##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM18021v1
#!genome-build-accession NCBI_Assembly:GCF_000180215.1
#!annotation-date 08/13/2019 00:29:27
#!annotation-source NCBI RefSeq 
##sequence-region NZ_CAAR01001445.1 1 128
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001445.1	RefSeq	region	1	128	.	+	.	ID=NZ_CAAR01001445.1:1..128;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001444.1 1 4141
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001444.1	RefSeq	region	1	4141	.	+	.	ID=NZ_CAAR01001444.1:1..4141;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001444.1	RefSeq	gene	40	288	.	-	.	ID=gene-STY7866_RS26305;Name=STY7866_RS26305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26305
NZ_CAAR01001444.1	Protein Homology	CDS	40	288	.	-	0	ID=cds-WP_000512149.1;Parent=gene-STY7866_RS26305;Dbxref=Genbank:WP_000512149.1;Name=WP_000512149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456236.1;locus_tag=STY7866_RS26305;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512149.1;transl_table=11
NZ_CAAR01001444.1	RefSeq	gene	296	481	.	-	.	ID=gene-STY7866_RS26310;Name=STY7866_RS26310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26310
NZ_CAAR01001444.1	Protein Homology	CDS	296	481	.	-	0	ID=cds-WP_001527866.1;Parent=gene-STY7866_RS26310;Dbxref=Genbank:WP_001527866.1;Name=WP_001527866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012512826.1;locus_tag=STY7866_RS26310;product=hypothetical protein;protein_id=WP_001527866.1;transl_table=11
NZ_CAAR01001444.1	RefSeq	gene	602	1249	.	-	.	ID=gene-STY7866_RS26315;Name=STY7866_RS26315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26315
NZ_CAAR01001444.1	Protein Homology	CDS	602	1249	.	-	0	ID=cds-WP_000605466.1;Parent=gene-STY7866_RS26315;Dbxref=Genbank:WP_000605466.1;Name=WP_000605466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456238.1;locus_tag=STY7866_RS26315;product=hypothetical protein;protein_id=WP_000605466.1;transl_table=11
NZ_CAAR01001444.1	RefSeq	gene	1473	1655	.	-	.	ID=gene-STY7866_RS26320;Name=STY7866_RS26320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26320
NZ_CAAR01001444.1	Protein Homology	CDS	1473	1655	.	-	0	ID=cds-WP_000513734.1;Parent=gene-STY7866_RS26320;Dbxref=Genbank:WP_000513734.1;Name=WP_000513734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456239.1;locus_tag=STY7866_RS26320;product=DUF1869 domain-containing protein;protein_id=WP_000513734.1;transl_table=11
NZ_CAAR01001444.1	RefSeq	gene	1658	2020	.	-	.	ID=gene-STY7866_RS26325;Name=STY7866_RS26325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26325
NZ_CAAR01001444.1	Protein Homology	CDS	1658	2020	.	-	0	ID=cds-WP_001248993.1;Parent=gene-STY7866_RS26325;Dbxref=Genbank:WP_001248993.1;Name=WP_001248993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456240.1;locus_tag=STY7866_RS26325;product=DUF1971 domain-containing protein;protein_id=WP_001248993.1;transl_table=11
NZ_CAAR01001444.1	RefSeq	gene	2193	2831	.	-	.	ID=gene-STY7866_RS26330;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=STY7866_RS26330
NZ_CAAR01001444.1	Protein Homology	CDS	2193	2831	.	-	0	ID=cds-WP_000457190.1;Parent=gene-STY7866_RS26330;Dbxref=Genbank:WP_000457190.1;Name=WP_000457190.1;gbkey=CDS;gene=leuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456241.1;locus_tag=STY7866_RS26330;product=leucine efflux protein LeuE;protein_id=WP_000457190.1;transl_table=11
NZ_CAAR01001444.1	RefSeq	gene	3027	3572	.	-	.	ID=gene-STY7866_RS26335;Name=STY7866_RS26335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26335
NZ_CAAR01001444.1	Protein Homology	CDS	3027	3572	.	-	0	ID=cds-WP_000617989.1;Parent=gene-STY7866_RS26335;Dbxref=Genbank:WP_000617989.1;Name=WP_000617989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456242.1;locus_tag=STY7866_RS26335;product=chorismate mutase;protein_id=WP_000617989.1;transl_table=11
NZ_CAAR01001444.1	RefSeq	gene	3655	3810	.	+	.	ID=gene-STY7866_RS26340;Name=STY7866_RS26340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26340
NZ_CAAR01001444.1	Protein Homology	CDS	3655	3810	.	+	0	ID=cds-WP_000908466.1;Parent=gene-STY7866_RS26340;Dbxref=Genbank:WP_000908466.1;Name=WP_000908466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=STY7866_RS26340;product=hypothetical protein;protein_id=WP_000908466.1;transl_table=11
NZ_CAAR01001444.1	RefSeq	gene	3889	4137	.	+	.	ID=gene-STY7866_RS26345;Name=STY7866_RS26345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26345
NZ_CAAR01001444.1	Protein Homology	CDS	3889	4137	.	+	0	ID=cds-WP_000208085.1;Parent=gene-STY7866_RS26345;Dbxref=Genbank:WP_000208085.1;Name=WP_000208085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456244.1;locus_tag=STY7866_RS26345;product=hypothetical protein;protein_id=WP_000208085.1;transl_table=11
##sequence-region NZ_CAAR01001443.1 1 229
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001443.1	RefSeq	region	1	229	.	+	.	ID=NZ_CAAR01001443.1:1..229;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001443.1	RefSeq	gene	1	229	.	+	.	ID=gene-STY7866_RS26300;Name=tnpA;end_range=229,.;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=STY7866_RS26300;partial=true;start_range=.,1
NZ_CAAR01001443.1	Protein Homology	CDS	1	229	.	+	1	ID=cds-WP_000297693.1;Parent=gene-STY7866_RS26300;Dbxref=Genbank:WP_000297693.1;Name=WP_000297693.1;end_range=229,.;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457895.1;locus_tag=STY7866_RS26300;partial=true;product=IS200/IS605 family transposase;protein_id=WP_000297693.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001442.1 1 215
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001442.1	RefSeq	region	1	215	.	+	.	ID=NZ_CAAR01001442.1:1..215;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001442.1	RefSeq	pseudogene	1	63	.	-	.	ID=gene-STY7866_RS29865;Name=STY7866_RS29865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29865;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001442.1	Protein Homology	CDS	1	63	.	-	0	ID=cds-STY7866_RS29865;Parent=gene-STY7866_RS29865;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454840.1;locus_tag=STY7866_RS29865;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001441.1 1 5220
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001441.1	RefSeq	region	1	5220	.	+	.	ID=NZ_CAAR01001441.1:1..5220;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001441.1	RefSeq	gene	121	576	.	+	.	ID=gene-STY7866_RS26265;Name=STY7866_RS26265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26265
NZ_CAAR01001441.1	Protein Homology	CDS	121	576	.	+	0	ID=cds-WP_000985648.1;Parent=gene-STY7866_RS26265;Dbxref=Genbank:WP_000985648.1;Name=WP_000985648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457130.1;locus_tag=STY7866_RS26265;product=DUF4385 domain-containing protein;protein_id=WP_000985648.1;transl_table=11
NZ_CAAR01001441.1	RefSeq	gene	680	1981	.	+	.	ID=gene-STY7866_RS26270;Name=STY7866_RS26270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26270
NZ_CAAR01001441.1	Protein Homology	CDS	680	1981	.	+	0	ID=cds-WP_000807800.1;Parent=gene-STY7866_RS26270;Dbxref=Genbank:WP_000807800.1;Name=WP_000807800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457129.1;locus_tag=STY7866_RS26270;product=MFS transporter;protein_id=WP_000807800.1;transl_table=11
NZ_CAAR01001441.1	RefSeq	gene	1978	2301	.	-	.	ID=gene-STY7866_RS26275;Name=STY7866_RS26275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26275
NZ_CAAR01001441.1	Protein Homology	CDS	1978	2301	.	-	0	ID=cds-WP_001264473.1;Parent=gene-STY7866_RS26275;Dbxref=Genbank:WP_001264473.1;Name=WP_001264473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457128.1;locus_tag=STY7866_RS26275;product=YfiM family lipoprotein;protein_id=WP_001264473.1;transl_table=11
NZ_CAAR01001441.1	RefSeq	gene	2346	3701	.	-	.	ID=gene-STY7866_RS26280;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=STY7866_RS26280
NZ_CAAR01001441.1	Protein Homology	CDS	2346	3701	.	-	0	ID=cds-WP_000949286.1;Parent=gene-STY7866_RS26280;Dbxref=Genbank:WP_000949286.1;Name=WP_000949286.1;gbkey=CDS;gene=pssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=STY7866_RS26280;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949286.1;transl_table=11
NZ_CAAR01001441.1	RefSeq	pseudogene	3816	5220	.	-	.	ID=gene-STY7866_RS26285;Name=pat;end_range=5220,.;gbkey=Gene;gene=pat;gene_biotype=pseudogene;locus_tag=STY7866_RS26285;partial=true;pseudo=true
NZ_CAAR01001441.1	Protein Homology	CDS	3816	5220	.	-	1	ID=cds-STY7866_RS26285;Parent=gene-STY7866_RS26285;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5220,.;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457126.1;locus_tag=STY7866_RS26285;partial=true;product=protein lysine acetyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001440.1 1 5422
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001440.1	RefSeq	region	1	5422	.	+	.	ID=NZ_CAAR01001440.1:1..5422;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001440.1	RefSeq	gene	229	612	.	+	.	ID=gene-STY7866_RS26230;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=STY7866_RS26230
NZ_CAAR01001440.1	Protein Homology	CDS	229	612	.	+	0	ID=cds-WP_001275691.1;Parent=gene-STY7866_RS26230;Dbxref=Genbank:WP_001275691.1;Name=WP_001275691.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=STY7866_RS26230;product=preprotein translocase subunit SecE;protein_id=WP_001275691.1;transl_table=11
NZ_CAAR01001440.1	RefSeq	gene	614	1159	.	+	.	ID=gene-STY7866_RS26235;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=STY7866_RS26235
NZ_CAAR01001440.1	Protein Homology	CDS	614	1159	.	+	0	ID=cds-WP_001287521.1;Parent=gene-STY7866_RS26235;Dbxref=Genbank:WP_001287521.1;Name=WP_001287521.1;gbkey=CDS;gene=nusG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=STY7866_RS26235;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11
NZ_CAAR01001440.1	RefSeq	gene	1317	1745	.	+	.	ID=gene-STY7866_RS26240;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=STY7866_RS26240
NZ_CAAR01001440.1	Protein Homology	CDS	1317	1745	.	+	0	ID=cds-WP_001085926.1;Parent=gene-STY7866_RS26240;Dbxref=Genbank:WP_001085926.1;Name=WP_001085926.1;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=STY7866_RS26240;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11
NZ_CAAR01001440.1	RefSeq	gene	1749	2453	.	+	.	ID=gene-STY7866_RS26245;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=STY7866_RS26245
NZ_CAAR01001440.1	Protein Homology	CDS	1749	2453	.	+	0	ID=cds-WP_001096677.1;Parent=gene-STY7866_RS26245;Dbxref=Genbank:WP_001096677.1;Name=WP_001096677.1;gbkey=CDS;gene=rplA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004387081.1;locus_tag=STY7866_RS26245;product=50S ribosomal protein L1;protein_id=WP_001096677.1;transl_table=11
NZ_CAAR01001440.1	RefSeq	gene	2869	3366	.	+	.	ID=gene-STY7866_RS26250;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=STY7866_RS26250
NZ_CAAR01001440.1	Protein Homology	CDS	2869	3366	.	+	0	ID=cds-WP_001207203.1;Parent=gene-STY7866_RS26250;Dbxref=Genbank:WP_001207203.1;Name=WP_001207203.1;gbkey=CDS;gene=rplJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=STY7866_RS26250;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11
NZ_CAAR01001440.1	RefSeq	gene	3433	3798	.	+	.	ID=gene-STY7866_RS26255;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=STY7866_RS26255
NZ_CAAR01001440.1	Protein Homology	CDS	3433	3798	.	+	0	ID=cds-WP_000028882.1;Parent=gene-STY7866_RS26255;Dbxref=Genbank:WP_000028882.1;Name=WP_000028882.1;gbkey=CDS;gene=rplL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=STY7866_RS26255;product=50S ribosomal protein L7/L12;protein_id=WP_000028882.1;transl_table=11
NZ_CAAR01001440.1	RefSeq	pseudogene	4116	5422	.	+	.	ID=gene-STY7866_RS26260;Name=STY7866_RS26260;end_range=5422,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26260;partial=true;pseudo=true
NZ_CAAR01001440.1	Protein Homology	CDS	4116	5422	.	+	0	ID=cds-STY7866_RS26260;Parent=gene-STY7866_RS26260;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5422,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457917.1;locus_tag=STY7866_RS26260;partial=true;product=DNA-directed RNA polymerase subunit beta;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001439.1 1 1537
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001439.1	RefSeq	region	1	1537	.	+	.	ID=NZ_CAAR01001439.1:1..1537;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001439.1	RefSeq	gene	183	377	.	+	.	ID=gene-STY7866_RS26215;Name=STY7866_RS26215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26215
NZ_CAAR01001439.1	Protein Homology	CDS	183	377	.	+	0	ID=cds-WP_000289082.1;Parent=gene-STY7866_RS26215;Dbxref=Genbank:WP_000289082.1;Name=WP_000289082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458456.1;locus_tag=STY7866_RS26215;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289082.1;transl_table=11
NZ_CAAR01001439.1	RefSeq	gene	449	925	.	+	.	ID=gene-STY7866_RS26220;Name=STY7866_RS26220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26220
NZ_CAAR01001439.1	Protein Homology	CDS	449	925	.	+	0	ID=cds-WP_000675528.1;Parent=gene-STY7866_RS26220;Dbxref=Genbank:WP_000675528.1;Name=WP_000675528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458457.1;locus_tag=STY7866_RS26220;product=bacterioferritin;protein_id=WP_000675528.1;transl_table=11
NZ_CAAR01001439.1	RefSeq	gene	922	1389	.	-	.	ID=gene-STY7866_RS26225;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=STY7866_RS26225
NZ_CAAR01001439.1	Protein Homology	CDS	922	1389	.	-	0	ID=cds-WP_000495849.1;Parent=gene-STY7866_RS26225;Dbxref=Genbank:WP_000495849.1;Name=WP_000495849.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458458.1;locus_tag=STY7866_RS26225;product=prepilin peptidase;protein_id=WP_000495849.1;transl_table=11
##sequence-region NZ_CAAR01001438.1 1 15770
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001438.1	RefSeq	region	1	15770	.	+	.	ID=NZ_CAAR01001438.1:1..15770;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001438.1	RefSeq	pseudogene	158	1724	.	-	.	ID=gene-STY7866_RS26140;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=pseudogene;locus_tag=STY7866_RS26140;pseudo=true
NZ_CAAR01001438.1	Protein Homology	CDS	158	1724	.	-	0	ID=cds-STY7866_RS26140;Parent=gene-STY7866_RS26140;Note=frameshifted;gbkey=CDS;gene=ahpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455185.1;locus_tag=STY7866_RS26140;product=alkyl hydroperoxide reductase subunit F;pseudo=true;transl_table=11
NZ_CAAR01001438.1	RefSeq	gene	1966	2529	.	-	.	ID=gene-STY7866_RS26145;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=STY7866_RS26145
NZ_CAAR01001438.1	Protein Homology	CDS	1966	2529	.	-	0	ID=cds-WP_000052802.1;Parent=gene-STY7866_RS26145;Dbxref=Genbank:WP_000052802.1;Name=WP_000052802.1;gbkey=CDS;gene=ahpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=STY7866_RS26145;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052802.1;transl_table=11
NZ_CAAR01001438.1	RefSeq	gene	2969	3715	.	+	.	ID=gene-STY7866_RS26150;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=STY7866_RS26150
NZ_CAAR01001438.1	Protein Homology	CDS	2969	3715	.	+	0	ID=cds-WP_000597117.1;Parent=gene-STY7866_RS26150;Dbxref=Genbank:WP_000597117.1;Name=WP_000597117.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455183.1;locus_tag=STY7866_RS26150;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000597117.1;transl_table=11
NZ_CAAR01001438.1	RefSeq	gene	4032	4934	.	+	.	ID=gene-STY7866_RS26155;Name=STY7866_RS26155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26155
NZ_CAAR01001438.1	Protein Homology	CDS	4032	4934	.	+	0	ID=cds-WP_000002489.1;Parent=gene-STY7866_RS26155;Dbxref=Genbank:WP_000002489.1;Name=WP_000002489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455182.1;locus_tag=STY7866_RS26155;product=LysR family transcriptional regulator;protein_id=WP_000002489.1;transl_table=11
NZ_CAAR01001438.1	RefSeq	gene	5100	6335	.	+	.	ID=gene-STY7866_RS26160;Name=STY7866_RS26160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26160
NZ_CAAR01001438.1	Protein Homology	CDS	5100	6335	.	+	0	ID=cds-WP_000118148.1;Parent=gene-STY7866_RS26160;Dbxref=Genbank:WP_000118148.1;Name=WP_000118148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455181.1;locus_tag=STY7866_RS26160;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000118148.1;transl_table=11
NZ_CAAR01001438.1	RefSeq	gene	6308	6925	.	+	.	ID=gene-STY7866_RS26165;Name=STY7866_RS26165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26165
NZ_CAAR01001438.1	Protein Homology	CDS	6308	6925	.	+	0	ID=cds-WP_001164761.1;Parent=gene-STY7866_RS26165;Dbxref=Genbank:WP_001164761.1;Name=WP_001164761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455180.1;locus_tag=STY7866_RS26165;product=ParB-like nuclease domain-containing protein;protein_id=WP_001164761.1;transl_table=11
NZ_CAAR01001438.1	RefSeq	gene	6926	8086	.	-	.	ID=gene-STY7866_RS26170;Name=STY7866_RS26170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26170
NZ_CAAR01001438.1	Protein Homology	CDS	6926	8086	.	-	0	ID=cds-WP_001245604.1;Parent=gene-STY7866_RS26170;Dbxref=Genbank:WP_001245604.1;Name=WP_001245604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455179.1;locus_tag=STY7866_RS26170;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_001245604.1;transl_table=11
NZ_CAAR01001438.1	RefSeq	gene	8213	9301	.	+	.	ID=gene-STY7866_RS26175;Name=STY7866_RS26175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26175
NZ_CAAR01001438.1	Protein Homology	CDS	8213	9301	.	+	0	ID=cds-WP_001016858.1;Parent=gene-STY7866_RS26175;Dbxref=Genbank:WP_001016858.1;Name=WP_001016858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455178.1;locus_tag=STY7866_RS26175;product=oxidoreductase;protein_id=WP_001016858.1;transl_table=11
NZ_CAAR01001438.1	RefSeq	gene	9337	9534	.	-	.	ID=gene-STY7866_RS26180;Name=STY7866_RS26180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26180
NZ_CAAR01001438.1	Protein Homology	CDS	9337	9534	.	-	0	ID=cds-WP_000460619.1;Parent=gene-STY7866_RS26180;Dbxref=Genbank:WP_000460619.1;Name=WP_000460619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=STY7866_RS26180;product=YbdD/YjiX family protein;protein_id=WP_000460619.1;transl_table=11
NZ_CAAR01001438.1	RefSeq	gene	9598	11703	.	-	.	ID=gene-STY7866_RS26185;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=STY7866_RS26185
NZ_CAAR01001438.1	Protein Homology	CDS	9598	11703	.	-	0	ID=cds-WP_001043112.1;Parent=gene-STY7866_RS26185;Dbxref=Genbank:WP_001043112.1;Name=WP_001043112.1;gbkey=CDS;gene=cstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455176.1;locus_tag=STY7866_RS26185;product=carbon starvation protein CstA;protein_id=WP_001043112.1;transl_table=11
NZ_CAAR01001438.1	RefSeq	gene	11885	12298	.	-	.	ID=gene-STY7866_RS26190;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=STY7866_RS26190
NZ_CAAR01001438.1	Protein Homology	CDS	11885	12298	.	-	0	ID=cds-WP_000637966.1;Parent=gene-STY7866_RS26190;Dbxref=Genbank:WP_000637966.1;Name=WP_000637966.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455175.1;locus_tag=STY7866_RS26190;product=proofreading thioesterase EntH;protein_id=WP_000637966.1;transl_table=11
NZ_CAAR01001438.1	RefSeq	gene	12301	13056	.	-	.	ID=gene-STY7866_RS26195;Name=dhbA;gbkey=Gene;gene=dhbA;gene_biotype=protein_coding;locus_tag=STY7866_RS26195
NZ_CAAR01001438.1	Protein Homology	CDS	12301	13056	.	-	0	ID=cds-WP_000135725.1;Parent=gene-STY7866_RS26195;Dbxref=Genbank:WP_000135725.1;Name=WP_000135725.1;gbkey=CDS;gene=dhbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455174.1;locus_tag=STY7866_RS26195;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase;protein_id=WP_000135725.1;transl_table=11
NZ_CAAR01001438.1	RefSeq	gene	13056	13913	.	-	.	ID=gene-STY7866_RS26200;Name=STY7866_RS26200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26200
NZ_CAAR01001438.1	Protein Homology	CDS	13056	13913	.	-	0	ID=cds-WP_001007162.1;Parent=gene-STY7866_RS26200;Dbxref=Genbank:WP_001007162.1;Name=WP_001007162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455173.1;locus_tag=STY7866_RS26200;product=isochorismatase;protein_id=WP_001007162.1;transl_table=11
NZ_CAAR01001438.1	RefSeq	gene	13927	15537	.	-	.	ID=gene-STY7866_RS26205;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=STY7866_RS26205
NZ_CAAR01001438.1	Protein Homology	CDS	13927	15537	.	-	0	ID=cds-WP_001222444.1;Parent=gene-STY7866_RS26205;Dbxref=Genbank:WP_001222444.1;Name=WP_001222444.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=STY7866_RS26205;product=(2%2C3-dihydroxybenzoyl)adenylate synthase;protein_id=WP_001222444.1;transl_table=11
NZ_CAAR01001438.1	RefSeq	pseudogene	15547	15770	.	-	.	ID=gene-STY7866_RS26210;Name=STY7866_RS26210;end_range=15770,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26210;partial=true;pseudo=true
NZ_CAAR01001438.1	Protein Homology	CDS	15547	15770	.	-	2	ID=cds-STY7866_RS26210;Parent=gene-STY7866_RS26210;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=15770,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=STY7866_RS26210;partial=true;product=isochorismate synthase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001437.1 1 20375
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001437.1	RefSeq	region	1	20375	.	+	.	ID=NZ_CAAR01001437.1:1..20375;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001437.1	RefSeq	gene	37	552	.	-	.	ID=gene-STY7866_RS26035;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=STY7866_RS26035
NZ_CAAR01001437.1	Protein Homology	CDS	37	552	.	-	0	ID=cds-WP_000716763.1;Parent=gene-STY7866_RS26035;Dbxref=Genbank:WP_000716763.1;Name=WP_000716763.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455368.1;locus_tag=STY7866_RS26035;product=outer membrane protein OmpX;protein_id=WP_000716763.1;transl_table=11
NZ_CAAR01001437.1	RefSeq	gene	907	1794	.	+	.	ID=gene-STY7866_RS26040;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=STY7866_RS26040
NZ_CAAR01001437.1	Protein Homology	CDS	907	1794	.	+	0	ID=cds-WP_001119557.1;Parent=gene-STY7866_RS26040;Dbxref=Genbank:WP_001119557.1;Name=WP_001119557.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=STY7866_RS26040;product=threonine/homoserine exporter RhtA;protein_id=WP_001119557.1;transl_table=11
NZ_CAAR01001437.1	RefSeq	gene	2097	2600	.	+	.	ID=gene-STY7866_RS26045;Name=STY7866_RS26045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26045
NZ_CAAR01001437.1	Protein Homology	CDS	2097	2600	.	+	0	ID=cds-WP_000100805.1;Parent=gene-STY7866_RS26045;Dbxref=Genbank:WP_000100805.1;Name=WP_000100805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455366.1;locus_tag=STY7866_RS26045;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100805.1;transl_table=11
NZ_CAAR01001437.1	RefSeq	gene	3077	3823	.	+	.	ID=gene-STY7866_RS26055;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=STY7866_RS26055
NZ_CAAR01001437.1	Protein Homology	CDS	3077	3823	.	+	0	ID=cds-WP_000838671.1;Parent=gene-STY7866_RS26055;Dbxref=Genbank:WP_000838671.1;Name=WP_000838671.1;gbkey=CDS;gene=glnH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=STY7866_RS26055;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000838671.1;transl_table=11
NZ_CAAR01001437.1	RefSeq	gene	3969	4628	.	+	.	ID=gene-STY7866_RS26060;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=STY7866_RS26060
NZ_CAAR01001437.1	Protein Homology	CDS	3969	4628	.	+	0	ID=cds-WP_001159076.1;Parent=gene-STY7866_RS26060;Dbxref=Genbank:WP_001159076.1;Name=WP_001159076.1;gbkey=CDS;gene=glnP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=STY7866_RS26060;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159076.1;transl_table=11
NZ_CAAR01001437.1	RefSeq	gene	4625	5347	.	+	.	ID=gene-STY7866_RS26065;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=STY7866_RS26065
NZ_CAAR01001437.1	Protein Homology	CDS	4625	5347	.	+	0	ID=cds-WP_000569093.1;Parent=gene-STY7866_RS26065;Dbxref=Genbank:WP_000569093.1;Name=WP_000569093.1;gbkey=CDS;gene=glnQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=STY7866_RS26065;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569093.1;transl_table=11
NZ_CAAR01001437.1	RefSeq	pseudogene	5466	7687	.	+	.	ID=gene-STY7866_RS26075;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=pseudogene;locus_tag=STY7866_RS26075;pseudo=true
NZ_CAAR01001437.1	Protein Homology	CDS	5466	7687	.	+	0	ID=cds-STY7866_RS26075;Parent=gene-STY7866_RS26075;Note=frameshifted;gbkey=CDS;gene=ybiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455362.1;locus_tag=STY7866_RS26075;product=mechanosensitive channel protein;pseudo=true;transl_table=11
NZ_CAAR01001437.1	RefSeq	gene	7684	8604	.	-	.	ID=gene-STY7866_RS26080;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=STY7866_RS26080
NZ_CAAR01001437.1	Protein Homology	CDS	7684	8604	.	-	0	ID=cds-WP_001275955.1;Parent=gene-STY7866_RS26080;Dbxref=Genbank:WP_001275955.1;Name=WP_001275955.1;gbkey=CDS;gene=rlmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=STY7866_RS26080;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001275955.1;transl_table=11
NZ_CAAR01001437.1	RefSeq	gene	8809	9075	.	+	.	ID=gene-STY7866_RS26085;Name=STY7866_RS26085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26085
NZ_CAAR01001437.1	Protein Homology	CDS	8809	9075	.	+	0	ID=cds-WP_000146332.1;Parent=gene-STY7866_RS26085;Dbxref=Genbank:WP_000146332.1;Name=WP_000146332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455361.1;locus_tag=STY7866_RS26085;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_000146332.1;transl_table=11
NZ_CAAR01001437.1	RefSeq	gene	9360	9620	.	+	.	ID=gene-STY7866_RS26095;Name=STY7866_RS26095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26095
NZ_CAAR01001437.1	Protein Homology	CDS	9360	9620	.	+	0	ID=cds-WP_000849089.1;Parent=gene-STY7866_RS26095;Dbxref=Genbank:WP_000849089.1;Name=WP_000849089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455359.1;locus_tag=STY7866_RS26095;product=DUF1471 domain-containing protein;protein_id=WP_000849089.1;transl_table=11
NZ_CAAR01001437.1	RefSeq	pseudogene	9776	10750	.	-	.	ID=gene-STY7866_RS26100;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=pseudogene;locus_tag=STY7866_RS26100;pseudo=true
NZ_CAAR01001437.1	Protein Homology	CDS	9776	10750	.	-	0	ID=cds-STY7866_RS26100;Parent=gene-STY7866_RS26100;Note=internal stop;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=STY7866_RS26100;product=DNA-binding protein YbiB;pseudo=true;transl_table=11
NZ_CAAR01001437.1	RefSeq	pseudogene	10780	12923	.	-	.	ID=gene-STY7866_RS26105;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=pseudogene;locus_tag=STY7866_RS26105;pseudo=true
NZ_CAAR01001437.1	Protein Homology	CDS	10780	12923	.	-	0	ID=cds-STY7866_RS26105;Parent=gene-STY7866_RS26105;Note=frameshifted%3B internal stop;gbkey=CDS;gene=dinG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=STY7866_RS26105;product=ATP-dependent DNA helicase DinG;pseudo=true;transl_table=11
NZ_CAAR01001437.1	RefSeq	gene	13131	14498	.	-	.	ID=gene-STY7866_RS26110;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=STY7866_RS26110
NZ_CAAR01001437.1	Protein Homology	CDS	13131	14498	.	-	0	ID=cds-WP_000007058.1;Parent=gene-STY7866_RS26110;Dbxref=Genbank:WP_000007058.1;Name=WP_000007058.1;gbkey=CDS;gene=rhlE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455358.1;locus_tag=STY7866_RS26110;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007058.1;transl_table=11
NZ_CAAR01001437.1	RefSeq	gene	14728	15402	.	+	.	ID=gene-STY7866_RS26115;Name=STY7866_RS26115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26115
NZ_CAAR01001437.1	Protein Homology	CDS	14728	15402	.	+	0	ID=cds-WP_001025253.1;Parent=gene-STY7866_RS26115;Dbxref=Genbank:WP_001025253.1;Name=WP_001025253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455357.1;locus_tag=STY7866_RS26115;product=transcriptional regulator CecR;protein_id=WP_001025253.1;transl_table=11
NZ_CAAR01001437.1	RefSeq	gene	15402	16397	.	+	.	ID=gene-STY7866_RS26120;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=STY7866_RS26120
NZ_CAAR01001437.1	Protein Homology	CDS	15402	16397	.	+	0	ID=cds-WP_000743445.1;Parent=gene-STY7866_RS26120;Dbxref=Genbank:WP_000743445.1;Name=WP_000743445.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455356.1;locus_tag=STY7866_RS26120;product=secretion protein HlyD;protein_id=WP_000743445.1;transl_table=11
NZ_CAAR01001437.1	RefSeq	gene	16390	18126	.	+	.	ID=gene-STY7866_RS26125;Name=STY7866_RS26125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26125
NZ_CAAR01001437.1	Protein Homology	CDS	16390	18126	.	+	0	ID=cds-WP_001287626.1;Parent=gene-STY7866_RS26125;Dbxref=Genbank:WP_001287626.1;Name=WP_001287626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455355.1;locus_tag=STY7866_RS26125;product=ABC transporter ATP-binding protein;protein_id=WP_001287626.1;transl_table=11
NZ_CAAR01001437.1	RefSeq	gene	18119	19249	.	+	.	ID=gene-STY7866_RS26130;Name=STY7866_RS26130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26130
NZ_CAAR01001437.1	Protein Homology	CDS	18119	19249	.	+	0	ID=cds-WP_000045765.1;Parent=gene-STY7866_RS26130;Dbxref=Genbank:WP_000045765.1;Name=WP_000045765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455354.1;locus_tag=STY7866_RS26130;product=ABC transporter permease;protein_id=WP_000045765.1;transl_table=11
NZ_CAAR01001437.1	RefSeq	gene	19365	20375	.	+	.	ID=gene-STY7866_RS26135;Name=STY7866_RS26135;end_range=20375,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26135;partial=true
NZ_CAAR01001437.1	Protein Homology	CDS	19365	20375	.	+	0	ID=cds-WP_000469047.1;Parent=gene-STY7866_RS26135;Dbxref=Genbank:WP_000469047.1;Name=WP_000469047.1;end_range=20375,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455353.1;locus_tag=STY7866_RS26135;partial=true;product=ABC transporter permease;protein_id=WP_000469047.1;transl_table=11
##sequence-region NZ_CAAR01001436.1 1 1427
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001436.1	RefSeq	region	1	1427	.	+	.	ID=NZ_CAAR01001436.1:1..1427;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001436.1	RefSeq	pseudogene	1	117	.	+	.	ID=gene-STY7866_RS26010;Name=STY7866_RS26010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26010;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001436.1	Protein Homology	CDS	1	117	.	+	0	ID=cds-STY7866_RS26010;Parent=gene-STY7866_RS26010;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458704.1;locus_tag=STY7866_RS26010;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001436.1	RefSeq	gene	121	336	.	+	.	ID=gene-STY7866_RS26015;Name=STY7866_RS26015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26015
NZ_CAAR01001436.1	Protein Homology	CDS	121	336	.	+	0	ID=cds-WP_000171566.1;Parent=gene-STY7866_RS26015;Dbxref=Genbank:WP_000171566.1;Name=WP_000171566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458703.1;locus_tag=STY7866_RS26015;product=hypothetical protein;protein_id=WP_000171566.1;transl_table=11
NZ_CAAR01001436.1	RefSeq	gene	317	826	.	+	.	ID=gene-STY7866_RS26020;Name=STY7866_RS26020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26020
NZ_CAAR01001436.1	Protein Homology	CDS	317	826	.	+	0	ID=cds-WP_001097942.1;Parent=gene-STY7866_RS26020;Dbxref=Genbank:WP_001097942.1;Name=WP_001097942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001069913.1;locus_tag=STY7866_RS26020;product=lysozyme;protein_id=WP_001097942.1;transl_table=11
NZ_CAAR01001436.1	RefSeq	gene	831	1208	.	+	.	ID=gene-STY7866_RS26025;Name=STY7866_RS26025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26025
NZ_CAAR01001436.1	Protein Homology	CDS	831	1208	.	+	0	ID=cds-WP_000731034.1;Parent=gene-STY7866_RS26025;Dbxref=Genbank:WP_000731034.1;Name=WP_000731034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458701.1;locus_tag=STY7866_RS26025;product=hypothetical protein;protein_id=WP_000731034.1;transl_table=11
NZ_CAAR01001436.1	RefSeq	pseudogene	1208	1427	.	+	.	ID=gene-STY7866_RS26030;Name=STY7866_RS26030;end_range=1427,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26030;partial=true;pseudo=true
NZ_CAAR01001436.1	Protein Homology	CDS	1208	1427	.	+	0	ID=cds-STY7866_RS26030;Parent=gene-STY7866_RS26030;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1427,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458700.1;locus_tag=STY7866_RS26030;partial=true;product=LysB family phage lysis regulatory protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001435.1 1 227
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001435.1	RefSeq	region	1	227	.	+	.	ID=NZ_CAAR01001435.1:1..227;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001435.1	RefSeq	pseudogene	1	227	.	-	.	ID=gene-STY7866_RS26005;Name=tnpA;end_range=227,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=STY7866_RS26005;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001435.1	Protein Homology	CDS	1	227	.	-	0	ID=cds-STY7866_RS26005;Parent=gene-STY7866_RS26005;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;end_range=227,.;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454840.1;locus_tag=STY7866_RS26005;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001434.1 1 276
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001434.1	RefSeq	region	1	276	.	+	.	ID=NZ_CAAR01001434.1:1..276;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001434.1	RefSeq	pseudogene	39	137	.	+	.	ID=gene-STY7866_RS29860;Name=STY7866_RS29860;end_range=137,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29860;partial=true;pseudo=true;start_range=.,39
NZ_CAAR01001434.1	Protein Homology	CDS	39	137	.	+	0	ID=cds-STY7866_RS29860;Parent=gene-STY7866_RS29860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=137,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001348187.1;locus_tag=STY7866_RS29860;partial=true;product=MFS transporter;pseudo=true;start_range=.,39;transl_table=11
NZ_CAAR01001434.1	RefSeq	pseudogene	110	276	.	-	.	ID=gene-STY7866_RS26675;Name=STY7866_RS26675;end_range=276,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26675;partial=true;pseudo=true
NZ_CAAR01001434.1	Protein Homology	CDS	110	276	.	-	0	ID=cds-STY7866_RS26675;Parent=gene-STY7866_RS26675;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=276,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454840.1;locus_tag=STY7866_RS26675;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001433.1 1 3804
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001433.1	RefSeq	region	1	3804	.	+	.	ID=NZ_CAAR01001433.1:1..3804;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001433.1	RefSeq	gene	24	1049	.	-	.	ID=gene-STY7866_RS25985;Name=STY7866_RS25985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25985
NZ_CAAR01001433.1	Protein Homology	CDS	24	1049	.	-	0	ID=cds-WP_000645995.1;Parent=gene-STY7866_RS25985;Dbxref=Genbank:WP_000645995.1;Name=WP_000645995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=STY7866_RS25985;product=L-threonine 3-dehydrogenase;protein_id=WP_000645995.1;transl_table=11
NZ_CAAR01001433.1	RefSeq	gene	1059	2255	.	-	.	ID=gene-STY7866_RS25990;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=STY7866_RS25990
NZ_CAAR01001433.1	Protein Homology	CDS	1059	2255	.	-	0	ID=cds-WP_001213794.1;Parent=gene-STY7866_RS25990;Dbxref=Genbank:WP_001213794.1;Name=WP_001213794.1;gbkey=CDS;gene=kbl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=STY7866_RS25990;product=glycine C-acetyltransferase;protein_id=WP_001213794.1;transl_table=11
NZ_CAAR01001433.1	RefSeq	gene	2458	3390	.	+	.	ID=gene-STY7866_RS25995;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=STY7866_RS25995
NZ_CAAR01001433.1	Protein Homology	CDS	2458	3390	.	+	0	ID=cds-WP_000587771.1;Parent=gene-STY7866_RS25995;Dbxref=Genbank:WP_000587771.1;Name=WP_000587771.1;gbkey=CDS;gene=rfaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=STY7866_RS25995;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587771.1;transl_table=11
NZ_CAAR01001433.1	RefSeq	gene	3393	3804	.	+	.	ID=gene-STY7866_RS26000;Name=waaF;end_range=3804,.;gbkey=Gene;gene=waaF;gene_biotype=protein_coding;locus_tag=STY7866_RS26000;partial=true
NZ_CAAR01001433.1	Protein Homology	CDS	3393	3804	.	+	0	ID=cds-WP_000699207.1;Parent=gene-STY7866_RS26000;Dbxref=Genbank:WP_000699207.1;Name=WP_000699207.1;end_range=3804,.;gbkey=CDS;gene=waaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458216.1;locus_tag=STY7866_RS26000;partial=true;product=lipopolysaccharide heptosyltransferase II;protein_id=WP_000699207.1;transl_table=11
##sequence-region NZ_CAAR01001432.1 1 10845
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001432.1	RefSeq	region	1	10845	.	+	.	ID=NZ_CAAR01001432.1:1..10845;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001432.1	RefSeq	gene	472	1506	.	+	.	ID=gene-STY7866_RS25925;Name=STY7866_RS25925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25925
NZ_CAAR01001432.1	Protein Homology	CDS	472	1506	.	+	0	ID=cds-WP_000798185.1;Parent=gene-STY7866_RS25925;Dbxref=Genbank:WP_000798185.1;Name=WP_000798185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458220.1;locus_tag=STY7866_RS25925;product=glycosyltransferase;protein_id=WP_000798185.1;transl_table=11
NZ_CAAR01001432.1	RefSeq	gene	1493	2455	.	-	.	ID=gene-STY7866_RS25930;Name=STY7866_RS25930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25930
NZ_CAAR01001432.1	Protein Homology	CDS	1493	2455	.	-	0	ID=cds-WP_001135520.1;Parent=gene-STY7866_RS25930;Dbxref=Genbank:WP_001135520.1;Name=WP_001135520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458221.1;locus_tag=STY7866_RS25930;product=divergent polysaccharide deacetylase family protein;protein_id=WP_001135520.1;transl_table=11
NZ_CAAR01001432.1	RefSeq	gene	2459	3742	.	-	.	ID=gene-STY7866_RS25935;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=STY7866_RS25935
NZ_CAAR01001432.1	Protein Homology	CDS	2459	3742	.	-	0	ID=cds-WP_001214137.1;Parent=gene-STY7866_RS25935;Dbxref=Genbank:WP_001214137.1;Name=WP_001214137.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458222.1;locus_tag=STY7866_RS25935;product=murein hydrolase activator EnvC;protein_id=WP_001214137.1;transl_table=11
NZ_CAAR01001432.1	RefSeq	gene	3752	5296	.	-	.	ID=gene-STY7866_RS25940;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=STY7866_RS25940
NZ_CAAR01001432.1	Protein Homology	CDS	3752	5296	.	-	0	ID=cds-WP_000116577.1;Parent=gene-STY7866_RS25940;Dbxref=Genbank:WP_000116577.1;Name=WP_000116577.1;gbkey=CDS;gene=gpmM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=STY7866_RS25940;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116577.1;transl_table=11
NZ_CAAR01001432.1	RefSeq	gene	5544	5975	.	+	.	ID=gene-STY7866_RS25945;Name=STY7866_RS25945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25945
NZ_CAAR01001432.1	Protein Homology	CDS	5544	5975	.	+	0	ID=cds-WP_001156179.1;Parent=gene-STY7866_RS25945;Dbxref=Genbank:WP_001156179.1;Name=WP_001156179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458224.1;locus_tag=STY7866_RS25945;product=rhodanese-like domain-containing protein;protein_id=WP_001156179.1;transl_table=11
NZ_CAAR01001432.1	RefSeq	gene	6061	6312	.	+	.	ID=gene-STY7866_RS25950;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=STY7866_RS25950
NZ_CAAR01001432.1	Protein Homology	CDS	6061	6312	.	+	0	ID=cds-WP_001273795.1;Parent=gene-STY7866_RS25950;Dbxref=Genbank:WP_001273795.1;Name=WP_001273795.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458225.1;locus_tag=STY7866_RS25950;product=glutaredoxin 3;protein_id=WP_001273795.1;transl_table=11
NZ_CAAR01001432.1	RefSeq	gene	6356	6823	.	+	.	ID=gene-STY7866_RS25955;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=STY7866_RS25955
NZ_CAAR01001432.1	Protein Homology	CDS	6356	6823	.	+	0	ID=cds-WP_000003370.1;Parent=gene-STY7866_RS25955;Dbxref=Genbank:WP_000003370.1;Name=WP_000003370.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458226.1;locus_tag=STY7866_RS25955;product=protein-export chaperone SecB;protein_id=WP_000003370.1;transl_table=11
NZ_CAAR01001432.1	RefSeq	gene	6823	7842	.	+	.	ID=gene-STY7866_RS25960;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=STY7866_RS25960
NZ_CAAR01001432.1	Protein Homology	CDS	6823	7842	.	+	0	ID=cds-WP_001076596.1;Parent=gene-STY7866_RS25960;Dbxref=Genbank:WP_001076596.1;Name=WP_001076596.1;gbkey=CDS;gene=gpsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458227.1;locus_tag=STY7866_RS25960;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076596.1;transl_table=11
NZ_CAAR01001432.1	RefSeq	gene	7920	8741	.	+	.	ID=gene-STY7866_RS25965;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=STY7866_RS25965
NZ_CAAR01001432.1	Protein Homology	CDS	7920	8741	.	+	0	ID=cds-WP_001112114.1;Parent=gene-STY7866_RS25965;Dbxref=Genbank:WP_001112114.1;Name=WP_001112114.1;gbkey=CDS;gene=cysE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=STY7866_RS25965;product=serine O-acetyltransferase;protein_id=WP_001112114.1;transl_table=11
NZ_CAAR01001432.1	RefSeq	pseudogene	8824	10134	.	-	.	ID=gene-STY7866_RS29855;Name=STY7866_RS29855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29855;pseudo=true
NZ_CAAR01001432.1	Protein Homology	CDS	8824	10134	.	-	0	ID=cds-STY7866_RS29855;Parent=gene-STY7866_RS29855;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=STY7866_RS29855;product=MFS transporter;pseudo=true;transl_table=11
NZ_CAAR01001432.1	RefSeq	pseudogene	10208	10845	.	-	.	ID=gene-STY7866_RS25980;Name=STY7866_RS25980;end_range=10845,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25980;partial=true;pseudo=true
NZ_CAAR01001432.1	Protein Homology	CDS	10208	10845	.	-	2	ID=cds-STY7866_RS25980;Parent=gene-STY7866_RS25980;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=10845,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458229.1;locus_tag=STY7866_RS25980;partial=true;product=L-talarate/galactarate dehydratase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001431.1 1 298
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001431.1	RefSeq	region	1	298	.	+	.	ID=NZ_CAAR01001431.1:1..298;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001431.1	RefSeq	pseudogene	1	298	.	-	.	ID=gene-STY7866_RS25920;Name=STY7866_RS25920;end_range=298,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25920;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001431.1	Protein Homology	CDS	1	298	.	-	0	ID=cds-STY7866_RS25920;Parent=gene-STY7866_RS25920;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;end_range=298,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456048.1;locus_tag=STY7866_RS25920;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001430.1 1 5781
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001430.1	RefSeq	region	1	5781	.	+	.	ID=NZ_CAAR01001430.1:1..5781;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001430.1	RefSeq	gene	365	763	.	-	.	ID=gene-STY7866_RS25880;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=protein_coding;locus_tag=STY7866_RS25880
NZ_CAAR01001430.1	Protein Homology	CDS	365	763	.	-	0	ID=cds-WP_000911334.1;Parent=gene-STY7866_RS25880;Dbxref=Genbank:WP_000911334.1;Name=WP_000911334.1;gbkey=CDS;gene=vapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457427.1;locus_tag=STY7866_RS25880;product=tRNA(fMet)-specific endonuclease VapC;protein_id=WP_000911334.1;transl_table=11
NZ_CAAR01001430.1	RefSeq	gene	763	990	.	-	.	ID=gene-STY7866_RS25885;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=STY7866_RS25885
NZ_CAAR01001430.1	Protein Homology	CDS	763	990	.	-	0	ID=cds-WP_000557549.1;Parent=gene-STY7866_RS25885;Dbxref=Genbank:WP_000557549.1;Name=WP_000557549.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457428.1;locus_tag=STY7866_RS25885;product=toxin-antitoxin system antitoxin VapB;protein_id=WP_000557549.1;transl_table=11
NZ_CAAR01001430.1	RefSeq	gene	1167	1418	.	+	.	ID=gene-STY7866_RS25890;Name=STY7866_RS25890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25890
NZ_CAAR01001430.1	Protein Homology	CDS	1167	1418	.	+	0	ID=cds-WP_001540858.1;Parent=gene-STY7866_RS25890;Dbxref=Genbank:WP_001540858.1;Name=WP_001540858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449411.1;locus_tag=STY7866_RS25890;product=hypothetical protein;protein_id=WP_001540858.1;transl_table=11
NZ_CAAR01001430.1	RefSeq	gene	1693	2499	.	+	.	ID=gene-STY7866_RS25900;Name=STY7866_RS25900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25900
NZ_CAAR01001430.1	Protein Homology	CDS	1693	2499	.	+	0	ID=cds-WP_077905073.1;Parent=gene-STY7866_RS25900;Dbxref=Genbank:WP_077905073.1;Name=WP_077905073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461953.1;locus_tag=STY7866_RS25900;product=DUF1460 domain-containing protein;protein_id=WP_077905073.1;transl_table=11
NZ_CAAR01001430.1	RefSeq	gene	3132	4253	.	-	.	ID=gene-STY7866_RS25905;Name=STY7866_RS25905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25905
NZ_CAAR01001430.1	Protein Homology	CDS	3132	4253	.	-	0	ID=cds-WP_000028980.1;Parent=gene-STY7866_RS25905;Dbxref=Genbank:WP_000028980.1;Name=WP_000028980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028980.1;locus_tag=STY7866_RS25905;product=hypothetical protein;protein_id=WP_000028980.1;transl_table=11
NZ_CAAR01001430.1	RefSeq	gene	4355	4765	.	-	.	ID=gene-STY7866_RS25910;Name=STY7866_RS25910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25910
NZ_CAAR01001430.1	Protein Homology	CDS	4355	4765	.	-	0	ID=cds-WP_000028498.1;Parent=gene-STY7866_RS25910;Dbxref=Genbank:WP_000028498.1;Name=WP_000028498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028498.1;locus_tag=STY7866_RS25910;product=hypothetical protein;protein_id=WP_000028498.1;transl_table=11
NZ_CAAR01001430.1	RefSeq	pseudogene	4893	5097	.	-	.	ID=gene-STY7866_RS29850;Name=STY7866_RS29850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29850;pseudo=true
NZ_CAAR01001430.1	Protein Homology	CDS	4893	5097	.	-	0	ID=cds-STY7866_RS29850;Parent=gene-STY7866_RS29850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000184035.1;locus_tag=STY7866_RS29850;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01001430.1	RefSeq	gene	5101	5781	.	-	.	ID=gene-STY7866_RS25915;Name=STY7866_RS25915;end_range=5781,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25915;partial=true
NZ_CAAR01001430.1	Protein Homology	CDS	5101	5781	.	-	0	ID=cds-WP_000707971.1;Parent=gene-STY7866_RS25915;Dbxref=Genbank:WP_000707971.1;Name=WP_000707971.1;end_range=5781,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000082599.1;locus_tag=STY7866_RS25915;partial=true;product=Rha family transcriptional regulator;protein_id=WP_000707971.1;transl_table=11
##sequence-region NZ_CAAR01001429.1 1 384
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001429.1	RefSeq	region	1	384	.	+	.	ID=NZ_CAAR01001429.1:1..384;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001429.1	RefSeq	gene	30	384	.	+	.	ID=gene-STY7866_RS25875;Name=STY7866_RS25875;end_range=384,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25875;partial=true
NZ_CAAR01001429.1	Protein Homology	CDS	30	384	.	+	0	ID=cds-WP_001766505.1;Parent=gene-STY7866_RS25875;Dbxref=Genbank:WP_001766505.1;Name=WP_001766505.1;end_range=384,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=STY7866_RS25875;partial=true;product=TGS domain-containing protein;protein_id=WP_001766505.1;transl_table=11
##sequence-region NZ_CAAR01001428.1 1 9851
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001428.1	RefSeq	region	1	9851	.	+	.	ID=NZ_CAAR01001428.1:1..9851;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001428.1	RefSeq	gene	81	1307	.	+	.	ID=gene-STY7866_RS25800;Name=STY7866_RS25800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25800
NZ_CAAR01001428.1	Protein Homology	CDS	81	1307	.	+	0	ID=cds-WP_000809956.1;Parent=gene-STY7866_RS25800;Dbxref=Genbank:WP_000809956.1;Name=WP_000809956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458128.1;locus_tag=STY7866_RS25800;product=DUF3748 domain-containing protein;protein_id=WP_000809956.1;transl_table=11
NZ_CAAR01001428.1	RefSeq	gene	1309	1644	.	-	.	ID=gene-STY7866_RS25805;Name=STY7866_RS25805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25805
NZ_CAAR01001428.1	Protein Homology	CDS	1309	1644	.	-	0	ID=cds-WP_012543411.1;Parent=gene-STY7866_RS25805;Dbxref=Genbank:WP_012543411.1;Name=WP_012543411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458129.3;locus_tag=STY7866_RS25805;product=YceK/YidQ family lipoprotein;protein_id=WP_012543411.1;transl_table=11
NZ_CAAR01001428.1	RefSeq	gene	1951	2364	.	+	.	ID=gene-STY7866_RS25810;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=STY7866_RS25810
NZ_CAAR01001428.1	Protein Homology	CDS	1951	2364	.	+	0	ID=cds-WP_001532742.1;Parent=gene-STY7866_RS25810;Dbxref=Genbank:WP_001532742.1;Name=WP_001532742.1;gbkey=CDS;gene=ibpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=STY7866_RS25810;product=heat shock chaperone IbpA;protein_id=WP_001532742.1;transl_table=11
NZ_CAAR01001428.1	RefSeq	gene	2474	2902	.	+	.	ID=gene-STY7866_RS25815;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=STY7866_RS25815
NZ_CAAR01001428.1	Protein Homology	CDS	2474	2902	.	+	0	ID=cds-WP_001766501.1;Parent=gene-STY7866_RS25815;Dbxref=Genbank:WP_001766501.1;Name=WP_001766501.1;gbkey=CDS;gene=ibpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458131.1;locus_tag=STY7866_RS25815;product=heat shock chaperone IbpB;protein_id=WP_001766501.1;transl_table=11
NZ_CAAR01001428.1	RefSeq	gene	3096	4757	.	+	.	ID=gene-STY7866_RS25820;Name=STY7866_RS25820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25820
NZ_CAAR01001428.1	Protein Homology	CDS	3096	4757	.	+	0	ID=cds-WP_001279783.1;Parent=gene-STY7866_RS25820;Dbxref=Genbank:WP_001279783.1;Name=WP_001279783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458132.1;locus_tag=STY7866_RS25820;product=putative transporter;protein_id=WP_001279783.1;transl_table=11
NZ_CAAR01001428.1	RefSeq	pseudogene	5200	5547	.	+	.	ID=gene-STY7866_RS29845;Name=STY7866_RS29845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29845;pseudo=true
NZ_CAAR01001428.1	Protein Homology	CDS	5200	5547	.	+	0	ID=cds-STY7866_RS29845;Parent=gene-STY7866_RS29845;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=STY7866_RS29845;product=DUF202 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01001428.1	RefSeq	gene	5537	5899	.	+	.	ID=gene-STY7866_RS25845;Name=STY7866_RS25845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25845
NZ_CAAR01001428.1	Protein Homology	CDS	5537	5899	.	+	0	ID=cds-WP_001113457.1;Parent=gene-STY7866_RS25845;Dbxref=Genbank:WP_001113457.1;Name=WP_001113457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458133.1;locus_tag=STY7866_RS25845;product=DUF202 domain-containing protein;protein_id=WP_001113457.1;transl_table=11
NZ_CAAR01001428.1	RefSeq	gene	5896	6426	.	+	.	ID=gene-STY7866_RS25850;Name=STY7866_RS25850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25850
NZ_CAAR01001428.1	Protein Homology	CDS	5896	6426	.	+	0	ID=cds-WP_000147843.1;Parent=gene-STY7866_RS25850;Dbxref=Genbank:WP_000147843.1;Name=WP_000147843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458134.1;locus_tag=STY7866_RS25850;product=radical SAM protein;protein_id=WP_000147843.1;transl_table=11
NZ_CAAR01001428.1	RefSeq	gene	6508	7830	.	-	.	ID=gene-STY7866_RS25855;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=STY7866_RS25855
NZ_CAAR01001428.1	Protein Homology	CDS	6508	7830	.	-	0	ID=cds-WP_000427787.1;Parent=gene-STY7866_RS25855;Dbxref=Genbank:WP_000427787.1;Name=WP_000427787.1;gbkey=CDS;gene=dsdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458135.1;locus_tag=STY7866_RS25855;product=D-serine ammonia-lyase;protein_id=WP_000427787.1;transl_table=11
NZ_CAAR01001428.1	RefSeq	gene	7848	9185	.	-	.	ID=gene-STY7866_RS25860;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=STY7866_RS25860
NZ_CAAR01001428.1	Protein Homology	CDS	7848	9185	.	-	0	ID=cds-WP_000543313.1;Parent=gene-STY7866_RS25860;Dbxref=Genbank:WP_000543313.1;Name=WP_000543313.1;gbkey=CDS;gene=dsdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458136.1;locus_tag=STY7866_RS25860;product=D-serine transporter DsdX;protein_id=WP_000543313.1;transl_table=11
NZ_CAAR01001428.1	RefSeq	gene	9412	9851	.	+	.	ID=gene-STY7866_RS25865;Name=STY7866_RS25865;end_range=9851,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25865;partial=true
NZ_CAAR01001428.1	Protein Homology	CDS	9412	9851	.	+	0	ID=cds-WP_000433591.1;Parent=gene-STY7866_RS25865;Dbxref=Genbank:WP_000433591.1;Name=WP_000433591.1;end_range=9851,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458137.1;locus_tag=STY7866_RS25865;partial=true;product=LysR family transcriptional regulator;protein_id=WP_000433591.1;transl_table=11
##sequence-region NZ_CAAR01001427.1 1 466
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001427.1	RefSeq	region	1	466	.	+	.	ID=NZ_CAAR01001427.1:1..466;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001427.1	RefSeq	gene	1	466	.	+	.	ID=gene-STY7866_RS25795;Name=STY7866_RS25795;end_range=466,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25795;partial=true;start_range=.,1
NZ_CAAR01001427.1	Protein Homology	CDS	1	466	.	+	0	ID=cds-WP_000407303.1;Parent=gene-STY7866_RS25795;Dbxref=Genbank:WP_000407303.1;Name=WP_000407303.1;end_range=466,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740079.1;locus_tag=STY7866_RS25795;partial=true;product=hypothetical protein;protein_id=WP_000407303.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001426.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001426.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01001426.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001425.1 1 99
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001425.1	RefSeq	region	1	99	.	+	.	ID=NZ_CAAR01001425.1:1..99;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001424.1 1 1095
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001424.1	RefSeq	region	1	1095	.	+	.	ID=NZ_CAAR01001424.1:1..1095;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001424.1	RefSeq	gene	1	969	.	-	.	ID=gene-STY7866_RS25785;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=STY7866_RS25785;partial=true;start_range=.,1
NZ_CAAR01001424.1	Protein Homology	CDS	1	969	.	-	0	ID=cds-WP_001766499.1;Parent=gene-STY7866_RS25785;Dbxref=Genbank:WP_001766499.1;Name=WP_001766499.1;gbkey=CDS;gene=entC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=STY7866_RS25785;partial=true;product=isochorismate synthase EntC;protein_id=WP_001766499.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001423.1 1 196
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001423.1	RefSeq	region	1	196	.	+	.	ID=NZ_CAAR01001423.1:1..196;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001422.1 1 544
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001422.1	RefSeq	region	1	544	.	+	.	ID=NZ_CAAR01001422.1:1..544;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001422.1	RefSeq	gene	29	544	.	-	.	ID=gene-STY7866_RS25780;Name=STY7866_RS25780;end_range=544,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25780;partial=true
NZ_CAAR01001422.1	Protein Homology	CDS	29	544	.	-	0	ID=cds-WP_000325170.1;Parent=gene-STY7866_RS25780;Dbxref=Genbank:WP_000325170.1;Name=WP_000325170.1;Note=oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO;end_range=544,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=STY7866_RS25780;partial=true;product=hypothetical protein;protein_id=WP_000325170.1;transl_table=11
##sequence-region NZ_CAAR01001421.1 1 293
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001421.1	RefSeq	region	1	293	.	+	.	ID=NZ_CAAR01001421.1:1..293;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001421.1	RefSeq	pseudogene	206	286	.	+	.	ID=gene-STY7866_RS29830;Name=STY7866_RS29830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29830;partial=true;pseudo=true;start_range=.,206
NZ_CAAR01001421.1	Protein Homology	CDS	206	286	.	+	0	ID=cds-STY7866_RS29830;Parent=gene-STY7866_RS29830;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006462521.1;locus_tag=STY7866_RS29830;partial=true;product=paraslipin;pseudo=true;start_range=.,206;transl_table=11
##sequence-region NZ_CAAR01001420.1 1 709
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001420.1	RefSeq	region	1	709	.	+	.	ID=NZ_CAAR01001420.1:1..709;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001420.1	RefSeq	gene	110	568	.	-	.	ID=gene-STY7866_RS25765;Name=STY7866_RS25765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25765
NZ_CAAR01001420.1	Protein Homology	CDS	110	568	.	-	0	ID=cds-WP_000502119.1;Parent=gene-STY7866_RS25765;Dbxref=Genbank:WP_000502119.1;Name=WP_000502119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454994.1;locus_tag=STY7866_RS25765;product=IS200/IS605-like element IS200F family transposase;protein_id=WP_000502119.1;transl_table=11
##sequence-region NZ_CAAR01001419.1 1 5549
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001419.1	RefSeq	region	1	5549	.	+	.	ID=NZ_CAAR01001419.1:1..5549;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001419.1	RefSeq	gene	179	3382	.	-	.	ID=gene-STY7866_RS25745;Name=STY7866_RS25745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25745
NZ_CAAR01001419.1	Protein Homology	CDS	179	3382	.	-	0	ID=cds-WP_000827472.1;Parent=gene-STY7866_RS25745;Dbxref=Genbank:WP_000827472.1;Name=WP_000827472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455679.1;locus_tag=STY7866_RS25745;product=ribonuclease E;protein_id=WP_000827472.1;transl_table=11
NZ_CAAR01001419.1	RefSeq	gene	3956	4915	.	+	.	ID=gene-STY7866_RS25755;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=STY7866_RS25755
NZ_CAAR01001419.1	Protein Homology	CDS	3956	4915	.	+	0	ID=cds-WP_000846324.1;Parent=gene-STY7866_RS25755;Dbxref=Genbank:WP_000846324.1;Name=WP_000846324.1;gbkey=CDS;gene=rluC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455681.1;locus_tag=STY7866_RS25755;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846324.1;transl_table=11
NZ_CAAR01001419.1	RefSeq	gene	4998	5549	.	-	.	ID=gene-STY7866_RS25760;Name=STY7866_RS25760;end_range=5549,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25760;partial=true
NZ_CAAR01001419.1	Protein Homology	CDS	4998	5549	.	-	0	ID=cds-WP_000327283.1;Parent=gene-STY7866_RS25760;Dbxref=Genbank:WP_000327283.1;Name=WP_000327283.1;end_range=5549,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455682.1;locus_tag=STY7866_RS25760;partial=true;product=septum formation inhibitor Maf;protein_id=WP_000327283.1;transl_table=11
##sequence-region NZ_CAAR01001418.1 1 1233
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001418.1	RefSeq	region	1	1233	.	+	.	ID=NZ_CAAR01001418.1:1..1233;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001418.1	RefSeq	gene	1	292	.	+	.	ID=gene-STY7866_RS25735;Name=STY7866_RS25735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25735;partial=true;start_range=.,1
NZ_CAAR01001418.1	Protein Homology	CDS	1	292	.	+	1	ID=cds-WP_000474377.1;Parent=gene-STY7866_RS25735;Dbxref=Genbank:WP_000474377.1;Name=WP_000474377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503759.1;locus_tag=STY7866_RS25735;partial=true;product=hypothetical protein;protein_id=WP_000474377.1;start_range=.,1;transl_table=11
NZ_CAAR01001418.1	RefSeq	gene	299	916	.	-	.	ID=gene-STY7866_RS25740;Name=STY7866_RS25740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25740
NZ_CAAR01001418.1	Protein Homology	CDS	299	916	.	-	0	ID=cds-WP_001057643.1;Parent=gene-STY7866_RS25740;Dbxref=Genbank:WP_001057643.1;Name=WP_001057643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456050.1;locus_tag=STY7866_RS25740;product=tail assembly protein;protein_id=WP_001057643.1;transl_table=11
NZ_CAAR01001418.1	RefSeq	gene	916	1233	.	-	.	ID=gene-STY7866_RS29825;Name=STY7866_RS29825;end_range=1233,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29825;partial=true
NZ_CAAR01001418.1	Protein Homology	CDS	916	1233	.	-	0	ID=cds-WP_024151147.1;Parent=gene-STY7866_RS29825;Dbxref=Genbank:WP_024151147.1;Name=WP_024151147.1;end_range=1233,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000283275.1;locus_tag=STY7866_RS29825;partial=true;product=hypothetical protein;protein_id=WP_024151147.1;transl_table=11
##sequence-region NZ_CAAR01001417.1 1 3198
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001417.1	RefSeq	region	1	3198	.	+	.	ID=NZ_CAAR01001417.1:1..3198;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001417.1	RefSeq	gene	1	167	.	-	.	ID=gene-STY7866_RS29820;Name=STY7866_RS29820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29820;partial=true;start_range=.,1
NZ_CAAR01001417.1	Protein Homology	CDS	1	167	.	-	0	ID=cds-WP_151260025.1;Parent=gene-STY7866_RS29820;Dbxref=Genbank:WP_151260025.1;Name=WP_151260025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001703197.1;locus_tag=STY7866_RS29820;partial=true;product=tail fiber protein;protein_id=WP_151260025.1;start_range=.,1;transl_table=11
NZ_CAAR01001417.1	RefSeq	pseudogene	176	676	.	-	.	ID=gene-STY7866_RS25710;Name=STY7866_RS25710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25710;partial=true;pseudo=true;start_range=.,176
NZ_CAAR01001417.1	Protein Homology	CDS	176	676	.	-	0	ID=cds-STY7866_RS25710;Parent=gene-STY7866_RS25710;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122506.1;locus_tag=STY7866_RS25710;partial=true;product=phage tail protein;pseudo=true;start_range=.,176;transl_table=11
NZ_CAAR01001417.1	RefSeq	pseudogene	679	1257	.	-	.	ID=gene-STY7866_RS25715;Name=STY7866_RS25715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25715;pseudo=true
NZ_CAAR01001417.1	Protein Homology	CDS	679	1257	.	-	0	ID=cds-STY7866_RS25715;Parent=gene-STY7866_RS25715;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456047.1;locus_tag=STY7866_RS25715;product=phage tail protein I;pseudo=true;transl_table=11
NZ_CAAR01001417.1	RefSeq	gene	1250	2353	.	-	.	ID=gene-STY7866_RS25720;Name=STY7866_RS25720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25720
NZ_CAAR01001417.1	Protein Homology	CDS	1250	2353	.	-	0	ID=cds-WP_001219103.1;Parent=gene-STY7866_RS25720;Dbxref=Genbank:WP_001219103.1;Name=WP_001219103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456046.1;locus_tag=STY7866_RS25720;product=baseplate protein;protein_id=WP_001219103.1;transl_table=11
NZ_CAAR01001417.1	RefSeq	gene	2344	2691	.	-	.	ID=gene-STY7866_RS25725;Name=STY7866_RS25725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25725
NZ_CAAR01001417.1	Protein Homology	CDS	2344	2691	.	-	0	ID=cds-WP_000859114.1;Parent=gene-STY7866_RS25725;Dbxref=Genbank:WP_000859114.1;Name=WP_000859114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456045.1;locus_tag=STY7866_RS25725;product=baseplate protein;protein_id=WP_000859114.1;transl_table=11
NZ_CAAR01001417.1	RefSeq	gene	2748	3198	.	-	.	ID=gene-STY7866_RS25730;Name=STY7866_RS25730;end_range=3198,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25730;partial=true
NZ_CAAR01001417.1	Protein Homology	CDS	2748	3198	.	-	1	ID=cds-WP_000330528.1;Parent=gene-STY7866_RS25730;Dbxref=Genbank:WP_000330528.1;Name=WP_000330528.1;end_range=3198,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456044.1;locus_tag=STY7866_RS25730;partial=true;product=phage baseplate assembly protein V;protein_id=WP_000330528.1;transl_table=11
##sequence-region NZ_CAAR01001416.1 1 171
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001416.1	RefSeq	region	1	171	.	+	.	ID=NZ_CAAR01001416.1:1..171;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001415.1 1 10309
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001415.1	RefSeq	region	1	10309	.	+	.	ID=NZ_CAAR01001415.1:1..10309;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001415.1	RefSeq	gene	1	1334	.	+	.	ID=gene-STY7866_RS25665;Name=STY7866_RS25665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25665;partial=true;start_range=.,1
NZ_CAAR01001415.1	Protein Homology	CDS	1	1334	.	+	2	ID=cds-WP_000407942.1;Parent=gene-STY7866_RS25665;Dbxref=Genbank:WP_000407942.1;Name=WP_000407942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457182.1;locus_tag=STY7866_RS25665;partial=true;product=sensor histidine kinase;protein_id=WP_000407942.1;start_range=.,1;transl_table=11
NZ_CAAR01001415.1	RefSeq	gene	1575	2480	.	+	.	ID=gene-STY7866_RS25670;Name=STY7866_RS25670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25670
NZ_CAAR01001415.1	Protein Homology	CDS	1575	2480	.	+	0	ID=cds-WP_000947097.1;Parent=gene-STY7866_RS25670;Dbxref=Genbank:WP_000947097.1;Name=WP_000947097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574833.1;locus_tag=STY7866_RS25670;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_000947097.1;transl_table=11
NZ_CAAR01001415.1	RefSeq	gene	3202	4098	.	-	.	ID=gene-STY7866_RS25680;Name=STY7866_RS25680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25680
NZ_CAAR01001415.1	Protein Homology	CDS	3202	4098	.	-	0	ID=cds-WP_000701509.1;Parent=gene-STY7866_RS25680;Dbxref=Genbank:WP_000701509.1;Name=WP_000701509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457181.1;locus_tag=STY7866_RS25680;product=antimicrobial resistance protein Mig-14;protein_id=WP_000701509.1;transl_table=11
NZ_CAAR01001415.1	RefSeq	gene	4098	4292	.	-	.	ID=gene-STY7866_RS29810;Name=STY7866_RS29810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29810
NZ_CAAR01001415.1	Protein Homology	CDS	4098	4292	.	-	0	ID=cds-WP_014341458.1;Parent=gene-STY7866_RS29810;Dbxref=Genbank:WP_014341458.1;Name=WP_014341458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574832.1;locus_tag=STY7866_RS29810;product=hypothetical protein;protein_id=WP_014341458.1;transl_table=11
NZ_CAAR01001415.1	RefSeq	gene	4392	5321	.	-	.	ID=gene-STY7866_RS25685;Name=STY7866_RS25685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25685
NZ_CAAR01001415.1	Protein Homology	CDS	4392	5321	.	-	0	ID=cds-WP_000178741.1;Parent=gene-STY7866_RS25685;Dbxref=Genbank:WP_000178741.1;Name=WP_000178741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457180.1;locus_tag=STY7866_RS25685;product=VirK family antimicrobial peptide resistance protein;protein_id=WP_000178741.1;transl_table=11
NZ_CAAR01001415.1	RefSeq	gene	5838	6890	.	+	.	ID=gene-STY7866_RS25690;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=STY7866_RS25690
NZ_CAAR01001415.1	Protein Homology	CDS	5838	6890	.	+	0	ID=cds-WP_001801692.1;Parent=gene-STY7866_RS25690;Dbxref=Genbank:WP_001801692.1;Name=WP_001801692.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457179.1;locus_tag=STY7866_RS25690;product=SPI-2 type III secretion system effector PipB2;protein_id=WP_001801692.1;transl_table=11
NZ_CAAR01001415.1	RefSeq	pseudogene	7065	7398	.	+	.	ID=gene-STY7866_RS29815;Name=STY7866_RS29815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29815;pseudo=true
NZ_CAAR01001415.1	Protein Homology	CDS	7065	7398	.	+	0	ID=cds-STY7866_RS29815;Parent=gene-STY7866_RS29815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449164.1;locus_tag=STY7866_RS29815;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01001415.1	RefSeq	gene	7340	7582	.	-	.	ID=gene-STY7866_RS25695;Name=STY7866_RS25695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25695
NZ_CAAR01001415.1	Protein Homology	CDS	7340	7582	.	-	0	ID=cds-WP_001212290.1;Parent=gene-STY7866_RS25695;Dbxref=Genbank:WP_001212290.1;Name=WP_001212290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233098.1;locus_tag=STY7866_RS25695;product=hypothetical protein;protein_id=WP_001212290.1;transl_table=11
NZ_CAAR01001415.1	RefSeq	gene	7912	10092	.	+	.	ID=gene-STY7866_RS25700;Name=STY7866_RS25700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25700
NZ_CAAR01001415.1	Protein Homology	CDS	7912	10092	.	+	0	ID=cds-WP_001682025.1;Parent=gene-STY7866_RS25700;Dbxref=Genbank:WP_001682025.1;Name=WP_001682025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457177.3;locus_tag=STY7866_RS25700;product=TonB-dependent siderophore receptor;protein_id=WP_001682025.1;transl_table=11
NZ_CAAR01001415.1	RefSeq	pseudogene	10152	10309	.	-	.	ID=gene-STY7866_RS25705;Name=STY7866_RS25705;end_range=10309,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25705;partial=true;pseudo=true
NZ_CAAR01001415.1	Protein Homology	CDS	10152	10309	.	-	2	ID=cds-STY7866_RS25705;Parent=gene-STY7866_RS25705;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=10309,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457176.1;locus_tag=STY7866_RS25705;partial=true;product=alpha/beta hydrolase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001414.1 1 4882
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001414.1	RefSeq	region	1	4882	.	+	.	ID=NZ_CAAR01001414.1:1..4882;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001414.1	RefSeq	gene	125	640	.	-	.	ID=gene-STY7866_RS25625;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=STY7866_RS25625
NZ_CAAR01001414.1	Protein Homology	CDS	125	640	.	-	0	ID=cds-WP_010989262.1;Parent=gene-STY7866_RS25625;Dbxref=Genbank:WP_010989262.1;Name=WP_010989262.1;gbkey=CDS;gene=mobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458055.1;locus_tag=STY7866_RS25625;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_010989262.1;transl_table=11
NZ_CAAR01001414.1	RefSeq	gene	637	1221	.	-	.	ID=gene-STY7866_RS25630;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=STY7866_RS25630
NZ_CAAR01001414.1	Protein Homology	CDS	637	1221	.	-	0	ID=cds-WP_001046874.1;Parent=gene-STY7866_RS25630;Dbxref=Genbank:WP_001046874.1;Name=WP_001046874.1;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458054.1;locus_tag=STY7866_RS25630;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001046874.1;transl_table=11
NZ_CAAR01001414.1	RefSeq	gene	1291	1560	.	+	.	ID=gene-STY7866_RS25635;Name=STY7866_RS25635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25635
NZ_CAAR01001414.1	Protein Homology	CDS	1291	1560	.	+	0	ID=cds-WP_000649858.1;Parent=gene-STY7866_RS25635;Dbxref=Genbank:WP_000649858.1;Name=WP_000649858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=STY7866_RS25635;product=YihD family protein;protein_id=WP_000649858.1;transl_table=11
NZ_CAAR01001414.1	RefSeq	gene	1637	2623	.	+	.	ID=gene-STY7866_RS25640;Name=STY7866_RS25640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25640
NZ_CAAR01001414.1	Protein Homology	CDS	1637	2623	.	+	0	ID=cds-WP_000999265.1;Parent=gene-STY7866_RS25640;Dbxref=Genbank:WP_000999265.1;Name=WP_000999265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458052.1;locus_tag=STY7866_RS25640;product=serine/threonine protein kinase;protein_id=WP_000999265.1;transl_table=11
NZ_CAAR01001414.1	RefSeq	gene	2640	3263	.	+	.	ID=gene-STY7866_RS25645;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=STY7866_RS25645
NZ_CAAR01001414.1	Protein Homology	CDS	2640	3263	.	+	0	ID=cds-WP_000725369.1;Parent=gene-STY7866_RS25645;Dbxref=Genbank:WP_000725369.1;Name=WP_000725369.1;gbkey=CDS;gene=dsbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458051.1;locus_tag=STY7866_RS25645;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725369.1;transl_table=11
NZ_CAAR01001414.1	RefSeq	gene	3276	4184	.	-	.	ID=gene-STY7866_RS25650;Name=STY7866_RS25650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25650
NZ_CAAR01001414.1	Protein Homology	CDS	3276	4184	.	-	0	ID=cds-WP_000196902.1;Parent=gene-STY7866_RS25650;Dbxref=Genbank:WP_000196902.1;Name=WP_000196902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458050.1;locus_tag=STY7866_RS25650;product=acyltransferase;protein_id=WP_000196902.1;transl_table=11
NZ_CAAR01001414.1	RefSeq	pseudogene	4572	4882	.	+	.	ID=gene-STY7866_RS26660;Name=STY7866_RS26660;end_range=4882,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26660;partial=true;pseudo=true
NZ_CAAR01001414.1	Protein Homology	CDS	4572	4882	.	+	0	ID=cds-STY7866_RS26660;Parent=gene-STY7866_RS26660;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4882,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458049.1;locus_tag=STY7866_RS26660;partial=true;product=DNA polymerase I;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001413.1 1 755
