cysE;go_function=L-serine O-acetyltransferase activity|0009001||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815007.1;locus_tag=YPIP275_RS02565;product=serine O-acetyltransferase;protein_id=WP_002208974.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 233844 234863 . - . ID=gene-YPIP275_RS02575;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02575;old_locus_tag=YPIP275_4938 NZ_AAOS02000002.1 Protein Homology CDS 233844 234863 . - 0 ID=cds-WP_002208975.1;Parent=gene-YPIP275_RS02575;Dbxref=GenBank:WP_002208975.1;Name=WP_002208975.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002361564.1;locus_tag=YPIP275_RS02575;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_002208975.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 234863 235339 . - . ID=gene-YPIP275_RS02580;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=YPIP275_RS02580;old_locus_tag=YPIP275_4939 NZ_AAOS02000002.1 Protein Homology CDS 234863 235339 . - 0 ID=cds-WP_002208976.1;Parent=gene-YPIP275_RS02580;Dbxref=GenBank:WP_002208976.1;Name=WP_002208976.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014913761.1;locus_tag=YPIP275_RS02580;product=protein-export chaperone SecB;protein_id=WP_002208976.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 235427 235675 . - . ID=gene-YPIP275_RS02585;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=YPIP275_RS02585;old_locus_tag=YPIP275_4940 NZ_AAOS02000002.1 Protein Homology CDS 235427 235675 . - 0 ID=cds-WP_002208977.1;Parent=gene-YPIP275_RS02585;Dbxref=GenBank:WP_002208977.1;Name=WP_002208977.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016266853.1;locus_tag=YPIP275_RS02585;product=glutaredoxin 3;protein_id=WP_002208977.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 235794 236228 . - . ID=gene-YPIP275_RS02590;Name=YPIP275_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02590;old_locus_tag=YPIP275_4941 NZ_AAOS02000002.1 Protein Homology CDS 235794 236228 . - 0 ID=cds-WP_002208978.1;Parent=gene-YPIP275_RS02590;Dbxref=GenBank:WP_002208978.1;Name=WP_002208978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005273648.1;locus_tag=YPIP275_RS02590;product=rhodanese-like domain-containing protein;protein_id=WP_002208978.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 236625 238172 . + . ID=gene-YPIP275_RS02595;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=YPIP275_RS02595;old_locus_tag=YPIP275_4942 NZ_AAOS02000002.1 Protein Homology CDS 236625 238172 . + 0 ID=cds-WP_002208979.1;Parent=gene-YPIP275_RS02595;Dbxref=GenBank:WP_002208979.1;Name=WP_002208979.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229416.1;locus_tag=YPIP275_RS02595;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_002208979.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 238257 239552 . + . ID=gene-YPIP275_RS02600;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=YPIP275_RS02600;old_locus_tag=YPIP275_4943 NZ_AAOS02000002.1 Protein Homology CDS 238257 239552 . + 0 ID=cds-WP_370696089.1;Parent=gene-YPIP275_RS02600;Dbxref=GenBank:WP_370696089.1;Name=WP_370696089.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004876924.1;locus_tag=YPIP275_RS02600;product=murein hydrolase activator EnvC;protein_id=WP_370696089.1;transl_table=11 NZ_AAOS02000002.1 RefSeq pseudogene 239576 240510 . + . ID=gene-YPIP275_RS02605;Name=YPIP275_RS02605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS02605;old_locus_tag=YPIP275_4944;pseudo=true NZ_AAOS02000002.1 Protein Homology CDS 239576 240510 . + 0 ID=cds-YPIP275_RS02605;Parent=gene-YPIP275_RS02605;Note=frameshifted;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191452.1;locus_tag=YPIP275_RS02605;product=divergent polysaccharide deacetylase family protein;pseudo=true;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 240648 241673 . - . ID=gene-YPIP275_RS02610;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=YPIP275_RS02610;old_locus_tag=YPIP275_4945 NZ_AAOS02000002.1 Protein Homology CDS 240648 241673 . - 0 ID=cds-WP_002208981.1;Parent=gene-YPIP275_RS02610;Dbxref=GenBank:WP_002208981.1;Name=WP_002208981.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=YPIP275_RS02610;product=L-threonine 3-dehydrogenase;protein_id=WP_002208981.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 241683 242894 . - . ID=gene-YPIP275_RS02615;Name=YPIP275_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02615;old_locus_tag=YPIP275_4946 NZ_AAOS02000002.1 Protein Homology CDS 241683 242894 . - 0 ID=cds-WP_002208982.1;Parent=gene-YPIP275_RS02615;Dbxref=GenBank:WP_002208982.1;Name=WP_002208982.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104268.1;locus_tag=YPIP275_RS02615;product=glycine C-acetyltransferase;protein_id=WP_002208982.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 243140 244072 . + . ID=gene-YPIP275_RS02620;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=YPIP275_RS02620;old_locus_tag=YPIP275_4947 NZ_AAOS02000002.1 Protein Homology CDS 243140 244072 . + 0 ID=cds-WP_002208983.1;Parent=gene-YPIP275_RS02620;Dbxref=GenBank:WP_002208983.1;Name=WP_002208983.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080305.1;locus_tag=YPIP275_RS02620;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_002208983.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 244103 245167 . + . ID=gene-YPIP275_RS02625;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=YPIP275_RS02625;old_locus_tag=YPIP275_4948 NZ_AAOS02000002.1 Protein Homology CDS 244103 245167 . + 0 ID=cds-WP_002208984.1;Parent=gene-YPIP275_RS02625;Dbxref=GenBank:WP_002208984.1;Name=WP_002208984.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208984.1;locus_tag=YPIP275_RS02625;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_002208984.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 245167 246132 . + . ID=gene-YPIP275_RS02630;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=YPIP275_RS02630;old_locus_tag=YPIP275_4949 NZ_AAOS02000002.1 Protein Homology CDS 245167 246132 . + 0 ID=cds-WP_002208985.1;Parent=gene-YPIP275_RS02630;Dbxref=GenBank:WP_002208985.1;Name=WP_002208985.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208985.1;locus_tag=YPIP275_RS02630;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_002208985.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 246552 247829 . + . ID=gene-YPIP275_RS02635;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02635;old_locus_tag=YPIP275_4950 NZ_AAOS02000002.1 Protein Homology CDS 246552 247829 . + 0 ID=cds-WP_002208986.1;Parent=gene-YPIP275_RS02635;Dbxref=GenBank:WP_002208986.1;Name=WP_002208986.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013648993.1;locus_tag=YPIP275_RS02635;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_002208986.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 247830 248612 . + . ID=gene-YPIP275_RS02640;Name=YPIP275_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02640;old_locus_tag=YPIP275_4951 NZ_AAOS02000002.1 Protein Homology CDS 247830 248612 . + 0 ID=cds-WP_002208987.1;Parent=gene-YPIP275_RS02640;Dbxref=GenBank:WP_002208987.1;Name=WP_002208987.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208987.1;locus_tag=YPIP275_RS02640;product=glycosyltransferase family 2 protein;protein_id=WP_002208987.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 248609 249088 . + . ID=gene-YPIP275_RS02645;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=YPIP275_RS02645;old_locus_tag=YPIP275_4952 NZ_AAOS02000002.1 Protein Homology CDS 248609 249088 . + 0 ID=cds-WP_002208988.1;Parent=gene-YPIP275_RS02645;Dbxref=GenBank:WP_002208988.1;Name=WP_002208988.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104267.1;locus_tag=YPIP275_RS02645;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_002208988.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 249094 249903 . - . ID=gene-YPIP275_RS02650;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=YPIP275_RS02650;old_locus_tag=YPIP275_4953 NZ_AAOS02000002.1 Protein Homology CDS 249094 249903 . - 0 ID=cds-WP_002208989.1;Parent=gene-YPIP275_RS02650;Dbxref=GenBank:WP_002208989.1;Name=WP_002208989.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710476.1;locus_tag=YPIP275_RS02650;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_002208989.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 249986 250153 . - . ID=gene-YPIP275_RS02655;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=YPIP275_RS02655;old_locus_tag=YPIP275_4954 NZ_AAOS02000002.1 Protein Homology CDS 249986 250153 . - 0 ID=cds-WP_002208990.1;Parent=gene-YPIP275_RS02655;Dbxref=GenBank:WP_002208990.1;Name=WP_002208990.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=YPIP275_RS02655;product=50S ribosomal protein L33;protein_id=WP_002208990.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 250165 250401 . - . ID=gene-YPIP275_RS02660;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=YPIP275_RS02660;old_locus_tag=YPIP275_4955 NZ_AAOS02000002.1 Protein Homology CDS 250165 250401 . - 0 ID=cds-WP_002208991.1;Parent=gene-YPIP275_RS02660;Dbxref=GenBank:WP_002208991.1;Name=WP_002208991.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=YPIP275_RS02660;product=50S ribosomal protein L28;protein_id=WP_002208991.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 250664 251332 . - . ID=gene-YPIP275_RS02665;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=YPIP275_RS02665;old_locus_tag=YPIP275_4956 NZ_AAOS02000002.1 Protein Homology CDS 250664 251332 . - 0 ID=cds-WP_002208992.1;Parent=gene-YPIP275_RS02665;Dbxref=GenBank:WP_002208992.1;Name=WP_002208992.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208992.1;locus_tag=YPIP275_RS02665;product=RadC family protein;protein_id=WP_002208992.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 251526 252743 . + . ID=gene-YPIP275_RS02670;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=YPIP275_RS02670;old_locus_tag=YPIP275_4957 NZ_AAOS02000002.1 Protein Homology CDS 251526 252743 . + 0 ID=cds-WP_002208993.1;Parent=gene-YPIP275_RS02670;Dbxref=GenBank:WP_002208993.1;Name=WP_002208993.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005273680.1;locus_tag=YPIP275_RS02670;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_002208993.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 252721 253179 . + . ID=gene-YPIP275_RS02675;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=YPIP275_RS02675;old_locus_tag=YPIP275_4958 NZ_AAOS02000002.1 Protein Homology CDS 252721 253179 . + 0 ID=cds-WP_011566231.1;Parent=gene-YPIP275_RS02675;Dbxref=GenBank:WP_011566231.1;Name=WP_011566231.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=YPIP275_RS02675;product=dUTP diphosphatase;protein_id=WP_011566231.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 253301 253897 . + . ID=gene-YPIP275_RS02680;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02680;old_locus_tag=YPIP275_4959 NZ_AAOS02000002.1 Protein Homology CDS 253301 253897 . + 0 ID=cds-WP_002208995.1;Parent=gene-YPIP275_RS02680;Dbxref=GenBank:WP_002208995.1;Name=WP_002208995.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148925.1;locus_tag=YPIP275_RS02680;product=nucleoid occlusion factor SlmA;protein_id=WP_002208995.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 254032 254679 . - . ID=gene-YPIP275_RS02685;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=YPIP275_RS02685;old_locus_tag=YPIP275_4960 NZ_AAOS02000002.1 Protein Homology CDS 254032 254679 . - 0 ID=cds-WP_002208996.1;Parent=gene-YPIP275_RS02685;Dbxref=GenBank:WP_002208996.1;Name=WP_002208996.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208996.1;locus_tag=YPIP275_RS02685;product=orotate phosphoribosyltransferase;protein_id=WP_002208996.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 254846 255562 . - . ID=gene-YPIP275_RS02690;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=YPIP275_RS02690;old_locus_tag=YPIP275_4961 NZ_AAOS02000002.1 Protein Homology CDS 254846 255562 . - 0 ID=cds-WP_002208997.1;Parent=gene-YPIP275_RS02690;Dbxref=GenBank:WP_002208997.1;Name=WP_002208997.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208997.1;locus_tag=YPIP275_RS02690;product=ribonuclease PH;protein_id=WP_002208997.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 255689 256552 . + . ID=gene-YPIP275_RS02695;Name=YPIP275_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02695;old_locus_tag=YPIP275_4962 NZ_AAOS02000002.1 Protein Homology CDS 255689 256552 . + 0 ID=cds-WP_002208998.1;Parent=gene-YPIP275_RS02695;Dbxref=GenBank:WP_002208998.1;Name=WP_002208998.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=YPIP275_RS02695;product=YicC/YloC family endoribonuclease;protein_id=WP_002208998.1;transl_table=11 NZ_AAOS02000002.1 RefSeq pseudogene 256955 257571 . + . ID=gene-YPIP275_RS02700;Name=YPIP275_RS02700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS02700;old_locus_tag=YPIP275_4963;pseudo=true NZ_AAOS02000002.1 Protein Homology CDS 256955 257571 . + 0 ID=cds-YPIP275_RS02700;Parent=gene-YPIP275_RS02700;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165881.1;locus_tag=YPIP275_RS02700;product=trimeric intracellular cation channel family protein;pseudo=true;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 257591 259294 . - . ID=gene-YPIP275_RS02705;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=YPIP275_RS02705;old_locus_tag=YPIP275_4964 NZ_AAOS02000002.1 Protein Homology CDS 257591 259294 . - 0 ID=cds-WP_002215674.1;Parent=gene-YPIP275_RS02705;Dbxref=GenBank:WP_002215674.1;Name=WP_002215674.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002221001.1;locus_tag=YPIP275_RS02705;product=NAD-dependent DNA ligase LigB;protein_id=WP_002215674.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 259695 260318 . + . ID=gene-YPIP275_RS02710;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=YPIP275_RS02710;old_locus_tag=YPIP275_4965 NZ_AAOS02000002.1 Protein Homology CDS 259695 260318 . + 0 ID=cds-WP_002209000.1;Parent=gene-YPIP275_RS02710;Dbxref=GenBank:WP_002209000.1;Name=WP_002209000.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=YPIP275_RS02710;product=guanylate kinase;protein_id=WP_002209000.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 260373 260648 . + . ID=gene-YPIP275_RS02715;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=YPIP275_RS02715;old_locus_tag=YPIP275_4966 NZ_AAOS02000002.1 Protein Homology CDS 260373 260648 . + 0 ID=cds-WP_002209001.1;Parent=gene-YPIP275_RS02715;Dbxref=GenBank:WP_002209001.1;Name=WP_002209001.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=YPIP275_RS02715;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_002209001.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 260668 262776 . + . ID=gene-YPIP275_RS02720;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=YPIP275_RS02720;old_locus_tag=YPIP275_4967 NZ_AAOS02000002.1 Protein Homology CDS 260668 262776 . + 0 ID=cds-WP_002209002.1;Parent=gene-YPIP275_RS02720;Dbxref=GenBank:WP_002209002.1;Name=WP_002209002.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=YPIP275_RS02720;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_002209002.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 262782 263474 . + . ID=gene-YPIP275_RS02725;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=YPIP275_RS02725;old_locus_tag=YPIP275_4968 NZ_AAOS02000002.1 Protein Homology CDS 262782 263474 . + 0 ID=cds-WP_002209003.1;Parent=gene-YPIP275_RS02725;Dbxref=GenBank:WP_002209003.1;Name=WP_002209003.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O-ribose)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209003.1;locus_tag=YPIP275_RS02725;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_002209003.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 263475 265556 . + . ID=gene-YPIP275_RS02730;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=YPIP275_RS02730;old_locus_tag=YPIP275_4969 NZ_AAOS02000002.1 Protein Homology CDS 263475 265556 . + 0 ID=cds-WP_002209004.1;Parent=gene-YPIP275_RS02730;Dbxref=GenBank:WP_002209004.1;Name=WP_002209004.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209004.1;locus_tag=YPIP275_RS02730;product=ATP-dependent DNA helicase RecG;protein_id=WP_002209004.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 265748 265840 . + . ID=gene-YPIP275_RS28405;Name=YPIP275_RS28405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28405 NZ_AAOS02000002.1 Protein Homology CDS 265748 265840 . + 0 ID=cds-WP_071529784.1;Parent=gene-YPIP275_RS28405;Dbxref=GenBank:WP_071529784.1;Name=WP_071529784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430096.1;locus_tag=YPIP275_RS28405;product=gluconate 5-dehydrogenase;protein_id=WP_071529784.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 265922 267136 . - . ID=gene-YPIP275_RS02735;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=YPIP275_RS02735;old_locus_tag=YPIP275_4970 NZ_AAOS02000002.1 Protein Homology CDS 265922 267136 . - 0 ID=cds-WP_002209005.1;Parent=gene-YPIP275_RS02735;Dbxref=GenBank:WP_002209005.1;Name=WP_002209005.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304777.1;locus_tag=YPIP275_RS02735;product=sodium/glutamate symporter;protein_id=WP_002209005.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 267374 268759 . + . ID=gene-YPIP275_RS02740;Name=YPIP275_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02740;old_locus_tag=YPIP275_4971 NZ_AAOS02000002.1 Protein Homology CDS 267374 268759 . + 0 ID=cds-WP_002209006.1;Parent=gene-YPIP275_RS02740;Dbxref=GenBank:WP_002209006.1;Name=WP_002209006.1;Ontology_term=GO:0015851,GO:0015205,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014609245.1;locus_tag=YPIP275_RS02740;product=nucleobase:cation symporter-2 family protein;protein_id=WP_002209006.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 268907 270616 . + . ID=gene-YPIP275_RS02745;Name=YPIP275_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02745;old_locus_tag=YPIP275_4972 NZ_AAOS02000002.1 Protein Homology CDS 268907 270616 . + 0 ID=cds-WP_002209007.1;Parent=gene-YPIP275_RS02745;Dbxref=GenBank:WP_002209007.1;Name=WP_002209007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209007.1;locus_tag=YPIP275_RS02745;product=AsmA family protein;protein_id=WP_002209007.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 270751 271674 . - . ID=gene-YPIP275_RS02750;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=YPIP275_RS02750;old_locus_tag=YPIP275_4973 NZ_AAOS02000002.1 Protein Homology CDS 270751 271674 . - 0 ID=cds-WP_002209008.1;Parent=gene-YPIP275_RS02750;Dbxref=GenBank:WP_002209008.1;Name=WP_002209008.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209008.1;locus_tag=YPIP275_RS02750;product=fatty acid biosynthesis protein FabY;protein_id=WP_002209008.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 271944 272966 . + . ID=gene-YPIP275_RS02755;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS02755;old_locus_tag=YPIP275_4974 NZ_AAOS02000002.1 Protein Homology CDS 271944 272966 . + 0 ID=cds-WP_000255944.1-43;Parent=gene-YPIP275_RS02755;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS02755;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 272963 273745 . + . ID=gene-YPIP275_RS02760;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS02760;old_locus_tag=YPIP275_4975 NZ_AAOS02000002.1 Protein Homology CDS 272963 273745 . + 0 ID=cds-WP_001317493.1-49;Parent=gene-YPIP275_RS02760;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS02760;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 273819 274256 . - . ID=gene-YPIP275_RS02765;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=YPIP275_RS02765;old_locus_tag=YPIP275_4976 NZ_AAOS02000002.1 Protein Homology CDS 273819 274256 . - 0 ID=cds-WP_002209009.1;Parent=gene-YPIP275_RS02765;Dbxref=GenBank:WP_002209009.1;Name=WP_002209009.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147545.1;locus_tag=YPIP275_RS02765;product=D-aminoacyl-tRNA deacylase;protein_id=WP_002209009.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 274263 275147 . - . ID=gene-YPIP275_RS02770;Name=YPIP275_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS02770;old_locus_tag=YPIP275_4977 NZ_AAOS02000002.1 Protein Homology CDS 274263 275147 . - 0 ID=cds-WP_002209010.1;Parent=gene-YPIP275_RS02770;Dbxref=GenBank:WP_002209010.1;Name=WP_002209010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191445.1;locus_tag=YPIP275_RS02770;product=virulence factor BrkB family protein;protein_id=WP_002209010.1;transl_table=11 NZ_AAOS02000002.1 RefSeq gene 275244 275834 . - . ID=gene-YPIP275_RS02775;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=YPIP275_RS02775;old_locus_tag=YPIP275_4978 NZ_AAOS02000002.1 Protein Homology CDS 275244 275834 . - 0 ID=cds-WP_002209011.1;Parent=gene-YPIP275_RS02775;Dbxref=GenBank:WP_002209011.1;Name=WP_002209011.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209011.1;locus_tag=YPIP275_RS02775;product=glucose-1-phosphatase;protein_id=WP_002209011.1;transl_table=11 ##sequence-region NZ_AAOS02000001.1 1 309686 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373665 NZ_AAOS02000001.1 RefSeq region 1 309686 . + . ID=NZ_AAOS02000001.1:1..309686;Dbxref=taxon:373665;biovar=Orientalis;collection-date=1995;country=Madagascar: Ambalavao district;gbkey=Src;genome=genomic;isolation-source=16-year-old boy with bubonic plague;mol_type=genomic DNA;strain=IP275 NZ_AAOS02000001.1 RefSeq gene 1 356 . + . ID=gene-YPIP275_RS00005;Name=YPIP275_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00005;old_locus_tag=YPIP275_3449;partial=true;start_range=.,1 NZ_AAOS02000001.1 Protein Homology CDS 1 356 . + 2 ID=cds-WP_043940344.1;Parent=gene-YPIP275_RS00005;Dbxref=GenBank:WP_043940344.1;Name=WP_043940344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=YPIP275_RS00005;partial=true;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_043940344.1;start_range=.,1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 855 1112 . + . ID=gene-YPIP275_RS00010;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=YPIP275_RS00010;old_locus_tag=YPIP275_3450 NZ_AAOS02000001.1 Protein Homology CDS 855 1112 . + 0 ID=cds-WP_002208488.1;Parent=gene-YPIP275_RS00010;Dbxref=GenBank:WP_002208488.1;Name=WP_002208488.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=YPIP275_RS00010;product=phosphocarrier protein Hpr;protein_id=WP_002208488.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 1161 2888 . + . ID=gene-YPIP275_RS00015;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=YPIP275_RS00015;old_locus_tag=YPIP275_3451 NZ_AAOS02000001.1 Protein Homology CDS 1161 2888 . + 0 ID=cds-WP_002208490.1;Parent=gene-YPIP275_RS00015;Dbxref=GenBank:WP_002208490.1;Name=WP_002208490.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461367.1;locus_tag=YPIP275_RS00015;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_002208490.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 2937 3446 . + . ID=gene-YPIP275_RS00020;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=YPIP275_RS00020;old_locus_tag=YPIP275_3452 NZ_AAOS02000001.1 Protein Homology CDS 2937 3446 . + 0 ID=cds-WP_002208491.1;Parent=gene-YPIP275_RS00020;Dbxref=GenBank:WP_002208491.1;Name=WP_002208491.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=YPIP275_RS00020;product=PTS glucose transporter subunit IIA;protein_id=WP_002208491.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 3589 4047 . - . ID=gene-YPIP275_RS00025;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00025;old_locus_tag=YPIP275_3453 NZ_AAOS02000001.1 Protein Homology CDS 3589 4047 . - 0 ID=cds-WP_002213759.1-32;Parent=gene-YPIP275_RS00025;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS00025;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 4317 5666 . - . ID=gene-YPIP275_RS00035;Name=YPIP275_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00035;old_locus_tag=YPIP275_3454 NZ_AAOS02000001.1 Protein Homology CDS 4317 5666 . - 0 ID=cds-WP_002208493.1;Parent=gene-YPIP275_RS00035;Dbxref=GenBank:WP_002208493.1;Name=WP_002208493.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208493.1;locus_tag=YPIP275_RS00035;product=sensor histidine kinase;protein_id=WP_002208493.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 5692 6375 . - . ID=gene-YPIP275_RS00040;Name=YPIP275_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00040;old_locus_tag=YPIP275_3455 NZ_AAOS02000001.1 Protein Homology CDS 5692 6375 . - 0 ID=cds-WP_002208494.1;Parent=gene-YPIP275_RS00040;Dbxref=GenBank:WP_002208494.1;Name=WP_002208494.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104853.1;locus_tag=YPIP275_RS00040;product=response regulator transcription factor;protein_id=WP_002208494.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 6563 7768 . + . ID=gene-YPIP275_RS00045;Name=YPIP275_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00045;old_locus_tag=YPIP275_3456 NZ_AAOS02000001.1 Protein Homology CDS 6563 7768 . + 0 ID=cds-WP_002208495.1;Parent=gene-YPIP275_RS00045;Dbxref=GenBank:WP_002208495.1;Name=WP_002208495.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208495.1;locus_tag=YPIP275_RS00045;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_002208495.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 7772 9808 . + . ID=gene-YPIP275_RS00050;Name=YPIP275_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00050;old_locus_tag=YPIP275_3457 NZ_AAOS02000001.1 Protein Homology CDS 7772 9808 . + 0 ID=cds-WP_002208496.1;Parent=gene-YPIP275_RS00050;Dbxref=GenBank:WP_002208496.1;Name=WP_002208496.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192738.1;locus_tag=YPIP275_RS00050;product=MacB family efflux pump subunit;protein_id=WP_002208496.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 10063 11709 . - . ID=gene-YPIP275_RS00055;Name=YPIP275_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00055;old_locus_tag=YPIP275_3458 NZ_AAOS02000001.1 Protein Homology CDS 10063 11709 . - 0 ID=cds-WP_002208497.1;Parent=gene-YPIP275_RS00055;Dbxref=GenBank:WP_002208497.1;Name=WP_002208497.1;Ontology_term=GO:0045454,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303890.1;locus_tag=YPIP275_RS00055;product=CoA-disulfide reductase;protein_id=WP_002208497.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 11769 13229 . - . ID=gene-YPIP275_RS00060;Name=YPIP275_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00060;old_locus_tag=YPIP275_3459 NZ_AAOS02000001.1 Protein Homology CDS 11769 13229 . - 0 ID=cds-WP_002208498.1;Parent=gene-YPIP275_RS00060;Dbxref=GenBank:WP_002208498.1;Name=WP_002208498.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413826.1;locus_tag=YPIP275_RS00060;product=sodium:solute symporter family protein;protein_id=WP_002208498.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 13226 13423 . - . ID=gene-YPIP275_RS00065;Name=YPIP275_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00065 NZ_AAOS02000001.1 Protein Homology CDS 13226 13423 . - 0 ID=cds-WP_002215023.1;Parent=gene-YPIP275_RS00065;Dbxref=GenBank:WP_002215023.1;Name=WP_002215023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215023.1;locus_tag=YPIP275_RS00065;product=DUF3311 domain-containing protein;protein_id=WP_002215023.1;transl_table=11 NZ_AAOS02000001.1 RefSeq pseudogene 13566 14785 . - . ID=gene-YPIP275_RS00070;Name=YPIP275_RS00070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS00070;old_locus_tag=YPIP275_3460;pseudo=true NZ_AAOS02000001.1 Protein Homology CDS 13566 14785 . - 0 ID=cds-YPIP275_RS00070;Parent=gene-YPIP275_RS00070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079205.1;locus_tag=YPIP275_RS00070;product=M24 family metallopeptidase;pseudo=true;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 14819 16000 . - . ID=gene-YPIP275_RS00080;Name=YPIP275_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00080;old_locus_tag=YPIP275_3462 NZ_AAOS02000001.1 Protein Homology CDS 14819 16000 . - 0 ID=cds-WP_002208500.1;Parent=gene-YPIP275_RS00080;Dbxref=GenBank:WP_002208500.1;Name=WP_002208500.1;Ontology_term=GO:0071265,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228410.1;locus_tag=YPIP275_RS00080;product=MalY/PatB family protein;protein_id=WP_002208500.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 16708 18126 . + . ID=gene-YPIP275_RS00085;Name=YPIP275_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00085;old_locus_tag=YPIP275_3463 NZ_AAOS02000001.1 Protein Homology CDS 16708 18126 . + 0 ID=cds-WP_002208502.1;Parent=gene-YPIP275_RS00085;Dbxref=GenBank:WP_002208502.1;Name=WP_002208502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208502.1;locus_tag=YPIP275_RS00085;product=vWA domain-containing protein;protein_id=WP_002208502.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 18359 19903 . + . ID=gene-YPIP275_RS00090;Name=YPIP275_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00090;old_locus_tag=YPIP275_3464 NZ_AAOS02000001.1 Protein Homology CDS 18359 19903 . + 0 ID=cds-WP_002208505.1;Parent=gene-YPIP275_RS00090;Dbxref=GenBank:WP_002208505.1;Name=WP_002208505.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906317.1;locus_tag=YPIP275_RS00090;product=sensor histidine kinase;protein_id=WP_002208505.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 19900 20607 . + . ID=gene-YPIP275_RS00095;Name=YPIP275_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00095;old_locus_tag=YPIP275_3465 NZ_AAOS02000001.1 Protein Homology CDS 19900 20607 . + 0 ID=cds-WP_002208506.1;Parent=gene-YPIP275_RS00095;Dbxref=GenBank:WP_002208506.1;Name=WP_002208506.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224818.1;locus_tag=YPIP275_RS00095;product=response regulator transcription factor;protein_id=WP_002208506.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 20988 22220 . - . ID=gene-YPIP275_RS00100;Name=YPIP275_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00100;old_locus_tag=YPIP275_3466 NZ_AAOS02000001.1 Protein Homology CDS 20988 22220 . - 0 ID=cds-WP_002208507.1;Parent=gene-YPIP275_RS00100;Dbxref=GenBank:WP_002208507.1;Name=WP_002208507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208507.1;locus_tag=YPIP275_RS00100;product=EspK/GogB family type III secretion system effector;protein_id=WP_002208507.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 22465 23343 . - . ID=gene-YPIP275_RS00105;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=YPIP275_RS00105;old_locus_tag=YPIP275_3467 NZ_AAOS02000001.1 Protein Homology CDS 22465 23343 . - 0 ID=cds-WP_002208508.1;Parent=gene-YPIP275_RS00105;Dbxref=GenBank:WP_002208508.1;Name=WP_002208508.1;Ontology_term=GO:0019344,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208508.1;locus_tag=YPIP275_RS00105;product=cysteine synthase CysM;protein_id=WP_002208508.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 23514 24605 . - . ID=gene-YPIP275_RS00110;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00110;old_locus_tag=YPIP275_3468 NZ_AAOS02000001.1 Protein Homology CDS 23514 24605 . - 0 ID=cds-WP_002208509.1;Parent=gene-YPIP275_RS00110;Dbxref=GenBank:WP_002208509.1;Name=WP_002208509.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081738.1;locus_tag=YPIP275_RS00110;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_002208509.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 24595 25470 . - . ID=gene-YPIP275_RS00115;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=YPIP275_RS00115;old_locus_tag=YPIP275_3469 NZ_AAOS02000001.1 Protein Homology CDS 24595 25470 . - 0 ID=cds-WP_002208510.1;Parent=gene-YPIP275_RS00115;Dbxref=GenBank:WP_002208510.1;Name=WP_002208510.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231045.1;locus_tag=YPIP275_RS00115;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_002208510.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 25470 26303 . - . ID=gene-YPIP275_RS00120;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=YPIP275_RS00120;old_locus_tag=YPIP275_3470 NZ_AAOS02000001.1 Protein Homology CDS 25470 26303 . - 0 ID=cds-WP_002208511.1;Parent=gene-YPIP275_RS00120;Dbxref=GenBank:WP_002208511.1;Name=WP_002208511.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228140.1;locus_tag=YPIP275_RS00120;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_002208511.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 26303 27340 . - . ID=gene-YPIP275_RS00125;Name=YPIP275_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00125;old_locus_tag=YPIP275_3471 NZ_AAOS02000001.1 Protein Homology CDS 26303 27340 . - 0 ID=cds-WP_002208512.1;Parent=gene-YPIP275_RS00125;Dbxref=GenBank:WP_002208512.1;Name=WP_002208512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707715.1;locus_tag=YPIP275_RS00125;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_002208512.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 27655 29187 . - . ID=gene-YPIP275_RS00130;Name=YPIP275_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00130;old_locus_tag=YPIP275_3472 NZ_AAOS02000001.1 Protein Homology CDS 27655 29187 . - 0 ID=cds-WP_002208513.1;Parent=gene-YPIP275_RS00130;Dbxref=GenBank:WP_002208513.1;Name=WP_002208513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906318.1;locus_tag=YPIP275_RS00130;product=MFS transporter;protein_id=WP_002208513.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 29792 30613 . - . ID=gene-YPIP275_RS00135;Name=YPIP275_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00135;old_locus_tag=YPIP275_3473 NZ_AAOS02000001.1 Protein Homology CDS 29792 30613 . - 0 ID=cds-WP_238382996.1;Parent=gene-YPIP275_RS00135;Dbxref=GenBank:WP_238382996.1;Name=WP_238382996.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392552.1;locus_tag=YPIP275_RS00135;product=MurR/RpiR family transcriptional regulator;protein_id=WP_238382996.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 30859 31329 . - . ID=gene-YPIP275_RS00145;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS00145;old_locus_tag=YPIP275_3474 NZ_AAOS02000001.1 Protein Homology CDS 30859 31329 . - 0 ID=cds-WP_002208515.1;Parent=gene-YPIP275_RS00145;Dbxref=GenBank:WP_002208515.1;Name=WP_002208515.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192748.1;locus_tag=YPIP275_RS00145;product=N-acetylneuraminate anomerase;protein_id=WP_002208515.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 31411 32283 . - . ID=gene-YPIP275_RS00150;Name=YPIP275_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00150;old_locus_tag=YPIP275_3475 NZ_AAOS02000001.1 Protein Homology CDS 31411 32283 . - 0 ID=cds-WP_002208516.1;Parent=gene-YPIP275_RS00150;Dbxref=GenBank:WP_002208516.1;Name=WP_002208516.1;Ontology_term=GO:0006051,GO:0005524,GO:0008270,GO:0009384;gbkey=CDS;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylmannosamine metabolic process|0006051||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683572.1;locus_tag=YPIP275_RS00150;product=N-acetylmannosamine kinase;protein_id=WP_002208516.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 32552 33118 . + . ID=gene-YPIP275_RS28370;Name=YPIP275_RS28370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28370 NZ_AAOS02000001.1 Protein Homology CDS 32552 33118 . + 0 ID=cds-WP_002229547.1;Parent=gene-YPIP275_RS28370;Dbxref=GenBank:WP_002229547.1;Name=WP_002229547.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025224.7;locus_tag=YPIP275_RS28370;product=leucine-rich repeat domain-containing protein;protein_id=WP_002229547.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 33171 33680 . + . ID=gene-YPIP275_RS28375;Name=YPIP275_RS28375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS28375 NZ_AAOS02000001.1 Protein Homology CDS 33171 33680 . + 0 ID=cds-WP_002229548.1;Parent=gene-YPIP275_RS28375;Dbxref=GenBank:WP_002229548.1;Name=WP_002229548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002229548.1;locus_tag=YPIP275_RS28375;product=hypothetical protein;protein_id=WP_002229548.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 33841 34587 . + . ID=gene-YPIP275_RS00160;Name=YPIP275_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00160;old_locus_tag=YPIP275_3477 NZ_AAOS02000001.1 Protein Homology CDS 33841 34587 . + 0 ID=cds-WP_016255872.1;Parent=gene-YPIP275_RS00160;Dbxref=GenBank:WP_016255872.1;Name=WP_016255872.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016255872.1;locus_tag=YPIP275_RS00160;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_016255872.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 34650 35543 . + . ID=gene-YPIP275_RS00165;Name=YPIP275_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00165;old_locus_tag=YPIP275_3478 NZ_AAOS02000001.1 Protein Homology CDS 34650 35543 . + 0 ID=cds-WP_002208518.1;Parent=gene-YPIP275_RS00165;Dbxref=GenBank:WP_002208518.1;Name=WP_002208518.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208518.1;locus_tag=YPIP275_RS00165;product=dihydrodipicolinate synthase family protein;protein_id=WP_002208518.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 35641 36540 . - . ID=gene-YPIP275_RS00170;Name=YPIP275_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00170;old_locus_tag=YPIP275_3479 NZ_AAOS02000001.1 Protein Homology CDS 35641 36540 . - 0 ID=cds-WP_002208519.1;Parent=gene-YPIP275_RS00170;Dbxref=GenBank:WP_002208519.1;Name=WP_002208519.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229799.1;locus_tag=YPIP275_RS00170;product=Dyp-type peroxidase;protein_id=WP_002208519.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 36718 37329 . - . ID=gene-YPIP275_RS00175;Name=YPIP275_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00175;old_locus_tag=YPIP275_3481 NZ_AAOS02000001.1 Protein Homology CDS 36718 37329 . - 0 ID=cds-WP_002208521.1;Parent=gene-YPIP275_RS00175;Dbxref=GenBank:WP_002208521.1;Name=WP_002208521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208521.1;locus_tag=YPIP275_RS00175;product=RpoE-regulated lipoprotein;protein_id=WP_002208521.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 37688 38101 . + . ID=gene-YPIP275_RS00180;Name=YPIP275_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00180;old_locus_tag=YPIP275_3482 NZ_AAOS02000001.1 Protein Homology CDS 37688 38101 . + 0 ID=cds-WP_002208522.1;Parent=gene-YPIP275_RS00180;Dbxref=GenBank:WP_002208522.1;Name=WP_002208522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083666.1;locus_tag=YPIP275_RS00180;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_002208522.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 38588 40867 . + . ID=gene-YPIP275_RS00185;Name=yapL;gbkey=Gene;gene=yapL;gene_biotype=protein_coding;locus_tag=YPIP275_RS00185;old_locus_tag=YPIP275_3483 NZ_AAOS02000001.1 Protein Homology CDS 38588 40867 . + 0 ID=cds-WP_002208523.1;Parent=gene-YPIP275_RS00185;Dbxref=GenBank:WP_002208523.1;Name=WP_002208523.1;gbkey=CDS;gene=yapL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208523.1;locus_tag=YPIP275_RS00185;product=autotransporter YapL;protein_id=WP_002208523.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 40959 41375 . - . ID=gene-YPIP275_RS00190;Name=YPIP275_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00190;old_locus_tag=YPIP275_3484 NZ_AAOS02000001.1 Protein Homology CDS 40959 41375 . - 0 ID=cds-WP_002208524.1;Parent=gene-YPIP275_RS00190;Dbxref=GenBank:WP_002208524.1;Name=WP_002208524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192753.1;locus_tag=YPIP275_RS00190;product=hypothetical protein;protein_id=WP_002208524.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 41848 42273 . - . ID=gene-YPIP275_RS00200;Name=YPIP275_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00200;old_locus_tag=YPIP275_3485 NZ_AAOS02000001.1 Protein Homology CDS 41848 42273 . - 0 ID=cds-WP_002208525.1;Parent=gene-YPIP275_RS00200;Dbxref=GenBank:WP_002208525.1;Name=WP_002208525.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228147.1;locus_tag=YPIP275_RS00200;product=GNAT family acetyltransferase;protein_id=WP_002208525.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 42556 43485 . + . ID=gene-YPIP275_RS00205;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=YPIP275_RS00205;old_locus_tag=YPIP275_3486 NZ_AAOS02000001.1 Protein Homology CDS 42556 43485 . + 0 ID=cds-WP_002208526.1;Parent=gene-YPIP275_RS00205;Dbxref=GenBank:WP_002208526.1;Name=WP_002208526.