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001413.1	RefSeq	region	1	755	.	+	.	ID=NZ_CAAR01001413.1:1..755;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001413.1	RefSeq	pseudogene	1	755	.	-	.	ID=gene-STY7866_RS25620;Name=STY7866_RS25620;end_range=755,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25620;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001413.1	Protein Homology	CDS	1	755	.	-	1	ID=cds-STY7866_RS25620;Parent=gene-STY7866_RS25620;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=755,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457866.1;locus_tag=STY7866_RS25620;partial=true;product=oxidoreductase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001412.1 1 17410
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001412.1	RefSeq	region	1	17410	.	+	.	ID=NZ_CAAR01001412.1:1..17410;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001412.1	RefSeq	gene	353	1366	.	-	.	ID=gene-STY7866_RS25535;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=STY7866_RS25535
NZ_CAAR01001412.1	Protein Homology	CDS	353	1366	.	-	0	ID=cds-WP_000103568.1;Parent=gene-STY7866_RS25535;Dbxref=Genbank:WP_000103568.1;Name=WP_000103568.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458293.1;locus_tag=STY7866_RS25535;product=dipeptide ABC transporter ATP binding subunit DppF;protein_id=WP_000103568.1;transl_table=11
NZ_CAAR01001412.1	RefSeq	gene	1363	2346	.	-	.	ID=gene-STY7866_RS25540;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=STY7866_RS25540
NZ_CAAR01001412.1	Protein Homology	CDS	1363	2346	.	-	0	ID=cds-WP_001196507.1;Parent=gene-STY7866_RS25540;Dbxref=Genbank:WP_001196507.1;Name=WP_001196507.1;gbkey=CDS;gene=dppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458292.1;locus_tag=STY7866_RS25540;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196507.1;transl_table=11
NZ_CAAR01001412.1	RefSeq	gene	2357	3259	.	-	.	ID=gene-STY7866_RS25545;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=STY7866_RS25545
NZ_CAAR01001412.1	Protein Homology	CDS	2357	3259	.	-	0	ID=cds-WP_000084689.1;Parent=gene-STY7866_RS25545;Dbxref=Genbank:WP_000084689.1;Name=WP_000084689.1;gbkey=CDS;gene=dppC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=STY7866_RS25545;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084689.1;transl_table=11
NZ_CAAR01001412.1	RefSeq	gene	3269	4288	.	-	.	ID=gene-STY7866_RS25550;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=STY7866_RS25550
NZ_CAAR01001412.1	Protein Homology	CDS	3269	4288	.	-	0	ID=cds-WP_000938843.1;Parent=gene-STY7866_RS25550;Dbxref=Genbank:WP_000938843.1;Name=WP_000938843.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=STY7866_RS25550;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938843.1;transl_table=11
NZ_CAAR01001412.1	RefSeq	gene	4445	6052	.	-	.	ID=gene-STY7866_RS25555;Name=STY7866_RS25555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25555
NZ_CAAR01001412.1	Protein Homology	CDS	4445	6052	.	-	0	ID=cds-WP_000028045.1;Parent=gene-STY7866_RS25555;Dbxref=Genbank:WP_000028045.1;Name=WP_000028045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458289.1;locus_tag=STY7866_RS25555;product=ABC transporter substrate-binding protein;protein_id=WP_000028045.1;transl_table=11
NZ_CAAR01001412.1	RefSeq	pseudogene	6608	7932	.	-	.	ID=gene-STY7866_RS25560;Name=STY7866_RS25560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25560;pseudo=true
NZ_CAAR01001412.1	Protein Homology	CDS	6608	7932	.	-	0	ID=cds-STY7866_RS25560;Parent=gene-STY7866_RS25560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=STY7866_RS25560;product=uracil-xanthine permease;pseudo=true;transl_table=11
NZ_CAAR01001412.1	RefSeq	gene	7990	9114	.	-	.	ID=gene-STY7866_RS25565;Name=STY7866_RS25565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25565
NZ_CAAR01001412.1	Protein Homology	CDS	7990	9114	.	-	0	ID=cds-WP_000940824.1;Parent=gene-STY7866_RS25565;Dbxref=Genbank:WP_000940824.1;Name=WP_000940824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458288.1;locus_tag=STY7866_RS25565;product=PQQ-binding-like beta-propeller repeat protein;protein_id=WP_000940824.1;transl_table=11
NZ_CAAR01001412.1	RefSeq	gene	9264	10271	.	+	.	ID=gene-STY7866_RS25570;Name=STY7866_RS25570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25570
NZ_CAAR01001412.1	Protein Homology	CDS	9264	10271	.	+	0	ID=cds-WP_000290717.1;Parent=gene-STY7866_RS25570;Dbxref=Genbank:WP_000290717.1;Name=WP_000290717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458287.1;locus_tag=STY7866_RS25570;product=substrate-binding domain-containing protein;protein_id=WP_000290717.1;transl_table=11
NZ_CAAR01001412.1	RefSeq	gene	10262	10380	.	-	.	ID=gene-STY7866_RS29805;Name=STY7866_RS29805;gbkey=Gene;gene_biotype=ncRNA;locus_tag=STY7866_RS29805
NZ_CAAR01001412.1	cmsearch	ncRNA	10262	10380	.	-	.	ID=rna-STY7866_RS29805;Parent=gene-STY7866_RS29805;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS29805;product=RtT sRNA
NZ_CAAR01001412.1	cmsearch	exon	10262	10380	.	-	.	ID=exon-STY7866_RS29805-1;Parent=rna-STY7866_RS29805;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS29805;product=RtT sRNA
NZ_CAAR01001412.1	RefSeq	gene	10416	10492	.	-	.	ID=gene-STY7866_RS25580;Name=STY7866_RS25580;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS25580
NZ_CAAR01001412.1	tRNAscan-SE	tRNA	10416	10492	.	-	.	ID=rna-STY7866_RS25580;Parent=gene-STY7866_RS25580;anticodon=(pos:complement(10456..10458));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25580;product=tRNA-Pro
NZ_CAAR01001412.1	tRNAscan-SE	exon	10416	10492	.	-	.	ID=exon-STY7866_RS25580-1;Parent=rna-STY7866_RS25580;anticodon=(pos:complement(10456..10458));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25580;product=tRNA-Pro
NZ_CAAR01001412.1	RefSeq	pseudogene	10583	12275	.	-	.	ID=gene-STY7866_RS25585;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=pseudogene;locus_tag=STY7866_RS25585;pseudo=true
NZ_CAAR01001412.1	Protein Homology	CDS	10583	12275	.	-	0	ID=cds-STY7866_RS25585;Parent=gene-STY7866_RS25585;Note=frameshifted;gbkey=CDS;gene=eptB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458285.1;locus_tag=STY7866_RS25585;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;pseudo=true;transl_table=11
NZ_CAAR01001412.1	RefSeq	gene	12506	13210	.	-	.	ID=gene-STY7866_RS25590;Name=STY7866_RS25590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25590
NZ_CAAR01001412.1	Protein Homology	CDS	12506	13210	.	-	0	ID=cds-WP_000637074.1;Parent=gene-STY7866_RS25590;Dbxref=Genbank:WP_000637074.1;Name=WP_000637074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458284.1;locus_tag=STY7866_RS25590;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000637074.1;transl_table=11
NZ_CAAR01001412.1	RefSeq	gene	13367	13948	.	+	.	ID=gene-STY7866_RS25595;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=STY7866_RS25595
NZ_CAAR01001412.1	Protein Homology	CDS	13367	13948	.	+	0	ID=cds-WP_001188408.1;Parent=gene-STY7866_RS25595;Dbxref=Genbank:WP_001188408.1;Name=WP_001188408.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458283.1;locus_tag=STY7866_RS25595;product=DNA-3-methyladenine glycosylase I;protein_id=WP_001188408.1;transl_table=11
NZ_CAAR01001412.1	RefSeq	gene	13926	14366	.	+	.	ID=gene-STY7866_RS25600;Name=STY7866_RS25600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25600
NZ_CAAR01001412.1	Protein Homology	CDS	13926	14366	.	+	0	ID=cds-WP_000619903.1;Parent=gene-STY7866_RS25600;Dbxref=Genbank:WP_000619903.1;Name=WP_000619903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458282.1;locus_tag=STY7866_RS25600;product=N-acetyltransferase;protein_id=WP_000619903.1;transl_table=11
NZ_CAAR01001412.1	RefSeq	gene	14335	16668	.	-	.	ID=gene-STY7866_RS25605;Name=STY7866_RS25605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25605
NZ_CAAR01001412.1	Protein Homology	CDS	14335	16668	.	-	0	ID=cds-WP_000148449.1;Parent=gene-STY7866_RS25605;Dbxref=Genbank:WP_000148449.1;Name=WP_000148449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458281.1;locus_tag=STY7866_RS25605;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_000148449.1;transl_table=11
NZ_CAAR01001412.1	RefSeq	gene	16822	17410	.	+	.	ID=gene-STY7866_RS25610;Name=STY7866_RS25610;end_range=17410,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25610;partial=true
NZ_CAAR01001412.1	Protein Homology	CDS	16822	17410	.	+	0	ID=cds-WP_000747547.1;Parent=gene-STY7866_RS25610;Dbxref=Genbank:WP_000747547.1;Name=WP_000747547.1;end_range=17410,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458280.1;locus_tag=STY7866_RS25610;partial=true;product=OmpA family lipoprotein;protein_id=WP_000747547.1;transl_table=11
##sequence-region NZ_CAAR01001411.1 1 249
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001411.1	RefSeq	region	1	249	.	+	.	ID=NZ_CAAR01001411.1:1..249;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001411.1	RefSeq	gene	1	249	.	+	.	ID=gene-STY7866_RS29800;Name=STY7866_RS29800;end_range=249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29800;partial=true;start_range=.,1
NZ_CAAR01001411.1	Protein Homology	CDS	1	249	.	+	0	ID=cds-WP_001766477.1;Parent=gene-STY7866_RS29800;Dbxref=Genbank:WP_001766477.1;Name=WP_001766477.1;end_range=249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000283280.1;locus_tag=STY7866_RS29800;partial=true;product=hypothetical protein;protein_id=WP_001766477.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001410.1 1 180
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001410.1	RefSeq	region	1	180	.	+	.	ID=NZ_CAAR01001410.1:1..180;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001409.1 1 4356
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001409.1	RefSeq	region	1	4356	.	+	.	ID=NZ_CAAR01001409.1:1..4356;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001409.1	RefSeq	gene	267	1295	.	+	.	ID=gene-STY7866_RS25485;Name=STY7866_RS25485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25485
NZ_CAAR01001409.1	Protein Homology	CDS	267	1295	.	+	0	ID=cds-WP_000149790.1;Parent=gene-STY7866_RS25485;Dbxref=Genbank:WP_000149790.1;Name=WP_000149790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457928.1;locus_tag=STY7866_RS25485;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_000149790.1;transl_table=11
NZ_CAAR01001409.1	RefSeq	gene	1292	2254	.	+	.	ID=gene-STY7866_RS25490;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=STY7866_RS25490
NZ_CAAR01001409.1	Protein Homology	CDS	1292	2254	.	+	0	ID=cds-WP_000655746.1;Parent=gene-STY7866_RS25490;Dbxref=Genbank:WP_000655746.1;Name=WP_000655746.1;gbkey=CDS;gene=birA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457927.1;locus_tag=STY7866_RS25490;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000655746.1;transl_table=11
NZ_CAAR01001409.1	RefSeq	gene	2289	3239	.	-	.	ID=gene-STY7866_RS25495;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;gene_synonym=panK;locus_tag=STY7866_RS25495
NZ_CAAR01001409.1	Protein Homology	CDS	2289	3239	.	-	0	ID=cds-WP_000023068.1;Parent=gene-STY7866_RS25495;Dbxref=Genbank:WP_000023068.1;Name=WP_000023068.1;gbkey=CDS;gene=coaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457926.1;locus_tag=STY7866_RS25495;product=type I pantothenate kinase;protein_id=WP_000023068.1;transl_table=11
NZ_CAAR01001409.1	RefSeq	gene	3448	3621	.	-	.	ID=gene-STY7866_RS25500;Name=STY7866_RS25500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25500
NZ_CAAR01001409.1	Protein Homology	CDS	3448	3621	.	-	0	ID=cds-WP_001775645.1;Parent=gene-STY7866_RS25500;Dbxref=Genbank:WP_001775645.1;Name=WP_001775645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=STY7866_RS25500;product=hypothetical protein;protein_id=WP_001775645.1;transl_table=11
NZ_CAAR01001409.1	RefSeq	gene	3641	3716	.	+	.	ID=gene-STY7866_RS25505;Name=STY7866_RS25505;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS25505
NZ_CAAR01001409.1	tRNAscan-SE	tRNA	3641	3716	.	+	.	ID=rna-STY7866_RS25505;Parent=gene-STY7866_RS25505;anticodon=(pos:3674..3676);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25505;product=tRNA-Thr
NZ_CAAR01001409.1	tRNAscan-SE	exon	3641	3716	.	+	.	ID=exon-STY7866_RS25505-1;Parent=rna-STY7866_RS25505;anticodon=(pos:3674..3676);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25505;product=tRNA-Thr
NZ_CAAR01001409.1	RefSeq	gene	3725	3809	.	+	.	ID=gene-STY7866_RS25510;Name=STY7866_RS25510;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS25510
NZ_CAAR01001409.1	tRNAscan-SE	tRNA	3725	3809	.	+	.	ID=rna-STY7866_RS25510;Parent=gene-STY7866_RS25510;anticodon=(pos:3759..3761);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25510;product=tRNA-Tyr
NZ_CAAR01001409.1	tRNAscan-SE	exon	3725	3809	.	+	.	ID=exon-STY7866_RS25510-1;Parent=rna-STY7866_RS25510;anticodon=(pos:3759..3761);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25510;product=tRNA-Tyr
NZ_CAAR01001409.1	RefSeq	gene	3926	4000	.	+	.	ID=gene-STY7866_RS25515;Name=STY7866_RS25515;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS25515
NZ_CAAR01001409.1	tRNAscan-SE	tRNA	3926	4000	.	+	.	ID=rna-STY7866_RS25515;Parent=gene-STY7866_RS25515;anticodon=(pos:3959..3961);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25515;product=tRNA-Gly
NZ_CAAR01001409.1	tRNAscan-SE	exon	3926	4000	.	+	.	ID=exon-STY7866_RS25515-1;Parent=rna-STY7866_RS25515;anticodon=(pos:3959..3961);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25515;product=tRNA-Gly
NZ_CAAR01001409.1	RefSeq	gene	4007	4082	.	+	.	ID=gene-STY7866_RS25520;Name=STY7866_RS25520;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS25520
NZ_CAAR01001409.1	tRNAscan-SE	tRNA	4007	4082	.	+	.	ID=rna-STY7866_RS25520;Parent=gene-STY7866_RS25520;anticodon=(pos:4040..4042);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25520;product=tRNA-Thr
NZ_CAAR01001409.1	tRNAscan-SE	exon	4007	4082	.	+	.	ID=exon-STY7866_RS25520-1;Parent=rna-STY7866_RS25520;anticodon=(pos:4040..4042);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25520;product=tRNA-Thr
NZ_CAAR01001409.1	RefSeq	gene	4198	4356	.	+	.	ID=gene-STY7866_RS29795;Name=STY7866_RS29795;end_range=4356,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29795;partial=true
NZ_CAAR01001409.1	Protein Homology	CDS	4198	4356	.	+	0	ID=cds-WP_001543379.1;Parent=gene-STY7866_RS29795;Dbxref=Genbank:WP_001543379.1;Name=WP_001543379.1;end_range=4356,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=STY7866_RS29795;partial=true;product=elongation factor Tu;protein_id=WP_001543379.1;transl_table=11
##sequence-region NZ_CAAR01001408.1 1 200
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001408.1	RefSeq	region	1	200	.	+	.	ID=NZ_CAAR01001408.1:1..200;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001407.1 1 2304
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001407.1	RefSeq	region	1	2304	.	+	.	ID=NZ_CAAR01001407.1:1..2304;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001407.1	RefSeq	pseudogene	173	904	.	-	.	ID=gene-STY7866_RS25470;Name=STY7866_RS25470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25470;partial=true;pseudo=true;start_range=.,173
NZ_CAAR01001407.1	Protein Homology	CDS	173	904	.	-	0	ID=cds-STY7866_RS25470;Parent=gene-STY7866_RS25470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454920.1;locus_tag=STY7866_RS25470;partial=true;product=amidohydrolase;pseudo=true;start_range=.,173;transl_table=11
NZ_CAAR01001407.1	RefSeq	gene	1013	2304	.	-	.	ID=gene-STY7866_RS25475;Name=STY7866_RS25475;end_range=2304,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25475;partial=true
NZ_CAAR01001407.1	Protein Homology	CDS	1013	2304	.	-	2	ID=cds-WP_000322435.1;Parent=gene-STY7866_RS25475;Dbxref=Genbank:WP_000322435.1;Name=WP_000322435.1;end_range=2304,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454921.1;locus_tag=STY7866_RS25475;partial=true;product=acyl-CoA dehydrogenase;protein_id=WP_000322435.1;transl_table=11
##sequence-region NZ_CAAR01001406.1 1 1712
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001406.1	RefSeq	region	1	1712	.	+	.	ID=NZ_CAAR01001406.1:1..1712;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001406.1	RefSeq	pseudogene	68	136	.	-	.	ID=gene-STY7866_RS29780;Name=STY7866_RS29780;end_range=136,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29780;partial=true;pseudo=true;start_range=.,68
NZ_CAAR01001406.1	Protein Homology	CDS	68	136	.	-	0	ID=cds-STY7866_RS29780;Parent=gene-STY7866_RS29780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=136,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006883844.1;locus_tag=STY7866_RS29780;partial=true;product=RNA helicase;pseudo=true;start_range=.,68;transl_table=11
NZ_CAAR01001406.1	RefSeq	gene	178	585	.	+	.	ID=gene-STY7866_RS25455;Name=STY7866_RS25455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25455
NZ_CAAR01001406.1	Protein Homology	CDS	178	585	.	+	0	ID=cds-WP_000788200.1;Parent=gene-STY7866_RS25455;Dbxref=Genbank:WP_000788200.1;Name=WP_000788200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454919.1;locus_tag=STY7866_RS25455;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_000788200.1;transl_table=11
NZ_CAAR01001406.1	RefSeq	gene	910	1629	.	+	.	ID=gene-STY7866_RS25460;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=STY7866_RS25460
NZ_CAAR01001406.1	Protein Homology	CDS	910	1629	.	+	0	ID=cds-WP_000787614.1;Parent=gene-STY7866_RS25460;Dbxref=Genbank:WP_000787614.1;Name=WP_000787614.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454918.1;locus_tag=STY7866_RS25460;product=adhesin/invasin protein PagN;protein_id=WP_000787614.1;transl_table=11
NZ_CAAR01001406.1	RefSeq	pseudogene	1633	1712	.	-	.	ID=gene-STY7866_RS29785;Name=STY7866_RS29785;end_range=1712,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29785;partial=true;pseudo=true
NZ_CAAR01001406.1	Protein Homology	CDS	1633	1712	.	-	2	ID=cds-STY7866_RS29785;Parent=gene-STY7866_RS29785;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1712,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=STY7866_RS29785;partial=true;product=cytoplasmic protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001405.1 1 498
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001405.1	RefSeq	region	1	498	.	+	.	ID=NZ_CAAR01001405.1:1..498;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001405.1	RefSeq	gene	128	243	.	-	.	ID=gene-STY7866_RS25445;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=STY7866_RS25445
NZ_CAAR01001405.1	cmsearch	rRNA	128	243	.	-	.	ID=rna-STY7866_RS25445;Parent=gene-STY7866_RS25445;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS25445;product=5S ribosomal RNA
NZ_CAAR01001405.1	cmsearch	exon	128	243	.	-	.	ID=exon-STY7866_RS25445-1;Parent=rna-STY7866_RS25445;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS25445;product=5S ribosomal RNA
NZ_CAAR01001405.1	RefSeq	gene	283	358	.	-	.	ID=gene-STY7866_RS25450;Name=STY7866_RS25450;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS25450
NZ_CAAR01001405.1	tRNAscan-SE	tRNA	283	358	.	-	.	ID=rna-STY7866_RS25450;Parent=gene-STY7866_RS25450;anticodon=(pos:complement(323..325));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25450;product=tRNA-Thr
NZ_CAAR01001405.1	tRNAscan-SE	exon	283	358	.	-	.	ID=exon-STY7866_RS25450-1;Parent=rna-STY7866_RS25450;anticodon=(pos:complement(323..325));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25450;product=tRNA-Thr
##sequence-region NZ_CAAR01001404.1 1 1804
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001404.1	RefSeq	region	1	1804	.	+	.	ID=NZ_CAAR01001404.1:1..1804;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001404.1	RefSeq	gene	396	1520	.	+	.	ID=gene-STY7866_RS25435;Name=STY7866_RS25435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25435
NZ_CAAR01001404.1	Protein Homology	CDS	396	1520	.	+	0	ID=cds-WP_000917281.1;Parent=gene-STY7866_RS25435;Dbxref=Genbank:WP_000917281.1;Name=WP_000917281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456280.1;locus_tag=STY7866_RS25435;product=type III secretion system effector SopF;protein_id=WP_000917281.1;transl_table=11
##sequence-region NZ_CAAR01001403.1 1 1152
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001403.1	RefSeq	region	1	1152	.	+	.	ID=NZ_CAAR01001403.1:1..1152;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001403.1	RefSeq	gene	1	846	.	-	.	ID=gene-STY7866_RS25425;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=STY7866_RS25425;partial=true;start_range=.,1
NZ_CAAR01001403.1	Protein Homology	CDS	1	846	.	-	0	ID=cds-WP_000402554.1;Parent=gene-STY7866_RS25425;Dbxref=Genbank:WP_000402554.1;Name=WP_000402554.1;gbkey=CDS;gene=ghrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455629.1;locus_tag=STY7866_RS25425;partial=true;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000402554.1;start_range=.,1;transl_table=11
NZ_CAAR01001403.1	RefSeq	gene	845	1024	.	+	.	ID=gene-STY7866_RS25430;Name=STY7866_RS25430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25430
NZ_CAAR01001403.1	Protein Homology	CDS	845	1024	.	+	0	ID=cds-WP_000950662.1;Parent=gene-STY7866_RS25430;Dbxref=Genbank:WP_000950662.1;Name=WP_000950662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950665.1;locus_tag=STY7866_RS25430;product=hypothetical protein;protein_id=WP_000950662.1;transl_table=11
##sequence-region NZ_CAAR01001402.1 1 120
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001402.1	RefSeq	region	1	120	.	+	.	ID=NZ_CAAR01001402.1:1..120;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001402.1	RefSeq	gene	1	77	.	-	.	ID=gene-STY7866_RS29775;Name=STY7866_RS29775;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS29775
NZ_CAAR01001402.1	tRNAscan-SE	tRNA	1	77	.	-	.	ID=rna-STY7866_RS29775;Parent=gene-STY7866_RS29775;anticodon=(pos:complement(41..43));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS29775;product=tRNA-Asp
NZ_CAAR01001402.1	tRNAscan-SE	exon	1	77	.	-	.	ID=exon-STY7866_RS29775-1;Parent=rna-STY7866_RS29775;anticodon=(pos:complement(41..43));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS29775;product=tRNA-Asp
##sequence-region NZ_CAAR01001401.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001401.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01001401.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001400.1 1 1278
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001400.1	RefSeq	region	1	1278	.	+	.	ID=NZ_CAAR01001400.1:1..1278;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001400.1	RefSeq	gene	161	994	.	+	.	ID=gene-STY7866_RS25410;Name=STY7866_RS25410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25410
NZ_CAAR01001400.1	Protein Homology	CDS	161	994	.	+	0	ID=cds-WP_000216272.1;Parent=gene-STY7866_RS25410;Dbxref=Genbank:WP_000216272.1;Name=WP_000216272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458708.1;locus_tag=STY7866_RS25410;product=GPO family capsid scaffolding protein;protein_id=WP_000216272.1;transl_table=11
NZ_CAAR01001400.1	RefSeq	pseudogene	1011	1278	.	+	.	ID=gene-STY7866_RS25415;Name=STY7866_RS25415;end_range=1278,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25415;partial=true;pseudo=true
NZ_CAAR01001400.1	Protein Homology	CDS	1011	1278	.	+	0	ID=cds-STY7866_RS25415;Parent=gene-STY7866_RS25415;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1278,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458707.1;locus_tag=STY7866_RS25415;partial=true;product=capsid protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001399.1 1 3008
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001399.1	RefSeq	region	1	3008	.	+	.	ID=NZ_CAAR01001399.1:1..3008;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001399.1	RefSeq	pseudogene	112	748	.	-	.	ID=gene-STY7866_RS29765;Name=STY7866_RS29765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29765;pseudo=true
NZ_CAAR01001399.1	Protein Homology	CDS	112	748	.	-	0	ID=cds-STY7866_RS29765;Parent=gene-STY7866_RS29765;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001355627.1;locus_tag=STY7866_RS29765;product=AAA family ATPase;pseudo=true;transl_table=11
NZ_CAAR01001399.1	RefSeq	gene	1503	1682	.	+	.	ID=gene-STY7866_RS29770;Name=STY7866_RS29770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29770
NZ_CAAR01001399.1	Protein Homology	CDS	1503	1682	.	+	0	ID=cds-WP_001531405.1;Parent=gene-STY7866_RS29770;Dbxref=Genbank:WP_001531405.1;Name=WP_001531405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531405.1;locus_tag=STY7866_RS29770;product=hypothetical protein;protein_id=WP_001531405.1;transl_table=11
NZ_CAAR01001399.1	RefSeq	gene	1705	2415	.	+	.	ID=gene-STY7866_RS25400;Name=tcfA;gbkey=Gene;gene=tcfA;gene_biotype=protein_coding;locus_tag=STY7866_RS25400
NZ_CAAR01001399.1	Protein Homology	CDS	1705	2415	.	+	0	ID=cds-WP_001009503.1;Parent=gene-STY7866_RS25400;Dbxref=Genbank:WP_001009503.1;Name=WP_001009503.1;gbkey=CDS;gene=tcfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454912.1;locus_tag=STY7866_RS25400;product=fimbrial protein TcfA;protein_id=WP_001009503.1;transl_table=11
NZ_CAAR01001399.1	RefSeq	gene	2466	3008	.	+	.	ID=gene-STY7866_RS25405;Name=tcfB;end_range=3008,.;gbkey=Gene;gene=tcfB;gene_biotype=protein_coding;locus_tag=STY7866_RS25405;partial=true
NZ_CAAR01001399.1	Protein Homology	CDS	2466	3008	.	+	0	ID=cds-WP_000287809.1;Parent=gene-STY7866_RS25405;Dbxref=Genbank:WP_000287809.1;Name=WP_000287809.1;end_range=3008,.;gbkey=CDS;gene=tcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454913.1;locus_tag=STY7866_RS25405;partial=true;product=fimbrial protein TcfB;protein_id=WP_000287809.1;transl_table=11
##sequence-region NZ_CAAR01001398.1 1 139
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001398.1	RefSeq	region	1	139	.	+	.	ID=NZ_CAAR01001398.1:1..139;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001397.1 1 164
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001397.1	RefSeq	region	1	164	.	+	.	ID=NZ_CAAR01001397.1:1..164;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001396.1 1 188
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001396.1	RefSeq	region	1	188	.	+	.	ID=NZ_CAAR01001396.1:1..188;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001396.1	RefSeq	gene	112	187	.	-	.	ID=gene-STY7866_RS29755;Name=STY7866_RS29755;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS29755
NZ_CAAR01001396.1	tRNAscan-SE	tRNA	112	187	.	-	.	ID=rna-STY7866_RS29755;Parent=gene-STY7866_RS29755;anticodon=(pos:complement(152..154));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS29755;product=tRNA-Lys
NZ_CAAR01001396.1	tRNAscan-SE	exon	112	187	.	-	.	ID=exon-STY7866_RS29755-1;Parent=rna-STY7866_RS29755;anticodon=(pos:complement(152..154));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS29755;product=tRNA-Lys
##sequence-region NZ_CAAR01001395.1 1 120
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001395.1	RefSeq	region	1	120	.	+	.	ID=NZ_CAAR01001395.1:1..120;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001394.1 1 552
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001394.1	RefSeq	region	1	552	.	+	.	ID=NZ_CAAR01001394.1:1..552;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001394.1	RefSeq	pseudogene	1	552	.	-	.	ID=gene-STY7866_RS25375;Name=STY7866_RS25375;end_range=552,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25375;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001394.1	Protein Homology	CDS	1	552	.	-	2	ID=cds-STY7866_RS25375;Parent=gene-STY7866_RS25375;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=552,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455981.1;locus_tag=STY7866_RS25375;partial=true;product=dimethyl sulfoxide reductase subunit A;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001393.1 1 122
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001393.1	RefSeq	region	1	122	.	+	.	ID=NZ_CAAR01001393.1:1..122;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001392.1 1 212
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001392.1	RefSeq	region	1	212	.	+	.	ID=NZ_CAAR01001392.1:1..212;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001391.1 1 183
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001391.1	RefSeq	region	1	183	.	+	.	ID=NZ_CAAR01001391.1:1..183;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001390.1 1 2457
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001390.1	RefSeq	region	1	2457	.	+	.	ID=NZ_CAAR01001390.1:1..2457;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001390.1	RefSeq	gene	350	892	.	+	.	ID=gene-STY7866_RS25355;Name=STY7866_RS25355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25355
NZ_CAAR01001390.1	Protein Homology	CDS	350	892	.	+	0	ID=cds-WP_010989295.1;Parent=gene-STY7866_RS25355;Dbxref=Genbank:WP_010989295.1;Name=WP_010989295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989295.1;locus_tag=STY7866_RS25355;product=DUF1062 domain-containing protein;protein_id=WP_010989295.1;transl_table=11
NZ_CAAR01001390.1	RefSeq	gene	1103	1717	.	-	.	ID=gene-STY7866_RS25360;Name=STY7866_RS25360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25360
NZ_CAAR01001390.1	Protein Homology	CDS	1103	1717	.	-	0	ID=cds-WP_010989294.1;Parent=gene-STY7866_RS25360;Dbxref=Genbank:WP_010989294.1;Name=WP_010989294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458668.1;locus_tag=STY7866_RS25360;product=ParB-like nuclease domain-containing protein;protein_id=WP_010989294.1;transl_table=11
NZ_CAAR01001390.1	RefSeq	gene	1729	2457	.	-	.	ID=gene-STY7866_RS25365;Name=STY7866_RS25365;end_range=2457,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25365;partial=true
NZ_CAAR01001390.1	Protein Homology	CDS	1729	2457	.	-	0	ID=cds-WP_000316952.1;Parent=gene-STY7866_RS25365;Dbxref=Genbank:WP_000316952.1;Name=WP_000316952.1;end_range=2457,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458667.1;locus_tag=STY7866_RS25365;partial=true;product=DUF3440 domain-containing protein;protein_id=WP_000316952.1;transl_table=11
##sequence-region NZ_CAAR01001389.1 1 13775
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001389.1	RefSeq	region	1	13775	.	+	.	ID=NZ_CAAR01001389.1:1..13775;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001389.1	RefSeq	gene	1	159	.	-	.	ID=gene-STY7866_RS29745;Name=STY7866_RS29745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29745;partial=true;start_range=.,1
NZ_CAAR01001389.1	Protein Homology	CDS	1	159	.	-	0	ID=cds-WP_001543379.1-2;Parent=gene-STY7866_RS29745;Dbxref=Genbank:WP_001543379.1;Name=WP_001543379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=STY7866_RS29745;partial=true;product=elongation factor Tu;protein_id=WP_001543379.1;start_range=.,1;transl_table=11
NZ_CAAR01001389.1	RefSeq	gene	231	2345	.	-	.	ID=gene-STY7866_RS25270;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=STY7866_RS25270
NZ_CAAR01001389.1	Protein Homology	CDS	231	2345	.	-	0	ID=cds-WP_000124693.1;Parent=gene-STY7866_RS25270;Dbxref=Genbank:WP_000124693.1;Name=WP_000124693.1;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=STY7866_RS25270;product=elongation factor G;protein_id=WP_000124693.1;transl_table=11
NZ_CAAR01001389.1	RefSeq	gene	2442	2912	.	-	.	ID=gene-STY7866_RS25275;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=STY7866_RS25275
NZ_CAAR01001389.1	Protein Homology	CDS	2442	2912	.	-	0	ID=cds-WP_001138042.1;Parent=gene-STY7866_RS25275;Dbxref=Genbank:WP_001138042.1;Name=WP_001138042.1;gbkey=CDS;gene=rpsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006714698.1;locus_tag=STY7866_RS25275;product=30S ribosomal protein S7;protein_id=WP_001138042.1;transl_table=11
NZ_CAAR01001389.1	RefSeq	gene	3008	3382	.	-	.	ID=gene-STY7866_RS25280;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=STY7866_RS25280
NZ_CAAR01001389.1	Protein Homology	CDS	3008	3382	.	-	0	ID=cds-WP_000246815.1;Parent=gene-STY7866_RS25280;Dbxref=Genbank:WP_000246815.1;Name=WP_000246815.1;gbkey=CDS;gene=rpsL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312220.1;locus_tag=STY7866_RS25280;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11
NZ_CAAR01001389.1	RefSeq	gene	3508	3795	.	-	.	ID=gene-STY7866_RS25285;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=STY7866_RS25285
NZ_CAAR01001389.1	Protein Homology	CDS	3508	3795	.	-	0	ID=cds-WP_000903398.1;Parent=gene-STY7866_RS25285;Dbxref=Genbank:WP_000903398.1;Name=WP_000903398.1;gbkey=CDS;gene=tusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458451.1;locus_tag=STY7866_RS25285;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903398.1;transl_table=11
NZ_CAAR01001389.1	RefSeq	gene	3803	4159	.	-	.	ID=gene-STY7866_RS25290;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=STY7866_RS25290
NZ_CAAR01001389.1	Protein Homology	CDS	3803	4159	.	-	0	ID=cds-WP_000820707.1;Parent=gene-STY7866_RS25290;Dbxref=Genbank:WP_000820707.1;Name=WP_000820707.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458450.1;locus_tag=STY7866_RS25290;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820707.1;transl_table=11
NZ_CAAR01001389.1	RefSeq	gene	4159	4545	.	-	.	ID=gene-STY7866_RS25295;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=STY7866_RS25295
NZ_CAAR01001389.1	Protein Homology	CDS	4159	4545	.	-	0	ID=cds-WP_001268013.1;Parent=gene-STY7866_RS25295;Dbxref=Genbank:WP_001268013.1;Name=WP_001268013.1;gbkey=CDS;gene=tusD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458449.1;locus_tag=STY7866_RS25295;product=sulfurtransferase complex subunit TusD;protein_id=WP_001268013.1;transl_table=11
NZ_CAAR01001389.1	RefSeq	gene	4545	5267	.	-	.	ID=gene-STY7866_RS25300;Name=STY7866_RS25300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25300
NZ_CAAR01001389.1	Protein Homology	CDS	4545	5267	.	-	0	ID=cds-WP_000091471.1;Parent=gene-STY7866_RS25300;Dbxref=Genbank:WP_000091471.1;Name=WP_000091471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458448.1;locus_tag=STY7866_RS25300;product=transcriptional regulator;protein_id=WP_000091471.1;transl_table=11
NZ_CAAR01001389.1	RefSeq	gene	5544	6362	.	-	.	ID=gene-STY7866_RS25305;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=STY7866_RS25305
NZ_CAAR01001389.1	Protein Homology	CDS	5544	6362	.	-	0	ID=cds-WP_000838232.1;Parent=gene-STY7866_RS25305;Dbxref=Genbank:WP_000838232.1;Name=WP_000838232.1;gbkey=CDS;gene=fkpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458447.1;locus_tag=STY7866_RS25305;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838232.1;transl_table=11
NZ_CAAR01001389.1	RefSeq	gene	6582	6800	.	+	.	ID=gene-STY7866_RS25310;Name=STY7866_RS25310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25310
NZ_CAAR01001389.1	Protein Homology	CDS	6582	6800	.	+	0	ID=cds-WP_001152702.1;Parent=gene-STY7866_RS25310;Dbxref=Genbank:WP_001152702.1;Name=WP_001152702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458446.1;locus_tag=STY7866_RS25310;product=protein SlyX;protein_id=WP_001152702.1;transl_table=11
NZ_CAAR01001389.1	RefSeq	gene	6987	7577	.	-	.	ID=gene-STY7866_RS25315;Name=STY7866_RS25315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25315
NZ_CAAR01001389.1	Protein Homology	CDS	6987	7577	.	-	0	ID=cds-WP_000861345.1;Parent=gene-STY7866_RS25315;Dbxref=Genbank:WP_000861345.1;Name=WP_000861345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458445.1;locus_tag=STY7866_RS25315;product=peptidylprolyl isomerase;protein_id=WP_000861345.1;transl_table=11
NZ_CAAR01001389.1	RefSeq	gene	7672	7872	.	-	.	ID=gene-STY7866_RS25320;Name=STY7866_RS25320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25320
NZ_CAAR01001389.1	Protein Homology	CDS	7672	7872	.	-	0	ID=cds-WP_001007735.1;Parent=gene-STY7866_RS25320;Dbxref=Genbank:WP_001007735.1;Name=WP_001007735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458444.1;locus_tag=STY7866_RS25320;product=YheV family putative metal-binding protein;protein_id=WP_001007735.1;transl_table=11
NZ_CAAR01001389.1	RefSeq	gene	7882	9687	.	-	.	ID=gene-STY7866_RS25325;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=STY7866_RS25325
NZ_CAAR01001389.1	Protein Homology	CDS	7882	9687	.	-	0	ID=cds-WP_000398137.1;Parent=gene-STY7866_RS25325;Dbxref=Genbank:WP_000398137.1;Name=WP_000398137.1;gbkey=CDS;gene=kefB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458443.1;locus_tag=STY7866_RS25325;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_000398137.1;transl_table=11
NZ_CAAR01001389.1	RefSeq	gene	9687	10238	.	-	.	ID=gene-STY7866_RS25330;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=STY7866_RS25330
NZ_CAAR01001389.1	Protein Homology	CDS	9687	10238	.	-	0	ID=cds-WP_000081820.1;Parent=gene-STY7866_RS25330;Dbxref=Genbank:WP_000081820.1;Name=WP_000081820.1;gbkey=CDS;gene=kefG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458442.1;locus_tag=STY7866_RS25330;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_000081820.1;transl_table=11
NZ_CAAR01001389.1	RefSeq	gene	10504	12411	.	+	.	ID=gene-STY7866_RS25335;Name=STY7866_RS25335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25335
NZ_CAAR01001389.1	Protein Homology	CDS	10504	12411	.	+	0	ID=cds-WP_000634756.1;Parent=gene-STY7866_RS25335;Dbxref=Genbank:WP_000634756.1;Name=WP_000634756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458441.1;locus_tag=STY7866_RS25335;product=ABC transporter ATP-binding protein;protein_id=WP_000634756.1;transl_table=11
NZ_CAAR01001389.1	RefSeq	gene	12556	12777	.	+	.	ID=gene-STY7866_RS25340;Name=STY7866_RS25340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25340
NZ_CAAR01001389.1	Protein Homology	CDS	12556	12777	.	+	0	ID=cds-WP_001054036.1;Parent=gene-STY7866_RS25340;Dbxref=Genbank:WP_001054036.1;Name=WP_001054036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=STY7866_RS25340;product=LysR family transcriptional regulator;protein_id=WP_001054036.1;transl_table=11
NZ_CAAR01001389.1	RefSeq	gene	12779	13090	.	-	.	ID=gene-STY7866_RS25345;Name=STY7866_RS25345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25345
NZ_CAAR01001389.1	Protein Homology	CDS	12779	13090	.	-	0	ID=cds-WP_000047690.1;Parent=gene-STY7866_RS25345;Dbxref=Genbank:WP_000047690.1;Name=WP_000047690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458439.1;locus_tag=STY7866_RS25345;product=monooxygenase;protein_id=WP_000047690.1;transl_table=11
NZ_CAAR01001389.1	RefSeq	pseudogene	13288	13775	.	+	.	ID=gene-STY7866_RS25350;Name=STY7866_RS25350;end_range=13775,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25350;partial=true;pseudo=true
NZ_CAAR01001389.1	Protein Homology	CDS	13288	13775	.	+	0	ID=cds-STY7866_RS25350;Parent=gene-STY7866_RS25350;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=13775,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=STY7866_RS25350;partial=true;product=hydrolase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001388.1 1 1025
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001388.1	RefSeq	region	1	1025	.	+	.	ID=NZ_CAAR01001388.1:1..1025;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001388.1	RefSeq	pseudogene	3	548	.	-	.	ID=gene-STY7866_RS29735;Name=STY7866_RS29735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29735;pseudo=true
NZ_CAAR01001388.1	Protein Homology	CDS	3	548	.	-	0	ID=cds-STY7866_RS29735;Parent=gene-STY7866_RS29735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001353729.1;locus_tag=STY7866_RS29735;product=elongation factor Tu;pseudo=true;transl_table=11
NZ_CAAR01001388.1	RefSeq	pseudogene	488	1025	.	-	.	ID=gene-STY7866_RS29740;Name=STY7866_RS29740;end_range=1025,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29740;partial=true;pseudo=true
NZ_CAAR01001388.1	Protein Homology	CDS	488	1025	.	-	0	ID=cds-STY7866_RS29740;Parent=gene-STY7866_RS29740;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=1025,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002249107.1;locus_tag=STY7866_RS29740;partial=true;product=elongation factor Tu;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001387.1 1 178
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001387.1	RefSeq	region	1	178	.	+	.	ID=NZ_CAAR01001387.1:1..178;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001387.1	RefSeq	gene	67	142	.	-	.	ID=gene-STY7866_RS29730;Name=STY7866_RS29730;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS29730
NZ_CAAR01001387.1	tRNAscan-SE	tRNA	67	142	.	-	.	ID=rna-STY7866_RS29730;Parent=gene-STY7866_RS29730;anticodon=(pos:complement(106..108));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS29730;product=tRNA-Glu
NZ_CAAR01001387.1	tRNAscan-SE	exon	67	142	.	-	.	ID=exon-STY7866_RS29730-1;Parent=rna-STY7866_RS29730;anticodon=(pos:complement(106..108));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS29730;product=tRNA-Glu
##sequence-region NZ_CAAR01001386.1 1 275
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001386.1	RefSeq	region	1	275	.	+	.	ID=NZ_CAAR01001386.1:1..275;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001386.1	RefSeq	pseudogene	1	275	.	+	.	ID=gene-STY7866_RS26635;Name=STY7866_RS26635;end_range=275,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26635;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001386.1	Protein Homology	CDS	1	275	.	+	0	ID=cds-STY7866_RS26635;Parent=gene-STY7866_RS26635;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=275,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458709.1;locus_tag=STY7866_RS26635;partial=true;product=oxidoreductase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001385.1 1 498
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001385.1	RefSeq	region	1	498	.	+	.	ID=NZ_CAAR01001385.1:1..498;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001385.1	RefSeq	gene	48	498	.	+	.	ID=gene-STY7866_RS25245;Name=STY7866_RS25245;end_range=498,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25245;partial=true
NZ_CAAR01001385.1	Protein Homology	CDS	48	498	.	+	0	ID=cds-WP_000673503.1;Parent=gene-STY7866_RS25245;Dbxref=Genbank:WP_000673503.1;Name=WP_000673503.1;end_range=498,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461646.1;locus_tag=STY7866_RS25245;partial=true;product=head completion/stabilization protein;protein_id=WP_000673503.1;transl_table=11
##sequence-region NZ_CAAR01001384.1 1 2055
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001384.1	RefSeq	region	1	2055	.	+	.	ID=NZ_CAAR01001384.1:1..2055;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001384.1	RefSeq	gene	1	80	.	+	.	ID=gene-STY7866_RS25220;Name=STY7866_RS25220;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS25220
NZ_CAAR01001384.1	tRNAscan-SE	tRNA	1	80	.	+	.	ID=rna-STY7866_RS25220;Parent=gene-STY7866_RS25220;anticodon=(pos:28..30);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25220;product=tRNA-Leu
NZ_CAAR01001384.1	tRNAscan-SE	exon	1	80	.	+	.	ID=exon-STY7866_RS25220-1;Parent=rna-STY7866_RS25220;anticodon=(pos:28..30);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25220;product=tRNA-Leu
NZ_CAAR01001384.1	RefSeq	gene	112	198	.	+	.	ID=gene-STY7866_RS25225;Name=STY7866_RS25225;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS25225
NZ_CAAR01001384.1	tRNAscan-SE	tRNA	112	198	.	+	.	ID=rna-STY7866_RS25225;Parent=gene-STY7866_RS25225;anticodon=(pos:146..148);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25225;product=tRNA-Leu
NZ_CAAR01001384.1	tRNAscan-SE	exon	112	198	.	+	.	ID=exon-STY7866_RS25225-1;Parent=rna-STY7866_RS25225;anticodon=(pos:146..148);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25225;product=tRNA-Leu
NZ_CAAR01001384.1	RefSeq	gene	230	466	.	-	.	ID=gene-STY7866_RS25230;Name=STY7866_RS25230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25230
NZ_CAAR01001384.1	Protein Homology	CDS	230	466	.	-	0	ID=cds-WP_000941878.1;Parent=gene-STY7866_RS25230;Dbxref=Genbank:WP_000941878.1;Name=WP_000941878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458967.1;locus_tag=STY7866_RS25230;product=DUF1435 domain-containing protein;protein_id=WP_000941878.1;transl_table=11
NZ_CAAR01001384.1	RefSeq	gene	717	1781	.	+	.	ID=gene-STY7866_RS25235;Name=STY7866_RS25235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25235
NZ_CAAR01001384.1	Protein Homology	CDS	717	1781	.	+	0	ID=cds-WP_000211217.1;Parent=gene-STY7866_RS25235;Dbxref=Genbank:WP_000211217.1;Name=WP_000211217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458966.1;locus_tag=STY7866_RS25235;product=GGDEF domain-containing protein;protein_id=WP_000211217.1;transl_table=11
NZ_CAAR01001384.1	RefSeq	pseudogene	1902	2055	.	+	.	ID=gene-STY7866_RS25240;Name=STY7866_RS25240;end_range=2055,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25240;partial=true;pseudo=true
NZ_CAAR01001384.1	Protein Homology	CDS	1902	2055	.	+	0	ID=cds-STY7866_RS25240;Parent=gene-STY7866_RS25240;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2055,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458965.1;locus_tag=STY7866_RS25240;partial=true;product=hydroxamate siderophore iron reductase FhuF;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001383.1 1 1534
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001383.1	RefSeq	region	1	1534	.	+	.	ID=NZ_CAAR01001383.1:1..1534;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001383.1	RefSeq	gene	8	1534	.	-	.	ID=gene-STY7866_RS25215;Name=STY7866_RS25215;end_range=1534,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25215;partial=true
NZ_CAAR01001383.1	Protein Homology	CDS	8	1534	.	-	0	ID=cds-WP_000302998.1;Parent=gene-STY7866_RS25215;Dbxref=Genbank:WP_000302998.1;Name=WP_000302998.1;end_range=1534,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456193.1;locus_tag=STY7866_RS25215;partial=true;product=catalase;protein_id=WP_000302998.1;transl_table=11
##sequence-region NZ_CAAR01001382.1 1 303
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001382.1	RefSeq	region	1	303	.	+	.	ID=NZ_CAAR01001382.1:1..303;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001381.1 1 6649
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001381.1	RefSeq	region	1	6649	.	+	.	ID=NZ_CAAR01001381.1:1..6649;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001381.1	RefSeq	gene	46	1005	.	-	.	ID=gene-STY7866_RS25190;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=STY7866_RS25190
NZ_CAAR01001381.1	Protein Homology	CDS	46	1005	.	-	0	ID=cds-WP_000055753.1;Parent=gene-STY7866_RS25190;Dbxref=Genbank:WP_000055753.1;Name=WP_000055753.1;gbkey=CDS;gene=accA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=STY7866_RS25190;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055753.1;transl_table=11
NZ_CAAR01001381.1	RefSeq	gene	1018	4500	.	-	.	ID=gene-STY7866_RS25195;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=STY7866_RS25195
NZ_CAAR01001381.1	Protein Homology	CDS	1018	4500	.	-	0	ID=cds-WP_001294828.1;Parent=gene-STY7866_RS25195;Dbxref=Genbank:WP_001294828.1;Name=WP_001294828.1;gbkey=CDS;gene=dnaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012815364.1;locus_tag=STY7866_RS25195;product=DNA polymerase III subunit alpha;protein_id=WP_001294828.1;transl_table=11
NZ_CAAR01001381.1	RefSeq	gene	4524	5120	.	-	.	ID=gene-STY7866_RS25200;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=STY7866_RS25200
NZ_CAAR01001381.1	Protein Homology	CDS	4524	5120	.	-	0	ID=cds-WP_000569412.1;Parent=gene-STY7866_RS25200;Dbxref=Genbank:WP_000569412.1;Name=WP_000569412.1;gbkey=CDS;gene=rnhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454837.1;locus_tag=STY7866_RS25200;product=ribonuclease HII;protein_id=WP_000569412.1;transl_table=11
NZ_CAAR01001381.1	RefSeq	gene	5117	6265	.	-	.	ID=gene-STY7866_RS25205;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=STY7866_RS25205
NZ_CAAR01001381.1	Protein Homology	CDS	5117	6265	.	-	0	ID=cds-WP_000741216.1;Parent=gene-STY7866_RS25205;Dbxref=Genbank:WP_000741216.1;Name=WP_000741216.1;gbkey=CDS;gene=lpxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454836.1;locus_tag=STY7866_RS25205;product=lipid-A-disaccharide synthase;protein_id=WP_000741216.1;transl_table=11
NZ_CAAR01001381.1	RefSeq	pseudogene	6265	6649	.	-	.	ID=gene-STY7866_RS25210;Name=STY7866_RS25210;end_range=6649,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25210;partial=true;pseudo=true
NZ_CAAR01001381.1	Protein Homology	CDS	6265	6649	.	-	1	ID=cds-STY7866_RS25210;Parent=gene-STY7866_RS25210;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6649,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454835.1;locus_tag=STY7866_RS25210;partial=true;product=acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001380.1 1 802
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001380.1	RefSeq	region	1	802	.	+	.	ID=NZ_CAAR01001380.1:1..802;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001380.1	RefSeq	pseudogene	1	802	.	+	.	ID=gene-STY7866_RS25185;Name=STY7866_RS25185;end_range=802,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25185;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001380.1	Protein Homology	CDS	1	802	.	+	1	ID=cds-STY7866_RS25185;Parent=gene-STY7866_RS25185;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=802,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458709.1;locus_tag=STY7866_RS25185;partial=true;product=oxidoreductase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001379.1 1 6923
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001379.1	RefSeq	region	1	6923	.	+	.	ID=NZ_CAAR01001379.1:1..6923;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001379.1	RefSeq	gene	1	465	.	-	.	ID=gene-STY7866_RS25150;Name=STY7866_RS25150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25150;partial=true;start_range=.,1
NZ_CAAR01001379.1	Protein Homology	CDS	1	465	.	-	0	ID=cds-WP_001187286.1;Parent=gene-STY7866_RS25150;Dbxref=Genbank:WP_001187286.1;Name=WP_001187286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457213.1;locus_tag=STY7866_RS25150;partial=true;product=MFS transporter;protein_id=WP_001187286.1;start_range=.,1;transl_table=11
NZ_CAAR01001379.1	RefSeq	gene	482	1654	.	-	.	ID=gene-STY7866_RS25155;Name=STY7866_RS25155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25155
NZ_CAAR01001379.1	Protein Homology	CDS	482	1654	.	-	0	ID=cds-WP_001275597.1;Parent=gene-STY7866_RS25155;Dbxref=Genbank:WP_001275597.1;Name=WP_001275597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457212.1;locus_tag=STY7866_RS25155;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001275597.1;transl_table=11
NZ_CAAR01001379.1	RefSeq	gene	1781	2311	.	-	.	ID=gene-STY7866_RS25160;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=STY7866_RS25160
NZ_CAAR01001379.1	Protein Homology	CDS	1781	2311	.	-	0	ID=cds-WP_000378431.1;Parent=gene-STY7866_RS25160;Dbxref=Genbank:WP_000378431.1;Name=WP_000378431.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457211.1;locus_tag=STY7866_RS25160;product=transcriptional repressor MprA;protein_id=WP_000378431.1;transl_table=11
NZ_CAAR01001379.1	RefSeq	gene	2808	3992	.	-	.	ID=gene-STY7866_RS25165;Name=STY7866_RS25165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25165
NZ_CAAR01001379.1	Protein Homology	CDS	2808	3992	.	-	0	ID=cds-WP_000165770.1;Parent=gene-STY7866_RS25165;Dbxref=Genbank:WP_000165770.1;Name=WP_000165770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457210.1;locus_tag=STY7866_RS25165;product=MFS transporter;protein_id=WP_000165770.1;transl_table=11
NZ_CAAR01001379.1	RefSeq	gene	4157	5152	.	-	.	ID=gene-STY7866_RS25170;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=STY7866_RS25170
NZ_CAAR01001379.1	Protein Homology	CDS	4157	5152	.	-	0	ID=cds-WP_001216613.1;Parent=gene-STY7866_RS25170;Dbxref=Genbank:WP_001216613.1;Name=WP_001216613.1;gbkey=CDS;gene=proX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457209.1;locus_tag=STY7866_RS25170;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216613.1;transl_table=11
NZ_CAAR01001379.1	RefSeq	gene	5222	6286	.	-	.	ID=gene-STY7866_RS25175;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=STY7866_RS25175
NZ_CAAR01001379.1	Protein Homology	CDS	5222	6286	.	-	0	ID=cds-WP_000775015.1;Parent=gene-STY7866_RS25175;Dbxref=Genbank:WP_000775015.1;Name=WP_000775015.1;gbkey=CDS;gene=proW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457208.1;locus_tag=STY7866_RS25175;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000775015.1;transl_table=11
NZ_CAAR01001379.1	RefSeq	gene	6279	6923	.	-	.	ID=gene-STY7866_RS25180;Name=proV;end_range=6923,.;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=STY7866_RS25180;partial=true
NZ_CAAR01001379.1	Protein Homology	CDS	6279	6923	.	-	0	ID=cds-WP_001766415.1;Parent=gene-STY7866_RS25180;Dbxref=Genbank:WP_001766415.1;Name=WP_001766415.1;end_range=6923,.;gbkey=CDS;gene=proV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=STY7866_RS25180;partial=true;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_001766415.1;transl_table=11
##sequence-region NZ_CAAR01001378.1 1 9052
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001378.1	RefSeq	region	1	9052	.	+	.	ID=NZ_CAAR01001378.1:1..9052;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001378.1	RefSeq	gene	1	1179	.	+	.	ID=gene-STY7866_RS25100;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=STY7866_RS25100;partial=true;start_range=.,1
NZ_CAAR01001378.1	Protein Homology	CDS	1	1179	.	+	0	ID=cds-WP_000652858.1;Parent=gene-STY7866_RS25100;Dbxref=Genbank:WP_000652858.1;Name=WP_000652858.1;gbkey=CDS;gene=yjeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458767.1;locus_tag=STY7866_RS25100;partial=true;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_000652858.1;start_range=.,1;transl_table=11
NZ_CAAR01001378.1	RefSeq	pseudogene	1238	1715	.	-	.	ID=gene-STY7866_RS25105;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=pseudogene;locus_tag=STY7866_RS25105;pseudo=true
NZ_CAAR01001378.1	Protein Homology	CDS	1238	1715	.	-	0	ID=cds-STY7866_RS25105;Parent=gene-STY7866_RS25105;Note=frameshifted;gbkey=CDS;gene=fxsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458766.1;locus_tag=STY7866_RS25105;product=membrane protein FxsA;pseudo=true;transl_table=11
NZ_CAAR01001378.1	RefSeq	gene	2055	3491	.	+	.	ID=gene-STY7866_RS25115;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=STY7866_RS25115
NZ_CAAR01001378.1	Protein Homology	CDS	2055	3491	.	+	0	ID=cds-WP_000069440.1;Parent=gene-STY7866_RS25115;Dbxref=Genbank:WP_000069440.1;Name=WP_000069440.1;gbkey=CDS;gene=aspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458764.1;locus_tag=STY7866_RS25115;product=aspartate ammonia-lyase;protein_id=WP_000069440.1;transl_table=11
NZ_CAAR01001378.1	RefSeq	gene	3606	4907	.	+	.	ID=gene-STY7866_RS25120;Name=STY7866_RS25120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25120
NZ_CAAR01001378.1	Protein Homology	CDS	3606	4907	.	+	0	ID=cds-WP_000637594.1;Parent=gene-STY7866_RS25120;Dbxref=Genbank:WP_000637594.1;Name=WP_000637594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458763.1;locus_tag=STY7866_RS25120;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_000637594.1;transl_table=11
NZ_CAAR01001378.1	RefSeq	gene	5028	5375	.	+	.	ID=gene-STY7866_RS25125;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=STY7866_RS25125
NZ_CAAR01001378.1	Protein Homology	CDS	5028	5375	.	+	0	ID=cds-WP_000887832.1;Parent=gene-STY7866_RS25125;Dbxref=Genbank:WP_000887832.1;Name=WP_000887832.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458762.1;locus_tag=STY7866_RS25125;product=divalent cation tolerance protein CutA;protein_id=WP_000887832.1;transl_table=11
NZ_CAAR01001378.1	RefSeq	gene	5351	7054	.	+	.	ID=gene-STY7866_RS25130;Name=STY7866_RS25130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25130
NZ_CAAR01001378.1	Protein Homology	CDS	5351	7054	.	+	0	ID=cds-WP_000068881.1;Parent=gene-STY7866_RS25130;Dbxref=Genbank:WP_000068881.1;Name=WP_000068881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458761.1;locus_tag=STY7866_RS25130;product=protein-disulfide reductase DsbD;protein_id=WP_000068881.1;transl_table=11
NZ_CAAR01001378.1	RefSeq	gene	7091	7666	.	+	.	ID=gene-STY7866_RS25135;Name=STY7866_RS25135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25135
NZ_CAAR01001378.1	Protein Homology	CDS	7091	7666	.	+	0	ID=cds-WP_001188510.1;Parent=gene-STY7866_RS25135;Dbxref=Genbank:WP_001188510.1;Name=WP_001188510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458760.1;locus_tag=STY7866_RS25135;product=transcriptional regulator;protein_id=WP_001188510.1;transl_table=11
NZ_CAAR01001378.1	RefSeq	gene	7782	7857	.	+	.	ID=gene-STY7866_RS25140;Name=STY7866_RS25140;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS25140
NZ_CAAR01001378.1	tRNAscan-SE	tRNA	7782	7857	.	+	.	ID=rna-STY7866_RS25140;Parent=gene-STY7866_RS25140;anticodon=(pos:7815..7817);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25140;product=tRNA-Phe
NZ_CAAR01001378.1	tRNAscan-SE	exon	7782	7857	.	+	.	ID=exon-STY7866_RS25140-1;Parent=rna-STY7866_RS25140;anticodon=(pos:7815..7817);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS25140;product=tRNA-Phe
NZ_CAAR01001378.1	RefSeq	gene	8018	9052	.	+	.	ID=gene-STY7866_RS25145;Name=STY7866_RS25145;end_range=9052,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25145;partial=true
NZ_CAAR01001378.1	Protein Homology	CDS	8018	9052	.	+	0	ID=cds-WP_000954534.1;Parent=gene-STY7866_RS25145;Dbxref=Genbank:WP_000954534.1;Name=WP_000954534.1;end_range=9052,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458759.1;locus_tag=STY7866_RS25145;partial=true;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_000954534.1;transl_table=11
##sequence-region NZ_CAAR01001377.1 1 14002
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001377.1	RefSeq	region	1	14002	.	+	.	ID=NZ_CAAR01001377.1:1..14002;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001377.1	RefSeq	gene	1	347	.	+	.	ID=gene-STY7866_RS25025;Name=STY7866_RS25025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25025;partial=true;start_range=.,1
NZ_CAAR01001377.1	Protein Homology	CDS	1	347	.	+	2	ID=cds-WP_000317892.1;Parent=gene-STY7866_RS25025;Dbxref=Genbank:WP_000317892.1;Name=WP_000317892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=STY7866_RS25025;partial=true;product=ABC transporter permease subunit;protein_id=WP_000317892.1;start_range=.,1;transl_table=11
NZ_CAAR01001377.1	RefSeq	gene	350	1420	.	+	.	ID=gene-STY7866_RS25030;Name=STY7866_RS25030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25030
NZ_CAAR01001377.1	Protein Homology	CDS	350	1420	.	+	0	ID=cds-WP_000907851.1;Parent=gene-STY7866_RS25030;Dbxref=Genbank:WP_000907851.1;Name=WP_000907851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458365.1;locus_tag=STY7866_RS25030;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_000907851.1;transl_table=11
NZ_CAAR01001377.1	RefSeq	gene	1417	2157	.	+	.	ID=gene-STY7866_RS25035;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=STY7866_RS25035
NZ_CAAR01001377.1	Protein Homology	CDS	1417	2157	.	+	0	ID=cds-WP_000073552.1;Parent=gene-STY7866_RS25035;Dbxref=Genbank:WP_000073552.1;Name=WP_000073552.1;gbkey=CDS;gene=ugpQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458366.1;locus_tag=STY7866_RS25035;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073552.1;transl_table=11
NZ_CAAR01001377.1	RefSeq	gene	2154	2525	.	-	.	ID=gene-STY7866_RS25040;Name=STY7866_RS25040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25040
NZ_CAAR01001377.1	Protein Homology	CDS	2154	2525	.	-	0	ID=cds-WP_000826039.1;Parent=gene-STY7866_RS25040;Dbxref=Genbank:WP_000826039.1;Name=WP_000826039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458367.1;locus_tag=STY7866_RS25040;product=DUF2756 family protein;protein_id=WP_000826039.1;transl_table=11
NZ_CAAR01001377.1	RefSeq	gene	2651	4393	.	+	.	ID=gene-STY7866_RS25045;Name=STY7866_RS25045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25045
NZ_CAAR01001377.1	Protein Homology	CDS	2651	4393	.	+	0	ID=cds-WP_000805086.1;Parent=gene-STY7866_RS25045;Dbxref=Genbank:WP_000805086.1;Name=WP_000805086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458368.1;locus_tag=STY7866_RS25045;product=gamma-glutamyltransferase;protein_id=WP_000805086.1;transl_table=11
NZ_CAAR01001377.1	RefSeq	gene	4438	5472	.	-	.	ID=gene-STY7866_RS25050;Name=STY7866_RS25050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25050
NZ_CAAR01001377.1	Protein Homology	CDS	4438	5472	.	-	0	ID=cds-WP_000675710.1;Parent=gene-STY7866_RS25050;Dbxref=Genbank:WP_000675710.1;Name=WP_000675710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458369.1;locus_tag=STY7866_RS25050;product=phosphotriesterase;protein_id=WP_000675710.1;transl_table=11
NZ_CAAR01001377.1	RefSeq	gene	5469	6440	.	-	.	ID=gene-STY7866_RS25055;Name=STY7866_RS25055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25055
NZ_CAAR01001377.1	Protein Homology	CDS	5469	6440	.	-	0	ID=cds-WP_001038950.1;Parent=gene-STY7866_RS25055;Dbxref=Genbank:WP_001038950.1;Name=WP_001038950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458370.1;locus_tag=STY7866_RS25055;product=DMT family transporter;protein_id=WP_001038950.1;transl_table=11
NZ_CAAR01001377.1	RefSeq	gene	6494	7255	.	-	.	ID=gene-STY7866_RS25060;Name=STY7866_RS25060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25060
NZ_CAAR01001377.1	Protein Homology	CDS	6494	7255	.	-	0	ID=cds-WP_001066512.1;Parent=gene-STY7866_RS25060;Dbxref=Genbank:WP_001066512.1;Name=WP_001066512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458371.1;locus_tag=STY7866_RS25060;product=hypothetical protein;protein_id=WP_001066512.1;transl_table=11
NZ_CAAR01001377.1	RefSeq	gene	7271	8485	.	-	.	ID=gene-STY7866_RS25065;Name=STY7866_RS25065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25065
NZ_CAAR01001377.1	Protein Homology	CDS	7271	8485	.	-	0	ID=cds-WP_000667442.1;Parent=gene-STY7866_RS25065;Dbxref=Genbank:WP_000667442.1;Name=WP_000667442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458372.1;locus_tag=STY7866_RS25065;product=DeoR family transcriptional regulator;protein_id=WP_000667442.1;transl_table=11
NZ_CAAR01001377.1	RefSeq	gene	8749	9237	.	-	.	ID=gene-STY7866_RS25070;Name=STY7866_RS25070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25070
NZ_CAAR01001377.1	Protein Homology	CDS	8749	9237	.	-	0	ID=cds-WP_001290280.1;Parent=gene-STY7866_RS25070;Dbxref=Genbank:WP_001290280.1;Name=WP_001290280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458373.1;locus_tag=STY7866_RS25070;product=N-acetyltransferase;protein_id=WP_001290280.1;transl_table=11
NZ_CAAR01001377.1	RefSeq	gene	9704	10741	.	+	.	ID=gene-STY7866_RS25075;Name=STY7866_RS25075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25075
NZ_CAAR01001377.1	Protein Homology	CDS	9704	10741	.	+	0	ID=cds-WP_000172399.1;Parent=gene-STY7866_RS25075;Dbxref=Genbank:WP_000172399.1;Name=WP_000172399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458374.1;locus_tag=STY7866_RS25075;product=oxidoreductase;protein_id=WP_000172399.1;transl_table=11
NZ_CAAR01001377.1	RefSeq	gene	10865	11560	.	+	.	ID=gene-STY7866_RS25080;Name=STY7866_RS25080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25080
NZ_CAAR01001377.1	Protein Homology	CDS	10865	11560	.	+	0	ID=cds-WP_000639789.1;Parent=gene-STY7866_RS25080;Dbxref=Genbank:WP_000639789.1;Name=WP_000639789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=STY7866_RS25080;product=pirin family protein;protein_id=WP_000639789.1;transl_table=11
NZ_CAAR01001377.1	RefSeq	gene	11928	12923	.	+	.	ID=gene-STY7866_RS25085;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=STY7866_RS25085
NZ_CAAR01001377.1	Protein Homology	CDS	11928	12923	.	+	0	ID=cds-WP_000730239.1;Parent=gene-STY7866_RS25085;Dbxref=Genbank:WP_000730239.1;Name=WP_000730239.1;gbkey=CDS;gene=gntR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=STY7866_RS25085;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730239.1;transl_table=11
NZ_CAAR01001377.1	RefSeq	gene	13062	13595	.	+	.	ID=gene-STY7866_RS25090;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=STY7866_RS25090
NZ_CAAR01001377.1	Protein Homology	CDS	13062	13595	.	+	0	ID=cds-WP_000108342.1;Parent=gene-STY7866_RS25090;Dbxref=Genbank:WP_000108342.1;Name=WP_000108342.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458377.1;locus_tag=STY7866_RS25090;product=gluconokinase;protein_id=WP_000108342.1;transl_table=11
NZ_CAAR01001377.1	RefSeq	pseudogene	13592	14002	.	+	.	ID=gene-STY7866_RS25095;Name=STY7866_RS25095;end_range=14002,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25095;partial=true;pseudo=true
NZ_CAAR01001377.1	Protein Homology	CDS	13592	14002	.	+	0	ID=cds-STY7866_RS25095;Parent=gene-STY7866_RS25095;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=14002,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458378.1;locus_tag=STY7866_RS25095;partial=true;product=gluconate transporter;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001376.1 1 365
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001376.1	RefSeq	region	1	365	.	+	.	ID=NZ_CAAR01001376.1:1..365;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001376.1	RefSeq	pseudogene	124	365	.	+	.	ID=gene-STY7866_RS25020;Name=STY7866_RS25020;end_range=365,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25020;partial=true;pseudo=true
NZ_CAAR01001376.1	Protein Homology	CDS	124	365	.	+	0	ID=cds-STY7866_RS25020;Parent=gene-STY7866_RS25020;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=365,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457528.1;locus_tag=STY7866_RS25020;partial=true;product=amidohydrolase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001375.1 1 19188
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001375.1	RefSeq	region	1	19188	.	+	.	ID=NZ_CAAR01001375.1:1..19188;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001375.1	RefSeq	gene	444	1841	.	+	.	ID=gene-STY7866_RS24950;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=STY7866_RS24950
NZ_CAAR01001375.1	Protein Homology	CDS	444	1841	.	+	0	ID=cds-WP_000019848.1;Parent=gene-STY7866_RS24950;Dbxref=Genbank:WP_000019848.1;Name=WP_000019848.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455738.1;locus_tag=STY7866_RS24950;product=nitrate transporter NarK;protein_id=WP_000019848.1;transl_table=11
NZ_CAAR01001375.1	RefSeq	gene	2229	5972	.	+	.	ID=gene-STY7866_RS24955;Name=STY7866_RS24955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24955
NZ_CAAR01001375.1	Protein Homology	CDS	2229	5972	.	+	0	ID=cds-WP_000032896.1;Parent=gene-STY7866_RS24955;Dbxref=Genbank:WP_000032896.1;Name=WP_000032896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455739.1;locus_tag=STY7866_RS24955;product=nitrate reductase subunit alpha;protein_id=WP_000032896.1;transl_table=11
NZ_CAAR01001375.1	RefSeq	gene	5969	7513	.	+	.	ID=gene-STY7866_RS24960;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=STY7866_RS24960
NZ_CAAR01001375.1	Protein Homology	CDS	5969	7513	.	+	0	ID=cds-WP_000702518.1;Parent=gene-STY7866_RS24960;Dbxref=Genbank:WP_000702518.1;Name=WP_000702518.1;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455918.1;locus_tag=STY7866_RS24960;product=nitrate reductase subunit beta;protein_id=WP_000702518.1;transl_table=11
NZ_CAAR01001375.1	RefSeq	gene	7513	8208	.	+	.	ID=gene-STY7866_RS24965;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=STY7866_RS24965
NZ_CAAR01001375.1	Protein Homology	CDS	7513	8208	.	+	0	ID=cds-WP_001166289.1;Parent=gene-STY7866_RS24965;Dbxref=Genbank:WP_001166289.1;Name=WP_001166289.1;gbkey=CDS;gene=narW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455917.1;locus_tag=STY7866_RS24965;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166289.1;transl_table=11
NZ_CAAR01001375.1	RefSeq	gene	8205	8885	.	+	.	ID=gene-STY7866_RS24970;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=STY7866_RS24970
NZ_CAAR01001375.1	Protein Homology	CDS	8205	8885	.	+	0	ID=cds-WP_000617102.1;Parent=gene-STY7866_RS24970;Dbxref=Genbank:WP_000617102.1;Name=WP_000617102.1;gbkey=CDS;gene=narI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455916.1;locus_tag=STY7866_RS24970;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617102.1;transl_table=11
NZ_CAAR01001375.1	RefSeq	gene	8991	9884	.	+	.	ID=gene-STY7866_RS24975;Name=STY7866_RS24975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24975
NZ_CAAR01001375.1	Protein Homology	CDS	8991	9884	.	+	0	ID=cds-WP_000804298.1;Parent=gene-STY7866_RS24975;Dbxref=Genbank:WP_000804298.1;Name=WP_000804298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455915.1;locus_tag=STY7866_RS24975;product=PhzF family isomerase;protein_id=WP_000804298.1;transl_table=11
NZ_CAAR01001375.1	RefSeq	gene	9920	10765	.	-	.	ID=gene-STY7866_RS24980;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=STY7866_RS24980
NZ_CAAR01001375.1	Protein Homology	CDS	9920	10765	.	-	0	ID=cds-WP_000200336.1;Parent=gene-STY7866_RS24980;Dbxref=Genbank:WP_000200336.1;Name=WP_000200336.1;gbkey=CDS;gene=nhoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455914.1;locus_tag=STY7866_RS24980;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_000200336.1;transl_table=11
NZ_CAAR01001375.1	RefSeq	gene	11048	11680	.	-	.	ID=gene-STY7866_RS24985;Name=STY7866_RS24985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24985
NZ_CAAR01001375.1	Protein Homology	CDS	11048	11680	.	-	0	ID=cds-WP_001147139.1;Parent=gene-STY7866_RS24985;Dbxref=Genbank:WP_001147139.1;Name=WP_001147139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455913.1;locus_tag=STY7866_RS24985;product=hypothetical protein;protein_id=WP_001147139.1;transl_table=11
NZ_CAAR01001375.1	RefSeq	gene	11745	11957	.	+	.	ID=gene-STY7866_RS29725;Name=STY7866_RS29725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29725
NZ_CAAR01001375.1	Protein Homology	CDS	11745	11957	.	+	0	ID=cds-WP_012218798.1;Parent=gene-STY7866_RS29725;Dbxref=Genbank:WP_012218798.1;Name=WP_012218798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752143.1;locus_tag=STY7866_RS29725;product=hypothetical protein;protein_id=WP_012218798.1;transl_table=11
NZ_CAAR01001375.1	RefSeq	gene	12193	13686	.	+	.	ID=gene-STY7866_RS24990;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=STY7866_RS24990
NZ_CAAR01001375.1	Protein Homology	CDS	12193	13686	.	+	0	ID=cds-WP_000857102.1;Parent=gene-STY7866_RS24990;Dbxref=Genbank:WP_000857102.1;Name=WP_000857102.1;gbkey=CDS;gene=ansP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455912.1;locus_tag=STY7866_RS24990;product=L-asparagine permease;protein_id=WP_000857102.1;transl_table=11
NZ_CAAR01001375.1	RefSeq	gene	13763	13984	.	-	.	ID=gene-STY7866_RS24995;Name=STY7866_RS24995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24995
NZ_CAAR01001375.1	Protein Homology	CDS	13763	13984	.	-	0	ID=cds-WP_000732362.1;Parent=gene-STY7866_RS24995;Dbxref=Genbank:WP_000732362.1;Name=WP_000732362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455911.1;locus_tag=STY7866_RS24995;product=YgdI/YgdR family lipoprotein;protein_id=WP_000732362.1;transl_table=11
NZ_CAAR01001375.1	RefSeq	gene	14129	15178	.	-	.	ID=gene-STY7866_RS25000;Name=STY7866_RS25000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25000
NZ_CAAR01001375.1	Protein Homology	CDS	14129	15178	.	-	0	ID=cds-WP_031626561.1;Parent=gene-STY7866_RS25000;Dbxref=Genbank:WP_031626561.1;Name=WP_031626561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017488.1;locus_tag=STY7866_RS25000;product=YncE family protein;protein_id=WP_031626561.1;transl_table=11
NZ_CAAR01001375.1	RefSeq	pseudogene	15455	17574	.	+	.	ID=gene-STY7866_RS25005;Name=STY7866_RS25005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25005;pseudo=true
NZ_CAAR01001375.1	Protein Homology	CDS	15455	17574	.	+	0	ID=cds-STY7866_RS25005;Parent=gene-STY7866_RS25005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455909.1;locus_tag=STY7866_RS25005;product=TonB-dependent receptor;pseudo=true;transl_table=11
NZ_CAAR01001375.1	RefSeq	gene	17630	18295	.	-	.	ID=gene-STY7866_RS25010;Name=STY7866_RS25010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS25010
NZ_CAAR01001375.1	Protein Homology	CDS	17630	18295	.	-	0	ID=cds-WP_001119592.1;Parent=gene-STY7866_RS25010;Dbxref=Genbank:WP_001119592.1;Name=WP_001119592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455908.1;locus_tag=STY7866_RS25010;product=GntR family transcriptional regulator;protein_id=WP_001119592.1;transl_table=11
NZ_CAAR01001375.1	RefSeq	pseudogene	18629	19188	.	-	.	ID=gene-STY7866_RS25015;Name=STY7866_RS25015;end_range=19188,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS25015;partial=true;pseudo=true