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104841.1;locus_tag=YPIP275_RS00205;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_002208526.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 43485 43943 . + . ID=gene-YPIP275_RS00210;Name=YPIP275_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00210;old_locus_tag=YPIP275_3487 NZ_AAOS02000001.1 Protein Homology CDS 43485 43943 . + 0 ID=cds-WP_002208527.1;Parent=gene-YPIP275_RS00210;Dbxref=GenBank:WP_002208527.1;Name=WP_002208527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208527.1;locus_tag=YPIP275_RS00210;product=YaiI/YqxD family protein;protein_id=WP_002208527.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 44094 46379 . - . ID=gene-YPIP275_RS00215;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=YPIP275_RS00215;old_locus_tag=YPIP275_3488 NZ_AAOS02000001.1 Protein Homology CDS 44094 46379 . - 0 ID=cds-WP_002208528.1;Parent=gene-YPIP275_RS00215;Dbxref=GenBank:WP_002208528.1;Name=WP_002208528.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229805.1;locus_tag=YPIP275_RS00215;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_002208528.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 46575 47171 . - . ID=gene-YPIP275_RS00220;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=YPIP275_RS00220;old_locus_tag=YPIP275_3489 NZ_AAOS02000001.1 Protein Homology CDS 46575 47171 . - 0 ID=cds-WP_002208529.1;Parent=gene-YPIP275_RS00220;Dbxref=GenBank:WP_002208529.1;Name=WP_002208529.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208529.1;locus_tag=YPIP275_RS00220;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_002208529.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 47355 47957 . - . ID=gene-YPIP275_RS00225;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=YPIP275_RS00225;old_locus_tag=YPIP275_3491 NZ_AAOS02000001.1 Protein Homology CDS 47355 47957 . - 0 ID=cds-WP_002208531.1;Parent=gene-YPIP275_RS00225;Dbxref=GenBank:WP_002208531.1;Name=WP_002208531.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208531.1;locus_tag=YPIP275_RS00225;product=cytochrome c-type protein NapC;protein_id=WP_002208531.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 47982 48437 . - . ID=gene-YPIP275_RS00230;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=YPIP275_RS00230;old_locus_tag=YPIP275_3492 NZ_AAOS02000001.1 Protein Homology CDS 47982 48437 . - 0 ID=cds-WP_002214527.1;Parent=gene-YPIP275_RS00230;Dbxref=GenBank:WP_002214527.1;Name=WP_002214527.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214527.1;locus_tag=YPIP275_RS00230;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_002214527.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 48532 51024 . - . ID=gene-YPIP275_RS00235;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00235;old_locus_tag=YPIP275_3494 NZ_AAOS02000001.1 Protein Homology CDS 48532 51024 . - 0 ID=cds-WP_002208534.1;Parent=gene-YPIP275_RS00235;Dbxref=GenBank:WP_002208534.1;Name=WP_002208534.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016674026.1;locus_tag=YPIP275_RS00235;product=nitrate reductase catalytic subunit NapA;protein_id=WP_002208534.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 51021 51287 . - . ID=gene-YPIP275_RS00240;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=YPIP275_RS00240;old_locus_tag=YPIP275_3495 NZ_AAOS02000001.1 Protein Homology CDS 51021 51287 . - 0 ID=cds-WP_002208535.1;Parent=gene-YPIP275_RS00240;Dbxref=GenBank:WP_002208535.1;Name=WP_002208535.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906320.1;locus_tag=YPIP275_RS00240;product=chaperone NapD;protein_id=WP_002208535.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 51277 51780 . - . ID=gene-YPIP275_RS00245;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=YPIP275_RS00245;old_locus_tag=YPIP275_3496 NZ_AAOS02000001.1 Protein Homology CDS 51277 51780 . - 0 ID=cds-WP_002208536.1;Parent=gene-YPIP275_RS00245;Dbxref=GenBank:WP_002208536.1;Name=WP_002208536.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208536.1;locus_tag=YPIP275_RS00245;product=ferredoxin-type protein NapF;protein_id=WP_002208536.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 52613 53242 . + . ID=gene-YPIP275_RS00250;Name=YPIP275_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00250;old_locus_tag=YPIP275_3497 NZ_AAOS02000001.1 Protein Homology CDS 52613 53242 . + 0 ID=cds-WP_002208537.1;Parent=gene-YPIP275_RS00250;Dbxref=GenBank:WP_002208537.1;Name=WP_002208537.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004878032.1;locus_tag=YPIP275_RS00250;product=response regulator;protein_id=WP_002208537.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 53255 53533 . - . ID=gene-YPIP275_RS00255;Name=YPIP275_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00255;old_locus_tag=YPIP275_3498 NZ_AAOS02000001.1 Protein Homology CDS 53255 53533 . - 0 ID=cds-WP_002208538.1;Parent=gene-YPIP275_RS00255;Dbxref=GenBank:WP_002208538.1;Name=WP_002208538.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208538.1;locus_tag=YPIP275_RS00255;product=winged helix-turn-helix domain-containing protein;protein_id=WP_002208538.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 53948 57079 . + . ID=gene-YPIP275_RS00260;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=YPIP275_RS00260;old_locus_tag=YPIP275_3499 NZ_AAOS02000001.1 Protein Homology CDS 53948 57079 . + 0 ID=cds-WP_002208539.1;Parent=gene-YPIP275_RS00260;Dbxref=GenBank:WP_002208539.1;Name=WP_002208539.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208539.1;locus_tag=YPIP275_RS00260;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_002208539.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 57310 57894 . + . ID=gene-YPIP275_RS00265;Name=YPIP275_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00265;old_locus_tag=YPIP275_3500 NZ_AAOS02000001.1 Protein Homology CDS 57310 57894 . + 0 ID=cds-WP_002208540.1;Parent=gene-YPIP275_RS00265;Dbxref=GenBank:WP_002208540.1;Name=WP_002208540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208540.1;locus_tag=YPIP275_RS00265;product=hypothetical protein;protein_id=WP_002208540.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 58183 58731 . + . ID=gene-YPIP275_RS00270;Name=YPIP275_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00270;old_locus_tag=YPIP275_3501 NZ_AAOS02000001.1 Protein Homology CDS 58183 58731 . + 0 ID=cds-WP_002208541.1;Parent=gene-YPIP275_RS00270;Dbxref=GenBank:WP_002208541.1;Name=WP_002208541.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208541.1;locus_tag=YPIP275_RS00270;product=metal-dependent hydrolase;protein_id=WP_002208541.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 59007 59075 . - . ID=gene-YPIP275_RS29335;Name=YPIP275_RS29335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS29335 NZ_AAOS02000001.1 Protein Homology CDS 59007 59075 . - 0 ID=cds-WP_488646125.1;Parent=gene-YPIP275_RS29335;Dbxref=GenBank:WP_488646125.1;Name=WP_488646125.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF055426.1;locus_tag=YPIP275_RS29335;product=hypothetical protein;protein_id=WP_488646125.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 59485 60660 . - . ID=gene-YPIP275_RS00275;Name=YPIP275_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00275;old_locus_tag=YPIP275_3502 NZ_AAOS02000001.1 Protein Homology CDS 59485 60660 . - 0 ID=cds-WP_002208542.1;Parent=gene-YPIP275_RS00275;Dbxref=GenBank:WP_002208542.1;Name=WP_002208542.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208542.1;locus_tag=YPIP275_RS00275;product=anaerobic sulfatase maturase;protein_id=WP_002208542.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 60718 62388 . - . ID=gene-YPIP275_RS00280;Name=YPIP275_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00280;old_locus_tag=YPIP275_3503 NZ_AAOS02000001.1 Protein Homology CDS 60718 62388 . - 0 ID=cds-WP_002378486.1;Parent=gene-YPIP275_RS00280;Dbxref=GenBank:WP_002378486.1;Name=WP_002378486.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378486.1;locus_tag=YPIP275_RS00280;product=sulfatase-like hydrolase/transferase;protein_id=WP_002378486.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 62649 62855 . - . ID=gene-YPIP275_RS26575;Name=YPIP275_RS26575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26575 NZ_AAOS02000001.1 Protein Homology CDS 62649 62855 . - 0 ID=cds-WP_002214539.1;Parent=gene-YPIP275_RS26575;Dbxref=GenBank:WP_002214539.1;Name=WP_002214539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214539.1;locus_tag=YPIP275_RS26575;product=hypothetical protein;protein_id=WP_002214539.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 62869 63939 . - . ID=gene-YPIP275_RS00285;Name=YPIP275_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00285;old_locus_tag=YPIP275_3504 NZ_AAOS02000001.1 Protein Homology CDS 62869 63939 . - 0 ID=cds-WP_002208544.1;Parent=gene-YPIP275_RS00285;Dbxref=GenBank:WP_002208544.1;Name=WP_002208544.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229891.1;locus_tag=YPIP275_RS00285;product=ABC transporter ATP-binding protein;protein_id=WP_002208544.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 63932 65701 . - . ID=gene-YPIP275_RS00290;Name=YPIP275_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00290;old_locus_tag=YPIP275_3505 NZ_AAOS02000001.1 Protein Homology CDS 63932 65701 . - 0 ID=cds-WP_002208545.1;Parent=gene-YPIP275_RS00290;Dbxref=GenBank:WP_002208545.1;Name=WP_002208545.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002231049.1;locus_tag=YPIP275_RS00290;product=ABC transporter permease;protein_id=WP_002208545.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 65796 66884 . - . ID=gene-YPIP275_RS00295;Name=YPIP275_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00295;old_locus_tag=YPIP275_3506 NZ_AAOS02000001.1 Protein Homology CDS 65796 66884 . - 0 ID=cds-WP_002208546.1;Parent=gene-YPIP275_RS00295;Dbxref=GenBank:WP_002208546.1;Name=WP_002208546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208546.1;locus_tag=YPIP275_RS00295;product=ABC transporter substrate-binding protein;protein_id=WP_002208546.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 67195 67668 . + . ID=gene-YPIP275_RS00300;Name=YPIP275_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00300;old_locus_tag=YPIP275_3507 NZ_AAOS02000001.1 Protein Homology CDS 67195 67668 . + 0 ID=cds-WP_002208547.1;Parent=gene-YPIP275_RS00300;Dbxref=GenBank:WP_002208547.1;Name=WP_002208547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208547.1;locus_tag=YPIP275_RS00300;product=tetratricopeptide repeat protein;protein_id=WP_002208547.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 67828 68226 . + . ID=gene-YPIP275_RS00305;Name=YPIP275_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00305;old_locus_tag=YPIP275_3508 NZ_AAOS02000001.1 Protein Homology CDS 67828 68226 . + 0 ID=cds-WP_002208548.1;Parent=gene-YPIP275_RS00305;Dbxref=GenBank:WP_002208548.1;Name=WP_002208548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208548.1;locus_tag=YPIP275_RS00305;product=ArsC family reductase;protein_id=WP_002208548.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 68228 69355 . + . ID=gene-YPIP275_RS00310;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=YPIP275_RS00310;old_locus_tag=YPIP275_3509 NZ_AAOS02000001.1 Protein Homology CDS 68228 69355 . + 0 ID=cds-WP_002208549.1;Parent=gene-YPIP275_RS00310;Dbxref=GenBank:WP_002208549.1;Name=WP_002208549.1;Ontology_term=GO:0009085,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083676.1;locus_tag=YPIP275_RS00310;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_002208549.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 69352 70029 . + . ID=gene-YPIP275_RS00315;Name=YPIP275_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00315;old_locus_tag=YPIP275_3510 NZ_AAOS02000001.1 Protein Homology CDS 69352 70029 . + 0 ID=cds-WP_002208550.1;Parent=gene-YPIP275_RS00315;Dbxref=GenBank:WP_002208550.1;Name=WP_002208550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208550.1;locus_tag=YPIP275_RS00315;product=M15 family metallopeptidase;protein_id=WP_002208550.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 70097 70291 . + . ID=gene-YPIP275_RS00320;Name=YPIP275_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00320;old_locus_tag=YPIP275_3511 NZ_AAOS02000001.1 Protein Homology CDS 70097 70291 . + 0 ID=cds-WP_002208551.1;Parent=gene-YPIP275_RS00320;Dbxref=GenBank:WP_002208551.1;Name=WP_002208551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004876838.1;locus_tag=YPIP275_RS00320;product=YpfN family protein;protein_id=WP_002208551.1;transl_table=11 NZ_AAOS02000001.1 RefSeq pseudogene 70426 70542 . - . ID=gene-YPIP275_RS28380;Name=YPIP275_RS28380;end_range=70542,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS28380;partial=true;pseudo=true;start_range=.,70426 NZ_AAOS02000001.1 Protein Homology CDS 70426 70542 . - 0 ID=cds-YPIP275_RS28380;Parent=gene-YPIP275_RS28380;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=70542,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525782.1;locus_tag=YPIP275_RS28380;partial=true;product=sugar kinase;pseudo=true;start_range=.,70426;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 70496 72595 . - . ID=gene-YPIP275_RS00325;Name=YPIP275_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00325;old_locus_tag=YPIP275_3512 NZ_AAOS02000001.1 Protein Homology CDS 70496 72595 . - 0 ID=cds-WP_002208552.1;Parent=gene-YPIP275_RS00325;Dbxref=GenBank:WP_002208552.1;Name=WP_002208552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208552.1;locus_tag=YPIP275_RS00325;product=tRNA(Met) cytidine acetyltransferase TmcA;protein_id=WP_002208552.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 72597 73049 . - . ID=gene-YPIP275_RS00330;Name=YPIP275_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00330;old_locus_tag=YPIP275_3513 NZ_AAOS02000001.1 Protein Homology CDS 72597 73049 . - 0 ID=cds-WP_002208553.1;Parent=gene-YPIP275_RS00330;Dbxref=GenBank:WP_002208553.1;Name=WP_002208553.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208553.1;locus_tag=YPIP275_RS00330;product=DUF441 domain-containing protein;protein_id=WP_002208553.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 73143 74009 . - . ID=gene-YPIP275_RS00335;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=YPIP275_RS00335;old_locus_tag=YPIP275_3514 NZ_AAOS02000001.1 Protein Homology CDS 73143 74009 . - 0 ID=cds-WP_002208554.1;Parent=gene-YPIP275_RS00335;Dbxref=GenBank:WP_002208554.1;Name=WP_002208554.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208554.1;locus_tag=YPIP275_RS00335;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_002208554.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 74228 74941 . - . ID=gene-YPIP275_RS00340;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=YPIP275_RS00340;old_locus_tag=YPIP275_3515 NZ_AAOS02000001.1 Protein Homology CDS 74228 74941 . - 0 ID=cds-WP_002208555.1;Parent=gene-YPIP275_RS00340;Dbxref=GenBank:WP_002208555.1;Name=WP_002208555.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=YPIP275_RS00340;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_002208555.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 75089 75547 . - . ID=gene-YPIP275_RS00345;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00345;old_locus_tag=YPIP275_3516 NZ_AAOS02000001.1 Protein Homology CDS 75089 75547 . - 0 ID=cds-WP_002213775.1-39;Parent=gene-YPIP275_RS00345;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS00345;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 75722 76780 . - . ID=gene-YPIP275_RS00355;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=YPIP275_RS00355;old_locus_tag=YPIP275_3517 NZ_AAOS02000001.1 Protein Homology CDS 75722 76780 . - 0 ID=cds-WP_002208557.1;Parent=gene-YPIP275_RS00355;Dbxref=GenBank:WP_002208557.1;Name=WP_002208557.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303873.1;locus_tag=YPIP275_RS00355;product=outer membrane protein assembly factor BamC;protein_id=WP_002208557.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 76798 77679 . - . ID=gene-YPIP275_RS00360;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00360;old_locus_tag=YPIP275_3518 NZ_AAOS02000001.1 Protein Homology CDS 76798 77679 . - 0 ID=cds-WP_002227834.1;Parent=gene-YPIP275_RS00360;Dbxref=GenBank:WP_002227834.1;Name=WP_002227834.1;Ontology_term=GO:0009085,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032466692.1;locus_tag=YPIP275_RS00360;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_002227834.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 77844 78413 . + . ID=gene-YPIP275_RS00365;Name=YPIP275_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00365;old_locus_tag=YPIP275_3519 NZ_AAOS02000001.1 Protein Homology CDS 77844 78413 . + 0 ID=cds-WP_002227068.1;Parent=gene-YPIP275_RS00365;Dbxref=GenBank:WP_002227068.1;Name=WP_002227068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227068.1;locus_tag=YPIP275_RS00365;product=glycine cleavage system transcriptional repressor;protein_id=WP_002227068.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 78416 78886 . + . ID=gene-YPIP275_RS00370;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=YPIP275_RS00370;old_locus_tag=YPIP275_3520 NZ_AAOS02000001.1 Protein Homology CDS 78416 78886 . + 0 ID=cds-WP_002208560.1;Parent=gene-YPIP275_RS00370;Dbxref=GenBank:WP_002208560.1;Name=WP_002208560.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311369.1;locus_tag=YPIP275_RS00370;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_002208560.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 79130 79549 . - . ID=gene-YPIP275_RS00375;Name=YPIP275_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00375 NZ_AAOS02000001.1 Protein Homology CDS 79130 79549 . - 0 ID=cds-WP_002217563.1;Parent=gene-YPIP275_RS00375;Dbxref=GenBank:WP_002217563.1;Name=WP_002217563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217563.1;locus_tag=YPIP275_RS00375;product=hypothetical protein;protein_id=WP_002217563.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 79553 80248 . - . ID=gene-YPIP275_RS00380;Name=YPIP275_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00380;old_locus_tag=YPIP275_3521 NZ_AAOS02000001.1 Protein Homology CDS 79553 80248 . - 0 ID=cds-WP_002208561.1;Parent=gene-YPIP275_RS00380;Dbxref=GenBank:WP_002208561.1;Name=WP_002208561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208561.1;locus_tag=YPIP275_RS00380;product=hypothetical protein;protein_id=WP_002208561.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 80848 81912 . - . ID=gene-YPIP275_RS00390;Name=YPIP275_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00390;old_locus_tag=YPIP275_3523 NZ_AAOS02000001.1 Protein Homology CDS 80848 81912 . - 0 ID=cds-WP_002208563.1;Parent=gene-YPIP275_RS00390;Dbxref=GenBank:WP_002208563.1;Name=WP_002208563.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005172372.1;locus_tag=YPIP275_RS00390;product=AI-2E family transporter;protein_id=WP_002208563.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 82243 83727 . + . ID=gene-YPIP275_RS00395;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00395;old_locus_tag=YPIP275_3524 NZ_AAOS02000001.1 Protein Homology CDS 82243 83727 . + 0 ID=cds-WP_002217569.1;Parent=gene-YPIP275_RS00395;Dbxref=GenBank:WP_002217569.1;Name=WP_002217569.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192768.1;locus_tag=YPIP275_RS00395;product=beta-barrel assembly-enhancing protease;protein_id=WP_002217569.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 83834 84190 . + . ID=gene-YPIP275_RS00400;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=YPIP275_RS00400;old_locus_tag=YPIP275_3525 NZ_AAOS02000001.1 Protein Homology CDS 83834 84190 . + 0 ID=cds-WP_002208565.1;Parent=gene-YPIP275_RS00400;Dbxref=GenBank:WP_002208565.1;Name=WP_002208565.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391285.1;locus_tag=YPIP275_RS00400;product=arsenate reductase (glutaredoxin);protein_id=WP_002208565.