NZ_CAAR01001375.1	Protein Homology	CDS	18629	19188	.	-	2	ID=cds-STY7866_RS25015;Parent=gene-STY7866_RS25015;Note=internal stop%3B incomplete%3B missing N-terminus;end_range=19188,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455907.1;locus_tag=STY7866_RS25015;partial=true;product=zinc-binding dehydrogenase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001374.1 1 4704
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001374.1	RefSeq	region	1	4704	.	+	.	ID=NZ_CAAR01001374.1:1..4704;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001374.1	RefSeq	pseudogene	1	107	.	+	.	ID=gene-STY7866_RS29710;Name=STY7866_RS29710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29710;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001374.1	Protein Homology	CDS	1	107	.	+	2	ID=cds-STY7866_RS29710;Parent=gene-STY7866_RS29710;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455743.1;locus_tag=STY7866_RS29710;partial=true;product=sel1 repeat family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001374.1	RefSeq	gene	209	339	.	-	.	ID=gene-STY7866_RS26625;Name=STY7866_RS26625;gbkey=Gene;gene_biotype=ncRNA;locus_tag=STY7866_RS26625
NZ_CAAR01001374.1	cmsearch	ncRNA	209	339	.	-	.	ID=rna-STY7866_RS26625;Parent=gene-STY7866_RS26625;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS26625;product=RtT sRNA
NZ_CAAR01001374.1	cmsearch	exon	209	339	.	-	.	ID=exon-STY7866_RS26625-1;Parent=rna-STY7866_RS26625;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS26625;product=RtT sRNA
NZ_CAAR01001374.1	RefSeq	gene	390	530	.	-	.	ID=gene-STY7866_RS26630;Name=STY7866_RS26630;gbkey=Gene;gene_biotype=ncRNA;locus_tag=STY7866_RS26630
NZ_CAAR01001374.1	cmsearch	ncRNA	390	530	.	-	.	ID=rna-STY7866_RS26630;Parent=gene-STY7866_RS26630;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS26630;product=RtT sRNA
NZ_CAAR01001374.1	cmsearch	exon	390	530	.	-	.	ID=exon-STY7866_RS26630-1;Parent=rna-STY7866_RS26630;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS26630;product=RtT sRNA
NZ_CAAR01001374.1	RefSeq	gene	570	711	.	-	.	ID=gene-STY7866_RS29715;Name=STY7866_RS29715;gbkey=Gene;gene_biotype=ncRNA;locus_tag=STY7866_RS29715
NZ_CAAR01001374.1	cmsearch	ncRNA	570	711	.	-	.	ID=rna-STY7866_RS29715;Parent=gene-STY7866_RS29715;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS29715;product=RtT sRNA
NZ_CAAR01001374.1	cmsearch	exon	570	711	.	-	.	ID=exon-STY7866_RS29715-1;Parent=rna-STY7866_RS29715;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS29715;product=RtT sRNA
NZ_CAAR01001374.1	RefSeq	gene	882	1724	.	-	.	ID=gene-STY7866_RS24905;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=STY7866_RS24905
NZ_CAAR01001374.1	Protein Homology	CDS	882	1724	.	-	0	ID=cds-WP_001191159.1;Parent=gene-STY7866_RS24905;Dbxref=Genbank:WP_001191159.1;Name=WP_001191159.1;gbkey=CDS;gene=purU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784958.1;locus_tag=STY7866_RS24905;product=formyltetrahydrofolate deformylase;protein_id=WP_001191159.1;transl_table=11
NZ_CAAR01001374.1	RefSeq	pseudogene	1775	2233	.	-	.	ID=gene-STY7866_RS24910;Name=STY7866_RS24910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS24910;pseudo=true
NZ_CAAR01001374.1	Protein Homology	CDS	1775	2233	.	-	0	ID=cds-STY7866_RS24910;Parent=gene-STY7866_RS24910;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=STY7866_RS24910;product=YchJ family protein;pseudo=true;transl_table=11
NZ_CAAR01001374.1	RefSeq	gene	2342	3247	.	+	.	ID=gene-STY7866_RS24915;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=STY7866_RS24915
NZ_CAAR01001374.1	Protein Homology	CDS	2342	3247	.	+	0	ID=cds-WP_001230576.1;Parent=gene-STY7866_RS24915;Dbxref=Genbank:WP_001230576.1;Name=WP_001230576.1;gbkey=CDS;gene=rssA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455746.1;locus_tag=STY7866_RS24915;product=patatin-like phospholipase RssA;protein_id=WP_001230576.1;transl_table=11
NZ_CAAR01001374.1	RefSeq	gene	3338	4351	.	+	.	ID=gene-STY7866_RS24920;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=STY7866_RS24920
NZ_CAAR01001374.1	Protein Homology	CDS	3338	4351	.	+	0	ID=cds-WP_000193432.1;Parent=gene-STY7866_RS24920;Dbxref=Genbank:WP_000193432.1;Name=WP_000193432.1;gbkey=CDS;gene=rssB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455747.1;locus_tag=STY7866_RS24920;product=two-component system response regulator RssB;protein_id=WP_000193432.1;transl_table=11
NZ_CAAR01001374.1	RefSeq	pseudogene	4554	4704	.	+	.	ID=gene-STY7866_RS29720;Name=STY7866_RS29720;end_range=4704,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29720;partial=true;pseudo=true
NZ_CAAR01001374.1	Protein Homology	CDS	4554	4704	.	+	0	ID=cds-STY7866_RS29720;Parent=gene-STY7866_RS29720;Note=together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4704,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455748.1;locus_tag=STY7866_RS29720;partial=true;product=UTP--glucose-1-phosphate uridylyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001373.1 1 175
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001373.1	RefSeq	region	1	175	.	+	.	ID=NZ_CAAR01001373.1:1..175;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001372.1 1 8759
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001372.1	RefSeq	region	1	8759	.	+	.	ID=NZ_CAAR01001372.1:1..8759;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001372.1	RefSeq	gene	6	1238	.	+	.	ID=gene-STY7866_RS24850;Name=STY7866_RS24850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24850
NZ_CAAR01001372.1	Protein Homology	CDS	6	1238	.	+	0	ID=cds-WP_151260024.1;Parent=gene-STY7866_RS24850;Dbxref=Genbank:WP_151260024.1;Name=WP_151260024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000349814.1;locus_tag=STY7866_RS24850;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_151260024.1;transl_table=11
NZ_CAAR01001372.1	RefSeq	gene	1423	2562	.	+	.	ID=gene-STY7866_RS24855;Name=STY7866_RS24855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24855
NZ_CAAR01001372.1	Protein Homology	CDS	1423	2562	.	+	0	ID=cds-WP_001173729.1;Parent=gene-STY7866_RS24855;Dbxref=Genbank:WP_001173729.1;Name=WP_001173729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457084.1;locus_tag=STY7866_RS24855;product=3-phenylpropionate MFS transporter;protein_id=WP_001173729.1;transl_table=11
NZ_CAAR01001372.1	RefSeq	gene	2557	3834	.	-	.	ID=gene-STY7866_RS24860;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=STY7866_RS24860
NZ_CAAR01001372.1	Protein Homology	CDS	2557	3834	.	-	0	ID=cds-WP_000982954.1;Parent=gene-STY7866_RS24860;Dbxref=Genbank:WP_000982954.1;Name=WP_000982954.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457083.1;locus_tag=STY7866_RS24860;product=stationary phase inducible protein CsiE;protein_id=WP_000982954.1;transl_table=11
NZ_CAAR01001372.1	RefSeq	gene	3960	4598	.	+	.	ID=gene-STY7866_RS24865;Name=STY7866_RS24865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24865
NZ_CAAR01001372.1	Protein Homology	CDS	3960	4598	.	+	0	ID=cds-WP_000805721.1;Parent=gene-STY7866_RS24865;Dbxref=Genbank:WP_000805721.1;Name=WP_000805721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457082.1;locus_tag=STY7866_RS24865;product=DUF1007 family protein;protein_id=WP_000805721.1;transl_table=11
NZ_CAAR01001372.1	RefSeq	pseudogene	4589	5574	.	+	.	ID=gene-STY7866_RS24870;Name=STY7866_RS24870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS24870;pseudo=true
NZ_CAAR01001372.1	Protein Homology	CDS	4589	5574	.	+	0	ID=cds-STY7866_RS24870;Parent=gene-STY7866_RS24870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=STY7866_RS24870;product=nickel/cobalt transporter;pseudo=true;transl_table=11
NZ_CAAR01001372.1	RefSeq	gene	5575	6588	.	-	.	ID=gene-STY7866_RS24875;Name=STY7866_RS24875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24875
NZ_CAAR01001372.1	Protein Homology	CDS	5575	6588	.	-	0	ID=cds-WP_000020685.1;Parent=gene-STY7866_RS24875;Dbxref=Genbank:WP_000020685.1;Name=WP_000020685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457081.1;locus_tag=STY7866_RS24875;product=sulfite reductase subunit C;protein_id=WP_000020685.1;transl_table=11
NZ_CAAR01001372.1	RefSeq	gene	6599	7417	.	-	.	ID=gene-STY7866_RS24880;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=STY7866_RS24880
NZ_CAAR01001372.1	Protein Homology	CDS	6599	7417	.	-	0	ID=cds-WP_000017585.1;Parent=gene-STY7866_RS24880;Dbxref=Genbank:WP_000017585.1;Name=WP_000017585.1;gbkey=CDS;gene=asrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457080.1;locus_tag=STY7866_RS24880;product=anaerobic sulfite reductase subunit B;protein_id=WP_000017585.1;transl_table=11
NZ_CAAR01001372.1	RefSeq	pseudogene	7421	8463	.	-	.	ID=gene-STY7866_RS24885;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=pseudogene;locus_tag=STY7866_RS24885;pseudo=true
NZ_CAAR01001372.1	Protein Homology	CDS	7421	8463	.	-	0	ID=cds-STY7866_RS24885;Parent=gene-STY7866_RS24885;Note=frameshifted;gbkey=CDS;gene=asrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457079.1;locus_tag=STY7866_RS24885;product=anaerobic sulfite reductase subunit A;pseudo=true;transl_table=11
NZ_CAAR01001372.1	RefSeq	pseudogene	8645	8759	.	-	.	ID=gene-STY7866_RS29700;Name=STY7866_RS29700;end_range=8759,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29700;partial=true;pseudo=true
NZ_CAAR01001372.1	Protein Homology	CDS	8645	8759	.	-	1	ID=cds-STY7866_RS29700;Parent=gene-STY7866_RS29700;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=8759,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457078.1;locus_tag=STY7866_RS29700;partial=true;product=alpha/beta hydrolase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001371.1 1 3677
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001371.1	RefSeq	region	1	3677	.	+	.	ID=NZ_CAAR01001371.1:1..3677;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001371.1	RefSeq	pseudogene	47	266	.	-	.	ID=gene-STY7866_RS24825;Name=STY7866_RS24825;end_range=266,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS24825;partial=true;pseudo=true
NZ_CAAR01001371.1	Protein Homology	CDS	47	266	.	-	0	ID=cds-STY7866_RS24825;Parent=gene-STY7866_RS24825;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=266,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004594607.1;locus_tag=STY7866_RS24825;partial=true;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01001371.1	RefSeq	gene	354	2660	.	-	.	ID=gene-STY7866_RS24830;Name=sspH2;gbkey=Gene;gene=sspH2;gene_biotype=protein_coding;locus_tag=STY7866_RS24830
NZ_CAAR01001371.1	Protein Homology	CDS	354	2660	.	-	0	ID=cds-WP_001766399.1;Parent=gene-STY7866_RS24830;Dbxref=Genbank:WP_001766399.1;Name=WP_001766399.1;gbkey=CDS;gene=sspH2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456787.1;locus_tag=STY7866_RS24830;product=SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2;protein_id=WP_001766399.1;transl_table=11
NZ_CAAR01001371.1	RefSeq	gene	2829	3032	.	-	.	ID=gene-STY7866_RS24835;Name=STY7866_RS24835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24835
NZ_CAAR01001371.1	Protein Homology	CDS	2829	3032	.	-	0	ID=cds-WP_001113462.1;Parent=gene-STY7866_RS24835;Dbxref=Genbank:WP_001113462.1;Name=WP_001113462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461185.1;locus_tag=STY7866_RS24835;product=tail protein;protein_id=WP_001113462.1;transl_table=11
NZ_CAAR01001371.1	RefSeq	pseudogene	3329	3677	.	-	.	ID=gene-STY7866_RS24845;Name=STY7866_RS24845;end_range=3677,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS24845;partial=true;pseudo=true
NZ_CAAR01001371.1	Protein Homology	CDS	3329	3677	.	-	1	ID=cds-STY7866_RS24845;Parent=gene-STY7866_RS24845;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3677,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461186.1;locus_tag=STY7866_RS24845;partial=true;product=phage tail protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001370.1 1 3452
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001370.1	RefSeq	region	1	3452	.	+	.	ID=NZ_CAAR01001370.1:1..3452;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001370.1	RefSeq	gene	635	1048	.	+	.	ID=gene-STY7866_RS24800;Name=STY7866_RS24800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24800
NZ_CAAR01001370.1	Protein Homology	CDS	635	1048	.	+	0	ID=cds-WP_000281950.1;Parent=gene-STY7866_RS24800;Dbxref=Genbank:WP_000281950.1;Name=WP_000281950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456279.1;locus_tag=STY7866_RS24800;product=subtilase cytotoxin subunit B;protein_id=WP_000281950.1;transl_table=11
NZ_CAAR01001370.1	RefSeq	gene	1065	1793	.	+	.	ID=gene-STY7866_RS24805;Name=artA;gbkey=Gene;gene=artA;gene_biotype=protein_coding;locus_tag=STY7866_RS24805
NZ_CAAR01001370.1	Protein Homology	CDS	1065	1793	.	+	0	ID=cds-WP_001766395.1;Parent=gene-STY7866_RS24805;Dbxref=Genbank:WP_001766395.1;Name=WP_001766395.1;gbkey=CDS;gene=artA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233073.1;locus_tag=STY7866_RS24805;product=pertussis-like toxin subunit ArtA;protein_id=WP_001766395.1;transl_table=11
NZ_CAAR01001370.1	RefSeq	gene	1985	2527	.	+	.	ID=gene-STY7866_RS24810;Name=STY7866_RS24810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24810
NZ_CAAR01001370.1	Protein Homology	CDS	1985	2527	.	+	0	ID=cds-WP_000158843.1;Parent=gene-STY7866_RS24810;Dbxref=Genbank:WP_000158843.1;Name=WP_000158843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456277.1;locus_tag=STY7866_RS24810;product=glycoside hydrolase family 108 protein;protein_id=WP_000158843.1;transl_table=11
NZ_CAAR01001370.1	RefSeq	pseudogene	2675	3053	.	-	.	ID=gene-STY7866_RS24815;Name=STY7866_RS24815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS24815;pseudo=true
NZ_CAAR01001370.1	Protein Homology	CDS	2675	3053	.	-	0	ID=cds-STY7866_RS24815;Parent=gene-STY7866_RS24815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277616.1;locus_tag=STY7866_RS24815;product=DUF1353 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01001370.1	RefSeq	pseudogene	3126	3452	.	-	.	ID=gene-STY7866_RS24820;Name=cdtB;end_range=3452,.;gbkey=Gene;gene=cdtB;gene_biotype=pseudogene;locus_tag=STY7866_RS24820;partial=true;pseudo=true
NZ_CAAR01001370.1	Protein Homology	CDS	3126	3452	.	-	0	ID=cds-STY7866_RS24820;Parent=gene-STY7866_RS24820;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3452,.;gbkey=CDS;gene=cdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456275.1;locus_tag=STY7866_RS24820;partial=true;product=cytolethal distending toxin S-CDT;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001369.1 1 5913
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001369.1	RefSeq	region	1	5913	.	+	.	ID=NZ_CAAR01001369.1:1..5913;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001369.1	RefSeq	gene	1	969	.	+	.	ID=gene-STY7866_RS24775;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=STY7866_RS24775;partial=true;start_range=.,1
NZ_CAAR01001369.1	Protein Homology	CDS	1	969	.	+	0	ID=cds-WP_000597075.1;Parent=gene-STY7866_RS24775;Dbxref=Genbank:WP_000597075.1;Name=WP_000597075.1;gbkey=CDS;gene=holB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455694.1;locus_tag=STY7866_RS24775;partial=true;product=DNA polymerase III subunit delta';protein_id=WP_000597075.1;start_range=.,1;transl_table=11
NZ_CAAR01001369.1	RefSeq	gene	980	1777	.	+	.	ID=gene-STY7866_RS24780;Name=STY7866_RS24780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24780
NZ_CAAR01001369.1	Protein Homology	CDS	980	1777	.	+	0	ID=cds-WP_000480262.1;Parent=gene-STY7866_RS24780;Dbxref=Genbank:WP_000480262.1;Name=WP_000480262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455695.1;locus_tag=STY7866_RS24780;product=metal-dependent hydrolase;protein_id=WP_000480262.1;transl_table=11
NZ_CAAR01001369.1	RefSeq	gene	2071	3504	.	+	.	ID=gene-STY7866_RS24785;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=STY7866_RS24785
NZ_CAAR01001369.1	Protein Homology	CDS	2071	3504	.	+	0	ID=cds-WP_000475735.1;Parent=gene-STY7866_RS24785;Dbxref=Genbank:WP_000475735.1;Name=WP_000475735.1;gbkey=CDS;gene=ptsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475698.1;locus_tag=STY7866_RS24785;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475735.1;transl_table=11
NZ_CAAR01001369.1	RefSeq	pseudogene	3589	5764	.	-	.	ID=gene-STY7866_RS24790;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=pseudogene;locus_tag=STY7866_RS24790;pseudo=true
NZ_CAAR01001369.1	Protein Homology	CDS	3589	5764	.	-	0	ID=cds-STY7866_RS24790;Parent=gene-STY7866_RS24790;Note=frameshifted;gbkey=CDS;gene=fhuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=STY7866_RS24790;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001368.1 1 5940
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001368.1	RefSeq	region	1	5940	.	+	.	ID=NZ_CAAR01001368.1:1..5940;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001368.1	RefSeq	gene	4	1104	.	-	.	ID=gene-STY7866_RS24740;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=STY7866_RS24740
NZ_CAAR01001368.1	Protein Homology	CDS	4	1104	.	-	0	ID=cds-WP_000148419.1;Parent=gene-STY7866_RS24740;Dbxref=Genbank:WP_000148419.1;Name=WP_000148419.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455732.1;locus_tag=STY7866_RS24740;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000148419.1;transl_table=11
NZ_CAAR01001368.1	RefSeq	gene	1371	1601	.	+	.	ID=gene-STY7866_RS24745;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=STY7866_RS24745
NZ_CAAR01001368.1	Protein Homology	CDS	1371	1601	.	+	0	ID=cds-WP_001146392.1;Parent=gene-STY7866_RS24745;Dbxref=Genbank:WP_001146392.1;Name=WP_001146392.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455733.1;locus_tag=STY7866_RS24745;product=putative cation transport regulator ChaB;protein_id=WP_001146392.1;transl_table=11
NZ_CAAR01001368.1	RefSeq	gene	1681	2034	.	-	.	ID=gene-STY7866_RS24750;Name=STY7866_RS24750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24750
NZ_CAAR01001368.1	Protein Homology	CDS	1681	2034	.	-	0	ID=cds-WP_001179794.1;Parent=gene-STY7866_RS24750;Dbxref=Genbank:WP_001179794.1;Name=WP_001179794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455734.1;locus_tag=STY7866_RS24750;product=hypothetical protein;protein_id=WP_001179794.1;transl_table=11
NZ_CAAR01001368.1	RefSeq	gene	2211	3635	.	+	.	ID=gene-STY7866_RS24755;Name=STY7866_RS24755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24755
NZ_CAAR01001368.1	Protein Homology	CDS	2211	3635	.	+	0	ID=cds-WP_024131181.1;Parent=gene-STY7866_RS24755;Dbxref=Genbank:WP_024131181.1;Name=WP_024131181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=STY7866_RS24755;product=YchO/YchP family invasin;protein_id=WP_024131181.1;transl_table=11
NZ_CAAR01001368.1	RefSeq	gene	3636	4286	.	-	.	ID=gene-STY7866_RS24760;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=STY7866_RS24760
NZ_CAAR01001368.1	Protein Homology	CDS	3636	4286	.	-	0	ID=cds-WP_001064595.1;Parent=gene-STY7866_RS24760;Dbxref=Genbank:WP_001064595.1;Name=WP_001064595.1;gbkey=CDS;gene=narL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455736.1;locus_tag=STY7866_RS24760;product=two-component system response regulator NarL;protein_id=WP_001064595.1;transl_table=11
NZ_CAAR01001368.1	RefSeq	pseudogene	4279	5940	.	-	.	ID=gene-STY7866_RS24770;Name=narX;end_range=5940,.;gbkey=Gene;gene=narX;gene_biotype=pseudogene;locus_tag=STY7866_RS24770;partial=true;pseudo=true
NZ_CAAR01001368.1	Protein Homology	CDS	4279	5940	.	-	1	ID=cds-STY7866_RS24770;Parent=gene-STY7866_RS24770;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=5940,.;gbkey=CDS;gene=narX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455737.1;locus_tag=STY7866_RS24770;partial=true;product=nitrate/nitrite two-component system sensor histidine kinase NarX;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001367.1 1 3336
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001367.1	RefSeq	region	1	3336	.	+	.	ID=NZ_CAAR01001367.1:1..3336;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001367.1	RefSeq	pseudogene	23	1196	.	+	.	ID=gene-STY7866_RS24720;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=pseudogene;locus_tag=STY7866_RS24720;pseudo=true
NZ_CAAR01001367.1	Protein Homology	CDS	23	1196	.	+	0	ID=cds-STY7866_RS24720;Parent=gene-STY7866_RS24720;Note=frameshifted;gbkey=CDS;gene=cgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457680.1;locus_tag=STY7866_RS24720;product=Obg family GTPase CgtA;pseudo=true;transl_table=11
NZ_CAAR01001367.1	RefSeq	gene	1327	2760	.	-	.	ID=gene-STY7866_RS24725;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=STY7866_RS24725
NZ_CAAR01001367.1	Protein Homology	CDS	1327	2760	.	-	0	ID=cds-WP_001212675.1;Parent=gene-STY7866_RS24725;Dbxref=Genbank:WP_001212675.1;Name=WP_001212675.1;gbkey=CDS;gene=dacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1;locus_tag=STY7866_RS24725;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001212675.1;transl_table=11
NZ_CAAR01001367.1	RefSeq	gene	3008	3336	.	+	.	ID=gene-STY7866_RS24735;Name=greA;end_range=3336,.;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=STY7866_RS24735;partial=true
NZ_CAAR01001367.1	Protein Homology	CDS	3008	3336	.	+	0	ID=cds-WP_001148006.1;Parent=gene-STY7866_RS24735;Dbxref=Genbank:WP_001148006.1;Name=WP_001148006.1;end_range=3336,.;gbkey=CDS;gene=greA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=STY7866_RS24735;partial=true;product=transcription elongation factor GreA;protein_id=WP_001148006.1;transl_table=11
##sequence-region NZ_CAAR01001366.1 1 4610
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001366.1	RefSeq	region	1	4610	.	+	.	ID=NZ_CAAR01001366.1:1..4610;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001366.1	RefSeq	pseudogene	1	104	.	+	.	ID=gene-STY7866_RS29695;Name=STY7866_RS29695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29695;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001366.1	Protein Homology	CDS	1	104	.	+	2	ID=cds-STY7866_RS29695;Parent=gene-STY7866_RS29695;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457875.1;locus_tag=STY7866_RS29695;partial=true;product=LysB family phage lysis regulatory protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001366.1	RefSeq	gene	200	631	.	+	.	ID=gene-STY7866_RS24685;Name=STY7866_RS24685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24685
NZ_CAAR01001366.1	Protein Homology	CDS	200	631	.	+	0	ID=cds-WP_001039939.1;Parent=gene-STY7866_RS24685;Dbxref=Genbank:WP_001039939.1;Name=WP_001039939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457876.1;locus_tag=STY7866_RS24685;product=phage tail protein;protein_id=WP_001039939.1;transl_table=11
NZ_CAAR01001366.1	RefSeq	gene	624	1070	.	+	.	ID=gene-STY7866_RS24690;Name=STY7866_RS24690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24690
NZ_CAAR01001366.1	Protein Homology	CDS	624	1070	.	+	0	ID=cds-WP_000829146.1;Parent=gene-STY7866_RS24690;Dbxref=Genbank:WP_000829146.1;Name=WP_000829146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457877.1;locus_tag=STY7866_RS24690;product=phage virion morphogenesis protein;protein_id=WP_000829146.1;transl_table=11
NZ_CAAR01001366.1	RefSeq	gene	1139	1717	.	+	.	ID=gene-STY7866_RS24695;Name=STY7866_RS24695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24695
NZ_CAAR01001366.1	Protein Homology	CDS	1139	1717	.	+	0	ID=cds-WP_000993754.1;Parent=gene-STY7866_RS24695;Dbxref=Genbank:WP_000993754.1;Name=WP_000993754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457878.1;locus_tag=STY7866_RS24695;product=phage baseplate assembly protein V;protein_id=WP_000993754.1;transl_table=11
NZ_CAAR01001366.1	RefSeq	gene	1714	2073	.	+	.	ID=gene-STY7866_RS24700;Name=STY7866_RS24700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24700
NZ_CAAR01001366.1	Protein Homology	CDS	1714	2073	.	+	0	ID=cds-WP_000177595.1;Parent=gene-STY7866_RS24700;Dbxref=Genbank:WP_000177595.1;Name=WP_000177595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457879.1;locus_tag=STY7866_RS24700;product=baseplate assembly protein;protein_id=WP_000177595.1;transl_table=11
NZ_CAAR01001366.1	RefSeq	gene	2060	2968	.	+	.	ID=gene-STY7866_RS24705;Name=STY7866_RS24705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24705
NZ_CAAR01001366.1	Protein Homology	CDS	2060	2968	.	+	0	ID=cds-WP_000268271.1;Parent=gene-STY7866_RS24705;Dbxref=Genbank:WP_000268271.1;Name=WP_000268271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457880.1;locus_tag=STY7866_RS24705;product=baseplate assembly protein;protein_id=WP_000268271.1;transl_table=11
NZ_CAAR01001366.1	RefSeq	gene	2961	3566	.	+	.	ID=gene-STY7866_RS24710;Name=STY7866_RS24710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24710
NZ_CAAR01001366.1	Protein Homology	CDS	2961	3566	.	+	0	ID=cds-WP_001086816.1;Parent=gene-STY7866_RS24710;Dbxref=Genbank:WP_001086816.1;Name=WP_001086816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457881.1;locus_tag=STY7866_RS24710;product=phage tail protein I;protein_id=WP_001086816.1;transl_table=11
NZ_CAAR01001366.1	RefSeq	gene	3563	4610	.	+	.	ID=gene-STY7866_RS24715;Name=STY7866_RS24715;end_range=4610,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24715;partial=true
NZ_CAAR01001366.1	Protein Homology	CDS	3563	4610	.	+	0	ID=cds-WP_000104802.1;Parent=gene-STY7866_RS24715;Dbxref=Genbank:WP_000104802.1;Name=WP_000104802.1;end_range=4610,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457882.1;locus_tag=STY7866_RS24715;partial=true;product=hypothetical protein;protein_id=WP_000104802.1;transl_table=11
##sequence-region NZ_CAAR01001365.1 1 1718
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001365.1	RefSeq	region	1	1718	.	+	.	ID=NZ_CAAR01001365.1:1..1718;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001365.1	RefSeq	gene	416	829	.	+	.	ID=gene-STY7866_RS24670;Name=STY7866_RS24670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24670
NZ_CAAR01001365.1	Protein Homology	CDS	416	829	.	+	0	ID=cds-WP_001287383.1;Parent=gene-STY7866_RS24670;Dbxref=Genbank:WP_001287383.1;Name=WP_001287383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455749.1;locus_tag=STY7866_RS24670;product=DNA-binding transcriptional regulator H-NS;protein_id=WP_001287383.1;transl_table=11
NZ_CAAR01001365.1	RefSeq	gene	960	1718	.	-	.	ID=gene-STY7866_RS24680;Name=galU;end_range=1718,.;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=STY7866_RS24680;partial=true
NZ_CAAR01001365.1	Protein Homology	CDS	960	1718	.	-	0	ID=cds-WP_000000260.1;Parent=gene-STY7866_RS24680;Dbxref=Genbank:WP_000000260.1;Name=WP_000000260.1;end_range=1718,.;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455748.1;locus_tag=STY7866_RS24680;partial=true;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000000260.1;transl_table=11
##sequence-region NZ_CAAR01001364.1 1 9583
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001364.1	RefSeq	region	1	9583	.	+	.	ID=NZ_CAAR01001364.1:1..9583;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001364.1	RefSeq	gene	1	535	.	-	.	ID=gene-STY7866_RS29675;Name=STY7866_RS29675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29675;partial=true;start_range=.,1
NZ_CAAR01001364.1	Protein Homology	CDS	1	535	.	-	0	ID=cds-WP_151260022.1;Parent=gene-STY7866_RS29675;Dbxref=Genbank:WP_151260022.1;Name=WP_151260022.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01757.20;locus_tag=STY7866_RS29675;partial=true;product=acyltransferase family protein;protein_id=WP_151260022.1;start_range=.,1;transl_table=11
NZ_CAAR01001364.1	RefSeq	gene	696	872	.	-	.	ID=gene-STY7866_RS29680;Name=STY7866_RS29680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29680
NZ_CAAR01001364.1	Protein Homology	CDS	696	872	.	-	0	ID=cds-WP_151260023.1;Parent=gene-STY7866_RS29680;Dbxref=Genbank:WP_151260023.1;Name=WP_151260023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641436.1;locus_tag=STY7866_RS29680;product=acyltransferase family protein;protein_id=WP_151260023.1;transl_table=11
NZ_CAAR01001364.1	RefSeq	gene	911	1132	.	+	.	ID=gene-STY7866_RS29685;Name=STY7866_RS29685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29685
NZ_CAAR01001364.1	Protein Homology	CDS	911	1132	.	+	0	ID=cds-WP_071525112.1;Parent=gene-STY7866_RS29685;Dbxref=Genbank:WP_071525112.1;Name=WP_071525112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219346.1;locus_tag=STY7866_RS29685;product=hypothetical protein;protein_id=WP_071525112.1;transl_table=11
NZ_CAAR01001364.1	RefSeq	gene	1038	1340	.	+	.	ID=gene-STY7866_RS24615;Name=STY7866_RS24615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24615
NZ_CAAR01001364.1	Protein Homology	CDS	1038	1340	.	+	0	ID=cds-WP_000605592.1;Parent=gene-STY7866_RS24615;Dbxref=Genbank:WP_000605592.1;Name=WP_000605592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458269.1;locus_tag=STY7866_RS24615;product=lipoprotein;protein_id=WP_000605592.1;transl_table=11
NZ_CAAR01001364.1	RefSeq	pseudogene	1479	2389	.	+	.	ID=gene-STY7866_RS24620;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=pseudogene;locus_tag=STY7866_RS24620;pseudo=true
NZ_CAAR01001364.1	Protein Homology	CDS	1479	2389	.	+	0	ID=cds-STY7866_RS24620;Parent=gene-STY7866_RS24620;Note=frameshifted;gbkey=CDS;gene=glyQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458270.1;locus_tag=STY7866_RS24620;product=glycine--tRNA ligase subunit alpha;pseudo=true;transl_table=11
NZ_CAAR01001364.1	RefSeq	gene	2399	4468	.	+	.	ID=gene-STY7866_RS24625;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=STY7866_RS24625
NZ_CAAR01001364.1	Protein Homology	CDS	2399	4468	.	+	0	ID=cds-WP_001291805.1;Parent=gene-STY7866_RS24625;Dbxref=Genbank:WP_001291805.1;Name=WP_001291805.1;gbkey=CDS;gene=glyS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=STY7866_RS24625;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291805.1;transl_table=11
NZ_CAAR01001364.1	RefSeq	gene	5065	5286	.	+	.	ID=gene-STY7866_RS29690;Name=STY7866_RS29690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29690
NZ_CAAR01001364.1	Protein Homology	CDS	5065	5286	.	+	0	ID=cds-WP_024131228.1;Parent=gene-STY7866_RS29690;Dbxref=Genbank:WP_024131228.1;Name=WP_024131228.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13333.4;locus_tag=STY7866_RS29690;product=IS3 family transposase;protein_id=WP_024131228.1;transl_table=11
NZ_CAAR01001364.1	RefSeq	gene	5428	5895	.	+	.	ID=gene-STY7866_RS24635;Name=STY7866_RS24635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24635
NZ_CAAR01001364.1	Protein Homology	CDS	5428	5895	.	+	0	ID=cds-WP_000702452.1;Parent=gene-STY7866_RS24635;Dbxref=Genbank:WP_000702452.1;Name=WP_000702452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458272.1;locus_tag=STY7866_RS24635;product=GNAT family N-acetyltransferase;protein_id=WP_000702452.1;transl_table=11
NZ_CAAR01001364.1	RefSeq	gene	6073	6360	.	+	.	ID=gene-STY7866_RS24640;Name=STY7866_RS24640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24640
NZ_CAAR01001364.1	Protein Homology	CDS	6073	6360	.	+	0	ID=cds-WP_000965889.1;Parent=gene-STY7866_RS24640;Dbxref=Genbank:WP_000965889.1;Name=WP_000965889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458273.1;locus_tag=STY7866_RS24640;product=DUF1778 domain-containing protein;protein_id=WP_000965889.1;transl_table=11
NZ_CAAR01001364.1	RefSeq	gene	6348	6833	.	+	.	ID=gene-STY7866_RS24645;Name=STY7866_RS24645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24645
NZ_CAAR01001364.1	Protein Homology	CDS	6348	6833	.	+	0	ID=cds-WP_000533908.1;Parent=gene-STY7866_RS24645;Dbxref=Genbank:WP_000533908.1;Name=WP_000533908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458274.1;locus_tag=STY7866_RS24645;product=GNAT family N-acetyltransferase;protein_id=WP_000533908.1;transl_table=11
NZ_CAAR01001364.1	RefSeq	gene	7204	7743	.	-	.	ID=gene-STY7866_RS24650;Name=STY7866_RS24650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24650
NZ_CAAR01001364.1	Protein Homology	CDS	7204	7743	.	-	0	ID=cds-WP_000047148.1;Parent=gene-STY7866_RS24650;Dbxref=Genbank:WP_000047148.1;Name=WP_000047148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458275.1;locus_tag=STY7866_RS24650;product=hypothetical protein;protein_id=WP_000047148.1;transl_table=11
NZ_CAAR01001364.1	RefSeq	gene	7918	8130	.	-	.	ID=gene-STY7866_RS24655;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=STY7866_RS24655
NZ_CAAR01001364.1	Protein Homology	CDS	7918	8130	.	-	0	ID=cds-WP_000014594.1;Parent=gene-STY7866_RS24655;Dbxref=Genbank:WP_000014594.1;Name=WP_000014594.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=STY7866_RS24655;product=RNA chaperone/antiterminator CspA;protein_id=WP_000014594.1;transl_table=11
NZ_CAAR01001364.1	RefSeq	gene	8343	8708	.	-	.	ID=gene-STY7866_RS24660;Name=STY7866_RS24660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24660
NZ_CAAR01001364.1	Protein Homology	CDS	8343	8708	.	-	0	ID=cds-WP_000455793.1;Parent=gene-STY7866_RS24660;Dbxref=Genbank:WP_000455793.1;Name=WP_000455793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000455793.1;locus_tag=STY7866_RS24660;product=HTH-type transcriptional regulator;protein_id=WP_000455793.1;transl_table=11
NZ_CAAR01001364.1	RefSeq	gene	9146	9583	.	+	.	ID=gene-STY7866_RS24665;Name=STY7866_RS24665;end_range=9583,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24665;partial=true
NZ_CAAR01001364.1	Protein Homology	CDS	9146	9583	.	+	0	ID=cds-WP_000190521.1;Parent=gene-STY7866_RS24665;Dbxref=Genbank:WP_000190521.1;Name=WP_000190521.1;end_range=9583,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458278.1;locus_tag=STY7866_RS24665;partial=true;product=DUF3053 family protein;protein_id=WP_000190521.1;transl_table=11
##sequence-region NZ_CAAR01001363.1 1 2544
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001363.1	RefSeq	region	1	2544	.	+	.	ID=NZ_CAAR01001363.1:1..2544;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001363.1	RefSeq	gene	1	182	.	+	.	ID=gene-STY7866_RS29670;Name=STY7866_RS29670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29670;partial=true;start_range=.,1
NZ_CAAR01001363.1	Protein Homology	CDS	1	182	.	+	2	ID=cds-WP_001766385.1;Parent=gene-STY7866_RS29670;Dbxref=Genbank:WP_001766385.1;Name=WP_001766385.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00384.20;locus_tag=STY7866_RS29670;partial=true;product=molybdopterin-dependent oxidoreductase;protein_id=WP_001766385.1;start_range=.,1;transl_table=11
NZ_CAAR01001363.1	RefSeq	gene	179	1324	.	+	.	ID=gene-STY7866_RS24600;Name=STY7866_RS24600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24600
NZ_CAAR01001363.1	Protein Homology	CDS	179	1324	.	+	0	ID=cds-WP_001766386.1;Parent=gene-STY7866_RS24600;Dbxref=Genbank:WP_001766386.1;Name=WP_001766386.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01568.19;locus_tag=STY7866_RS24600;product=nitrate reductase subunit alpha;protein_id=WP_001766386.1;transl_table=11
NZ_CAAR01001363.1	RefSeq	gene	1321	2544	.	+	.	ID=gene-STY7866_RS24605;Name=narH;end_range=2544,.;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=STY7866_RS24605;partial=true
NZ_CAAR01001363.1	Protein Homology	CDS	1321	2544	.	+	0	ID=cds-WP_000702627.1;Parent=gene-STY7866_RS24605;Dbxref=Genbank:WP_000702627.1;Name=WP_000702627.1;end_range=2544,.;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455740.1;locus_tag=STY7866_RS24605;partial=true;product=nitrate reductase subunit beta;protein_id=WP_000702627.1;transl_table=11
##sequence-region NZ_CAAR01001362.1 1 5319
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001362.1	RefSeq	region	1	5319	.	+	.	ID=NZ_CAAR01001362.1:1..5319;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001362.1	RefSeq	gene	43	1386	.	-	.	ID=gene-STY7866_RS24580;Name=STY7866_RS24580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24580
NZ_CAAR01001362.1	Protein Homology	CDS	43	1386	.	-	0	ID=cds-WP_000934974.1;Parent=gene-STY7866_RS24580;Dbxref=Genbank:WP_000934974.1;Name=WP_000934974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458844.1;locus_tag=STY7866_RS24580;product=HlyC/CorC family transporter;protein_id=WP_000934974.1;transl_table=11
NZ_CAAR01001362.1	RefSeq	gene	1576	2205	.	-	.	ID=gene-STY7866_RS24585;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=STY7866_RS24585
NZ_CAAR01001362.1	Protein Homology	CDS	1576	2205	.	-	0	ID=cds-WP_031626557.1;Parent=gene-STY7866_RS24585;Dbxref=Genbank:WP_031626557.1;Name=WP_031626557.1;gbkey=CDS;gene=msrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458845.1;locus_tag=STY7866_RS24585;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_031626557.1;transl_table=11
NZ_CAAR01001362.1	RefSeq	gene	2426	4159	.	+	.	ID=gene-STY7866_RS24590;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=STY7866_RS24590
NZ_CAAR01001362.1	Protein Homology	CDS	2426	4159	.	+	0	ID=cds-WP_001120231.1;Parent=gene-STY7866_RS24590;Dbxref=Genbank:WP_001120231.1;Name=WP_001120231.1;gbkey=CDS;gene=tamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458846.1;locus_tag=STY7866_RS24590;product=autotransporter assembly complex protein TamA;protein_id=WP_001120231.1;transl_table=11
NZ_CAAR01001362.1	RefSeq	pseudogene	4156	5319	.	+	.	ID=gene-STY7866_RS24595;Name=tamB;end_range=5319,.;gbkey=Gene;gene=tamB;gene_biotype=pseudogene;locus_tag=STY7866_RS24595;partial=true;pseudo=true
NZ_CAAR01001362.1	Protein Homology	CDS	4156	5319	.	+	0	ID=cds-STY7866_RS24595;Parent=gene-STY7866_RS24595;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5319,.;gbkey=CDS;gene=tamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458847.1;locus_tag=STY7866_RS24595;partial=true;product=autotransporter assembly complex protein TamB;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001361.1 1 177
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001361.1	RefSeq	region	1	177	.	+	.	ID=NZ_CAAR01001361.1:1..177;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001360.1 1 5219
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001360.1	RefSeq	region	1	5219	.	+	.	ID=NZ_CAAR01001360.1:1..5219;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001360.1	RefSeq	gene	59	286	.	-	.	ID=gene-STY7866_RS29660;Name=STY7866_RS29660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29660
NZ_CAAR01001360.1	GeneMarkS-2+	CDS	59	286	.	-	0	ID=cds-WP_071525129.1;Parent=gene-STY7866_RS29660;Dbxref=Genbank:WP_071525129.1;Name=WP_071525129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=STY7866_RS29660;product=hypothetical protein;protein_id=WP_071525129.1;transl_table=11
NZ_CAAR01001360.1	RefSeq	gene	494	1522	.	+	.	ID=gene-STY7866_RS24555;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=STY7866_RS24555
NZ_CAAR01001360.1	Protein Homology	CDS	494	1522	.	+	0	ID=cds-WP_000201028.1;Parent=gene-STY7866_RS24555;Dbxref=Genbank:WP_000201028.1;Name=WP_000201028.1;gbkey=CDS;gene=galR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457406.1;locus_tag=STY7866_RS24555;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201028.1;transl_table=11
NZ_CAAR01001360.1	RefSeq	gene	1533	2555	.	+	.	ID=gene-STY7866_RS24560;Name=STY7866_RS24560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24560
NZ_CAAR01001360.1	Protein Homology	CDS	1533	2555	.	+	0	ID=cds-WP_000968342.1;Parent=gene-STY7866_RS24560;Dbxref=Genbank:WP_000968342.1;Name=WP_000968342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457407.1;locus_tag=STY7866_RS24560;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000968342.1;transl_table=11
NZ_CAAR01001360.1	RefSeq	gene	2565	3827	.	-	.	ID=gene-STY7866_RS24565;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=STY7866_RS24565
NZ_CAAR01001360.1	Protein Homology	CDS	2565	3827	.	-	0	ID=cds-WP_000056585.1;Parent=gene-STY7866_RS24565;Dbxref=Genbank:WP_000056585.1;Name=WP_000056585.1;gbkey=CDS;gene=lysA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457408.1;locus_tag=STY7866_RS24565;product=diaminopimelate decarboxylase;protein_id=WP_000056585.1;transl_table=11
NZ_CAAR01001360.1	RefSeq	gene	3945	4880	.	+	.	ID=gene-STY7866_RS24570;Name=STY7866_RS24570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24570
NZ_CAAR01001360.1	Protein Homology	CDS	3945	4880	.	+	0	ID=cds-WP_000741798.1;Parent=gene-STY7866_RS24570;Dbxref=Genbank:WP_000741798.1;Name=WP_000741798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457409.1;locus_tag=STY7866_RS24570;product=LysR family transcriptional regulator;protein_id=WP_000741798.1;transl_table=11
NZ_CAAR01001360.1	RefSeq	gene	4852	5219	.	-	.	ID=gene-STY7866_RS26615;Name=STY7866_RS26615;end_range=5219,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26615;partial=true
NZ_CAAR01001360.1	Protein Homology	CDS	4852	5219	.	-	2	ID=cds-WP_000300779.1;Parent=gene-STY7866_RS26615;Dbxref=Genbank:WP_000300779.1;Name=WP_000300779.1;end_range=5219,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457410.1;locus_tag=STY7866_RS26615;partial=true;product=amino acid racemase;protein_id=WP_000300779.1;transl_table=11
##sequence-region NZ_CAAR01001359.1 1 532
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001359.1	RefSeq	region	1	532	.	+	.	ID=NZ_CAAR01001359.1:1..532;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001359.1	RefSeq	pseudogene	1	532	.	+	.	ID=gene-STY7866_RS24550;Name=STY7866_RS24550;end_range=532,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS24550;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001359.1	Protein Homology	CDS	1	532	.	+	2	ID=cds-STY7866_RS24550;Parent=gene-STY7866_RS24550;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=532,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=STY7866_RS24550;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001358.1 1 230
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001358.1	RefSeq	region	1	230	.	+	.	ID=NZ_CAAR01001358.1:1..230;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001358.1	RefSeq	pseudogene	1	230	.	-	.	ID=gene-STY7866_RS24545;Name=STY7866_RS24545;end_range=230,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS24545;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001358.1	Protein Homology	CDS	1	230	.	-	1	ID=cds-STY7866_RS24545;Parent=gene-STY7866_RS24545;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=230,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458633.1;locus_tag=STY7866_RS24545;partial=true;product=pilus assembly protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001357.1 1 137
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001357.1	RefSeq	region	1	137	.	+	.	ID=NZ_CAAR01001357.1:1..137;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001356.1 1 1434
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001356.1	RefSeq	region	1	1434	.	+	.	ID=NZ_CAAR01001356.1:1..1434;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001356.1	RefSeq	gene	1	653	.	-	.	ID=gene-STY7866_RS24535;Name=STY7866_RS24535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24535;partial=true;start_range=.,1
NZ_CAAR01001356.1	Protein Homology	CDS	1	653	.	-	0	ID=cds-WP_000956918.1;Parent=gene-STY7866_RS24535;Dbxref=Genbank:WP_000956918.1;Name=WP_000956918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457474.1;locus_tag=STY7866_RS24535;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_000956918.1;start_range=.,1;transl_table=11
NZ_CAAR01001356.1	RefSeq	gene	647	1330	.	-	.	ID=gene-STY7866_RS24540;Name=STY7866_RS24540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24540
NZ_CAAR01001356.1	Protein Homology	CDS	647	1330	.	-	0	ID=cds-WP_000367758.1;Parent=gene-STY7866_RS24540;Dbxref=Genbank:WP_000367758.1;Name=WP_000367758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457473.1;locus_tag=STY7866_RS24540;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000367758.1;transl_table=11
NZ_CAAR01001356.1	RefSeq	pseudogene	1312	1434	.	-	.	ID=gene-STY7866_RS29650;Name=STY7866_RS29650;end_range=1434,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29650;partial=true;pseudo=true
NZ_CAAR01001356.1	Protein Homology	CDS	1312	1434	.	-	0	ID=cds-STY7866_RS29650;Parent=gene-STY7866_RS29650;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1434,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457472.1;locus_tag=STY7866_RS29650;partial=true;product=energy-coupling factor transporter transmembrane protein EcfT;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001355.1 1 31306
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001355.1	RefSeq	region	1	31306	.	+	.	ID=NZ_CAAR01001355.1:1..31306;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001355.1	RefSeq	gene	1	230	.	-	.	ID=gene-STY7866_RS24365;Name=STY7866_RS24365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24365;partial=true;start_range=.,1
NZ_CAAR01001355.1	Protein Homology	CDS	1	230	.	-	0	ID=cds-WP_000130421.1;Parent=gene-STY7866_RS24365;Dbxref=Genbank:WP_000130421.1;Name=WP_000130421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131802.1;locus_tag=STY7866_RS24365;partial=true;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_000130421.1;start_range=.,1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	408	1304	.	-	.	ID=gene-STY7866_RS24370;Name=STY7866_RS24370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24370
NZ_CAAR01001355.1	Protein Homology	CDS	408	1304	.	-	0	ID=cds-WP_077905076.1;Parent=gene-STY7866_RS24370;Dbxref=Genbank:WP_077905076.1;Name=WP_077905076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462188.3;locus_tag=STY7866_RS24370;product=U32 family peptidase;protein_id=WP_077905076.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	1295	2290	.	-	.	ID=gene-STY7866_RS24375;Name=STY7866_RS24375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24375
NZ_CAAR01001355.1	Protein Homology	CDS	1295	2290	.	-	0	ID=cds-WP_000421309.1;Parent=gene-STY7866_RS24375;Dbxref=Genbank:WP_000421309.1;Name=WP_000421309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=STY7866_RS24375;product=U32 family peptidase;protein_id=WP_000421309.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	2507	3031	.	+	.	ID=gene-STY7866_RS24380;Name=STY7866_RS24380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24380
NZ_CAAR01001355.1	Protein Homology	CDS	2507	3031	.	+	0	ID=cds-WP_000884720.1;Parent=gene-STY7866_RS24380;Dbxref=Genbank:WP_000884720.1;Name=WP_000884720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457657.1;locus_tag=STY7866_RS24380;product=SCP2 domain-containing protein;protein_id=WP_000884720.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	3025	3528	.	+	.	ID=gene-STY7866_RS24385;Name=STY7866_RS24385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24385
NZ_CAAR01001355.1	Protein Homology	CDS	3025	3528	.	+	0	ID=cds-WP_000908562.1;Parent=gene-STY7866_RS24385;Dbxref=Genbank:WP_000908562.1;Name=WP_000908562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457656.1;locus_tag=STY7866_RS24385;product=N-acetyltransferase;protein_id=WP_000908562.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	3515	3832	.	-	.	ID=gene-STY7866_RS24390;Name=STY7866_RS24390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24390
NZ_CAAR01001355.1	Protein Homology	CDS	3515	3832	.	-	0	ID=cds-WP_000928379.1;Parent=gene-STY7866_RS24390;Dbxref=Genbank:WP_000928379.1;Name=WP_000928379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457655.1;locus_tag=STY7866_RS24390;product=GIY-YIG nuclease family protein;protein_id=WP_000928379.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	3870	4313	.	+	.	ID=gene-STY7866_RS24395;Name=STY7866_RS24395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24395
NZ_CAAR01001355.1	Protein Homology	CDS	3870	4313	.	+	0	ID=cds-WP_000380404.1;Parent=gene-STY7866_RS24395;Dbxref=Genbank:WP_000380404.1;Name=WP_000380404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457654.1;locus_tag=STY7866_RS24395;product=YhbP family protein;protein_id=WP_000380404.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	4293	4811	.	-	.	ID=gene-STY7866_RS24400;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=STY7866_RS24400
NZ_CAAR01001355.1	Protein Homology	CDS	4293	4811	.	-	0	ID=cds-WP_000037599.1;Parent=gene-STY7866_RS24400;Dbxref=Genbank:WP_000037599.1;Name=WP_000037599.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457653.1;locus_tag=STY7866_RS24400;product=protein/nucleic acid deglycase;protein_id=WP_000037599.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	4942	5577	.	+	.	ID=gene-STY7866_RS24405;Name=STY7866_RS24405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24405
NZ_CAAR01001355.1	Protein Homology	CDS	4942	5577	.	+	0	ID=cds-WP_001638995.1;Parent=gene-STY7866_RS24405;Dbxref=Genbank:WP_001638995.1;Name=WP_001638995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457652.1;locus_tag=STY7866_RS24405;product=NAD(P)H-binding protein;protein_id=WP_001638995.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	5644	6219	.	-	.	ID=gene-STY7866_RS24410;Name=yraP;gbkey=Gene;gene=yraP;gene_biotype=protein_coding;locus_tag=STY7866_RS24410
NZ_CAAR01001355.1	Protein Homology	CDS	5644	6219	.	-	0	ID=cds-WP_000643280.1;Parent=gene-STY7866_RS24410;Dbxref=Genbank:WP_000643280.1;Name=WP_000643280.1;gbkey=CDS;gene=yraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457651.1;locus_tag=STY7866_RS24410;product=divisome-associated lipoprotein YraP;protein_id=WP_000643280.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	6229	6819	.	-	.	ID=gene-STY7866_RS24415;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=STY7866_RS24415
NZ_CAAR01001355.1	Protein Homology	CDS	6229	6819	.	-	0	ID=cds-WP_000893483.1;Parent=gene-STY7866_RS24415;Dbxref=Genbank:WP_000893483.1;Name=WP_000893483.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457650.1;locus_tag=STY7866_RS24415;product=DnaA initiator-associating protein DiaA;protein_id=WP_000893483.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	6841	7236	.	-	.	ID=gene-STY7866_RS24420;Name=STY7866_RS24420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24420
NZ_CAAR01001355.1	Protein Homology	CDS	6841	7236	.	-	0	ID=cds-WP_000057282.1;Parent=gene-STY7866_RS24420;Dbxref=Genbank:WP_000057282.1;Name=WP_000057282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457649.1;locus_tag=STY7866_RS24420;product=YraN family protein;protein_id=WP_000057282.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	7194	9245	.	-	.	ID=gene-STY7866_RS24425;Name=STY7866_RS24425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24425
NZ_CAAR01001355.1	Protein Homology	CDS	7194	9245	.	-	0	ID=cds-WP_000249248.1;Parent=gene-STY7866_RS24425;Dbxref=Genbank:WP_000249248.1;Name=WP_000249248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457648.1;locus_tag=STY7866_RS24425;product=penicillin-binding protein activator;protein_id=WP_000249248.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	9309	10172	.	+	.	ID=gene-STY7866_RS24430;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=STY7866_RS24430
NZ_CAAR01001355.1	Protein Homology	CDS	9309	10172	.	+	0	ID=cds-WP_000812294.1;Parent=gene-STY7866_RS24430;Dbxref=Genbank:WP_000812294.1;Name=WP_000812294.1;gbkey=CDS;gene=rsmI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457647.1;locus_tag=STY7866_RS24430;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000812294.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	10330	11103	.	-	.	ID=gene-STY7866_RS24435;Name=STY7866_RS24435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24435
NZ_CAAR01001355.1	Protein Homology	CDS	10330	11103	.	-	0	ID=cds-WP_001083899.1;Parent=gene-STY7866_RS24435;Dbxref=Genbank:WP_001083899.1;Name=WP_001083899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457646.1;locus_tag=STY7866_RS24435;product=DeoR/GlpR transcriptional regulator;protein_id=WP_001083899.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	pseudogene	11214	12255	.	-	.	ID=gene-STY7866_RS24440;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=pseudogene;locus_tag=STY7866_RS24440;pseudo=true
NZ_CAAR01001355.1	Protein Homology	CDS	11214	12255	.	-	0	ID=cds-STY7866_RS24440;Parent=gene-STY7866_RS24440;Note=frameshifted;gbkey=CDS;gene=gatD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457645.1;locus_tag=STY7866_RS24440;product=galactitol-1-phosphate 5-dehydrogenase;pseudo=true;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	12299	13672	.	-	.	ID=gene-STY7866_RS24445;Name=STY7866_RS24445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24445
NZ_CAAR01001355.1	Protein Homology	CDS	12299	13672	.	-	0	ID=cds-WP_000490608.1;Parent=gene-STY7866_RS24445;Dbxref=Genbank:WP_000490608.1;Name=WP_000490608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457644.1;locus_tag=STY7866_RS24445;product=PTS galactitol transporter subunit IIC;protein_id=WP_000490608.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	13676	13960	.	-	.	ID=gene-STY7866_RS24450;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=STY7866_RS24450
NZ_CAAR01001355.1	Protein Homology	CDS	13676	13960	.	-	0	ID=cds-WP_000824293.1;Parent=gene-STY7866_RS24450;Dbxref=Genbank:WP_000824293.1;Name=WP_000824293.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457643.1;locus_tag=STY7866_RS24450;product=PTS galactitol transporter subunit IIB;protein_id=WP_000824293.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	13991	14455	.	-	.	ID=gene-STY7866_RS24455;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=STY7866_RS24455
NZ_CAAR01001355.1	Protein Homology	CDS	13991	14455	.	-	0	ID=cds-WP_000080443.1;Parent=gene-STY7866_RS24455;Dbxref=Genbank:WP_000080443.1;Name=WP_000080443.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457642.1;locus_tag=STY7866_RS24455;product=PTS galactitol transporter subunit IIA;protein_id=WP_000080443.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	pseudogene	14470	15741	.	-	.	ID=gene-STY7866_RS24460;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=pseudogene;locus_tag=STY7866_RS24460;pseudo=true
NZ_CAAR01001355.1	Protein Homology	CDS	14470	15741	.	-	0	ID=cds-STY7866_RS24460;Parent=gene-STY7866_RS24460;Note=internal stop;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=STY7866_RS24460;product=tagatose-bisphosphate aldolase subunit GatZ;pseudo=true;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	15939	16745	.	-	.	ID=gene-STY7866_RS24465;Name=STY7866_RS24465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24465
NZ_CAAR01001355.1	Protein Homology	CDS	15939	16745	.	-	0	ID=cds-WP_001175238.1;Parent=gene-STY7866_RS24465;Dbxref=Genbank:WP_001175238.1;Name=WP_001175238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457641.1;locus_tag=STY7866_RS24465;product=HPr family phosphocarrier protein;protein_id=WP_001175238.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	16732	18159	.	-	.	ID=gene-STY7866_RS24470;Name=STY7866_RS24470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24470
NZ_CAAR01001355.1	Protein Homology	CDS	16732	18159	.	-	0	ID=cds-WP_000719918.1;Parent=gene-STY7866_RS24470;Dbxref=Genbank:WP_000719918.1;Name=WP_000719918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457640.1;locus_tag=STY7866_RS24470;product=PTS transporter subunit EIIC;protein_id=WP_000719918.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	18186	19100	.	-	.	ID=gene-STY7866_RS24475;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=STY7866_RS24475
NZ_CAAR01001355.1	Protein Homology	CDS	18186	19100	.	-	0	ID=cds-WP_001763021.1;Parent=gene-STY7866_RS24475;Dbxref=Genbank:WP_001763021.1;Name=WP_001763021.1;gbkey=CDS;gene=pfkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457639.1;locus_tag=STY7866_RS24475;product=1-phosphofructokinase;protein_id=WP_001763021.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	19111	19965	.	-	.	ID=gene-STY7866_RS24480;Name=STY7866_RS24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24480
NZ_CAAR01001355.1	Protein Homology	CDS	19111	19965	.	-	0	ID=cds-WP_000469985.1;Parent=gene-STY7866_RS24480;Dbxref=Genbank:WP_000469985.1;Name=WP_000469985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457638.1;locus_tag=STY7866_RS24480;product=tagatose bisphosphate family class II aldolase;protein_id=WP_000469985.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	20299	21132	.	+	.	ID=gene-STY7866_RS24485;Name=STY7866_RS24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24485
NZ_CAAR01001355.1	Protein Homology	CDS	20299	21132	.	+	0	ID=cds-WP_001118366.1;Parent=gene-STY7866_RS24485;Dbxref=Genbank:WP_001118366.1;Name=WP_001118366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991997.1;locus_tag=STY7866_RS24485;product=DeoR/GlpR transcriptional regulator;protein_id=WP_001118366.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	21143	22090	.	+	.	ID=gene-STY7866_RS24490;Name=STY7866_RS24490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24490
NZ_CAAR01001355.1	Protein Homology	CDS	21143	22090	.	+	0	ID=cds-WP_001027808.1;Parent=gene-STY7866_RS24490;Dbxref=Genbank:WP_001027808.1;Name=WP_001027808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457637.1;locus_tag=STY7866_RS24490;product=sugar kinase;protein_id=WP_001027808.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	22330	23901	.	-	.	ID=gene-STY7866_RS24495;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=STY7866_RS24495
NZ_CAAR01001355.1	Protein Homology	CDS	22330	23901	.	-	0	ID=cds-WP_001273719.1;Parent=gene-STY7866_RS24495;Dbxref=Genbank:WP_001273719.1;Name=WP_001273719.1;gbkey=CDS;gene=garD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457636.1;locus_tag=STY7866_RS24495;product=galactarate dehydratase;protein_id=WP_001273719.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	24432	25202	.	+	.	ID=gene-STY7866_RS24500;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=STY7866_RS24500
NZ_CAAR01001355.1	Protein Homology	CDS	24432	25202	.	+	0	ID=cds-WP_001057715.1;Parent=gene-STY7866_RS24500;Dbxref=Genbank:WP_001057715.1;Name=WP_001057715.1;gbkey=CDS;gene=garL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457635.1;locus_tag=STY7866_RS24500;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001057715.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	pseudogene	25228	26119	.	+	.	ID=gene-STY7866_RS24505;Name=STY7866_RS24505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS24505;pseudo=true
NZ_CAAR01001355.1	Protein Homology	CDS	25228	26119	.	+	0	ID=cds-STY7866_RS24505;Parent=gene-STY7866_RS24505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=STY7866_RS24505;product=2-hydroxy-3-oxopropionate reductase;pseudo=true;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	26217	27362	.	+	.	ID=gene-STY7866_RS24510;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=STY7866_RS24510
NZ_CAAR01001355.1	Protein Homology	CDS	26217	27362	.	+	0	ID=cds-WP_000706461.1;Parent=gene-STY7866_RS24510;Dbxref=Genbank:WP_000706461.1;Name=WP_000706461.1;gbkey=CDS;gene=garK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457633.1;locus_tag=STY7866_RS24510;product=glycerate 2-kinase;protein_id=WP_000706461.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	gene	27395	27769	.	+	.	ID=gene-STY7866_RS26610;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=STY7866_RS26610
NZ_CAAR01001355.1	cmsearch	RNase_P_RNA	27395	27769	.	+	.	ID=rna-STY7866_RS26610;Parent=gene-STY7866_RS26610;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS26610;product=RNase P RNA component class A
NZ_CAAR01001355.1	cmsearch	exon	27395	27769	.	+	.	ID=exon-STY7866_RS26610-1;Parent=rna-STY7866_RS26610;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS26610;product=RNase P RNA component class A
NZ_CAAR01001355.1	RefSeq	gene	28814	29752	.	+	.	ID=gene-STY7866_RS24515;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=STY7866_RS24515
NZ_CAAR01001355.1	Protein Homology	CDS	28814	29752	.	+	0	ID=cds-WP_001094904.1;Parent=gene-STY7866_RS24515;Dbxref=Genbank:WP_001094904.1;Name=WP_001094904.1;gbkey=CDS;gene=tdcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457632.1;locus_tag=STY7866_RS24515;product=transcriptional regulator TdcA;protein_id=WP_001094904.1;transl_table=11
NZ_CAAR01001355.1	RefSeq	pseudogene	29850	30840	.	+	.	ID=gene-STY7866_RS24520;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=pseudogene;locus_tag=STY7866_RS24520;pseudo=true
NZ_CAAR01001355.1	Protein Homology	CDS	29850	30840	.	+	0	ID=cds-STY7866_RS24520;Parent=gene-STY7866_RS24520;Note=frameshifted;gbkey=CDS;gene=tdcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457631.1;locus_tag=STY7866_RS24520;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;pseudo=true;transl_table=11
NZ_CAAR01001355.1	RefSeq	pseudogene	30861	31306	.	+	.	ID=gene-STY7866_RS24525;Name=STY7866_RS24525;end_range=31306,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS24525;partial=true;pseudo=true
NZ_CAAR01001355.1	Protein Homology	CDS	30861	31306	.	+	0	ID=cds-STY7866_RS24525;Parent=gene-STY7866_RS24525;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=31306,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=STY7866_RS24525;partial=true;product=threonine/serine transporter TdcC;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001354.1 1 12619
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001354.1	RefSeq	region	1	12619	.	+	.	ID=NZ_CAAR01001354.1:1..12619;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001354.1	RefSeq	gene	1	1585	.	-	.	ID=gene-STY7866_RS24325;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=STY7866_RS24325;partial=true;start_range=.,1
NZ_CAAR01001354.1	Protein Homology	CDS	1	1585	.	-	0	ID=cds-WP_000082254.1;Parent=gene-STY7866_RS24325;Dbxref=Genbank:WP_000082254.1;Name=WP_000082254.1;gbkey=CDS;gene=glgP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458390.1;locus_tag=STY7866_RS24325;partial=true;product=glycogen/starch/alpha-glucan family phosphorylase;protein_id=WP_000082254.1;start_range=.,1;transl_table=11
NZ_CAAR01001354.1	RefSeq	gene	2179	4884	.	+	.	ID=gene-STY7866_RS24330;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=STY7866_RS24330
NZ_CAAR01001354.1	Protein Homology	CDS	2179	4884	.	+	0	ID=cds-WP_000907046.1;Parent=gene-STY7866_RS24330;Dbxref=Genbank:WP_000907046.1;Name=WP_000907046.1;gbkey=CDS;gene=malT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=STY7866_RS24330;product=HTH-type transcriptional regulator MalT;protein_id=WP_000907046.1;transl_table=11
NZ_CAAR01001354.1	RefSeq	gene	4958	5716	.	-	.	ID=gene-STY7866_RS24335;Name=STY7866_RS24335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24335
NZ_CAAR01001354.1	Protein Homology	CDS	4958	5716	.	-	0	ID=cds-WP_000815087.1;Parent=gene-STY7866_RS24335;Dbxref=Genbank:WP_000815087.1;Name=WP_000815087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=STY7866_RS24335;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815087.1;transl_table=11
NZ_CAAR01001354.1	RefSeq	gene	5809	6639	.	-	.	ID=gene-STY7866_RS24340;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=STY7866_RS24340
NZ_CAAR01001354.1	Protein Homology	CDS	5809	6639	.	-	0	ID=cds-WP_000928705.1;Parent=gene-STY7866_RS24340;Dbxref=Genbank:WP_000928705.1;Name=WP_000928705.1;gbkey=CDS;gene=glpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458387.1;locus_tag=STY7866_RS24340;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928705.1;transl_table=11
NZ_CAAR01001354.1	RefSeq	gene	6715	7041	.	-	.	ID=gene-STY7866_RS24345;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=STY7866_RS24345
NZ_CAAR01001354.1	Protein Homology	CDS	6715	7041	.	-	0	ID=cds-WP_000434523.1;Parent=gene-STY7866_RS24345;Dbxref=Genbank:WP_000434523.1;Name=WP_000434523.1;gbkey=CDS;gene=glpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458386.1;locus_tag=STY7866_RS24345;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000434523.1;transl_table=11
NZ_CAAR01001354.1	RefSeq	gene	7240	8748	.	+	.	ID=gene-STY7866_RS24350;Name=STY7866_RS24350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24350
NZ_CAAR01001354.1	Protein Homology	CDS	7240	8748	.	+	0	ID=cds-WP_000448178.1;Parent=gene-STY7866_RS24350;Dbxref=Genbank:WP_000448178.1;Name=WP_000448178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121613.1;locus_tag=STY7866_RS24350;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_000448178.1;transl_table=11
NZ_CAAR01001354.1	RefSeq	gene	8840	11287	.	-	.	ID=gene-STY7866_RS24355;Name=STY7866_RS24355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24355
NZ_CAAR01001354.1	Protein Homology	CDS	8840	11287	.	-	0	ID=cds-WP_000993423.1;Parent=gene-STY7866_RS24355;Dbxref=Genbank:WP_000993423.1;Name=WP_000993423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=STY7866_RS24355;product=glycogen phosphorylase;protein_id=WP_000993423.1;transl_table=11
NZ_CAAR01001354.1	RefSeq	pseudogene	11307	12619	.	-	.	ID=gene-STY7866_RS24360;Name=glgA;end_range=12619,.;gbkey=Gene;gene=glgA;gene_biotype=pseudogene;locus_tag=STY7866_RS24360;partial=true;pseudo=true
NZ_CAAR01001354.1	Protein Homology	CDS	11307	12619	.	-	0	ID=cds-STY7866_RS24360;Parent=gene-STY7866_RS24360;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=12619,.;gbkey=CDS;gene=glgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458383.1;locus_tag=STY7866_RS24360;partial=true;product=glycogen synthase GlgA;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001353.1 1 11346
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001353.1	RefSeq	region	1	11346	.	+	.	ID=NZ_CAAR01001353.1:1..11346;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001353.1	RefSeq	gene	46	1650	.	+	.	ID=gene-STY7866_RS24270;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=STY7866_RS24270
NZ_CAAR01001353.1	Protein Homology	CDS	46	1650	.	+	0	ID=cds-WP_151260021.1;Parent=gene-STY7866_RS24270;Dbxref=Genbank:WP_151260021.1;Name=WP_151260021.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000349091.1;locus_tag=STY7866_RS24270;product=transcriptional regulator HilA;protein_id=WP_151260021.1;transl_table=11
NZ_CAAR01001353.1	RefSeq	gene	1668	2150	.	+	.	ID=gene-STY7866_RS24275;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=STY7866_RS24275
NZ_CAAR01001353.1	Protein Homology	CDS	1668	2150	.	+	0	ID=cds-WP_000558926.1;Parent=gene-STY7866_RS24275;Dbxref=Genbank:WP_000558926.1;Name=WP_000558926.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457271.1;locus_tag=STY7866_RS24275;product=SPI-1 type III secretion system invasion protein IagB;protein_id=WP_000558926.1;transl_table=11
NZ_CAAR01001353.1	RefSeq	gene	2205	3836	.	-	.	ID=gene-STY7866_RS24280;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=STY7866_RS24280
NZ_CAAR01001353.1	Protein Homology	CDS	2205	3836	.	-	0	ID=cds-WP_000946989.1;Parent=gene-STY7866_RS24280;Dbxref=Genbank:WP_000946989.1;Name=WP_000946989.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457272.1;locus_tag=STY7866_RS24280;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=WP_000946989.1;transl_table=11
NZ_CAAR01001353.1	RefSeq	gene	3823	4215	.	-	.	ID=gene-STY7866_RS24285;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=STY7866_RS24285
NZ_CAAR01001353.1	Protein Homology	CDS	3823	4215	.	-	0	ID=cds-WP_001147850.1;Parent=gene-STY7866_RS24285;Dbxref=Genbank:WP_001147850.1;Name=WP_001147850.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=STY7866_RS24285;product=chaperone SicP;protein_id=WP_001147850.1;transl_table=11
NZ_CAAR01001353.1	RefSeq	gene	4242	4502	.	-	.	ID=gene-STY7866_RS24290;Name=STY7866_RS24290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24290
NZ_CAAR01001353.1	Protein Homology	CDS	4242	4502	.	-	0	ID=cds-WP_000692253.1;Parent=gene-STY7866_RS24290;Dbxref=Genbank:WP_000692253.1;Name=WP_000692253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457274.1;locus_tag=STY7866_RS24290;product=hypothetical protein;protein_id=WP_000692253.1;transl_table=11
NZ_CAAR01001353.1	RefSeq	gene	4546	4794	.	-	.	ID=gene-STY7866_RS24295;Name=STY7866_RS24295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24295
NZ_CAAR01001353.1	Protein Homology	CDS	4546	4794	.	-	0	ID=cds-WP_001055579.1;Parent=gene-STY7866_RS24295;Dbxref=Genbank:WP_001055579.1;Name=WP_001055579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457275.1;locus_tag=STY7866_RS24295;product=acyl carrier protein;protein_id=WP_001055579.1;transl_table=11
NZ_CAAR01001353.1	RefSeq	gene	4813	6870	.	-	.	ID=gene-STY7866_RS24300;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=STY7866_RS24300
NZ_CAAR01001353.1	Protein Homology	CDS	4813	6870	.	-	0	ID=cds-WP_000258814.1;Parent=gene-STY7866_RS24300;Dbxref=Genbank:WP_000258814.1;Name=WP_000258814.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457276.1;locus_tag=STY7866_RS24300;product=SPI-1 type III secretion system effector SipA;protein_id=WP_000258814.1;transl_table=11
NZ_CAAR01001353.1	RefSeq	gene	6889	7911	.	-	.	ID=gene-STY7866_RS24305;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=STY7866_RS24305
NZ_CAAR01001353.1	Protein Homology	CDS	6889	7911	.	-	0	ID=cds-WP_000932243.1;Parent=gene-STY7866_RS24305;Dbxref=Genbank:WP_000932243.1;Name=WP_000932243.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457277.1;locus_tag=STY7866_RS24305;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WP_000932243.1;transl_table=11
NZ_CAAR01001353.1	RefSeq	gene	7982	9211	.	-	.	ID=gene-STY7866_RS24310;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=STY7866_RS24310
NZ_CAAR01001353.1	Protein Homology	CDS	7982	9211	.	-	0	ID=cds-WP_000909023.1;Parent=gene-STY7866_RS24310;Dbxref=Genbank:WP_000909023.1;Name=WP_000909023.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457278.1;locus_tag=STY7866_RS24310;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=WP_000909023.1;transl_table=11
NZ_CAAR01001353.1	RefSeq	gene	9239	11020	.	-	.	ID=gene-STY7866_RS24315;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=STY7866_RS24315
NZ_CAAR01001353.1	Protein Homology	CDS	9239	11020	.	-	0	ID=cds-WP_000245782.1;Parent=gene-STY7866_RS24315;Dbxref=Genbank:WP_000245782.1;Name=WP_000245782.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457279.1;locus_tag=STY7866_RS24315;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WP_000245782.1;transl_table=11
NZ_CAAR01001353.1	RefSeq	pseudogene	11023	11346	.	-	.	ID=gene-STY7866_RS24320;Name=sicA;end_range=11346,.;gbkey=Gene;gene=sicA;gene_biotype=pseudogene;locus_tag=STY7866_RS24320;partial=true;pseudo=true
NZ_CAAR01001353.1	Protein Homology	CDS	11023	11346	.	-	0	ID=cds-STY7866_RS24320;Parent=gene-STY7866_RS24320;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=11346,.;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457280.1;locus_tag=STY7866_RS24320;partial=true;product=type III secretion system translocator chaperone SicA;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001352.1 1 8819
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001352.1	RefSeq	region	1	8819	.	+	.	ID=NZ_CAAR01001352.1:1..8819;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001352.1	RefSeq	gene	1	337	.	-	.	ID=gene-STY7866_RS24215;Name=STY7866_RS24215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24215;partial=true;start_range=.,1
NZ_CAAR01001352.1	Protein Homology	CDS	1	337	.	-	0	ID=cds-WP_000996053.1;Parent=gene-STY7866_RS24215;Dbxref=Genbank:WP_000996053.1;Name=WP_000996053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455405.1;locus_tag=STY7866_RS24215;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_000996053.1;start_range=.,1;transl_table=11
NZ_CAAR01001352.1	RefSeq	pseudogene	425	1538	.	-	.	ID=gene-STY7866_RS24220;Name=potF;gbkey=Gene;gene=potF;gene_biotype=pseudogene;locus_tag=STY7866_RS24220;pseudo=true
NZ_CAAR01001352.1	Protein Homology	CDS	425	1538	.	-	0	ID=cds-STY7866_RS24220;Parent=gene-STY7866_RS24220;Note=frameshifted;gbkey=CDS;gene=potF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455404.1;locus_tag=STY7866_RS24220;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;pseudo=true;transl_table=11
NZ_CAAR01001352.1	RefSeq	gene	1887	2363	.	-	.	ID=gene-STY7866_RS24225;Name=STY7866_RS24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24225
NZ_CAAR01001352.1	Protein Homology	CDS	1887	2363	.	-	0	ID=cds-WP_000624817.1;Parent=gene-STY7866_RS24225;Dbxref=Genbank:WP_000624817.1;Name=WP_000624817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455403.1;locus_tag=STY7866_RS24225;product=YbjN domain-containing protein;protein_id=WP_000624817.1;transl_table=11
NZ_CAAR01001352.1	RefSeq	gene	2460	3362	.	-	.	ID=gene-STY7866_RS24230;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=STY7866_RS24230
NZ_CAAR01001352.1	Protein Homology	CDS	2460	3362	.	-	0	ID=cds-WP_000684361.1;Parent=gene-STY7866_RS24230;Dbxref=Genbank:WP_000684361.1;Name=WP_000684361.1;gbkey=CDS;gene=rimK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455402.1;locus_tag=STY7866_RS24230;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684361.1;transl_table=11
NZ_CAAR01001352.1	RefSeq	gene	3420	4142	.	-	.	ID=gene-STY7866_RS24235;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=STY7866_RS24235
NZ_CAAR01001352.1	Protein Homology	CDS	3420	4142	.	-	0	ID=cds-WP_000075306.1;Parent=gene-STY7866_RS24235;Dbxref=Genbank:WP_000075306.1;Name=WP_000075306.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455401.1;locus_tag=STY7866_RS24235;product=nitroreductase NfsA;protein_id=WP_000075306.1;transl_table=11
NZ_CAAR01001352.1	RefSeq	gene	4126	4416	.	-	.	ID=gene-STY7866_RS24240;Name=STY7866_RS24240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24240
NZ_CAAR01001352.1	Protein Homology	CDS	4126	4416	.	-	0	ID=cds-WP_001259133.1;Parent=gene-STY7866_RS24240;Dbxref=Genbank:WP_001259133.1;Name=WP_001259133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455400.1;locus_tag=STY7866_RS24240;product=YbjC family protein;protein_id=WP_001259133.1;transl_table=11
NZ_CAAR01001352.1	RefSeq	gene	4586	4849	.	+	.	ID=gene-STY7866_RS24245;Name=grxA;gbkey=Gene;gene=grxA;gene_biotype=protein_coding;locus_tag=STY7866_RS24245
NZ_CAAR01001352.1	Protein Homology	CDS	4586	4849	.	+	0	ID=cds-WP_000495513.1;Parent=gene-STY7866_RS24245;Dbxref=Genbank:WP_000495513.1;Name=WP_000495513.1;gbkey=CDS;gene=grxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455399.1;locus_tag=STY7866_RS24245;product=glutaredoxin%2C GrxA family;protein_id=WP_000495513.1;transl_table=11
NZ_CAAR01001352.1	RefSeq	gene	4881	5258	.	-	.	ID=gene-STY7866_RS24250;Name=STY7866_RS24250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24250
NZ_CAAR01001352.1	Protein Homology	CDS	4881	5258	.	-	0	ID=cds-WP_000680848.1;Parent=gene-STY7866_RS24250;Dbxref=Genbank:WP_000680848.1;Name=WP_000680848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455398.1;locus_tag=STY7866_RS24250;product=membrane protein;protein_id=WP_000680848.1;transl_table=11
NZ_CAAR01001352.1	RefSeq	pseudogene	5529	7213	.	+	.	ID=gene-STY7866_RS24255;Name=STY7866_RS24255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS24255;pseudo=true
NZ_CAAR01001352.1	Protein Homology	CDS	5529	7213	.	+	0	ID=cds-STY7866_RS24255;Parent=gene-STY7866_RS24255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=STY7866_RS24255;product=transporter;pseudo=true;transl_table=11
NZ_CAAR01001352.1	RefSeq	pseudogene	7275	7376	.	-	.	ID=gene-STY7866_RS29645;Name=STY7866_RS29645;end_range=7376,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29645;partial=true;pseudo=true
NZ_CAAR01001352.1	Protein Homology	CDS	7275	7376	.	-	0	ID=cds-STY7866_RS29645;Parent=gene-STY7866_RS29645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=7376,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003836939.1;locus_tag=STY7866_RS29645;partial=true;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11
NZ_CAAR01001352.1	RefSeq	gene	7330	7950	.	-	.	ID=gene-STY7866_RS24260;Name=STY7866_RS24260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24260
NZ_CAAR01001352.1	Protein Homology	CDS	7330	7950	.	-	0	ID=cds-WP_000661882.1;Parent=gene-STY7866_RS24260;Dbxref=Genbank:WP_000661882.1;Name=WP_000661882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455396.1;locus_tag=STY7866_RS24260;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000661882.1;transl_table=11
NZ_CAAR01001352.1	RefSeq	gene	8118	8819	.	+	.	ID=gene-STY7866_RS24265;Name=STY7866_RS24265;end_range=8819,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24265;partial=true
NZ_CAAR01001352.1	Protein Homology	CDS	8118	8819	.	+	0	ID=cds-WP_001766373.1;Parent=gene-STY7866_RS24265;Dbxref=Genbank:WP_001766373.1;Name=WP_001766373.1;end_range=8819,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001719274.1;locus_tag=STY7866_RS24265;partial=true;product=hypothetical protein;protein_id=WP_001766373.1;transl_table=11
##sequence-region NZ_CAAR01001351.1 1 726
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001351.1	RefSeq	region	1	726	.	+	.	ID=NZ_CAAR01001351.1:1..726;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001351.1	RefSeq	pseudogene	1	484	.	+	.	ID=gene-STY7866_RS24210;Name=STY7866_RS24210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS24210;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001351.1	Protein Homology	CDS	1	484	.	+	1	ID=cds-STY7866_RS24210;Parent=gene-STY7866_RS24210;Note=serine sensor receptor%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=STY7866_RS24210;partial=true;product=methyl-accepting chemotaxis protein II;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001351.1	RefSeq	pseudogene	653	726	.	-	.	ID=gene-STY7866_RS29640;Name=STY7866_RS29640;end_range=726,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29640;partial=true;pseudo=true
NZ_CAAR01001351.1	Protein Homology	CDS	653	726	.	-	2	ID=cds-STY7866_RS29640;Parent=gene-STY7866_RS29640;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=726,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001601337.1;locus_tag=STY7866_RS29640;partial=true;product=phosphoglycerol transferase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001350.1 1 10754
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001350.1	RefSeq	region	1	10754	.	+	.	ID=NZ_CAAR01001350.1:1..10754;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001350.1	RefSeq	gene	1	181	.	-	.	ID=gene-STY7866_RS26605;Name=STY7866_RS26605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26605;partial=true;start_range=.,1
NZ_CAAR01001350.1	Protein Homology	CDS	1	181	.	-	0	ID=cds-WP_000224023.1;Parent=gene-STY7866_RS26605;Dbxref=Genbank:WP_000224023.1;Name=WP_000224023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748469.1;locus_tag=STY7866_RS26605;partial=true;product=hypothetical protein;protein_id=WP_000224023.1;start_range=.,1;transl_table=11
NZ_CAAR01001350.1	RefSeq	pseudogene	781	1693	.	+	.	ID=gene-STY7866_RS24125;Name=STY7866_RS24125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS24125;pseudo=true
NZ_CAAR01001350.1	Protein Homology	CDS	781	1693	.	+	0	ID=cds-STY7866_RS24125;Parent=gene-STY7866_RS24125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456365.1;locus_tag=STY7866_RS24125;product=DMT family transporter;pseudo=true;transl_table=11
NZ_CAAR01001350.1	RefSeq	gene	1826	1984	.	+	.	ID=gene-STY7866_RS24130;Name=STY7866_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24130
NZ_CAAR01001350.1	Protein Homology	CDS	1826	1984	.	+	0	ID=cds-WP_000480735.1;Parent=gene-STY7866_RS24130;Dbxref=Genbank:WP_000480735.1;Name=WP_000480735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456366.1;locus_tag=STY7866_RS24130;product=hypothetical protein;protein_id=WP_000480735.1;transl_table=11
NZ_CAAR01001350.1	RefSeq	gene	1994	2608	.	+	.	ID=gene-STY7866_RS24135;Name=STY7866_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24135
NZ_CAAR01001350.1	Protein Homology	CDS	1994	2608	.	+	0	ID=cds-WP_000848063.1;Parent=gene-STY7866_RS24135;Dbxref=Genbank:WP_000848063.1;Name=WP_000848063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456367.1;locus_tag=STY7866_RS24135;product=disulfide bond formation protein B;protein_id=WP_000848063.1;transl_table=11
NZ_CAAR01001350.1	RefSeq	gene	2808	2999	.	+	.	ID=gene-STY7866_RS24140;Name=STY7866_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24140
NZ_CAAR01001350.1	Protein Homology	CDS	2808	2999	.	+	0	ID=cds-WP_001540220.1;Parent=gene-STY7866_RS24140;Dbxref=Genbank:WP_001540220.1;Name=WP_001540220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540220.1;locus_tag=STY7866_RS24140;product=hypothetical protein;protein_id=WP_001540220.1;transl_table=11
NZ_CAAR01001350.1	RefSeq	pseudogene	3017	4997	.	-	.	ID=gene-STY7866_RS24145;Name=STY7866_RS24145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS24145;pseudo=true
NZ_CAAR01001350.1	Protein Homology	CDS	3017	4997	.	-	0	ID=cds-STY7866_RS24145;Parent=gene-STY7866_RS24145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456369.1;locus_tag=STY7866_RS24145;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11
NZ_CAAR01001350.1	RefSeq	gene	5392	6522	.	+	.	ID=gene-STY7866_RS24150;Name=STY7866_RS24150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24150
NZ_CAAR01001350.1	Protein Homology	CDS	5392	6522	.	+	0	ID=cds-WP_000529513.1;Parent=gene-STY7866_RS24150;Dbxref=Genbank:WP_000529513.1;Name=WP_000529513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456370.1;locus_tag=STY7866_RS24150;product=GGDEF domain-containing protein;protein_id=WP_000529513.1;transl_table=11
NZ_CAAR01001350.1	RefSeq	pseudogene	6808	7203	.	-	.	ID=gene-STY7866_RS24160;Name=STY7866_RS24160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS24160;pseudo=true
NZ_CAAR01001350.1	Protein Homology	CDS	6808	7203	.	-	0	ID=cds-STY7866_RS24160;Parent=gene-STY7866_RS24160;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089414.1;locus_tag=STY7866_RS24160;product=DUF977 family protein;pseudo=true;transl_table=11
NZ_CAAR01001350.1	RefSeq	pseudogene	7216	7326	.	-	.	ID=gene-STY7866_RS29630;Name=STY7866_RS29630;end_range=7326,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29630;partial=true;pseudo=true
NZ_CAAR01001350.1	Protein Homology	CDS	7216	7326	.	-	0	ID=cds-STY7866_RS29630;Parent=gene-STY7866_RS29630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=7326,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140163.1;locus_tag=STY7866_RS29630;partial=true;product=replication protein;pseudo=true;transl_table=11
NZ_CAAR01001350.1	RefSeq	pseudogene	7327	7688	.	+	.	ID=gene-STY7866_RS29635;Name=recT;end_range=7688,.;gbkey=Gene;gene=recT;gene_biotype=pseudogene;locus_tag=STY7866_RS29635;partial=true;pseudo=true;start_range=.,7327
NZ_CAAR01001350.1	Protein Homology	CDS	7327	7688	.	+	0	ID=cds-STY7866_RS29635;Parent=gene-STY7866_RS29635;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=7688,.;gbkey=CDS;gene=recT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415865.1;locus_tag=STY7866_RS29635;partial=true;product=recombination protein RecT;pseudo=true;start_range=.,7327;transl_table=11
NZ_CAAR01001350.1	RefSeq	gene	7651	7995	.	+	.	ID=gene-STY7866_RS24175;Name=STY7866_RS24175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24175
NZ_CAAR01001350.1	Protein Homology	CDS	7651	7995	.	+	0	ID=cds-WP_072073163.1;Parent=gene-STY7866_RS24175;Dbxref=Genbank:WP_072073163.1;Name=WP_072073163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632910.1;locus_tag=STY7866_RS24175;product=tyrosine-type recombinase/integrase;protein_id=WP_072073163.1;transl_table=11
NZ_CAAR01001350.1	RefSeq	gene	8359	8712	.	-	.	ID=gene-STY7866_RS24185;Name=STY7866_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24185
NZ_CAAR01001350.1	Protein Homology	CDS	8359	8712	.	-	0	ID=cds-WP_000722366.1;Parent=gene-STY7866_RS24185;Dbxref=Genbank:WP_000722366.1;Name=WP_000722366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456441.1;locus_tag=STY7866_RS24185;product=YebY family protein;protein_id=WP_000722366.1;transl_table=11
NZ_CAAR01001350.1	RefSeq	gene	8729	9604	.	-	.	ID=gene-STY7866_RS24190;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=STY7866_RS24190
NZ_CAAR01001350.1	Protein Homology	CDS	8729	9604	.	-	0	ID=cds-WP_000979693.1;Parent=gene-STY7866_RS24190;Dbxref=Genbank:WP_000979693.1;Name=WP_000979693.1;gbkey=CDS;gene=copD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456442.1;locus_tag=STY7866_RS24190;product=copper homeostasis membrane protein CopD;protein_id=WP_000979693.1;transl_table=11
NZ_CAAR01001350.1	RefSeq	gene	9605	9979	.	-	.	ID=gene-STY7866_RS24195;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=STY7866_RS24195
NZ_CAAR01001350.1	Protein Homology	CDS	9605	9979	.	-	0	ID=cds-WP_001681742.1;Parent=gene-STY7866_RS24195;Dbxref=Genbank:WP_001681742.1;Name=WP_001681742.1;gbkey=CDS;gene=yobA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=STY7866_RS24195;product=CopC domain-containing protein YobA;protein_id=WP_001681742.1;transl_table=11
NZ_CAAR01001350.1	RefSeq	gene	10117	10347	.	+	.	ID=gene-STY7866_RS24200;Name=STY7866_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24200
NZ_CAAR01001350.1	Protein Homology	CDS	10117	10347	.	+	0	ID=cds-WP_000856224.1;Parent=gene-STY7866_RS24200;Dbxref=Genbank:WP_000856224.1;Name=WP_000856224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456444.1;locus_tag=STY7866_RS24200;product=DNA polymerase III subunit theta;protein_id=WP_000856224.1;transl_table=11
NZ_CAAR01001350.1	RefSeq	gene	10455	10754	.	+	.	ID=gene-STY7866_RS24205;Name=STY7866_RS24205;end_range=10754,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24205;partial=true
NZ_CAAR01001350.1	Protein Homology	CDS	10455	10754	.	+	0	ID=cds-WP_000100252.1;Parent=gene-STY7866_RS24205;Dbxref=Genbank:WP_000100252.1;Name=WP_000100252.1;end_range=10754,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456445.1;locus_tag=STY7866_RS24205;partial=true;product=hypothetical protein;protein_id=WP_000100252.1;transl_table=11
##sequence-region NZ_CAAR01001349.1 1 8659
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001349.1	RefSeq	region	1	8659	.	+	.	ID=NZ_CAAR01001349.1:1..8659;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001349.1	RefSeq	gene	1	828	.	+	.	ID=gene-STY7866_RS24075;Name=STY7866_RS24075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24075
NZ_CAAR01001349.1	Protein Homology	CDS	1	828	.	+	0	ID=cds-WP_001766358.1;Parent=gene-STY7866_RS24075;Dbxref=Genbank:WP_001766358.1;Name=WP_001766358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766358.1;locus_tag=STY7866_RS24075;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WP_001766358.1;transl_table=11
NZ_CAAR01001349.1	RefSeq	gene	871	1485	.	+	.	ID=gene-STY7866_RS24080;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=STY7866_RS24080
NZ_CAAR01001349.1	Protein Homology	CDS	871	1485	.	+	0	ID=cds-WP_000206559.1;Parent=gene-STY7866_RS24080;Dbxref=Genbank:WP_000206559.1;Name=WP_000206559.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455984.1;locus_tag=STY7866_RS24080;product=Tat proofreading chaperone DmsD;protein_id=WP_000206559.1;transl_table=11
NZ_CAAR01001349.1	RefSeq	gene	1790	2500	.	+	.	ID=gene-STY7866_RS24085;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=STY7866_RS24085
NZ_CAAR01001349.1	Protein Homology	CDS	1790	2500	.	+	0	ID=cds-WP_000547814.1;Parent=gene-STY7866_RS24085;Dbxref=Genbank:WP_000547814.1;Name=WP_000547814.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455985.1;locus_tag=STY7866_RS24085;product=osmoprotectant ABC transporter permease OsmY;protein_id=WP_000547814.1;transl_table=11
NZ_CAAR01001349.1	RefSeq	gene	2529	3431	.	+	.	ID=gene-STY7866_RS24090;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=STY7866_RS24090
NZ_CAAR01001349.1	Protein Homology	CDS	2529	3431	.	+	0	ID=cds-WP_001211196.1;Parent=gene-STY7866_RS24090;Dbxref=Genbank:WP_001211196.1;Name=WP_001211196.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455986.1;locus_tag=STY7866_RS24090;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WP_001211196.1;transl_table=11
NZ_CAAR01001349.1	RefSeq	pseudogene	3441	4087	.	+	.	ID=gene-STY7866_RS24095;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=pseudogene;locus_tag=STY7866_RS24095;pseudo=true
NZ_CAAR01001349.1	Protein Homology	CDS	3441	4087	.	+	0	ID=cds-STY7866_RS24095;Parent=gene-STY7866_RS24095;Note=frameshifted;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504841.1;locus_tag=STY7866_RS24095;product=osmoprotectant ABC transporter permease OsmW;pseudo=true;transl_table=11
NZ_CAAR01001349.1	RefSeq	gene	4087	5235	.	+	.	ID=gene-STY7866_RS24100;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=STY7866_RS24100
NZ_CAAR01001349.1	Protein Homology	CDS	4087	5235	.	+	0	ID=cds-WP_000593099.1;Parent=gene-STY7866_RS24100;Dbxref=Genbank:WP_000593099.1;Name=WP_000593099.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455988.1;locus_tag=STY7866_RS24100;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_000593099.1;transl_table=11
NZ_CAAR01001349.1	RefSeq	gene	5371	6660	.	+	.	ID=gene-STY7866_RS24105;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=STY7866_RS24105
NZ_CAAR01001349.1	Protein Homology	CDS	5371	6660	.	+	0	ID=cds-WP_000554914.1;Parent=gene-STY7866_RS24105;Dbxref=Genbank:WP_000554914.1;Name=WP_000554914.1;gbkey=CDS;gene=clcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455989.3;locus_tag=STY7866_RS24105;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_000554914.1;transl_table=11
NZ_CAAR01001349.1	RefSeq	gene	6616	7311	.	-	.	ID=gene-STY7866_RS24110;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=STY7866_RS24110
NZ_CAAR01001349.1	Protein Homology	CDS	6616	7311	.	-	0	ID=cds-WP_000919236.1;Parent=gene-STY7866_RS24110;Dbxref=Genbank:WP_000919236.1;Name=WP_000919236.1;gbkey=CDS;gene=bioD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455990.1;locus_tag=STY7866_RS24110;product=ATP-dependent dethiobiotin synthetase BioD;protein_id=WP_000919236.1;transl_table=11
NZ_CAAR01001349.1	RefSeq	gene	7437	8657	.	-	.	ID=gene-STY7866_RS24115;Name=STY7866_RS24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24115
NZ_CAAR01001349.1	Protein Homology	CDS	7437	8657	.	-	0	ID=cds-WP_000225088.1;Parent=gene-STY7866_RS24115;Dbxref=Genbank:WP_000225088.1;Name=WP_000225088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=STY7866_RS24115;product=ROK family transcriptional regulator;protein_id=WP_000225088.1;transl_table=11
##sequence-region NZ_CAAR01001348.1 1 16755
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001348.1	RefSeq	region	1	16755	.	+	.	ID=NZ_CAAR01001348.1:1..16755;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001348.1	RefSeq	gene	1	362	.	-	.	ID=gene-STY7866_RS24005;Name=STY7866_RS24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24005;partial=true;start_range=.,1
NZ_CAAR01001348.1	Protein Homology	CDS	1	362	.	-	0	ID=cds-WP_001766354.1;Parent=gene-STY7866_RS24005;Dbxref=Genbank:WP_001766354.1;Name=WP_001766354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458596.1;locus_tag=STY7866_RS24005;partial=true;product=hypothetical protein;protein_id=WP_001766354.1;start_range=.,1;transl_table=11
NZ_CAAR01001348.1	RefSeq	gene	631	1986	.	+	.	ID=gene-STY7866_RS24010;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=STY7866_RS24010
NZ_CAAR01001348.1	Protein Homology	CDS	631	1986	.	+	0	ID=cds-WP_014341547.1;Parent=gene-STY7866_RS24010;Dbxref=Genbank:WP_014341547.1;Name=WP_014341547.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=STY7866_RS24010;product=alpha-galactosidase;protein_id=WP_014341547.1;transl_table=11
NZ_CAAR01001348.1	RefSeq	gene	2070	3500	.	+	.	ID=gene-STY7866_RS24015;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=STY7866_RS24015
NZ_CAAR01001348.1	Protein Homology	CDS	2070	3500	.	+	0	ID=cds-WP_000028072.1;Parent=gene-STY7866_RS24015;Dbxref=Genbank:WP_000028072.1;Name=WP_000028072.1;gbkey=CDS;gene=melB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458598.1;locus_tag=STY7866_RS24015;product=melibiose:sodium transporter MelB;protein_id=WP_000028072.1;transl_table=11
NZ_CAAR01001348.1	RefSeq	gene	3598	5244	.	-	.	ID=gene-STY7866_RS24020;Name=STY7866_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24020
NZ_CAAR01001348.1	Protein Homology	CDS	3598	5244	.	-	0	ID=cds-WP_000037189.1;Parent=gene-STY7866_RS24020;Dbxref=Genbank:WP_000037189.1;Name=WP_000037189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458599.1;locus_tag=STY7866_RS24020;product=class I fumarate hydratase;protein_id=WP_000037189.1;transl_table=11
NZ_CAAR01001348.1	RefSeq	gene	5340	6680	.	-	.	ID=gene-STY7866_RS24025;Name=STY7866_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24025
NZ_CAAR01001348.1	Protein Homology	CDS	5340	6680	.	-	0	ID=cds-WP_000899142.1;Parent=gene-STY7866_RS24025;Dbxref=Genbank:WP_000899142.1;Name=WP_000899142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458600.1;locus_tag=STY7866_RS24025;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_000899142.1;transl_table=11
NZ_CAAR01001348.1	RefSeq	gene	6827	7093	.	-	.	ID=gene-STY7866_RS24030;Name=STY7866_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24030
NZ_CAAR01001348.1	Protein Homology	CDS	6827	7093	.	-	0	ID=cds-WP_001767594.1;Parent=gene-STY7866_RS24030;Dbxref=Genbank:WP_001767594.1;Name=WP_001767594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=STY7866_RS24030;product=hypothetical protein;protein_id=WP_001767594.1;transl_table=11
NZ_CAAR01001348.1	RefSeq	gene	7410	8129	.	-	.	ID=gene-STY7866_RS24035;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=STY7866_RS24035
NZ_CAAR01001348.1	Protein Homology	CDS	7410	8129	.	-	0	ID=cds-WP_000611308.1;Parent=gene-STY7866_RS24035;Dbxref=Genbank:WP_000611308.1;Name=WP_000611308.1;gbkey=CDS;gene=dcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458602.1;locus_tag=STY7866_RS24035;product=two-component system response regulator DcuR;protein_id=WP_000611308.1;transl_table=11
NZ_CAAR01001348.1	RefSeq	gene	8126	9757	.	-	.	ID=gene-STY7866_RS24040;Name=dcuS;gbkey=Gene;gene=dcuS;gene_biotype=protein_coding;locus_tag=STY7866_RS24040
NZ_CAAR01001348.1	Protein Homology	CDS	8126	9757	.	-	0	ID=cds-WP_000682899.1;Parent=gene-STY7866_RS24040;Dbxref=Genbank:WP_000682899.1;Name=WP_000682899.1;gbkey=CDS;gene=dcuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458603.1;locus_tag=STY7866_RS24040;product=two-component system sensor histidine kinase DcuS;protein_id=WP_000682899.1;transl_table=11
NZ_CAAR01001348.1	RefSeq	pseudogene	10129	12539	.	+	.	ID=gene-STY7866_RS24045;Name=STY7866_RS24045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS24045;pseudo=true
NZ_CAAR01001348.1	Protein Homology	CDS	10129	12539	.	+	0	ID=cds-STY7866_RS24045;Parent=gene-STY7866_RS24045;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004396019.1;locus_tag=STY7866_RS24045;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11
NZ_CAAR01001348.1	RefSeq	gene	12553	12948	.	+	.	ID=gene-STY7866_RS29620;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=STY7866_RS29620
NZ_CAAR01001348.1	Protein Homology	CDS	12553	12948	.	+	0	ID=cds-WP_000806547.1;Parent=gene-STY7866_RS29620;Dbxref=Genbank:WP_000806547.1;Name=WP_000806547.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000816140.1;locus_tag=STY7866_RS29620;product=dimethylsulfoxide reductase subunit B;protein_id=WP_000806547.1;transl_table=11
NZ_CAAR01001348.1	RefSeq	gene	12976	13179	.	+	.	ID=gene-STY7866_RS29625;Name=STY7866_RS29625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29625
NZ_CAAR01001348.1	GeneMarkS-2+	CDS	12976	13179	.	+	0	ID=cds-WP_000376549.1;Parent=gene-STY7866_RS29625;Dbxref=Genbank:WP_000376549.1;Name=WP_000376549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=STY7866_RS29625;product=hypothetical protein;protein_id=WP_000376549.1;transl_table=11
NZ_CAAR01001348.1	RefSeq	gene	13172	13945	.	+	.	ID=gene-STY7866_RS24055;Name=STY7866_RS24055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24055
NZ_CAAR01001348.1	Protein Homology	CDS	13172	13945	.	+	0	ID=cds-WP_000544919.1;Parent=gene-STY7866_RS24055;Dbxref=Genbank:WP_000544919.1;Name=WP_000544919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458604.1;locus_tag=STY7866_RS24055;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WP_000544919.1;transl_table=11
NZ_CAAR01001348.1	RefSeq	gene	13960	14613	.	+	.	ID=gene-STY7866_RS24060;Name=STY7866_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24060
NZ_CAAR01001348.1	Protein Homology	CDS	13960	14613	.	+	0	ID=cds-WP_077905085.1;Parent=gene-STY7866_RS24060;Dbxref=Genbank:WP_077905085.1;Name=WP_077905085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463173.1;locus_tag=STY7866_RS24060;product=molecular chaperone;protein_id=WP_077905085.1;transl_table=11
NZ_CAAR01001348.1	RefSeq	gene	14697	16097	.	-	.	ID=gene-STY7866_RS24065;Name=STY7866_RS24065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24065
NZ_CAAR01001348.1	Protein Homology	CDS	14697	16097	.	-	0	ID=cds-WP_000773796.1;Parent=gene-STY7866_RS24065;Dbxref=Genbank:WP_000773796.1;Name=WP_000773796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458606.1;locus_tag=STY7866_RS24065;product=DUF1996 domain-containing protein;protein_id=WP_000773796.1;transl_table=11
NZ_CAAR01001348.1	RefSeq	pseudogene	16401	16755	.	+	.	ID=gene-STY7866_RS24070;Name=STY7866_RS24070;end_range=16755,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS24070;partial=true;pseudo=true
NZ_CAAR01001348.1	Protein Homology	CDS	16401	16755	.	+	0	ID=cds-STY7866_RS24070;Parent=gene-STY7866_RS24070;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=16755,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458607.1;locus_tag=STY7866_RS24070;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001347.1 1 16064
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001347.1	RefSeq	region	1	16064	.	+	.	ID=NZ_CAAR01001347.1:1..16064;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001347.1	RefSeq	gene	1	715	.	-	.	ID=gene-STY7866_RS23945;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=STY7866_RS23945;partial=true;start_range=.,1
NZ_CAAR01001347.1	Protein Homology	CDS	1	715	.	-	0	ID=cds-WP_000080391.1;Parent=gene-STY7866_RS23945;Dbxref=Genbank:WP_000080391.1;Name=WP_000080391.1;gbkey=CDS;gene=cysH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457335.1;locus_tag=STY7866_RS23945;partial=true;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000080391.1;start_range=.,1;transl_table=11
NZ_CAAR01001347.1	RefSeq	gene	791	2503	.	-	.	ID=gene-STY7866_RS23950;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=STY7866_RS23950
NZ_CAAR01001347.1	Protein Homology	CDS	791	2503	.	-	0	ID=cds-WP_001291998.1;Parent=gene-STY7866_RS23950;Dbxref=Genbank:WP_001291998.1;Name=WP_001291998.1;gbkey=CDS;gene=cysI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=STY7866_RS23950;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_001291998.1;transl_table=11
NZ_CAAR01001347.1	RefSeq	gene	2503	4302	.	-	.	ID=gene-STY7866_RS23955;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=STY7866_RS23955
NZ_CAAR01001347.1	Protein Homology	CDS	2503	4302	.	-	0	ID=cds-WP_000210901.1;Parent=gene-STY7866_RS23955;Dbxref=Genbank:WP_000210901.1;Name=WP_000210901.1;gbkey=CDS;gene=cysJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457337.1;locus_tag=STY7866_RS23955;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_000210901.1;transl_table=11
NZ_CAAR01001347.1	RefSeq	gene	4739	5101	.	+	.	ID=gene-STY7866_RS23960;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=STY7866_RS23960
NZ_CAAR01001347.1	Protein Homology	CDS	4739	5101	.	+	0	ID=cds-WP_000108313.1;Parent=gene-STY7866_RS23960;Dbxref=Genbank:WP_000108313.1;Name=WP_000108313.1;gbkey=CDS;gene=queD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434567.1;locus_tag=STY7866_RS23960;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108313.1;transl_table=11
NZ_CAAR01001347.1	RefSeq	gene	5191	5988	.	-	.	ID=gene-STY7866_RS23965;Name=STY7866_RS23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23965
NZ_CAAR01001347.1	Protein Homology	CDS	5191	5988	.	-	0	ID=cds-WP_001208015.1;Parent=gene-STY7866_RS23965;Dbxref=Genbank:WP_001208015.1;Name=WP_001208015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457339.1;locus_tag=STY7866_RS23965;product=MBL fold metallo-hydrolase;protein_id=WP_001208015.1;transl_table=11
NZ_CAAR01001347.1	RefSeq	gene	5987	6250	.	+	.	ID=gene-STY7866_RS29615;Name=STY7866_RS29615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29615
NZ_CAAR01001347.1	Protein Homology	CDS	5987	6250	.	+	0	ID=cds-WP_024131207.1;Parent=gene-STY7866_RS29615;Dbxref=Genbank:WP_024131207.1;Name=WP_024131207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493366.1;locus_tag=STY7866_RS29615;product=hypothetical protein;protein_id=WP_024131207.1;transl_table=11
NZ_CAAR01001347.1	RefSeq	gene	6472	7143	.	-	.	ID=gene-STY7866_RS23970;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=STY7866_RS23970
NZ_CAAR01001347.1	Protein Homology	CDS	6472	7143	.	-	0	ID=cds-WP_001199961.1;Parent=gene-STY7866_RS23970;Dbxref=Genbank:WP_001199961.1;Name=WP_001199961.1;gbkey=CDS;gene=queE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=STY7866_RS23970;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199961.1;transl_table=11
NZ_CAAR01001347.1	RefSeq	gene	7279	8577	.	-	.	ID=gene-STY7866_RS23975;Name=STY7866_RS23975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23975
NZ_CAAR01001347.1	Protein Homology	CDS	7279	8577	.	-	0	ID=cds-WP_000036734.1;Parent=gene-STY7866_RS23975;Dbxref=Genbank:WP_000036734.1;Name=WP_000036734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=STY7866_RS23975;product=phosphopyruvate hydratase;protein_id=WP_000036734.1;transl_table=11
NZ_CAAR01001347.1	RefSeq	gene	8660	10297	.	-	.	ID=gene-STY7866_RS23980;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=STY7866_RS23980
NZ_CAAR01001347.1	Protein Homology	CDS	8660	10297	.	-	0	ID=cds-WP_000210863.1;Parent=gene-STY7866_RS23980;Dbxref=Genbank:WP_000210863.1;Name=WP_000210863.1;gbkey=CDS;gene=pyrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=STY7866_RS23980;product=CTP synthase (glutamine hydrolyzing);protein_id=WP_000210863.1;transl_table=11
NZ_CAAR01001347.1	RefSeq	gene	10525	11325	.	-	.	ID=gene-STY7866_RS23985;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=STY7866_RS23985
NZ_CAAR01001347.1	Protein Homology	CDS	10525	11325	.	-	0	ID=cds-WP_000210450.1;Parent=gene-STY7866_RS23985;Dbxref=Genbank:WP_000210450.1;Name=WP_000210450.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457343.1;locus_tag=STY7866_RS23985;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_000210450.1;transl_table=11
NZ_CAAR01001347.1	RefSeq	pseudogene	11934	12521	.	+	.	ID=gene-STY7866_RS23990;Name=STY7866_RS23990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23990;pseudo=true
NZ_CAAR01001347.1	Protein Homology	CDS	11934	12521	.	+	0	ID=cds-STY7866_RS23990;Parent=gene-STY7866_RS23990;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=STY7866_RS23990;product=fimbrial protein SteA;pseudo=true;transl_table=11
NZ_CAAR01001347.1	RefSeq	gene	12602	15301	.	+	.	ID=gene-STY7866_RS23995;Name=STY7866_RS23995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23995
NZ_CAAR01001347.1	Protein Homology	CDS	12602	15301	.	+	0	ID=cds-WP_000981793.1;Parent=gene-STY7866_RS23995;Dbxref=Genbank:WP_000981793.1;Name=WP_000981793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457344.1;locus_tag=STY7866_RS23995;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000981793.1;transl_table=11
NZ_CAAR01001347.1	RefSeq	gene	15314	16064	.	+	.	ID=gene-STY7866_RS24000;Name=STY7866_RS24000;end_range=16064,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS24000;partial=true
NZ_CAAR01001347.1	Protein Homology	CDS	15314	16064	.	+	0	ID=cds-WP_001044463.1;Parent=gene-STY7866_RS24000;Dbxref=Genbank:WP_001044463.1;Name=WP_001044463.1;end_range=16064,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457345.1;locus_tag=STY7866_RS24000;partial=true;product=fimbria/pilus periplasmic chaperone;protein_id=WP_001044463.1;transl_table=11
##sequence-region NZ_CAAR01001346.1 1 6482
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001346.1	RefSeq	region	1	6482	.	+	.	ID=NZ_CAAR01001346.1:1..6482;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001346.1	RefSeq	gene	1	1234	.	-	.	ID=gene-STY7866_RS23910;Name=STY7866_RS23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23910;partial=true;start_range=.,1
NZ_CAAR01001346.1	Protein Homology	CDS	1	1234	.	-	0	ID=cds-WP_151260020.1;Parent=gene-STY7866_RS23910;Dbxref=Genbank:WP_151260020.1;Name=WP_151260020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457785.1;locus_tag=STY7866_RS23910;partial=true;product=anaerobic sulfatase maturase;protein_id=WP_151260020.1;start_range=.,1;transl_table=11
NZ_CAAR01001346.1	RefSeq	gene	1570	3834	.	-	.	ID=gene-STY7866_RS23925;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=STY7866_RS23925
NZ_CAAR01001346.1	Protein Homology	CDS	1570	3834	.	-	0	ID=cds-WP_000154198.1;Parent=gene-STY7866_RS23925;Dbxref=Genbank:WP_000154198.1;Name=WP_000154198.1;gbkey=CDS;gene=metE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457786.1;locus_tag=STY7866_RS23925;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000154198.1;transl_table=11
NZ_CAAR01001346.1	RefSeq	gene	4083	5036	.	+	.	ID=gene-STY7866_RS23930;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=STY7866_RS23930
NZ_CAAR01001346.1	Protein Homology	CDS	4083	5036	.	+	0	ID=cds-WP_000569786.1;Parent=gene-STY7866_RS23930;Dbxref=Genbank:WP_000569786.1;Name=WP_000569786.1;gbkey=CDS;gene=metR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457787.1;locus_tag=STY7866_RS23930;product=HTH-type transcriptional regulator MetR;protein_id=WP_000569786.1;transl_table=11
NZ_CAAR01001346.1	RefSeq	gene	4924	5823	.	-	.	ID=gene-STY7866_RS26600;Name=STY7866_RS26600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26600
NZ_CAAR01001346.1	Protein Homology	CDS	4924	5823	.	-	0	ID=cds-WP_001196257.1;Parent=gene-STY7866_RS26600;Dbxref=Genbank:WP_001196257.1;Name=WP_001196257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457788.1;locus_tag=STY7866_RS26600;product=DMT family transporter;protein_id=WP_001196257.1;transl_table=11
NZ_CAAR01001346.1	RefSeq	gene	5904	6482	.	-	.	ID=gene-STY7866_RS23940;Name=STY7866_RS23940;end_range=6482,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23940;partial=true
NZ_CAAR01001346.1	Protein Homology	CDS	5904	6482	.	-	0	ID=cds-WP_000463684.1;Parent=gene-STY7866_RS23940;Dbxref=Genbank:WP_000463684.1;Name=WP_000463684.1;end_range=6482,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457789.1;locus_tag=STY7866_RS23940;partial=true;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000463684.1;transl_table=11
##sequence-region NZ_CAAR01001345.1 1 12818
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001345.1	RefSeq	region	1	12818	.	+	.	ID=NZ_CAAR01001345.1:1..12818;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001345.1	RefSeq	gene	125	829	.	+	.	ID=gene-STY7866_RS23850;Name=STY7866_RS23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23850
NZ_CAAR01001345.1	Protein Homology	CDS	125	829	.	+	0	ID=cds-WP_001131144.1;Parent=gene-STY7866_RS23850;Dbxref=Genbank:WP_001131144.1;Name=WP_001131144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458056.1;locus_tag=STY7866_RS23850;product=FadR family transcriptional regulator;protein_id=WP_001131144.1;transl_table=11
NZ_CAAR01001345.1	RefSeq	gene	841	1323	.	+	.	ID=gene-STY7866_RS23855;Name=STY7866_RS23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23855
NZ_CAAR01001345.1	Protein Homology	CDS	841	1323	.	+	0	ID=cds-WP_000202064.1;Parent=gene-STY7866_RS23855;Dbxref=Genbank:WP_000202064.1;Name=WP_000202064.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07690.14;locus_tag=STY7866_RS23855;product=MFS transporter;protein_id=WP_000202064.1;transl_table=11
NZ_CAAR01001345.1	RefSeq	gene	1360	2268	.	+	.	ID=gene-STY7866_RS23860;Name=STY7866_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23860
NZ_CAAR01001345.1	Protein Homology	CDS	1360	2268	.	+	0	ID=cds-WP_071527982.1;Parent=gene-STY7866_RS23860;Dbxref=Genbank:WP_071527982.1;Name=WP_071527982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001132527.1;locus_tag=STY7866_RS23860;product=MFS transporter;protein_id=WP_071527982.1;transl_table=11
NZ_CAAR01001345.1	RefSeq	gene	2234	3232	.	-	.	ID=gene-STY7866_RS23865;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=STY7866_RS23865
NZ_CAAR01001345.1	Protein Homology	CDS	2234	3232	.	-	0	ID=cds-WP_000224487.1;Parent=gene-STY7866_RS23865;Dbxref=Genbank:WP_000224487.1;Name=WP_000224487.1;gbkey=CDS;gene=rbsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458057.1;locus_tag=STY7866_RS23865;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224487.1;transl_table=11
NZ_CAAR01001345.1	RefSeq	gene	3236	4165	.	-	.	ID=gene-STY7866_RS23870;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=STY7866_RS23870
NZ_CAAR01001345.1	Protein Homology	CDS	3236	4165	.	-	0	ID=cds-WP_000844732.1;Parent=gene-STY7866_RS23870;Dbxref=Genbank:WP_000844732.1;Name=WP_000844732.1;gbkey=CDS;gene=rbsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458058.1;locus_tag=STY7866_RS23870;product=ribokinase;protein_id=WP_000844732.1;transl_table=11
NZ_CAAR01001345.1	RefSeq	gene	4298	5188	.	-	.	ID=gene-STY7866_RS23875;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=STY7866_RS23875
NZ_CAAR01001345.1	Protein Homology	CDS	4298	5188	.	-	0	ID=cds-WP_001056260.1;Parent=gene-STY7866_RS23875;Dbxref=Genbank:WP_001056260.1;Name=WP_001056260.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458059.1;locus_tag=STY7866_RS23875;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056260.1;transl_table=11
NZ_CAAR01001345.1	RefSeq	gene	5213	6178	.	-	.	ID=gene-STY7866_RS23880;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=STY7866_RS23880
NZ_CAAR01001345.1	Protein Homology	CDS	5213	6178	.	-	0	ID=cds-WP_000211345.1;Parent=gene-STY7866_RS23880;Dbxref=Genbank:WP_000211345.1;Name=WP_000211345.1;gbkey=CDS;gene=rbsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=STY7866_RS23880;product=ribose ABC transporter permease;protein_id=WP_000211345.1;transl_table=11
NZ_CAAR01001345.1	RefSeq	gene	6184	7689	.	-	.	ID=gene-STY7866_RS23885;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=STY7866_RS23885
NZ_CAAR01001345.1	Protein Homology	CDS	6184	7689	.	-	0	ID=cds-WP_000339360.1;Parent=gene-STY7866_RS23885;Dbxref=Genbank:WP_000339360.1;Name=WP_000339360.1;gbkey=CDS;gene=rbsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458061.1;locus_tag=STY7866_RS23885;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000339360.1;transl_table=11
NZ_CAAR01001345.1	RefSeq	gene	7697	8116	.	-	.	ID=gene-STY7866_RS23890;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=STY7866_RS23890
NZ_CAAR01001345.1	Protein Homology	CDS	7697	8116	.	-	0	ID=cds-WP_000715950.1;Parent=gene-STY7866_RS23890;Dbxref=Genbank:WP_000715950.1;Name=WP_000715950.1;gbkey=CDS;gene=rbsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458062.1;locus_tag=STY7866_RS23890;product=D-ribose pyranase;protein_id=WP_000715950.1;transl_table=11
NZ_CAAR01001345.1	RefSeq	gene	8333	10201	.	-	.	ID=gene-STY7866_RS23895;Name=STY7866_RS23895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23895
NZ_CAAR01001345.1	Protein Homology	CDS	8333	10201	.	-	0	ID=cds-WP_000102337.1;Parent=gene-STY7866_RS23895;Dbxref=Genbank:WP_000102337.1;Name=WP_000102337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=STY7866_RS23895;product=low affinity potassium transporter Kup;protein_id=WP_000102337.1;transl_table=11
NZ_CAAR01001345.1	RefSeq	gene	10549	12045	.	+	.	ID=gene-STY7866_RS23900;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=STY7866_RS23900
NZ_CAAR01001345.1	Protein Homology	CDS	10549	12045	.	+	0	ID=cds-WP_000940993.1;Parent=gene-STY7866_RS23900;Dbxref=Genbank:WP_000940993.1;Name=WP_000940993.1;gbkey=CDS;gene=ravA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458064.1;locus_tag=STY7866_RS23900;product=ATPase RavA;protein_id=WP_000940993.1;transl_table=11
NZ_CAAR01001345.1	RefSeq	pseudogene	12039	12818	.	+	.	ID=gene-STY7866_RS23905;Name=STY7866_RS23905;end_range=12818,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23905;partial=true;pseudo=true
NZ_CAAR01001345.1	Protein Homology	CDS	12039	12818	.	+	0	ID=cds-STY7866_RS23905;Parent=gene-STY7866_RS23905;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=12818,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458065.1;locus_tag=STY7866_RS23905;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001344.1 1 3121
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001344.1	RefSeq	region	1	3121	.	+	.	ID=NZ_CAAR01001344.1:1..3121;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001344.1	RefSeq	gene	22	567	.	-	.	ID=gene-STY7866_RS23830;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=STY7866_RS23830
NZ_CAAR01001344.1	Protein Homology	CDS	22	567	.	-	0	ID=cds-WP_000853982.1;Parent=gene-STY7866_RS23830;Dbxref=Genbank:WP_000853982.1;Name=WP_000853982.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457765.1;locus_tag=STY7866_RS23830;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853982.1;transl_table=11
NZ_CAAR01001344.1	RefSeq	gene	579	2030	.	-	.	ID=gene-STY7866_RS23835;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=STY7866_RS23835
NZ_CAAR01001344.1	Protein Homology	CDS	579	2030	.	-	0	ID=cds-WP_000545686.1;Parent=gene-STY7866_RS23835;Dbxref=Genbank:WP_000545686.1;Name=WP_000545686.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=STY7866_RS23835;product=Trk system potassium transporter TrkH;protein_id=WP_000545686.1;transl_table=11
NZ_CAAR01001344.1	RefSeq	gene	2069	2683	.	-	.	ID=gene-STY7866_RS23840;Name=STY7866_RS23840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23840
NZ_CAAR01001344.1	Protein Homology	CDS	2069	2683	.	-	0	ID=cds-WP_000378910.1;Parent=gene-STY7866_RS23840;Dbxref=Genbank:WP_000378910.1;Name=WP_000378910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457767.1;locus_tag=STY7866_RS23840;product=IMPACT family protein;protein_id=WP_000378910.1;transl_table=11
NZ_CAAR01001344.1	RefSeq	gene	2683	3121	.	-	.	ID=gene-STY7866_RS23845;Name=STY7866_RS23845;end_range=3121,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23845;partial=true
NZ_CAAR01001344.1	Protein Homology	CDS	2683	3121	.	-	1	ID=cds-WP_000552353.1;Parent=gene-STY7866_RS23845;Dbxref=Genbank:WP_000552353.1;Name=WP_000552353.1;end_range=3121,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=STY7866_RS23845;partial=true;product=M24 family metallopeptidase;protein_id=WP_000552353.1;transl_table=11
##sequence-region NZ_CAAR01001343.1 1 5873
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001343.1	RefSeq	region	1	5873	.	+	.	ID=NZ_CAAR01001343.1:1..5873;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001343.1	RefSeq	gene	1	1330	.	-	.	ID=gene-STY7866_RS23800;Name=STY7866_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23800;partial=true;start_range=.,1
NZ_CAAR01001343.1	Protein Homology	CDS	1	1330	.	-	0	ID=cds-WP_024151133.1;Parent=gene-STY7866_RS23800;Dbxref=Genbank:WP_024151133.1;Name=WP_024151133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=STY7866_RS23800;partial=true;product=class I tRNA ligase family protein;protein_id=WP_024151133.1;start_range=.,1;transl_table=11
NZ_CAAR01001343.1	RefSeq	gene	1375	2313	.	-	.	ID=gene-STY7866_RS23805;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=STY7866_RS23805
NZ_CAAR01001343.1	Protein Homology	CDS	1375	2313	.	-	0	ID=cds-WP_000767311.1;Parent=gene-STY7866_RS23805;Dbxref=Genbank:WP_000767311.1;Name=WP_000767311.1;gbkey=CDS;gene=ribF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454656.1;locus_tag=STY7866_RS23805;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767311.1;transl_table=11
NZ_CAAR01001343.1	RefSeq	gene	2321	2536	.	-	.	ID=gene-STY7866_RS23810;Name=STY7866_RS23810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23810
NZ_CAAR01001343.1	Protein Homology	CDS	2321	2536	.	-	0	ID=cds-WP_001575565.1;Parent=gene-STY7866_RS23810;Dbxref=Genbank:WP_001575565.1;Name=WP_001575565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454655.1;locus_tag=STY7866_RS23810;product=YaaY family protein;protein_id=WP_001575565.1;transl_table=11
NZ_CAAR01001343.1	RefSeq	gene	2642	2905	.	+	.	ID=gene-STY7866_RS23815;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=STY7866_RS23815
NZ_CAAR01001343.1	Protein Homology	CDS	2642	2905	.	+	0	ID=cds-WP_001518655.1;Parent=gene-STY7866_RS23815;Dbxref=Genbank:WP_001518655.1;Name=WP_001518655.1;gbkey=CDS;gene=rpsT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=STY7866_RS23815;product=30S ribosomal protein S20;protein_id=WP_001518655.1;transl_table=11
NZ_CAAR01001343.1	RefSeq	gene	2959	3204	.	+	.	ID=gene-STY7866_RS29610;Name=STY7866_RS29610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29610
NZ_CAAR01001343.1	GeneMarkS-2+	CDS	2959	3204	.	+	0	ID=cds-WP_001110886.1;Parent=gene-STY7866_RS29610;Dbxref=Genbank:WP_001110886.1;Name=WP_001110886.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=STY7866_RS29610;product=hypothetical protein;protein_id=WP_001110886.1;transl_table=11
NZ_CAAR01001343.1	RefSeq	gene	3362	4735	.	+	.	ID=gene-STY7866_RS23820;Name=STY7866_RS23820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23820
NZ_CAAR01001343.1	Protein Homology	CDS	3362	4735	.	+	0	ID=cds-WP_010989104.1;Parent=gene-STY7866_RS23820;Dbxref=Genbank:WP_010989104.1;Name=WP_010989104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454653.1;locus_tag=STY7866_RS23820;product=MFS transporter;protein_id=WP_010989104.1;transl_table=11
NZ_CAAR01001343.1	RefSeq	gene	4775	5873	.	+	.	ID=gene-STY7866_RS23825;Name=STY7866_RS23825;end_range=5873,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23825;partial=true
NZ_CAAR01001343.1	Protein Homology	CDS	4775	5873	.	+	0	ID=cds-WP_001116442.1;Parent=gene-STY7866_RS23825;Dbxref=Genbank:WP_001116442.1;Name=WP_001116442.1;end_range=5873,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454652.1;locus_tag=STY7866_RS23825;partial=true;product=family 31 glucosidase;protein_id=WP_001116442.1;transl_table=11
##sequence-region NZ_CAAR01001342.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001342.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01001342.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001341.1 1 136
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001341.1	RefSeq	region	1	136	.	+	.	ID=NZ_CAAR01001341.1:1..136;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001340.1 1 240
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001340.1	RefSeq	region	1	240	.	+	.	ID=NZ_CAAR01001340.1:1..240;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001340.1	RefSeq	pseudogene	70	240	.	-	.	ID=gene-STY7866_RS23795;Name=STY7866_RS23795;end_range=240,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23795;partial=true;pseudo=true
NZ_CAAR01001340.1	Protein Homology	CDS	70	240	.	-	0	ID=cds-STY7866_RS23795;Parent=gene-STY7866_RS23795;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=240,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=STY7866_RS23795;partial=true;product=50S ribosomal protein L5;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001339.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001339.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01001339.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001338.1 1 245
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001338.1	RefSeq	region	1	245	.	+	.	ID=NZ_CAAR01001338.1:1..245;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001338.1	RefSeq	pseudogene	1	194	.	-	.	ID=gene-STY7866_RS23790;Name=STY7866_RS23790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23790;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001338.1	Protein Homology	CDS	1	194	.	-	0	ID=cds-STY7866_RS23790;Parent=gene-STY7866_RS23790;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457346.1;locus_tag=STY7866_RS23790;partial=true;product=fimbrial protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001337.1 1 156
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001337.1	RefSeq	region	1	156	.	+	.	ID=NZ_CAAR01001337.1:1..156;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001336.1 1 1612
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001336.1	RefSeq	region	1	1612	.	+	.	ID=NZ_CAAR01001336.1:1..1612;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001336.1	RefSeq	gene	1	863	.	+	.	ID=gene-STY7866_RS23780;Name=STY7866_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23780;partial=true;start_range=.,1
NZ_CAAR01001336.1	Protein Homology	CDS	1	863	.	+	2	ID=cds-WP_000663223.1;Parent=gene-STY7866_RS23780;Dbxref=Genbank:WP_000663223.1;Name=WP_000663223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=STY7866_RS23780;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_000663223.1;start_range=.,1;transl_table=11
NZ_CAAR01001336.1	RefSeq	gene	878	1612	.	+	.	ID=gene-STY7866_RS23785;Name=STY7866_RS23785;end_range=1612,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23785;partial=true
NZ_CAAR01001336.1	Protein Homology	CDS	878	1612	.	+	0	ID=cds-WP_024151132.1;Parent=gene-STY7866_RS23785;Dbxref=Genbank:WP_024151132.1;Name=WP_024151132.1;end_range=1612,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455561.1;locus_tag=STY7866_RS23785;partial=true;product=PqiA/YebS family transporter subunit;protein_id=WP_024151132.1;transl_table=11
##sequence-region NZ_CAAR01001335.1 1 392
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001335.1	RefSeq	region	1	392	.	+	.	ID=NZ_CAAR01001335.1:1..392;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001335.1	RefSeq	gene	64	392	.	+	.	ID=gene-STY7866_RS23775;Name=STY7866_RS23775;end_range=392,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23775;partial=true
NZ_CAAR01001335.1	Protein Homology	CDS	64	392	.	+	0	ID=cds-WP_000010216.1;Parent=gene-STY7866_RS23775;Dbxref=Genbank:WP_000010216.1;Name=WP_000010216.1;end_range=392,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454966.1;locus_tag=STY7866_RS23775;partial=true;product=AMP-binding protein;protein_id=WP_000010216.1;transl_table=11
##sequence-region NZ_CAAR01001334.1 1 1025
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001334.1	RefSeq	region	1	1025	.	+	.	ID=NZ_CAAR01001334.1:1..1025;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001334.1	RefSeq	gene	1	1025	.	+	.	ID=gene-STY7866_RS23770;Name=ulaA;end_range=1025,.;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=STY7866_RS23770;partial=true;start_range=.,1
NZ_CAAR01001334.1	Protein Homology	CDS	1	1025	.	+	2	ID=cds-WP_000419175.1;Parent=gene-STY7866_RS23770;Dbxref=Genbank:WP_000419175.1;Name=WP_000419175.1;end_range=1025,.;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458817.3;locus_tag=STY7866_RS23770;partial=true;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000419175.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001333.1 1 1677
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001333.1	RefSeq	region	1	1677	.	+	.	ID=NZ_CAAR01001333.1:1..1677;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001333.1	RefSeq	gene	28	633	.	+	.	ID=gene-STY7866_RS23760;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=STY7866_RS23760
NZ_CAAR01001333.1	Protein Homology	CDS	28	633	.	+	0	ID=cds-WP_001195023.1;Parent=gene-STY7866_RS23760;Dbxref=Genbank:WP_001195023.1;Name=WP_001195023.1;gbkey=CDS;gene=recR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455082.1;locus_tag=STY7866_RS23760;product=recombination protein RecR;protein_id=WP_001195023.1;transl_table=11
NZ_CAAR01001333.1	RefSeq	gene	744	1677	.	+	.	ID=gene-STY7866_RS23765;Name=htpG;end_range=1677,.;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=STY7866_RS23765;partial=true
NZ_CAAR01001333.1	Protein Homology	CDS	744	1677	.	+	0	ID=cds-WP_000678176.1;Parent=gene-STY7866_RS23765;Dbxref=Genbank:WP_000678176.1;Name=WP_000678176.1;end_range=1677,.;gbkey=CDS;gene=htpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=STY7866_RS23765;partial=true;product=molecular chaperone HtpG;protein_id=WP_000678176.1;transl_table=11
##sequence-region NZ_CAAR01001332.1 1 1372
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001332.1	RefSeq	region	1	1372	.	+	.	ID=NZ_CAAR01001332.1:1..1372;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001332.1	RefSeq	pseudogene	1	144	.	+	.	ID=gene-STY7866_RS29595;Name=STY7866_RS29595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29595;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001332.1	Protein Homology	CDS	1	144	.	+	0	ID=cds-STY7866_RS29595;Parent=gene-STY7866_RS29595;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458342.1;locus_tag=STY7866_RS29595;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001332.1	RefSeq	gene	210	440	.	+	.	ID=gene-STY7866_RS23750;Name=STY7866_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23750
NZ_CAAR01001332.1	Protein Homology	CDS	210	440	.	+	0	ID=cds-WP_001681725.1;Parent=gene-STY7866_RS23750;Dbxref=Genbank:WP_001681725.1;Name=WP_001681725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000423444.1;locus_tag=STY7866_RS23750;product=hypothetical protein;protein_id=WP_001681725.1;transl_table=11
NZ_CAAR01001332.1	RefSeq	pseudogene	484	1372	.	+	.	ID=gene-STY7866_RS23755;Name=STY7866_RS23755;end_range=1372,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23755;partial=true;pseudo=true
NZ_CAAR01001332.1	Protein Homology	CDS	484	1372	.	+	0	ID=cds-STY7866_RS23755;Parent=gene-STY7866_RS23755;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1372,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454709.1;locus_tag=STY7866_RS23755;partial=true;product=DNA polymerase II;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001331.1 1 1701
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001331.1	RefSeq	region	1	1701	.	+	.	ID=NZ_CAAR01001331.1:1..1701;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001331.1	RefSeq	pseudogene	59	807	.	+	.	ID=gene-STY7866_RS23740;Name=STY7866_RS23740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23740;pseudo=true
NZ_CAAR01001331.1	Protein Homology	CDS	59	807	.	+	0	ID=cds-STY7866_RS23740;Parent=gene-STY7866_RS23740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574776.1;locus_tag=STY7866_RS23740;product=dimethyl sulfoxide reductase;pseudo=true;transl_table=11
NZ_CAAR01001331.1	RefSeq	gene	807	1670	.	+	.	ID=gene-STY7866_RS23745;Name=STY7866_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23745
NZ_CAAR01001331.1	Protein Homology	CDS	807	1670	.	+	0	ID=cds-WP_000247794.1;Parent=gene-STY7866_RS23745;Dbxref=Genbank:WP_000247794.1;Name=WP_000247794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457059.1;locus_tag=STY7866_RS23745;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_000247794.1;transl_table=11
##sequence-region NZ_CAAR01001330.1 1 3349
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001330.1	RefSeq	region	1	3349	.	+	.	ID=NZ_CAAR01001330.1:1..3349;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001330.1	RefSeq	pseudogene	65	806	.	-	.	ID=gene-STY7866_RS23720;Name=papD;gbkey=Gene;gene=papD;gene_biotype=pseudogene;locus_tag=STY7866_RS23720;pseudo=true
NZ_CAAR01001330.1	Protein Homology	CDS	65	806	.	-	0	ID=cds-STY7866_RS23720;Parent=gene-STY7866_RS23720;Note=frameshifted;gbkey=CDS;gene=papD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454906.1;locus_tag=STY7866_RS23720;product=pili assembly chaperone PapD;pseudo=true;transl_table=11
NZ_CAAR01001330.1	RefSeq	pseudogene	881	1378	.	-	.	ID=gene-STY7866_RS29585;Name=STY7866_RS29585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29585;pseudo=true
NZ_CAAR01001330.1	Protein Homology	CDS	881	1378	.	-	0	ID=cds-STY7866_RS29585;Parent=gene-STY7866_RS29585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789648.1;locus_tag=STY7866_RS29585;product=Saf-pilin pilus formation protein SafA;pseudo=true;transl_table=11
NZ_CAAR01001330.1	RefSeq	gene	1511	2005	.	-	.	ID=gene-STY7866_RS23730;Name=STY7866_RS23730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23730
NZ_CAAR01001330.1	Protein Homology	CDS	1511	2005	.	-	0	ID=cds-WP_000789625.1;Parent=gene-STY7866_RS23730;Dbxref=Genbank:WP_000789625.1;Name=WP_000789625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454905.1;locus_tag=STY7866_RS23730;product=lipoprotein;protein_id=WP_000789625.1;transl_table=11
NZ_CAAR01001330.1	RefSeq	pseudogene	2761	3334	.	-	.	ID=gene-STY7866_RS29590;Name=STY7866_RS29590;end_range=3334,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29590;partial=true;pseudo=true
NZ_CAAR01001330.1	Protein Homology	CDS	2761	3334	.	-	0	ID=cds-STY7866_RS29590;Parent=gene-STY7866_RS29590;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3334,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=STY7866_RS29590;partial=true;product=transposase family protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001329.1 1 4097
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001329.1	RefSeq	region	1	4097	.	+	.	ID=NZ_CAAR01001329.1:1..4097;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001329.1	RefSeq	gene	1	528	.	+	.	ID=gene-STY7866_RS23695;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=STY7866_RS23695;partial=true;start_range=.,1
NZ_CAAR01001329.1	Protein Homology	CDS	1	528	.	+	0	ID=cds-WP_000408688.1;Parent=gene-STY7866_RS23695;Dbxref=Genbank:WP_000408688.1;Name=WP_000408688.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=STY7866_RS23695;partial=true;product=ribose-phosphate diphosphokinase;protein_id=WP_000408688.1;start_range=.,1;transl_table=11
NZ_CAAR01001329.1	RefSeq	gene	653	2338	.	+	.	ID=gene-STY7866_RS23700;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=STY7866_RS23700
NZ_CAAR01001329.1	Protein Homology	CDS	653	2338	.	+	0	ID=cds-WP_001037188.1;Parent=gene-STY7866_RS23700;Dbxref=Genbank:WP_001037188.1;Name=WP_001037188.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456291.1;locus_tag=STY7866_RS23700;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001037188.1;transl_table=11
NZ_CAAR01001329.1	RefSeq	gene	2440	2661	.	-	.	ID=gene-STY7866_RS23705;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=STY7866_RS23705
NZ_CAAR01001329.1	Protein Homology	CDS	2440	2661	.	-	0	ID=cds-WP_000823877.1;Parent=gene-STY7866_RS23705;Dbxref=Genbank:WP_000823877.1;Name=WP_000823877.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=STY7866_RS23705;product=stress-induced protein YchH;protein_id=WP_000823877.1;transl_table=11
NZ_CAAR01001329.1	RefSeq	gene	2912	3520	.	+	.	ID=gene-STY7866_RS23710;Name=STY7866_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23710
NZ_CAAR01001329.1	Protein Homology	CDS	2912	3520	.	+	0	ID=cds-WP_000365078.1;Parent=gene-STY7866_RS23710;Dbxref=Genbank:WP_000365078.1;Name=WP_000365078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456293.1;locus_tag=STY7866_RS23710;product=aminoacyl-tRNA hydrolase;protein_id=WP_000365078.1;transl_table=11
NZ_CAAR01001329.1	RefSeq	gene	3637	4097	.	+	.	ID=gene-STY7866_RS23715;Name=ychF;end_range=4097,.;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=STY7866_RS23715;partial=true
NZ_CAAR01001329.1	Protein Homology	CDS	3637	4097	.	+	0	ID=cds-WP_000505848.1;Parent=gene-STY7866_RS23715;Dbxref=Genbank:WP_000505848.1;Name=WP_000505848.1;end_range=4097,.;gbkey=CDS;gene=ychF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=STY7866_RS23715;partial=true;product=redox-regulated ATPase YchF;protein_id=WP_000505848.1;transl_table=11
##sequence-region NZ_CAAR01001328.1 1 11104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001328.1	RefSeq	region	1	11104	.	+	.	ID=NZ_CAAR01001328.1:1..11104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001328.1	RefSeq	gene	78	752	.	-	.	ID=gene-STY7866_RS23640;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=STY7866_RS23640
NZ_CAAR01001328.1	Protein Homology	CDS	78	752	.	-	0	ID=cds-WP_001237936.1;Parent=gene-STY7866_RS23640;Dbxref=Genbank:WP_001237936.1;Name=WP_001237936.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457183.1;locus_tag=STY7866_RS23640;product=transcriptional regulator TctD;protein_id=WP_001237936.1;transl_table=11
NZ_CAAR01001328.1	RefSeq	gene	907	1884	.	+	.	ID=gene-STY7866_RS23650;Name=STY7866_RS23650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23650
NZ_CAAR01001328.1	Protein Homology	CDS	907	1884	.	+	0	ID=cds-WP_000744412.1;Parent=gene-STY7866_RS23650;Dbxref=Genbank:WP_000744412.1;Name=WP_000744412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=STY7866_RS23650;product=tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_000744412.1;transl_table=11
NZ_CAAR01001328.1	RefSeq	gene	1896	2330	.	+	.	ID=gene-STY7866_RS23655;Name=STY7866_RS23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23655
NZ_CAAR01001328.1	Protein Homology	CDS	1896	2330	.	+	0	ID=cds-WP_001574835.1;Parent=gene-STY7866_RS23655;Dbxref=Genbank:WP_001574835.1;Name=WP_001574835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=STY7866_RS23655;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_001574835.1;transl_table=11
NZ_CAAR01001328.1	RefSeq	gene	2341	3855	.	+	.	ID=gene-STY7866_RS23660;Name=STY7866_RS23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23660
NZ_CAAR01001328.1	Protein Homology	CDS	2341	3855	.	+	0	ID=cds-WP_000382024.1;Parent=gene-STY7866_RS23660;Dbxref=Genbank:WP_000382024.1;Name=WP_000382024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457187.1;locus_tag=STY7866_RS23660;product=tripartite tricarboxylate transporter permease;protein_id=WP_000382024.1;transl_table=11
NZ_CAAR01001328.1	RefSeq	gene	4149	5135	.	+	.	ID=gene-STY7866_RS23665;Name=csiD;gbkey=Gene;gene=csiD;gene_biotype=protein_coding;locus_tag=STY7866_RS23665
NZ_CAAR01001328.1	Protein Homology	CDS	4149	5135	.	+	0	ID=cds-WP_001782268.1;Parent=gene-STY7866_RS23665;Dbxref=Genbank:WP_001782268.1;Name=WP_001782268.1;gbkey=CDS;gene=csiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457188.3;locus_tag=STY7866_RS23665;product=carbon starvation induced protein CsiD;protein_id=WP_001782268.1;transl_table=11
NZ_CAAR01001328.1	RefSeq	gene	5161	6429	.	+	.	ID=gene-STY7866_RS23670;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=STY7866_RS23670
NZ_CAAR01001328.1	Protein Homology	CDS	5161	6429	.	+	0	ID=cds-WP_000271916.1;Parent=gene-STY7866_RS23670;Dbxref=Genbank:WP_000271916.1;Name=WP_000271916.1;gbkey=CDS;gene=lhgO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457189.1;locus_tag=STY7866_RS23670;product=L-2-hydroxyglutarate oxidase;protein_id=WP_000271916.1;transl_table=11
NZ_CAAR01001328.1	RefSeq	gene	6451	7899	.	+	.	ID=gene-STY7866_RS23675;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=STY7866_RS23675
NZ_CAAR01001328.1	Protein Homology	CDS	6451	7899	.	+	0	ID=cds-WP_001176534.1;Parent=gene-STY7866_RS23675;Dbxref=Genbank:WP_001176534.1;Name=WP_001176534.1;gbkey=CDS;gene=gabD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457190.1;locus_tag=STY7866_RS23675;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_001176534.1;transl_table=11
NZ_CAAR01001328.1	RefSeq	gene	7914	9197	.	+	.	ID=gene-STY7866_RS23680;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=STY7866_RS23680
NZ_CAAR01001328.1	Protein Homology	CDS	7914	9197	.	+	0	ID=cds-WP_001095643.1;Parent=gene-STY7866_RS23680;Dbxref=Genbank:WP_001095643.1;Name=WP_001095643.1;gbkey=CDS;gene=gabT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457191.1;locus_tag=STY7866_RS23680;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_001095643.1;transl_table=11
NZ_CAAR01001328.1	RefSeq	gene	9327	10727	.	+	.	ID=gene-STY7866_RS23685;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=STY7866_RS23685
NZ_CAAR01001328.1	Protein Homology	CDS	9327	10727	.	+	0	ID=cds-WP_000531291.1;Parent=gene-STY7866_RS23685;Dbxref=Genbank:WP_000531291.1;Name=WP_000531291.1;gbkey=CDS;gene=gabP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457192.1;locus_tag=STY7866_RS23685;product=GABA permease;protein_id=WP_000531291.1;transl_table=11
NZ_CAAR01001328.1	RefSeq	gene	10769	11104	.	+	.	ID=gene-STY7866_RS23690;Name=csiR;end_range=11104,.;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=STY7866_RS23690;partial=true
NZ_CAAR01001328.1	Protein Homology	CDS	10769	11104	.	+	0	ID=cds-WP_000126149.1;Parent=gene-STY7866_RS23690;Dbxref=Genbank:WP_000126149.1;Name=WP_000126149.1;end_range=11104,.;gbkey=CDS;gene=csiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457193.1;locus_tag=STY7866_RS23690;partial=true;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000126149.1;transl_table=11
##sequence-region NZ_CAAR01001327.1 1 1414
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001327.1	RefSeq	region	1	1414	.	+	.	ID=NZ_CAAR01001327.1:1..1414;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001327.1	RefSeq	gene	7	537	.	-	.	ID=gene-STY7866_RS23625;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=STY7866_RS23625
NZ_CAAR01001327.1	Protein Homology	CDS	7	537	.	-	0	ID=cds-WP_026001581.1;Parent=gene-STY7866_RS23625;Dbxref=Genbank:WP_026001581.1;Name=WP_026001581.1;gbkey=CDS;gene=mlaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000959267.1;locus_tag=STY7866_RS23625;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_026001581.1;transl_table=11
NZ_CAAR01001327.1	RefSeq	gene	562	1344	.	-	.	ID=gene-STY7866_RS23630;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=STY7866_RS23630
NZ_CAAR01001327.1	Protein Homology	CDS	562	1344	.	-	0	ID=cds-WP_000925786.1;Parent=gene-STY7866_RS23630;Dbxref=Genbank:WP_000925786.1;Name=WP_000925786.1;gbkey=CDS;gene=mlaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=STY7866_RS23630;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925786.1;transl_table=11
NZ_CAAR01001327.1	RefSeq	pseudogene	1352	1414	.	-	.	ID=gene-STY7866_RS29580;Name=STY7866_RS29580;end_range=1414,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29580;partial=true;pseudo=true
NZ_CAAR01001327.1	Protein Homology	CDS	1352	1414	.	-	0	ID=cds-STY7866_RS29580;Parent=gene-STY7866_RS29580;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1414,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457692.1;locus_tag=STY7866_RS29580;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001326.1 1 3649
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001326.1	RefSeq	region	1	3649	.	+	.	ID=NZ_CAAR01001326.1:1..3649;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001326.1	RefSeq	pseudogene	243	770	.	+	.	ID=gene-STY7866_RS23600;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=pseudogene;locus_tag=STY7866_RS23600;pseudo=true
NZ_CAAR01001326.1	Protein Homology	CDS	243	770	.	+	0	ID=cds-STY7866_RS23600;Parent=gene-STY7866_RS23600;Note=frameshifted;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=STY7866_RS23600;product=23S rRNA accumulation protein YceD;pseudo=true;transl_table=11
NZ_CAAR01001326.1	RefSeq	gene	822	995	.	+	.	ID=gene-STY7866_RS23605;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=STY7866_RS23605
NZ_CAAR01001326.1	Protein Homology	CDS	822	995	.	+	0	ID=cds-WP_000290727.1;Parent=gene-STY7866_RS23605;Dbxref=Genbank:WP_000290727.1;Name=WP_000290727.1;gbkey=CDS;gene=rpmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=STY7866_RS23605;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11
NZ_CAAR01001326.1	RefSeq	gene	1129	2208	.	+	.	ID=gene-STY7866_RS23610;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=STY7866_RS23610
NZ_CAAR01001326.1	Protein Homology	CDS	1129	2208	.	+	0	ID=cds-WP_001518286.1;Parent=gene-STY7866_RS23610;Dbxref=Genbank:WP_001518286.1;Name=WP_001518286.1;gbkey=CDS;gene=plsX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455685.1;locus_tag=STY7866_RS23610;product=phosphate acyltransferase PlsX;protein_id=WP_001518286.1;transl_table=11
NZ_CAAR01001326.1	RefSeq	gene	2288	3241	.	+	.	ID=gene-STY7866_RS23615;Name=STY7866_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23615
NZ_CAAR01001326.1	Protein Homology	CDS	2288	3241	.	+	0	ID=cds-WP_000288151.1;Parent=gene-STY7866_RS23615;Dbxref=Genbank:WP_000288151.1;Name=WP_000288151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=STY7866_RS23615;product=ketoacyl-ACP synthase III;protein_id=WP_000288151.1;transl_table=11
NZ_CAAR01001326.1	RefSeq	pseudogene	3257	3649	.	+	.	ID=gene-STY7866_RS23620;Name=STY7866_RS23620;end_range=3649,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23620;partial=true;pseudo=true
NZ_CAAR01001326.1	Protein Homology	CDS	3257	3649	.	+	0	ID=cds-STY7866_RS23620;Parent=gene-STY7866_RS23620;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3649,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455687.1;locus_tag=STY7866_RS23620;partial=true;product=ACP S-malonyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001325.1 1 9523
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001325.1	RefSeq	region	1	9523	.	+	.	ID=NZ_CAAR01001325.1:1..9523;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001325.1	RefSeq	pseudogene	1	765	.	+	.	ID=gene-STY7866_RS23555;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=pseudogene;locus_tag=STY7866_RS23555;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001325.1	Protein Homology	CDS	1	765	.	+	2	ID=cds-STY7866_RS23555;Parent=gene-STY7866_RS23555;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456937.1;locus_tag=STY7866_RS23555;partial=true;product=omptin family outer membrane protease PgtE;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001325.1	RefSeq	gene	951	1097	.	+	.	ID=gene-STY7866_RS29565;Name=STY7866_RS29565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29565
NZ_CAAR01001325.1	Protein Homology	CDS	951	1097	.	+	0	ID=cds-WP_106417237.1;Parent=gene-STY7866_RS29565;Dbxref=Genbank:WP_106417237.1;Name=WP_106417237.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09251.8;locus_tag=STY7866_RS29565;product=hypothetical protein;protein_id=WP_106417237.1;transl_table=11
NZ_CAAR01001325.1	RefSeq	gene	1113	1256	.	+	.	ID=gene-STY7866_RS29570;Name=STY7866_RS29570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29570
NZ_CAAR01001325.1	Protein Homology	CDS	1113	1256	.	+	0	ID=cds-WP_106417236.1;Parent=gene-STY7866_RS29570;Dbxref=Genbank:WP_106417236.1;Name=WP_106417236.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09251.8;locus_tag=STY7866_RS29570;product=hypothetical protein;protein_id=WP_106417236.1;transl_table=11
NZ_CAAR01001325.1	RefSeq	pseudogene	1629	2075	.	+	.	ID=gene-STY7866_RS23560;Name=STY7866_RS23560;end_range=2075,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23560;partial=true;pseudo=true
NZ_CAAR01001325.1	Protein Homology	CDS	1629	2075	.	+	0	ID=cds-STY7866_RS23560;Parent=gene-STY7866_RS23560;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2075,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558245.1;locus_tag=STY7866_RS23560;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_CAAR01001325.1	RefSeq	gene	2246	4168	.	-	.	ID=gene-STY7866_RS23565;Name=STY7866_RS23565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23565
NZ_CAAR01001325.1	Protein Homology	CDS	2246	4168	.	-	0	ID=cds-WP_000400610.1;Parent=gene-STY7866_RS23565;Dbxref=Genbank:WP_000400610.1;Name=WP_000400610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456936.1;locus_tag=STY7866_RS23565;product=acyltransferase;protein_id=WP_000400610.1;transl_table=11
NZ_CAAR01001325.1	RefSeq	gene	4185	4439	.	-	.	ID=gene-STY7866_RS23570;Name=STY7866_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23570
NZ_CAAR01001325.1	Protein Homology	CDS	4185	4439	.	-	0	ID=cds-WP_000703599.1;Parent=gene-STY7866_RS23570;Dbxref=Genbank:WP_000703599.1;Name=WP_000703599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703599.1;locus_tag=STY7866_RS23570;product=glycosyltransferase;protein_id=WP_000703599.1;transl_table=11
NZ_CAAR01001325.1	RefSeq	gene	4408	4797	.	-	.	ID=gene-STY7866_RS23575;Name=STY7866_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23575
NZ_CAAR01001325.1	Protein Homology	CDS	4408	4797	.	-	0	ID=cds-WP_001682026.1;Parent=gene-STY7866_RS23575;Dbxref=Genbank:WP_001682026.1;Name=WP_001682026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456935.1;locus_tag=STY7866_RS23575;product=GtrA family protein;protein_id=WP_001682026.1;transl_table=11
NZ_CAAR01001325.1	RefSeq	pseudogene	5118	5742	.	+	.	ID=gene-STY7866_RS29575;Name=STY7866_RS29575;end_range=5742,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29575;partial=true;pseudo=true