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 84402 85109 . - . ID=gene-YPIP275_RS00405;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=YPIP275_RS00405;old_locus_tag=YPIP275_3526 NZ_AAOS02000001.1 Protein Homology CDS 84402 85109 . - 0 ID=cds-WP_002228401.1;Parent=gene-YPIP275_RS00405;Dbxref=GenBank:WP_002228401.1;Name=WP_002228401.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228401.1;locus_tag=YPIP275_RS00405;product=DnaA inactivator Hda;protein_id=WP_002228401.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 85297 85755 . - . ID=gene-YPIP275_RS00410;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00410;old_locus_tag=YPIP275_3527 NZ_AAOS02000001.1 Protein Homology CDS 85297 85755 . - 0 ID=cds-WP_002213775.1-40;Parent=gene-YPIP275_RS00410;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS00410;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000001.1 RefSeq pseudogene 86102 87486 . - . ID=gene-YPIP275_RS00420;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=pseudogene;locus_tag=YPIP275_RS00420;old_locus_tag=YPIP275_3528;pseudo=true NZ_AAOS02000001.1 Protein Homology CDS 86102 87486 . - 0 ID=cds-YPIP275_RS00420;Parent=gene-YPIP275_RS00420;Note=frameshifted;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=YPIP275_RS00420;product=cysteine--tRNA ligase;pseudo=true;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 87697 88191 . + . ID=gene-YPIP275_RS00425;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=YPIP275_RS00425;old_locus_tag=YPIP275_3529 NZ_AAOS02000001.1 Protein Homology CDS 87697 88191 . + 0 ID=cds-WP_002208567.1;Parent=gene-YPIP275_RS00425;Dbxref=GenBank:WP_002208567.1;Name=WP_002208567.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415058.1;locus_tag=YPIP275_RS00425;product=peptidylprolyl isomerase B;protein_id=WP_002208567.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 88202 88924 . + . ID=gene-YPIP275_RS00430;Name=YPIP275_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00430;old_locus_tag=YPIP275_3530 NZ_AAOS02000001.1 Protein Homology CDS 88202 88924 . + 0 ID=cds-WP_002208568.1;Parent=gene-YPIP275_RS00430;Dbxref=GenBank:WP_002208568.1;Name=WP_002208568.1;Ontology_term=GO:0009245,GO:0016462;gbkey=CDS;go_function=pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167787.1;locus_tag=YPIP275_RS00430;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_002208568.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 89220 89744 . + . ID=gene-YPIP275_RS00435;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=YPIP275_RS00435;old_locus_tag=YPIP275_3531 NZ_AAOS02000001.1 Protein Homology CDS 89220 89744 . + 0 ID=cds-WP_002208569.1;Parent=gene-YPIP275_RS00435;Dbxref=GenBank:WP_002208569.1;Name=WP_002208569.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208569.1;locus_tag=YPIP275_RS00435;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_002208569.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 89741 90805 . + . ID=gene-YPIP275_RS00440;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=YPIP275_RS00440;old_locus_tag=YPIP275_3532 NZ_AAOS02000001.1 Protein Homology CDS 89741 90805 . + 0 ID=cds-WP_002208570.1;Parent=gene-YPIP275_RS00440;Dbxref=GenBank:WP_002208570.1;Name=WP_002208570.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158266.1;locus_tag=YPIP275_RS00440;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_002208570.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 90849 93278 . - . ID=gene-YPIP275_RS00445;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=YPIP275_RS00445;old_locus_tag=YPIP275_3533 NZ_AAOS02000001.1 Protein Homology CDS 90849 93278 . - 0 ID=cds-WP_002208571.1;Parent=gene-YPIP275_RS00445;Dbxref=GenBank:WP_002208571.1;Name=WP_002208571.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304482.1;locus_tag=YPIP275_RS00445;product=putative ABC transporter permease subunit YbbP;protein_id=WP_002208571.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 93275 93961 . - . ID=gene-YPIP275_RS00450;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00450;old_locus_tag=YPIP275_3534 NZ_AAOS02000001.1 Protein Homology CDS 93275 93961 . - 0 ID=cds-WP_002208572.1;Parent=gene-YPIP275_RS00450;Dbxref=GenBank:WP_002208572.1;Name=WP_002208572.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013508191.1;locus_tag=YPIP275_RS00450;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_002208572.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 93932 94567 . + . ID=gene-YPIP275_RS00455;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00455;old_locus_tag=YPIP275_3535 NZ_AAOS02000001.1 Protein Homology CDS 93932 94567 . + 0 ID=cds-WP_002208573.1;Parent=gene-YPIP275_RS00455;Dbxref=GenBank:WP_002208573.1;Name=WP_002208573.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014462442.1;locus_tag=YPIP275_RS00455;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_002208573.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 94954 95730 . + . ID=gene-YPIP275_RS00460;Name=YPIP275_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00460;old_locus_tag=YPIP275_3536 NZ_AAOS02000001.1 Protein Homology CDS 94954 95730 . + 0 ID=cds-WP_002208574.1;Parent=gene-YPIP275_RS00460;Dbxref=GenBank:WP_002208574.1;Name=WP_002208574.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081255.1;locus_tag=YPIP275_RS00460;product=SDR family oxidoreductase;protein_id=WP_002208574.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 95807 96676 . + . ID=gene-YPIP275_RS00465;Name=YPIP275_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00465;old_locus_tag=YPIP275_3537 NZ_AAOS02000001.1 Protein Homology CDS 95807 96676 . + 0 ID=cds-WP_002208575.1;Parent=gene-YPIP275_RS00465;Dbxref=GenBank:WP_002208575.1;Name=WP_002208575.1;Ontology_term=GO:0006457,GO:0034599,GO:0005515,GO:0051082;gbkey=CDS;go_function=protein binding|0005515||IEA,obsolete unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,cellular response to oxidative stress|0034599||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208575.1;locus_tag=YPIP275_RS00465;product=co-chaperone YbbN;protein_id=WP_002208575.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 96871 97785 . + . ID=gene-YPIP275_RS00470;Name=YPIP275_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00470;old_locus_tag=YPIP275_3538 NZ_AAOS02000001.1 Protein Homology CDS 96871 97785 . + 0 ID=cds-WP_002208576.1;Parent=gene-YPIP275_RS00470;Dbxref=GenBank:WP_002208576.1;Name=WP_002208576.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004714639.1;locus_tag=YPIP275_RS00470;product=SPFH domain-containing protein;protein_id=WP_002208576.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 97788 98237 . + . ID=gene-YPIP275_RS00475;Name=YPIP275_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00475;old_locus_tag=YPIP275_3539 NZ_AAOS02000001.1 Protein Homology CDS 97788 98237 . + 0 ID=cds-WP_002208577.1;Parent=gene-YPIP275_RS00475;Dbxref=GenBank:WP_002208577.1;Name=WP_002208577.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208577.1;locus_tag=YPIP275_RS00475;product=NfeD family protein;protein_id=WP_002208577.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 98346 98765 . - . ID=gene-YPIP275_RS00480;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=YPIP275_RS00480;old_locus_tag=YPIP275_3540 NZ_AAOS02000001.1 Protein Homology CDS 98346 98765 . - 0 ID=cds-WP_002208578.1;Parent=gene-YPIP275_RS00480;Dbxref=GenBank:WP_002208578.1;Name=WP_002208578.1;Ontology_term=GO:0045893,GO:0046688,GO:0003677,GO:0003700,GO:0005507;gbkey=CDS;gene=cueR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,copper ion binding|0005507||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105555.1;locus_tag=YPIP275_RS00480;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_002208578.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 98972 101857 . + . ID=gene-YPIP275_RS00485;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00485;old_locus_tag=YPIP275_3541 NZ_AAOS02000001.1 Protein Homology CDS 98972 101857 . + 0 ID=cds-WP_002208579.1;Parent=gene-YPIP275_RS00485;Dbxref=GenBank:WP_002208579.1;Name=WP_002208579.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: protein motif:HMM:NF007952.0;locus_tag=YPIP275_RS00485;product=copper-exporting P-type ATPase CopA;protein_id=WP_002208579.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 102378 103187 . + . ID=gene-YPIP275_RS00490;Name=YPIP275_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00490;old_locus_tag=YPIP275_3542 NZ_AAOS02000001.1 Protein Homology CDS 102378 103187 . + 0 ID=cds-WP_002208580.1;Parent=gene-YPIP275_RS00490;Dbxref=GenBank:WP_002208580.1;Name=WP_002208580.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208580.1;locus_tag=YPIP275_RS00490;product=TraB/GumN family protein;protein_id=WP_002208580.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 103451 103930 . + . ID=gene-YPIP275_RS00495;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=YPIP275_RS00495;old_locus_tag=YPIP275_3543 NZ_AAOS02000001.1 Protein Homology CDS 103451 103930 . + 0 ID=cds-WP_002208581.1;Parent=gene-YPIP275_RS00495;Dbxref=GenBank:WP_002208581.1;Name=WP_002208581.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=YPIP275_RS00495;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_002208581.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 104267 104506 . + . ID=gene-YPIP275_RS00505;Name=YPIP275_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00505;old_locus_tag=YPIP275_3545 NZ_AAOS02000001.1 Protein Homology CDS 104267 104506 . + 0 ID=cds-WP_002208583.1;Parent=gene-YPIP275_RS00505;Dbxref=GenBank:WP_002208583.1;Name=WP_002208583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002429196.1;locus_tag=YPIP275_RS00505;product=hypothetical protein;protein_id=WP_002208583.1;transl_table=11 NZ_AAOS02000001.1 RefSeq pseudogene 104610 106265 . - . ID=gene-YPIP275_RS26590;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=pseudogene;locus_tag=YPIP275_RS26590;old_locus_tag=YPIP275_3546;pseudo=true NZ_AAOS02000001.1 Protein Homology CDS 104610 106265 . - 0 ID=cds-YPIP275_RS26590;Parent=gene-YPIP275_RS26590;Note=frameshifted;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105559.1;locus_tag=YPIP275_RS26590;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;pseudo=true;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 106547 107761 . + . ID=gene-YPIP275_RS00525;Name=rosA;gbkey=Gene;gene=rosA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00525;old_locus_tag=YPIP275_3548 NZ_AAOS02000001.1 Protein Homology CDS 106547 107761 . + 0 ID=cds-WP_002208584.1;Parent=gene-YPIP275_RS00525;Dbxref=GenBank:WP_002208584.1;Name=WP_002208584.1;gbkey=CDS;gene=rosA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082577.1;locus_tag=YPIP275_RS00525;product=MFS transporter RosA;protein_id=WP_002208584.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 107996 109687 . + . ID=gene-YPIP275_RS00530;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=YPIP275_RS00530;old_locus_tag=YPIP275_3549 NZ_AAOS02000001.1 Protein Homology CDS 107996 109687 . + 0 ID=cds-WP_002208585.1;Parent=gene-YPIP275_RS00530;Dbxref=GenBank:WP_002208585.1;Name=WP_002208585.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683715.1;locus_tag=YPIP275_RS00530;product=YbaL family putative K(+) efflux transporter;protein_id=WP_002208585.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 109784 111088 . - . ID=gene-YPIP275_RS00535;Name=YPIP275_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00535;old_locus_tag=YPIP275_3550 NZ_AAOS02000001.1 Protein Homology CDS 109784 111088 . - 0 ID=cds-WP_002208586.1;Parent=gene-YPIP275_RS00535;Dbxref=GenBank:WP_002208586.1;Name=WP_002208586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=YPIP275_RS00535;product=inosine/guanosine kinase;protein_id=WP_002208586.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 111292 112443 . - . ID=gene-YPIP275_RS00540;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=YPIP275_RS00540;old_locus_tag=YPIP275_3551 NZ_AAOS02000001.1 Protein Homology CDS 111292 112443 . - 0 ID=cds-WP_002208587.1;Parent=gene-YPIP275_RS00540;Dbxref=GenBank:WP_002208587.1;Name=WP_002208587.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304485.1;locus_tag=YPIP275_RS00540;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_002208587.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 112491 113864 . - . ID=gene-YPIP275_RS00545;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;locus_tag=YPIP275_RS00545;old_locus_tag=YPIP275_3552 NZ_AAOS02000001.1 Protein Homology CDS 112491 113864 . - 0 ID=cds-WP_002208588.1;Parent=gene-YPIP275_RS00545;Dbxref=GenBank:WP_002208588.1;Name=WP_002208588.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014462444.1;locus_tag=YPIP275_RS00545;product=phosphomannomutase CpsG;protein_id=WP_002208588.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 113869 114612 . - . ID=gene-YPIP275_RS00550;Name=YPIP275_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00550;old_locus_tag=YPIP275_3553 NZ_AAOS02000001.1 Protein Homology CDS 113869 114612 . - 0 ID=cds-WP_002208589.1;Parent=gene-YPIP275_RS00550;Dbxref=GenBank:WP_002208589.1;Name=WP_002208589.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264555.1;locus_tag=YPIP275_RS00550;product=glycosyltransferase family 2 protein;protein_id=WP_002208589.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 114615 116021 . - . ID=gene-YPIP275_RS00555;Name=YPIP275_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00555;old_locus_tag=YPIP275_3554 NZ_AAOS02000001.1 Protein Homology CDS 114615 116021 . - 0 ID=cds-WP_002208590.1;Parent=gene-YPIP275_RS00555;Dbxref=GenBank:WP_002208590.1;Name=WP_002208590.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001610403.1;locus_tag=YPIP275_RS00555;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_002208590.1;transl_table=11 NZ_AAOS02000001.1 RefSeq pseudogene 116229 117193 . - . ID=gene-YPIP275_RS00560;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=pseudogene;gene_synonym=wcaG,yefB;locus_tag=YPIP275_RS00560;old_locus_tag=YPIP275_3555;pseudo=true NZ_AAOS02000001.1 Protein Homology CDS 116229 117193 . - 0 ID=cds-YPIP275_RS00560;Parent=gene-YPIP275_RS00560;Note=frameshifted;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873393.1;locus_tag=YPIP275_RS00560;product=GDP-L-fucose synthase;pseudo=true;transl_table=11 NZ_AAOS02000001.1 RefSeq pseudogene 117199 118321 . - . ID=gene-YPIP275_RS00565;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=pseudogene;locus_tag=YPIP275_RS00565;pseudo=true NZ_AAOS02000001.1 Protein Homology CDS 117199 118321 . - 0 ID=cds-YPIP275_RS00565;Parent=gene-YPIP275_RS00565;Note=frameshifted;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310885.1;locus_tag=YPIP275_RS00565;product=GDP-mannose 4%2C6-dehydratase;pseudo=true;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 118337 119350 . - . ID=gene-YPIP275_RS00570;Name=YPIP275_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00570;old_locus_tag=YPIP275_3558 NZ_AAOS02000001.1 Protein Homology CDS 118337 119350 . - 0 ID=cds-WP_002208591.1;Parent=gene-YPIP275_RS00570;Dbxref=GenBank:WP_002208591.1;Name=WP_002208591.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191887.1;locus_tag=YPIP275_RS00570;product=glycosyltransferase family 4 protein;protein_id=WP_002208591.1;transl_table=11 NZ_AAOS02000001.1 RefSeq pseudogene 119599 120820 . - . ID=gene-YPIP275_RS00575;Name=wzy;gbkey=Gene;gene=wzy;gene_biotype=pseudogene;locus_tag=YPIP275_RS00575;old_locus_tag=YPIP275_3559;pseudo=true NZ_AAOS02000001.1 Protein Homology CDS 119599 120820 . - 0 ID=cds-YPIP275_RS00575;Parent=gene-YPIP275_RS00575;Note=frameshifted;gbkey=CDS;gene=wzy;inference=COORDINATES: protein motif:HMM:NF033860.0;locus_tag=YPIP275_RS00575;product=oligosaccharide repeat unit polymerase;pseudo=true;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 120817 121959 . - . ID=gene-YPIP275_RS00580;Name=YPIP275_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00580;old_locus_tag=YPIP275_3560 NZ_AAOS02000001.1 Protein Homology CDS 120817 121959 . - 0 ID=cds-WP_002208592.1;Parent=gene-YPIP275_RS00580;Dbxref=GenBank:WP_002208592.1;Name=WP_002208592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208592.1;locus_tag=YPIP275_RS00580;product=glycosyltransferase;protein_id=WP_002208592.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 122339 123052 . - . ID=gene-YPIP275_RS00585;Name=YPIP275_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00585;old_locus_tag=YPIP275_3561 NZ_AAOS02000001.1 Protein Homology CDS 122339 123052 . - 0 ID=cds-WP_002215988.1;Parent=gene-YPIP275_RS00585;Dbxref=GenBank:WP_002215988.1;Name=WP_002215988.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215988.1;locus_tag=YPIP275_RS00585;product=glycosyltransferase family 2 protein;protein_id=WP_002215988.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 123063 124406 . - . ID=gene-YPIP275_RS00590;Name=wzx;gbkey=Gene;gene=wzx;gene_biotype=protein_coding;locus_tag=YPIP275_RS00590;old_locus_tag=YPIP275_3562 NZ_AAOS02000001.1 Protein Homology CDS 123063 124406 . - 0 ID=cds-WP_002208593.1;Parent=gene-YPIP275_RS00590;Dbxref=GenBank:WP_002208593.1;Name=WP_002208593.1;gbkey=CDS;gene=wzx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413516.1;locus_tag=YPIP275_RS00590;product=O-unit flippase-like protein;protein_id=WP_002208593.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 124480 125763 . - . ID=gene-YPIP275_RS00595;Name=YPIP275_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00595;old_locus_tag=YPIP275_3563 NZ_AAOS02000001.1 Protein Homology CDS 124480 125763 . - 0 ID=cds-WP_002208594.1;Parent=gene-YPIP275_RS00595;Dbxref=GenBank:WP_002208594.1;Name=WP_002208594.1;Ontology_term=GO:0006779,GO:0009055,GO:0016491,GO:0071949;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191883.1;locus_tag=YPIP275_RS00595;product=protoporphyrinogen/coproporphyrinogen oxidase;protein_id=WP_002208594.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 125764 126621 . - . ID=gene-YPIP275_RS00600;Name=YPIP275_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00600;old_locus_tag=YPIP275_3564 NZ_AAOS02000001.1 Protein Homology CDS 125764 126621 . - 0 ID=cds-WP_002208595.1;Parent=gene-YPIP275_RS00600;Dbxref=GenBank:WP_002208595.1;Name=WP_002208595.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191882.1;locus_tag=YPIP275_RS00600;product=NAD-dependent epimerase/dehydratase;protein_id=WP_002208595.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 126658 127971 . - . ID=gene-YPIP275_RS00605;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=YPIP275_RS00605;old_locus_tag=YPIP275_3565 NZ_AAOS02000001.1 Protein Homology CDS 126658 127971 . - 0 ID=cds-WP_002208596.1;Parent=gene-YPIP275_RS00605;Dbxref=GenBank:WP_002208596.1;Name=WP_002208596.1;Ontology_term=GO:0003824;gbkey=CDS;gene=rfbH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082567.1;locus_tag=YPIP275_RS00605;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=WP_002208596.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 127989 128888 . - . ID=gene-YPIP275_RS00610;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=YPIP275_RS00610;old_locus_tag=YPIP275_3566 NZ_AAOS02000001.1 Protein Homology CDS 127989 128888 . - 0 ID=cds-WP_002354671.1;Parent=gene-YPIP275_RS00610;Dbxref=GenBank:WP_002354671.1;Name=WP_002354671.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: protein motif:HMM:TIGR02622.1;locus_tag=YPIP275_RS00610;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_002354671.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 128920 129063 . - . ID=gene-YPIP275_RS00615;Name=YPIP275_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00615 NZ_AAOS02000001.1 Protein Homology CDS 128920 129063 . - 0 ID=cds-WP_002215986.1;Parent=gene-YPIP275_RS00615;Dbxref=GenBank:WP_002215986.1;Name=WP_002215986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215986.1;locus_tag=YPIP275_RS00615;product=hypothetical protein;protein_id=WP_002215986.