NZ_CAAR01001325.1	Protein Homology	CDS	5118	5742	.	+	0	ID=cds-STY7866_RS29575;Parent=gene-STY7866_RS29575;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5742,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001004113.1;locus_tag=STY7866_RS29575;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11
NZ_CAAR01001325.1	RefSeq	gene	5890	5964	.	-	.	ID=gene-STY7866_RS23580;Name=STY7866_RS23580;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS23580
NZ_CAAR01001325.1	tRNAscan-SE	tRNA	5890	5964	.	-	.	ID=rna-STY7866_RS23580;Parent=gene-STY7866_RS23580;anticodon=(pos:complement(5929..5931));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS23580;product=tRNA-Arg
NZ_CAAR01001325.1	tRNAscan-SE	exon	5890	5964	.	-	.	ID=exon-STY7866_RS23580-1;Parent=rna-STY7866_RS23580;anticodon=(pos:complement(5929..5931));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS23580;product=tRNA-Arg
NZ_CAAR01001325.1	RefSeq	gene	6040	6981	.	-	.	ID=gene-STY7866_RS23585;Name=STY7866_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23585
NZ_CAAR01001325.1	Protein Homology	CDS	6040	6981	.	-	0	ID=cds-WP_000377769.1;Parent=gene-STY7866_RS23585;Dbxref=Genbank:WP_000377769.1;Name=WP_000377769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456934.1;locus_tag=STY7866_RS23585;product=membrane protein;protein_id=WP_000377769.1;transl_table=11
NZ_CAAR01001325.1	RefSeq	gene	7271	8026	.	+	.	ID=gene-STY7866_RS23590;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=STY7866_RS23590
NZ_CAAR01001325.1	Protein Homology	CDS	7271	8026	.	+	0	ID=cds-WP_000776787.1;Parent=gene-STY7866_RS23590;Dbxref=Genbank:WP_000776787.1;Name=WP_000776787.1;gbkey=CDS;gene=mlaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456933.1;locus_tag=STY7866_RS23590;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776787.1;transl_table=11
NZ_CAAR01001325.1	RefSeq	gene	8087	9400	.	-	.	ID=gene-STY7866_RS23595;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=STY7866_RS23595
NZ_CAAR01001325.1	Protein Homology	CDS	8087	9400	.	-	0	ID=cds-WP_000245430.1;Parent=gene-STY7866_RS23595;Dbxref=Genbank:WP_000245430.1;Name=WP_000245430.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456932.1;locus_tag=STY7866_RS23595;product=long-chain fatty acid transporter FadL;protein_id=WP_000245430.1;transl_table=11
##sequence-region NZ_CAAR01001324.1 1 278
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001324.1	RefSeq	region	1	278	.	+	.	ID=NZ_CAAR01001324.1:1..278;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001324.1	RefSeq	pseudogene	149	278	.	+	.	ID=gene-STY7866_RS29560;Name=STY7866_RS29560;end_range=278,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29560;partial=true;pseudo=true
NZ_CAAR01001324.1	Protein Homology	CDS	149	278	.	+	0	ID=cds-STY7866_RS29560;Parent=gene-STY7866_RS29560;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=278,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000975154.1;locus_tag=STY7866_RS29560;partial=true;product=SH3 domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001323.1 1 5203
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001323.1	RefSeq	region	1	5203	.	+	.	ID=NZ_CAAR01001323.1:1..5203;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001323.1	RefSeq	gene	1	724	.	-	.	ID=gene-STY7866_RS23510;Name=STY7866_RS23510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23510;partial=true;start_range=.,1
NZ_CAAR01001323.1	Protein Homology	CDS	1	724	.	-	0	ID=cds-WP_000948791.1;Parent=gene-STY7866_RS23510;Dbxref=Genbank:WP_000948791.1;Name=WP_000948791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456546.1;locus_tag=STY7866_RS23510;partial=true;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000948791.1;start_range=.,1;transl_table=11
NZ_CAAR01001323.1	RefSeq	gene	1034	1261	.	-	.	ID=gene-STY7866_RS23515;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=STY7866_RS23515
NZ_CAAR01001323.1	Protein Homology	CDS	1034	1261	.	-	0	ID=cds-WP_000844798.1;Parent=gene-STY7866_RS23515;Dbxref=Genbank:WP_000844798.1;Name=WP_000844798.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456545.1;locus_tag=STY7866_RS23515;product=YodD family peroxide/acid resistance protein;protein_id=WP_000844798.1;transl_table=11
NZ_CAAR01001323.1	RefSeq	pseudogene	1336	1569	.	+	.	ID=gene-STY7866_RS23520;Name=dsrB;end_range=1569,.;gbkey=Gene;gene=dsrB;gene_biotype=pseudogene;locus_tag=STY7866_RS23520;partial=true;pseudo=true
NZ_CAAR01001323.1	Protein Homology	CDS	1336	1569	.	+	0	ID=cds-STY7866_RS23520;Parent=gene-STY7866_RS23520;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1569,.;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456544.1;locus_tag=STY7866_RS23520;partial=true;product=protein DsrB;pseudo=true;transl_table=11
NZ_CAAR01001323.1	RefSeq	gene	1624	2247	.	-	.	ID=gene-STY7866_RS23525;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=STY7866_RS23525
NZ_CAAR01001323.1	Protein Homology	CDS	1624	2247	.	-	0	ID=cds-WP_000103972.1;Parent=gene-STY7866_RS23525;Dbxref=Genbank:WP_000103972.1;Name=WP_000103972.1;gbkey=CDS;gene=rcsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456543.1;locus_tag=STY7866_RS23525;product=transcriptional regulator RcsA;protein_id=WP_000103972.1;transl_table=11
NZ_CAAR01001323.1	RefSeq	gene	2529	3323	.	-	.	ID=gene-STY7866_RS23530;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=STY7866_RS23530
NZ_CAAR01001323.1	Protein Homology	CDS	2529	3323	.	-	0	ID=cds-WP_000616875.1;Parent=gene-STY7866_RS23530;Dbxref=Genbank:WP_000616875.1;Name=WP_000616875.1;gbkey=CDS;gene=fliR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456542.1;locus_tag=STY7866_RS23530;product=flagellar type III secretion system protein FliR;protein_id=WP_000616875.1;transl_table=11
NZ_CAAR01001323.1	RefSeq	gene	3332	3601	.	-	.	ID=gene-STY7866_RS23535;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=STY7866_RS23535
NZ_CAAR01001323.1	Protein Homology	CDS	3332	3601	.	-	0	ID=cds-WP_000187355.1;Parent=gene-STY7866_RS23535;Dbxref=Genbank:WP_000187355.1;Name=WP_000187355.1;gbkey=CDS;gene=fliQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=STY7866_RS23535;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187355.1;transl_table=11
NZ_CAAR01001323.1	RefSeq	gene	3611	4348	.	-	.	ID=gene-STY7866_RS23540;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=STY7866_RS23540
NZ_CAAR01001323.1	Protein Homology	CDS	3611	4348	.	-	0	ID=cds-WP_001253411.1;Parent=gene-STY7866_RS23540;Dbxref=Genbank:WP_001253411.1;Name=WP_001253411.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;gbkey=CDS;gene=fliP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456540.1;locus_tag=STY7866_RS23540;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253411.1;transl_table=11
NZ_CAAR01001323.1	RefSeq	gene	4348	4725	.	-	.	ID=gene-STY7866_RS23545;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=STY7866_RS23545
NZ_CAAR01001323.1	Protein Homology	CDS	4348	4725	.	-	0	ID=cds-WP_000978276.1;Parent=gene-STY7866_RS23545;Dbxref=Genbank:WP_000978276.1;Name=WP_000978276.1;gbkey=CDS;gene=fliO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456539.1;locus_tag=STY7866_RS23545;product=flagellar type III secretion system protein FliO;protein_id=WP_000978276.1;transl_table=11
NZ_CAAR01001323.1	RefSeq	gene	4725	5138	.	-	.	ID=gene-STY7866_RS23550;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=STY7866_RS23550
NZ_CAAR01001323.1	Protein Homology	CDS	4725	5138	.	-	0	ID=cds-WP_001282109.1;Parent=gene-STY7866_RS23550;Dbxref=Genbank:WP_001282109.1;Name=WP_001282109.1;gbkey=CDS;gene=fliN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906238.1;locus_tag=STY7866_RS23550;product=flagellar motor switch protein FliN;protein_id=WP_001282109.1;transl_table=11
NZ_CAAR01001323.1	RefSeq	pseudogene	5135	5203	.	-	.	ID=gene-STY7866_RS29555;Name=STY7866_RS29555;end_range=5203,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29555;partial=true;pseudo=true
NZ_CAAR01001323.1	Protein Homology	CDS	5135	5203	.	-	0	ID=cds-STY7866_RS29555;Parent=gene-STY7866_RS29555;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5203,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=STY7866_RS29555;partial=true;product=flagellar motor switch FliM family protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001322.1 1 3594
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001322.1	RefSeq	region	1	3594	.	+	.	ID=NZ_CAAR01001322.1:1..3594;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001322.1	RefSeq	gene	250	552	.	+	.	ID=gene-STY7866_RS23475;Name=STY7866_RS23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23475
NZ_CAAR01001322.1	Protein Homology	CDS	250	552	.	+	0	ID=cds-WP_001020123.1;Parent=gene-STY7866_RS23475;Dbxref=Genbank:WP_001020123.1;Name=WP_001020123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001020124.1;locus_tag=STY7866_RS23475;product=hypothetical protein;protein_id=WP_001020123.1;transl_table=11
NZ_CAAR01001322.1	RefSeq	gene	648	1028	.	+	.	ID=gene-STY7866_RS23480;Name=STY7866_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23480
NZ_CAAR01001322.1	Protein Homology	CDS	648	1028	.	+	0	ID=cds-WP_001103837.1;Parent=gene-STY7866_RS23480;Dbxref=Genbank:WP_001103837.1;Name=WP_001103837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103837.1;locus_tag=STY7866_RS23480;product=hypothetical protein;protein_id=WP_001103837.1;transl_table=11
NZ_CAAR01001322.1	RefSeq	gene	1399	1608	.	+	.	ID=gene-STY7866_RS23485;Name=STY7866_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23485
NZ_CAAR01001322.1	Protein Homology	CDS	1399	1608	.	+	0	ID=cds-WP_000018145.1;Parent=gene-STY7866_RS23485;Dbxref=Genbank:WP_000018145.1;Name=WP_000018145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018146.1;locus_tag=STY7866_RS23485;product=hypothetical protein;protein_id=WP_000018145.1;transl_table=11
NZ_CAAR01001322.1	RefSeq	gene	1626	2078	.	+	.	ID=gene-STY7866_RS23490;Name=STY7866_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23490
NZ_CAAR01001322.1	Protein Homology	CDS	1626	2078	.	+	0	ID=cds-WP_000979718.1;Parent=gene-STY7866_RS23490;Dbxref=Genbank:WP_000979718.1;Name=WP_000979718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979718.1;locus_tag=STY7866_RS23490;product=hypothetical protein;protein_id=WP_000979718.1;transl_table=11
NZ_CAAR01001322.1	RefSeq	gene	2075	2371	.	+	.	ID=gene-STY7866_RS23495;Name=STY7866_RS23495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23495
NZ_CAAR01001322.1	Protein Homology	CDS	2075	2371	.	+	0	ID=cds-WP_000968700.1;Parent=gene-STY7866_RS23495;Dbxref=Genbank:WP_000968700.1;Name=WP_000968700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969000.1;locus_tag=STY7866_RS23495;product=hypothetical protein;protein_id=WP_000968700.1;transl_table=11
NZ_CAAR01001322.1	RefSeq	gene	2449	2907	.	+	.	ID=gene-STY7866_RS23500;Name=STY7866_RS23500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23500
NZ_CAAR01001322.1	Protein Homology	CDS	2449	2907	.	+	0	ID=cds-WP_000115421.1;Parent=gene-STY7866_RS23500;Dbxref=Genbank:WP_000115421.1;Name=WP_000115421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000115421.1;locus_tag=STY7866_RS23500;product=hypothetical protein;protein_id=WP_000115421.1;transl_table=11
NZ_CAAR01001322.1	RefSeq	gene	2996	3594	.	+	.	ID=gene-STY7866_RS23505;Name=STY7866_RS23505;end_range=3594,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23505;partial=true
NZ_CAAR01001322.1	Protein Homology	CDS	2996	3594	.	+	0	ID=cds-WP_001097964.1;Parent=gene-STY7866_RS23505;Dbxref=Genbank:WP_001097964.1;Name=WP_001097964.1;end_range=3594,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458676.1;locus_tag=STY7866_RS23505;partial=true;product=DUF1738 domain-containing protein;protein_id=WP_001097964.1;transl_table=11
##sequence-region NZ_CAAR01001321.1 1 8565
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001321.1	RefSeq	region	1	8565	.	+	.	ID=NZ_CAAR01001321.1:1..8565;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001321.1	RefSeq	gene	57	548	.	+	.	ID=gene-STY7866_RS23410;Name=STY7866_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23410
NZ_CAAR01001321.1	Protein Homology	CDS	57	548	.	+	0	ID=cds-WP_001015488.1;Parent=gene-STY7866_RS23410;Dbxref=Genbank:WP_001015488.1;Name=WP_001015488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015700140.1;locus_tag=STY7866_RS23410;product=hypothetical protein;protein_id=WP_001015488.1;transl_table=11
NZ_CAAR01001321.1	RefSeq	gene	545	880	.	+	.	ID=gene-STY7866_RS23415;Name=STY7866_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23415
NZ_CAAR01001321.1	Protein Homology	CDS	545	880	.	+	0	ID=cds-WP_000826019.1;Parent=gene-STY7866_RS23415;Dbxref=Genbank:WP_000826019.1;Name=WP_000826019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456382.1;locus_tag=STY7866_RS23415;product=hypothetical protein;protein_id=WP_000826019.1;transl_table=11
NZ_CAAR01001321.1	RefSeq	gene	1075	1806	.	+	.	ID=gene-STY7866_RS23420;Name=STY7866_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23420
NZ_CAAR01001321.1	Protein Homology	CDS	1075	1806	.	+	0	ID=cds-WP_000050472.1;Parent=gene-STY7866_RS23420;Dbxref=Genbank:WP_000050472.1;Name=WP_000050472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456381.1;locus_tag=STY7866_RS23420;product=hypothetical protein;protein_id=WP_000050472.1;transl_table=11
NZ_CAAR01001321.1	RefSeq	gene	1806	2234	.	+	.	ID=gene-STY7866_RS23425;Name=STY7866_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23425
NZ_CAAR01001321.1	Protein Homology	CDS	1806	2234	.	+	0	ID=cds-WP_001144794.1;Parent=gene-STY7866_RS23425;Dbxref=Genbank:WP_001144794.1;Name=WP_001144794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456380.1;locus_tag=STY7866_RS23425;product=hypothetical protein;protein_id=WP_001144794.1;transl_table=11
NZ_CAAR01001321.1	RefSeq	gene	2293	3048	.	+	.	ID=gene-STY7866_RS23430;Name=STY7866_RS23430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23430
NZ_CAAR01001321.1	Protein Homology	CDS	2293	3048	.	+	0	ID=cds-WP_001685627.1;Parent=gene-STY7866_RS23430;Dbxref=Genbank:WP_001685627.1;Name=WP_001685627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456379.1;locus_tag=STY7866_RS23430;product=hypothetical protein;protein_id=WP_001685627.1;transl_table=11
NZ_CAAR01001321.1	RefSeq	gene	3136	3273	.	+	.	ID=gene-STY7866_RS23435;Name=STY7866_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23435
NZ_CAAR01001321.1	Protein Homology	CDS	3136	3273	.	+	0	ID=cds-WP_000564971.1;Parent=gene-STY7866_RS23435;Dbxref=Genbank:WP_000564971.1;Name=WP_000564971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456378.1;locus_tag=STY7866_RS23435;product=hypothetical protein;protein_id=WP_000564971.1;transl_table=11
NZ_CAAR01001321.1	RefSeq	gene	3289	3642	.	+	.	ID=gene-STY7866_RS23440;Name=STY7866_RS23440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23440
NZ_CAAR01001321.1	Protein Homology	CDS	3289	3642	.	+	0	ID=cds-WP_001270647.1;Parent=gene-STY7866_RS23440;Dbxref=Genbank:WP_001270647.1;Name=WP_001270647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456377.1;locus_tag=STY7866_RS23440;product=hypothetical protein;protein_id=WP_001270647.1;transl_table=11
NZ_CAAR01001321.1	RefSeq	gene	3643	4842	.	+	.	ID=gene-STY7866_RS23445;Name=STY7866_RS23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23445
NZ_CAAR01001321.1	Protein Homology	CDS	3643	4842	.	+	0	ID=cds-WP_001197092.1;Parent=gene-STY7866_RS23445;Dbxref=Genbank:WP_001197092.1;Name=WP_001197092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456376.1;locus_tag=STY7866_RS23445;product=hypothetical protein;protein_id=WP_001197092.1;transl_table=11
NZ_CAAR01001321.1	RefSeq	gene	4839	5519	.	+	.	ID=gene-STY7866_RS23450;Name=STY7866_RS23450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23450
NZ_CAAR01001321.1	Protein Homology	CDS	4839	5519	.	+	0	ID=cds-WP_000049938.1;Parent=gene-STY7866_RS23450;Dbxref=Genbank:WP_000049938.1;Name=WP_000049938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455549.1;locus_tag=STY7866_RS23450;product=DUF2612 domain-containing protein;protein_id=WP_000049938.1;transl_table=11
NZ_CAAR01001321.1	RefSeq	gene	5519	7030	.	+	.	ID=gene-STY7866_RS23455;Name=STY7866_RS23455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23455
NZ_CAAR01001321.1	Protein Homology	CDS	5519	7030	.	+	0	ID=cds-WP_001681975.1;Parent=gene-STY7866_RS23455;Dbxref=Genbank:WP_001681975.1;Name=WP_001681975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455550.1;locus_tag=STY7866_RS23455;product=hypothetical protein;protein_id=WP_001681975.1;transl_table=11
NZ_CAAR01001321.1	RefSeq	gene	7045	7563	.	+	.	ID=gene-STY7866_RS23460;Name=STY7866_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23460
NZ_CAAR01001321.1	Protein Homology	CDS	7045	7563	.	+	0	ID=cds-WP_000421104.1;Parent=gene-STY7866_RS23460;Dbxref=Genbank:WP_000421104.1;Name=WP_000421104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455551.1;locus_tag=STY7866_RS23460;product=tail fiber assembly protein;protein_id=WP_000421104.1;transl_table=11
NZ_CAAR01001321.1	RefSeq	pseudogene	8149	8354	.	+	.	ID=gene-STY7866_RS29545;Name=STY7866_RS29545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29545;pseudo=true
NZ_CAAR01001321.1	Protein Homology	CDS	8149	8354	.	+	0	ID=cds-STY7866_RS29545;Parent=gene-STY7866_RS29545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000388788.1;locus_tag=STY7866_RS29545;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01001321.1	RefSeq	gene	8486	8565	.	-	.	ID=gene-STY7866_RS29550;Name=STY7866_RS29550;end_range=8565,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29550;partial=true
NZ_CAAR01001321.1	Protein Homology	CDS	8486	8565	.	-	2	ID=cds-WP_151260019.1;Parent=gene-STY7866_RS29550;Dbxref=Genbank:WP_151260019.1;Name=WP_151260019.1;end_range=8565,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455553.1;locus_tag=STY7866_RS29550;partial=true;product=T3SS effector NleG family protein;protein_id=WP_151260019.1;transl_table=11
##sequence-region NZ_CAAR01001320.1 1 3244
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001320.1	RefSeq	region	1	3244	.	+	.	ID=NZ_CAAR01001320.1:1..3244;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001320.1	RefSeq	gene	390	641	.	+	.	ID=gene-STY7866_RS23380;Name=STY7866_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23380
NZ_CAAR01001320.1	Protein Homology	CDS	390	641	.	+	0	ID=cds-WP_001766314.1;Parent=gene-STY7866_RS23380;Dbxref=Genbank:WP_001766314.1;Name=WP_001766314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=STY7866_RS23380;product=acid shock protein;protein_id=WP_001766314.1;transl_table=11
NZ_CAAR01001320.1	RefSeq	gene	910	1731	.	+	.	ID=gene-STY7866_RS23385;Name=STY7866_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23385
NZ_CAAR01001320.1	Protein Homology	CDS	910	1731	.	+	0	ID=cds-WP_000549642.1;Parent=gene-STY7866_RS23385;Dbxref=Genbank:WP_000549642.1;Name=WP_000549642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455996.1;locus_tag=STY7866_RS23385;product=serine protease;protein_id=WP_000549642.1;transl_table=11
NZ_CAAR01001320.1	RefSeq	gene	1766	2095	.	-	.	ID=gene-STY7866_RS23390;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=STY7866_RS23390
NZ_CAAR01001320.1	Protein Homology	CDS	1766	2095	.	-	0	ID=cds-WP_001183821.1;Parent=gene-STY7866_RS23390;Dbxref=Genbank:WP_001183821.1;Name=WP_001183821.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455997.1;locus_tag=STY7866_RS23390;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_001183821.1;transl_table=11
NZ_CAAR01001320.1	RefSeq	gene	2082	2444	.	-	.	ID=gene-STY7866_RS23395;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=STY7866_RS23395
NZ_CAAR01001320.1	Protein Homology	CDS	2082	2444	.	-	0	ID=cds-WP_000500278.1;Parent=gene-STY7866_RS23395;Dbxref=Genbank:WP_000500278.1;Name=WP_000500278.1;gbkey=CDS;gene=mdtJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455998.1;locus_tag=STY7866_RS23395;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000500278.1;transl_table=11
NZ_CAAR01001320.1	RefSeq	gene	2556	2726	.	-	.	ID=gene-STY7866_RS29540;Name=STY7866_RS29540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29540
NZ_CAAR01001320.1	Protein Homology	CDS	2556	2726	.	-	0	ID=cds-WP_001539987.1;Parent=gene-STY7866_RS29540;Dbxref=Genbank:WP_001539987.1;Name=WP_001539987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991983.1;locus_tag=STY7866_RS29540;product=hypothetical protein;protein_id=WP_001539987.1;transl_table=11
NZ_CAAR01001320.1	RefSeq	pseudogene	2861	3244	.	+	.	ID=gene-STY7866_RS23405;Name=STY7866_RS23405;end_range=3244,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23405;partial=true;pseudo=true
NZ_CAAR01001320.1	Protein Homology	CDS	2861	3244	.	+	0	ID=cds-STY7866_RS23405;Parent=gene-STY7866_RS23405;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=3244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455999.1;locus_tag=STY7866_RS23405;partial=true;product=AI-2E family transporter;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001319.1 1 577
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001319.1	RefSeq	region	1	577	.	+	.	ID=NZ_CAAR01001319.1:1..577;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001319.1	RefSeq	gene	40	577	.	-	.	ID=gene-STY7866_RS23370;Name=cof;end_range=577,.;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=STY7866_RS23370;partial=true
NZ_CAAR01001319.1	Protein Homology	CDS	40	577	.	-	1	ID=cds-WP_000962858.1;Parent=gene-STY7866_RS23370;Dbxref=Genbank:WP_000962858.1;Name=WP_000962858.1;end_range=577,.;gbkey=CDS;gene=cof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455054.1;locus_tag=STY7866_RS23370;partial=true;product=HMP-PP phosphatase;protein_id=WP_000962858.1;transl_table=11
##sequence-region NZ_CAAR01001318.1 1 176
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001318.1	RefSeq	region	1	176	.	+	.	ID=NZ_CAAR01001318.1:1..176;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001317.1 1 4100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001317.1	RefSeq	region	1	4100	.	+	.	ID=NZ_CAAR01001317.1:1..4100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001317.1	RefSeq	gene	1	1168	.	-	.	ID=gene-STY7866_RS23360;Name=STY7866_RS23360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23360;partial=true;start_range=.,1
NZ_CAAR01001317.1	Protein Homology	CDS	1	1168	.	-	0	ID=cds-WP_000471801.1;Parent=gene-STY7866_RS23360;Dbxref=Genbank:WP_000471801.1;Name=WP_000471801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=STY7866_RS23360;partial=true;product=DeoR family transcriptional regulator;protein_id=WP_000471801.1;start_range=.,1;transl_table=11
NZ_CAAR01001317.1	RefSeq	pseudogene	1491	4100	.	-	.	ID=gene-STY7866_RS23365;Name=ttrA;end_range=4100,.;gbkey=Gene;gene=ttrA;gene_biotype=pseudogene;locus_tag=STY7866_RS23365;partial=true;pseudo=true
NZ_CAAR01001317.1	Protein Homology	CDS	1491	4100	.	-	1	ID=cds-STY7866_RS23365;Parent=gene-STY7866_RS23365;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=4100,.;gbkey=CDS;gene=ttrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456144.1;locus_tag=STY7866_RS23365;partial=true;product=tetrathionate reductase subunit TtrA;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001316.1 1 6149
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001316.1	RefSeq	region	1	6149	.	+	.	ID=NZ_CAAR01001316.1:1..6149;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001316.1	RefSeq	pseudogene	167	1004	.	+	.	ID=gene-STY7866_RS23325;Name=STY7866_RS23325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23325;pseudo=true
NZ_CAAR01001316.1	Protein Homology	CDS	167	1004	.	+	0	ID=cds-STY7866_RS23325;Parent=gene-STY7866_RS23325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455092.1;locus_tag=STY7866_RS23325;product=DUF1311 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01001316.1	RefSeq	gene	1081	1875	.	+	.	ID=gene-STY7866_RS23330;Name=STY7866_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23330
NZ_CAAR01001316.1	Protein Homology	CDS	1081	1875	.	+	0	ID=cds-WP_000421856.1;Parent=gene-STY7866_RS23330;Dbxref=Genbank:WP_000421856.1;Name=WP_000421856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455091.1;locus_tag=STY7866_RS23330;product=hypothetical protein;protein_id=WP_000421856.1;transl_table=11
NZ_CAAR01001316.1	RefSeq	gene	2076	2555	.	+	.	ID=gene-STY7866_RS23335;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=STY7866_RS23335
NZ_CAAR01001316.1	Protein Homology	CDS	2076	2555	.	+	0	ID=cds-WP_000186620.1;Parent=gene-STY7866_RS23335;Dbxref=Genbank:WP_000186620.1;Name=WP_000186620.1;gbkey=CDS;gene=ybaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=STY7866_RS23335;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186620.1;transl_table=11
NZ_CAAR01001316.1	RefSeq	gene	2672	3526	.	-	.	ID=gene-STY7866_RS29525;Name=STY7866_RS29525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29525
NZ_CAAR01001316.1	Protein Homology	CDS	2672	3526	.	-	0	ID=cds-WP_001803092.1;Parent=gene-STY7866_RS29525;Dbxref=Genbank:WP_001803092.1;Name=WP_001803092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746770.1;locus_tag=STY7866_RS29525;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_001803092.1;transl_table=11
NZ_CAAR01001316.1	RefSeq	gene	3523	4323	.	-	.	ID=gene-STY7866_RS29530;Name=STY7866_RS29530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29530
NZ_CAAR01001316.1	Protein Homology	CDS	3523	4323	.	-	0	ID=cds-WP_001803093.1;Parent=gene-STY7866_RS29530;Dbxref=Genbank:WP_001803093.1;Name=WP_001803093.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PRK09558.1;locus_tag=STY7866_RS29530;product=phosphoesterase;protein_id=WP_001803093.1;transl_table=11
NZ_CAAR01001316.1	RefSeq	gene	4496	5716	.	+	.	ID=gene-STY7866_RS23345;Name=STY7866_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23345
NZ_CAAR01001316.1	Protein Homology	CDS	4496	5716	.	+	0	ID=cds-WP_001251599.1;Parent=gene-STY7866_RS23345;Dbxref=Genbank:WP_001251599.1;Name=WP_001251599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455089.1;locus_tag=STY7866_RS23345;product=MFS transporter;protein_id=WP_001251599.1;transl_table=11
NZ_CAAR01001316.1	RefSeq	pseudogene	5931	6149	.	+	.	ID=gene-STY7866_RS26590;Name=STY7866_RS26590;end_range=6149,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26590;partial=true;pseudo=true
NZ_CAAR01001316.1	Protein Homology	CDS	5931	6149	.	+	0	ID=cds-STY7866_RS26590;Parent=gene-STY7866_RS26590;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=6149,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455088.1;locus_tag=STY7866_RS26590;partial=true;product=cation:proton antiport protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001315.1 1 2810
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001315.1	RefSeq	region	1	2810	.	+	.	ID=NZ_CAAR01001315.1:1..2810;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001315.1	RefSeq	gene	1	763	.	+	.	ID=gene-STY7866_RS23315;Name=STY7866_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23315;partial=true;start_range=.,1
NZ_CAAR01001315.1	Protein Homology	CDS	1	763	.	+	1	ID=cds-WP_000474185.1;Parent=gene-STY7866_RS23315;Dbxref=Genbank:WP_000474185.1;Name=WP_000474185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458434.1;locus_tag=STY7866_RS23315;partial=true;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_000474185.1;start_range=.,1;transl_table=11
NZ_CAAR01001315.1	RefSeq	pseudogene	806	2810	.	-	.	ID=gene-STY7866_RS23320;Name=STY7866_RS23320;end_range=2810,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23320;partial=true;pseudo=true
NZ_CAAR01001315.1	Protein Homology	CDS	806	2810	.	-	1	ID=cds-STY7866_RS23320;Parent=gene-STY7866_RS23320;Note=internal stop%3B incomplete%3B missing N-terminus;end_range=2810,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462370.1;locus_tag=STY7866_RS23320;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001314.1 1 1194
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001314.1	RefSeq	region	1	1194	.	+	.	ID=NZ_CAAR01001314.1:1..1194;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001314.1	RefSeq	pseudogene	1	760	.	+	.	ID=gene-STY7866_RS23305;Name=STY7866_RS23305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23305;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001314.1	Protein Homology	CDS	1	760	.	+	1	ID=cds-STY7866_RS23305;Parent=gene-STY7866_RS23305;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463350.1;locus_tag=STY7866_RS23305;partial=true;product=ATP-dependent Lon protease;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001314.1	RefSeq	pseudogene	932	1194	.	-	.	ID=gene-STY7866_RS23310;Name=STY7866_RS23310;end_range=1194,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23310;partial=true;pseudo=true
NZ_CAAR01001314.1	Protein Homology	CDS	932	1194	.	-	2	ID=cds-STY7866_RS23310;Parent=gene-STY7866_RS23310;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1194,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=STY7866_RS23310;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001313.1 1 2394
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001313.1	RefSeq	region	1	2394	.	+	.	ID=NZ_CAAR01001313.1:1..2394;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001313.1	RefSeq	pseudogene	33	393	.	-	.	ID=gene-STY7866_RS29520;Name=STY7866_RS29520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29520;pseudo=true
NZ_CAAR01001313.1	Protein Homology	CDS	33	393	.	-	0	ID=cds-STY7866_RS29520;Parent=gene-STY7866_RS29520;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016063166.1;locus_tag=STY7866_RS29520;product=LexA family transcriptional regulator;pseudo=true;transl_table=11
NZ_CAAR01001313.1	RefSeq	pseudogene	701	1923	.	+	.	ID=gene-STY7866_RS23295;Name=STY7866_RS23295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23295;pseudo=true
NZ_CAAR01001313.1	Protein Homology	CDS	701	1923	.	+	0	ID=cds-STY7866_RS23295;Parent=gene-STY7866_RS23295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456180.1;locus_tag=STY7866_RS23295;product=O-antigen polymerase;pseudo=true;transl_table=11
NZ_CAAR01001313.1	RefSeq	gene	2246	2394	.	-	.	ID=gene-STY7866_RS23300;Name=STY7866_RS23300;end_range=2394,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23300;partial=true
NZ_CAAR01001313.1	Protein Homology	CDS	2246	2394	.	-	2	ID=cds-WP_031626549.1;Parent=gene-STY7866_RS23300;Dbxref=Genbank:WP_031626549.1;Name=WP_031626549.1;end_range=2394,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447756.1;locus_tag=STY7866_RS23300;partial=true;product=hypothetical protein;protein_id=WP_031626549.1;transl_table=11
##sequence-region NZ_CAAR01001312.1 1 5666
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001312.1	RefSeq	region	1	5666	.	+	.	ID=NZ_CAAR01001312.1:1..5666;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001312.1	RefSeq	gene	1	849	.	+	.	ID=gene-STY7866_RS23260;Name=STY7866_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23260
NZ_CAAR01001312.1	Protein Homology	CDS	1	849	.	+	0	ID=cds-WP_031626548.1;Parent=gene-STY7866_RS23260;Dbxref=Genbank:WP_031626548.1;Name=WP_031626548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456761.1;locus_tag=STY7866_RS23260;product=deoxyribonuclease IV;protein_id=WP_031626548.1;transl_table=11
NZ_CAAR01001312.1	RefSeq	gene	914	2602	.	-	.	ID=gene-STY7866_RS23265;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=STY7866_RS23265
NZ_CAAR01001312.1	Protein Homology	CDS	914	2602	.	-	0	ID=cds-WP_000854408.1;Parent=gene-STY7866_RS23265;Dbxref=Genbank:WP_000854408.1;Name=WP_000854408.1;gbkey=CDS;gene=fruA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456762.1;locus_tag=STY7866_RS23265;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854408.1;transl_table=11
NZ_CAAR01001312.1	RefSeq	gene	2619	3557	.	-	.	ID=gene-STY7866_RS23270;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=STY7866_RS23270
NZ_CAAR01001312.1	Protein Homology	CDS	2619	3557	.	-	0	ID=cds-WP_000091250.1;Parent=gene-STY7866_RS23270;Dbxref=Genbank:WP_000091250.1;Name=WP_000091250.1;gbkey=CDS;gene=fruK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456763.1;locus_tag=STY7866_RS23270;product=1-phosphofructokinase;protein_id=WP_000091250.1;transl_table=11
NZ_CAAR01001312.1	RefSeq	gene	3557	4687	.	-	.	ID=gene-STY7866_RS23275;Name=STY7866_RS23275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23275
NZ_CAAR01001312.1	Protein Homology	CDS	3557	4687	.	-	0	ID=cds-WP_000487287.1;Parent=gene-STY7866_RS23275;Dbxref=Genbank:WP_000487287.1;Name=WP_000487287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=STY7866_RS23275;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487287.1;transl_table=11
NZ_CAAR01001312.1	RefSeq	gene	5058	5666	.	+	.	ID=gene-STY7866_RS23285;Name=STY7866_RS23285;end_range=5666,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23285;partial=true
NZ_CAAR01001312.1	Protein Homology	CDS	5058	5666	.	+	0	ID=cds-WP_000551930.1;Parent=gene-STY7866_RS23285;Dbxref=Genbank:WP_000551930.1;Name=WP_000551930.1;end_range=5666,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456765.1;locus_tag=STY7866_RS23285;partial=true;product=MFS transporter;protein_id=WP_000551930.1;transl_table=11
##sequence-region NZ_CAAR01001311.1 1 2527
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001311.1	RefSeq	region	1	2527	.	+	.	ID=NZ_CAAR01001311.1:1..2527;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001311.1	RefSeq	pseudogene	1	2527	.	-	.	ID=gene-STY7866_RS23255;Name=STY7866_RS23255;end_range=2527,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23255;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001311.1	Protein Homology	CDS	1	2527	.	-	1	ID=cds-STY7866_RS23255;Parent=gene-STY7866_RS23255;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=2527,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457048.1;locus_tag=STY7866_RS23255;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001310.1 1 1295
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001310.1	RefSeq	region	1	1295	.	+	.	ID=NZ_CAAR01001310.1:1..1295;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001310.1	RefSeq	gene	69	578	.	-	.	ID=gene-STY7866_RS23245;Name=STY7866_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23245
NZ_CAAR01001310.1	Protein Homology	CDS	69	578	.	-	0	ID=cds-WP_000522253.1;Parent=gene-STY7866_RS23245;Dbxref=Genbank:WP_000522253.1;Name=WP_000522253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=STY7866_RS23245;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11
NZ_CAAR01001310.1	RefSeq	gene	619	1295	.	-	.	ID=gene-STY7866_RS23250;Name=ptsP;end_range=1295,.;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=STY7866_RS23250;partial=true
NZ_CAAR01001310.1	Protein Homology	CDS	619	1295	.	-	2	ID=cds-WP_000294335.1;Parent=gene-STY7866_RS23250;Dbxref=Genbank:WP_000294335.1;Name=WP_000294335.1;end_range=1295,.;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=STY7866_RS23250;partial=true;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000294335.1;transl_table=11
##sequence-region NZ_CAAR01001309.1 1 3146
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001309.1	RefSeq	region	1	3146	.	+	.	ID=NZ_CAAR01001309.1:1..3146;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001309.1	RefSeq	pseudogene	1	76	.	+	.	ID=gene-STY7866_RS29515;Name=STY7866_RS29515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29515;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001309.1	Protein Homology	CDS	1	76	.	+	1	ID=cds-STY7866_RS29515;Parent=gene-STY7866_RS29515;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001346942.1;locus_tag=STY7866_RS29515;partial=true;product=respiratory nitrate reductase subunit beta;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001309.1	RefSeq	gene	73	783	.	+	.	ID=gene-STY7866_RS23225;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=STY7866_RS23225
NZ_CAAR01001309.1	Protein Homology	CDS	73	783	.	+	0	ID=cds-WP_000571671.1;Parent=gene-STY7866_RS23225;Dbxref=Genbank:WP_000571671.1;Name=WP_000571671.1;gbkey=CDS;gene=narJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455741.1;locus_tag=STY7866_RS23225;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571671.1;transl_table=11
NZ_CAAR01001309.1	RefSeq	gene	783	1460	.	+	.	ID=gene-STY7866_RS23230;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=STY7866_RS23230
NZ_CAAR01001309.1	Protein Homology	CDS	783	1460	.	+	0	ID=cds-WP_000545591.1;Parent=gene-STY7866_RS23230;Dbxref=Genbank:WP_000545591.1;Name=WP_000545591.1;gbkey=CDS;gene=narI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455742.1;locus_tag=STY7866_RS23230;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000545591.1;transl_table=11
NZ_CAAR01001309.1	RefSeq	gene	1702	3146	.	+	.	ID=gene-STY7866_RS23240;Name=STY7866_RS23240;end_range=3146,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23240;partial=true
NZ_CAAR01001309.1	Protein Homology	CDS	1702	3146	.	+	0	ID=cds-WP_001212715.1;Parent=gene-STY7866_RS23240;Dbxref=Genbank:WP_001212715.1;Name=WP_001212715.1;end_range=3146,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455743.1;locus_tag=STY7866_RS23240;partial=true;product=sel1 repeat family protein;protein_id=WP_001212715.1;transl_table=11
##sequence-region NZ_CAAR01001308.1 1 3559
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001308.1	RefSeq	region	1	3559	.	+	.	ID=NZ_CAAR01001308.1:1..3559;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001308.1	RefSeq	pseudogene	1	96	.	+	.	ID=gene-STY7866_RS29510;Name=STY7866_RS29510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29510;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001308.1	Protein Homology	CDS	1	96	.	+	0	ID=cds-STY7866_RS29510;Parent=gene-STY7866_RS29510;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455880.1;locus_tag=STY7866_RS29510;partial=true;product=epimerase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001308.1	RefSeq	gene	112	903	.	+	.	ID=gene-STY7866_RS23200;Name=STY7866_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23200
NZ_CAAR01001308.1	Protein Homology	CDS	112	903	.	+	0	ID=cds-WP_001670738.1;Parent=gene-STY7866_RS23200;Dbxref=Genbank:WP_001670738.1;Name=WP_001670738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455879.1;locus_tag=STY7866_RS23200;product=DeoR/GlpR transcriptional regulator;protein_id=WP_001670738.1;transl_table=11
NZ_CAAR01001308.1	RefSeq	gene	903	1421	.	+	.	ID=gene-STY7866_RS23205;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=STY7866_RS23205
NZ_CAAR01001308.1	Protein Homology	CDS	903	1421	.	+	0	ID=cds-WP_000354857.1;Parent=gene-STY7866_RS23205;Dbxref=Genbank:WP_000354857.1;Name=WP_000354857.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_455878.1;locus_tag=STY7866_RS23205;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WP_000354857.1;transl_table=11
NZ_CAAR01001308.1	RefSeq	gene	1395	2597	.	-	.	ID=gene-STY7866_RS23210;Name=STY7866_RS23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23210
NZ_CAAR01001308.1	Protein Homology	CDS	1395	2597	.	-	0	ID=cds-WP_000848085.1;Parent=gene-STY7866_RS23210;Dbxref=Genbank:WP_000848085.1;Name=WP_000848085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455877.1;locus_tag=STY7866_RS23210;product=glycolate oxidase;protein_id=WP_000848085.1;transl_table=11
NZ_CAAR01001308.1	RefSeq	gene	2609	3184	.	-	.	ID=gene-STY7866_RS23215;Name=STY7866_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23215
NZ_CAAR01001308.1	Protein Homology	CDS	2609	3184	.	-	0	ID=cds-WP_001024312.1;Parent=gene-STY7866_RS23215;Dbxref=Genbank:WP_001024312.1;Name=WP_001024312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455876.1;locus_tag=STY7866_RS23215;product=polyisoprenoid-binding protein;protein_id=WP_001024312.1;transl_table=11
NZ_CAAR01001308.1	RefSeq	pseudogene	3380	3559	.	-	.	ID=gene-STY7866_RS26585;Name=mdoD;end_range=3559,.;gbkey=Gene;gene=mdoD;gene_biotype=pseudogene;gene_synonym=opgD;locus_tag=STY7866_RS26585;partial=true;pseudo=true
NZ_CAAR01001308.1	Protein Homology	CDS	3380	3559	.	-	0	ID=cds-STY7866_RS26585;Parent=gene-STY7866_RS26585;Note=involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3559,.;gbkey=CDS;gene=mdoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455875.1;locus_tag=STY7866_RS26585;partial=true;product=glucan biosynthesis protein D;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001307.1 1 2199
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001307.1	RefSeq	region	1	2199	.	+	.	ID=NZ_CAAR01001307.1:1..2199;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001307.1	RefSeq	gene	1	2038	.	+	.	ID=gene-STY7866_RS23185;Name=STY7866_RS23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23185;partial=true;start_range=.,1
NZ_CAAR01001307.1	Protein Homology	CDS	1	2038	.	+	1	ID=cds-WP_000463475.1;Parent=gene-STY7866_RS23185;Dbxref=Genbank:WP_000463475.1;Name=WP_000463475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457404.1;locus_tag=STY7866_RS23185;partial=true;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000463475.1;start_range=.,1;transl_table=11
NZ_CAAR01001307.1	RefSeq	pseudogene	2031	2199	.	+	.	ID=gene-STY7866_RS29505;Name=STY7866_RS29505;end_range=2199,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29505;partial=true;pseudo=true
NZ_CAAR01001307.1	Protein Homology	CDS	2031	2199	.	+	0	ID=cds-STY7866_RS29505;Parent=gene-STY7866_RS29505;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2199,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457403.1;locus_tag=STY7866_RS29505;partial=true;product=MFS transporter;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001306.1 1 798
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001306.1	RefSeq	region	1	798	.	+	.	ID=NZ_CAAR01001306.1:1..798;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001306.1	RefSeq	gene	1	798	.	+	.	ID=gene-STY7866_RS23180;Name=dcuC;end_range=798,.;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=STY7866_RS23180;partial=true;start_range=.,1
NZ_CAAR01001306.1	Protein Homology	CDS	1	798	.	+	1	ID=cds-WP_000675027.1;Parent=gene-STY7866_RS23180;Dbxref=Genbank:WP_000675027.1;Name=WP_000675027.1;end_range=798,.;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455204.1;locus_tag=STY7866_RS23180;partial=true;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000675027.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001305.1 1 6121
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001305.1	RefSeq	region	1	6121	.	+	.	ID=NZ_CAAR01001305.1:1..6121;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001305.1	RefSeq	gene	1	376	.	+	.	ID=gene-STY7866_RS23135;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=STY7866_RS23135;partial=true;start_range=.,1
NZ_CAAR01001305.1	Protein Homology	CDS	1	376	.	+	1	ID=cds-WP_000485436.1;Parent=gene-STY7866_RS23135;Dbxref=Genbank:WP_000485436.1;Name=WP_000485436.1;gbkey=CDS;gene=rlmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458805.1;locus_tag=STY7866_RS23135;partial=true;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_000485436.1;start_range=.,1;transl_table=11
NZ_CAAR01001305.1	RefSeq	gene	508	912	.	+	.	ID=gene-STY7866_RS23140;Name=STY7866_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23140
NZ_CAAR01001305.1	Protein Homology	CDS	508	912	.	+	0	ID=cds-WP_000312608.1;Parent=gene-STY7866_RS23140;Dbxref=Genbank:WP_000312608.1;Name=WP_000312608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458806.1;locus_tag=STY7866_RS23140;product=DUF2170 family protein;protein_id=WP_000312608.1;transl_table=11
NZ_CAAR01001305.1	RefSeq	gene	927	1625	.	+	.	ID=gene-STY7866_RS23145;Name=STY7866_RS23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23145
NZ_CAAR01001305.1	Protein Homology	CDS	927	1625	.	+	0	ID=cds-WP_000511978.1;Parent=gene-STY7866_RS23145;Dbxref=Genbank:WP_000511978.1;Name=WP_000511978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=STY7866_RS23145;product=PspA/IM30 family protein;protein_id=WP_000511978.1;transl_table=11
NZ_CAAR01001305.1	RefSeq	gene	1849	2532	.	+	.	ID=gene-STY7866_RS23155;Name=STY7866_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23155
NZ_CAAR01001305.1	Protein Homology	CDS	1849	2532	.	+	0	ID=cds-WP_000090298.1;Parent=gene-STY7866_RS23155;Dbxref=Genbank:WP_000090298.1;Name=WP_000090298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458807.1;locus_tag=STY7866_RS23155;product=YjfK family protein;protein_id=WP_000090298.1;transl_table=11
NZ_CAAR01001305.1	RefSeq	pseudogene	2550	2950	.	+	.	ID=gene-STY7866_RS23160;Name=STY7866_RS23160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23160;pseudo=true
NZ_CAAR01001305.1	Protein Homology	CDS	2550	2950	.	+	0	ID=cds-STY7866_RS23160;Parent=gene-STY7866_RS23160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458808.1;locus_tag=STY7866_RS23160;product=DUF350 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01001305.1	RefSeq	gene	2960	3598	.	+	.	ID=gene-STY7866_RS23165;Name=STY7866_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23165
NZ_CAAR01001305.1	Protein Homology	CDS	2960	3598	.	+	0	ID=cds-WP_001085609.1;Parent=gene-STY7866_RS23165;Dbxref=Genbank:WP_001085609.1;Name=WP_001085609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458809.1;locus_tag=STY7866_RS23165;product=DUF1190 domain-containing protein;protein_id=WP_001085609.1;transl_table=11
NZ_CAAR01001305.1	RefSeq	gene	3601	4764	.	+	.	ID=gene-STY7866_RS23170;Name=STY7866_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23170
NZ_CAAR01001305.1	Protein Homology	CDS	3601	4764	.	+	0	ID=cds-WP_000943948.1;Parent=gene-STY7866_RS23170;Dbxref=Genbank:WP_000943948.1;Name=WP_000943948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458810.1;locus_tag=STY7866_RS23170;product=glutathionylspermidine synthase family protein;protein_id=WP_000943948.1;transl_table=11
NZ_CAAR01001305.1	RefSeq	gene	4849	6121	.	+	.	ID=gene-STY7866_RS23175;Name=STY7866_RS23175;end_range=6121,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23175;partial=true
NZ_CAAR01001305.1	Protein Homology	CDS	4849	6121	.	+	0	ID=cds-WP_000118987.1;Parent=gene-STY7866_RS23175;Dbxref=Genbank:WP_000118987.1;Name=WP_000118987.1;end_range=6121,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458811.3;locus_tag=STY7866_RS23175;partial=true;product=isovaleryl-CoA dehydrogenase;protein_id=WP_000118987.1;transl_table=11
##sequence-region NZ_CAAR01001304.1 1 4872
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001304.1	RefSeq	region	1	4872	.	+	.	ID=NZ_CAAR01001304.1:1..4872;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001304.1	RefSeq	gene	1	2252	.	-	.	ID=gene-STY7866_RS23110;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=STY7866_RS23110;partial=true;start_range=.,1
NZ_CAAR01001304.1	Protein Homology	CDS	1	2252	.	-	0	ID=cds-WP_001292714.1;Parent=gene-STY7866_RS23110;Dbxref=Genbank:WP_001292714.1;Name=WP_001292714.1;gbkey=CDS;gene=opgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458956.1;locus_tag=STY7866_RS23110;partial=true;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_001292714.1;start_range=.,1;transl_table=11
NZ_CAAR01001304.1	RefSeq	gene	2535	2996	.	-	.	ID=gene-STY7866_RS23115;Name=STY7866_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23115
NZ_CAAR01001304.1	Protein Homology	CDS	2535	2996	.	-	0	ID=cds-WP_001090314.1;Parent=gene-STY7866_RS23115;Dbxref=Genbank:WP_001090314.1;Name=WP_001090314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458957.1;locus_tag=STY7866_RS23115;product=DUF2501 domain-containing protein;protein_id=WP_001090314.1;transl_table=11
NZ_CAAR01001304.1	RefSeq	gene	3054	3791	.	-	.	ID=gene-STY7866_RS23120;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=STY7866_RS23120
NZ_CAAR01001304.1	Protein Homology	CDS	3054	3791	.	-	0	ID=cds-WP_000799923.1;Parent=gene-STY7866_RS23120;Dbxref=Genbank:WP_000799923.1;Name=WP_000799923.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001731874.1;locus_tag=STY7866_RS23120;product=DNA replication protein DnaC;protein_id=WP_000799923.1;transl_table=11
NZ_CAAR01001304.1	RefSeq	gene	3794	4333	.	-	.	ID=gene-STY7866_RS23125;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=STY7866_RS23125
NZ_CAAR01001304.1	Protein Homology	CDS	3794	4333	.	-	0	ID=cds-WP_000098578.1;Parent=gene-STY7866_RS23125;Dbxref=Genbank:WP_000098578.1;Name=WP_000098578.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458959.1;locus_tag=STY7866_RS23125;product=primosomal protein DnaT;protein_id=WP_000098578.1;transl_table=11
NZ_CAAR01001304.1	RefSeq	gene	4426	4869	.	-	.	ID=gene-STY7866_RS23130;Name=STY7866_RS23130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23130
NZ_CAAR01001304.1	Protein Homology	CDS	4426	4869	.	-	0	ID=cds-WP_001153632.1;Parent=gene-STY7866_RS23130;Dbxref=Genbank:WP_001153632.1;Name=WP_001153632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004128658.1;locus_tag=STY7866_RS23130;product=threonine/serine exporter;protein_id=WP_001153632.1;transl_table=11
##sequence-region NZ_CAAR01001303.1 1 1619
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001303.1	RefSeq	region	1	1619	.	+	.	ID=NZ_CAAR01001303.1:1..1619;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001303.1	RefSeq	pseudogene	1	792	.	-	.	ID=gene-STY7866_RS23095;Name=STY7866_RS23095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23095;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001303.1	Protein Homology	CDS	1	792	.	-	0	ID=cds-STY7866_RS23095;Parent=gene-STY7866_RS23095;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458895.1;locus_tag=STY7866_RS23095;partial=true;product=leucyl aminopeptidase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001303.1	RefSeq	gene	1187	1619	.	+	.	ID=gene-STY7866_RS23105;Name=STY7866_RS23105;end_range=1619,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23105;partial=true
NZ_CAAR01001303.1	Protein Homology	CDS	1187	1619	.	+	0	ID=cds-WP_151260018.1;Parent=gene-STY7866_RS23105;Dbxref=Genbank:WP_151260018.1;Name=WP_151260018.1;end_range=1619,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458896.1;locus_tag=STY7866_RS23105;partial=true;product=LptF/LptG family permease;protein_id=WP_151260018.1;transl_table=11
##sequence-region NZ_CAAR01001302.1 1 28416
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001302.1	RefSeq	region	1	28416	.	+	.	ID=NZ_CAAR01001302.1:1..28416;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001302.1	RefSeq	gene	1	98	.	-	.	ID=gene-STY7866_RS29500;Name=STY7866_RS29500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29500;partial=true;start_range=.,1
NZ_CAAR01001302.1	Protein Homology	CDS	1	98	.	-	0	ID=cds-WP_141087726.1;Parent=gene-STY7866_RS29500;Dbxref=Genbank:WP_141087726.1;Name=WP_141087726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456501.1;locus_tag=STY7866_RS29500;partial=true;product=hypothetical protein;protein_id=WP_141087726.1;start_range=.,1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	325	564	.	+	.	ID=gene-STY7866_RS22945;Name=STY7866_RS22945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22945
NZ_CAAR01001302.1	Protein Homology	CDS	325	564	.	+	0	ID=cds-WP_000377238.1;Parent=gene-STY7866_RS22945;Dbxref=Genbank:WP_000377238.1;Name=WP_000377238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456500.1;locus_tag=STY7866_RS22945;product=YecH family protein;protein_id=WP_000377238.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	610	1107	.	-	.	ID=gene-STY7866_RS22950;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=STY7866_RS22950
NZ_CAAR01001302.1	Protein Homology	CDS	610	1107	.	-	0	ID=cds-WP_000920615.1;Parent=gene-STY7866_RS22950;Dbxref=Genbank:WP_000920615.1;Name=WP_000920615.1;gbkey=CDS;gene=ftnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=STY7866_RS22950;product=non-heme ferritin;protein_id=WP_000920615.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	1347	1682	.	-	.	ID=gene-STY7866_RS22955;Name=STY7866_RS22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22955
NZ_CAAR01001302.1	Protein Homology	CDS	1347	1682	.	-	0	ID=cds-WP_000803230.1;Parent=gene-STY7866_RS22955;Dbxref=Genbank:WP_000803230.1;Name=WP_000803230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456498.1;locus_tag=STY7866_RS22955;product=lipoprotein;protein_id=WP_000803230.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	2013	2516	.	-	.	ID=gene-STY7866_RS22960;Name=STY7866_RS22960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22960
NZ_CAAR01001302.1	Protein Homology	CDS	2013	2516	.	-	0	ID=cds-WP_000741707.1;Parent=gene-STY7866_RS22960;Dbxref=Genbank:WP_000741707.1;Name=WP_000741707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456497.1;locus_tag=STY7866_RS22960;product=non-heme ferritin-like protein;protein_id=WP_000741707.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	3066	3623	.	+	.	ID=gene-STY7866_RS22965;Name=STY7866_RS22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22965
NZ_CAAR01001302.1	Protein Homology	CDS	3066	3623	.	+	0	ID=cds-WP_000754799.1;Parent=gene-STY7866_RS22965;Dbxref=Genbank:WP_000754799.1;Name=WP_000754799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456496.1;locus_tag=STY7866_RS22965;product=DJ-1/PfpI family protein;protein_id=WP_000754799.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	pseudogene	3858	4034	.	+	.	ID=gene-STY7866_RS22970;Name=araH;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=STY7866_RS22970;partial=true;pseudo=true;start_range=.,3858
NZ_CAAR01001302.1	Protein Homology	CDS	3858	4034	.	+	0	ID=cds-STY7866_RS22970;Parent=gene-STY7866_RS22970;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=STY7866_RS22970;partial=true;product=L-arabinose ABC transporter permease AraH;pseudo=true;start_range=.,3858;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	4257	5060	.	+	.	ID=gene-STY7866_RS22975;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=STY7866_RS22975
NZ_CAAR01001302.1	Protein Homology	CDS	4257	5060	.	+	0	ID=cds-WP_000840119.1;Parent=gene-STY7866_RS22975;Dbxref=Genbank:WP_000840119.1;Name=WP_000840119.1;gbkey=CDS;gene=otsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456495.1;locus_tag=STY7866_RS22975;product=trehalose-phosphatase;protein_id=WP_000840119.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	5035	6456	.	+	.	ID=gene-STY7866_RS22980;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=STY7866_RS22980
NZ_CAAR01001302.1	Protein Homology	CDS	5035	6456	.	+	0	ID=cds-WP_000089042.1;Parent=gene-STY7866_RS22980;Dbxref=Genbank:WP_000089042.1;Name=WP_000089042.1;gbkey=CDS;gene=otsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456494.1;locus_tag=STY7866_RS22980;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_000089042.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	pseudogene	6474	6901	.	-	.	ID=gene-STY7866_RS22985;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=pseudogene;locus_tag=STY7866_RS22985;pseudo=true
NZ_CAAR01001302.1	Protein Homology	CDS	6474	6901	.	-	0	ID=cds-STY7866_RS22985;Parent=gene-STY7866_RS22985;Note=frameshifted;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=STY7866_RS22985;product=universal stress protein UspC;pseudo=true;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	6898	7014	.	-	.	ID=gene-STY7866_RS22990;Name=STY7866_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22990
NZ_CAAR01001302.1	Protein Homology	CDS	6898	7014	.	-	0	ID=cds-WP_001617301.1;Parent=gene-STY7866_RS22990;Dbxref=Genbank:WP_001617301.1;Name=WP_001617301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=STY7866_RS22990;product=hypothetical protein;protein_id=WP_001617301.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	7688	8038	.	+	.	ID=gene-STY7866_RS22995;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=STY7866_RS22995
NZ_CAAR01001302.1	Protein Homology	CDS	7688	8038	.	+	0	ID=cds-WP_000537050.1;Parent=gene-STY7866_RS22995;Dbxref=Genbank:WP_000537050.1;Name=WP_000537050.1;gbkey=CDS;gene=flhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456491.1;locus_tag=STY7866_RS22995;product=flagellar transcriptional regulator FlhD;protein_id=WP_000537050.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	8035	8619	.	+	.	ID=gene-STY7866_RS23000;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=STY7866_RS23000
NZ_CAAR01001302.1	Protein Homology	CDS	8035	8619	.	+	0	ID=cds-WP_000605989.1;Parent=gene-STY7866_RS23000;Dbxref=Genbank:WP_000605989.1;Name=WP_000605989.1;gbkey=CDS;gene=flhC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456490.1;locus_tag=STY7866_RS23000;product=flagellar transcriptional regulator FlhC;protein_id=WP_000605989.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	8749	9636	.	+	.	ID=gene-STY7866_RS23005;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=STY7866_RS23005
NZ_CAAR01001302.1	Protein Homology	CDS	8749	9636	.	+	0	ID=cds-WP_000906317.1;Parent=gene-STY7866_RS23005;Dbxref=Genbank:WP_000906317.1;Name=WP_000906317.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456489.1;locus_tag=STY7866_RS23005;product=flagellar motor stator protein MotA;protein_id=WP_000906317.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	9633	10562	.	+	.	ID=gene-STY7866_RS23010;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=STY7866_RS23010
NZ_CAAR01001302.1	Protein Homology	CDS	9633	10562	.	+	0	ID=cds-WP_000795656.1;Parent=gene-STY7866_RS23010;Dbxref=Genbank:WP_000795656.1;Name=WP_000795656.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456488.1;locus_tag=STY7866_RS23010;product=flagellar motor protein MotB;protein_id=WP_000795656.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	10567	12582	.	+	.	ID=gene-STY7866_RS23015;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=STY7866_RS23015
NZ_CAAR01001302.1	Protein Homology	CDS	10567	12582	.	+	0	ID=cds-WP_000061308.1;Parent=gene-STY7866_RS23015;Dbxref=Genbank:WP_000061308.1;Name=WP_000061308.1;gbkey=CDS;gene=cheA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456487.1;locus_tag=STY7866_RS23015;product=chemotaxis protein CheA;protein_id=WP_000061308.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	12603	13106	.	+	.	ID=gene-STY7866_RS23020;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=STY7866_RS23020
NZ_CAAR01001302.1	Protein Homology	CDS	12603	13106	.	+	0	ID=cds-WP_000147296.1;Parent=gene-STY7866_RS23020;Dbxref=Genbank:WP_000147296.1;Name=WP_000147296.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456486.1;locus_tag=STY7866_RS23020;product=chemotaxis protein CheW;protein_id=WP_000147296.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	13343	15004	.	+	.	ID=gene-STY7866_RS23030;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=STY7866_RS23030
NZ_CAAR01001302.1	Protein Homology	CDS	13343	15004	.	+	0	ID=cds-WP_000483273.1;Parent=gene-STY7866_RS23030;Dbxref=Genbank:WP_000483273.1;Name=WP_000483273.1;gbkey=CDS;gene=tar;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456485.1;locus_tag=STY7866_RS23030;product=methyl-accepting chemotaxis protein II;protein_id=WP_000483273.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	15165	16031	.	+	.	ID=gene-STY7866_RS23035;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=STY7866_RS23035
NZ_CAAR01001302.1	Protein Homology	CDS	15165	16031	.	+	0	ID=cds-WP_000204368.1;Parent=gene-STY7866_RS23035;Dbxref=Genbank:WP_000204368.1;Name=WP_000204368.1;gbkey=CDS;gene=cheR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456484.1;locus_tag=STY7866_RS23035;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204368.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	16028	17077	.	+	.	ID=gene-STY7866_RS23040;Name=STY7866_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23040
NZ_CAAR01001302.1	Protein Homology	CDS	16028	17077	.	+	0	ID=cds-WP_000036392.1;Parent=gene-STY7866_RS23040;Dbxref=Genbank:WP_000036392.1;Name=WP_000036392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=STY7866_RS23040;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_000036392.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	17095	17484	.	+	.	ID=gene-STY7866_RS23045;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=STY7866_RS23045
NZ_CAAR01001302.1	Protein Homology	CDS	17095	17484	.	+	0	ID=cds-WP_000763861.1;Parent=gene-STY7866_RS23045;Dbxref=Genbank:WP_000763861.1;Name=WP_000763861.1;gbkey=CDS;gene=cheY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127682.1;locus_tag=STY7866_RS23045;product=chemotaxis protein CheY;protein_id=WP_000763861.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	pseudogene	17495	18138	.	+	.	ID=gene-STY7866_RS23050;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=pseudogene;locus_tag=STY7866_RS23050;pseudo=true
NZ_CAAR01001302.1	Protein Homology	CDS	17495	18138	.	+	0	ID=cds-STY7866_RS23050;Parent=gene-STY7866_RS23050;Note=frameshifted;gbkey=CDS;gene=cheZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456481.1;locus_tag=STY7866_RS23050;product=protein phosphatase CheZ;pseudo=true;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	18332	19483	.	+	.	ID=gene-STY7866_RS23055;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=STY7866_RS23055
NZ_CAAR01001302.1	Protein Homology	CDS	18332	19483	.	+	0	ID=cds-WP_000797087.1;Parent=gene-STY7866_RS23055;Dbxref=Genbank:WP_000797087.1;Name=WP_000797087.1;gbkey=CDS;gene=flhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456480.1;locus_tag=STY7866_RS23055;product=flagellar type III secretion system protein FlhB;protein_id=WP_000797087.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	19476	21554	.	+	.	ID=gene-STY7866_RS23060;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=STY7866_RS23060
NZ_CAAR01001302.1	Protein Homology	CDS	19476	21554	.	+	0	ID=cds-WP_000002392.1;Parent=gene-STY7866_RS23060;Dbxref=Genbank:WP_000002392.1;Name=WP_000002392.1;gbkey=CDS;gene=flhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131976.1;locus_tag=STY7866_RS23060;product=flagellar biosynthesis protein FlhA;protein_id=WP_000002392.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	21554	21946	.	+	.	ID=gene-STY7866_RS23065;Name=flhe;gbkey=Gene;gene=flhe;gene_biotype=protein_coding;locus_tag=STY7866_RS23065
NZ_CAAR01001302.1	Protein Homology	CDS	21554	21946	.	+	0	ID=cds-WP_001233619.1;Parent=gene-STY7866_RS23065;Dbxref=Genbank:WP_001233619.1;Name=WP_001233619.1;gbkey=CDS;gene=flhe;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456478.1;locus_tag=STY7866_RS23065;product=flagellar protein FlhE;protein_id=WP_001233619.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	22183	23322	.	+	.	ID=gene-STY7866_RS23070;Name=STY7866_RS23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23070
NZ_CAAR01001302.1	Protein Homology	CDS	22183	23322	.	+	0	ID=cds-WP_000989911.1;Parent=gene-STY7866_RS23070;Dbxref=Genbank:WP_000989911.1;Name=WP_000989911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=STY7866_RS23070;product=glycoside hydrolase family 105 protein;protein_id=WP_000989911.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	pseudogene	23376	25247	.	-	.	ID=gene-STY7866_RS23075;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=pseudogene;locus_tag=STY7866_RS23075;pseudo=true
NZ_CAAR01001302.1	Protein Homology	CDS	23376	25247	.	-	0	ID=cds-STY7866_RS23075;Parent=gene-STY7866_RS23075;Note=internal stop;gbkey=CDS;gene=mrdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=STY7866_RS23075;product=penicillin-binding protein 2;pseudo=true;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	25436	27169	.	-	.	ID=gene-STY7866_RS23080;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=STY7866_RS23080
NZ_CAAR01001302.1	Protein Homology	CDS	25436	27169	.	-	0	ID=cds-WP_001025370.1;Parent=gene-STY7866_RS23080;Dbxref=Genbank:WP_001025370.1;Name=WP_001025370.1;gbkey=CDS;gene=argS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=STY7866_RS23080;product=arginine--tRNA ligase;protein_id=WP_001025370.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	gene	27406	27975	.	+	.	ID=gene-STY7866_RS23085;Name=STY7866_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS23085
NZ_CAAR01001302.1	Protein Homology	CDS	27406	27975	.	+	0	ID=cds-WP_000024793.1;Parent=gene-STY7866_RS23085;Dbxref=Genbank:WP_000024793.1;Name=WP_000024793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456475.1;locus_tag=STY7866_RS23085;product=VOC family protein;protein_id=WP_000024793.1;transl_table=11
NZ_CAAR01001302.1	RefSeq	pseudogene	27995	28416	.	+	.	ID=gene-STY7866_RS23090;Name=STY7866_RS23090;end_range=28416,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS23090;partial=true;pseudo=true
NZ_CAAR01001302.1	Protein Homology	CDS	27995	28416	.	+	0	ID=cds-STY7866_RS23090;Parent=gene-STY7866_RS23090;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=28416,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456474.1;locus_tag=STY7866_RS23090;partial=true;product=copper homeostasis protein CutC;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001301.1 1 1862
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001301.1	RefSeq	region	1	1862	.	+	.	ID=NZ_CAAR01001301.1:1..1862;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001301.1	RefSeq	pseudogene	1	228	.	+	.	ID=gene-STY7866_RS22925;Name=STY7866_RS22925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS22925;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001301.1	Protein Homology	CDS	1	228	.	+	0	ID=cds-STY7866_RS22925;Parent=gene-STY7866_RS22925;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455647.1;locus_tag=STY7866_RS22925;partial=true;product=secY/secA suppressor protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001301.1	RefSeq	gene	229	456	.	-	.	ID=gene-STY7866_RS22930;Name=STY7866_RS22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22930
NZ_CAAR01001301.1	Protein Homology	CDS	229	456	.	-	0	ID=cds-WP_001217832.1;Parent=gene-STY7866_RS22930;Dbxref=Genbank:WP_001217832.1;Name=WP_001217832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455646.1;locus_tag=STY7866_RS22930;product=YceK/YidQ family lipoprotein;protein_id=WP_001217832.1;transl_table=11
NZ_CAAR01001301.1	RefSeq	gene	530	1862	.	-	.	ID=gene-STY7866_RS22935;Name=mdoH;end_range=1862,.;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=STY7866_RS22935;partial=true
NZ_CAAR01001301.1	Protein Homology	CDS	530	1862	.	-	1	ID=cds-WP_000496391.1;Parent=gene-STY7866_RS22935;Dbxref=Genbank:WP_000496391.1;Name=WP_000496391.1;end_range=1862,.;gbkey=CDS;gene=mdoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455645.1;locus_tag=STY7866_RS22935;partial=true;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_000496391.1;transl_table=11
##sequence-region NZ_CAAR01001300.1 1 8196
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001300.1	RefSeq	region	1	8196	.	+	.	ID=NZ_CAAR01001300.1:1..8196;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001300.1	RefSeq	gene	1	166	.	+	.	ID=gene-STY7866_RS22875;Name=STY7866_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22875;partial=true;start_range=.,1
NZ_CAAR01001300.1	Protein Homology	CDS	1	166	.	+	1	ID=cds-WP_001766283.1;Parent=gene-STY7866_RS22875;Dbxref=Genbank:WP_001766283.1;Name=WP_001766283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458651.1;locus_tag=STY7866_RS22875;partial=true;product=TIGR03758 family integrating conjugative element protein;protein_id=WP_001766283.1;start_range=.,1;transl_table=11
NZ_CAAR01001300.1	RefSeq	gene	196	558	.	+	.	ID=gene-STY7866_RS22880;Name=STY7866_RS22880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22880
NZ_CAAR01001300.1	Protein Homology	CDS	196	558	.	+	0	ID=cds-WP_000949576.1;Parent=gene-STY7866_RS22880;Dbxref=Genbank:WP_000949576.1;Name=WP_000949576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458652.1;locus_tag=STY7866_RS22880;product=TIGR03745 family integrating conjugative element membrane protein;protein_id=WP_000949576.1;transl_table=11
NZ_CAAR01001300.1	RefSeq	gene	568	942	.	+	.	ID=gene-STY7866_RS22885;Name=STY7866_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22885
NZ_CAAR01001300.1	Protein Homology	CDS	568	942	.	+	0	ID=cds-WP_000848326.1;Parent=gene-STY7866_RS22885;Dbxref=Genbank:WP_000848326.1;Name=WP_000848326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000848326.1;locus_tag=STY7866_RS22885;product=TIGR03750 family conjugal transfer protein;protein_id=WP_000848326.1;transl_table=11
NZ_CAAR01001300.1	RefSeq	gene	939	1592	.	+	.	ID=gene-STY7866_RS22890;Name=STY7866_RS22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22890
NZ_CAAR01001300.1	Protein Homology	CDS	939	1592	.	+	0	ID=cds-WP_000086082.1;Parent=gene-STY7866_RS22890;Dbxref=Genbank:WP_000086082.1;Name=WP_000086082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458653.1;locus_tag=STY7866_RS22890;product=TIGR03746 family integrating conjugative element protein;protein_id=WP_000086082.1;transl_table=11
NZ_CAAR01001300.1	RefSeq	gene	1592	2491	.	+	.	ID=gene-STY7866_RS22895;Name=STY7866_RS22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22895
NZ_CAAR01001300.1	Protein Homology	CDS	1592	2491	.	+	0	ID=cds-WP_001240640.1;Parent=gene-STY7866_RS22895;Dbxref=Genbank:WP_001240640.1;Name=WP_001240640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458654.1;locus_tag=STY7866_RS22895;product=TIGR03749 family integrating conjugative element protein;protein_id=WP_001240640.1;transl_table=11
NZ_CAAR01001300.1	RefSeq	gene	2481	3959	.	+	.	ID=gene-STY7866_RS22900;Name=STY7866_RS22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22900
NZ_CAAR01001300.1	Protein Homology	CDS	2481	3959	.	+	0	ID=cds-WP_001165842.1;Parent=gene-STY7866_RS22900;Dbxref=Genbank:WP_001165842.1;Name=WP_001165842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458655.1;locus_tag=STY7866_RS22900;product=TIGR03752 family integrating conjugative element protein;protein_id=WP_001165842.1;transl_table=11
NZ_CAAR01001300.1	RefSeq	gene	3952	4395	.	+	.	ID=gene-STY7866_RS22905;Name=STY7866_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22905
NZ_CAAR01001300.1	Protein Homology	CDS	3952	4395	.	+	0	ID=cds-WP_010989290.1;Parent=gene-STY7866_RS22905;Dbxref=Genbank:WP_010989290.1;Name=WP_010989290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458656.1;locus_tag=STY7866_RS22905;product=TIGR03751 family conjugal transfer lipoprotein;protein_id=WP_010989290.1;transl_table=11
NZ_CAAR01001300.1	RefSeq	pseudogene	4395	7230	.	+	.	ID=gene-STY7866_RS22915;Name=STY7866_RS22915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS22915;pseudo=true
NZ_CAAR01001300.1	Protein Homology	CDS	4395	7230	.	+	0	ID=cds-STY7866_RS22915;Parent=gene-STY7866_RS22915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253395.1;locus_tag=STY7866_RS22915;product=conjugative transfer ATPase;pseudo=true;transl_table=11
NZ_CAAR01001300.1	RefSeq	gene	7385	7771	.	+	.	ID=gene-STY7866_RS22920;Name=STY7866_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22920
NZ_CAAR01001300.1	Protein Homology	CDS	7385	7771	.	+	0	ID=cds-WP_000054770.1;Parent=gene-STY7866_RS22920;Dbxref=Genbank:WP_000054770.1;Name=WP_000054770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458659.1;locus_tag=STY7866_RS22920;product=hypothetical protein;protein_id=WP_000054770.1;transl_table=11
NZ_CAAR01001300.1	RefSeq	pseudogene	8015	8196	.	+	.	ID=gene-STY7866_RS29495;Name=STY7866_RS29495;end_range=8196,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29495;partial=true;pseudo=true
NZ_CAAR01001300.1	Protein Homology	CDS	8015	8196	.	+	0	ID=cds-STY7866_RS29495;Parent=gene-STY7866_RS29495;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=8196,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458667.1;locus_tag=STY7866_RS29495;partial=true;product=phosphoadenosine phosphosulfate reductase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001299.1 1 180
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001299.1	RefSeq	region	1	180	.	+	.	ID=NZ_CAAR01001299.1:1..180;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001298.1 1 8025
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001298.1	RefSeq	region	1	8025	.	+	.	ID=NZ_CAAR01001298.1:1..8025;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001298.1	RefSeq	pseudogene	1	177	.	+	.	ID=gene-STY7866_RS22830;Name=galM;gbkey=Gene;gene=galM;gene_biotype=pseudogene;locus_tag=STY7866_RS22830;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001298.1	Protein Homology	CDS	1	177	.	+	0	ID=cds-STY7866_RS22830;Parent=gene-STY7866_RS22830;Note=mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=galM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455315.1;locus_tag=STY7866_RS22830;partial=true;product=galactose-1-epimerase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001298.1	RefSeq	gene	401	1153	.	+	.	ID=gene-STY7866_RS22835;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=STY7866_RS22835
NZ_CAAR01001298.1	Protein Homology	CDS	401	1153	.	+	0	ID=cds-WP_000301554.1;Parent=gene-STY7866_RS22835;Dbxref=Genbank:WP_000301554.1;Name=WP_000301554.1;gbkey=CDS;gene=gpmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=STY7866_RS22835;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_000301554.1;transl_table=11
NZ_CAAR01001298.1	RefSeq	gene	1244	2020	.	-	.	ID=gene-STY7866_RS22840;Name=STY7866_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22840
NZ_CAAR01001298.1	Protein Homology	CDS	1244	2020	.	-	0	ID=cds-WP_001253471.1;Parent=gene-STY7866_RS22840;Dbxref=Genbank:WP_001253471.1;Name=WP_001253471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455313.1;locus_tag=STY7866_RS22840;product=ABC transporter ATP-binding protein;protein_id=WP_001253471.1;transl_table=11
NZ_CAAR01001298.1	RefSeq	gene	2020	3099	.	-	.	ID=gene-STY7866_RS22845;Name=STY7866_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22845
NZ_CAAR01001298.1	Protein Homology	CDS	2020	3099	.	-	0	ID=cds-WP_000128344.1;Parent=gene-STY7866_RS22845;Dbxref=Genbank:WP_000128344.1;Name=WP_000128344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455312.1;locus_tag=STY7866_RS22845;product=iron ABC transporter permease;protein_id=WP_000128344.1;transl_table=11
NZ_CAAR01001298.1	RefSeq	gene	3252	4304	.	-	.	ID=gene-STY7866_RS22850;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=STY7866_RS22850
NZ_CAAR01001298.1	Protein Homology	CDS	3252	4304	.	-	0	ID=cds-WP_001109233.1;Parent=gene-STY7866_RS22850;Dbxref=Genbank:WP_001109233.1;Name=WP_001109233.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=STY7866_RS22850;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109233.1;transl_table=11
NZ_CAAR01001298.1	RefSeq	gene	4624	5010	.	+	.	ID=gene-STY7866_RS22855;Name=STY7866_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22855
NZ_CAAR01001298.1	Protein Homology	CDS	4624	5010	.	+	0	ID=cds-WP_000784380.1;Parent=gene-STY7866_RS22855;Dbxref=Genbank:WP_000784380.1;Name=WP_000784380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455310.1;locus_tag=STY7866_RS22855;product=hypothetical protein;protein_id=WP_000784380.1;transl_table=11
NZ_CAAR01001298.1	RefSeq	gene	5121	6059	.	+	.	ID=gene-STY7866_RS22860;Name=STY7866_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22860
NZ_CAAR01001298.1	Protein Homology	CDS	5121	6059	.	+	0	ID=cds-WP_000951257.1;Parent=gene-STY7866_RS22860;Dbxref=Genbank:WP_000951257.1;Name=WP_000951257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455309.1;locus_tag=STY7866_RS22860;product=CDF family zinc transporter ZitB;protein_id=WP_000951257.1;transl_table=11
NZ_CAAR01001298.1	RefSeq	pseudogene	6056	6791	.	-	.	ID=gene-STY7866_RS22865;Name=STY7866_RS22865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS22865;pseudo=true
NZ_CAAR01001298.1	Protein Homology	CDS	6056	6791	.	-	0	ID=cds-STY7866_RS22865;Parent=gene-STY7866_RS22865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000944232.1;locus_tag=STY7866_RS22865;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11
NZ_CAAR01001298.1	RefSeq	gene	6800	7843	.	-	.	ID=gene-STY7866_RS22870;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=STY7866_RS22870
NZ_CAAR01001298.1	Protein Homology	CDS	6800	7843	.	-	0	ID=cds-WP_000115354.1;Parent=gene-STY7866_RS22870;Dbxref=Genbank:WP_000115354.1;Name=WP_000115354.1;gbkey=CDS;gene=nadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=STY7866_RS22870;product=quinolinate synthase NadA;protein_id=WP_000115354.1;transl_table=11
##sequence-region NZ_CAAR01001297.1 1 12955
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001297.1	RefSeq	region	1	12955	.	+	.	ID=NZ_CAAR01001297.1:1..12955;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001297.1	RefSeq	pseudogene	1	612	.	+	.	ID=gene-STY7866_RS22775;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=pseudogene;locus_tag=STY7866_RS22775;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001297.1	Protein Homology	CDS	1	612	.	+	2	ID=cds-STY7866_RS22775;Parent=gene-STY7866_RS22775;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;gene=ruvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456462.1;locus_tag=STY7866_RS22775;partial=true;product=Holliday junction branch migration protein RuvA;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001297.1	RefSeq	gene	621	1631	.	+	.	ID=gene-STY7866_RS22780;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=STY7866_RS22780
NZ_CAAR01001297.1	Protein Homology	CDS	621	1631	.	+	0	ID=cds-WP_000568508.1;Parent=gene-STY7866_RS22780;Dbxref=Genbank:WP_000568508.1;Name=WP_000568508.1;gbkey=CDS;gene=ruvB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441950.1;locus_tag=STY7866_RS22780;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568508.1;transl_table=11
NZ_CAAR01001297.1	RefSeq	gene	1710	2495	.	-	.	ID=gene-STY7866_RS22785;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=STY7866_RS22785
NZ_CAAR01001297.1	Protein Homology	CDS	1710	2495	.	-	0	ID=cds-WP_000571518.1;Parent=gene-STY7866_RS22785;Dbxref=Genbank:WP_000571518.1;Name=WP_000571518.1;gbkey=CDS;gene=znuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456460.1;locus_tag=STY7866_RS22785;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571518.1;transl_table=11
NZ_CAAR01001297.1	RefSeq	gene	2492	3247	.	-	.	ID=gene-STY7866_RS22790;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=STY7866_RS22790
NZ_CAAR01001297.1	Protein Homology	CDS	2492	3247	.	-	0	ID=cds-WP_000203015.1;Parent=gene-STY7866_RS22790;Dbxref=Genbank:WP_000203015.1;Name=WP_000203015.1;gbkey=CDS;gene=znuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456459.1;locus_tag=STY7866_RS22790;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000203015.1;transl_table=11
NZ_CAAR01001297.1	RefSeq	gene	3326	4270	.	+	.	ID=gene-STY7866_RS22795;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=STY7866_RS22795
NZ_CAAR01001297.1	Protein Homology	CDS	3326	4270	.	+	0	ID=cds-WP_000939597.1;Parent=gene-STY7866_RS22795;Dbxref=Genbank:WP_000939597.1;Name=WP_000939597.1;gbkey=CDS;gene=znuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=STY7866_RS22795;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_000939597.1;transl_table=11
NZ_CAAR01001297.1	RefSeq	pseudogene	4286	5605	.	+	.	ID=gene-STY7866_RS22800;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=pseudogene;locus_tag=STY7866_RS22800;pseudo=true
NZ_CAAR01001297.1	Protein Homology	CDS	4286	5605	.	+	0	ID=cds-STY7866_RS22800;Parent=gene-STY7866_RS22800;Note=frameshifted;gbkey=CDS;gene=mepM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456457.1;locus_tag=STY7866_RS22800;product=murein DD-endopeptidase MepM;pseudo=true;transl_table=11
NZ_CAAR01001297.1	RefSeq	gene	5722	6693	.	+	.	ID=gene-STY7866_RS22805;Name=msbB;gbkey=Gene;gene=msbB;gene_biotype=protein_coding;locus_tag=STY7866_RS22805
NZ_CAAR01001297.1	Protein Homology	CDS	5722	6693	.	+	0	ID=cds-WP_000448401.1;Parent=gene-STY7866_RS22805;Dbxref=Genbank:WP_000448401.1;Name=WP_000448401.1;gbkey=CDS;gene=msbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456456.1;locus_tag=STY7866_RS22805;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448401.1;transl_table=11
NZ_CAAR01001297.1	RefSeq	gene	6766	8208	.	-	.	ID=gene-STY7866_RS22810;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=STY7866_RS22810
NZ_CAAR01001297.1	Protein Homology	CDS	6766	8208	.	-	0	ID=cds-WP_000091158.1;Parent=gene-STY7866_RS22810;Dbxref=Genbank:WP_000091158.1;Name=WP_000091158.1;gbkey=CDS;gene=pyk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=STY7866_RS22810;product=pyruvate kinase;protein_id=WP_000091158.1;transl_table=11
NZ_CAAR01001297.1	RefSeq	pseudogene	8332	9203	.	-	.	ID=gene-STY7866_RS22815;Name=STY7866_RS22815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS22815;pseudo=true
NZ_CAAR01001297.1	Protein Homology	CDS	8332	9203	.	-	0	ID=cds-STY7866_RS22815;Parent=gene-STY7866_RS22815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456454.1;locus_tag=STY7866_RS22815;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11
NZ_CAAR01001297.1	RefSeq	gene	9545	11020	.	+	.	ID=gene-STY7866_RS22820;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=STY7866_RS22820
NZ_CAAR01001297.1	Protein Homology	CDS	9545	11020	.	+	0	ID=cds-WP_000301712.1;Parent=gene-STY7866_RS22820;Dbxref=Genbank:WP_000301712.1;Name=WP_000301712.1;gbkey=CDS;gene=zwf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=STY7866_RS22820;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301712.1;transl_table=11
NZ_CAAR01001297.1	RefSeq	gene	11255	12955	.	+	.	ID=gene-STY7866_RS22825;Name=edd;end_range=12955,.;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=STY7866_RS22825;partial=true
NZ_CAAR01001297.1	Protein Homology	CDS	11255	12955	.	+	0	ID=cds-WP_001069122.1;Parent=gene-STY7866_RS22825;Dbxref=Genbank:WP_001069122.1;Name=WP_001069122.1;end_range=12955,.;gbkey=CDS;gene=edd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020244583.1;locus_tag=STY7866_RS22825;partial=true;product=phosphogluconate dehydratase;protein_id=WP_001069122.1;transl_table=11
##sequence-region NZ_CAAR01001296.1 1 17340
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001296.1	RefSeq	region	1	17340	.	+	.	ID=NZ_CAAR01001296.1:1..17340;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001296.1	RefSeq	pseudogene	287	2104	.	+	.	ID=gene-STY7866_RS22670;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=pseudogene;locus_tag=STY7866_RS22670;pseudo=true
NZ_CAAR01001296.1	Protein Homology	CDS	287	2104	.	+	0	ID=cds-STY7866_RS22670;Parent=gene-STY7866_RS22670;Note=frameshifted;gbkey=CDS;gene=malZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454996.1;locus_tag=STY7866_RS22670;product=maltodextrin glucosidase;pseudo=true;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	2176	2778	.	-	.	ID=gene-STY7866_RS22675;Name=STY7866_RS22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22675
NZ_CAAR01001296.1	Protein Homology	CDS	2176	2778	.	-	0	ID=cds-WP_000244731.1;Parent=gene-STY7866_RS22675;Dbxref=Genbank:WP_000244731.1;Name=WP_000244731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818745.1;locus_tag=STY7866_RS22675;product=peroxiredoxin;protein_id=WP_000244731.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	2988	3566	.	-	.	ID=gene-STY7866_RS22680;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=STY7866_RS22680
NZ_CAAR01001296.1	Protein Homology	CDS	2988	3566	.	-	0	ID=cds-WP_031626539.1;Parent=gene-STY7866_RS22680;Dbxref=Genbank:WP_031626539.1;Name=WP_031626539.1;gbkey=CDS;gene=acpH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454998.1;locus_tag=STY7866_RS22680;product=ACP phosphodiesterase;protein_id=WP_031626539.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	3664	4728	.	+	.	ID=gene-STY7866_RS22690;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=STY7866_RS22690
NZ_CAAR01001296.1	Protein Homology	CDS	3664	4728	.	+	0	ID=cds-WP_001266528.1;Parent=gene-STY7866_RS22690;Dbxref=Genbank:WP_001266528.1;Name=WP_001266528.1;gbkey=CDS;gene=queA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454999.1;locus_tag=STY7866_RS22690;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266528.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	4925	6052	.	+	.	ID=gene-STY7866_RS22695;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=STY7866_RS22695
NZ_CAAR01001296.1	Protein Homology	CDS	4925	6052	.	+	0	ID=cds-WP_000667304.1;Parent=gene-STY7866_RS22695;Dbxref=Genbank:WP_000667304.1;Name=WP_000667304.1;gbkey=CDS;gene=tgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=STY7866_RS22695;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667304.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	6075	6407	.	+	.	ID=gene-STY7866_RS22700;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=STY7866_RS22700
NZ_CAAR01001296.1	Protein Homology	CDS	6075	6407	.	+	0	ID=cds-WP_000007628.1;Parent=gene-STY7866_RS22700;Dbxref=Genbank:WP_000007628.1;Name=WP_000007628.1;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=STY7866_RS22700;product=preprotein translocase subunit YajC;protein_id=WP_000007628.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	6435	8282	.	+	.	ID=gene-STY7866_RS22705;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=STY7866_RS22705
NZ_CAAR01001296.1	Protein Homology	CDS	6435	8282	.	+	0	ID=cds-WP_000934811.1;Parent=gene-STY7866_RS22705;Dbxref=Genbank:WP_000934811.1;Name=WP_000934811.1;gbkey=CDS;gene=secD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=STY7866_RS22705;product=protein translocase subunit SecD;protein_id=WP_000934811.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	8293	9264	.	+	.	ID=gene-STY7866_RS22710;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=STY7866_RS22710
NZ_CAAR01001296.1	Protein Homology	CDS	8293	9264	.	+	0	ID=cds-WP_000046629.1;Parent=gene-STY7866_RS22710;Dbxref=Genbank:WP_000046629.1;Name=WP_000046629.1;gbkey=CDS;gene=secF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455003.1;locus_tag=STY7866_RS22710;product=protein translocase subunit SecF;protein_id=WP_000046629.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	9411	9776	.	+	.	ID=gene-STY7866_RS22715;Name=STY7866_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22715
NZ_CAAR01001296.1	Protein Homology	CDS	9411	9776	.	+	0	ID=cds-WP_000793035.1;Parent=gene-STY7866_RS22715;Dbxref=Genbank:WP_000793035.1;Name=WP_000793035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455004.1;locus_tag=STY7866_RS22715;product=VOC family protein;protein_id=WP_000793035.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	9802	10494	.	+	.	ID=gene-STY7866_RS22720;Name=STY7866_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22720
NZ_CAAR01001296.1	Protein Homology	CDS	9802	10494	.	+	0	ID=cds-WP_000198318.1;Parent=gene-STY7866_RS22720;Dbxref=Genbank:WP_000198318.1;Name=WP_000198318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455005.1;locus_tag=STY7866_RS22720;product=YafY family transcriptional regulator;protein_id=WP_000198318.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	10664	11011	.	+	.	ID=gene-STY7866_RS22725;Name=STY7866_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22725
NZ_CAAR01001296.1	Protein Homology	CDS	10664	11011	.	+	0	ID=cds-WP_000974818.1;Parent=gene-STY7866_RS22725;Dbxref=Genbank:WP_000974818.1;Name=WP_000974818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455006.1;locus_tag=STY7866_RS22725;product=HNH nuclease family protein;protein_id=WP_000974818.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	11082	11261	.	+	.	ID=gene-STY7866_RS29480;Name=STY7866_RS29480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29480
NZ_CAAR01001296.1	Protein Homology	CDS	11082	11261	.	+	0	ID=cds-WP_086011948.1;Parent=gene-STY7866_RS29480;Dbxref=Genbank:WP_086011948.1;Name=WP_086011948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014343964.1;locus_tag=STY7866_RS29480;product=hypothetical protein;protein_id=WP_086011948.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	pseudogene	11286	11413	.	-	.	ID=gene-STY7866_RS29485;Name=STY7866_RS29485;end_range=11413,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29485;partial=true;pseudo=true;start_range=.,11286
NZ_CAAR01001296.1	Protein Homology	CDS	11286	11413	.	-	0	ID=cds-STY7866_RS29485;Parent=gene-STY7866_RS29485;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=11413,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001178358.1;locus_tag=STY7866_RS29485;partial=true;product=integrase;pseudo=true;start_range=.,11286;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	11454	11561	.	+	.	ID=gene-STY7866_RS22730;Name=STY7866_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22730
NZ_CAAR01001296.1	Protein Homology	CDS	11454	11561	.	+	0	ID=cds-WP_000176312.1;Parent=gene-STY7866_RS22730;Dbxref=Genbank:WP_000176312.1;Name=WP_000176312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=STY7866_RS22730;product=hypothetical protein;protein_id=WP_000176312.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	11644	12507	.	-	.	ID=gene-STY7866_RS22735;Name=STY7866_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22735
NZ_CAAR01001296.1	Protein Homology	CDS	11644	12507	.	-	0	ID=cds-WP_000752021.1;Parent=gene-STY7866_RS22735;Dbxref=Genbank:WP_000752021.1;Name=WP_000752021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455008.1;locus_tag=STY7866_RS22735;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_000752021.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	12807	13346	.	-	.	ID=gene-STY7866_RS22740;Name=STY7866_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22740
NZ_CAAR01001296.1	Protein Homology	CDS	12807	13346	.	-	0	ID=cds-WP_000198480.1;Parent=gene-STY7866_RS22740;Dbxref=Genbank:WP_000198480.1;Name=WP_000198480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455009.1;locus_tag=STY7866_RS22740;product=DUF3251 domain-containing protein;protein_id=WP_000198480.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	13498	13947	.	+	.	ID=gene-STY7866_RS22745;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=STY7866_RS22745
NZ_CAAR01001296.1	Protein Homology	CDS	13498	13947	.	+	0	ID=cds-WP_000543533.1;Parent=gene-STY7866_RS22745;Dbxref=Genbank:WP_000543533.1;Name=WP_000543533.1;gbkey=CDS;gene=nrdR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=STY7866_RS22745;product=transcriptional regulator NrdR;protein_id=WP_000543533.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	13951	15054	.	+	.	ID=gene-STY7866_RS22750;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=STY7866_RS22750
NZ_CAAR01001296.1	Protein Homology	CDS	13951	15054	.	+	0	ID=cds-WP_001150220.1;Parent=gene-STY7866_RS22750;Dbxref=Genbank:WP_001150220.1;Name=WP_001150220.1;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455010.1;locus_tag=STY7866_RS22750;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150220.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	15143	15613	.	+	.	ID=gene-STY7866_RS22755;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=STY7866_RS22755
NZ_CAAR01001296.1	Protein Homology	CDS	15143	15613	.	+	0	ID=cds-WP_001021372.1;Parent=gene-STY7866_RS22755;Dbxref=Genbank:WP_001021372.1;Name=WP_001021372.1;gbkey=CDS;gene=ribE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455011.1;locus_tag=STY7866_RS22755;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021372.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	15634	16053	.	+	.	ID=gene-STY7866_RS22760;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=STY7866_RS22760
NZ_CAAR01001296.1	Protein Homology	CDS	15634	16053	.	+	0	ID=cds-WP_000801120.1;Parent=gene-STY7866_RS22760;Dbxref=Genbank:WP_000801120.1;Name=WP_000801120.1;gbkey=CDS;gene=nusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455012.1;locus_tag=STY7866_RS22760;product=transcription antitermination factor NusB;protein_id=WP_000801120.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	gene	16132	17109	.	+	.	ID=gene-STY7866_RS22765;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=STY7866_RS22765
NZ_CAAR01001296.1	Protein Homology	CDS	16132	17109	.	+	0	ID=cds-WP_000752139.1;Parent=gene-STY7866_RS22765;Dbxref=Genbank:WP_000752139.1;Name=WP_000752139.1;gbkey=CDS;gene=thiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455013.1;locus_tag=STY7866_RS22765;product=thiamine-phosphate kinase;protein_id=WP_000752139.1;transl_table=11
NZ_CAAR01001296.1	RefSeq	pseudogene	17087	17340	.	+	.	ID=gene-STY7866_RS22770;Name=STY7866_RS22770;end_range=17340,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS22770;partial=true;pseudo=true
NZ_CAAR01001296.1	Protein Homology	CDS	17087	17340	.	+	0	ID=cds-STY7866_RS22770;Parent=gene-STY7866_RS22770;Note=hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=17340,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455014.1;locus_tag=STY7866_RS22770;partial=true;product=phosphatidylglycerophosphatase A;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001295.1 1 8667
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001295.1	RefSeq	region	1	8667	.	+	.	ID=NZ_CAAR01001295.1:1..8667;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001295.1	RefSeq	pseudogene	198	507	.	-	.	ID=gene-STY7866_RS29475;Name=STY7866_RS29475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29475;pseudo=true
NZ_CAAR01001295.1	Protein Homology	CDS	198	507	.	-	0	ID=cds-STY7866_RS29475;Parent=gene-STY7866_RS29475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=STY7866_RS29475;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01001295.1	RefSeq	gene	774	1490	.	-	.	ID=gene-STY7866_RS22625;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=STY7866_RS22625
NZ_CAAR01001295.1	Protein Homology	CDS	774	1490	.	-	0	ID=cds-WP_001194359.1;Parent=gene-STY7866_RS22625;Dbxref=Genbank:WP_001194359.1;Name=WP_001194359.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856501.1;locus_tag=STY7866_RS22625;product=two-component system response regulator ArcA;protein_id=WP_001194359.1;transl_table=11
NZ_CAAR01001295.1	RefSeq	gene	1586	1726	.	+	.	ID=gene-STY7866_RS22630;Name=STY7866_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22630
NZ_CAAR01001295.1	Protein Homology	CDS	1586	1726	.	+	0	ID=cds-WP_001541509.1;Parent=gene-STY7866_RS22630;Dbxref=Genbank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459004.1;locus_tag=STY7866_RS22630;product=hypothetical protein;protein_id=WP_001541509.1;transl_table=11
NZ_CAAR01001295.1	RefSeq	gene	2126	2812	.	+	.	ID=gene-STY7866_RS22635;Name=STY7866_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22635
NZ_CAAR01001295.1	Protein Homology	CDS	2126	2812	.	+	0	ID=cds-WP_001266768.1;Parent=gene-STY7866_RS22635;Dbxref=Genbank:WP_001266768.1;Name=WP_001266768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459005.1;locus_tag=STY7866_RS22635;product=tRNA/rRNA methyltransferase;protein_id=WP_001266768.1;transl_table=11
NZ_CAAR01001295.1	RefSeq	gene	3026	3091	.	+	.	ID=gene-STY7866_RS22640;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=STY7866_RS22640
NZ_CAAR01001295.1	Protein Homology	CDS	3026	3091	.	+	0	ID=cds-WP_001575544.1;Parent=gene-STY7866_RS22640;Dbxref=Genbank:WP_001575544.1;Name=WP_001575544.1;gbkey=CDS;gene=thrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454611.1;locus_tag=STY7866_RS22640;product=thr operon leader peptide;protein_id=WP_001575544.1;transl_table=11
NZ_CAAR01001295.1	RefSeq	gene	3173	5635	.	+	.	ID=gene-STY7866_RS22645;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=STY7866_RS22645
NZ_CAAR01001295.1	Protein Homology	CDS	3173	5635	.	+	0	ID=cds-WP_001264731.1;Parent=gene-STY7866_RS22645;Dbxref=Genbank:WP_001264731.1;Name=WP_001264731.1;gbkey=CDS;gene=thrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=STY7866_RS22645;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264731.1;transl_table=11
NZ_CAAR01001295.1	RefSeq	gene	5637	6566	.	+	.	ID=gene-STY7866_RS22650;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=STY7866_RS22650
NZ_CAAR01001295.1	Protein Homology	CDS	5637	6566	.	+	0	ID=cds-WP_000241685.1;Parent=gene-STY7866_RS22650;Dbxref=Genbank:WP_000241685.1;Name=WP_000241685.1;gbkey=CDS;gene=thrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454613.1;locus_tag=STY7866_RS22650;product=homoserine kinase;protein_id=WP_000241685.1;transl_table=11
NZ_CAAR01001295.1	RefSeq	gene	6570	7856	.	+	.	ID=gene-STY7866_RS22655;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=STY7866_RS22655
NZ_CAAR01001295.1	Protein Homology	CDS	6570	7856	.	+	0	ID=cds-WP_000781103.1;Parent=gene-STY7866_RS22655;Dbxref=Genbank:WP_000781103.1;Name=WP_000781103.1;gbkey=CDS;gene=thrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454614.1;locus_tag=STY7866_RS22655;product=threonine synthase;protein_id=WP_000781103.1;transl_table=11
NZ_CAAR01001295.1	RefSeq	gene	7950	8667	.	-	.	ID=gene-STY7866_RS22660;Name=yaaA;end_range=8667,.;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=STY7866_RS22660;partial=true
NZ_CAAR01001295.1	Protein Homology	CDS	7950	8667	.	-	1	ID=cds-WP_000319038.1;Parent=gene-STY7866_RS22660;Dbxref=Genbank:WP_000319038.1;Name=WP_000319038.1;end_range=8667,.;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454615.1;locus_tag=STY7866_RS22660;partial=true;product=peroxide stress protein YaaA;protein_id=WP_000319038.1;transl_table=11
##sequence-region NZ_CAAR01001294.1 1 3391
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001294.1	RefSeq	region	1	3391	.	+	.	ID=NZ_CAAR01001294.1:1..3391;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001294.1	RefSeq	gene	180	1235	.	+	.	ID=gene-STY7866_RS22605;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=STY7866_RS22605
NZ_CAAR01001294.1	Protein Homology	CDS	180	1235	.	+	0	ID=cds-WP_000703939.1;Parent=gene-STY7866_RS22605;Dbxref=Genbank:WP_000703939.1;Name=WP_000703939.1;gbkey=CDS;gene=allD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715231.1;locus_tag=STY7866_RS22605;product=ureidoglycolate dehydrogenase;protein_id=WP_000703939.1;transl_table=11
NZ_CAAR01001294.1	RefSeq	gene	1250	2485	.	+	.	ID=gene-STY7866_RS22610;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=STY7866_RS22610
NZ_CAAR01001294.1	Protein Homology	CDS	1250	2485	.	+	0	ID=cds-WP_000589772.1;Parent=gene-STY7866_RS22610;Dbxref=Genbank:WP_000589772.1;Name=WP_000589772.1;gbkey=CDS;gene=allC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455119.1;locus_tag=STY7866_RS22610;product=allantoate deiminase;protein_id=WP_000589772.1;transl_table=11
NZ_CAAR01001294.1	RefSeq	gene	2496	3281	.	+	.	ID=gene-STY7866_RS22615;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=STY7866_RS22615
NZ_CAAR01001294.1	Protein Homology	CDS	2496	3281	.	+	0	ID=cds-WP_000540981.1;Parent=gene-STY7866_RS22615;Dbxref=Genbank:WP_000540981.1;Name=WP_000540981.1;gbkey=CDS;gene=allE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455118.1;locus_tag=STY7866_RS22615;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540981.1;transl_table=11
##sequence-region NZ_CAAR01001293.1 1 30687
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001293.1	RefSeq	region	1	30687	.	+	.	ID=NZ_CAAR01001293.1:1..30687;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001293.1	RefSeq	gene	1	242	.	-	.	ID=gene-STY7866_RS29460;Name=STY7866_RS29460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29460;partial=true;start_range=.,1
NZ_CAAR01001293.1	Protein Homology	CDS	1	242	.	-	0	ID=cds-WP_139644107.1;Parent=gene-STY7866_RS29460;Dbxref=Genbank:WP_139644107.1;Name=WP_139644107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455279.1;locus_tag=STY7866_RS29460;partial=true;product=glycosyltransferase;protein_id=WP_139644107.1;start_range=.,1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	325	1392	.	-	.	ID=gene-STY7866_RS22455;Name=STY7866_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22455
NZ_CAAR01001293.1	Protein Homology	CDS	325	1392	.	-	0	ID=cds-WP_001766264.1;Parent=gene-STY7866_RS22455;Dbxref=Genbank:WP_001766264.1;Name=WP_001766264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001779972.1;locus_tag=STY7866_RS22455;product=UDP-galactopyranose mutase;protein_id=WP_001766264.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	1678	2418	.	-	.	ID=gene-STY7866_RS22460;Name=STY7866_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22460
NZ_CAAR01001293.1	Protein Homology	CDS	1678	2418	.	-	0	ID=cds-WP_001194239.1;Parent=gene-STY7866_RS22460;Dbxref=Genbank:WP_001194239.1;Name=WP_001194239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455277.1;locus_tag=STY7866_RS22460;product=hypothetical protein;protein_id=WP_001194239.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	2420	2755	.	-	.	ID=gene-STY7866_RS22465;Name=STY7866_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22465
NZ_CAAR01001293.1	Protein Homology	CDS	2420	2755	.	-	0	ID=cds-WP_010989127.1;Parent=gene-STY7866_RS22465;Dbxref=Genbank:WP_010989127.1;Name=WP_010989127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459702.1;locus_tag=STY7866_RS22465;product=hypothetical protein;protein_id=WP_010989127.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	2933	3499	.	-	.	ID=gene-STY7866_RS22470;Name=STY7866_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22470
NZ_CAAR01001293.1	Protein Homology	CDS	2933	3499	.	-	0	ID=cds-WP_000824704.1;Parent=gene-STY7866_RS22470;Dbxref=Genbank:WP_000824704.1;Name=WP_000824704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455275.1;locus_tag=STY7866_RS22470;product=tyrosine-type recombinase/integrase;protein_id=WP_000824704.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	3559	3690	.	-	.	ID=gene-STY7866_RS22475;Name=STY7866_RS22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22475
NZ_CAAR01001293.1	Protein Homology	CDS	3559	3690	.	-	0	ID=cds-WP_001521652.1;Parent=gene-STY7866_RS22475;Dbxref=Genbank:WP_001521652.1;Name=WP_001521652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459700.1;locus_tag=STY7866_RS22475;product=hypothetical protein;protein_id=WP_001521652.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	3794	4057	.	+	.	ID=gene-STY7866_RS29465;Name=STY7866_RS29465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29465
NZ_CAAR01001293.1	Protein Homology	CDS	3794	4057	.	+	0	ID=cds-WP_024151120.1;Parent=gene-STY7866_RS29465;Dbxref=Genbank:WP_024151120.1;Name=WP_024151120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000951980.1;locus_tag=STY7866_RS29465;product=hypothetical protein;protein_id=WP_024151120.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	4013	4747	.	-	.	ID=gene-STY7866_RS22480;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=STY7866_RS22480
NZ_CAAR01001293.1	Protein Homology	CDS	4013	4747	.	-	0	ID=cds-WP_001017910.1;Parent=gene-STY7866_RS22480;Dbxref=Genbank:WP_001017910.1;Name=WP_001017910.1;gbkey=CDS;gene=pxpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455273.1;locus_tag=STY7866_RS22480;product=5-oxoprolinase subunit PxpA;protein_id=WP_001017910.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	4737	5669	.	-	.	ID=gene-STY7866_RS22485;Name=STY7866_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22485
NZ_CAAR01001293.1	Protein Homology	CDS	4737	5669	.	-	0	ID=cds-WP_000932048.1;Parent=gene-STY7866_RS22485;Dbxref=Genbank:WP_000932048.1;Name=WP_000932048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455272.1;locus_tag=STY7866_RS22485;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_000932048.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	5663	6319	.	-	.	ID=gene-STY7866_RS22490;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=STY7866_RS22490
NZ_CAAR01001293.1	Protein Homology	CDS	5663	6319	.	-	0	ID=cds-WP_001188373.1;Parent=gene-STY7866_RS22490;Dbxref=Genbank:WP_001188373.1;Name=WP_001188373.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=STY7866_RS22490;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188373.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	6335	7078	.	-	.	ID=gene-STY7866_RS22495;Name=STY7866_RS22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22495
NZ_CAAR01001293.1	Protein Homology	CDS	6335	7078	.	-	0	ID=cds-WP_000798844.1;Parent=gene-STY7866_RS22495;Dbxref=Genbank:WP_000798844.1;Name=WP_000798844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=STY7866_RS22495;product=radiation resistance protein YbgI;protein_id=WP_000798844.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	7407	8888	.	+	.	ID=gene-STY7866_RS22500;Name=STY7866_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22500
NZ_CAAR01001293.1	Protein Homology	CDS	7407	8888	.	+	0	ID=cds-WP_001041123.1;Parent=gene-STY7866_RS22500;Dbxref=Genbank:WP_001041123.1;Name=WP_001041123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455269.1;locus_tag=STY7866_RS22500;product=MFS transporter;protein_id=WP_001041123.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	8927	10348	.	-	.	ID=gene-STY7866_RS22505;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=STY7866_RS22505
NZ_CAAR01001293.1	Protein Homology	CDS	8927	10348	.	-	0	ID=cds-WP_001142014.1;Parent=gene-STY7866_RS22505;Dbxref=Genbank:WP_001142014.1;Name=WP_001142014.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455268.1;locus_tag=STY7866_RS22505;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_001142014.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	10459	10665	.	-	.	ID=gene-STY7866_RS22510;Name=STY7866_RS22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22510
NZ_CAAR01001293.1	Protein Homology	CDS	10459	10665	.	-	0	ID=cds-WP_000401435.1;Parent=gene-STY7866_RS22510;Dbxref=Genbank:WP_000401435.1;Name=WP_000401435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455267.1;locus_tag=STY7866_RS22510;product=YbfA family protein;protein_id=WP_000401435.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	11002	11091	.	+	.	ID=gene-STY7866_RS22515;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=STY7866_RS22515
NZ_CAAR01001293.1	Protein Homology	CDS	11002	11091	.	+	0	ID=cds-WP_001670793.1;Parent=gene-STY7866_RS22515;Dbxref=Genbank:WP_001670793.1;Name=WP_001670793.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=STY7866_RS22515;product=K(+)-transporting ATPase subunit F;protein_id=WP_001670793.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	11091	12770	.	+	.	ID=gene-STY7866_RS22520;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=STY7866_RS22520
NZ_CAAR01001293.1	Protein Homology	CDS	11091	12770	.	+	0	ID=cds-WP_000730077.1;Parent=gene-STY7866_RS22520;Dbxref=Genbank:WP_000730077.1;Name=WP_000730077.1;gbkey=CDS;gene=kdpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455266.1;locus_tag=STY7866_RS22520;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000730077.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	pseudogene	12791	14501	.	+	.	ID=gene-STY7866_RS22525;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=pseudogene;locus_tag=STY7866_RS22525;pseudo=true
NZ_CAAR01001293.1	Protein Homology	CDS	12791	14501	.	+	0	ID=cds-STY7866_RS22525;Parent=gene-STY7866_RS22525;Note=frameshifted;gbkey=CDS;gene=kdpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455265.1;locus_tag=STY7866_RS22525;product=potassium-transporting ATPase subunit KdpB;pseudo=true;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	14510	15094	.	+	.	ID=gene-STY7866_RS22530;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=STY7866_RS22530
NZ_CAAR01001293.1	Protein Homology	CDS	14510	15094	.	+	0	ID=cds-WP_014341418.1;Parent=gene-STY7866_RS22530;Dbxref=Genbank:WP_014341418.1;Name=WP_014341418.1;gbkey=CDS;gene=kdpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=STY7866_RS22530;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_014341418.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	15091	17775	.	+	.	ID=gene-STY7866_RS22535;Name=kdbD;gbkey=Gene;gene=kdbD;gene_biotype=protein_coding;locus_tag=STY7866_RS22535
NZ_CAAR01001293.1	Protein Homology	CDS	15091	17775	.	+	0	ID=cds-WP_000997483.1;Parent=gene-STY7866_RS22535;Dbxref=Genbank:WP_000997483.1;Name=WP_000997483.1;gbkey=CDS;gene=kdbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455263.1;locus_tag=STY7866_RS22535;product=two-component system sensor histidine kinase KdbD;protein_id=WP_000997483.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	17772	18449	.	+	.	ID=gene-STY7866_RS22540;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=STY7866_RS22540
NZ_CAAR01001293.1	Protein Homology	CDS	17772	18449	.	+	0	ID=cds-WP_000186051.1;Parent=gene-STY7866_RS22540;Dbxref=Genbank:WP_000186051.1;Name=WP_000186051.1;gbkey=CDS;gene=kdpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455262.1;locus_tag=STY7866_RS22540;product=two-component system response regulator KdpE;protein_id=WP_000186051.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	pseudogene	18727	18828	.	+	.	ID=gene-STY7866_RS29470;Name=STY7866_RS29470;end_range=18828,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29470;partial=true;pseudo=true
NZ_CAAR01001293.1	Protein Homology	CDS	18727	18828	.	+	0	ID=cds-STY7866_RS29470;Parent=gene-STY7866_RS29470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=18828,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001312672.1;locus_tag=STY7866_RS29470;partial=true;product=DUF2618 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01001293.1	RefSeq	pseudogene	19211	21281	.	+	.	ID=gene-STY7866_RS22550;Name=STY7866_RS22550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS22550;pseudo=true
NZ_CAAR01001293.1	Protein Homology	CDS	19211	21281	.	+	0	ID=cds-STY7866_RS22550;Parent=gene-STY7866_RS22550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=STY7866_RS22550;product=ornithine decarboxylase;pseudo=true;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	21278	22597	.	+	.	ID=gene-STY7866_RS22555;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=STY7866_RS22555
NZ_CAAR01001293.1	Protein Homology	CDS	21278	22597	.	+	0	ID=cds-WP_000042658.1;Parent=gene-STY7866_RS22555;Dbxref=Genbank:WP_000042658.1;Name=WP_000042658.1;gbkey=CDS;gene=potE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=STY7866_RS22555;product=putrescine-ornithine antiporter;protein_id=WP_000042658.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	22662	23147	.	+	.	ID=gene-STY7866_RS22560;Name=STY7866_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22560
NZ_CAAR01001293.1	Protein Homology	CDS	22662	23147	.	+	0	ID=cds-WP_000070053.1;Parent=gene-STY7866_RS22560;Dbxref=Genbank:WP_000070053.1;Name=WP_000070053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455260.1;locus_tag=STY7866_RS22560;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_000070053.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	23262	24902	.	-	.	ID=gene-STY7866_RS22565;Name=STY7866_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22565
NZ_CAAR01001293.1	Protein Homology	CDS	23262	24902	.	-	0	ID=cds-WP_000974378.1;Parent=gene-STY7866_RS22565;Dbxref=Genbank:WP_000974378.1;Name=WP_000974378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455259.1;locus_tag=STY7866_RS22565;product=alpha-D-glucose phosphate-specific phosphoglucomutase;protein_id=WP_000974378.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	24927	25469	.	-	.	ID=gene-STY7866_RS22570;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=STY7866_RS22570
NZ_CAAR01001293.1	Protein Homology	CDS	24927	25469	.	-	0	ID=cds-WP_000848395.1;Parent=gene-STY7866_RS22570;Dbxref=Genbank:WP_000848395.1;Name=WP_000848395.1;gbkey=CDS;gene=seqA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455258.1;locus_tag=STY7866_RS22570;product=replication initiation negative regulator SeqA;protein_id=WP_000848395.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	25654	26424	.	+	.	ID=gene-STY7866_RS22575;Name=STY7866_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22575
NZ_CAAR01001293.1	Protein Homology	CDS	25654	26424	.	+	0	ID=cds-WP_000773252.1;Parent=gene-STY7866_RS22575;Dbxref=Genbank:WP_000773252.1;Name=WP_000773252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455257.1;locus_tag=STY7866_RS22575;product=esterase;protein_id=WP_000773252.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	26558	26851	.	+	.	ID=gene-STY7866_RS22580;Name=STY7866_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22580
NZ_CAAR01001293.1	Protein Homology	CDS	26558	26851	.	+	0	ID=cds-WP_001040939.1;Parent=gene-STY7866_RS22580;Dbxref=Genbank:WP_001040939.1;Name=WP_001040939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455256.1;locus_tag=STY7866_RS22580;product=LexA regulated protein;protein_id=WP_001040939.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	27002	27532	.	+	.	ID=gene-STY7866_RS22585;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=STY7866_RS22585
NZ_CAAR01001293.1	Protein Homology	CDS	27002	27532	.	+	0	ID=cds-WP_001018622.1;Parent=gene-STY7866_RS22585;Dbxref=Genbank:WP_001018622.1;Name=WP_001018622.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455255.1;locus_tag=STY7866_RS22585;product=flavodoxin FldA;protein_id=WP_001018622.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	27814	28266	.	+	.	ID=gene-STY7866_RS22590;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=STY7866_RS22590
NZ_CAAR01001293.1	Protein Homology	CDS	27814	28266	.	+	0	ID=cds-WP_000131699.1;Parent=gene-STY7866_RS22590;Dbxref=Genbank:WP_000131699.1;Name=WP_000131699.1;gbkey=CDS;gene=fur;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455254.1;locus_tag=STY7866_RS22590;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131699.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	28381	29307	.	+	.	ID=gene-STY7866_RS22595;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=STY7866_RS22595
NZ_CAAR01001293.1	Protein Homology	CDS	28381	29307	.	+	0	ID=cds-WP_000423368.1;Parent=gene-STY7866_RS22595;Dbxref=Genbank:WP_000423368.1;Name=WP_000423368.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455253.1;locus_tag=STY7866_RS22595;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WP_000423368.1;transl_table=11
NZ_CAAR01001293.1	RefSeq	gene	29405	30687	.	+	.	ID=gene-STY7866_RS22600;Name=tcuA;end_range=30687,.;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=STY7866_RS22600;partial=true
NZ_CAAR01001293.1	Protein Homology	CDS	29405	30687	.	+	0	ID=cds-WP_000228704.1;Parent=gene-STY7866_RS22600;Dbxref=Genbank:WP_000228704.1;Name=WP_000228704.1;end_range=30687,.;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455252.1;locus_tag=STY7866_RS22600;partial=true;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_000228704.1;transl_table=11
##sequence-region NZ_CAAR01001292.1 1 2172
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001292.1	RefSeq	region	1	2172	.	+	.	ID=NZ_CAAR01001292.1:1..2172;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001292.1	RefSeq	gene	121	672	.	+	.	ID=gene-STY7866_RS22445;Name=STY7866_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22445
NZ_CAAR01001292.1	Protein Homology	CDS	121	672	.	+	0	ID=cds-WP_000166287.1;Parent=gene-STY7866_RS22445;Dbxref=Genbank:WP_000166287.1;Name=WP_000166287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458854.1;locus_tag=STY7866_RS22445;product=ribosome-associated protein;protein_id=WP_000166287.1;transl_table=11
NZ_CAAR01001292.1	RefSeq	pseudogene	779	2100	.	-	.	ID=gene-STY7866_RS22450;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=pseudogene;locus_tag=STY7866_RS22450;pseudo=true
NZ_CAAR01001292.1	Protein Homology	CDS	779	2100	.	-	0	ID=cds-STY7866_RS22450;Parent=gene-STY7866_RS22450;Note=frameshifted;gbkey=CDS;gene=mpl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001714299.1;locus_tag=STY7866_RS22450;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001291.1 1 20815
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001291.1	RefSeq	region	1	20815	.	+	.	ID=NZ_CAAR01001291.1:1..20815;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001291.1	RefSeq	gene	1	2755	.	+	.	ID=gene-STY7866_RS22350;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=STY7866_RS22350;partial=true;start_range=.,1
NZ_CAAR01001291.1	Protein Homology	CDS	1	2755	.	+	1	ID=cds-WP_001073372.1;Parent=gene-STY7866_RS22350;Dbxref=Genbank:WP_001073372.1;Name=WP_001073372.1;gbkey=CDS;gene=metH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000096005.1;locus_tag=STY7866_RS22350;partial=true;product=methionine synthase;protein_id=WP_001073372.1;start_range=.,1;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	3012	4643	.	+	.	ID=gene-STY7866_RS22355;Name=STY7866_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22355
NZ_CAAR01001291.1	Protein Homology	CDS	3012	4643	.	+	0	ID=cds-WP_000956807.1;Parent=gene-STY7866_RS22355;Dbxref=Genbank:WP_000956807.1;Name=WP_000956807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458508.1;locus_tag=STY7866_RS22355;product=Na/Pi cotransporter family protein;protein_id=WP_000956807.1;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	4733	5422	.	-	.	ID=gene-STY7866_RS22360;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=STY7866_RS22360
NZ_CAAR01001291.1	Protein Homology	CDS	4733	5422	.	-	0	ID=cds-WP_000421788.1;Parent=gene-STY7866_RS22360;Dbxref=Genbank:WP_000421788.1;Name=WP_000421788.1;gbkey=CDS;gene=pepE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458509.1;locus_tag=STY7866_RS22360;product=dipeptidase PepE;protein_id=WP_000421788.1;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	5494	5595	.	+	.	ID=gene-STY7866_RS22365;Name=STY7866_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22365
NZ_CAAR01001291.1	Protein Homology	CDS	5494	5595	.	+	0	ID=cds-WP_010989276.1;Parent=gene-STY7866_RS22365;Dbxref=Genbank:WP_010989276.1;Name=WP_010989276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=STY7866_RS22365;product=hypothetical protein;protein_id=WP_010989276.1;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	5630	6169	.	+	.	ID=gene-STY7866_RS22370;Name=STY7866_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22370
NZ_CAAR01001291.1	Protein Homology	CDS	5630	6169	.	+	0	ID=cds-WP_001096724.1;Parent=gene-STY7866_RS22370;Dbxref=Genbank:WP_001096724.1;Name=WP_001096724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458511.1;locus_tag=STY7866_RS22370;product=DUF2058 domain-containing protein;protein_id=WP_001096724.1;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	6216	7085	.	+	.	ID=gene-STY7866_RS22375;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=STY7866_RS22375
NZ_CAAR01001291.1	Protein Homology	CDS	6216	7085	.	+	0	ID=cds-WP_000954614.1;Parent=gene-STY7866_RS22375;Dbxref=Genbank:WP_000954614.1;Name=WP_000954614.1;gbkey=CDS;gene=rluF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458512.1;locus_tag=STY7866_RS22375;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000954614.1;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	7082	7354	.	-	.	ID=gene-STY7866_RS22380;Name=STY7866_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22380
NZ_CAAR01001291.1	Protein Homology	CDS	7082	7354	.	-	0	ID=cds-WP_001207628.1;Parent=gene-STY7866_RS22380;Dbxref=Genbank:WP_001207628.1;Name=WP_001207628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458513.1;locus_tag=STY7866_RS22380;product=DUF3811 domain-containing protein;protein_id=WP_001207628.1;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	7417	8175	.	-	.	ID=gene-STY7866_RS22385;Name=STY7866_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22385
NZ_CAAR01001291.1	Protein Homology	CDS	7417	8175	.	-	0	ID=cds-WP_001068169.1;Parent=gene-STY7866_RS22385;Dbxref=Genbank:WP_001068169.1;Name=WP_001068169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458514.1;locus_tag=STY7866_RS22385;product=DeoR/GlpR transcriptional regulator;protein_id=WP_001068169.1;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	8162	9025	.	-	.	ID=gene-STY7866_RS22390;Name=STY7866_RS22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22390
NZ_CAAR01001291.1	Protein Homology	CDS	8162	9025	.	-	0	ID=cds-WP_000924650.1;Parent=gene-STY7866_RS22390;Dbxref=Genbank:WP_000924650.1;Name=WP_000924650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458515.1;locus_tag=STY7866_RS22390;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000924650.1;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	9042	9881	.	-	.	ID=gene-STY7866_RS22395;Name=STY7866_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22395
NZ_CAAR01001291.1	Protein Homology	CDS	9042	9881	.	-	0	ID=cds-WP_000472332.1;Parent=gene-STY7866_RS22395;Dbxref=Genbank:WP_000472332.1;Name=WP_000472332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458516.1;locus_tag=STY7866_RS22395;product=hypothetical protein;protein_id=WP_000472332.1;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	9905	11383	.	-	.	ID=gene-STY7866_RS22400;Name=STY7866_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22400
NZ_CAAR01001291.1	Protein Homology	CDS	9905	11383	.	-	0	ID=cds-WP_001099738.1;Parent=gene-STY7866_RS22400;Dbxref=Genbank:WP_001099738.1;Name=WP_001099738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458517.1;locus_tag=STY7866_RS22400;product=PTS sugar transporter;protein_id=WP_001099738.1;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	11686	11898	.	-	.	ID=gene-STY7866_RS29455;Name=STY7866_RS29455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29455
NZ_CAAR01001291.1	Protein Homology	CDS	11686	11898	.	-	0	ID=cds-WP_124682075.1;Parent=gene-STY7866_RS29455;Dbxref=Genbank:WP_124682075.1;Name=WP_124682075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001611653.1;locus_tag=STY7866_RS29455;product=hypothetical protein;protein_id=WP_124682075.1;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	11891	13240	.	-	.	ID=gene-STY7866_RS22405;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=STY7866_RS22405
NZ_CAAR01001291.1	Protein Homology	CDS	11891	13240	.	-	0	ID=cds-WP_000136394.1;Parent=gene-STY7866_RS22405;Dbxref=Genbank:WP_000136394.1;Name=WP_000136394.1;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458518.1;locus_tag=STY7866_RS22405;product=lysine-sensitive aspartokinase 3;protein_id=WP_000136394.1;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	13629	15278	.	+	.	ID=gene-STY7866_RS22410;Name=STY7866_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22410
NZ_CAAR01001291.1	Protein Homology	CDS	13629	15278	.	+	0	ID=cds-WP_000790033.1;Parent=gene-STY7866_RS22410;Dbxref=Genbank:WP_000790033.1;Name=WP_000790033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458519.1;locus_tag=STY7866_RS22410;product=glucose-6-phosphate isomerase;protein_id=WP_000790033.1;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	15721	15963	.	+	.	ID=gene-STY7866_RS22415;Name=STY7866_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22415
NZ_CAAR01001291.1	Protein Homology	CDS	15721	15963	.	+	0	ID=cds-WP_001541297.1;Parent=gene-STY7866_RS22415;Dbxref=Genbank:WP_001541297.1;Name=WP_001541297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=STY7866_RS22415;product=outer membrane protein;protein_id=WP_001541297.1;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	15997	16665	.	+	.	ID=gene-STY7866_RS22420;Name=STY7866_RS22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22420
NZ_CAAR01001291.1	Protein Homology	CDS	15997	16665	.	+	0	ID=cds-WP_022742863.1;Parent=gene-STY7866_RS22420;Dbxref=Genbank:WP_022742863.1;Name=WP_022742863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463088.3;locus_tag=STY7866_RS22420;product=YjbF family lipoprotein;protein_id=WP_022742863.1;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	16662	17396	.	+	.	ID=gene-STY7866_RS22425;Name=STY7866_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22425
NZ_CAAR01001291.1	Protein Homology	CDS	16662	17396	.	+	0	ID=cds-WP_000977977.1;Parent=gene-STY7866_RS22425;Dbxref=Genbank:WP_000977977.1;Name=WP_000977977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458522.1;locus_tag=STY7866_RS22425;product=capsule biosynthesis GfcC family protein;protein_id=WP_000977977.1;transl_table=11
NZ_CAAR01001291.1	RefSeq	pseudogene	17396	19490	.	+	.	ID=gene-STY7866_RS22430;Name=STY7866_RS22430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS22430;pseudo=true
NZ_CAAR01001291.1	Protein Homology	CDS	17396	19490	.	+	0	ID=cds-STY7866_RS22430;Parent=gene-STY7866_RS22430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458523.1;locus_tag=STY7866_RS22430;product=YjbH domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	19633	20043	.	+	.	ID=gene-STY7866_RS22435;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=STY7866_RS22435
NZ_CAAR01001291.1	Protein Homology	CDS	19633	20043	.	+	0	ID=cds-WP_000982749.1;Parent=gene-STY7866_RS22435;Dbxref=Genbank:WP_000982749.1;Name=WP_000982749.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458524.1;locus_tag=STY7866_RS22435;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000982749.1;transl_table=11
NZ_CAAR01001291.1	RefSeq	gene	20209	20815	.	-	.	ID=gene-STY7866_RS22440;Name=malG;end_range=20815,.;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=STY7866_RS22440;partial=true
NZ_CAAR01001291.1	Protein Homology	CDS	20209	20815	.	-	1	ID=cds-WP_000518840.1;Parent=gene-STY7866_RS22440;Dbxref=Genbank:WP_000518840.1;Name=WP_000518840.1;end_range=20815,.;gbkey=CDS;gene=malG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252048.1;locus_tag=STY7866_RS22440;partial=true;product=maltose ABC transporter permease MalG;protein_id=WP_000518840.1;transl_table=11
##sequence-region NZ_CAAR01001290.1 1 4057
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001290.1	RefSeq	region	1	4057	.	+	.	ID=NZ_CAAR01001290.1:1..4057;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001290.1	RefSeq	gene	29	910	.	+	.	ID=gene-STY7866_RS22325;Name=STY7866_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22325
NZ_CAAR01001290.1	Protein Homology	CDS	29	910	.	+	0	ID=cds-WP_000500433.1;Parent=gene-STY7866_RS22325;Dbxref=Genbank:WP_000500433.1;Name=WP_000500433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455776.1;locus_tag=STY7866_RS22325;product=5'-3' exoribonuclease;protein_id=WP_000500433.1;transl_table=11
NZ_CAAR01001290.1	RefSeq	gene	918	1538	.	+	.	ID=gene-STY7866_RS22330;Name=STY7866_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22330
NZ_CAAR01001290.1	Protein Homology	CDS	918	1538	.	+	0	ID=cds-WP_000077250.1;Parent=gene-STY7866_RS22330;Dbxref=Genbank:WP_000077250.1;Name=WP_000077250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=STY7866_RS22330;product=threonylcarbamoyl-AMP synthase;protein_id=WP_000077250.1;transl_table=11
NZ_CAAR01001290.1	RefSeq	gene	1639	2514	.	+	.	ID=gene-STY7866_RS22335;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=STY7866_RS22335
NZ_CAAR01001290.1	Protein Homology	CDS	1639	2514	.	+	0	ID=cds-WP_001291233.1;Parent=gene-STY7866_RS22335;Dbxref=Genbank:WP_001291233.1;Name=WP_001291233.1;gbkey=CDS;gene=rluB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=STY7866_RS22335;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291233.1;transl_table=11
NZ_CAAR01001290.1	RefSeq	gene	2601	3191	.	-	.	ID=gene-STY7866_RS22340;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=STY7866_RS22340
NZ_CAAR01001290.1	Protein Homology	CDS	2601	3191	.	-	0	ID=cds-WP_001278854.1;Parent=gene-STY7866_RS22340;Dbxref=Genbank:WP_001278854.1;Name=WP_001278854.1;gbkey=CDS;gene=cobO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455779.1;locus_tag=STY7866_RS22340;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278854.1;transl_table=11
NZ_CAAR01001290.1	RefSeq	gene	3188	3949	.	-	.	ID=gene-STY7866_RS22345;Name=STY7866_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22345
NZ_CAAR01001290.1	Protein Homology	CDS	3188	3949	.	-	0	ID=cds-WP_000559310.1;Parent=gene-STY7866_RS22345;Dbxref=Genbank:WP_000559310.1;Name=WP_000559310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455780.1;locus_tag=STY7866_RS22345;product=YciK family oxidoreductase;protein_id=WP_000559310.1;transl_table=11
##sequence-region NZ_CAAR01001289.1 1 3139
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001289.1	RefSeq	region	1	3139	.	+	.	ID=NZ_CAAR01001289.1:1..3139;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001289.1	RefSeq	gene	1	318	.	-	.	ID=gene-STY7866_RS22310;Name=STY7866_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22310;partial=true;start_range=.,1
NZ_CAAR01001289.1	Protein Homology	CDS	1	318	.	-	0	ID=cds-WP_000697893.1;Parent=gene-STY7866_RS22310;Dbxref=Genbank:WP_000697893.1;Name=WP_000697893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458591.1;locus_tag=STY7866_RS22310;partial=true;product=response regulator;protein_id=WP_000697893.1;start_range=.,1;transl_table=11
NZ_CAAR01001289.1	RefSeq	gene	315	1958	.	-	.	ID=gene-STY7866_RS22315;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=STY7866_RS22315
NZ_CAAR01001289.1	Protein Homology	CDS	315	1958	.	-	0	ID=cds-WP_000919286.1;Parent=gene-STY7866_RS22315;Dbxref=Genbank:WP_000919286.1;Name=WP_000919286.1;gbkey=CDS;gene=eptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458592.1;locus_tag=STY7866_RS22315;product=phosphoethanolamine transferase EptA;protein_id=WP_000919286.1;transl_table=11
NZ_CAAR01001289.1	RefSeq	gene	2092	3139	.	-	.	ID=gene-STY7866_RS22320;Name=adiC;end_range=3139,.;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=STY7866_RS22320;partial=true
NZ_CAAR01001289.1	Protein Homology	CDS	2092	3139	.	-	1	ID=cds-WP_000326816.1;Parent=gene-STY7866_RS22320;Dbxref=Genbank:WP_000326816.1;Name=WP_000326816.1;end_range=3139,.;gbkey=CDS;gene=adiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458593.1;locus_tag=STY7866_RS22320;partial=true;product=arginine/agmatine antiporter;protein_id=WP_000326816.1;transl_table=11
##sequence-region NZ_CAAR01001288.1 1 19181
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001288.1	RefSeq	region	1	19181	.	+	.	ID=NZ_CAAR01001288.1:1..19181;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001288.1	RefSeq	pseudogene	1	352	.	-	.	ID=gene-STY7866_RS22225;Name=STY7866_RS22225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS22225;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001288.1	Protein Homology	CDS	1	352	.	-	0	ID=cds-STY7866_RS22225;Parent=gene-STY7866_RS22225;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=STY7866_RS22225;partial=true;product=acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001288.1	RefSeq	gene	356	811	.	-	.	ID=gene-STY7866_RS22230;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=STY7866_RS22230
NZ_CAAR01001288.1	Protein Homology	CDS	356	811	.	-	0	ID=cds-WP_000210741.1;Parent=gene-STY7866_RS22230;Dbxref=Genbank:WP_000210741.1;Name=WP_000210741.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=STY7866_RS22230;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210741.1;transl_table=11
NZ_CAAR01001288.1	RefSeq	gene	917	1942	.	-	.	ID=gene-STY7866_RS22235;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=STY7866_RS22235
NZ_CAAR01001288.1	Protein Homology	CDS	917	1942	.	-	0	ID=cds-WP_001139265.1;Parent=gene-STY7866_RS22235;Dbxref=Genbank:WP_001139265.1;Name=WP_001139265.1;gbkey=CDS;gene=lpxD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=STY7866_RS22235;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139265.1;transl_table=11
NZ_CAAR01001288.1	RefSeq	gene	1946	2431	.	-	.	ID=gene-STY7866_RS22240;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=STY7866_RS22240
NZ_CAAR01001288.1	Protein Homology	CDS	1946	2431	.	-	0	ID=cds-WP_000758966.1;Parent=gene-STY7866_RS22240;Dbxref=Genbank:WP_000758966.1;Name=WP_000758966.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454832.1;locus_tag=STY7866_RS22240;product=molecular chaperone Skp;protein_id=WP_000758966.1;transl_table=11
NZ_CAAR01001288.1	RefSeq	gene	2554	4965	.	-	.	ID=gene-STY7866_RS22245;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=STY7866_RS22245
NZ_CAAR01001288.1	Protein Homology	CDS	2554	4965	.	-	0	ID=cds-WP_001240921.1;Parent=gene-STY7866_RS22245;Dbxref=Genbank:WP_001240921.1;Name=WP_001240921.1;gbkey=CDS;gene=bamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454831.1;locus_tag=STY7866_RS22245;product=outer membrane protein assembly factor BamA;protein_id=WP_001240921.1;transl_table=11
NZ_CAAR01001288.1	RefSeq	gene	4997	6349	.	-	.	ID=gene-STY7866_RS22250;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=STY7866_RS22250
NZ_CAAR01001288.1	Protein Homology	CDS	4997	6349	.	-	0	ID=cds-WP_000949016.1;Parent=gene-STY7866_RS22250;Dbxref=Genbank:WP_000949016.1;Name=WP_000949016.1;gbkey=CDS;gene=rseP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=STY7866_RS22250;product=sigma E protease regulator RseP;protein_id=WP_000949016.1;transl_table=11
NZ_CAAR01001288.1	RefSeq	gene	6361	7218	.	-	.	ID=gene-STY7866_RS22255;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=STY7866_RS22255
NZ_CAAR01001288.1	Protein Homology	CDS	6361	7218	.	-	0	ID=cds-WP_000922422.1;Parent=gene-STY7866_RS22255;Dbxref=Genbank:WP_000922422.1;Name=WP_000922422.1;gbkey=CDS;gene=cdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454829.1;locus_tag=STY7866_RS22255;product=phosphatidate cytidylyltransferase;protein_id=WP_000922422.1;transl_table=11
NZ_CAAR01001288.1	RefSeq	gene	7231	7989	.	-	.	ID=gene-STY7866_RS22260;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=STY7866_RS22260
NZ_CAAR01001288.1	Protein Homology	CDS	7231	7989	.	-	0	ID=cds-WP_000947409.1;Parent=gene-STY7866_RS22260;Dbxref=Genbank:WP_000947409.1;Name=WP_000947409.1;gbkey=CDS;gene=ispU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454828.1;locus_tag=STY7866_RS22260;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_000947409.1;transl_table=11
NZ_CAAR01001288.1	RefSeq	gene	8302	9498	.	-	.	ID=gene-STY7866_RS22265;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=STY7866_RS22265
NZ_CAAR01001288.1	Protein Homology	CDS	8302	9498	.	-	0	ID=cds-WP_000811892.1;Parent=gene-STY7866_RS22265;Dbxref=Genbank:WP_000811892.1;Name=WP_000811892.1;gbkey=CDS;gene=ispC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454827.1;locus_tag=STY7866_RS22265;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811892.1;transl_table=11
NZ_CAAR01001288.1	RefSeq	gene	9640	10197	.	-	.	ID=gene-STY7866_RS22270;Name=STY7866_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22270
NZ_CAAR01001288.1	Protein Homology	CDS	9640	10197	.	-	0	ID=cds-WP_000622423.1;Parent=gene-STY7866_RS22270;Dbxref=Genbank:WP_000622423.1;Name=WP_000622423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=STY7866_RS22270;product=ribosome recycling factor;protein_id=WP_000622423.1;transl_table=11
NZ_CAAR01001288.1	RefSeq	gene	10344	11069	.	-	.	ID=gene-STY7866_RS22275;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=STY7866_RS22275
NZ_CAAR01001288.1	Protein Homology	CDS	10344	11069	.	-	0	ID=cds-WP_000224567.1;Parent=gene-STY7866_RS22275;Dbxref=Genbank:WP_000224567.1;Name=WP_000224567.1;gbkey=CDS;gene=pyrH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=STY7866_RS22275;product=UMP kinase;protein_id=WP_000224567.1;transl_table=11
NZ_CAAR01001288.1	RefSeq	gene	11214	12065	.	-	.	ID=gene-STY7866_RS22280;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=STY7866_RS22280
NZ_CAAR01001288.1	Protein Homology	CDS	11214	12065	.	-	0	ID=cds-WP_000808106.1;Parent=gene-STY7866_RS22280;Dbxref=Genbank:WP_000808106.1;Name=WP_000808106.1;gbkey=CDS;gene=tsf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=STY7866_RS22280;product=elongation factor Ts;protein_id=WP_000808106.1;transl_table=11
NZ_CAAR01001288.1	RefSeq	gene	12323	13048	.	-	.	ID=gene-STY7866_RS22285;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=STY7866_RS22285
NZ_CAAR01001288.1	Protein Homology	CDS	12323	13048	.	-	0	ID=cds-WP_000246886.1;Parent=gene-STY7866_RS22285;Dbxref=Genbank:WP_000246886.1;Name=WP_000246886.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=STY7866_RS22285;product=30S ribosomal protein S2;protein_id=WP_000246886.1;transl_table=11
NZ_CAAR01001288.1	RefSeq	gene	13498	14292	.	+	.	ID=gene-STY7866_RS22290;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=STY7866_RS22290
NZ_CAAR01001288.1	Protein Homology	CDS	13498	14292	.	+	0	ID=cds-WP_001018214.1;Parent=gene-STY7866_RS22290;Dbxref=Genbank:WP_001018214.1;Name=WP_001018214.1;gbkey=CDS;gene=map;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454822.1;locus_tag=STY7866_RS22290;product=type I methionyl aminopeptidase;protein_id=WP_001018214.1;transl_table=11
NZ_CAAR01001288.1	RefSeq	gene	14405	17077	.	+	.	ID=gene-STY7866_RS22295;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=STY7866_RS22295
NZ_CAAR01001288.1	Protein Homology	CDS	14405	17077	.	+	0	ID=cds-WP_001094518.1;Parent=gene-STY7866_RS22295;Dbxref=Genbank:WP_001094518.1;Name=WP_001094518.1;gbkey=CDS;gene=glnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454821.1;locus_tag=STY7866_RS22295;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094518.1;transl_table=11
NZ_CAAR01001288.1	RefSeq	gene	17107	17931	.	+	.	ID=gene-STY7866_RS22300;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=STY7866_RS22300
NZ_CAAR01001288.1	Protein Homology	CDS	17107	17931	.	+	0	ID=cds-WP_001186669.1;Parent=gene-STY7866_RS22300;Dbxref=Genbank:WP_001186669.1;Name=WP_001186669.1;gbkey=CDS;gene=dapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=STY7866_RS22300;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186669.1;transl_table=11
NZ_CAAR01001288.1	RefSeq	pseudogene	17968	19181	.	-	.	ID=gene-STY7866_RS22305;Name=STY7866_RS22305;end_range=19181,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS22305;partial=true;pseudo=true
NZ_CAAR01001288.1	Protein Homology	CDS	17968	19181	.	-	1	ID=cds-STY7866_RS22305;Parent=gene-STY7866_RS22305;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=19181,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=STY7866_RS22305;partial=true;product=MHS family MFS transporter;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001287.1 1 5401
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001287.1	RefSeq	region	1	5401	.	+	.	ID=NZ_CAAR01001287.1:1..5401;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001287.1	RefSeq	pseudogene	1	486	.	-	.	ID=gene-STY7866_RS22190;Name=STY7866_RS22190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS22190;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001287.1	Protein Homology	CDS	1	486	.	-	0	ID=cds-STY7866_RS22190;Parent=gene-STY7866_RS22190;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454643.1;locus_tag=STY7866_RS22190;partial=true;product=arylsulfatase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001287.1	RefSeq	pseudogene	1008	1444	.	+	.	ID=gene-STY7866_RS22195;Name=STY7866_RS22195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS22195;pseudo=true
NZ_CAAR01001287.1	Protein Homology	CDS	1008	1444	.	+	0	ID=cds-STY7866_RS22195;Parent=gene-STY7866_RS22195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459036.1;locus_tag=STY7866_RS22195;product=transcriptional regulator;pseudo=true;transl_table=11
NZ_CAAR01001287.1	RefSeq	gene	1461	2456	.	-	.	ID=gene-STY7866_RS22200;Name=STY7866_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22200
NZ_CAAR01001287.1	Protein Homology	CDS	1461	2456	.	-	0	ID=cds-WP_001247397.1;Parent=gene-STY7866_RS22200;Dbxref=Genbank:WP_001247397.1;Name=WP_001247397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454641.1;locus_tag=STY7866_RS22200;product=LysR family transcriptional regulator;protein_id=WP_001247397.1;transl_table=11
NZ_CAAR01001287.1	RefSeq	gene	2826	3275	.	+	.	ID=gene-STY7866_RS22205;Name=STY7866_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22205
NZ_CAAR01001287.1	Protein Homology	CDS	2826	3275	.	+	0	ID=cds-WP_001250363.1;Parent=gene-STY7866_RS22205;Dbxref=Genbank:WP_001250363.1;Name=WP_001250363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454640.1;locus_tag=STY7866_RS22205;product=transcriptional regulator;protein_id=WP_001250363.1;transl_table=11
NZ_CAAR01001287.1	RefSeq	gene	3375	3662	.	-	.	ID=gene-STY7866_RS22210;Name=STY7866_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22210
NZ_CAAR01001287.1	Protein Homology	CDS	3375	3662	.	-	0	ID=cds-WP_000839835.1;Parent=gene-STY7866_RS22210;Dbxref=Genbank:WP_000839835.1;Name=WP_000839835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454639.1;locus_tag=STY7866_RS22210;product=hypothetical protein;protein_id=WP_000839835.1;transl_table=11
NZ_CAAR01001287.1	RefSeq	gene	3701	4546	.	-	.	ID=gene-STY7866_RS22215;Name=STY7866_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22215
NZ_CAAR01001287.1	Protein Homology	CDS	3701	4546	.	-	0	ID=cds-WP_000291399.1;Parent=gene-STY7866_RS22215;Dbxref=Genbank:WP_000291399.1;Name=WP_000291399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454638.1;locus_tag=STY7866_RS22215;product=DsbA family protein;protein_id=WP_000291399.1;transl_table=11
NZ_CAAR01001287.1	RefSeq	gene	4611	5342	.	-	.	ID=gene-STY7866_RS22220;Name=STY7866_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22220
NZ_CAAR01001287.1	Protein Homology	CDS	4611	5342	.	-	0	ID=cds-WP_001135023.1;Parent=gene-STY7866_RS22220;Dbxref=Genbank:WP_001135023.1;Name=WP_001135023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=STY7866_RS22220;product=pili/flagellar-assembly chaperone;protein_id=WP_001135023.1;transl_table=11
NZ_CAAR01001287.1	RefSeq	pseudogene	5308	5401	.	-	.	ID=gene-STY7866_RS29450;Name=STY7866_RS29450;end_range=5401,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29450;partial=true;pseudo=true
NZ_CAAR01001287.1	Protein Homology	CDS	5308	5401	.	-	2	ID=cds-STY7866_RS29450;Parent=gene-STY7866_RS29450;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5401,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454636.1;locus_tag=STY7866_RS29450;partial=true;product=fimbrial protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001286.1 1 5573
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001286.1	RefSeq	region	1	5573	.	+	.	ID=NZ_CAAR01001286.1:1..5573;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001286.1	RefSeq	gene	1	720	.	+	.	ID=gene-STY7866_RS22155;Name=STY7866_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22155;partial=true;start_range=.,1
NZ_CAAR01001286.1	Protein Homology	CDS	1	720	.	+	0	ID=cds-WP_000653010.1;Parent=gene-STY7866_RS22155;Dbxref=Genbank:WP_000653010.1;Name=WP_000653010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455612.1;locus_tag=STY7866_RS22155;partial=true;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_000653010.1;start_range=.,1;transl_table=11
NZ_CAAR01001286.1	RefSeq	gene	754	981	.	-	.	ID=gene-STY7866_RS22160;Name=STY7866_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22160
NZ_CAAR01001286.1	Protein Homology	CDS	754	981	.	-	0	ID=cds-WP_001143126.1;Parent=gene-STY7866_RS22160;Dbxref=Genbank:WP_001143126.1;Name=WP_001143126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=STY7866_RS22160;product=hypothetical protein;protein_id=WP_001143126.1;transl_table=11
NZ_CAAR01001286.1	RefSeq	gene	1002	1598	.	-	.	ID=gene-STY7866_RS22165;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=STY7866_RS22165
NZ_CAAR01001286.1	Protein Homology	CDS	1002	1598	.	-	0	ID=cds-WP_001062894.1;Parent=gene-STY7866_RS22165;Dbxref=Genbank:WP_001062894.1;Name=WP_001062894.1;gbkey=CDS;gene=wrbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455614.1;locus_tag=STY7866_RS22165;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001062894.1;transl_table=11
NZ_CAAR01001286.1	RefSeq	gene	1983	2150	.	+	.	ID=gene-STY7866_RS22170;Name=STY7866_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22170
NZ_CAAR01001286.1	Protein Homology	CDS	1983	2150	.	+	0	ID=cds-WP_001273665.1;Parent=gene-STY7866_RS22170;Dbxref=Genbank:WP_001273665.1;Name=WP_001273665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455615.1;locus_tag=STY7866_RS22170;product=general stress protein;protein_id=WP_001273665.1;transl_table=11
NZ_CAAR01001286.1	RefSeq	gene	2287	2925	.	+	.	ID=gene-STY7866_RS22175;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=STY7866_RS22175
NZ_CAAR01001286.1	Protein Homology	CDS	2287	2925	.	+	0	ID=cds-WP_000083125.1;Parent=gene-STY7866_RS22175;Dbxref=Genbank:WP_000083125.1;Name=WP_000083125.1;gbkey=CDS;gene=rutR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455616.1;locus_tag=STY7866_RS22175;product=HTH-type transcriptional regulator RutR;protein_id=WP_000083125.1;transl_table=11
NZ_CAAR01001286.1	RefSeq	gene	2922	3317	.	-	.	ID=gene-STY7866_RS22180;Name=STY7866_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22180