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 129068 129841 . - . ID=gene-YPIP275_RS00620;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=YPIP275_RS00620;old_locus_tag=YPIP275_3567 NZ_AAOS02000001.1 Protein Homology CDS 129068 129841 . - 0 ID=cds-WP_002208597.1;Parent=gene-YPIP275_RS00620;Dbxref=GenBank:WP_002208597.1;Name=WP_002208597.1;Ontology_term=GO:0009243,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=YPIP275_RS00620;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_002208597.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 129879 130868 . - . ID=gene-YPIP275_RS00625;Name=YPIP275_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00625;old_locus_tag=YPIP275_3568 NZ_AAOS02000001.1 Protein Homology CDS 129879 130868 . - 0 ID=cds-WP_002208598.1;Parent=gene-YPIP275_RS00625;Dbxref=GenBank:WP_002208598.1;Name=WP_002208598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208598.1;locus_tag=YPIP275_RS00625;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;protein_id=WP_002208598.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 131466 132428 . - . ID=gene-YPIP275_RS00630;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=YPIP275_RS00630;old_locus_tag=YPIP275_3569 NZ_AAOS02000001.1 Protein Homology CDS 131466 132428 . - 0 ID=cds-WP_002208599.1;Parent=gene-YPIP275_RS00630;Dbxref=GenBank:WP_002208599.1;Name=WP_002208599.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=protoporphyrin ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208599.1;locus_tag=YPIP275_RS00630;product=ferrochelatase;protein_id=WP_002208599.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 132518 133162 . - . ID=gene-YPIP275_RS00635;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=YPIP275_RS00635;old_locus_tag=YPIP275_3570 NZ_AAOS02000001.1 Protein Homology CDS 132518 133162 . - 0 ID=cds-WP_002208600.1;Parent=gene-YPIP275_RS00635;Dbxref=GenBank:WP_002208600.1;Name=WP_002208600.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=AMP kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415007.1;locus_tag=YPIP275_RS00635;product=adenylate kinase;protein_id=WP_002208600.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 133389 135257 . - . ID=gene-YPIP275_RS00640;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=YPIP275_RS00640;old_locus_tag=YPIP275_3571 NZ_AAOS02000001.1 Protein Homology CDS 133389 135257 . - 0 ID=cds-WP_002354670.1;Parent=gene-YPIP275_RS00640;Dbxref=GenBank:WP_002354670.1;Name=WP_002354670.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649462.1;locus_tag=YPIP275_RS00640;product=molecular chaperone HtpG;protein_id=WP_002354670.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 135455 136060 . - . ID=gene-YPIP275_RS00645;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=YPIP275_RS00645;old_locus_tag=YPIP275_3573 NZ_AAOS02000001.1 Protein Homology CDS 135455 136060 . - 0 ID=cds-WP_002208603.1;Parent=gene-YPIP275_RS00645;Dbxref=GenBank:WP_002208603.1;Name=WP_002208603.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081275.1;locus_tag=YPIP275_RS00645;product=recombination mediator RecR;protein_id=WP_002208603.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 136060 136392 . - . ID=gene-YPIP275_RS00650;Name=YPIP275_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00650;old_locus_tag=YPIP275_3574 NZ_AAOS02000001.1 Protein Homology CDS 136060 136392 . - 0 ID=cds-WP_002208604.1;Parent=gene-YPIP275_RS00650;Dbxref=GenBank:WP_002208604.1;Name=WP_002208604.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=YPIP275_RS00650;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_002208604.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 136448 138424 . - . ID=gene-YPIP275_RS00655;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=YPIP275_RS00655;old_locus_tag=YPIP275_3575 NZ_AAOS02000001.1 Protein Homology CDS 136448 138424 . - 0 ID=cds-WP_002208605.1;Parent=gene-YPIP275_RS00655;Dbxref=GenBank:WP_002208605.1;Name=WP_002208605.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208605.1;locus_tag=YPIP275_RS00655;product=DNA polymerase III subunit gamma/tau;protein_id=WP_002208605.1;transl_table=11 NZ_AAOS02000001.1 cmsearch sequence_feature 137054 137118 . - . ID=id-YPIP275_RS00655;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS00655 NZ_AAOS02000001.1 RefSeq gene 139080 139643 . - . ID=gene-YPIP275_RS00660;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=YPIP275_RS00660;old_locus_tag=YPIP275_3576 NZ_AAOS02000001.1 Protein Homology CDS 139080 139643 . - 0 ID=cds-WP_002208606.1;Parent=gene-YPIP275_RS00660;Dbxref=GenBank:WP_002208606.1;Name=WP_002208606.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105567.1;locus_tag=YPIP275_RS00660;product=adenine phosphoribosyltransferase;protein_id=WP_002208606.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 140060 140842 . - . ID=gene-YPIP275_RS00665;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS00665;old_locus_tag=YPIP275_3578 NZ_AAOS02000001.1 Protein Homology CDS 140060 140842 . - 0 ID=cds-WP_001317493.1-50;Parent=gene-YPIP275_RS00665;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS00665;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 140839 141861 . - . ID=gene-YPIP275_RS00670;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00670;old_locus_tag=YPIP275_3579 NZ_AAOS02000001.1 Protein Homology CDS 140839 141861 . - 0 ID=cds-WP_000255944.1-44;Parent=gene-YPIP275_RS00670;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS00670;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000001.1 RefSeq pseudogene 141946 142221 . - . ID=gene-YPIP275_RS00675;Name=YPIP275_RS00675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS00675;partial=true;pseudo=true;start_range=.,141946 NZ_AAOS02000001.1 Protein Homology CDS 141946 142221 . - 0 ID=cds-YPIP275_RS00675;Parent=gene-YPIP275_RS00675;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005572.1;locus_tag=YPIP275_RS00675;partial=true;product=DUF454 family protein;pseudo=true;start_range=.,141946;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 142422 142958 . + . ID=gene-YPIP275_RS00680;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=YPIP275_RS00680;old_locus_tag=YPIP275_3582 NZ_AAOS02000001.1 Protein Homology CDS 142422 142958 . + 0 ID=cds-WP_002208610.1;Parent=gene-YPIP275_RS00680;Dbxref=GenBank:WP_002208610.1;Name=WP_002208610.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191876.1;locus_tag=YPIP275_RS00680;product=primosomal replication protein PriC;protein_id=WP_002208610.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 143129 143284 . + . ID=gene-YPIP275_RS00685;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=YPIP275_RS00685;old_locus_tag=YPIP275_3583 NZ_AAOS02000001.1 Protein Homology CDS 143129 143284 . + 0 ID=cds-WP_002208611.1;Parent=gene-YPIP275_RS00685;Dbxref=GenBank:WP_002208611.1;Name=WP_002208611.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208611.1;locus_tag=YPIP275_RS00685;product=pleiotropic regulatory protein RsmS;protein_id=WP_002208611.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 143624 146986 . - . ID=gene-YPIP275_RS00690;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=YPIP275_RS00690;old_locus_tag=YPIP275_3584 NZ_AAOS02000001.1 Protein Homology CDS 143624 146986 . - 0 ID=cds-WP_002208612.1;Parent=gene-YPIP275_RS00690;Dbxref=GenBank:WP_002208612.1;Name=WP_002208612.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016599076.1;locus_tag=YPIP275_RS00690;product=mechanosensitive channel MscK;protein_id=WP_002208612.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 147282 147635 . - . ID=gene-YPIP275_RS00695;Name=YPIP275_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00695;old_locus_tag=YPIP275_3585 NZ_AAOS02000001.1 Protein Homology CDS 147282 147635 . - 0 ID=cds-WP_002208613.1;Parent=gene-YPIP275_RS00695;Dbxref=GenBank:WP_002208613.1;Name=WP_002208613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304498.1;locus_tag=YPIP275_RS00695;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_002208613.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 147648 148304 . - . ID=gene-YPIP275_RS00700;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=YPIP275_RS00700;old_locus_tag=YPIP275_3586 NZ_AAOS02000001.1 Protein Homology CDS 147648 148304 . - 0 ID=cds-WP_002208614.1;Parent=gene-YPIP275_RS00700;Dbxref=GenBank:WP_002208614.1;Name=WP_002208614.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208614.1;locus_tag=YPIP275_RS00700;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_002208614.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 148449 149636 . + . ID=gene-YPIP275_RS00705;Name=YPIP275_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00705;old_locus_tag=YPIP275_3587 NZ_AAOS02000001.1 Protein Homology CDS 148449 149636 . + 0 ID=cds-WP_002208615.1;Parent=gene-YPIP275_RS00705;Dbxref=GenBank:WP_002208615.1;Name=WP_002208615.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005158151.1;locus_tag=YPIP275_RS00705;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_002208615.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 149653 152805 . + . ID=gene-YPIP275_RS00710;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=YPIP275_RS00710;old_locus_tag=YPIP275_3588 NZ_AAOS02000001.1 Protein Homology CDS 149653 152805 . + 0 ID=cds-WP_002208616.1;Parent=gene-YPIP275_RS00710;Dbxref=GenBank:WP_002208616.1;Name=WP_002208616.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167694.1;locus_tag=YPIP275_RS00710;product=efflux RND transporter permease AcrB;protein_id=WP_002208616.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 152991 153251 . + . ID=gene-YPIP275_RS00715;Name=YPIP275_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00715;old_locus_tag=YPIP275_3589 NZ_AAOS02000001.1 Protein Homology CDS 152991 153251 . + 0 ID=cds-WP_002208617.1;Parent=gene-YPIP275_RS00715;Dbxref=GenBank:WP_002208617.1;Name=WP_002208617.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208617.1;locus_tag=YPIP275_RS00715;product=type B 50S ribosomal protein L31;protein_id=WP_002208617.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 153267 153410 . + . ID=gene-YPIP275_RS00720;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=YPIP275_RS00720;old_locus_tag=YPIP275_3590 NZ_AAOS02000001.1 Protein Homology CDS 153267 153410 . + 0 ID=cds-WP_002208618.1;Parent=gene-YPIP275_RS00720;Dbxref=GenBank:WP_002208618.1;Name=WP_002208618.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208618.1;locus_tag=YPIP275_RS00720;product=type B 50S ribosomal protein L36;protein_id=WP_002208618.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 154284 154637 . + . ID=gene-YPIP275_RS00725;Name=YPIP275_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00725;old_locus_tag=YPIP275_3591 NZ_AAOS02000001.1 Protein Homology CDS 154284 154637 . + 0 ID=cds-WP_002208619.1;Parent=gene-YPIP275_RS00725;Dbxref=GenBank:WP_002208619.1;Name=WP_002208619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105569.1;locus_tag=YPIP275_RS00725;product=hypothetical protein;protein_id=WP_002208619.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 154796 155164 . + . ID=gene-YPIP275_RS00730;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=YPIP275_RS00730 NZ_AAOS02000001.1 Protein Homology CDS 154796 155164 . + 0 ID=cds-WP_002218472.1;Parent=gene-YPIP275_RS00730;Dbxref=GenBank:WP_002218472.1;Name=WP_002218472.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703332.1;locus_tag=YPIP275_RS00730;product=Hha toxicity modulator TomB;protein_id=WP_002218472.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 155213 155416 . + . ID=gene-YPIP275_RS00735;Name=ymoA;gbkey=Gene;gene=ymoA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00735;old_locus_tag=YPIP275_3594 NZ_AAOS02000001.1 Protein Homology CDS 155213 155416 . + 0 ID=cds-WP_002208622.1;Parent=gene-YPIP275_RS00735;Dbxref=GenBank:WP_002208622.1;Name=WP_002208622.1;gbkey=CDS;gene=ymoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006705087.1;locus_tag=YPIP275_RS00735;product=expression modulating protein YmoA;protein_id=WP_002208622.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 155958 156054 . - . ID=gene-YPIP275_RS26610;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=YPIP275_RS26610 NZ_AAOS02000001.1 cmsearch SRP_RNA 155958 156054 . - . ID=rna-YPIP275_RS26610;Parent=gene-YPIP275_RS26610;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS26610;product=signal recognition particle sRNA small type NZ_AAOS02000001.1 cmsearch exon 155958 156054 . - . ID=exon-YPIP275_RS26610-1;Parent=rna-YPIP275_RS26610;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS26610;product=signal recognition particle sRNA small type NZ_AAOS02000001.1 RefSeq gene 156304 156693 . + . ID=gene-YPIP275_RS00740;Name=YPIP275_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00740;old_locus_tag=YPIP275_3595 NZ_AAOS02000001.1 Protein Homology CDS 156304 156693 . + 0 ID=cds-WP_002208623.1;Parent=gene-YPIP275_RS00740;Dbxref=GenBank:WP_002208623.1;Name=WP_002208623.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208623.1;locus_tag=YPIP275_RS00740;product=MGMT family protein;protein_id=WP_002208623.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 156829 157350 . - . ID=gene-YPIP275_RS00745;Name=YPIP275_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00745;old_locus_tag=YPIP275_3596 NZ_AAOS02000001.1 Protein Homology CDS 156829 157350 . - 0 ID=cds-WP_002208624.1;Parent=gene-YPIP275_RS00745;Dbxref=GenBank:WP_002208624.1;Name=WP_002208624.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413513.1;locus_tag=YPIP275_RS00745;product=YbaY family lipoprotein;protein_id=WP_002208624.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 157607 158467 . + . ID=gene-YPIP275_RS00750;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=YPIP275_RS00750;old_locus_tag=YPIP275_3597 NZ_AAOS02000001.1 Protein Homology CDS 157607 158467 . + 0 ID=cds-WP_002208625.1;Parent=gene-YPIP275_RS00750;Dbxref=GenBank:WP_002208625.1;Name=WP_002208625.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105571.1;locus_tag=YPIP275_RS00750;product=acyl-CoA thioesterase II;protein_id=WP_002208625.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 158727 160016 . - . ID=gene-YPIP275_RS00755;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=YPIP275_RS00755;old_locus_tag=YPIP275_3598 NZ_AAOS02000001.1 Protein Homology CDS 158727 160016 . - 0 ID=cds-WP_002228344.1;Parent=gene-YPIP275_RS00755;Dbxref=GenBank:WP_002228344.1;Name=WP_002228344.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004718723.1;locus_tag=YPIP275_RS00755;product=ammonium transporter AmtB;protein_id=WP_002228344.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 160056 160394 . - . ID=gene-YPIP275_RS00760;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=YPIP275_RS00760;old_locus_tag=YPIP275_3599 NZ_AAOS02000001.1 Protein Homology CDS 160056 160394 . - 0 ID=cds-WP_002208627.1;Parent=gene-YPIP275_RS00760;Dbxref=GenBank:WP_002208627.1;Name=WP_002208627.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225455.1;locus_tag=YPIP275_RS00760;product=P-II family nitrogen regulator;protein_id=WP_002208627.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 160804 162627 . - . ID=gene-YPIP275_RS00765;Name=YPIP275_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00765;old_locus_tag=YPIP275_3600 NZ_AAOS02000001.1 Protein Homology CDS 160804 162627 . - 0 ID=cds-WP_002208628.1;Parent=gene-YPIP275_RS00765;Dbxref=GenBank:WP_002208628.1;Name=WP_002208628.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208628.1;locus_tag=YPIP275_RS00765;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_002208628.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 162620 164386 . - . ID=gene-YPIP275_RS00770;Name=YPIP275_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00770;old_locus_tag=YPIP275_3601 NZ_AAOS02000001.1 Protein Homology CDS 162620 164386 . - 0 ID=cds-WP_002208629.1;Parent=gene-YPIP275_RS00770;Dbxref=GenBank:WP_002208629.1;Name=WP_002208629.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191870.1;locus_tag=YPIP275_RS00770;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_002208629.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 164488 164949 . - . ID=gene-YPIP275_RS00775;Name=YPIP275_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00775;old_locus_tag=YPIP275_3602 NZ_AAOS02000001.1 Protein Homology CDS 164488 164949 . - 0 ID=cds-WP_002208630.1;Parent=gene-YPIP275_RS00775;Dbxref=GenBank:WP_002208630.1;Name=WP_002208630.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208630.1;locus_tag=YPIP275_RS00775;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_002208630.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 165075 166115 . + . ID=gene-YPIP275_RS00780;Name=YPIP275_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00780;old_locus_tag=YPIP275_3603 NZ_AAOS02000001.1 Protein Homology CDS 165075 166115 . + 0 ID=cds-WP_002208631.1;Parent=gene-YPIP275_RS00780;Dbxref=GenBank:WP_002208631.1;Name=WP_002208631.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392656.1;locus_tag=YPIP275_RS00780;product=PLP-dependent cysteine synthase family protein;protein_id=WP_002208631.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 166327 167148 . - . ID=gene-YPIP275_RS00785;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=YPIP275_RS00785;old_locus_tag=YPIP275_3604 NZ_AAOS02000001.1 Protein Homology CDS 166327 167148 . - 0 ID=cds-WP_002208632.1;Parent=gene-YPIP275_RS00785;Dbxref=GenBank:WP_002208632.1;Name=WP_002208632.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873440.1;locus_tag=YPIP275_RS00785;product=HMP-PP phosphatase;protein_id=WP_002208632.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 167253 168956 . + . ID=gene-YPIP275_RS00790;Name=YPIP275_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00790;old_locus_tag=YPIP275_3605 NZ_AAOS02000001.1 Protein Homology CDS 167253 168956 . + 0 ID=cds-WP_002208633.1;Parent=gene-YPIP275_RS00790;Dbxref=GenBank:WP_002208633.1;Name=WP_002208633.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208633.1;locus_tag=YPIP275_RS00790;product=SgrR family transcriptional regulator;protein_id=WP_002208633.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 169221 169919 . + . ID=gene-YPIP275_RS00795;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=YPIP275_RS00795;old_locus_tag=YPIP275_3606 NZ_AAOS02000001.1 Protein Homology CDS 169221 169919 . + 0 ID=cds-WP_002208635.1;Parent=gene-YPIP275_RS00795;Dbxref=GenBank:WP_002208635.1;Name=WP_002208635.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208635.1;locus_tag=YPIP275_RS00795;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_002208635.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 170005 170412 . - . ID=gene-YPIP275_RS00800;Name=YPIP275_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00800;old_locus_tag=YPIP275_3607 NZ_AAOS02000001.1 Protein Homology CDS 170005 170412 . - 0 ID=cds-WP_002208636.1;Parent=gene-YPIP275_RS00800;Dbxref=GenBank:WP_002208636.1;Name=WP_002208636.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016581045.1;locus_tag=YPIP275_RS00800;product=acyl-CoA thioesterase;protein_id=WP_002208636.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 170766 171212 . - . ID=gene-YPIP275_RS00805;Name=YPIP275_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00805;old_locus_tag=YPIP275_3608 NZ_AAOS02000001.1 Protein Homology CDS 170766 171212 . - 0 ID=cds-WP_002208637.1;Parent=gene-YPIP275_RS00805;Dbxref=GenBank:WP_002208637.1;Name=WP_002208637.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105574.1;locus_tag=YPIP275_RS00805;product=ComEA family DNA-binding protein;protein_id=WP_002208637.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 171352 173238 . - . ID=gene-YPIP275_RS00810;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=YPIP275_RS00810;old_locus_tag=YPIP275_3609 NZ_AAOS02000001.1 Protein Homology CDS 171352 173238 . - 0 ID=cds-WP_002208638.1;Parent=gene-YPIP275_RS00810;Dbxref=GenBank:WP_002208638.1;Name=WP_002208638.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208638.1;locus_tag=YPIP275_RS00810;product=peptidylprolyl isomerase;protein_id=WP_002208638.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 173539 173811 . - . ID=gene-YPIP275_RS00815;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=YPIP275_RS00815;old_locus_tag=YPIP275_3610 NZ_AAOS02000001.1 Protein Homology CDS 173539 173811 . - 0 ID=cds-WP_002208639.1;Parent=gene-YPIP275_RS00815;Dbxref=GenBank:WP_002208639.1;Name=WP_002208639.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1;locus_tag=YPIP275_RS00815;product=nucleoid-associated protein HU-beta;protein_id=WP_002208639.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 174029 176383 . - . ID=gene-YPIP275_RS00820;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=YPIP275_RS00820;old_locus_tag=YPIP275_3611 NZ_AAOS02000001.1 Protein Homology CDS 174029 176383 . - 0 ID=cds-WP_002208640.1;Parent=gene-YPIP275_RS00820;Dbxref=GenBank:WP_002208640.1;Name=WP_002208640.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208640.1;locus_tag=YPIP275_RS00820;product=endopeptidase La;protein_id=WP_002208640.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 176578 177849 . - . ID=gene-YPIP275_RS00825;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=YPIP275_RS00825;old_locus_tag=YPIP275_3612 NZ_AAOS02000001.1 Protein Homology CDS 176578 177849 . - 0 ID=cds-WP_002208641.1;Parent=gene-YPIP275_RS00825;Dbxref=GenBank:WP_002208641.1;Name=WP_002208641.1;Ontology_term=GO:0005524,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130313.1;locus_tag=YPIP275_RS00825;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_002208641.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 178055 178678 . - . ID=gene-YPIP275_RS00830;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=YPIP275_RS00830;old_locus_tag=YPIP275_3613 NZ_AAOS02000001.1 Protein Homology CDS 178055 178678 . - 0 ID=cds-WP_002208642.1;Parent=gene-YPIP275_RS00830;Dbxref=GenBank:WP_002208642.1;Name=WP_002208642.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308518.1;locus_tag=YPIP275_RS00830;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_002208642.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 179140 180444 . - . ID=gene-YPIP275_RS00835;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=YPIP275_RS00835;old_locus_tag=YPIP275_3614 NZ_AAOS02000001.1 Protein Homology CDS 179140 180444 . - 0 ID=cds-WP_002208643.1;Parent=gene-YPIP275_RS00835;Dbxref=GenBank:WP_002208643.1;Name=WP_002208643.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703366.1;locus_tag=YPIP275_RS00835;product=trigger factor;protein_id=WP_002208643.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 180861 181181 . - . ID=gene-YPIP275_RS00845;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00845;old_locus_tag=YPIP275_3615 NZ_AAOS02000001.1 Protein Homology CDS 180861 181181 . - 0 ID=cds-WP_002208644.1;Parent=gene-YPIP275_RS00845;Dbxref=GenBank:WP_002208644.1;Name=WP_002208644.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208644.1;locus_tag=YPIP275_RS00845;product=transcriptional regulator BolA;protein_id=WP_002208644.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 181530 182108 . + . ID=gene-YPIP275_RS00850;Name=YPIP275_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00850;old_locus_tag=YPIP275_3616 NZ_AAOS02000001.1 Protein Homology CDS 181530 182108 . + 0 ID=cds-WP_002208646.1;Parent=gene-YPIP275_RS00850;Dbxref=GenBank:WP_002208646.1;Name=WP_002208646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208646.1;locus_tag=YPIP275_RS00850;product=lipoprotein;protein_id=WP_002208646.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 182226 183704 . + . ID=gene-YPIP275_RS00855;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=YPIP275_RS00855;old_locus_tag=YPIP275_3617 NZ_AAOS02000001.1 Protein Homology CDS 182226 183704 . + 0 ID=cds-WP_002208647.1;Parent=gene-YPIP275_RS00855;Dbxref=GenBank:WP_002208647.1;Name=WP_002208647.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906380.1;locus_tag=YPIP275_RS00855;product=muropeptide MFS transporter AmpG;protein_id=WP_002208647.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 183996 184763 . + . ID=gene-YPIP275_RS00860;Name=YPIP275_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00860;old_locus_tag=YPIP275_3618 NZ_AAOS02000001.1 Protein Homology CDS 183996 184763 . + 0 ID=cds-WP_002208648.1;Parent=gene-YPIP275_RS00860;Dbxref=GenBank:WP_002208648.1;Name=WP_002208648.1;Ontology_term=GO:0015858,GO:0015471,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside-specific channel forming porin activity|0015471||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208648.1;locus_tag=YPIP275_RS00860;product=nucleoside-specific channel-forming Tsx family protein;protein_id=WP_002208648.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 185133 186089 . + . ID=gene-YPIP275_RS00865;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00865;old_locus_tag=YPIP275_3619 NZ_AAOS02000001.1 Protein Homology CDS 185133 186089 . + 0 ID=cds-WP_002208649.1;Parent=gene-YPIP275_RS00865;Dbxref=GenBank:WP_002208649.1;Name=WP_002208649.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167626.1;locus_tag=YPIP275_RS00865;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_002208649.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 186094 188085 . + . ID=gene-YPIP275_RS00870;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=YPIP275_RS00870;old_locus_tag=YPIP275_3620 NZ_AAOS02000001.1 Protein Homology CDS 186094 188085 . + 0 ID=cds-WP_002208650.1;Parent=gene-YPIP275_RS00870;Dbxref=GenBank:WP_002208650.1;Name=WP_002208650.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308512.1;locus_tag=YPIP275_RS00870;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_002208650.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 188075 188689 . + . ID=gene-YPIP275_RS00875;Name=YPIP275_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00875;old_locus_tag=YPIP275_3621 NZ_AAOS02000001.1 Protein Homology CDS 188075 188689 . + 0 ID=cds-WP_002208651.1;Parent=gene-YPIP275_RS00875;Dbxref=GenBank:WP_002208651.1;Name=WP_002208651.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208651.1;locus_tag=YPIP275_RS00875;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_002208651.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 188689 189021 . + . ID=gene-YPIP275_RS00880;Name=YPIP275_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00880;old_locus_tag=YPIP275_3622 NZ_AAOS02000001.1 Protein Homology CDS 188689 189021 . + 0 ID=cds-WP_002208652.1;Parent=gene-YPIP275_RS00880;Dbxref=GenBank:WP_002208652.1;Name=WP_002208652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208652.1;locus_tag=YPIP275_RS00880;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_002208652.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 189035 189922 . + . ID=gene-YPIP275_RS00885;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=YPIP275_RS00885;old_locus_tag=YPIP275_3623 NZ_AAOS02000001.1 Protein Homology CDS 189035 189922 . + 0 ID=cds-WP_002208653.1;Parent=gene-YPIP275_RS00885;Dbxref=GenBank:WP_002208653.1;Name=WP_002208653.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208653.1;locus_tag=YPIP275_RS00885;product=heme o synthase;protein_id=WP_002208653.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 190406 191770 . + . ID=gene-YPIP275_RS00890;Name=YPIP275_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00890;old_locus_tag=YPIP275_3624 NZ_AAOS02000001.1 Protein Homology CDS 190406 191770 . + 0 ID=cds-WP_002216717.1;Parent=gene-YPIP275_RS00890;Dbxref=GenBank:WP_002216717.1;Name=WP_002216717.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216717.1;locus_tag=YPIP275_RS00890;product=MFS transporter;protein_id=WP_002216717.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 191894 192385 . - . ID=gene-YPIP275_RS00895;Name=YPIP275_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00895;old_locus_tag=YPIP275_3625 NZ_AAOS02000001.1 Protein Homology CDS 191894 192385 . - 0 ID=cds-WP_002208655.1;Parent=gene-YPIP275_RS00895;Dbxref=GenBank:WP_002208655.1;Name=WP_002208655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082537.1;locus_tag=YPIP275_RS00895;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_002208655.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 192617 193528 . + . ID=gene-YPIP275_RS00900;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=YPIP275_RS00900;old_locus_tag=YPIP275_3626 NZ_AAOS02000001.1 Protein Homology CDS 192617 193528 . + 0 ID=cds-WP_002208656.1;Parent=gene-YPIP275_RS00900;Dbxref=GenBank:WP_002208656.1;Name=WP_002208656.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208656.1;locus_tag=YPIP275_RS00900;product=2-dehydropantoate 2-reductase;protein_id=WP_002208656.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 193491 194081 . + . ID=gene-YPIP275_RS00905;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=YPIP275_RS00905;old_locus_tag=YPIP275_3627 NZ_AAOS02000001.1 Protein Homology CDS 193491 194081 . + 0 ID=cds-WP_002208657.1;Parent=gene-YPIP275_RS00905;Dbxref=GenBank:WP_002208657.1;Name=WP_002208657.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323929.1;locus_tag=YPIP275_RS00905;product=protein deglycase YajL;protein_id=WP_002208657.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 194149 195600 . - . ID=gene-YPIP275_RS00910;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=YPIP275_RS00910;old_locus_tag=YPIP275_3628 NZ_AAOS02000001.1 Protein Homology CDS 194149 195600 . - 0 ID=cds-WP_002208658.1;Parent=gene-YPIP275_RS00910;Dbxref=GenBank:WP_002208658.1;Name=WP_002208658.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225415.1;locus_tag=YPIP275_RS00910;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_002208658.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 195950 196204 . + . ID=gene-YPIP275_RS00920;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=YPIP275_RS00920;old_locus_tag=YPIP275_3630 NZ_AAOS02000001.1 Protein Homology CDS 195950 196204 . + 0 ID=cds-WP_002208660.1;Parent=gene-YPIP275_RS00920;Dbxref=GenBank:WP_002208660.1;Name=WP_002208660.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304509.1;locus_tag=YPIP275_RS00920;product=exodeoxyribonuclease VII small subunit;protein_id=WP_002208660.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 196209 197129 . + . ID=gene-YPIP275_RS00925;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00925;old_locus_tag=YPIP275_3631 NZ_AAOS02000001.1 Protein Homology CDS 196209 197129 . + 0 ID=cds-WP_002208661.1;Parent=gene-YPIP275_RS00925;Dbxref=GenBank:WP_002208661.1;Name=WP_002208661.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208661.1;locus_tag=YPIP275_RS00925;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_002208661.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 197285 199144 . + . ID=gene-YPIP275_RS00930;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=YPIP275_RS00930;old_locus_tag=YPIP275_3632 NZ_AAOS02000001.1 Protein Homology CDS 197285 199144 . + 0 ID=cds-WP_002208662.1;Parent=gene-YPIP275_RS00930;Dbxref=GenBank:WP_002208662.1;Name=WP_002208662.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163551.1;locus_tag=YPIP275_RS00930;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_002208662.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 199323 199781 . - . ID=gene-YPIP275_RS00935;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00935;old_locus_tag=YPIP275_3633 NZ_AAOS02000001.1 Protein Homology CDS 199323 199781 . - 0 ID=cds-WP_002213759.1-33;Parent=gene-YPIP275_RS00935;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS00935;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 199995 200480 . - . ID=gene-YPIP275_RS00945;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00945;old_locus_tag=YPIP275_3634 NZ_AAOS02000001.1 Protein Homology CDS 199995 200480 . - 0 ID=cds-WP_002208663.1;Parent=gene-YPIP275_RS00945;Dbxref=GenBank:WP_002208663.1;Name=WP_002208663.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208663.1;locus_tag=YPIP275_RS00945;product=phosphatidylglycerophosphatase A;protein_id=WP_002208663.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 200473 201462 . - . ID=gene-YPIP275_RS00950;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=YPIP275_RS00950;old_locus_tag=YPIP275_3635 NZ_AAOS02000001.1 Protein Homology CDS 200473 201462 . - 0 ID=cds-WP_002208664.1;Parent=gene-YPIP275_RS00950;Dbxref=GenBank:WP_002208664.1;Name=WP_002208664.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208664.1;locus_tag=YPIP275_RS00950;product=thiamine-phosphate kinase;protein_id=WP_002208664.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 201703 202119 . - . ID=gene-YPIP275_RS00955;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=YPIP275_RS00955;old_locus_tag=YPIP275_3636 NZ_AAOS02000001.1 Protein Homology CDS 201703 202119 . - 0 ID=cds-WP_002208665.1;Parent=gene-YPIP275_RS00955;Dbxref=GenBank:WP_002208665.1;Name=WP_002208665.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393185.1;locus_tag=YPIP275_RS00955;product=transcription antitermination factor NusB;protein_id=WP_002208665.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 202140 202610 . - . ID=gene-YPIP275_RS00960;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=YPIP275_RS00960;old_locus_tag=YPIP275_3637 NZ_AAOS02000001.1 Protein Homology CDS 202140 202610 . - 0 ID=cds-WP_002208666.1;Parent=gene-YPIP275_RS00960;Dbxref=GenBank:WP_002208666.1;Name=WP_002208666.1;Ontology_term=GO:0009231,GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005182120.1;locus_tag=YPIP275_RS00960;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_002208666.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 202746 203855 . - . ID=gene-YPIP275_RS00965;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=YPIP275_RS00965;old_locus_tag=YPIP275_3638 NZ_AAOS02000001.1 Protein Homology CDS 202746 203855 . - 0 ID=cds-WP_002208667.1;Parent=gene-YPIP275_RS00965;Dbxref=GenBank:WP_002208667.1;Name=WP_002208667.1;Ontology_term=GO:0009231,GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016678527.1;locus_tag=YPIP275_RS00965;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_002208667.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 204005 204454 . - . ID=gene-YPIP275_RS00970;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=YPIP275_RS00970;old_locus_tag=YPIP275_3639 NZ_AAOS02000001.1 Protein Homology CDS 204005 204454 . - 0 ID=cds-WP_002208668.1;Parent=gene-YPIP275_RS00970;Dbxref=GenBank:WP_002208668.1;Name=WP_002208668.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=YPIP275_RS00970;product=transcriptional regulator NrdR;protein_id=WP_002208668.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 204525 205118 . - . ID=gene-YPIP275_RS00975;Name=YPIP275_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00975;old_locus_tag=YPIP275_3640 NZ_AAOS02000001.1 Protein Homology CDS 204525 205118 . - 0 ID=cds-WP_002217141.1;Parent=gene-YPIP275_RS00975;Dbxref=GenBank:WP_002217141.1;Name=WP_002217141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217141.1;locus_tag=YPIP275_RS00975;product=hypothetical protein;protein_id=WP_002217141.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 205151 205846 . - . ID=gene-YPIP275_RS00980;Name=YPIP275_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS00980;old_locus_tag=YPIP275_3641 NZ_AAOS02000001.1 Protein Homology CDS 205151 205846 . - 0 ID=cds-WP_002217139.1;Parent=gene-YPIP275_RS00980;Dbxref=GenBank:WP_002217139.1;Name=WP_002217139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002217139.1;locus_tag=YPIP275_RS00980;product=hypothetical protein;protein_id=WP_002217139.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 206144 206602 . - . ID=gene-YPIP275_RS00985;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS00985;old_locus_tag=YPIP275_3642 NZ_AAOS02000001.1 Protein Homology CDS 206144 206602 . - 0 ID=cds-WP_002213759.1-34;Parent=gene-YPIP275_RS00985;Dbxref=GenBank:WP_002213759.1;Name=WP_002213759.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS00985;product=IS200/IS605-like element IS1541A family transposase;protein_id=WP_002213759.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 206809 207777 . - . ID=gene-YPIP275_RS00990;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=YPIP275_RS00990;old_locus_tag=YPIP275_3643 NZ_AAOS02000001.1 Protein Homology CDS 206809 207777 . - 0 ID=cds-WP_002208669.1;Parent=gene-YPIP275_RS00990;Dbxref=GenBank:WP_002208669.1;Name=WP_002208669.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308487.1;locus_tag=YPIP275_RS00990;product=protein translocase subunit SecF;protein_id=WP_002208669.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 207788 209635 . - . ID=gene-YPIP275_RS00995;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=YPIP275_RS00995;old_locus_tag=YPIP275_3644 NZ_AAOS02000001.1 Protein Homology CDS 207788 209635 . - 0 ID=cds-WP_002208670.1;Parent=gene-YPIP275_RS00995;Dbxref=GenBank:WP_002208670.1;Name=WP_002208670.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=YPIP275_RS00995;product=protein translocase subunit SecD;protein_id=WP_002208670.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 209663 209998 . - . ID=gene-YPIP275_RS01000;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=YPIP275_RS01000;old_locus_tag=YPIP275_3645 NZ_AAOS02000001.1 Protein Homology CDS 209663 209998 . - 0 ID=cds-WP_002208671.1;Parent=gene-YPIP275_RS01000;Dbxref=GenBank:WP_002208671.1;Name=WP_002208671.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=YPIP275_RS01000;product=preprotein translocase subunit YajC;protein_id=WP_002208671.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 210110 211234 . - . ID=gene-YPIP275_RS01005;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=YPIP275_RS01005;old_locus_tag=YPIP275_3646 NZ_AAOS02000001.1 Protein Homology CDS 210110 211234 . - 0 ID=cds-WP_002208672.1;Parent=gene-YPIP275_RS01005;Dbxref=GenBank:WP_002208672.1;Name=WP_002208672.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873475.1;locus_tag=YPIP275_RS01005;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_002208672.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 211327 212397 . - . ID=gene-YPIP275_RS01010;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01010;old_locus_tag=YPIP275_3647 NZ_AAOS02000001.1 Protein Homology CDS 211327 212397 . - 0 ID=cds-WP_002208673.1;Parent=gene-YPIP275_RS01010;Dbxref=GenBank:WP_002208673.1;Name=WP_002208673.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304512.1;locus_tag=YPIP275_RS01010;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_002208673.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 212600 213181 . + . ID=gene-YPIP275_RS01015;Name=YPIP275_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01015;old_locus_tag=YPIP275_3648 NZ_AAOS02000001.1 Protein Homology CDS 212600 213181 . + 0 ID=cds-WP_002216927.1;Parent=gene-YPIP275_RS01015;Dbxref=GenBank:WP_002216927.1;Name=WP_002216927.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216927.1;locus_tag=YPIP275_RS01015;product=ACP phosphodiesterase;protein_id=WP_002216927.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 213480 214082 . + . ID=gene-YPIP275_RS01020;Name=YPIP275_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01020;old_locus_tag=YPIP275_3649 NZ_AAOS02000001.1 Protein Homology CDS 213480 214082 . + 0 ID=cds-WP_002208675.1;Parent=gene-YPIP275_RS01020;Dbxref=GenBank:WP_002208675.1;Name=WP_002208675.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005160596.1;locus_tag=YPIP275_RS01020;product=peroxiredoxin C;protein_id=WP_002208675.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 214297 214755 . + . ID=gene-YPIP275_RS01025;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01025;old_locus_tag=YPIP275_3650 NZ_AAOS02000001.1 Protein Homology CDS 214297 214755 . + 0 ID=cds-WP_002213775.1-41;Parent=gene-YPIP275_RS01025;Dbxref=GenBank:WP_002213775.1;Name=WP_002213775.