NZ_CAAR01001286.1	Protein Homology	CDS	2922	3317	.	-	0	ID=cds-WP_000821059.1;Parent=gene-STY7866_RS22180;Dbxref=Genbank:WP_000821059.1;Name=WP_000821059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455617.1;locus_tag=STY7866_RS22180;product=lysozyme inhibitor LprI family protein;protein_id=WP_000821059.1;transl_table=11
NZ_CAAR01001286.1	RefSeq	gene	3376	5573	.	-	.	ID=gene-STY7866_RS22185;Name=STY7866_RS22185;end_range=5573,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22185;partial=true
NZ_CAAR01001286.1	Protein Homology	CDS	3376	5573	.	-	2	ID=cds-WP_000596705.1;Parent=gene-STY7866_RS22185;Dbxref=Genbank:WP_000596705.1;Name=WP_000596705.1;end_range=5573,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455618.1;locus_tag=STY7866_RS22185;partial=true;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_000596705.1;transl_table=11
##sequence-region NZ_CAAR01001285.1 1 6783
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001285.1	RefSeq	region	1	6783	.	+	.	ID=NZ_CAAR01001285.1:1..6783;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001285.1	RefSeq	pseudogene	1	543	.	+	.	ID=gene-STY7866_RS22090;Name=STY7866_RS22090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS22090;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001285.1	Protein Homology	CDS	1	543	.	+	0	ID=cds-STY7866_RS22090;Parent=gene-STY7866_RS22090;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458607.1;locus_tag=STY7866_RS22090;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001285.1	RefSeq	gene	830	1093	.	-	.	ID=gene-STY7866_RS22095;Name=STY7866_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22095
NZ_CAAR01001285.1	Protein Homology	CDS	830	1093	.	-	0	ID=cds-WP_001682188.1;Parent=gene-STY7866_RS22095;Dbxref=Genbank:WP_001682188.1;Name=WP_001682188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682188.1;locus_tag=STY7866_RS22095;product=hypothetical protein;protein_id=WP_001682188.1;transl_table=11
NZ_CAAR01001285.1	RefSeq	gene	1201	1398	.	-	.	ID=gene-STY7866_RS29435;Name=STY7866_RS29435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29435
NZ_CAAR01001285.1	Protein Homology	CDS	1201	1398	.	-	0	ID=cds-WP_001787491.1;Parent=gene-STY7866_RS29435;Dbxref=Genbank:WP_001787491.1;Name=WP_001787491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001787491.1;locus_tag=STY7866_RS29435;product=hypothetical protein;protein_id=WP_001787491.1;transl_table=11
NZ_CAAR01001285.1	RefSeq	gene	1421	1708	.	-	.	ID=gene-STY7866_RS22110;Name=STY7866_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22110
NZ_CAAR01001285.1	Protein Homology	CDS	1421	1708	.	-	0	ID=cds-WP_001269916.1;Parent=gene-STY7866_RS22110;Dbxref=Genbank:WP_001269916.1;Name=WP_001269916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458610.1;locus_tag=STY7866_RS22110;product=GerE family regulatory protein;protein_id=WP_001269916.1;transl_table=11
NZ_CAAR01001285.1	RefSeq	gene	1705	2580	.	-	.	ID=gene-STY7866_RS22115;Name=STY7866_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22115
NZ_CAAR01001285.1	Protein Homology	CDS	1705	2580	.	-	0	ID=cds-WP_000921677.1;Parent=gene-STY7866_RS22115;Dbxref=Genbank:WP_000921677.1;Name=WP_000921677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458611.1;locus_tag=STY7866_RS22115;product=AraC family transcriptional regulator;protein_id=WP_000921677.1;transl_table=11
NZ_CAAR01001285.1	RefSeq	gene	2846	3064	.	-	.	ID=gene-STY7866_RS22125;Name=STY7866_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22125
NZ_CAAR01001285.1	Protein Homology	CDS	2846	3064	.	-	0	ID=cds-WP_010989281.1;Parent=gene-STY7866_RS22125;Dbxref=Genbank:WP_010989281.1;Name=WP_010989281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989281.1;locus_tag=STY7866_RS22125;product=hypothetical protein;protein_id=WP_010989281.1;transl_table=11
NZ_CAAR01001285.1	RefSeq	gene	3385	3678	.	+	.	ID=gene-STY7866_RS22130;Name=STY7866_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22130
NZ_CAAR01001285.1	Protein Homology	CDS	3385	3678	.	+	0	ID=cds-WP_001110456.1;Parent=gene-STY7866_RS22130;Dbxref=Genbank:WP_001110456.1;Name=WP_001110456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458613.1;locus_tag=STY7866_RS22130;product=DUF1778 domain-containing protein;protein_id=WP_001110456.1;transl_table=11
NZ_CAAR01001285.1	RefSeq	gene	3675	4166	.	+	.	ID=gene-STY7866_RS22135;Name=STY7866_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22135
NZ_CAAR01001285.1	Protein Homology	CDS	3675	4166	.	+	0	ID=cds-WP_000626103.1;Parent=gene-STY7866_RS22135;Dbxref=Genbank:WP_000626103.1;Name=WP_000626103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458614.1;locus_tag=STY7866_RS22135;product=GNAT family N-acetyltransferase;protein_id=WP_000626103.1;transl_table=11
NZ_CAAR01001285.1	RefSeq	gene	4088	4267	.	+	.	ID=gene-STY7866_RS29440;Name=STY7866_RS29440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29440
NZ_CAAR01001285.1	Protein Homology	CDS	4088	4267	.	+	0	ID=cds-WP_071532082.1;Parent=gene-STY7866_RS29440;Dbxref=Genbank:WP_071532082.1;Name=WP_071532082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175395.1;locus_tag=STY7866_RS29440;product=hypothetical protein;protein_id=WP_071532082.1;transl_table=11
NZ_CAAR01001285.1	RefSeq	gene	4407	5159	.	-	.	ID=gene-STY7866_RS22140;Name=STY7866_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22140
NZ_CAAR01001285.1	Protein Homology	CDS	4407	5159	.	-	0	ID=cds-WP_001785756.1;Parent=gene-STY7866_RS22140;Dbxref=Genbank:WP_001785756.1;Name=WP_001785756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458615.1;locus_tag=STY7866_RS22140;product=non-specific acid phosphatase;protein_id=WP_001785756.1;transl_table=11
NZ_CAAR01001285.1	RefSeq	pseudogene	5717	5791	.	+	.	ID=gene-STY7866_RS29445;Name=STY7866_RS29445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29445;partial=true;pseudo=true;start_range=.,5717
NZ_CAAR01001285.1	Protein Homology	CDS	5717	5791	.	+	0	ID=cds-STY7866_RS29445;Parent=gene-STY7866_RS29445;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003842122.1;locus_tag=STY7866_RS29445;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,5717;transl_table=11
NZ_CAAR01001285.1	RefSeq	gene	6005	6783	.	+	.	ID=gene-STY7866_RS22150;Name=STY7866_RS22150;end_range=6783,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22150;partial=true
NZ_CAAR01001285.1	Protein Homology	CDS	6005	6783	.	+	0	ID=cds-WP_001195362.1;Parent=gene-STY7866_RS22150;Dbxref=Genbank:WP_001195362.1;Name=WP_001195362.1;end_range=6783,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458616.1;locus_tag=STY7866_RS22150;partial=true;product=AAA family ATPase;protein_id=WP_001195362.1;transl_table=11
##sequence-region NZ_CAAR01001284.1 1 7136
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001284.1	RefSeq	region	1	7136	.	+	.	ID=NZ_CAAR01001284.1:1..7136;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001284.1	RefSeq	gene	1	353	.	-	.	ID=gene-STY7866_RS22055;Name=STY7866_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22055;partial=true;start_range=.,1
NZ_CAAR01001284.1	Protein Homology	CDS	1	353	.	-	0	ID=cds-WP_000235941.1;Parent=gene-STY7866_RS22055;Dbxref=Genbank:WP_000235941.1;Name=WP_000235941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458396.1;locus_tag=STY7866_RS22055;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000235941.1;start_range=.,1;transl_table=11
NZ_CAAR01001284.1	RefSeq	gene	588	824	.	-	.	ID=gene-STY7866_RS22060;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=STY7866_RS22060
NZ_CAAR01001284.1	Protein Homology	CDS	588	824	.	-	0	ID=cds-WP_000157589.1;Parent=gene-STY7866_RS22060;Dbxref=Genbank:WP_000157589.1;Name=WP_000157589.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458397.1;locus_tag=STY7866_RS22060;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157589.1;transl_table=11
NZ_CAAR01001284.1	RefSeq	pseudogene	837	3156	.	-	.	ID=gene-STY7866_RS22065;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=pseudogene;locus_tag=STY7866_RS22065;pseudo=true
NZ_CAAR01001284.1	Protein Homology	CDS	837	3156	.	-	0	ID=cds-STY7866_RS22065;Parent=gene-STY7866_RS22065;Note=frameshifted;gbkey=CDS;gene=feoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458398.1;locus_tag=STY7866_RS22065;product=Fe(2+) transporter permease subunit FeoB;pseudo=true;transl_table=11
NZ_CAAR01001284.1	RefSeq	gene	3175	3402	.	-	.	ID=gene-STY7866_RS22070;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=STY7866_RS22070
NZ_CAAR01001284.1	Protein Homology	CDS	3175	3402	.	-	0	ID=cds-WP_001160955.1;Parent=gene-STY7866_RS22070;Dbxref=Genbank:WP_001160955.1;Name=WP_001160955.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458399.1;locus_tag=STY7866_RS22070;product=ferrous iron transporter A;protein_id=WP_001160955.1;transl_table=11
NZ_CAAR01001284.1	RefSeq	gene	3839	6169	.	-	.	ID=gene-STY7866_RS22075;Name=STY7866_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22075
NZ_CAAR01001284.1	Protein Homology	CDS	3839	6169	.	-	0	ID=cds-WP_000980674.1;Parent=gene-STY7866_RS22075;Dbxref=Genbank:WP_000980674.1;Name=WP_000980674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458400.1;locus_tag=STY7866_RS22075;product=RNA-binding transcriptional accessory protein;protein_id=WP_000980674.1;transl_table=11
NZ_CAAR01001284.1	RefSeq	pseudogene	6268	6742	.	-	.	ID=gene-STY7866_RS22080;Name=greB;gbkey=Gene;gene=greB;gene_biotype=pseudogene;locus_tag=STY7866_RS22080;pseudo=true
NZ_CAAR01001284.1	Protein Homology	CDS	6268	6742	.	-	0	ID=cds-STY7866_RS22080;Parent=gene-STY7866_RS22080;Note=frameshifted;gbkey=CDS;gene=greB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=STY7866_RS22080;product=transcription elongation factor GreB;pseudo=true;transl_table=11
NZ_CAAR01001284.1	RefSeq	gene	6968	7136	.	+	.	ID=gene-STY7866_RS29430;Name=STY7866_RS29430;end_range=7136,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29430;partial=true
NZ_CAAR01001284.1	Protein Homology	CDS	6968	7136	.	+	0	ID=cds-WP_001766239.1;Parent=gene-STY7866_RS29430;Dbxref=Genbank:WP_001766239.1;Name=WP_001766239.1;end_range=7136,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653819.1;locus_tag=STY7866_RS29430;partial=true;product=response regulator;protein_id=WP_001766239.1;transl_table=11
##sequence-region NZ_CAAR01001283.1 1 15636
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001283.1	RefSeq	region	1	15636	.	+	.	ID=NZ_CAAR01001283.1:1..15636;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001283.1	RefSeq	pseudogene	1	247	.	+	.	ID=gene-STY7866_RS21960;Name=STY7866_RS21960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21960;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001283.1	Protein Homology	CDS	1	247	.	+	1	ID=cds-STY7866_RS21960;Parent=gene-STY7866_RS21960;Note=with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=STY7866_RS21960;partial=true;product=oligopeptide ABC transporter ATP-binding protein OppF;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	295	1131	.	+	.	ID=gene-STY7866_RS21965;Name=STY7866_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21965
NZ_CAAR01001283.1	Protein Homology	CDS	295	1131	.	+	0	ID=cds-WP_000059079.1;Parent=gene-STY7866_RS21965;Dbxref=Genbank:WP_000059079.1;Name=WP_000059079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455757.1;locus_tag=STY7866_RS21965;product=ion transporter;protein_id=WP_000059079.1;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	1179	1508	.	-	.	ID=gene-STY7866_RS21970;Name=STY7866_RS21970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21970
NZ_CAAR01001283.1	Protein Homology	CDS	1179	1508	.	-	0	ID=cds-WP_000425070.1;Parent=gene-STY7866_RS21970;Dbxref=Genbank:WP_000425070.1;Name=WP_000425070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015405907.1;locus_tag=STY7866_RS21970;product=YciU family protein;protein_id=WP_000425070.1;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	1542	3002	.	-	.	ID=gene-STY7866_RS21975;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=STY7866_RS21975
NZ_CAAR01001283.1	Protein Homology	CDS	1542	3002	.	-	0	ID=cds-WP_000206886.1;Parent=gene-STY7866_RS21975;Dbxref=Genbank:WP_000206886.1;Name=WP_000206886.1;gbkey=CDS;gene=cls;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=STY7866_RS21975;product=cardiolipin synthase;protein_id=WP_000206886.1;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	3145	3318	.	+	.	ID=gene-STY7866_RS29425;Name=STY7866_RS29425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29425
NZ_CAAR01001283.1	Protein Homology	CDS	3145	3318	.	+	0	ID=cds-WP_001531561.1;Parent=gene-STY7866_RS29425;Dbxref=Genbank:WP_001531561.1;Name=WP_001531561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=STY7866_RS29425;product=YciY family protein;protein_id=WP_001531561.1;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	3362	3658	.	-	.	ID=gene-STY7866_RS21980;Name=STY7866_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21980
NZ_CAAR01001283.1	Protein Homology	CDS	3362	3658	.	-	0	ID=cds-WP_000967605.1;Parent=gene-STY7866_RS21980;Dbxref=Genbank:WP_000967605.1;Name=WP_000967605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455760.1;locus_tag=STY7866_RS21980;product=YciI family protein;protein_id=WP_000967605.1;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	3882	4610	.	+	.	ID=gene-STY7866_RS21985;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=STY7866_RS21985
NZ_CAAR01001283.1	Protein Homology	CDS	3882	4610	.	+	0	ID=cds-WP_010989146.1;Parent=gene-STY7866_RS21985;Dbxref=Genbank:WP_010989146.1;Name=WP_010989146.1;gbkey=CDS;gene=tonB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455761.1;locus_tag=STY7866_RS21985;product=TonB system transport protein TonB;protein_id=WP_010989146.1;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	4669	5070	.	-	.	ID=gene-STY7866_RS21990;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=STY7866_RS21990
NZ_CAAR01001283.1	Protein Homology	CDS	4669	5070	.	-	0	ID=cds-WP_000210317.1;Parent=gene-STY7866_RS21990;Dbxref=Genbank:WP_000210317.1;Name=WP_000210317.1;gbkey=CDS;gene=yciA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455762.1;locus_tag=STY7866_RS21990;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000210317.1;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	5231	5770	.	-	.	ID=gene-STY7866_RS21995;Name=STY7866_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21995
NZ_CAAR01001283.1	Protein Homology	CDS	5231	5770	.	-	0	ID=cds-WP_000808682.1;Parent=gene-STY7866_RS21995;Dbxref=Genbank:WP_000808682.1;Name=WP_000808682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455763.1;locus_tag=STY7866_RS21995;product=septation protein A;protein_id=WP_000808682.1;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	5827	6570	.	-	.	ID=gene-STY7866_RS22000;Name=STY7866_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22000
NZ_CAAR01001283.1	Protein Homology	CDS	5827	6570	.	-	0	ID=cds-WP_000028513.1;Parent=gene-STY7866_RS22000;Dbxref=Genbank:WP_000028513.1;Name=WP_000028513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455764.1;locus_tag=STY7866_RS22000;product=UPF0259 family protein;protein_id=WP_000028513.1;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	6596	7000	.	-	.	ID=gene-STY7866_RS22005;Name=STY7866_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22005
NZ_CAAR01001283.1	Protein Homology	CDS	6596	7000	.	-	0	ID=cds-WP_000114955.1;Parent=gene-STY7866_RS22005;Dbxref=Genbank:WP_000114955.1;Name=WP_000114955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455765.1;locus_tag=STY7866_RS22005;product=YkgJ family cysteine cluster protein;protein_id=WP_000114955.1;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	7338	7976	.	+	.	ID=gene-STY7866_RS22010;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=STY7866_RS22010
NZ_CAAR01001283.1	Protein Homology	CDS	7338	7976	.	+	0	ID=cds-WP_000714798.1;Parent=gene-STY7866_RS22010;Dbxref=Genbank:WP_000714798.1;Name=WP_000714798.1;gbkey=CDS;gene=ompW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455766.1;locus_tag=STY7866_RS22010;product=outer membrane protein OmpW;protein_id=WP_000714798.1;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	8058	8936	.	-	.	ID=gene-STY7866_RS22015;Name=STY7866_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22015
NZ_CAAR01001283.1	Protein Homology	CDS	8058	8936	.	-	0	ID=cds-WP_000488351.1;Parent=gene-STY7866_RS22015;Dbxref=Genbank:WP_000488351.1;Name=WP_000488351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455767.1;locus_tag=STY7866_RS22015;product=manganese catalase family protein;protein_id=WP_000488351.1;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	8956	9462	.	-	.	ID=gene-STY7866_RS22020;Name=STY7866_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22020
NZ_CAAR01001283.1	Protein Homology	CDS	8956	9462	.	-	0	ID=cds-WP_001109977.1;Parent=gene-STY7866_RS22020;Dbxref=Genbank:WP_001109977.1;Name=WP_001109977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455768.1;locus_tag=STY7866_RS22020;product=ferritin-like domain-containing protein;protein_id=WP_001109977.1;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	9536	10039	.	-	.	ID=gene-STY7866_RS22025;Name=STY7866_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22025
NZ_CAAR01001283.1	Protein Homology	CDS	9536	10039	.	-	0	ID=cds-WP_001022822.1;Parent=gene-STY7866_RS22025;Dbxref=Genbank:WP_001022822.1;Name=WP_001022822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455769.1;locus_tag=STY7866_RS22025;product=ferritin-like domain-containing protein;protein_id=WP_001022822.1;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	10129	10311	.	-	.	ID=gene-STY7866_RS22030;Name=STY7866_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS22030
NZ_CAAR01001283.1	Protein Homology	CDS	10129	10311	.	-	0	ID=cds-WP_000807657.1;Parent=gene-STY7866_RS22030;Dbxref=Genbank:WP_000807657.1;Name=WP_000807657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455770.1;locus_tag=STY7866_RS22030;product=general stress protein;protein_id=WP_000807657.1;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	10791	11597	.	-	.	ID=gene-STY7866_RS22035;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=STY7866_RS22035
NZ_CAAR01001283.1	Protein Homology	CDS	10791	11597	.	-	0	ID=cds-WP_000443029.1;Parent=gene-STY7866_RS22035;Dbxref=Genbank:WP_000443029.1;Name=WP_000443029.1;gbkey=CDS;gene=trpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455771.1;locus_tag=STY7866_RS22035;product=tryptophan synthase subunit alpha;protein_id=WP_000443029.1;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	11597	12790	.	-	.	ID=gene-STY7866_RS22040;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=STY7866_RS22040
NZ_CAAR01001283.1	Protein Homology	CDS	11597	12790	.	-	0	ID=cds-WP_000209485.1;Parent=gene-STY7866_RS22040;Dbxref=Genbank:WP_000209485.1;Name=WP_000209485.1;gbkey=CDS;gene=trpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016158396.1;locus_tag=STY7866_RS22040;product=tryptophan synthase subunit beta;protein_id=WP_000209485.1;transl_table=11
NZ_CAAR01001283.1	RefSeq	pseudogene	12800	14159	.	-	.	ID=gene-STY7866_RS22045;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=pseudogene;locus_tag=STY7866_RS22045;pseudo=true
NZ_CAAR01001283.1	Protein Homology	CDS	12800	14159	.	-	0	ID=cds-STY7866_RS22045;Parent=gene-STY7866_RS22045;Note=frameshifted;gbkey=CDS;gene=trpCF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455773.1;locus_tag=STY7866_RS22045;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;pseudo=true;transl_table=11
NZ_CAAR01001283.1	RefSeq	gene	14163	15636	.	-	.	ID=gene-STY7866_RS22050;Name=trpD;end_range=15636,.;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=STY7866_RS22050;partial=true
NZ_CAAR01001283.1	Protein Homology	CDS	14163	15636	.	-	1	ID=cds-WP_000112857.1;Parent=gene-STY7866_RS22050;Dbxref=Genbank:WP_000112857.1;Name=WP_000112857.1;end_range=15636,.;gbkey=CDS;gene=trpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=STY7866_RS22050;partial=true;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000112857.1;transl_table=11
##sequence-region NZ_CAAR01001282.1 1 5789
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001282.1	RefSeq	region	1	5789	.	+	.	ID=NZ_CAAR01001282.1:1..5789;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001282.1	RefSeq	pseudogene	1	139	.	+	.	ID=gene-STY7866_RS29420;Name=STY7866_RS29420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29420;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001282.1	Protein Homology	CDS	1	139	.	+	1	ID=cds-STY7866_RS29420;Parent=gene-STY7866_RS29420;Note=catalyzes the formation of a meso-diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link in peptidoglycan synthesis%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=STY7866_RS29420;partial=true;product=murein L%2CD-transpeptidase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001282.1	RefSeq	gene	206	445	.	-	.	ID=gene-STY7866_RS21930;Name=STY7866_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21930
NZ_CAAR01001282.1	Protein Homology	CDS	206	445	.	-	0	ID=cds-WP_001082326.1;Parent=gene-STY7866_RS21930;Dbxref=Genbank:WP_001082326.1;Name=WP_001082326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456149.1;locus_tag=STY7866_RS21930;product=major outer membrane lipoprotein;protein_id=WP_001082326.1;transl_table=11
NZ_CAAR01001282.1	RefSeq	gene	528	764	.	-	.	ID=gene-STY7866_RS21935;Name=STY7866_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21935
NZ_CAAR01001282.1	Protein Homology	CDS	528	764	.	-	0	ID=cds-WP_001082307.1;Parent=gene-STY7866_RS21935;Dbxref=Genbank:WP_001082307.1;Name=WP_001082307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006675846.1;locus_tag=STY7866_RS21935;product=murein lipoprotein Lpp;protein_id=WP_001082307.1;transl_table=11
NZ_CAAR01001282.1	RefSeq	gene	1074	2486	.	-	.	ID=gene-STY7866_RS21940;Name=STY7866_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21940
NZ_CAAR01001282.1	Protein Homology	CDS	1074	2486	.	-	0	ID=cds-WP_000751447.1;Parent=gene-STY7866_RS21940;Dbxref=Genbank:WP_000751447.1;Name=WP_000751447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=STY7866_RS21940;product=pyruvate kinase PykF;protein_id=WP_000751447.1;transl_table=11
NZ_CAAR01001282.1	RefSeq	gene	2888	4231	.	-	.	ID=gene-STY7866_RS21945;Name=STY7866_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21945
NZ_CAAR01001282.1	Protein Homology	CDS	2888	4231	.	-	0	ID=cds-WP_000756081.1;Parent=gene-STY7866_RS21945;Dbxref=Genbank:WP_000756081.1;Name=WP_000756081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456146.1;locus_tag=STY7866_RS21945;product=APC family permease;protein_id=WP_000756081.1;transl_table=11
NZ_CAAR01001282.1	RefSeq	pseudogene	4253	4941	.	-	.	ID=gene-STY7866_RS21950;Name=STY7866_RS21950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21950;pseudo=true
NZ_CAAR01001282.1	Protein Homology	CDS	4253	4941	.	-	0	ID=cds-STY7866_RS21950;Parent=gene-STY7866_RS21950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=STY7866_RS21950;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11
NZ_CAAR01001282.1	RefSeq	gene	4954	5736	.	-	.	ID=gene-STY7866_RS21955;Name=STY7866_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21955
NZ_CAAR01001282.1	Protein Homology	CDS	4954	5736	.	-	0	ID=cds-WP_000697191.1;Parent=gene-STY7866_RS21955;Dbxref=Genbank:WP_000697191.1;Name=WP_000697191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697180.1;locus_tag=STY7866_RS21955;product=hypothetical protein;protein_id=WP_000697191.1;transl_table=11
##sequence-region NZ_CAAR01001281.1 1 2143
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001281.1	RefSeq	region	1	2143	.	+	.	ID=NZ_CAAR01001281.1:1..2143;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001281.1	RefSeq	gene	1	640	.	-	.	ID=gene-STY7866_RS21910;Name=STY7866_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21910;partial=true;start_range=.,1
NZ_CAAR01001281.1	Protein Homology	CDS	1	640	.	-	0	ID=cds-WP_000480168.1;Parent=gene-STY7866_RS21910;Dbxref=Genbank:WP_000480168.1;Name=WP_000480168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455553.1;locus_tag=STY7866_RS21910;partial=true;product=T3SS effector NleG family protein;protein_id=WP_000480168.1;start_range=.,1;transl_table=11
NZ_CAAR01001281.1	RefSeq	gene	953	1231	.	-	.	ID=gene-STY7866_RS21915;Name=STY7866_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21915
NZ_CAAR01001281.1	Protein Homology	CDS	953	1231	.	-	0	ID=cds-WP_000497443.1;Parent=gene-STY7866_RS21915;Dbxref=Genbank:WP_000497443.1;Name=WP_000497443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455554.1;locus_tag=STY7866_RS21915;product=DinI-like family protein;protein_id=WP_000497443.1;transl_table=11
NZ_CAAR01001281.1	RefSeq	pseudogene	1657	2143	.	+	.	ID=gene-STY7866_RS21920;Name=pepN;end_range=2143,.;gbkey=Gene;gene=pepN;gene_biotype=pseudogene;locus_tag=STY7866_RS21920;partial=true;pseudo=true
NZ_CAAR01001281.1	Protein Homology	CDS	1657	2143	.	+	0	ID=cds-STY7866_RS21920;Parent=gene-STY7866_RS21920;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2143,.;gbkey=CDS;gene=pepN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=STY7866_RS21920;partial=true;product=aminopeptidase N;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001280.1 1 8428
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001280.1	RefSeq	region	1	8428	.	+	.	ID=NZ_CAAR01001280.1:1..8428;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001280.1	RefSeq	pseudogene	1	94	.	+	.	ID=gene-STY7866_RS29415;Name=STY7866_RS29415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29415;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001280.1	Protein Homology	CDS	1	94	.	+	1	ID=cds-STY7866_RS29415;Parent=gene-STY7866_RS29415;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456183.1;locus_tag=STY7866_RS29415;partial=true;product=DUF2219 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001280.1	RefSeq	gene	143	901	.	-	.	ID=gene-STY7866_RS21860;Name=STY7866_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21860
NZ_CAAR01001280.1	Protein Homology	CDS	143	901	.	-	0	ID=cds-WP_000770984.1;Parent=gene-STY7866_RS21860;Dbxref=Genbank:WP_000770984.1;Name=WP_000770984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456184.1;locus_tag=STY7866_RS21860;product=YdiY family protein;protein_id=WP_000770984.1;transl_table=11
NZ_CAAR01001280.1	RefSeq	gene	1190	2122	.	+	.	ID=gene-STY7866_RS21865;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=STY7866_RS21865
NZ_CAAR01001280.1	Protein Homology	CDS	1190	2122	.	+	0	ID=cds-WP_000251706.1;Parent=gene-STY7866_RS21865;Dbxref=Genbank:WP_000251706.1;Name=WP_000251706.1;gbkey=CDS;gene=pfkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456185.1;locus_tag=STY7866_RS21865;product=6-phosphofructokinase II;protein_id=WP_000251706.1;transl_table=11
NZ_CAAR01001280.1	RefSeq	gene	2219	2509	.	+	.	ID=gene-STY7866_RS21870;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=STY7866_RS21870
NZ_CAAR01001280.1	Protein Homology	CDS	2219	2509	.	+	0	ID=cds-WP_000146133.1;Parent=gene-STY7866_RS21870;Dbxref=Genbank:WP_000146133.1;Name=WP_000146133.1;gbkey=CDS;gene=ghoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456186.1;locus_tag=STY7866_RS21870;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146133.1;transl_table=11
NZ_CAAR01001280.1	RefSeq	gene	2616	3476	.	+	.	ID=gene-STY7866_RS21875;Name=STY7866_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21875
NZ_CAAR01001280.1	Protein Homology	CDS	2616	3476	.	+	0	ID=cds-WP_000267686.1;Parent=gene-STY7866_RS21875;Dbxref=Genbank:WP_000267686.1;Name=WP_000267686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456187.1;locus_tag=STY7866_RS21875;product=fructosamine kinase family protein;protein_id=WP_000267686.1;transl_table=11
NZ_CAAR01001280.1	RefSeq	pseudogene	3519	4054	.	-	.	ID=gene-STY7866_RS21880;Name=STY7866_RS21880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21880;pseudo=true
NZ_CAAR01001280.1	Protein Homology	CDS	3519	4054	.	-	0	ID=cds-STY7866_RS21880;Parent=gene-STY7866_RS21880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456188.1;locus_tag=STY7866_RS21880;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01001280.1	RefSeq	gene	4205	4873	.	+	.	ID=gene-STY7866_RS21885;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=STY7866_RS21885
NZ_CAAR01001280.1	Protein Homology	CDS	4205	4873	.	+	0	ID=cds-WP_000106859.1;Parent=gene-STY7866_RS21885;Dbxref=Genbank:WP_000106859.1;Name=WP_000106859.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456189.1;locus_tag=STY7866_RS21885;product=hexitol phosphatase HxpB;protein_id=WP_000106859.1;transl_table=11
NZ_CAAR01001280.1	RefSeq	gene	5011	5610	.	+	.	ID=gene-STY7866_RS21890;Name=STY7866_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21890
NZ_CAAR01001280.1	Protein Homology	CDS	5011	5610	.	+	0	ID=cds-WP_000505801.1;Parent=gene-STY7866_RS21890;Dbxref=Genbank:WP_000505801.1;Name=WP_000505801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456190.3;locus_tag=STY7866_RS21890;product=metal-dependent hydrolase;protein_id=WP_000505801.1;transl_table=11
NZ_CAAR01001280.1	RefSeq	gene	5747	7138	.	+	.	ID=gene-STY7866_RS21895;Name=STY7866_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21895
NZ_CAAR01001280.1	Protein Homology	CDS	5747	7138	.	+	0	ID=cds-WP_001010658.1;Parent=gene-STY7866_RS21895;Dbxref=Genbank:WP_001010658.1;Name=WP_001010658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=STY7866_RS21895;product=L-cystine transporter;protein_id=WP_001010658.1;transl_table=11
NZ_CAAR01001280.1	RefSeq	gene	7241	7483	.	-	.	ID=gene-STY7866_RS21900;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=STY7866_RS21900
NZ_CAAR01001280.1	Protein Homology	CDS	7241	7483	.	-	0	ID=cds-WP_000977510.1;Parent=gene-STY7866_RS21900;Dbxref=Genbank:WP_000977510.1;Name=WP_000977510.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456192.1;locus_tag=STY7866_RS21900;product=cell division activator CedA;protein_id=WP_000977510.1;transl_table=11
NZ_CAAR01001280.1	RefSeq	gene	7700	8428	.	+	.	ID=gene-STY7866_RS21905;Name=STY7866_RS21905;end_range=8428,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21905;partial=true
NZ_CAAR01001280.1	Protein Homology	CDS	7700	8428	.	+	0	ID=cds-WP_000019092.1;Parent=gene-STY7866_RS21905;Dbxref=Genbank:WP_000019092.1;Name=WP_000019092.1;end_range=8428,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456193.1;locus_tag=STY7866_RS21905;partial=true;product=catalase;protein_id=WP_000019092.1;transl_table=11
##sequence-region NZ_CAAR01001279.1 1 9801
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001279.1	RefSeq	region	1	9801	.	+	.	ID=NZ_CAAR01001279.1:1..9801;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001279.1	RefSeq	gene	1	964	.	-	.	ID=gene-STY7866_RS21805;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=STY7866_RS21805;partial=true;start_range=.,1
NZ_CAAR01001279.1	Protein Homology	CDS	1	964	.	-	0	ID=cds-WP_000832530.1;Parent=gene-STY7866_RS21805;Dbxref=Genbank:WP_000832530.1;Name=WP_000832530.1;gbkey=CDS;gene=actP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132593.1;locus_tag=STY7866_RS21805;partial=true;product=cation/acetate symporter ActP;protein_id=WP_000832530.1;start_range=.,1;transl_table=11
NZ_CAAR01001279.1	RefSeq	gene	961	1275	.	-	.	ID=gene-STY7866_RS21810;Name=STY7866_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21810
NZ_CAAR01001279.1	Protein Homology	CDS	961	1275	.	-	0	ID=cds-WP_000999620.1;Parent=gene-STY7866_RS21810;Dbxref=Genbank:WP_000999620.1;Name=WP_000999620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458572.1;locus_tag=STY7866_RS21810;product=DUF485 domain-containing protein;protein_id=WP_000999620.1;transl_table=11
NZ_CAAR01001279.1	RefSeq	gene	1514	3472	.	-	.	ID=gene-STY7866_RS21815;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=STY7866_RS21815
NZ_CAAR01001279.1	Protein Homology	CDS	1514	3472	.	-	0	ID=cds-WP_000083869.1;Parent=gene-STY7866_RS21815;Dbxref=Genbank:WP_000083869.1;Name=WP_000083869.1;gbkey=CDS;gene=acs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006816721.1;locus_tag=STY7866_RS21815;product=acetate--CoA ligase;protein_id=WP_000083869.1;transl_table=11
NZ_CAAR01001279.1	RefSeq	gene	3904	5340	.	+	.	ID=gene-STY7866_RS21825;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=STY7866_RS21825
NZ_CAAR01001279.1	Protein Homology	CDS	3904	5340	.	+	0	ID=cds-WP_000101783.1;Parent=gene-STY7866_RS21825;Dbxref=Genbank:WP_000101783.1;Name=WP_000101783.1;gbkey=CDS;gene=nrfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458575.1;locus_tag=STY7866_RS21825;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000101783.1;transl_table=11
NZ_CAAR01001279.1	RefSeq	gene	5452	6018	.	+	.	ID=gene-STY7866_RS21830;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=STY7866_RS21830
NZ_CAAR01001279.1	Protein Homology	CDS	5452	6018	.	+	0	ID=cds-WP_000115063.1;Parent=gene-STY7866_RS21830;Dbxref=Genbank:WP_000115063.1;Name=WP_000115063.1;gbkey=CDS;gene=nrfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458576.1;locus_tag=STY7866_RS21830;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_000115063.1;transl_table=11
NZ_CAAR01001279.1	RefSeq	gene	6015	6686	.	+	.	ID=gene-STY7866_RS21835;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=STY7866_RS21835
NZ_CAAR01001279.1	Protein Homology	CDS	6015	6686	.	+	0	ID=cds-WP_001278023.1;Parent=gene-STY7866_RS21835;Dbxref=Genbank:WP_001278023.1;Name=WP_001278023.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458577.1;locus_tag=STY7866_RS21835;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_001278023.1;transl_table=11
NZ_CAAR01001279.1	RefSeq	gene	6683	7639	.	+	.	ID=gene-STY7866_RS21840;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=STY7866_RS21840
NZ_CAAR01001279.1	Protein Homology	CDS	6683	7639	.	+	0	ID=cds-WP_000199631.1;Parent=gene-STY7866_RS21840;Dbxref=Genbank:WP_000199631.1;Name=WP_000199631.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458578.1;locus_tag=STY7866_RS21840;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_000199631.1;transl_table=11
NZ_CAAR01001279.1	RefSeq	gene	7632	9368	.	+	.	ID=gene-STY7866_RS21845;Name=STY7866_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21845
NZ_CAAR01001279.1	Protein Homology	CDS	7632	9368	.	+	0	ID=cds-WP_000551688.1;Parent=gene-STY7866_RS21845;Dbxref=Genbank:WP_000551688.1;Name=WP_000551688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458579.1;locus_tag=STY7866_RS21845;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_000551688.1;transl_table=11
NZ_CAAR01001279.1	RefSeq	gene	9361	9801	.	+	.	ID=gene-STY7866_RS21850;Name=nrfF;end_range=9801,.;gbkey=Gene;gene=nrfF;gene_biotype=protein_coding;locus_tag=STY7866_RS21850;partial=true
NZ_CAAR01001279.1	Protein Homology	CDS	9361	9801	.	+	0	ID=cds-WP_001228788.1;Parent=gene-STY7866_RS21850;Dbxref=Genbank:WP_001228788.1;Name=WP_001228788.1;end_range=9801,.;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155376.1;locus_tag=STY7866_RS21850;partial=true;product=heme lyase NrfEFG subunit NrfF;protein_id=WP_001228788.1;transl_table=11
##sequence-region NZ_CAAR01001278.1 1 7451
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001278.1	RefSeq	region	1	7451	.	+	.	ID=NZ_CAAR01001278.1:1..7451;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001278.1	RefSeq	gene	1	552	.	+	.	ID=gene-STY7866_RS21780;Name=STY7866_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21780;partial=true;start_range=.,1
NZ_CAAR01001278.1	Protein Homology	CDS	1	552	.	+	0	ID=cds-WP_000707275.1;Parent=gene-STY7866_RS21780;Dbxref=Genbank:WP_000707275.1;Name=WP_000707275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457355.1;locus_tag=STY7866_RS21780;partial=true;product=glycerate kinase;protein_id=WP_000707275.1;start_range=.,1;transl_table=11
NZ_CAAR01001278.1	RefSeq	gene	596	3352	.	-	.	ID=gene-STY7866_RS21785;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=STY7866_RS21785
NZ_CAAR01001278.1	Protein Homology	CDS	596	3352	.	-	0	ID=cds-WP_000186405.1;Parent=gene-STY7866_RS21785;Dbxref=Genbank:WP_000186405.1;Name=WP_000186405.1;gbkey=CDS;gene=barA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457354.1;locus_tag=STY7866_RS21785;product=two-component sensor histidine kinase BarA;protein_id=WP_000186405.1;transl_table=11
NZ_CAAR01001278.1	RefSeq	gene	3410	4705	.	+	.	ID=gene-STY7866_RS21790;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=STY7866_RS21790
NZ_CAAR01001278.1	Protein Homology	CDS	3410	4705	.	+	0	ID=cds-WP_000046844.1;Parent=gene-STY7866_RS21790;Dbxref=Genbank:WP_000046844.1;Name=WP_000046844.1;gbkey=CDS;gene=rlmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457353.1;locus_tag=STY7866_RS21790;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046844.1;transl_table=11
NZ_CAAR01001278.1	RefSeq	gene	4757	6991	.	+	.	ID=gene-STY7866_RS21795;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=STY7866_RS21795
NZ_CAAR01001278.1	Protein Homology	CDS	4757	6991	.	+	0	ID=cds-WP_000226841.1;Parent=gene-STY7866_RS21795;Dbxref=Genbank:WP_000226841.1;Name=WP_000226841.1;gbkey=CDS;gene=relA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457352.1;locus_tag=STY7866_RS21795;product=GTP diphosphokinase;protein_id=WP_000226841.1;transl_table=11
NZ_CAAR01001278.1	RefSeq	gene	7076	7432	.	+	.	ID=gene-STY7866_RS21800;Name=STY7866_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21800
NZ_CAAR01001278.1	Protein Homology	CDS	7076	7432	.	+	0	ID=cds-WP_010989226.1;Parent=gene-STY7866_RS21800;Dbxref=Genbank:WP_010989226.1;Name=WP_010989226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457351.1;locus_tag=STY7866_RS21800;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_010989226.1;transl_table=11
##sequence-region NZ_CAAR01001277.1 1 13056
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001277.1	RefSeq	region	1	13056	.	+	.	ID=NZ_CAAR01001277.1:1..13056;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001277.1	RefSeq	gene	1	597	.	+	.	ID=gene-STY7866_RS21705;Name=STY7866_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21705;partial=true;start_range=.,1
NZ_CAAR01001277.1	Protein Homology	CDS	1	597	.	+	0	ID=cds-WP_000352478.1;Parent=gene-STY7866_RS21705;Dbxref=Genbank:WP_000352478.1;Name=WP_000352478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457477.1;locus_tag=STY7866_RS21705;partial=true;product=M48 family metallopeptidase;protein_id=WP_000352478.1;start_range=.,1;transl_table=11
NZ_CAAR01001277.1	RefSeq	gene	698	1618	.	-	.	ID=gene-STY7866_RS21710;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=STY7866_RS21710
NZ_CAAR01001277.1	Protein Homology	CDS	698	1618	.	-	0	ID=cds-WP_000105550.1;Parent=gene-STY7866_RS21710;Dbxref=Genbank:WP_000105550.1;Name=WP_000105550.1;gbkey=CDS;gene=speB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457478.1;locus_tag=STY7866_RS21710;product=agmatinase;protein_id=WP_000105550.1;transl_table=11
NZ_CAAR01001277.1	RefSeq	pseudogene	1846	3823	.	-	.	ID=gene-STY7866_RS21715;Name=speA;gbkey=Gene;gene=speA;gene_biotype=pseudogene;locus_tag=STY7866_RS21715;pseudo=true
NZ_CAAR01001277.1	Protein Homology	CDS	1846	3823	.	-	0	ID=cds-STY7866_RS21715;Parent=gene-STY7866_RS21715;Note=frameshifted;gbkey=CDS;gene=speA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007752219.1;locus_tag=STY7866_RS21715;product=biosynthetic arginine decarboxylase;pseudo=true;transl_table=11
NZ_CAAR01001277.1	RefSeq	gene	3832	3963	.	-	.	ID=gene-STY7866_RS21720;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=STY7866_RS21720
NZ_CAAR01001277.1	Protein Homology	CDS	3832	3963	.	-	0	ID=cds-WP_000729109.1;Parent=gene-STY7866_RS21720;Dbxref=Genbank:WP_000729109.1;Name=WP_000729109.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457480.1;locus_tag=STY7866_RS21720;product=acid stress response protein YqgB;protein_id=WP_000729109.1;transl_table=11
NZ_CAAR01001277.1	RefSeq	gene	4258	4557	.	-	.	ID=gene-STY7866_RS21725;Name=STY7866_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21725
NZ_CAAR01001277.1	GeneMarkS-2+	CDS	4258	4557	.	-	0	ID=cds-WP_001803086.1;Parent=gene-STY7866_RS21725;Dbxref=Genbank:WP_001803086.1;Name=WP_001803086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=STY7866_RS21725;product=hypothetical protein;protein_id=WP_001803086.1;transl_table=11
NZ_CAAR01001277.1	RefSeq	gene	4613	5767	.	+	.	ID=gene-STY7866_RS21730;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=STY7866_RS21730
NZ_CAAR01001277.1	Protein Homology	CDS	4613	5767	.	+	0	ID=cds-WP_001062140.1;Parent=gene-STY7866_RS21730;Dbxref=Genbank:WP_001062140.1;Name=WP_001062140.1;gbkey=CDS;gene=metK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=STY7866_RS21730;product=methionine adenosyltransferase;protein_id=WP_001062140.1;transl_table=11
NZ_CAAR01001277.1	RefSeq	gene	6260	7654	.	+	.	ID=gene-STY7866_RS21735;Name=STY7866_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21735
NZ_CAAR01001277.1	Protein Homology	CDS	6260	7654	.	+	0	ID=cds-WP_001113171.1;Parent=gene-STY7866_RS21735;Dbxref=Genbank:WP_001113171.1;Name=WP_001113171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457483.1;locus_tag=STY7866_RS21735;product=sugar porter family MFS transporter;protein_id=WP_001113171.1;transl_table=11
NZ_CAAR01001277.1	RefSeq	gene	7733	8230	.	+	.	ID=gene-STY7866_RS21740;Name=STY7866_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21740
NZ_CAAR01001277.1	Protein Homology	CDS	7733	8230	.	+	0	ID=cds-WP_000856775.1;Parent=gene-STY7866_RS21740;Dbxref=Genbank:WP_000856775.1;Name=WP_000856775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457484.1;locus_tag=STY7866_RS21740;product=SprT family zinc-dependent metalloprotease;protein_id=WP_000856775.1;transl_table=11
NZ_CAAR01001277.1	RefSeq	gene	8326	9033	.	+	.	ID=gene-STY7866_RS21745;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=STY7866_RS21745
NZ_CAAR01001277.1	Protein Homology	CDS	8326	9033	.	+	0	ID=cds-WP_000286121.1;Parent=gene-STY7866_RS21745;Dbxref=Genbank:WP_000286121.1;Name=WP_000286121.1;gbkey=CDS;gene=endA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457485.1;locus_tag=STY7866_RS21745;product=deoxyribonuclease I;protein_id=WP_000286121.1;transl_table=11
NZ_CAAR01001277.1	RefSeq	gene	9110	9841	.	+	.	ID=gene-STY7866_RS21750;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=STY7866_RS21750
NZ_CAAR01001277.1	Protein Homology	CDS	9110	9841	.	+	0	ID=cds-WP_001800534.1;Parent=gene-STY7866_RS21750;Dbxref=Genbank:WP_001800534.1;Name=WP_001800534.1;gbkey=CDS;gene=rsmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457486.1;locus_tag=STY7866_RS21750;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001800534.1;transl_table=11
NZ_CAAR01001277.1	RefSeq	gene	9861	10808	.	+	.	ID=gene-STY7866_RS21755;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=STY7866_RS21755
NZ_CAAR01001277.1	Protein Homology	CDS	9861	10808	.	+	0	ID=cds-WP_000593242.1;Parent=gene-STY7866_RS21755;Dbxref=Genbank:WP_000593242.1;Name=WP_000593242.1;gbkey=CDS;gene=gshB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457487.1;locus_tag=STY7866_RS21755;product=glutathione synthase;protein_id=WP_000593242.1;transl_table=11
NZ_CAAR01001277.1	RefSeq	pseudogene	11024	11588	.	+	.	ID=gene-STY7866_RS21760;Name=STY7866_RS21760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21760;pseudo=true
NZ_CAAR01001277.1	Protein Homology	CDS	11024	11588	.	+	0	ID=cds-STY7866_RS21760;Parent=gene-STY7866_RS21760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457488.1;locus_tag=STY7866_RS21760;product=YqgE/AlgH family protein;pseudo=true;transl_table=11
NZ_CAAR01001277.1	RefSeq	gene	11588	12004	.	+	.	ID=gene-STY7866_RS21765;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=STY7866_RS21765
NZ_CAAR01001277.1	Protein Homology	CDS	11588	12004	.	+	0	ID=cds-WP_001285491.1;Parent=gene-STY7866_RS21765;Dbxref=Genbank:WP_001285491.1;Name=WP_001285491.1;gbkey=CDS;gene=ruvX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457489.1;locus_tag=STY7866_RS21765;product=Holliday junction resolvase RuvX;protein_id=WP_001285491.1;transl_table=11
NZ_CAAR01001277.1	RefSeq	gene	12051	12737	.	-	.	ID=gene-STY7866_RS21770;Name=STY7866_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21770
NZ_CAAR01001277.1	Protein Homology	CDS	12051	12737	.	-	0	ID=cds-WP_000098333.1;Parent=gene-STY7866_RS21770;Dbxref=Genbank:WP_000098333.1;Name=WP_000098333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457490.1;locus_tag=STY7866_RS21770;product=global regulatory protein;protein_id=WP_000098333.1;transl_table=11
NZ_CAAR01001277.1	RefSeq	pseudogene	12867	13056	.	-	.	ID=gene-STY7866_RS21775;Name=STY7866_RS21775;end_range=13056,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21775;partial=true;pseudo=true
NZ_CAAR01001277.1	Protein Homology	CDS	12867	13056	.	-	1	ID=cds-STY7866_RS21775;Parent=gene-STY7866_RS21775;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=13056,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457491.1;locus_tag=STY7866_RS21775;partial=true;product=type IV pili twitching motility protein PilT;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001276.1 1 7808
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001276.1	RefSeq	region	1	7808	.	+	.	ID=NZ_CAAR01001276.1:1..7808;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001276.1	RefSeq	gene	216	1457	.	+	.	ID=gene-STY7866_RS21685;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=STY7866_RS21685
NZ_CAAR01001276.1	Protein Homology	CDS	216	1457	.	+	0	ID=cds-WP_000678824.1;Parent=gene-STY7866_RS21685;Dbxref=Genbank:WP_000678824.1;Name=WP_000678824.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456672.1;locus_tag=STY7866_RS21685;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_000678824.1;transl_table=11
NZ_CAAR01001276.1	RefSeq	gene	1457	4579	.	+	.	ID=gene-STY7866_RS21690;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=STY7866_RS21690
NZ_CAAR01001276.1	Protein Homology	CDS	1457	4579	.	+	0	ID=cds-WP_001197813.1;Parent=gene-STY7866_RS21690;Dbxref=Genbank:WP_001197813.1;Name=WP_001197813.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456673.1;locus_tag=STY7866_RS21690;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_001197813.1;transl_table=11
NZ_CAAR01001276.1	RefSeq	gene	4580	7660	.	+	.	ID=gene-STY7866_RS21695;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=STY7866_RS21695
NZ_CAAR01001276.1	Protein Homology	CDS	4580	7660	.	+	0	ID=cds-WP_001210088.1;Parent=gene-STY7866_RS21695;Dbxref=Genbank:WP_001210088.1;Name=WP_001210088.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456674.1;locus_tag=STY7866_RS21695;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_001210088.1;transl_table=11
NZ_CAAR01001276.1	RefSeq	pseudogene	7657	7808	.	+	.	ID=gene-STY7866_RS29410;Name=STY7866_RS29410;end_range=7808,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29410;partial=true;pseudo=true
NZ_CAAR01001276.1	Protein Homology	CDS	7657	7808	.	+	0	ID=cds-STY7866_RS29410;Parent=gene-STY7866_RS29410;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7808,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456675.1;locus_tag=STY7866_RS29410;partial=true;product=multidrug transporter subunit MdtD;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001275.1 1 7999
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001275.1	RefSeq	region	1	7999	.	+	.	ID=NZ_CAAR01001275.1:1..7999;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001275.1	RefSeq	pseudogene	241	1738	.	-	.	ID=gene-STY7866_RS21650;Name=STY7866_RS21650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21650;pseudo=true
NZ_CAAR01001275.1	Protein Homology	CDS	241	1738	.	-	0	ID=cds-STY7866_RS21650;Parent=gene-STY7866_RS21650;Note=Members of the Solute:Sodium Symporter (SSS)%2C TC 2.A.21 as described in tcdb.org%2C catalyze solute:Na+ symport. Known solutes for members of the family include sugars%2C amino acids%2C nucleosides%2C inositols%2C vitamins%2C urea or anions%2C depending on the system.%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=STY7866_RS21650;product=sodium/solute symporter;pseudo=true;transl_table=11
NZ_CAAR01001275.1	RefSeq	gene	2075	2755	.	-	.	ID=gene-STY7866_RS21655;Name=STY7866_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21655
NZ_CAAR01001275.1	Protein Homology	CDS	2075	2755	.	-	0	ID=cds-WP_000054243.1;Parent=gene-STY7866_RS21655;Dbxref=Genbank:WP_000054243.1;Name=WP_000054243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455624.1;locus_tag=STY7866_RS21655;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054243.1;transl_table=11
NZ_CAAR01001275.1	RefSeq	gene	3262	4422	.	+	.	ID=gene-STY7866_RS21660;Name=STY7866_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21660
NZ_CAAR01001275.1	Protein Homology	CDS	3262	4422	.	+	0	ID=cds-WP_000525767.1;Parent=gene-STY7866_RS21660;Dbxref=Genbank:WP_000525767.1;Name=WP_000525767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455625.1;locus_tag=STY7866_RS21660;product=N-acetylneuraminate epimerase;protein_id=WP_000525767.1;transl_table=11
NZ_CAAR01001275.1	RefSeq	gene	4459	5151	.	+	.	ID=gene-STY7866_RS21665;Name=STY7866_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21665
NZ_CAAR01001275.1	Protein Homology	CDS	4459	5151	.	+	0	ID=cds-WP_000700857.1;Parent=gene-STY7866_RS21665;Dbxref=Genbank:WP_000700857.1;Name=WP_000700857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455626.1;locus_tag=STY7866_RS21665;product=membrane protein;protein_id=WP_000700857.1;transl_table=11
NZ_CAAR01001275.1	RefSeq	gene	5505	6713	.	+	.	ID=gene-STY7866_RS21670;Name=STY7866_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21670
NZ_CAAR01001275.1	Protein Homology	CDS	5505	6713	.	+	0	ID=cds-WP_151260017.1;Parent=gene-STY7866_RS21670;Dbxref=Genbank:WP_151260017.1;Name=WP_151260017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001803461.1;locus_tag=STY7866_RS21670;product=MFS transporter;protein_id=WP_151260017.1;transl_table=11
NZ_CAAR01001275.1	RefSeq	gene	6724	7830	.	+	.	ID=gene-STY7866_RS21675;Name=STY7866_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21675
NZ_CAAR01001275.1	Protein Homology	CDS	6724	7830	.	+	0	ID=cds-WP_001779729.1;Parent=gene-STY7866_RS21675;Dbxref=Genbank:WP_001779729.1;Name=WP_001779729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=STY7866_RS21675;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_001779729.1;transl_table=11
##sequence-region NZ_CAAR01001274.1 1 14014
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001274.1	RefSeq	region	1	14014	.	+	.	ID=NZ_CAAR01001274.1:1..14014;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001274.1	RefSeq	gene	1	853	.	+	.	ID=gene-STY7866_RS21595;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=STY7866_RS21595;partial=true;start_range=.,1
NZ_CAAR01001274.1	Protein Homology	CDS	1	853	.	+	1	ID=cds-WP_000430916.1;Parent=gene-STY7866_RS21595;Dbxref=Genbank:WP_000430916.1;Name=WP_000430916.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454674.1;locus_tag=STY7866_RS21595;partial=true;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000430916.1;start_range=.,1;transl_table=11
NZ_CAAR01001274.1	RefSeq	gene	1033	1854	.	+	.	ID=gene-STY7866_RS21600;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=STY7866_RS21600
NZ_CAAR01001274.1	Protein Homology	CDS	1033	1854	.	+	0	ID=cds-WP_000544030.1;Parent=gene-STY7866_RS21600;Dbxref=Genbank:WP_000544030.1;Name=WP_000544030.1;gbkey=CDS;gene=dapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454675.1;locus_tag=STY7866_RS21600;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000544030.1;transl_table=11
NZ_CAAR01001274.1	RefSeq	pseudogene	2010	2211	.	+	.	ID=gene-STY7866_RS29405;Name=STY7866_RS29405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29405;partial=true;pseudo=true;start_range=.,2010
NZ_CAAR01001274.1	Protein Homology	CDS	2010	2211	.	+	0	ID=cds-STY7866_RS29405;Parent=gene-STY7866_RS29405;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446529.1;locus_tag=STY7866_RS29405;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2010;transl_table=11
NZ_CAAR01001274.1	RefSeq	gene	2716	3864	.	+	.	ID=gene-STY7866_RS21605;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=STY7866_RS21605
NZ_CAAR01001274.1	Protein Homology	CDS	2716	3864	.	+	0	ID=cds-WP_000597277.1;Parent=gene-STY7866_RS21605;Dbxref=Genbank:WP_000597277.1;Name=WP_000597277.1;gbkey=CDS;gene=carA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454676.1;locus_tag=STY7866_RS21605;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_000597277.1;transl_table=11
NZ_CAAR01001274.1	RefSeq	gene	3880	7107	.	+	.	ID=gene-STY7866_RS21610;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=STY7866_RS21610
NZ_CAAR01001274.1	Protein Homology	CDS	3880	7107	.	+	0	ID=cds-WP_001126321.1;Parent=gene-STY7866_RS21610;Dbxref=Genbank:WP_001126321.1;Name=WP_001126321.1;gbkey=CDS;gene=carB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454677.1;locus_tag=STY7866_RS21610;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126321.1;transl_table=11
NZ_CAAR01001274.1	RefSeq	gene	7381	7776	.	+	.	ID=gene-STY7866_RS21615;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=STY7866_RS21615
NZ_CAAR01001274.1	Protein Homology	CDS	7381	7776	.	+	0	ID=cds-WP_000333324.1;Parent=gene-STY7866_RS21615;Dbxref=Genbank:WP_000333324.1;Name=WP_000333324.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454678.1;locus_tag=STY7866_RS21615;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333324.1;transl_table=11
NZ_CAAR01001274.1	RefSeq	gene	7854	8450	.	-	.	ID=gene-STY7866_RS21620;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=STY7866_RS21620
NZ_CAAR01001274.1	Protein Homology	CDS	7854	8450	.	-	0	ID=cds-WP_000122863.1;Parent=gene-STY7866_RS21620;Dbxref=Genbank:WP_000122863.1;Name=WP_000122863.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454679.1;locus_tag=STY7866_RS21620;product=carnitine operon protein CaiE;protein_id=WP_000122863.1;transl_table=11
NZ_CAAR01001274.1	RefSeq	gene	8562	9347	.	-	.	ID=gene-STY7866_RS21625;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=STY7866_RS21625
NZ_CAAR01001274.1	Protein Homology	CDS	8562	9347	.	-	0	ID=cds-WP_000004377.1;Parent=gene-STY7866_RS21625;Dbxref=Genbank:WP_000004377.1;Name=WP_000004377.1;gbkey=CDS;gene=caiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454680.1;locus_tag=STY7866_RS21625;product=crotonobetainyl-CoA hydratase;protein_id=WP_000004377.1;transl_table=11
NZ_CAAR01001274.1	RefSeq	gene	9401	10954	.	-	.	ID=gene-STY7866_RS21630;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=STY7866_RS21630
NZ_CAAR01001274.1	Protein Homology	CDS	9401	10954	.	-	0	ID=cds-WP_000355790.1;Parent=gene-STY7866_RS21630;Dbxref=Genbank:WP_000355790.1;Name=WP_000355790.1;gbkey=CDS;gene=caiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454681.1;locus_tag=STY7866_RS21630;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_000355790.1;transl_table=11
NZ_CAAR01001274.1	RefSeq	gene	11017	12234	.	-	.	ID=gene-STY7866_RS21635;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=STY7866_RS21635
NZ_CAAR01001274.1	Protein Homology	CDS	11017	12234	.	-	0	ID=cds-WP_001016209.1;Parent=gene-STY7866_RS21635;Dbxref=Genbank:WP_001016209.1;Name=WP_001016209.1;gbkey=CDS;gene=caiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454682.1;locus_tag=STY7866_RS21635;product=L-carnitine CoA-transferase;protein_id=WP_001016209.1;transl_table=11
NZ_CAAR01001274.1	RefSeq	gene	12346	13488	.	-	.	ID=gene-STY7866_RS21640;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=STY7866_RS21640
NZ_CAAR01001274.1	Protein Homology	CDS	12346	13488	.	-	0	ID=cds-WP_000347135.1;Parent=gene-STY7866_RS21640;Dbxref=Genbank:WP_000347135.1;Name=WP_000347135.1;gbkey=CDS;gene=caiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=STY7866_RS21640;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347135.1;transl_table=11
NZ_CAAR01001274.1	RefSeq	pseudogene	13523	14014	.	-	.	ID=gene-STY7866_RS21645;Name=STY7866_RS21645;end_range=14014,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21645;partial=true;pseudo=true
NZ_CAAR01001274.1	Protein Homology	CDS	13523	14014	.	-	1	ID=cds-STY7866_RS21645;Parent=gene-STY7866_RS21645;Note=catalyzes the exchange of L-carnitine for gamma-butyrobetaine in carnitine metabolism%3B frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=14014,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454684.1;locus_tag=STY7866_RS21645;partial=true;product=L-carnitine/gamma-butyrobetaine antiporter;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001273.1 1 19282
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001273.1	RefSeq	region	1	19282	.	+	.	ID=NZ_CAAR01001273.1:1..19282;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001273.1	RefSeq	gene	49	2007	.	-	.	ID=gene-STY7866_RS21480;Name=STY7866_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21480
NZ_CAAR01001273.1	Protein Homology	CDS	49	2007	.	-	0	ID=cds-WP_000910350.1;Parent=gene-STY7866_RS21480;Dbxref=Genbank:WP_000910350.1;Name=WP_000910350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454953.1;locus_tag=STY7866_RS21480;product=site-specific DNA-methyltransferase;protein_id=WP_000910350.1;transl_table=11
NZ_CAAR01001273.1	RefSeq	gene	2196	3473	.	-	.	ID=gene-STY7866_RS21485;Name=STY7866_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21485
NZ_CAAR01001273.1	Protein Homology	CDS	2196	3473	.	-	0	ID=cds-WP_031626533.1;Parent=gene-STY7866_RS21485;Dbxref=Genbank:WP_031626533.1;Name=WP_031626533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454952.1;locus_tag=STY7866_RS21485;product=MFS transporter;protein_id=WP_031626533.1;transl_table=11
NZ_CAAR01001273.1	RefSeq	gene	3741	3935	.	-	.	ID=gene-STY7866_RS21495;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=STY7866_RS21495
NZ_CAAR01001273.1	Protein Homology	CDS	3741	3935	.	-	0	ID=cds-WP_001159469.1;Parent=gene-STY7866_RS21495;Dbxref=Genbank:WP_001159469.1;Name=WP_001159469.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991978.1;locus_tag=STY7866_RS21495;product=gold resistance metallochaperone GolB;protein_id=WP_001159469.1;transl_table=11
NZ_CAAR01001273.1	RefSeq	pseudogene	4065	4622	.	+	.	ID=gene-STY7866_RS21500;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=pseudogene;locus_tag=STY7866_RS21500;partial=true;pseudo=true;start_range=.,4065
NZ_CAAR01001273.1	Protein Homology	CDS	4065	4622	.	+	0	ID=cds-STY7866_RS21500;Parent=gene-STY7866_RS21500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=STY7866_RS21500;partial=true;product=multidrug efflux transporter outer membrane subunit MdsC;pseudo=true;start_range=.,4065;transl_table=11
NZ_CAAR01001273.1	RefSeq	gene	4692	5051	.	-	.	ID=gene-STY7866_RS21505;Name=STY7866_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21505
NZ_CAAR01001273.1	Protein Homology	CDS	4692	5051	.	-	0	ID=cds-WP_000722977.1;Parent=gene-STY7866_RS21505;Dbxref=Genbank:WP_000722977.1;Name=WP_000722977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454949.1;locus_tag=STY7866_RS21505;product=DUF4156 domain-containing protein;protein_id=WP_000722977.1;transl_table=11
NZ_CAAR01001273.1	RefSeq	gene	5109	5333	.	-	.	ID=gene-STY7866_RS21510;Name=STY7866_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21510
NZ_CAAR01001273.1	Protein Homology	CDS	5109	5333	.	-	0	ID=cds-WP_000737124.1;Parent=gene-STY7866_RS21510;Dbxref=Genbank:WP_000737124.1;Name=WP_000737124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=STY7866_RS21510;product=membrane protein;protein_id=WP_000737124.1;transl_table=11
NZ_CAAR01001273.1	RefSeq	gene	5344	5985	.	-	.	ID=gene-STY7866_RS21515;Name=STY7866_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21515
NZ_CAAR01001273.1	Protein Homology	CDS	5344	5985	.	-	0	ID=cds-WP_000610819.1;Parent=gene-STY7866_RS21515;Dbxref=Genbank:WP_000610819.1;Name=WP_000610819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=STY7866_RS21515;product=helix-turn-helix transcriptional regulator;protein_id=WP_000610819.1;transl_table=11
NZ_CAAR01001273.1	RefSeq	pseudogene	6131	6654	.	-	.	ID=gene-STY7866_RS21520;Name=STY7866_RS21520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21520;pseudo=true
NZ_CAAR01001273.1	Protein Homology	CDS	6131	6654	.	-	0	ID=cds-STY7866_RS21520;Parent=gene-STY7866_RS21520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454946.1;locus_tag=STY7866_RS21520;product=outer membrane beta-barrel protein;pseudo=true;transl_table=11
NZ_CAAR01001273.1	RefSeq	pseudogene	7056	7543	.	-	.	ID=gene-STY7866_RS21525;Name=STY7866_RS21525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21525;pseudo=true
NZ_CAAR01001273.1	Protein Homology	CDS	7056	7543	.	-	0	ID=cds-STY7866_RS21525;Parent=gene-STY7866_RS21525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=STY7866_RS21525;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01001273.1	RefSeq	pseudogene	7516	8260	.	-	.	ID=gene-STY7866_RS21530;Name=STY7866_RS21530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21530;pseudo=true
NZ_CAAR01001273.1	Protein Homology	CDS	7516	8260	.	-	0	ID=cds-STY7866_RS21530;Parent=gene-STY7866_RS21530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454944.1;locus_tag=STY7866_RS21530;product=response regulator;pseudo=true;transl_table=11
NZ_CAAR01001273.1	RefSeq	gene	8360	9934	.	-	.	ID=gene-STY7866_RS21535;Name=STY7866_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21535
NZ_CAAR01001273.1	Protein Homology	CDS	8360	9934	.	-	0	ID=cds-WP_000868284.1;Parent=gene-STY7866_RS21535;Dbxref=Genbank:WP_000868284.1;Name=WP_000868284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454943.1;locus_tag=STY7866_RS21535;product=cyclic diguanylate phosphodiesterase;protein_id=WP_000868284.1;transl_table=11
NZ_CAAR01001273.1	RefSeq	pseudogene	10446	10747	.	-	.	ID=gene-STY7866_RS29400;Name=STY7866_RS29400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29400;pseudo=true
NZ_CAAR01001273.1	Protein Homology	CDS	10446	10747	.	-	0	ID=cds-STY7866_RS29400;Parent=gene-STY7866_RS29400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=STY7866_RS29400;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01001273.1	RefSeq	gene	10720	11454	.	-	.	ID=gene-STY7866_RS21545;Name=STY7866_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21545
NZ_CAAR01001273.1	Protein Homology	CDS	10720	11454	.	-	0	ID=cds-WP_001005857.1;Parent=gene-STY7866_RS21545;Dbxref=Genbank:WP_001005857.1;Name=WP_001005857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454941.1;locus_tag=STY7866_RS21545;product=hypothetical protein;protein_id=WP_001005857.1;transl_table=11
NZ_CAAR01001273.1	RefSeq	gene	12117	12653	.	+	.	ID=gene-STY7866_RS21550;Name=STY7866_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21550
NZ_CAAR01001273.1	Protein Homology	CDS	12117	12653	.	+	0	ID=cds-WP_000062036.1;Parent=gene-STY7866_RS21550;Dbxref=Genbank:WP_000062036.1;Name=WP_000062036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454940.1;locus_tag=STY7866_RS21550;product=type 1 fimbrial protein;protein_id=WP_000062036.1;transl_table=11
NZ_CAAR01001273.1	RefSeq	gene	12715	13476	.	+	.	ID=gene-STY7866_RS21555;Name=STY7866_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21555
NZ_CAAR01001273.1	Protein Homology	CDS	12715	13476	.	+	0	ID=cds-WP_000781490.1;Parent=gene-STY7866_RS21555;Dbxref=Genbank:WP_000781490.1;Name=WP_000781490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454939.1;locus_tag=STY7866_RS21555;product=fimbrial chaperone;protein_id=WP_000781490.1;transl_table=11
NZ_CAAR01001273.1	RefSeq	gene	13460	16021	.	+	.	ID=gene-STY7866_RS21560;Name=STY7866_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21560
NZ_CAAR01001273.1	Protein Homology	CDS	13460	16021	.	+	0	ID=cds-WP_000075319.1;Parent=gene-STY7866_RS21560;Dbxref=Genbank:WP_000075319.1;Name=WP_000075319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454938.1;locus_tag=STY7866_RS21560;product=fimbrial outer membrane usher protein;protein_id=WP_000075319.1;transl_table=11
NZ_CAAR01001273.1	RefSeq	gene	16026	17351	.	+	.	ID=gene-STY7866_RS21565;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=STY7866_RS21565
NZ_CAAR01001273.1	Protein Homology	CDS	16026	17351	.	+	0	ID=cds-WP_000899085.1;Parent=gene-STY7866_RS21565;Dbxref=Genbank:WP_000899085.1;Name=WP_000899085.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454937.1;locus_tag=STY7866_RS21565;product=fimbrial usher protein StbD;protein_id=WP_000899085.1;transl_table=11
NZ_CAAR01001273.1	RefSeq	gene	17317	18075	.	+	.	ID=gene-STY7866_RS21570;Name=STY7866_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21570
NZ_CAAR01001273.1	Protein Homology	CDS	17317	18075	.	+	0	ID=cds-WP_001247037.1;Parent=gene-STY7866_RS21570;Dbxref=Genbank:WP_001247037.1;Name=WP_001247037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454936.1;locus_tag=STY7866_RS21570;product=fimbrial assembly chaperone;protein_id=WP_001247037.1;transl_table=11
NZ_CAAR01001273.1	RefSeq	gene	18123	18521	.	-	.	ID=gene-STY7866_RS21575;Name=STY7866_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21575
NZ_CAAR01001273.1	Protein Homology	CDS	18123	18521	.	-	0	ID=cds-WP_000766839.1;Parent=gene-STY7866_RS21575;Dbxref=Genbank:WP_000766839.1;Name=WP_000766839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=STY7866_RS21575;product=hypothetical protein;protein_id=WP_000766839.1;transl_table=11
NZ_CAAR01001273.1	RefSeq	gene	18745	18820	.	-	.	ID=gene-STY7866_RS21585;Name=STY7866_RS21585;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS21585
NZ_CAAR01001273.1	tRNAscan-SE	tRNA	18745	18820	.	-	.	ID=rna-STY7866_RS21585;Parent=gene-STY7866_RS21585;anticodon=(pos:complement(18785..18787));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS21585;product=tRNA-Thr
NZ_CAAR01001273.1	tRNAscan-SE	exon	18745	18820	.	-	.	ID=exon-STY7866_RS21585-1;Parent=rna-STY7866_RS21585;anticodon=(pos:complement(18785..18787));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS21585;product=tRNA-Thr
NZ_CAAR01001273.1	RefSeq	pseudogene	18936	19282	.	-	.	ID=gene-STY7866_RS21590;Name=STY7866_RS21590;end_range=19282,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21590;partial=true;pseudo=true
NZ_CAAR01001273.1	Protein Homology	CDS	18936	19282	.	-	2	ID=cds-STY7866_RS21590;Parent=gene-STY7866_RS21590;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=19282,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454934.1;locus_tag=STY7866_RS21590;partial=true;product=gamma-glutamyl-phosphate reductase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001272.1 1 28333
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001272.1	RefSeq	region	1	28333	.	+	.	ID=NZ_CAAR01001272.1:1..28333;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001272.1	RefSeq	pseudogene	1	343	.	-	.	ID=gene-STY7866_RS29395;Name=STY7866_RS29395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29395;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001272.1	Protein Homology	CDS	1	343	.	-	0	ID=cds-STY7866_RS29395;Parent=gene-STY7866_RS29395;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456199.1;locus_tag=STY7866_RS29395;partial=true;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	426	746	.	-	.	ID=gene-STY7866_RS21330;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=STY7866_RS21330
NZ_CAAR01001272.1	Protein Homology	CDS	426	746	.	-	0	ID=cds-WP_000412164.1;Parent=gene-STY7866_RS21330;Dbxref=Genbank:WP_000412164.1;Name=WP_000412164.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456200.1;locus_tag=STY7866_RS21330;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412164.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	1047	1388	.	-	.	ID=gene-STY7866_RS21335;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=STY7866_RS21335
NZ_CAAR01001272.1	Protein Homology	CDS	1047	1388	.	-	0	ID=cds-WP_001039301.1;Parent=gene-STY7866_RS21335;Dbxref=Genbank:WP_001039301.1;Name=WP_001039301.1;gbkey=CDS;gene=osmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456201.1;locus_tag=STY7866_RS21335;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039301.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	1607	2434	.	+	.	ID=gene-STY7866_RS21340;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=STY7866_RS21340
NZ_CAAR01001272.1	Protein Homology	CDS	1607	2434	.	+	0	ID=cds-WP_000174989.1;Parent=gene-STY7866_RS21340;Dbxref=Genbank:WP_000174989.1;Name=WP_000174989.1;gbkey=CDS;gene=nadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456202.1;locus_tag=STY7866_RS21340;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000174989.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	2528	3436	.	+	.	ID=gene-STY7866_RS21345;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=STY7866_RS21345
NZ_CAAR01001272.1	Protein Homology	CDS	2528	3436	.	+	0	ID=cds-WP_001064670.1;Parent=gene-STY7866_RS21345;Dbxref=Genbank:WP_001064670.1;Name=WP_001064670.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456203.1;locus_tag=STY7866_RS21345;product=excinuclease Cho;protein_id=WP_001064670.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	3511	3996	.	-	.	ID=gene-STY7866_RS21350;Name=STY7866_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21350
NZ_CAAR01001272.1	Protein Homology	CDS	3511	3996	.	-	0	ID=cds-WP_001228995.1;Parent=gene-STY7866_RS21350;Dbxref=Genbank:WP_001228995.1;Name=WP_001228995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456204.1;locus_tag=STY7866_RS21350;product=ATP-independent periplasmic protein-refolding chaperone;protein_id=WP_001228995.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	4332	5300	.	-	.	ID=gene-STY7866_RS21355;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=STY7866_RS21355
NZ_CAAR01001272.1	Protein Homology	CDS	4332	5300	.	-	0	ID=cds-WP_000368452.1;Parent=gene-STY7866_RS21355;Dbxref=Genbank:WP_000368452.1;Name=WP_000368452.1;gbkey=CDS;gene=astE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456205.1;locus_tag=STY7866_RS21355;product=succinylglutamate desuccinylase;protein_id=WP_000368452.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	5293	6636	.	-	.	ID=gene-STY7866_RS21360;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=STY7866_RS21360
NZ_CAAR01001272.1	Protein Homology	CDS	5293	6636	.	-	0	ID=cds-WP_000123947.1;Parent=gene-STY7866_RS21360;Dbxref=Genbank:WP_000123947.1;Name=WP_000123947.1;gbkey=CDS;gene=astB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456206.1;locus_tag=STY7866_RS21360;product=N-succinylarginine dihydrolase;protein_id=WP_000123947.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	pseudogene	6633	8111	.	-	.	ID=gene-STY7866_RS21365;Name=astD;gbkey=Gene;gene=astD;gene_biotype=pseudogene;locus_tag=STY7866_RS21365;pseudo=true
NZ_CAAR01001272.1	Protein Homology	CDS	6633	8111	.	-	0	ID=cds-STY7866_RS21365;Parent=gene-STY7866_RS21365;Note=internal stop;gbkey=CDS;gene=astD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=STY7866_RS21365;product=succinylglutamate-semialdehyde dehydrogenase;pseudo=true;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	8108	9142	.	-	.	ID=gene-STY7866_RS21370;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=STY7866_RS21370
NZ_CAAR01001272.1	Protein Homology	CDS	8108	9142	.	-	0	ID=cds-WP_001263882.1;Parent=gene-STY7866_RS21370;Dbxref=Genbank:WP_001263882.1;Name=WP_001263882.1;gbkey=CDS;gene=astA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456208.1;locus_tag=STY7866_RS21370;product=arginine N-succinyltransferase;protein_id=WP_001263882.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	9133	10359	.	-	.	ID=gene-STY7866_RS21375;Name=STY7866_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21375
NZ_CAAR01001272.1	Protein Homology	CDS	9133	10359	.	-	0	ID=cds-WP_000059512.1;Parent=gene-STY7866_RS21375;Dbxref=Genbank:WP_000059512.1;Name=WP_000059512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456209.1;locus_tag=STY7866_RS21375;product=aspartate aminotransferase family protein;protein_id=WP_000059512.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	10805	11611	.	+	.	ID=gene-STY7866_RS21380;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=STY7866_RS21380