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550737.1;locus_tag=YPIP275_RS01025;product=IS200/IS605-like element IS1541B family transposase;protein_id=WP_002213775.1;transl_table=11 NZ_AAOS02000001.1 RefSeq pseudogene 215183 216948 . + . ID=gene-YPIP275_RS01040;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=pseudogene;locus_tag=YPIP275_RS01040;old_locus_tag=YPIP275_3651;pseudo=true NZ_AAOS02000001.1 Protein Homology CDS 215183 216948 . + 0 ID=cds-YPIP275_RS01040;Parent=gene-YPIP275_RS01040;Note=frameshifted;Ontology_term=GO:0006750,GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione gamma-glutamate hydrolase|0036374||IEA;go_process=glutathione biosynthetic process|0006750||IEA,glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811722.1;locus_tag=YPIP275_RS01040;product=gamma-glutamyltransferase;pseudo=true;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 217156 217836 . - . ID=gene-YPIP275_RS01045;Name=YPIP275_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01045;old_locus_tag=YPIP275_3652 NZ_AAOS02000001.1 Protein Homology CDS 217156 217836 . - 0 ID=cds-WP_002208677.1;Parent=gene-YPIP275_RS01045;Dbxref=GenBank:WP_002208677.1;Name=WP_002208677.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105583.1;locus_tag=YPIP275_RS01045;product=SDR family oxidoreductase;protein_id=WP_002208677.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 217812 217994 . + . ID=gene-YPIP275_RS26625;Name=YPIP275_RS26625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26625 NZ_AAOS02000001.1 Protein Homology CDS 217812 217994 . + 0 ID=cds-WP_002222306.1;Parent=gene-YPIP275_RS26625;Dbxref=GenBank:WP_002222306.1;Name=WP_002222306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002222306.1;locus_tag=YPIP275_RS26625;product=hypothetical protein;protein_id=WP_002222306.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 217991 219820 . - . ID=gene-YPIP275_RS01050;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=YPIP275_RS01050;old_locus_tag=YPIP275_3654 NZ_AAOS02000001.1 Protein Homology CDS 217991 219820 . - 0 ID=cds-WP_002208678.1;Parent=gene-YPIP275_RS01050;Dbxref=GenBank:WP_002208678.1;Name=WP_002208678.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105584.1;locus_tag=YPIP275_RS01050;product=maltodextrin glucosidase;protein_id=WP_002208678.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 220381 221772 . - . ID=gene-YPIP275_RS01055;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=YPIP275_RS01055;old_locus_tag=YPIP275_3655 NZ_AAOS02000001.1 Protein Homology CDS 220381 221772 . - 0 ID=cds-WP_002208679.1;Parent=gene-YPIP275_RS01055;Dbxref=GenBank:WP_002208679.1;Name=WP_002208679.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191856.1;locus_tag=YPIP275_RS01055;product=proline-specific permease ProY;protein_id=WP_002208679.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 221848 223167 . - . ID=gene-YPIP275_RS01060;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=YPIP275_RS01060;old_locus_tag=YPIP275_3656 NZ_AAOS02000001.1 Protein Homology CDS 221848 223167 . - 0 ID=cds-WP_002208680.1;Parent=gene-YPIP275_RS01060;Dbxref=GenBank:WP_002208680.1;Name=WP_002208680.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105586.1;locus_tag=YPIP275_RS01060;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_002208680.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 223641 224705 . - . ID=gene-YPIP275_RS01065;Name=YPIP275_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01065;old_locus_tag=YPIP275_3658 NZ_AAOS02000001.1 Protein Homology CDS 223641 224705 . - 0 ID=cds-WP_002215524.1;Parent=gene-YPIP275_RS01065;Dbxref=GenBank:WP_002215524.1;Name=WP_002215524.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191855.1;locus_tag=YPIP275_RS01065;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_002215524.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 224727 226043 . - . ID=gene-YPIP275_RS01070;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=YPIP275_RS01070;old_locus_tag=YPIP275_3660 NZ_AAOS02000001.1 Protein Homology CDS 224727 226043 . - 0 ID=cds-WP_002208684.1;Parent=gene-YPIP275_RS01070;Dbxref=GenBank:WP_002208684.1;Name=WP_002208684.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082524.1;locus_tag=YPIP275_RS01070;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_002208684.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 226068 226757 . - . ID=gene-YPIP275_RS01075;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=YPIP275_RS01075;old_locus_tag=YPIP275_3661 NZ_AAOS02000001.1 Protein Homology CDS 226068 226757 . - 0 ID=cds-WP_002208685.1;Parent=gene-YPIP275_RS01075;Dbxref=GenBank:WP_002208685.1;Name=WP_002208685.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=YPIP275_RS01075;product=phosphate response regulator transcription factor PhoB;protein_id=WP_002208685.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 227025 228269 . + . ID=gene-YPIP275_RS01085;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=YPIP275_RS01085;old_locus_tag=YPIP275_3663 NZ_AAOS02000001.1 Protein Homology CDS 227025 228269 . + 0 ID=cds-WP_002208687.1;Parent=gene-YPIP275_RS01085;Dbxref=GenBank:WP_002208687.1;Name=WP_002208687.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191854.1;locus_tag=YPIP275_RS01085;product=exonuclease subunit SbcD;protein_id=WP_002208687.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 228266 231973 . + . ID=gene-YPIP275_RS01090;Name=YPIP275_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01090;old_locus_tag=YPIP275_3664 NZ_AAOS02000001.1 Protein Homology CDS 228266 231973 . + 0 ID=cds-WP_002208688.1;Parent=gene-YPIP275_RS01090;Dbxref=GenBank:WP_002208688.1;Name=WP_002208688.1;Ontology_term=GO:0006302,GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;go_process=double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191853.1;locus_tag=YPIP275_RS01090;product=AAA family ATPase;protein_id=WP_002208688.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 231983 232765 . - . ID=gene-YPIP275_RS01095;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS01095;old_locus_tag=YPIP275_3665 NZ_AAOS02000001.1 Protein Homology CDS 231983 232765 . - 0 ID=cds-WP_001317493.1-51;Parent=gene-YPIP275_RS01095;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS01095;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 232762 233784 . - . ID=gene-YPIP275_RS01100;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01100;old_locus_tag=YPIP275_3666 NZ_AAOS02000001.1 Protein Homology CDS 232762 233784 . - 0 ID=cds-WP_000255944.1-45;Parent=gene-YPIP275_RS01100;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS01100;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 234516 235430 . - . ID=gene-YPIP275_RS01105;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=YPIP275_RS01105;old_locus_tag=YPIP275_3668 NZ_AAOS02000001.1 Protein Homology CDS 234516 235430 . - 0 ID=cds-WP_002208690.1;Parent=gene-YPIP275_RS01105;Dbxref=GenBank:WP_002208690.1;Name=WP_002208690.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704442.1;locus_tag=YPIP275_RS01105;product=fructokinase;protein_id=WP_002208690.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 235763 236674 . + . ID=gene-YPIP275_RS01110;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=YPIP275_RS01110;old_locus_tag=YPIP275_3669 NZ_AAOS02000001.1 Protein Homology CDS 235763 236674 . + 0 ID=cds-WP_002208691.1;Parent=gene-YPIP275_RS01110;Dbxref=GenBank:WP_002208691.1;Name=WP_002208691.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005274890.1;locus_tag=YPIP275_RS01110;product=recombination-associated protein RdgC;protein_id=WP_002208691.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 236910 237197 . - . ID=gene-YPIP275_RS01115;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=YPIP275_RS01115;old_locus_tag=YPIP275_3670 NZ_AAOS02000001.1 Protein Homology CDS 236910 237197 . - 0 ID=cds-WP_002208692.1;Parent=gene-YPIP275_RS01115;Dbxref=GenBank:WP_002208692.1;Name=WP_002208692.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005274892.1;locus_tag=YPIP275_RS01115;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_002208692.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 237687 238211 . - . ID=gene-YPIP275_RS01125;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=YPIP275_RS01125;old_locus_tag=YPIP275_3671 NZ_AAOS02000001.1 Protein Homology CDS 237687 238211 . - 0 ID=cds-WP_002208693.1;Parent=gene-YPIP275_RS01125;Dbxref=GenBank:WP_002208693.1;Name=WP_002208693.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208693.1;locus_tag=YPIP275_RS01125;product=shikimate kinase AroL;protein_id=WP_002208693.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 238458 239015 . - . ID=gene-YPIP275_RS01130;Name=YPIP275_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01130;old_locus_tag=YPIP275_3672 NZ_AAOS02000001.1 Protein Homology CDS 238458 239015 . - 0 ID=cds-WP_002208694.1;Parent=gene-YPIP275_RS01130;Dbxref=GenBank:WP_002208694.1;Name=WP_002208694.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191850.1;locus_tag=YPIP275_RS01130;product=class I SAM-dependent methyltransferase;protein_id=WP_002208694.1;transl_table=11 NZ_AAOS02000001.1 RefSeq pseudogene 239745 240308 . - . ID=gene-YPIP275_RS01140;Name=YPIP275_RS01140;end_range=240308,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS01140;old_locus_tag=YPIP275_3674;partial=true;pseudo=true NZ_AAOS02000001.1 Protein Homology CDS 239745 240308 . - 0 ID=cds-YPIP275_RS01140;Parent=gene-YPIP275_RS01140;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008168,GO:1904047;end_range=240308,.;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005189252.1;locus_tag=YPIP275_RS01140;partial=true;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 240512 240766 . - . ID=gene-YPIP275_RS01145;Name=YPIP275_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01145;old_locus_tag=YPIP275_3676 NZ_AAOS02000001.1 Protein Homology CDS 240512 240766 . - 0 ID=cds-WP_002208698.1;Parent=gene-YPIP275_RS01145;Dbxref=GenBank:WP_002208698.1;Name=WP_002208698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208698.1;locus_tag=YPIP275_RS01145;product=hypothetical protein;protein_id=WP_002208698.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 240964 241713 . - . ID=gene-YPIP275_RS01150;Name=YPIP275_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01150;old_locus_tag=YPIP275_3677 NZ_AAOS02000001.1 Protein Homology CDS 240964 241713 . - 0 ID=cds-WP_002264519.1;Parent=gene-YPIP275_RS01150;Dbxref=GenBank:WP_002264519.1;Name=WP_002264519.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105592.1;locus_tag=YPIP275_RS01150;product=flagellar brake protein;protein_id=WP_002264519.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 242050 243303 . - . ID=gene-YPIP275_RS01155;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01155;old_locus_tag=YPIP275_3678 NZ_AAOS02000001.1 Protein Homology CDS 242050 243303 . - 0 ID=cds-WP_173363256.1;Parent=gene-YPIP275_RS01155;Dbxref=GenBank:WP_173363256.1;Name=WP_173363256.1;Ontology_term=GO:0055129,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015376739.1;locus_tag=YPIP275_RS01155;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_173363256.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 243319 244422 . - . ID=gene-YPIP275_RS01160;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=YPIP275_RS01160;old_locus_tag=YPIP275_3679 NZ_AAOS02000001.1 Protein Homology CDS 243319 244422 . - 0 ID=cds-WP_002208701.1;Parent=gene-YPIP275_RS01160;Dbxref=GenBank:WP_002208701.1;Name=WP_002208701.1;Ontology_term=GO:0055129,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006321291.1;locus_tag=YPIP275_RS01160;product=glutamate 5-kinase;protein_id=WP_002208701.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 244599 245000 . - . ID=gene-YPIP275_RS01165;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=YPIP275_RS01165;old_locus_tag=YPIP275_3680 NZ_AAOS02000001.1 Protein Homology CDS 244599 245000 . - 0 ID=cds-WP_002208702.1;Parent=gene-YPIP275_RS01165;Dbxref=GenBank:WP_002208702.1;Name=WP_002208702.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906387.1;locus_tag=YPIP275_RS01165;product=sigma factor-binding protein Crl;protein_id=WP_002208702.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 245060 246307 . - . ID=gene-YPIP275_RS01170;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01170;old_locus_tag=YPIP275_3681 NZ_AAOS02000001.1 Protein Homology CDS 245060 246307 . - 0 ID=cds-WP_002208703.1;Parent=gene-YPIP275_RS01170;Dbxref=GenBank:WP_002208703.1;Name=WP_002208703.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167532.1;locus_tag=YPIP275_RS01170;product=esterase FrsA;protein_id=WP_002208703.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 246434 246892 . - . ID=gene-YPIP275_RS01175;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=YPIP275_RS01175;old_locus_tag=YPIP275_3682 NZ_AAOS02000001.1 Protein Homology CDS 246434 246892 . - 0 ID=cds-WP_002208704.1;Parent=gene-YPIP275_RS01175;Dbxref=GenBank:WP_002208704.1;Name=WP_002208704.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=YPIP275_RS01175;product=xanthine phosphoribosyltransferase;protein_id=WP_002208704.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 247319 247624 . + . ID=gene-YPIP275_RS01180;Name=YPIP275_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01180 NZ_AAOS02000001.1 Protein Homology CDS 247319 247624 . + 0 ID=cds-WP_002216043.1;Parent=gene-YPIP275_RS01180;Dbxref=GenBank:WP_002216043.1;Name=WP_002216043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016584856.1;locus_tag=YPIP275_RS01180;product=phage holin family protein;protein_id=WP_002216043.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 247821 249425 . + . ID=gene-YPIP275_RS01185;Name=YPIP275_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01185;old_locus_tag=YPIP275_3683 NZ_AAOS02000001.1 Protein Homology CDS 247821 249425 . + 0 ID=cds-WP_002208705.1;Parent=gene-YPIP275_RS01185;Dbxref=GenBank:WP_002208705.1;Name=WP_002208705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208705.1;locus_tag=YPIP275_RS01185;product=lytic polysaccharide monooxygenase;protein_id=WP_002208705.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 249885 250796 . - . ID=gene-YPIP275_RS01190;Name=YPIP275_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01190;old_locus_tag=YPIP275_3684 NZ_AAOS02000001.1 Protein Homology CDS 249885 250796 . - 0 ID=cds-WP_002216044.1;Parent=gene-YPIP275_RS01190;Dbxref=GenBank:WP_002216044.1;Name=WP_002216044.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216044.1;locus_tag=YPIP275_RS01190;product=LysR family transcriptional regulator;protein_id=WP_002216044.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 252671 254131 . + . ID=gene-YPIP275_RS01200;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=YPIP275_RS01200;old_locus_tag=YPIP275_3685 NZ_AAOS02000001.1 Protein Homology CDS 252671 254131 . + 0 ID=cds-WP_002208707.1;Parent=gene-YPIP275_RS01200;Dbxref=GenBank:WP_002208707.1;Name=WP_002208707.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208707.1;locus_tag=YPIP275_RS01200;product=beta-Ala-His dipeptidase;protein_id=WP_002208707.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 254245 255303 . - . ID=gene-YPIP275_RS01205;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=YPIP275_RS01205;old_locus_tag=YPIP275_3686 NZ_AAOS02000001.1 Protein Homology CDS 254245 255303 . - 0 ID=cds-WP_002208708.1;Parent=gene-YPIP275_RS01205;Dbxref=GenBank:WP_002208708.1;Name=WP_002208708.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191844.1;locus_tag=YPIP275_RS01205;product=DNA polymerase IV;protein_id=WP_002208708.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 255674 256606 . + . ID=gene-YPIP275_RS01210;Name=YPIP275_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01210;old_locus_tag=YPIP275_3687 NZ_AAOS02000001.1 Protein Homology CDS 255674 256606 . + 0 ID=cds-WP_002264514.1;Parent=gene-YPIP275_RS01210;Dbxref=GenBank:WP_002264514.1;Name=WP_002264514.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264514.1;locus_tag=YPIP275_RS01210;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_002264514.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 256850 257077 . - . ID=gene-YPIP275_RS01215;Name=nqrM;gbkey=Gene;gene=nqrM;gene_biotype=protein_coding;locus_tag=YPIP275_RS01215 NZ_AAOS02000001.1 Protein Homology CDS 256850 257077 . - 0 ID=cds-WP_002214684.1;Parent=gene-YPIP275_RS01215;Dbxref=GenBank:WP_002214684.1;Name=WP_002214684.1;gbkey=CDS;gene=nqrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214684.1;locus_tag=YPIP275_RS01215;product=(Na+)-NQR maturation NqrM;protein_id=WP_002214684.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 257090 258112 . - . ID=gene-YPIP275_RS01220;Name=YPIP275_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01220;old_locus_tag=YPIP275_3688 NZ_AAOS02000001.1 Protein Homology CDS 257090 258112 . - 0 ID=cds-WP_002227821.1;Parent=gene-YPIP275_RS01220;Dbxref=GenBank:WP_002227821.1;Name=WP_002227821.1;Ontology_term=GO:0017013,GO:0016740,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transferase activity|0016740||IEA,metal ion binding|0046872||IEA;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002227821.1;locus_tag=YPIP275_RS01220;product=FAD:protein FMN transferase;protein_id=WP_002227821.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 258153 259376 . - . ID=gene-YPIP275_RS01225;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=YPIP275_RS01225;old_locus_tag=YPIP275_3689 NZ_AAOS02000001.1 Protein Homology CDS 258153 259376 . - 0 ID=cds-WP_002208711.1;Parent=gene-YPIP275_RS01225;Dbxref=GenBank:WP_002208711.1;Name=WP_002208711.1;Ontology_term=GO:0006814,GO:0016655,GO:0051537,GO:0016020;gbkey=CDS;gene=nqrF;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225270.1;locus_tag=YPIP275_RS01225;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=WP_002208711.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 259392 259988 . - . ID=gene-YPIP275_RS01230;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=YPIP275_RS01230;old_locus_tag=YPIP275_3690 NZ_AAOS02000001.1 Protein Homology CDS 259392 259988 . - 0 ID=cds-WP_002208713.1;Parent=gene-YPIP275_RS01230;Dbxref=GenBank:WP_002208713.1;Name=WP_002208713.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225269.1;locus_tag=YPIP275_RS01230;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_002208713.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 259995 260624 . - . ID=gene-YPIP275_RS01235;Name=YPIP275_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01235;old_locus_tag=YPIP275_3691 NZ_AAOS02000001.1 Protein Homology CDS 259995 260624 . - 0 ID=cds-WP_002208714.1;Parent=gene-YPIP275_RS01235;Dbxref=GenBank:WP_002208714.1;Name=WP_002208714.1;Ontology_term=GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323797.1;locus_tag=YPIP275_RS01235;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=WP_002208714.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 260617 261417 . - . ID=gene-YPIP275_RS01240;Name=YPIP275_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01240;old_locus_tag=YPIP275_3692 NZ_AAOS02000001.1 Protein Homology CDS 260617 261417 . - 0 ID=cds-WP_002208715.1;Parent=gene-YPIP275_RS01240;Dbxref=GenBank:WP_002208715.1;Name=WP_002208715.1;Ontology_term=GO:0006814,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191841.1;locus_tag=YPIP275_RS01240;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=WP_002208715.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 261407 262648 . - . ID=gene-YPIP275_RS01245;Name=YPIP275_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01245;old_locus_tag=YPIP275_3693 NZ_AAOS02000001.1 Protein Homology CDS 261407 262648 . - 0 ID=cds-WP_002208716.1;Parent=gene-YPIP275_RS01245;Dbxref=GenBank:WP_002208716.1;Name=WP_002208716.1;Ontology_term=GO:0022904,GO:0055085,GO:0010181,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=respiratory electron transport chain|0022904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704034.1;locus_tag=YPIP275_RS01245;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=WP_002208716.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 262652 263995 . - . ID=gene-YPIP275_RS01250;Name=YPIP275_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01250;old_locus_tag=YPIP275_3694 NZ_AAOS02000001.1 Protein Homology CDS 262652 263995 . - 0 ID=cds-WP_002208717.1;Parent=gene-YPIP275_RS01250;Dbxref=GenBank:WP_002208717.1;Name=WP_002208717.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082505.1;locus_tag=YPIP275_RS01250;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=WP_002208717.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 264097 264276 . + . ID=gene-YPIP275_RS26635;Name=YPIP275_RS26635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26635 NZ_AAOS02000001.1 Protein Homology CDS 264097 264276 . + 0 ID=cds-WP_002214689.1;Parent=gene-YPIP275_RS26635;Dbxref=GenBank:WP_002214689.1;Name=WP_002214689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214689.1;locus_tag=YPIP275_RS26635;product=hypothetical protein;protein_id=WP_002214689.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 264491 265231 . + . ID=gene-YPIP275_RS01255;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01255;old_locus_tag=YPIP275_3696 NZ_AAOS02000001.1 Protein Homology CDS 264491 265231 . + 0 ID=cds-WP_002208718.1;Parent=gene-YPIP275_RS01255;Dbxref=GenBank:WP_002208718.1;Name=WP_002208718.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304521.1;locus_tag=YPIP275_RS01255;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_002208718.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 265196 265969 . - . ID=gene-YPIP275_RS01260;Name=YPIP275_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01260;old_locus_tag=YPIP275_3695 NZ_AAOS02000001.1 Protein Homology CDS 265196 265969 . - 0 ID=cds-WP_002208719.1;Parent=gene-YPIP275_RS01260;Dbxref=GenBank:WP_002208719.1;Name=WP_002208719.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105598.1;locus_tag=YPIP275_RS01260;product=class II glutamine amidotransferase;protein_id=WP_002208719.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 266172 266753 . - . ID=gene-YPIP275_RS01265;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01265;old_locus_tag=YPIP275_3697 NZ_AAOS02000001.1 Protein Homology CDS 266172 266753 . - 0 ID=cds-WP_002208720.1;Parent=gene-YPIP275_RS01265;Dbxref=GenBank:WP_002208720.1;Name=WP_002208720.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010981422.1;locus_tag=YPIP275_RS01265;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_002208720.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 266993 269440 . + . ID=gene-YPIP275_RS01270;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=YPIP275_RS01270;old_locus_tag=YPIP275_3698 NZ_AAOS02000001.1 Protein Homology CDS 266993 269440 . + 0 ID=cds-WP_002214691.1;Parent=gene-YPIP275_RS01270;Dbxref=GenBank:WP_002214691.1;Name=WP_002214691.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191839.1;locus_tag=YPIP275_RS01270;product=acyl-CoA dehydrogenase FadE;protein_id=WP_002214691.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 269612 270358 . - . ID=gene-YPIP275_RS01275;Name=YPIP275_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01275;old_locus_tag=YPIP275_3699 NZ_AAOS02000001.1 Protein Homology CDS 269612 270358 . - 0 ID=cds-WP_002208721.1;Parent=gene-YPIP275_RS01275;Dbxref=GenBank:WP_002208721.1;Name=WP_002208721.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF015301.6;locus_tag=YPIP275_RS01275;product=PapB/FocB family fimbrial expression transcriptional regulator;protein_id=WP_002208721.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 270360 272213 . - . ID=gene-YPIP275_RS01280;Name=YPIP275_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01280;old_locus_tag=YPIP275_3700 NZ_AAOS02000001.1 Protein Homology CDS 270360 272213 . - 0 ID=cds-WP_002208722.1;Parent=gene-YPIP275_RS01280;Dbxref=GenBank:WP_002208722.1;Name=WP_002208722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208722.1;locus_tag=YPIP275_RS01280;product=glycosyl transferase;protein_id=WP_002208722.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 272368 278100 . - . ID=gene-YPIP275_RS01285;Name=YPIP275_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01285;old_locus_tag=YPIP275_3702 NZ_AAOS02000001.1 Protein Homology CDS 272368 278100 . - 0 ID=cds-WP_002208725.1;Parent=gene-YPIP275_RS01285;Dbxref=GenBank:WP_002208725.1;Name=WP_002208725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012413504.1;locus_tag=YPIP275_RS01285;product=two-partner secretion domain-containing protein;protein_id=WP_002208725.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 278141 279931 . - . ID=gene-YPIP275_RS01290;Name=YPIP275_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01290;old_locus_tag=YPIP275_3703 NZ_AAOS02000001.1 Protein Homology CDS 278141 279931 . - 0 ID=cds-WP_002214693.1;Parent=gene-YPIP275_RS01290;Dbxref=GenBank:WP_002214693.1;Name=WP_002214693.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214693.1;locus_tag=YPIP275_RS01290;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_002214693.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 280633 280734 . - . ID=gene-YPIP275_RS26645;Name=YPIP275_RS26645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS26645 NZ_AAOS02000001.1 Protein Homology CDS 280633 280734 . - 0 ID=cds-WP_071525551.1;Parent=gene-YPIP275_RS26645;Dbxref=GenBank:WP_071525551.1;Name=WP_071525551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430096.1;locus_tag=YPIP275_RS26645;product=gluconate 5-dehydrogenase;protein_id=WP_071525551.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 281020 282312 . - . ID=gene-YPIP275_RS01295;Name=YPIP275_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01295;old_locus_tag=YPIP275_3706 NZ_AAOS02000001.1 Protein Homology CDS 281020 282312 . - 0 ID=cds-WP_002208729.1;Parent=gene-YPIP275_RS01295;Dbxref=GenBank:WP_002208729.1;Name=WP_002208729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208729.1;locus_tag=YPIP275_RS01295;product=allantoate amidohydrolase;protein_id=WP_002208729.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 282312 282770 . - . ID=gene-YPIP275_RS01300;Name=YPIP275_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01300;old_locus_tag=YPIP275_3707 NZ_AAOS02000001.1 Protein Homology CDS 282312 282770 . - 0 ID=cds-WP_002208730.1;Parent=gene-YPIP275_RS01300;Dbxref=GenBank:WP_002208730.1;Name=WP_002208730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208730.1;locus_tag=YPIP275_RS01300;product=pyridoxal-phosphate-dependent aminotransferase family protein;protein_id=WP_002208730.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 282840 283862 . + . ID=gene-YPIP275_RS01305;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01305;old_locus_tag=YPIP275_3708 NZ_AAOS02000001.1 Protein Homology CDS 282840 283862 . + 0 ID=cds-WP_000255944.1-46;Parent=gene-YPIP275_RS01305;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=YPIP275_RS01305;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 283859 284641 . + . ID=gene-YPIP275_RS01310;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=YPIP275_RS01310;old_locus_tag=YPIP275_3709 NZ_AAOS02000001.1 Protein Homology CDS 283859 284641 . + 0 ID=cds-WP_001317493.1-52;Parent=gene-YPIP275_RS01310;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=YPIP275_RS01310;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_AAOS02000001.1 RefSeq pseudogene 284707 285615 . - . ID=gene-YPIP275_RS01315;Name=YPIP275_RS01315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YPIP275_RS01315;old_locus_tag=YPIP275_3710;partial=true;pseudo=true;start_range=.,284707 NZ_AAOS02000001.1 Protein Homology CDS 284707 285615 . - 0 ID=cds-YPIP275_RS01315;Parent=gene-YPIP275_RS01315;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649396.1;locus_tag=YPIP275_RS01315;partial=true;product=pyridoxal-phosphate-dependent aminotransferase family protein;pseudo=true;start_range=.,284707;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 285647 286393 . - . ID=gene-YPIP275_RS01320;Name=YPIP275_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01320;old_locus_tag=YPIP275_3711 NZ_AAOS02000001.1 Protein Homology CDS 285647 286393 . - 0 ID=cds-WP_002208732.1;Parent=gene-YPIP275_RS01320;Dbxref=GenBank:WP_002208732.1;Name=WP_002208732.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208732.1;locus_tag=YPIP275_RS01320;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002208732.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 286374 287027 . - . ID=gene-YPIP275_RS01325;Name=YPIP275_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01325;old_locus_tag=YPIP275_3712 NZ_AAOS02000001.1 Protein Homology CDS 286374 287027 . - 0 ID=cds-WP_002208733.1;Parent=gene-YPIP275_RS01325;Dbxref=GenBank:WP_002208733.1;Name=WP_002208733.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208733.1;locus_tag=YPIP275_RS01325;product=amino acid ABC transporter permease;protein_id=WP_002208733.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 287024 287692 . - . ID=gene-YPIP275_RS01330;Name=YPIP275_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01330;old_locus_tag=YPIP275_3713 NZ_AAOS02000001.1 Protein Homology CDS 287024 287692 . - 0 ID=cds-WP_002208734.1;Parent=gene-YPIP275_RS01330;Dbxref=GenBank:WP_002208734.1;Name=WP_002208734.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208734.1;locus_tag=YPIP275_RS01330;product=amino acid ABC transporter permease;protein_id=WP_002208734.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 287705 288493 . - . ID=gene-YPIP275_RS01335;Name=YPIP275_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01335;old_locus_tag=YPIP275_3714 NZ_AAOS02000001.1 Protein Homology CDS 287705 288493 . - 0 ID=cds-WP_002208735.1;Parent=gene-YPIP275_RS01335;Dbxref=GenBank:WP_002208735.1;Name=WP_002208735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229946.1;locus_tag=YPIP275_RS01335;product=transporter substrate-binding domain-containing protein;protein_id=WP_002208735.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 288821 289654 . - . ID=gene-YPIP275_RS01345;Name=YPIP275_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01345;old_locus_tag=YPIP275_3715 NZ_AAOS02000001.1 Protein Homology CDS 288821 289654 . - 0 ID=cds-WP_002208736.1;Parent=gene-YPIP275_RS01345;Dbxref=GenBank:WP_002208736.1;Name=WP_002208736.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208736.1;locus_tag=YPIP275_RS01345;product=MurR/RpiR family transcriptional regulator;protein_id=WP_002208736.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 289964 290167 . + . ID=gene-YPIP275_RS01350;Name=hpxX;gbkey=Gene;gene=hpxX;gene_biotype=protein_coding;locus_tag=YPIP275_RS01350;old_locus_tag=YPIP275_3717 NZ_AAOS02000001.1 Protein Homology CDS 289964 290167 . + 0 ID=cds-WP_002208738.1;Parent=gene-YPIP275_RS01350;Dbxref=GenBank:WP_002208738.1;Name=WP_002208738.1;gbkey=CDS;gene=hpxX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304532.1;locus_tag=YPIP275_RS01350;product=oxalurate catabolism protein HpxX;protein_id=WP_002208738.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 290164 291561 . + . ID=gene-YPIP275_RS01355;Name=YPIP275_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01355;old_locus_tag=YPIP275_3718 NZ_AAOS02000001.1 Protein Homology CDS 290164 291561 . + 0 ID=cds-WP_002208739.1;Parent=gene-YPIP275_RS01355;Dbxref=GenBank:WP_002208739.1;Name=WP_002208739.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208739.1;locus_tag=YPIP275_RS01355;product=AtzE family amidohydrolase;protein_id=WP_002208739.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 291671 292057 . + . ID=gene-YPIP275_RS01360;Name=hpxZ;gbkey=Gene;gene=hpxZ;gene_biotype=protein_coding;locus_tag=YPIP275_RS01360;old_locus_tag=YPIP275_3719 NZ_AAOS02000001.1 Protein Homology CDS 291671 292057 . + 0 ID=cds-WP_002264506.1;Parent=gene-YPIP275_RS01360;Dbxref=GenBank:WP_002264506.1;Name=WP_002264506.1;gbkey=CDS;gene=hpxZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264506.1;locus_tag=YPIP275_RS01360;product=oxalurate catabolism protein HpxZ;protein_id=WP_002264506.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 292285 293484 . + . ID=gene-YPIP275_RS01365;Name=YPIP275_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01365;old_locus_tag=YPIP275_3720 NZ_AAOS02000001.1 Protein Homology CDS 292285 293484 . + 0 ID=cds-WP_002208741.1;Parent=gene-YPIP275_RS01365;Dbxref=GenBank:WP_002208741.1;Name=WP_002208741.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906396.1;locus_tag=YPIP275_RS01365;product=MFS transporter;protein_id=WP_002208741.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 293644 294417 . + . ID=gene-YPIP275_RS01370;Name=YPIP275_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01370;old_locus_tag=YPIP275_3721 NZ_AAOS02000001.1 Protein Homology CDS 293644 294417 . + 0 ID=cds-WP_002208742.1;Parent=gene-YPIP275_RS01370;Dbxref=GenBank:WP_002208742.1;Name=WP_002208742.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004704053.1;locus_tag=YPIP275_RS01370;product=AzlC family ABC transporter permease;protein_id=WP_002208742.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 294414 294755 . + . ID=gene-YPIP275_RS01375;Name=ygaH;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;locus_tag=YPIP275_RS01375;old_locus_tag=YPIP275_3722 NZ_AAOS02000001.1 Protein Homology CDS 294414 294755 . + 0 ID=cds-WP_002208743.1;Parent=gene-YPIP275_RS01375;Dbxref=GenBank:WP_002208743.1;Name=WP_002208743.1;gbkey=CDS;gene=ygaH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208743.1;locus_tag=YPIP275_RS01375;product=L-valine transporter subunit YgaH;protein_id=WP_002208743.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 294927 295439 . + . ID=gene-YPIP275_RS01380;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01380;old_locus_tag=YPIP275_3723 NZ_AAOS02000001.1 Protein Homology CDS 294927 295439 . + 0 ID=cds-WP_002208744.1;Parent=gene-YPIP275_RS01380;Dbxref=GenBank:WP_002208744.1;Name=WP_002208744.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208744.1;locus_tag=YPIP275_RS01380;product=transcriptional repressor MprA;protein_id=WP_002208744.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 295823 296995 . + . ID=gene-YPIP275_RS01385;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01385;old_locus_tag=YPIP275_3724 NZ_AAOS02000001.1 Protein Homology CDS 295823 296995 . + 0 ID=cds-WP_002208745.1;Parent=gene-YPIP275_RS01385;Dbxref=GenBank:WP_002208745.1;Name=WP_002208745.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304533.1;locus_tag=YPIP275_RS01385;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_002208745.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 297034 298569 . + . ID=gene-YPIP275_RS01390;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=YPIP275_RS01390;old_locus_tag=YPIP275_3725 NZ_AAOS02000001.1 Protein Homology CDS 297034 298569 . + 0 ID=cds-WP_002208746.1;Parent=gene-YPIP275_RS01390;Dbxref=GenBank:WP_002208746.1;Name=WP_002208746.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=emrB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208746.1;locus_tag=YPIP275_RS01390;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_002208746.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 298692 299858 . - . ID=gene-YPIP275_RS01395;Name=YPIP275_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01395;old_locus_tag=YPIP275_3726 NZ_AAOS02000001.1 Protein Homology CDS 298692 299858 . - 0 ID=cds-WP_002208747.1;Parent=gene-YPIP275_RS01395;Dbxref=GenBank:WP_002208747.1;Name=WP_002208747.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229947.1;locus_tag=YPIP275_RS01395;product=tRNA/rRNA methyltransferase;protein_id=WP_002208747.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 300110 300547 . + . ID=gene-YPIP275_RS01400;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=YPIP275_RS01400;old_locus_tag=YPIP275_3727 NZ_AAOS02000001.1 Protein Homology CDS 300110 300547 . + 0 ID=cds-WP_002216643.1;Parent=gene-YPIP275_RS01400;Dbxref=GenBank:WP_002216643.1;Name=WP_002216643.1;Ontology_term=GO:0045454,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216643.1;locus_tag=YPIP275_RS01400;product=thioredoxin TrxC;protein_id=WP_002216643.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 300717 301466 . + . ID=gene-YPIP275_RS01405;Name=YPIP275_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01405;old_locus_tag=YPIP275_3728 NZ_AAOS02000001.1 Protein Homology CDS 300717 301466 . + 0 ID=cds-WP_002208749.1;Parent=gene-YPIP275_RS01405;Dbxref=GenBank:WP_002208749.1;Name=WP_002208749.1;Ontology_term=GO:0006400,GO:0016432;gbkey=CDS;go_function=tRNA-uridine aminocarboxypropyltransferase activity|0016432||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191816.1;locus_tag=YPIP275_RS01405;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_002208749.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 301509 304151 . + . ID=gene-YPIP275_RS01410;Name=YPIP275_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01410;old_locus_tag=YPIP275_3729 NZ_AAOS02000001.1 Protein Homology CDS 301509 304151 . + 0 ID=cds-WP_002208750.1;Parent=gene-YPIP275_RS01410;Dbxref=GenBank:WP_002208750.1;Name=WP_002208750.1;Ontology_term=GO:0046356,GO:0003985,GO:0005524,GO:0008080,GO:0043758;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA,ATP binding|0005524||IEA,N-acetyltransferase activity|0008080||IEA,acetate-CoA ligase (ADP-forming) activity|0043758||IEA;go_process=acetyl-CoA catabolic process|0046356||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166481.1;locus_tag=YPIP275_RS01410;product=bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase;protein_id=WP_002208750.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 304330 305682 . + . ID=gene-YPIP275_RS01415;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=YPIP275_RS01415;old_locus_tag=YPIP275_3730 NZ_AAOS02000001.1 Protein Homology CDS 304330 305682 . + 0 ID=cds-WP_370696107.1;Parent=gene-YPIP275_RS01415;Dbxref=GenBank:WP_370696107.1;Name=WP_370696107.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208751.1;locus_tag=YPIP275_RS01415;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_370696107.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 305744 306085 . + . ID=gene-YPIP275_RS01420;Name=YPIP275_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YPIP275_RS01420;old_locus_tag=YPIP275_3732 NZ_AAOS02000001.1 Protein Homology CDS 305744 306085 . + 0 ID=cds-WP_002208752.1;Parent=gene-YPIP275_RS01420;Dbxref=GenBank:WP_002208752.1;Name=WP_002208752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304536.1;locus_tag=YPIP275_RS01420;product=YfiM family lipoprotein;protein_id=WP_002208752.1;transl_table=11 NZ_AAOS02000001.1 RefSeq gene 306473 306588 . - . ID=gene-YPIP275_RS01430;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=YPIP275_RS01430;old_locus_tag=YPIP275_3733 NZ_AAOS02000001.1 cmsearch rRNA 306473 306588 . - . ID=rna-YPIP275_RS01430;Parent=gene-YPIP275_RS01430;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS01430;product=5S ribosomal RNA NZ_AAOS02000001.1 cmsearch exon 306473 306588 . - . ID=exon-YPIP275_RS01430-1;Parent=rna-YPIP275_RS01430;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS01430;product=5S ribosomal RNA NZ_AAOS02000001.1 RefSeq gene 306698 309604 . - . ID=gene-YPIP275_RS01435;Name=YPIP275_RS01435;gbkey=Gene;gene_biotype=rRNA;locus_tag=YPIP275_RS01435;old_locus_tag=YPIP275_3734 NZ_AAOS02000001.1 cmsearch rRNA 306698 309604 . - . ID=rna-YPIP275_RS01435;Parent=gene-YPIP275_RS01435;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS01435;product=23S ribosomal RNA NZ_AAOS02000001.1 cmsearch exon 306698 309604 . - . ID=exon-YPIP275_RS01435-1;Parent=rna-YPIP275_RS01435;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=YPIP275_RS01435;product=23S ribosomal RNA ###