NZ_CAAR01001272.1	Protein Homology	CDS	10805	11611	.	+	0	ID=cds-WP_000673954.1;Parent=gene-STY7866_RS21380;Dbxref=Genbank:WP_000673954.1;Name=WP_000673954.1;gbkey=CDS;gene=xthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456210.1;locus_tag=STY7866_RS21380;product=exodeoxyribonuclease III;protein_id=WP_000673954.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	11684	12100	.	+	.	ID=gene-STY7866_RS21385;Name=STY7866_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21385
NZ_CAAR01001272.1	Protein Homology	CDS	11684	12100	.	+	0	ID=cds-WP_000592145.1;Parent=gene-STY7866_RS21385;Dbxref=Genbank:WP_000592145.1;Name=WP_000592145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456211.1;locus_tag=STY7866_RS21385;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_000592145.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	12060	12335	.	-	.	ID=gene-STY7866_RS21390;Name=STY7866_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21390
NZ_CAAR01001272.1	Protein Homology	CDS	12060	12335	.	-	0	ID=cds-WP_001254672.1;Parent=gene-STY7866_RS21390;Dbxref=Genbank:WP_001254672.1;Name=WP_001254672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456212.1;locus_tag=STY7866_RS21390;product=YnjH family protein;protein_id=WP_001254672.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	12573	13916	.	+	.	ID=gene-STY7866_RS21395;Name=STY7866_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21395
NZ_CAAR01001272.1	Protein Homology	CDS	12573	13916	.	+	0	ID=cds-WP_000372866.1;Parent=gene-STY7866_RS21395;Dbxref=Genbank:WP_000372866.1;Name=WP_000372866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013366584.1;locus_tag=STY7866_RS21395;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000372866.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	13946	15895	.	-	.	ID=gene-STY7866_RS21400;Name=STY7866_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21400
NZ_CAAR01001272.1	Protein Homology	CDS	13946	15895	.	-	0	ID=cds-WP_001235869.1;Parent=gene-STY7866_RS21400;Dbxref=Genbank:WP_001235869.1;Name=WP_001235869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456214.1;locus_tag=STY7866_RS21400;product=DNA topoisomerase III;protein_id=WP_001235869.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	15900	16943	.	-	.	ID=gene-STY7866_RS21405;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=STY7866_RS21405
NZ_CAAR01001272.1	Protein Homology	CDS	15900	16943	.	-	0	ID=cds-WP_000043069.1;Parent=gene-STY7866_RS21405;Dbxref=Genbank:WP_000043069.1;Name=WP_000043069.1;gbkey=CDS;gene=selD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456215.1;locus_tag=STY7866_RS21405;product=selenide%2C water dikinase SelD;protein_id=WP_000043069.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	pseudogene	17061	17613	.	-	.	ID=gene-STY7866_RS21410;Name=STY7866_RS21410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21410;pseudo=true
NZ_CAAR01001272.1	Protein Homology	CDS	17061	17613	.	-	0	ID=cds-STY7866_RS21410;Parent=gene-STY7866_RS21410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456216.1;locus_tag=STY7866_RS21410;product=NAD(P)H nitroreductase;pseudo=true;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	17787	19643	.	+	.	ID=gene-STY7866_RS21415;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=STY7866_RS21415
NZ_CAAR01001272.1	Protein Homology	CDS	17787	19643	.	+	0	ID=cds-WP_001259874.1;Parent=gene-STY7866_RS21415;Dbxref=Genbank:WP_001259874.1;Name=WP_001259874.1;gbkey=CDS;gene=sppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456217.1;locus_tag=STY7866_RS21415;product=signal peptide peptidase SppA;protein_id=WP_001259874.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	pseudogene	19739	20754	.	+	.	ID=gene-STY7866_RS21420;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=pseudogene;locus_tag=STY7866_RS21420;pseudo=true
NZ_CAAR01001272.1	Protein Homology	CDS	19739	20754	.	+	0	ID=cds-STY7866_RS21420;Parent=gene-STY7866_RS21420;Note=frameshifted;gbkey=CDS;gene=ansA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456218.1;locus_tag=STY7866_RS21420;product=asparaginase;pseudo=true;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	20781	21437	.	+	.	ID=gene-STY7866_RS21425;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=STY7866_RS21425
NZ_CAAR01001272.1	Protein Homology	CDS	20781	21437	.	+	0	ID=cds-WP_000184700.1;Parent=gene-STY7866_RS21425;Dbxref=Genbank:WP_000184700.1;Name=WP_000184700.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456219.1;locus_tag=STY7866_RS21425;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_000184700.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	21788	22066	.	-	.	ID=gene-STY7866_RS21430;Name=STY7866_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21430
NZ_CAAR01001272.1	Protein Homology	CDS	21788	22066	.	-	0	ID=cds-WP_001046864.1;Parent=gene-STY7866_RS21430;Dbxref=Genbank:WP_001046864.1;Name=WP_001046864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456220.1;locus_tag=STY7866_RS21430;product=YeaC family protein;protein_id=WP_001046864.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	22108	22551	.	-	.	ID=gene-STY7866_RS21435;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=STY7866_RS21435
NZ_CAAR01001272.1	Protein Homology	CDS	22108	22551	.	-	0	ID=cds-WP_000102941.1;Parent=gene-STY7866_RS21435;Dbxref=Genbank:WP_000102941.1;Name=WP_000102941.1;gbkey=CDS;gene=msrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456221.1;locus_tag=STY7866_RS21435;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_000102941.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	22863	23858	.	+	.	ID=gene-STY7866_RS21440;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=STY7866_RS21440
NZ_CAAR01001272.1	Protein Homology	CDS	22863	23858	.	+	0	ID=cds-WP_000153505.1;Parent=gene-STY7866_RS21440;Dbxref=Genbank:WP_000153505.1;Name=WP_000153505.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456222.1;locus_tag=STY7866_RS21440;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153505.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	24187	24336	.	+	.	ID=gene-STY7866_RS21450;Name=STY7866_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21450
NZ_CAAR01001272.1	Protein Homology	CDS	24187	24336	.	+	0	ID=cds-WP_000608648.1;Parent=gene-STY7866_RS21450;Dbxref=Genbank:WP_000608648.1;Name=WP_000608648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000608648.1;locus_tag=STY7866_RS21450;product=hypothetical protein;protein_id=WP_000608648.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	24361	25071	.	+	.	ID=gene-STY7866_RS21455;Name=STY7866_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21455
NZ_CAAR01001272.1	Protein Homology	CDS	24361	25071	.	+	0	ID=cds-WP_000266745.1;Parent=gene-STY7866_RS21455;Dbxref=Genbank:WP_000266745.1;Name=WP_000266745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000266745.1;locus_tag=STY7866_RS21455;product=D-hexose-6-phosphate mutarotase;protein_id=WP_000266745.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	25170	26027	.	-	.	ID=gene-STY7866_RS21460;Name=STY7866_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21460
NZ_CAAR01001272.1	Protein Homology	CDS	25170	26027	.	-	0	ID=cds-WP_000843742.1;Parent=gene-STY7866_RS21460;Dbxref=Genbank:WP_000843742.1;Name=WP_000843742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456223.1;locus_tag=STY7866_RS21460;product=aldo/keto reductase;protein_id=WP_000843742.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	26125	27321	.	-	.	ID=gene-STY7866_RS21465;Name=STY7866_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21465
NZ_CAAR01001272.1	Protein Homology	CDS	26125	27321	.	-	0	ID=cds-WP_000029244.1;Parent=gene-STY7866_RS21465;Dbxref=Genbank:WP_000029244.1;Name=WP_000029244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456224.1;locus_tag=STY7866_RS21465;product=anaerobic sulfatase maturase;protein_id=WP_000029244.1;transl_table=11
NZ_CAAR01001272.1	RefSeq	gene	27611	28333	.	-	.	ID=gene-STY7866_RS21475;Name=STY7866_RS21475;end_range=28333,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21475;partial=true
NZ_CAAR01001272.1	Protein Homology	CDS	27611	28333	.	-	0	ID=cds-WP_000652888.1;Parent=gene-STY7866_RS21475;Dbxref=Genbank:WP_000652888.1;Name=WP_000652888.1;end_range=28333,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456225.1;locus_tag=STY7866_RS21475;partial=true;product=MipA/OmpV family protein;protein_id=WP_000652888.1;transl_table=11
##sequence-region NZ_CAAR01001271.1 1 5552
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001271.1	RefSeq	region	1	5552	.	+	.	ID=NZ_CAAR01001271.1:1..5552;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001271.1	RefSeq	pseudogene	1	328	.	+	.	ID=gene-STY7866_RS21280;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=pseudogene;locus_tag=STY7866_RS21280;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001271.1	Protein Homology	CDS	1	328	.	+	1	ID=cds-STY7866_RS21280;Parent=gene-STY7866_RS21280;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=STY7866_RS21280;partial=true;product=peptide ABC transporter permease SapB;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001271.1	RefSeq	pseudogene	478	839	.	-	.	ID=gene-STY7866_RS21290;Name=STY7866_RS21290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21290;pseudo=true
NZ_CAAR01001271.1	Protein Homology	CDS	478	839	.	-	0	ID=cds-STY7866_RS21290;Parent=gene-STY7866_RS21290;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210125.1;locus_tag=STY7866_RS21290;product=recombinase family protein;pseudo=true;transl_table=11
NZ_CAAR01001271.1	RefSeq	pseudogene	1139	1234	.	-	.	ID=gene-STY7866_RS29365;Name=STY7866_RS29365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29365;partial=true;pseudo=true;start_range=.,1139
NZ_CAAR01001271.1	Protein Homology	CDS	1139	1234	.	-	0	ID=cds-STY7866_RS29365;Parent=gene-STY7866_RS29365;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001406273.1;locus_tag=STY7866_RS29365;partial=true;product=holin;pseudo=true;start_range=.,1139;transl_table=11
NZ_CAAR01001271.1	RefSeq	gene	1293	1718	.	-	.	ID=gene-STY7866_RS21295;Name=STY7866_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21295
NZ_CAAR01001271.1	Protein Homology	CDS	1293	1718	.	-	0	ID=cds-WP_000727926.1;Parent=gene-STY7866_RS21295;Dbxref=Genbank:WP_000727926.1;Name=WP_000727926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000727929.1;locus_tag=STY7866_RS21295;product=peptidase;protein_id=WP_000727926.1;transl_table=11
NZ_CAAR01001271.1	RefSeq	gene	1645	1944	.	-	.	ID=gene-STY7866_RS29370;Name=STY7866_RS29370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29370
NZ_CAAR01001271.1	Protein Homology	CDS	1645	1944	.	-	0	ID=cds-WP_071525146.1;Parent=gene-STY7866_RS29370;Dbxref=Genbank:WP_071525146.1;Name=WP_071525146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001640522.1;locus_tag=STY7866_RS29370;product=pertussis toxin subunit;protein_id=WP_071525146.1;transl_table=11
NZ_CAAR01001271.1	RefSeq	gene	1983	2123	.	-	.	ID=gene-STY7866_RS29375;Name=STY7866_RS29375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29375
NZ_CAAR01001271.1	Protein Homology	CDS	1983	2123	.	-	0	ID=cds-WP_071525147.1;Parent=gene-STY7866_RS29375;Dbxref=Genbank:WP_071525147.1;Name=WP_071525147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001605117.1;locus_tag=STY7866_RS29375;product=pertussis toxin subunit;protein_id=WP_071525147.1;transl_table=11
NZ_CAAR01001271.1	RefSeq	gene	2477	2746	.	-	.	ID=gene-STY7866_RS29380;Name=STY7866_RS29380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29380
NZ_CAAR01001271.1	Protein Homology	CDS	2477	2746	.	-	0	ID=cds-WP_001766201.1;Parent=gene-STY7866_RS29380;Dbxref=Genbank:WP_001766201.1;Name=WP_001766201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766201.1;locus_tag=STY7866_RS29380;product=hypothetical protein;protein_id=WP_001766201.1;transl_table=11
NZ_CAAR01001271.1	RefSeq	pseudogene	3082	3537	.	+	.	ID=gene-STY7866_RS21305;Name=STY7866_RS21305;end_range=3537,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21305;partial=true;pseudo=true
NZ_CAAR01001271.1	Protein Homology	CDS	3082	3537	.	+	0	ID=cds-STY7866_RS21305;Parent=gene-STY7866_RS21305;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3537,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000977501.1;locus_tag=STY7866_RS21305;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01001271.1	RefSeq	pseudogene	3662	3905	.	-	.	ID=gene-STY7866_RS29385;Name=STY7866_RS29385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29385;pseudo=true
NZ_CAAR01001271.1	Protein Homology	CDS	3662	3905	.	-	0	ID=cds-STY7866_RS29385;Parent=gene-STY7866_RS29385;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455507.1;locus_tag=STY7866_RS29385;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01001271.1	RefSeq	gene	3850	4251	.	-	.	ID=gene-STY7866_RS29390;Name=STY7866_RS29390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29390
NZ_CAAR01001271.1	Protein Homology	CDS	3850	4251	.	-	0	ID=cds-WP_001766202.1;Parent=gene-STY7866_RS29390;Dbxref=Genbank:WP_001766202.1;Name=WP_001766202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543117.1;locus_tag=STY7866_RS29390;product=DUF4102 domain-containing protein;protein_id=WP_001766202.1;transl_table=11
NZ_CAAR01001271.1	RefSeq	gene	4386	5276	.	+	.	ID=gene-STY7866_RS21315;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=STY7866_RS21315
NZ_CAAR01001271.1	Protein Homology	CDS	4386	5276	.	+	0	ID=cds-WP_001146150.1;Parent=gene-STY7866_RS21315;Dbxref=Genbank:WP_001146150.1;Name=WP_001146150.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455802.1;locus_tag=STY7866_RS21315;product=peptide ABC transporter permease SapC;protein_id=WP_001146150.1;transl_table=11
NZ_CAAR01001271.1	RefSeq	pseudogene	5276	5552	.	+	.	ID=gene-STY7866_RS21320;Name=sapD;end_range=5552,.;gbkey=Gene;gene=sapD;gene_biotype=pseudogene;locus_tag=STY7866_RS21320;partial=true;pseudo=true
NZ_CAAR01001271.1	Protein Homology	CDS	5276	5552	.	+	0	ID=cds-STY7866_RS21320;Parent=gene-STY7866_RS21320;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5552,.;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455801.1;locus_tag=STY7866_RS21320;partial=true;product=peptide ABC transporter ATP-binding protein SapD;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001270.1 1 16903
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001270.1	RefSeq	region	1	16903	.	+	.	ID=NZ_CAAR01001270.1:1..16903;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001270.1	RefSeq	gene	76	2124	.	+	.	ID=gene-STY7866_RS21180;Name=STY7866_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21180
NZ_CAAR01001270.1	Protein Homology	CDS	76	2124	.	+	0	ID=cds-WP_001091235.1;Parent=gene-STY7866_RS21180;Dbxref=Genbank:WP_001091235.1;Name=WP_001091235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456350.1;locus_tag=STY7866_RS21180;product=carboxy terminal-processing peptidase;protein_id=WP_001091235.1;transl_table=11
NZ_CAAR01001270.1	RefSeq	pseudogene	2317	3196	.	+	.	ID=gene-STY7866_RS21185;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=pseudogene;locus_tag=STY7866_RS21185;pseudo=true
NZ_CAAR01001270.1	Protein Homology	CDS	2317	3196	.	+	0	ID=cds-STY7866_RS21185;Parent=gene-STY7866_RS21185;Note=frameshifted;gbkey=CDS;gene=htpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=STY7866_RS21185;product=protease HtpX;pseudo=true;transl_table=11
NZ_CAAR01001270.1	RefSeq	gene	3244	4593	.	-	.	ID=gene-STY7866_RS21190;Name=STY7866_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21190
NZ_CAAR01001270.1	Protein Homology	CDS	3244	4593	.	-	0	ID=cds-WP_149143416.1;Parent=gene-STY7866_RS21190;Dbxref=Genbank:WP_149143416.1;Name=WP_149143416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416342.4;locus_tag=STY7866_RS21190;product=MFS transporter;protein_id=WP_149143416.1;transl_table=11
NZ_CAAR01001270.1	RefSeq	gene	4792	5583	.	+	.	ID=gene-STY7866_RS21195;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=STY7866_RS21195
NZ_CAAR01001270.1	Protein Homology	CDS	4792	5583	.	+	0	ID=cds-WP_001262197.1;Parent=gene-STY7866_RS21195;Dbxref=Genbank:WP_001262197.1;Name=WP_001262197.1;gbkey=CDS;gene=kdgR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132042.1;locus_tag=STY7866_RS21195;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262197.1;transl_table=11
NZ_CAAR01001270.1	RefSeq	gene	5795	6034	.	-	.	ID=gene-STY7866_RS21205;Name=STY7866_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21205
NZ_CAAR01001270.1	Protein Homology	CDS	5795	6034	.	-	0	ID=cds-WP_001236777.1;Parent=gene-STY7866_RS21205;Dbxref=Genbank:WP_001236777.1;Name=WP_001236777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=STY7866_RS21205;product=hypothetical protein;protein_id=WP_001236777.1;transl_table=11
NZ_CAAR01001270.1	RefSeq	gene	6187	6330	.	+	.	ID=gene-STY7866_RS21210;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=STY7866_RS21210
NZ_CAAR01001270.1	Protein Homology	CDS	6187	6330	.	+	0	ID=cds-WP_000714547.1;Parent=gene-STY7866_RS21210;Dbxref=Genbank:WP_000714547.1;Name=WP_000714547.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456346.1;locus_tag=STY7866_RS21210;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714547.1;transl_table=11
NZ_CAAR01001270.1	RefSeq	gene	6401	6688	.	+	.	ID=gene-STY7866_RS21215;Name=STY7866_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21215
NZ_CAAR01001270.1	Protein Homology	CDS	6401	6688	.	+	0	ID=cds-WP_001000660.1;Parent=gene-STY7866_RS21215;Dbxref=Genbank:WP_001000660.1;Name=WP_001000660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456345.1;locus_tag=STY7866_RS21215;product=hypothetical protein;protein_id=WP_001000660.1;transl_table=11
NZ_CAAR01001270.1	RefSeq	gene	7337	7480	.	+	.	ID=gene-STY7866_RS21220;Name=STY7866_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21220
NZ_CAAR01001270.1	Protein Homology	CDS	7337	7480	.	+	0	ID=cds-WP_001537930.1;Parent=gene-STY7866_RS21220;Dbxref=Genbank:WP_001537930.1;Name=WP_001537930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=STY7866_RS21220;product=YobF family protein;protein_id=WP_001537930.1;transl_table=11
NZ_CAAR01001270.1	RefSeq	gene	7493	7702	.	+	.	ID=gene-STY7866_RS21225;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=STY7866_RS21225
NZ_CAAR01001270.1	Protein Homology	CDS	7493	7702	.	+	0	ID=cds-WP_001062678.1;Parent=gene-STY7866_RS21225;Dbxref=Genbank:WP_001062678.1;Name=WP_001062678.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=STY7866_RS21225;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11
NZ_CAAR01001270.1	RefSeq	gene	7922	9667	.	+	.	ID=gene-STY7866_RS21230;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=STY7866_RS21230
NZ_CAAR01001270.1	Protein Homology	CDS	7922	9667	.	+	0	ID=cds-WP_000730322.1;Parent=gene-STY7866_RS21230;Dbxref=Genbank:WP_000730322.1;Name=WP_000730322.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456342.1;locus_tag=STY7866_RS21230;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000730322.1;transl_table=11
NZ_CAAR01001270.1	RefSeq	gene	9733	10542	.	+	.	ID=gene-STY7866_RS21235;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=STY7866_RS21235
NZ_CAAR01001270.1	Protein Homology	CDS	9733	10542	.	+	0	ID=cds-WP_000010934.1;Parent=gene-STY7866_RS21235;Dbxref=Genbank:WP_000010934.1;Name=WP_000010934.1;gbkey=CDS;gene=rlmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456341.1;locus_tag=STY7866_RS21235;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010934.1;transl_table=11
NZ_CAAR01001270.1	RefSeq	gene	10539	11105	.	-	.	ID=gene-STY7866_RS21240;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=STY7866_RS21240
NZ_CAAR01001270.1	Protein Homology	CDS	10539	11105	.	-	0	ID=cds-WP_001518359.1;Parent=gene-STY7866_RS21240;Dbxref=Genbank:WP_001518359.1;Name=WP_001518359.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=STY7866_RS21240;product=manganese efflux pump MntP;protein_id=WP_001518359.1;transl_table=11
NZ_CAAR01001270.1	RefSeq	gene	11515	11973	.	-	.	ID=gene-STY7866_RS21245;Name=STY7866_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21245
NZ_CAAR01001270.1	Protein Homology	CDS	11515	11973	.	-	0	ID=cds-WP_000156273.1;Parent=gene-STY7866_RS21245;Dbxref=Genbank:WP_000156273.1;Name=WP_000156273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456339.1;locus_tag=STY7866_RS21245;product=DUF986 domain-containing protein;protein_id=WP_000156273.1;transl_table=11
NZ_CAAR01001270.1	RefSeq	gene	12032	12883	.	-	.	ID=gene-STY7866_RS21250;Name=STY7866_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21250
NZ_CAAR01001270.1	Protein Homology	CDS	12032	12883	.	-	0	ID=cds-WP_001518647.1;Parent=gene-STY7866_RS21250;Dbxref=Genbank:WP_001518647.1;Name=WP_001518647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456338.3;locus_tag=STY7866_RS21250;product=PTS mannose transporter subunit IID;protein_id=WP_001518647.1;transl_table=11
NZ_CAAR01001270.1	RefSeq	gene	12896	13696	.	-	.	ID=gene-STY7866_RS21255;Name=STY7866_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21255
NZ_CAAR01001270.1	Protein Homology	CDS	12896	13696	.	-	0	ID=cds-WP_000406918.1;Parent=gene-STY7866_RS21255;Dbxref=Genbank:WP_000406918.1;Name=WP_000406918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=STY7866_RS21255;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=WP_000406918.1;transl_table=11
NZ_CAAR01001270.1	RefSeq	gene	13749	14717	.	-	.	ID=gene-STY7866_RS21260;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=STY7866_RS21260
NZ_CAAR01001270.1	Protein Homology	CDS	13749	14717	.	-	0	ID=cds-WP_000150523.1;Parent=gene-STY7866_RS21260;Dbxref=Genbank:WP_000150523.1;Name=WP_000150523.1;gbkey=CDS;gene=manX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456336.1;locus_tag=STY7866_RS21260;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150523.1;transl_table=11
NZ_CAAR01001270.1	RefSeq	gene	15190	16749	.	+	.	ID=gene-STY7866_RS21270;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=STY7866_RS21270
NZ_CAAR01001270.1	Protein Homology	CDS	15190	16749	.	+	0	ID=cds-WP_000421821.1;Parent=gene-STY7866_RS21270;Dbxref=Genbank:WP_000421821.1;Name=WP_000421821.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456335.1;locus_tag=STY7866_RS21270;product=CNNM family cation transport protein YoaE;protein_id=WP_000421821.1;transl_table=11
NZ_CAAR01001270.1	RefSeq	gene	16771	16903	.	-	.	ID=gene-STY7866_RS29360;Name=STY7866_RS29360;end_range=16903,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29360;partial=true
NZ_CAAR01001270.1	Protein Homology	CDS	16771	16903	.	-	1	ID=cds-WP_000324758.1;Parent=gene-STY7866_RS29360;Dbxref=Genbank:WP_000324758.1;Name=WP_000324758.1;end_range=16903,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456334.1;locus_tag=STY7866_RS29360;partial=true;product=hypothetical protein;protein_id=WP_000324758.1;transl_table=11
##sequence-region NZ_CAAR01001269.1 1 9478
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001269.1	RefSeq	region	1	9478	.	+	.	ID=NZ_CAAR01001269.1:1..9478;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001269.1	RefSeq	pseudogene	1	584	.	+	.	ID=gene-STY7866_RS21135;Name=STY7866_RS21135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21135;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001269.1	Protein Homology	CDS	1	584	.	+	2	ID=cds-STY7866_RS21135;Parent=gene-STY7866_RS21135;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=STY7866_RS21135;partial=true;product=alpha%2Calpha-trehalase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001269.1	RefSeq	gene	647	901	.	-	.	ID=gene-STY7866_RS21140;Name=STY7866_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21140
NZ_CAAR01001269.1	Protein Homology	CDS	647	901	.	-	0	ID=cds-WP_000511323.1;Parent=gene-STY7866_RS21140;Dbxref=Genbank:WP_000511323.1;Name=WP_000511323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456304.1;locus_tag=STY7866_RS21140;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511323.1;transl_table=11
NZ_CAAR01001269.1	RefSeq	gene	1070	1804	.	+	.	ID=gene-STY7866_RS21145;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=STY7866_RS21145
NZ_CAAR01001269.1	Protein Homology	CDS	1070	1804	.	+	0	ID=cds-WP_000017410.1;Parent=gene-STY7866_RS21145;Dbxref=Genbank:WP_000017410.1;Name=WP_000017410.1;gbkey=CDS;gene=ycgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456305.1;locus_tag=STY7866_RS21145;product=flagellar brake protein YcgR;protein_id=WP_000017410.1;transl_table=11
NZ_CAAR01001269.1	RefSeq	gene	1818	2429	.	-	.	ID=gene-STY7866_RS21150;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=STY7866_RS21150
NZ_CAAR01001269.1	Protein Homology	CDS	1818	2429	.	-	0	ID=cds-WP_000776974.1;Parent=gene-STY7866_RS21150;Dbxref=Genbank:WP_000776974.1;Name=WP_000776974.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456306.1;locus_tag=STY7866_RS21150;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_000776974.1;transl_table=11
NZ_CAAR01001269.1	RefSeq	gene	2600	3514	.	+	.	ID=gene-STY7866_RS21155;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=STY7866_RS21155
NZ_CAAR01001269.1	Protein Homology	CDS	2600	3514	.	+	0	ID=cds-WP_000051613.1;Parent=gene-STY7866_RS21155;Dbxref=Genbank:WP_000051613.1;Name=WP_000051613.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456307.1;locus_tag=STY7866_RS21155;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_000051613.1;transl_table=11
NZ_CAAR01001269.1	RefSeq	pseudogene	3611	5343	.	+	.	ID=gene-STY7866_RS21160;Name=STY7866_RS21160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21160;pseudo=true
NZ_CAAR01001269.1	Protein Homology	CDS	3611	5343	.	+	0	ID=cds-STY7866_RS21160;Parent=gene-STY7866_RS21160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456308.1;locus_tag=STY7866_RS21160;product=potassium/proton antiporter;pseudo=true;transl_table=11
NZ_CAAR01001269.1	RefSeq	gene	5405	6475	.	-	.	ID=gene-STY7866_RS21165;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=STY7866_RS21165
NZ_CAAR01001269.1	Protein Homology	CDS	5405	6475	.	-	0	ID=cds-WP_000197904.1;Parent=gene-STY7866_RS21165;Dbxref=Genbank:WP_000197904.1;Name=WP_000197904.1;gbkey=CDS;gene=dadX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456309.1;locus_tag=STY7866_RS21165;product=catabolic alanine racemase DadX;protein_id=WP_000197904.1;transl_table=11
NZ_CAAR01001269.1	RefSeq	gene	6489	7787	.	-	.	ID=gene-STY7866_RS21170;Name=STY7866_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21170
NZ_CAAR01001269.1	Protein Homology	CDS	6489	7787	.	-	0	ID=cds-WP_001266934.1;Parent=gene-STY7866_RS21170;Dbxref=Genbank:WP_001266934.1;Name=WP_001266934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456310.1;locus_tag=STY7866_RS21170;product=D-amino acid dehydrogenase;protein_id=WP_001266934.1;transl_table=11
NZ_CAAR01001269.1	RefSeq	gene	8110	9478	.	+	.	ID=gene-STY7866_RS21175;Name=STY7866_RS21175;end_range=9478,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21175;partial=true
NZ_CAAR01001269.1	Protein Homology	CDS	8110	9478	.	+	0	ID=cds-WP_001240761.1;Parent=gene-STY7866_RS21175;Dbxref=Genbank:WP_001240761.1;Name=WP_001240761.1;end_range=9478,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456311.1;locus_tag=STY7866_RS21175;partial=true;product=SpoVR family protein;protein_id=WP_001240761.1;transl_table=11
##sequence-region NZ_CAAR01001268.1 1 468
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001268.1	RefSeq	region	1	468	.	+	.	ID=NZ_CAAR01001268.1:1..468;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001268.1	RefSeq	pseudogene	1	468	.	-	.	ID=gene-STY7866_RS21130;Name=STY7866_RS21130;end_range=468,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21130;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001268.1	Protein Homology	CDS	1	468	.	-	0	ID=cds-STY7866_RS21130;Parent=gene-STY7866_RS21130;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=468,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=STY7866_RS21130;partial=true;product=AraC family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001267.1 1 120
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001267.1	RefSeq	region	1	120	.	+	.	ID=NZ_CAAR01001267.1:1..120;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001266.1 1 1275
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001266.1	RefSeq	region	1	1275	.	+	.	ID=NZ_CAAR01001266.1:1..1275;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001266.1	RefSeq	gene	447	881	.	+	.	ID=gene-STY7866_RS21120;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=STY7866_RS21120
NZ_CAAR01001266.1	Protein Homology	CDS	447	881	.	+	0	ID=cds-WP_001082296.1;Parent=gene-STY7866_RS21120;Dbxref=Genbank:WP_001082296.1;Name=WP_001082296.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455852.1;locus_tag=STY7866_RS21120;product=universal stress protein UspF;protein_id=WP_001082296.1;transl_table=11
NZ_CAAR01001266.1	RefSeq	gene	934	1272	.	-	.	ID=gene-STY7866_RS21125;Name=STY7866_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21125
NZ_CAAR01001266.1	Protein Homology	CDS	934	1272	.	-	0	ID=cds-WP_000159242.1;Parent=gene-STY7866_RS21125;Dbxref=Genbank:WP_000159242.1;Name=WP_000159242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455851.1;locus_tag=STY7866_RS21125;product=EamA family transporter;protein_id=WP_000159242.1;transl_table=11
##sequence-region NZ_CAAR01001265.1 1 776
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001265.1	RefSeq	region	1	776	.	+	.	ID=NZ_CAAR01001265.1:1..776;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001265.1	RefSeq	gene	1	776	.	-	.	ID=gene-STY7866_RS21110;Name=STY7866_RS21110;end_range=776,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21110;partial=true;start_range=.,1
NZ_CAAR01001265.1	Protein Homology	CDS	1	776	.	-	1	ID=cds-WP_000596510.1;Parent=gene-STY7866_RS21110;Dbxref=Genbank:WP_000596510.1;Name=WP_000596510.1;end_range=776,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457865.1;locus_tag=STY7866_RS21110;partial=true;product=phage portal protein;protein_id=WP_000596510.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001264.1 1 342
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001264.1	RefSeq	region	1	342	.	+	.	ID=NZ_CAAR01001264.1:1..342;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001264.1	RefSeq	pseudogene	1	342	.	+	.	ID=gene-STY7866_RS21105;Name=STY7866_RS21105;end_range=342,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21105;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001264.1	Protein Homology	CDS	1	342	.	+	2	ID=cds-STY7866_RS21105;Parent=gene-STY7866_RS21105;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=342,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458709.1;locus_tag=STY7866_RS21105;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001263.1 1 340
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001263.1	RefSeq	region	1	340	.	+	.	ID=NZ_CAAR01001263.1:1..340;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001263.1	RefSeq	pseudogene	1	340	.	+	.	ID=gene-STY7866_RS21100;Name=STY7866_RS21100;end_range=340,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21100;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001263.1	Protein Homology	CDS	1	340	.	+	1	ID=cds-STY7866_RS21100;Parent=gene-STY7866_RS21100;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=340,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457866.1;locus_tag=STY7866_RS21100;partial=true;product=oxidoreductase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001262.1 1 217
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001262.1	RefSeq	region	1	217	.	+	.	ID=NZ_CAAR01001262.1:1..217;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001262.1	RefSeq	gene	1	217	.	+	.	ID=gene-STY7866_RS21095;Name=STY7866_RS21095;end_range=217,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21095;partial=true;start_range=.,1
NZ_CAAR01001262.1	Protein Homology	CDS	1	217	.	+	1	ID=cds-WP_000112631.1;Parent=gene-STY7866_RS21095;Dbxref=Genbank:WP_000112631.1;Name=WP_000112631.1;end_range=217,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457868.1;locus_tag=STY7866_RS21095;partial=true;product=hypothetical protein;protein_id=WP_000112631.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01001261.1 1 1530
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001261.1	RefSeq	region	1	1530	.	+	.	ID=NZ_CAAR01001261.1:1..1530;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001261.1	RefSeq	pseudogene	1	118	.	+	.	ID=gene-STY7866_RS21070;Name=STY7866_RS21070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS21070;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001261.1	Protein Homology	CDS	1	118	.	+	1	ID=cds-STY7866_RS21070;Parent=gene-STY7866_RS21070;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457871.1;locus_tag=STY7866_RS21070;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001261.1	RefSeq	gene	122	337	.	+	.	ID=gene-STY7866_RS21075;Name=STY7866_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21075
NZ_CAAR01001261.1	Protein Homology	CDS	122	337	.	+	0	ID=cds-WP_000171568.1;Parent=gene-STY7866_RS21075;Dbxref=Genbank:WP_000171568.1;Name=WP_000171568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457872.1;locus_tag=STY7866_RS21075;product=hypothetical protein;protein_id=WP_000171568.1;transl_table=11
NZ_CAAR01001261.1	RefSeq	gene	357	830	.	+	.	ID=gene-STY7866_RS21080;Name=STY7866_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21080
NZ_CAAR01001261.1	Protein Homology	CDS	357	830	.	+	0	ID=cds-WP_001341072.1;Parent=gene-STY7866_RS21080;Dbxref=Genbank:WP_001341072.1;Name=WP_001341072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457873.1;locus_tag=STY7866_RS21080;product=lysozyme;protein_id=WP_001341072.1;transl_table=11
NZ_CAAR01001261.1	RefSeq	gene	832	1209	.	+	.	ID=gene-STY7866_RS21085;Name=STY7866_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21085
NZ_CAAR01001261.1	Protein Homology	CDS	832	1209	.	+	0	ID=cds-WP_000727853.1;Parent=gene-STY7866_RS21085;Dbxref=Genbank:WP_000727853.1;Name=WP_000727853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000730949.1;locus_tag=STY7866_RS21085;product=hypothetical protein;protein_id=WP_000727853.1;transl_table=11
NZ_CAAR01001261.1	RefSeq	gene	1206	1530	.	+	.	ID=gene-STY7866_RS21090;Name=STY7866_RS21090;end_range=1530,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21090;partial=true
NZ_CAAR01001261.1	Protein Homology	CDS	1206	1530	.	+	0	ID=cds-WP_001080926.1;Parent=gene-STY7866_RS21090;Dbxref=Genbank:WP_001080926.1;Name=WP_001080926.1;end_range=1530,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457875.1;locus_tag=STY7866_RS21090;partial=true;product=hypothetical protein;protein_id=WP_001080926.1;transl_table=11
##sequence-region NZ_CAAR01001260.1 1 918
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001260.1	RefSeq	region	1	918	.	+	.	ID=NZ_CAAR01001260.1:1..918;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001260.1	RefSeq	gene	161	918	.	+	.	ID=gene-STY7866_RS21065;Name=STY7866_RS21065;end_range=918,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21065;partial=true
NZ_CAAR01001260.1	Protein Homology	CDS	161	918	.	+	0	ID=cds-WP_000216243.1;Parent=gene-STY7866_RS21065;Dbxref=Genbank:WP_000216243.1;Name=WP_000216243.1;end_range=918,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457867.1;locus_tag=STY7866_RS21065;partial=true;product=GPO family capsid scaffolding protein;protein_id=WP_000216243.1;transl_table=11
##sequence-region NZ_CAAR01001259.1 1 256
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001259.1	RefSeq	region	1	256	.	+	.	ID=NZ_CAAR01001259.1:1..256;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001259.1	RefSeq	gene	33	256	.	+	.	ID=gene-STY7866_RS26575;Name=STY7866_RS26575;end_range=256,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26575;partial=true
NZ_CAAR01001259.1	Protein Homology	CDS	33	256	.	+	0	ID=cds-WP_001766179.1;Parent=gene-STY7866_RS26575;Dbxref=Genbank:WP_001766179.1;Name=WP_001766179.1;end_range=256,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458718.1;locus_tag=STY7866_RS26575;partial=true;product=TraR/DksA family transcriptional regulator;protein_id=WP_001766179.1;transl_table=11
##sequence-region NZ_CAAR01001258.1 1 195
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001258.1	RefSeq	region	1	195	.	+	.	ID=NZ_CAAR01001258.1:1..195;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001257.1 1 20759
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001257.1	RefSeq	region	1	20759	.	+	.	ID=NZ_CAAR01001257.1:1..20759;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001257.1	RefSeq	gene	1	310	.	-	.	ID=gene-STY7866_RS20950;Name=STY7866_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20950;partial=true;start_range=.,1
NZ_CAAR01001257.1	Protein Homology	CDS	1	310	.	-	0	ID=cds-WP_000467097.1;Parent=gene-STY7866_RS20950;Dbxref=Genbank:WP_000467097.1;Name=WP_000467097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=STY7866_RS20950;partial=true;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467097.1;start_range=.,1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	356	2284	.	-	.	ID=gene-STY7866_RS20955;Name=STY7866_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20955
NZ_CAAR01001257.1	Protein Homology	CDS	356	2284	.	-	0	ID=cds-WP_000121969.1;Parent=gene-STY7866_RS20955;Dbxref=Genbank:WP_000121969.1;Name=WP_000121969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455080.1;locus_tag=STY7866_RS20955;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000121969.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	2398	2949	.	-	.	ID=gene-STY7866_RS20960;Name=STY7866_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20960
NZ_CAAR01001257.1	Protein Homology	CDS	2398	2949	.	-	0	ID=cds-WP_000127348.1;Parent=gene-STY7866_RS20960;Dbxref=Genbank:WP_000127348.1;Name=WP_000127348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=STY7866_RS20960;product=adenine phosphoribosyltransferase;protein_id=WP_000127348.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	3102	3479	.	-	.	ID=gene-STY7866_RS20965;Name=STY7866_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20965
NZ_CAAR01001257.1	Protein Homology	CDS	3102	3479	.	-	0	ID=cds-WP_001189860.1;Parent=gene-STY7866_RS20965;Dbxref=Genbank:WP_001189860.1;Name=WP_001189860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455078.1;locus_tag=STY7866_RS20965;product=DUF454 family protein;protein_id=WP_001189860.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	pseudogene	3560	4075	.	+	.	ID=gene-STY7866_RS20970;Name=priC;gbkey=Gene;gene=priC;gene_biotype=pseudogene;locus_tag=STY7866_RS20970;pseudo=true
NZ_CAAR01001257.1	Protein Homology	CDS	3560	4075	.	+	0	ID=cds-STY7866_RS20970;Parent=gene-STY7866_RS20970;Note=internal stop;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459476.1;locus_tag=STY7866_RS20970;product=primosomal replication protein N'';pseudo=true;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	4089	4256	.	+	.	ID=gene-STY7866_RS20975;Name=STY7866_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20975
NZ_CAAR01001257.1	Protein Homology	CDS	4089	4256	.	+	0	ID=cds-WP_000051161.1;Parent=gene-STY7866_RS20975;Dbxref=Genbank:WP_000051161.1;Name=WP_000051161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455077.1;locus_tag=STY7866_RS20975;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051161.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	4326	5249	.	+	.	ID=gene-STY7866_RS20980;Name=STY7866_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20980
NZ_CAAR01001257.1	Protein Homology	CDS	4326	5249	.	+	0	ID=cds-WP_000440515.1;Parent=gene-STY7866_RS20980;Dbxref=Genbank:WP_000440515.1;Name=WP_000440515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455076.1;locus_tag=STY7866_RS20980;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000440515.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	5291	8653	.	-	.	ID=gene-STY7866_RS20985;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=STY7866_RS20985
NZ_CAAR01001257.1	Protein Homology	CDS	5291	8653	.	-	0	ID=cds-WP_000178244.1;Parent=gene-STY7866_RS20985;Dbxref=Genbank:WP_000178244.1;Name=WP_000178244.1;gbkey=CDS;gene=mscK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455075.1;locus_tag=STY7866_RS20985;product=mechanosensitive channel MscK;protein_id=WP_000178244.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	8772	9425	.	-	.	ID=gene-STY7866_RS20990;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=STY7866_RS20990
NZ_CAAR01001257.1	Protein Homology	CDS	8772	9425	.	-	0	ID=cds-WP_000101755.1;Parent=gene-STY7866_RS20990;Dbxref=Genbank:WP_000101755.1;Name=WP_000101755.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455074.1;locus_tag=STY7866_RS20990;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101755.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	9567	10760	.	+	.	ID=gene-STY7866_RS20995;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=STY7866_RS20995
NZ_CAAR01001257.1	Protein Homology	CDS	9567	10760	.	+	0	ID=cds-WP_001039199.1;Parent=gene-STY7866_RS20995;Dbxref=Genbank:WP_001039199.1;Name=WP_001039199.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455073.1;locus_tag=STY7866_RS20995;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001039199.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	10783	13932	.	+	.	ID=gene-STY7866_RS21000;Name=STY7866_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21000
NZ_CAAR01001257.1	Protein Homology	CDS	10783	13932	.	+	0	ID=cds-WP_001132507.1;Parent=gene-STY7866_RS21000;Dbxref=Genbank:WP_001132507.1;Name=WP_001132507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455072.1;locus_tag=STY7866_RS21000;product=multidrug efflux RND transporter permease subunit;protein_id=WP_001132507.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	14428	14802	.	+	.	ID=gene-STY7866_RS21005;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=STY7866_RS21005
NZ_CAAR01001257.1	Protein Homology	CDS	14428	14802	.	+	0	ID=cds-WP_000344807.1;Parent=gene-STY7866_RS21005;Dbxref=Genbank:WP_000344807.1;Name=WP_000344807.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=STY7866_RS21005;product=Hha toxicity modulator TomB;protein_id=WP_000344807.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	14830	15048	.	+	.	ID=gene-STY7866_RS21010;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=STY7866_RS21010
NZ_CAAR01001257.1	Protein Homology	CDS	14830	15048	.	+	0	ID=cds-WP_001280991.1;Parent=gene-STY7866_RS21010;Dbxref=Genbank:WP_001280991.1;Name=WP_001280991.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455070.1;locus_tag=STY7866_RS21010;product=hemolysin expression modulator Hha;protein_id=WP_001280991.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	15227	15778	.	+	.	ID=gene-STY7866_RS21015;Name=STY7866_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21015
NZ_CAAR01001257.1	Protein Homology	CDS	15227	15778	.	+	0	ID=cds-WP_001278793.1;Parent=gene-STY7866_RS21015;Dbxref=Genbank:WP_001278793.1;Name=WP_001278793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455069.1;locus_tag=STY7866_RS21015;product=maltose O-acetyltransferase;protein_id=WP_001278793.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	15896	16366	.	+	.	ID=gene-STY7866_RS21020;Name=STY7866_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21020
NZ_CAAR01001257.1	Protein Homology	CDS	15896	16366	.	+	0	ID=cds-WP_000136183.1;Parent=gene-STY7866_RS21020;Dbxref=Genbank:WP_000136183.1;Name=WP_000136183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455068.1;locus_tag=STY7866_RS21020;product=membrane protein;protein_id=WP_000136183.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	16422	16562	.	-	.	ID=gene-STY7866_RS21025;Name=STY7866_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21025
NZ_CAAR01001257.1	Protein Homology	CDS	16422	16562	.	-	0	ID=cds-WP_001197749.1;Parent=gene-STY7866_RS21025;Dbxref=Genbank:WP_001197749.1;Name=WP_001197749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455067.1;locus_tag=STY7866_RS21025;product=50S ribosomal protein L36;protein_id=WP_001197749.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	16568	16828	.	-	.	ID=gene-STY7866_RS21030;Name=STY7866_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21030
NZ_CAAR01001257.1	Protein Homology	CDS	16568	16828	.	-	0	ID=cds-WP_000801415.1;Parent=gene-STY7866_RS21030;Dbxref=Genbank:WP_000801415.1;Name=WP_000801415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455066.1;locus_tag=STY7866_RS21030;product=type B 50S ribosomal protein L31;protein_id=WP_000801415.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	17053	18603	.	+	.	ID=gene-STY7866_RS21035;Name=STY7866_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21035
NZ_CAAR01001257.1	Protein Homology	CDS	17053	18603	.	+	0	ID=cds-WP_000213129.1;Parent=gene-STY7866_RS21035;Dbxref=Genbank:WP_000213129.1;Name=WP_000213129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455065.1;locus_tag=STY7866_RS21035;product=EAL domain-containing protein;protein_id=WP_000213129.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	18653	18749	.	-	.	ID=gene-STY7866_RS29350;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=STY7866_RS29350
NZ_CAAR01001257.1	cmsearch	SRP_RNA	18653	18749	.	-	.	ID=rna-STY7866_RS29350;Parent=gene-STY7866_RS29350;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS29350;product=signal recognition particle sRNA small type
NZ_CAAR01001257.1	cmsearch	exon	18653	18749	.	-	.	ID=exon-STY7866_RS29350-1;Parent=rna-STY7866_RS29350;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS29350;product=signal recognition particle sRNA small type
NZ_CAAR01001257.1	RefSeq	gene	18834	19223	.	+	.	ID=gene-STY7866_RS21040;Name=STY7866_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21040
NZ_CAAR01001257.1	Protein Homology	CDS	18834	19223	.	+	0	ID=cds-WP_000961285.1;Parent=gene-STY7866_RS21040;Dbxref=Genbank:WP_000961285.1;Name=WP_000961285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455064.1;locus_tag=STY7866_RS21040;product=MGMT family protein;protein_id=WP_000961285.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	19256	19825	.	-	.	ID=gene-STY7866_RS21045;Name=STY7866_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS21045
NZ_CAAR01001257.1	Protein Homology	CDS	19256	19825	.	-	0	ID=cds-WP_000779802.1;Parent=gene-STY7866_RS21045;Dbxref=Genbank:WP_000779802.1;Name=WP_000779802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455063.1;locus_tag=STY7866_RS21045;product=hypothetical protein;protein_id=WP_000779802.1;transl_table=11
NZ_CAAR01001257.1	RefSeq	gene	20040	20759	.	+	.	ID=gene-STY7866_RS21050;Name=tesB;end_range=20759,.;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=STY7866_RS21050;partial=true
NZ_CAAR01001257.1	Protein Homology	CDS	20040	20759	.	+	0	ID=cds-WP_000084178.1;Parent=gene-STY7866_RS21050;Dbxref=Genbank:WP_000084178.1;Name=WP_000084178.1;end_range=20759,.;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455062.1;locus_tag=STY7866_RS21050;partial=true;product=acyl-CoA thioesterase II;protein_id=WP_000084178.1;transl_table=11
##sequence-region NZ_CAAR01001256.1 1 4520
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001256.1	RefSeq	region	1	4520	.	+	.	ID=NZ_CAAR01001256.1:1..4520;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001256.1	RefSeq	gene	36	794	.	-	.	ID=gene-STY7866_RS20925;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=STY7866_RS20925
NZ_CAAR01001256.1	Protein Homology	CDS	36	794	.	-	0	ID=cds-WP_000442732.1;Parent=gene-STY7866_RS20925;Dbxref=Genbank:WP_000442732.1;Name=WP_000442732.1;gbkey=CDS;gene=chbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456195.1;locus_tag=STY7866_RS20925;product=chitin disaccharide deacetylase;protein_id=WP_000442732.1;transl_table=11
NZ_CAAR01001256.1	RefSeq	gene	807	2162	.	-	.	ID=gene-STY7866_RS20930;Name=STY7866_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20930
NZ_CAAR01001256.1	Protein Homology	CDS	807	2162	.	-	0	ID=cds-WP_000078788.1;Parent=gene-STY7866_RS20930;Dbxref=Genbank:WP_000078788.1;Name=WP_000078788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456196.1;locus_tag=STY7866_RS20930;product=6-phospho-beta-glucosidase;protein_id=WP_000078788.1;transl_table=11
NZ_CAAR01001256.1	RefSeq	gene	2287	3129	.	-	.	ID=gene-STY7866_RS20935;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=STY7866_RS20935
NZ_CAAR01001256.1	Protein Homology	CDS	2287	3129	.	-	0	ID=cds-WP_000983393.1;Parent=gene-STY7866_RS20935;Dbxref=Genbank:WP_000983393.1;Name=WP_000983393.1;gbkey=CDS;gene=chbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456197.1;locus_tag=STY7866_RS20935;product=transcriptional regulator ChbR;protein_id=WP_000983393.1;transl_table=11
NZ_CAAR01001256.1	RefSeq	gene	3140	3487	.	-	.	ID=gene-STY7866_RS20940;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=STY7866_RS20940
NZ_CAAR01001256.1	Protein Homology	CDS	3140	3487	.	-	0	ID=cds-WP_000459882.1;Parent=gene-STY7866_RS20940;Dbxref=Genbank:WP_000459882.1;Name=WP_000459882.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456198.1;locus_tag=STY7866_RS20940;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000459882.1;transl_table=11
NZ_CAAR01001256.1	RefSeq	gene	3538	4520	.	-	.	ID=gene-STY7866_RS20945;Name=STY7866_RS20945;end_range=4520,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20945;partial=true
NZ_CAAR01001256.1	Protein Homology	CDS	3538	4520	.	-	2	ID=cds-WP_000319859.1;Parent=gene-STY7866_RS20945;Dbxref=Genbank:WP_000319859.1;Name=WP_000319859.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN'-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;end_range=4520,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456199.1;locus_tag=STY7866_RS20945;partial=true;product=PTS transporter subunit EIIC;protein_id=WP_000319859.1;transl_table=11
##sequence-region NZ_CAAR01001255.1 1 16640
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001255.1	RefSeq	region	1	16640	.	+	.	ID=NZ_CAAR01001255.1:1..16640;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001255.1	RefSeq	gene	181	1041	.	+	.	ID=gene-STY7866_RS20840;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=STY7866_RS20840
NZ_CAAR01001255.1	Protein Homology	CDS	181	1041	.	+	0	ID=cds-WP_000389833.1;Parent=gene-STY7866_RS20840;Dbxref=Genbank:WP_000389833.1;Name=WP_000389833.1;gbkey=CDS;gene=mscS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457465.1;locus_tag=STY7866_RS20840;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389833.1;transl_table=11
NZ_CAAR01001255.1	RefSeq	gene	1242	1877	.	+	.	ID=gene-STY7866_RS20845;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=STY7866_RS20845
NZ_CAAR01001255.1	Protein Homology	CDS	1242	1877	.	+	0	ID=cds-WP_000626863.1;Parent=gene-STY7866_RS20845;Dbxref=Genbank:WP_000626863.1;Name=WP_000626863.1;gbkey=CDS;gene=argO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=STY7866_RS20845;product=arginine exporter ArgO;protein_id=WP_000626863.1;transl_table=11
NZ_CAAR01001255.1	RefSeq	gene	1971	2717	.	+	.	ID=gene-STY7866_RS20850;Name=STY7866_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20850
NZ_CAAR01001255.1	Protein Homology	CDS	1971	2717	.	+	0	ID=cds-WP_000669854.1;Parent=gene-STY7866_RS20850;Dbxref=Genbank:WP_000669854.1;Name=WP_000669854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457463.1;locus_tag=STY7866_RS20850;product=oxidative stress defense protein;protein_id=WP_000669854.1;transl_table=11
NZ_CAAR01001255.1	RefSeq	gene	2983	3876	.	-	.	ID=gene-STY7866_RS20860;Name=STY7866_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20860
NZ_CAAR01001255.1	Protein Homology	CDS	2983	3876	.	-	0	ID=cds-WP_000828344.1;Parent=gene-STY7866_RS20860;Dbxref=Genbank:WP_000828344.1;Name=WP_000828344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457462.1;locus_tag=STY7866_RS20860;product=LysR family transcriptional regulator ArgP;protein_id=WP_000828344.1;transl_table=11
NZ_CAAR01001255.1	RefSeq	gene	4029	4688	.	+	.	ID=gene-STY7866_RS20865;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=STY7866_RS20865
NZ_CAAR01001255.1	Protein Homology	CDS	4029	4688	.	+	0	ID=cds-WP_000189741.1;Parent=gene-STY7866_RS20865;Dbxref=Genbank:WP_000189741.1;Name=WP_000189741.1;gbkey=CDS;gene=rpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457461.1;locus_tag=STY7866_RS20865;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189741.1;transl_table=11
NZ_CAAR01001255.1	RefSeq	gene	4954	6186	.	+	.	ID=gene-STY7866_RS20870;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=STY7866_RS20870
NZ_CAAR01001255.1	Protein Homology	CDS	4954	6186	.	+	0	ID=cds-WP_001151621.1;Parent=gene-STY7866_RS20870;Dbxref=Genbank:WP_001151621.1;Name=WP_001151621.1;gbkey=CDS;gene=serA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457460.1;locus_tag=STY7866_RS20870;product=phosphoglycerate dehydrogenase;protein_id=WP_001151621.1;transl_table=11
NZ_CAAR01001255.1	RefSeq	gene	6567	7163	.	-	.	ID=gene-STY7866_RS20875;Name=STY7866_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20875
NZ_CAAR01001255.1	Protein Homology	CDS	6567	7163	.	-	0	ID=cds-WP_014341478.1;Parent=gene-STY7866_RS20875;Dbxref=Genbank:WP_014341478.1;Name=WP_014341478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=STY7866_RS20875;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_014341478.1;transl_table=11
NZ_CAAR01001255.1	RefSeq	gene	7184	7367	.	-	.	ID=gene-STY7866_RS29345;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=STY7866_RS29345
NZ_CAAR01001255.1	cmsearch	ncRNA	7184	7367	.	-	.	ID=rna-STY7866_RS29345;Parent=gene-STY7866_RS29345;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS29345;product=6S RNA
NZ_CAAR01001255.1	cmsearch	exon	7184	7367	.	-	.	ID=exon-STY7866_RS29345-1;Parent=rna-STY7866_RS29345;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS29345;product=6S RNA
NZ_CAAR01001255.1	RefSeq	gene	7413	7739	.	-	.	ID=gene-STY7866_RS20880;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=STY7866_RS20880
NZ_CAAR01001255.1	Protein Homology	CDS	7413	7739	.	-	0	ID=cds-WP_001276010.1;Parent=gene-STY7866_RS20880;Dbxref=Genbank:WP_001276010.1;Name=WP_001276010.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818392.1;locus_tag=STY7866_RS20880;product=cell division protein ZapA;protein_id=WP_001276010.1;transl_table=11
NZ_CAAR01001255.1	RefSeq	gene	7906	8484	.	+	.	ID=gene-STY7866_RS20885;Name=STY7866_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20885
NZ_CAAR01001255.1	Protein Homology	CDS	7906	8484	.	+	0	ID=cds-WP_000027229.1;Parent=gene-STY7866_RS20885;Dbxref=Genbank:WP_000027229.1;Name=WP_000027229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417385.4;locus_tag=STY7866_RS20885;product=YecA family protein;protein_id=WP_000027229.1;transl_table=11
NZ_CAAR01001255.1	RefSeq	gene	8510	9826	.	+	.	ID=gene-STY7866_RS20890;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=STY7866_RS20890
NZ_CAAR01001255.1	Protein Homology	CDS	8510	9826	.	+	0	ID=cds-WP_000193684.1;Parent=gene-STY7866_RS20890;Dbxref=Genbank:WP_000193684.1;Name=WP_000193684.1;gbkey=CDS;gene=pepP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457456.1;locus_tag=STY7866_RS20890;product=Xaa-Pro aminopeptidase;protein_id=WP_000193684.1;transl_table=11
NZ_CAAR01001255.1	RefSeq	gene	9823	11001	.	+	.	ID=gene-STY7866_RS20895;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=STY7866_RS20895
NZ_CAAR01001255.1	Protein Homology	CDS	9823	11001	.	+	0	ID=cds-WP_000111142.1;Parent=gene-STY7866_RS20895;Dbxref=Genbank:WP_000111142.1;Name=WP_000111142.1;gbkey=CDS;gene=ubiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457455.1;locus_tag=STY7866_RS20895;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_000111142.1;transl_table=11
NZ_CAAR01001255.1	RefSeq	gene	11130	12332	.	+	.	ID=gene-STY7866_RS20900;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=STY7866_RS20900
NZ_CAAR01001255.1	Protein Homology	CDS	11130	12332	.	+	0	ID=cds-WP_001192154.1;Parent=gene-STY7866_RS20900;Dbxref=Genbank:WP_001192154.1;Name=WP_001192154.1;gbkey=CDS;gene=ubiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457454.1;locus_tag=STY7866_RS20900;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192154.1;transl_table=11
NZ_CAAR01001255.1	RefSeq	gene	12786	13880	.	+	.	ID=gene-STY7866_RS20905;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=STY7866_RS20905
NZ_CAAR01001255.1	Protein Homology	CDS	12786	13880	.	+	0	ID=cds-WP_000068738.1;Parent=gene-STY7866_RS20905;Dbxref=Genbank:WP_000068738.1;Name=WP_000068738.1;gbkey=CDS;gene=gcvT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457453.1;locus_tag=STY7866_RS20905;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068738.1;transl_table=11
NZ_CAAR01001255.1	RefSeq	gene	13906	14295	.	+	.	ID=gene-STY7866_RS20910;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=STY7866_RS20910
NZ_CAAR01001255.1	Protein Homology	CDS	13906	14295	.	+	0	ID=cds-WP_001295377.1;Parent=gene-STY7866_RS20910;Dbxref=Genbank:WP_001295377.1;Name=WP_001295377.1;gbkey=CDS;gene=gcvH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=STY7866_RS20910;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11
NZ_CAAR01001255.1	RefSeq	pseudogene	14458	16640	.	+	.	ID=gene-STY7866_RS20915;Name=gcvP;end_range=16640,.;gbkey=Gene;gene=gcvP;gene_biotype=pseudogene;locus_tag=STY7866_RS20915;partial=true;pseudo=true
NZ_CAAR01001255.1	Protein Homology	CDS	14458	16640	.	+	0	ID=cds-STY7866_RS20915;Parent=gene-STY7866_RS20915;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=16640,.;gbkey=CDS;gene=gcvP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457451.1;locus_tag=STY7866_RS20915;partial=true;product=aminomethyl-transferring glycine dehydrogenase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001254.1 1 22905
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001254.1	RefSeq	region	1	22905	.	+	.	ID=NZ_CAAR01001254.1:1..22905;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001254.1	RefSeq	pseudogene	162	551	.	+	.	ID=gene-STY7866_RS29335;Name=STY7866_RS29335;end_range=551,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29335;partial=true;pseudo=true
NZ_CAAR01001254.1	Protein Homology	CDS	162	551	.	+	0	ID=cds-STY7866_RS29335;Parent=gene-STY7866_RS29335;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=551,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01367.18;locus_tag=STY7866_RS29335;partial=true;product=DNA polymerase I;pseudo=true;transl_table=11
NZ_CAAR01001254.1	RefSeq	pseudogene	681	2529	.	+	.	ID=gene-STY7866_RS20735;Name=polA;gbkey=Gene;gene=polA;gene_biotype=pseudogene;locus_tag=STY7866_RS20735;pseudo=true
NZ_CAAR01001254.1	Protein Homology	CDS	681	2529	.	+	0	ID=cds-STY7866_RS20735;Parent=gene-STY7866_RS20735;Note=frameshifted;gbkey=CDS;gene=polA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001377152.1;locus_tag=STY7866_RS20735;product=DNA polymerase I;pseudo=true;transl_table=11
NZ_CAAR01001254.1	RefSeq	gene	2865	3497	.	-	.	ID=gene-STY7866_RS20740;Name=STY7866_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20740
NZ_CAAR01001254.1	Protein Homology	CDS	2865	3497	.	-	0	ID=cds-WP_000183327.1;Parent=gene-STY7866_RS20740;Dbxref=Genbank:WP_000183327.1;Name=WP_000183327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458048.1;locus_tag=STY7866_RS20740;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=WP_000183327.1;transl_table=11
NZ_CAAR01001254.1	RefSeq	gene	3737	3961	.	+	.	ID=gene-STY7866_RS20745;Name=STY7866_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20745
NZ_CAAR01001254.1	Protein Homology	CDS	3737	3961	.	+	0	ID=cds-WP_001541209.1;Parent=gene-STY7866_RS20745;Dbxref=Genbank:WP_001541209.1;Name=WP_001541209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=STY7866_RS20745;product=hypothetical protein;protein_id=WP_001541209.1;transl_table=11
NZ_CAAR01001254.1	RefSeq	gene	4080	4595	.	+	.	ID=gene-STY7866_RS20750;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=STY7866_RS20750
NZ_CAAR01001254.1	Protein Homology	CDS	4080	4595	.	+	0	ID=cds-WP_000743292.1;Parent=gene-STY7866_RS20750;Dbxref=Genbank:WP_000743292.1;Name=WP_000743292.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458046.1;locus_tag=STY7866_RS20750;product=Der GTPase-activating protein YihI;protein_id=WP_000743292.1;transl_table=11
NZ_CAAR01001254.1	RefSeq	gene	4784	6157	.	+	.	ID=gene-STY7866_RS20755;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=STY7866_RS20755
NZ_CAAR01001254.1	Protein Homology	CDS	4784	6157	.	+	0	ID=cds-WP_000003520.1;Parent=gene-STY7866_RS20755;Dbxref=Genbank:WP_000003520.1;Name=WP_000003520.1;gbkey=CDS;gene=hemN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121847.1;locus_tag=STY7866_RS20755;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000003520.1;transl_table=11
NZ_CAAR01001254.1	RefSeq	gene	6247	6357	.	-	.	ID=gene-STY7866_RS29340;Name=yshB;gbkey=Gene;gene=yshB;gene_biotype=protein_coding;locus_tag=STY7866_RS29340
NZ_CAAR01001254.1	Protein Homology	CDS	6247	6357	.	-	0	ID=cds-WP_001578131.1;Parent=gene-STY7866_RS29340;Dbxref=Genbank:WP_001578131.1;Name=WP_001578131.1;gbkey=CDS;gene=yshB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=STY7866_RS29340;product=YshB family small membrane protein;protein_id=WP_001578131.1;transl_table=11
NZ_CAAR01001254.1	RefSeq	gene	6470	7879	.	-	.	ID=gene-STY7866_RS20760;Name=STY7866_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20760
NZ_CAAR01001254.1	Protein Homology	CDS	6470	7879	.	-	0	ID=cds-WP_001188774.1;Parent=gene-STY7866_RS20760;Dbxref=Genbank:WP_001188774.1;Name=WP_001188774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=STY7866_RS20760;product=nitrogen regulation protein NR(I);protein_id=WP_001188774.1;transl_table=11
NZ_CAAR01001254.1	RefSeq	gene	7888	8937	.	-	.	ID=gene-STY7866_RS20765;Name=STY7866_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20765
NZ_CAAR01001254.1	Protein Homology	CDS	7888	8937	.	-	0	ID=cds-WP_000146194.1;Parent=gene-STY7866_RS20765;Dbxref=Genbank:WP_000146194.1;Name=WP_000146194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458043.1;locus_tag=STY7866_RS20765;product=nitrogen regulation protein NR(II);protein_id=WP_000146194.1;transl_table=11
NZ_CAAR01001254.1	RefSeq	gene	9212	10621	.	-	.	ID=gene-STY7866_RS20770;Name=STY7866_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20770
NZ_CAAR01001254.1	Protein Homology	CDS	9212	10621	.	-	0	ID=cds-WP_001271699.1;Parent=gene-STY7866_RS20770;Dbxref=Genbank:WP_001271699.1;Name=WP_001271699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=STY7866_RS20770;product=glutamate--ammonia ligase;protein_id=WP_001271699.1;transl_table=11
NZ_CAAR01001254.1	RefSeq	gene	10997	12820	.	+	.	ID=gene-STY7866_RS20775;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=STY7866_RS20775
NZ_CAAR01001254.1	Protein Homology	CDS	10997	12820	.	+	0	ID=cds-WP_000572064.1;Parent=gene-STY7866_RS20775;Dbxref=Genbank:WP_000572064.1;Name=WP_000572064.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458041.1;locus_tag=STY7866_RS20775;product=ribosome-dependent GTPase TypA;protein_id=WP_000572064.1;transl_table=11
NZ_CAAR01001254.1	RefSeq	pseudogene	12875	13611	.	-	.	ID=gene-STY7866_RS20780;Name=STY7866_RS20780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20780;pseudo=true
NZ_CAAR01001254.1	Protein Homology	CDS	12875	13611	.	-	0	ID=cds-STY7866_RS20780;Parent=gene-STY7866_RS20780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458040.1;locus_tag=STY7866_RS20780;product=HAD family phosphatase;pseudo=true;transl_table=11
NZ_CAAR01001254.1	RefSeq	gene	13596	14474	.	-	.	ID=gene-STY7866_RS20785;Name=STY7866_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20785
NZ_CAAR01001254.1	Protein Homology	CDS	13596	14474	.	-	0	ID=cds-WP_001681897.1;Parent=gene-STY7866_RS20785;Dbxref=Genbank:WP_001681897.1;Name=WP_001681897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458039.1;locus_tag=STY7866_RS20785;product=membrane protein;protein_id=WP_001681897.1;transl_table=11
NZ_CAAR01001254.1	RefSeq	pseudogene	14471	15713	.	-	.	ID=gene-STY7866_RS20790;Name=STY7866_RS20790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20790;pseudo=true
NZ_CAAR01001254.1	Protein Homology	CDS	14471	15713	.	-	0	ID=cds-STY7866_RS20790;Parent=gene-STY7866_RS20790;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=STY7866_RS20790;product=coproporphyrinogen III oxidase family protein;pseudo=true;transl_table=11
NZ_CAAR01001254.1	RefSeq	gene	15715	16590	.	-	.	ID=gene-STY7866_RS20800;Name=STY7866_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20800
NZ_CAAR01001254.1	Protein Homology	CDS	15715	16590	.	-	0	ID=cds-WP_000282797.1;Parent=gene-STY7866_RS20800;Dbxref=Genbank:WP_000282797.1;Name=WP_000282797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458038.1;locus_tag=STY7866_RS20800;product=sulfatase-like hydrolase/transferase;protein_id=WP_000282797.1;transl_table=11
NZ_CAAR01001254.1	RefSeq	gene	16583	17191	.	-	.	ID=gene-STY7866_RS20805;Name=STY7866_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20805
NZ_CAAR01001254.1	Protein Homology	CDS	16583	17191	.	-	0	ID=cds-WP_001760434.1;Parent=gene-STY7866_RS20805;Dbxref=Genbank:WP_001760434.1;Name=WP_001760434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675469.1;locus_tag=STY7866_RS20805;product=hypothetical protein;protein_id=WP_001760434.1;transl_table=11
NZ_CAAR01001254.1	RefSeq	gene	17324	17569	.	-	.	ID=gene-STY7866_RS20810;Name=STY7866_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20810
NZ_CAAR01001254.1	GeneMarkS-2+	CDS	17324	17569	.	-	0	ID=cds-WP_000631311.1;Parent=gene-STY7866_RS20810;Dbxref=Genbank:WP_000631311.1;Name=WP_000631311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=STY7866_RS20810;product=hypothetical protein;protein_id=WP_000631311.1;transl_table=11
NZ_CAAR01001254.1	RefSeq	gene	17621	18469	.	-	.	ID=gene-STY7866_RS20815;Name=STY7866_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20815
NZ_CAAR01001254.1	Protein Homology	CDS	17621	18469	.	-	0	ID=cds-WP_001042080.1;Parent=gene-STY7866_RS20815;Dbxref=Genbank:WP_001042080.1;Name=WP_001042080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458035.1;locus_tag=STY7866_RS20815;product=hypothetical protein;protein_id=WP_001042080.1;transl_table=11
NZ_CAAR01001254.1	RefSeq	gene	18626	19318	.	-	.	ID=gene-STY7866_RS20820;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=STY7866_RS20820
NZ_CAAR01001254.1	Protein Homology	CDS	18626	19318	.	-	0	ID=cds-WP_000838825.1;Parent=gene-STY7866_RS20820;Dbxref=Genbank:WP_000838825.1;Name=WP_000838825.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458034.1;locus_tag=STY7866_RS20820;product=porin OmpL;protein_id=WP_000838825.1;transl_table=11
NZ_CAAR01001254.1	RefSeq	gene	19386	20807	.	-	.	ID=gene-STY7866_RS20825;Name=STY7866_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20825
NZ_CAAR01001254.1	Protein Homology	CDS	19386	20807	.	-	0	ID=cds-WP_000064893.1;Parent=gene-STY7866_RS20825;Dbxref=Genbank:WP_000064893.1;Name=WP_000064893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458033.1;locus_tag=STY7866_RS20825;product=MFS transporter;protein_id=WP_000064893.1;transl_table=11
NZ_CAAR01001254.1	RefSeq	gene	20853	22235	.	-	.	ID=gene-STY7866_RS20830;Name=STY7866_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20830
NZ_CAAR01001254.1	Protein Homology	CDS	20853	22235	.	-	0	ID=cds-WP_000084241.1;Parent=gene-STY7866_RS20830;Dbxref=Genbank:WP_000084241.1;Name=WP_000084241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458032.1;locus_tag=STY7866_RS20830;product=MFS transporter;protein_id=WP_000084241.1;transl_table=11
NZ_CAAR01001254.1	RefSeq	pseudogene	22281	22905	.	-	.	ID=gene-STY7866_RS20835;Name=STY7866_RS20835;end_range=22905,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20835;partial=true;pseudo=true
NZ_CAAR01001254.1	Protein Homology	CDS	22281	22905	.	-	1	ID=cds-STY7866_RS20835;Parent=gene-STY7866_RS20835;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=22905,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458031.1;locus_tag=STY7866_RS20835;partial=true;product=alpha-glucosidase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001253.1 1 10956
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001253.1	RefSeq	region	1	10956	.	+	.	ID=NZ_CAAR01001253.1:1..10956;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001253.1	RefSeq	gene	484	663	.	-	.	ID=gene-STY7866_RS29330;Name=STY7866_RS29330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS29330
NZ_CAAR01001253.1	Protein Homology	CDS	484	663	.	-	0	ID=cds-WP_071525158.1;Parent=gene-STY7866_RS29330;Dbxref=Genbank:WP_071525158.1;Name=WP_071525158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518649.1;locus_tag=STY7866_RS29330;product=type VI secretion system protein;protein_id=WP_071525158.1;transl_table=11
NZ_CAAR01001253.1	RefSeq	gene	1013	1297	.	-	.	ID=gene-STY7866_RS26565;Name=STY7866_RS26565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26565
NZ_CAAR01001253.1	Protein Homology	CDS	1013	1297	.	-	0	ID=cds-WP_001681938.1;Parent=gene-STY7866_RS26565;Dbxref=Genbank:WP_001681938.1;Name=WP_001681938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727292.1;locus_tag=STY7866_RS26565;product=DUF4102 domain-containing protein;protein_id=WP_001681938.1;transl_table=11
NZ_CAAR01001253.1	RefSeq	gene	1458	1533	.	-	.	ID=gene-STY7866_RS20680;Name=STY7866_RS20680;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS20680
NZ_CAAR01001253.1	tRNAscan-SE	tRNA	1458	1533	.	-	.	ID=rna-STY7866_RS20680;Parent=gene-STY7866_RS20680;anticodon=(pos:complement(1498..1500));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS20680;product=tRNA-Phe
NZ_CAAR01001253.1	tRNAscan-SE	exon	1458	1533	.	-	.	ID=exon-STY7866_RS20680-1;Parent=rna-STY7866_RS20680;anticodon=(pos:complement(1498..1500));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS20680;product=tRNA-Phe
NZ_CAAR01001253.1	RefSeq	gene	1639	2346	.	-	.	ID=gene-STY7866_RS20685;Name=STY7866_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20685
NZ_CAAR01001253.1	Protein Homology	CDS	1639	2346	.	-	0	ID=cds-WP_000234466.1;Parent=gene-STY7866_RS20685;Dbxref=Genbank:WP_000234466.1;Name=WP_000234466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457507.1;locus_tag=STY7866_RS20685;product=DUF554 domain-containing protein;protein_id=WP_000234466.1;transl_table=11
NZ_CAAR01001253.1	RefSeq	pseudogene	2771	4894	.	+	.	ID=gene-STY7866_RS20695;Name=STY7866_RS20695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20695;pseudo=true
NZ_CAAR01001253.1	Protein Homology	CDS	2771	4894	.	+	0	ID=cds-STY7866_RS20695;Parent=gene-STY7866_RS20695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=STY7866_RS20695;product=ornithine decarboxylase;pseudo=true;transl_table=11
NZ_CAAR01001253.1	RefSeq	gene	4956	6212	.	-	.	ID=gene-STY7866_RS20700;Name=STY7866_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20700
NZ_CAAR01001253.1	Protein Homology	CDS	4956	6212	.	-	0	ID=cds-WP_001049802.1;Parent=gene-STY7866_RS20700;Dbxref=Genbank:WP_001049802.1;Name=WP_001049802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457506.1;locus_tag=STY7866_RS20700;product=nucleoside permease;protein_id=WP_001049802.1;transl_table=11
NZ_CAAR01001253.1	RefSeq	pseudogene	6429	7513	.	-	.	ID=gene-STY7866_RS20705;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=pseudogene;locus_tag=STY7866_RS20705;pseudo=true
NZ_CAAR01001253.1	Protein Homology	CDS	6429	7513	.	-	0	ID=cds-STY7866_RS20705;Parent=gene-STY7866_RS20705;Note=frameshifted;gbkey=CDS;gene=mltC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457505.1;locus_tag=STY7866_RS20705;product=membrane-bound lytic murein transglycosylase MltC;pseudo=true;transl_table=11
NZ_CAAR01001253.1	RefSeq	gene	7626	7901	.	-	.	ID=gene-STY7866_RS20710;Name=STY7866_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20710
NZ_CAAR01001253.1	Protein Homology	CDS	7626	7901	.	-	0	ID=cds-WP_000091706.1;Parent=gene-STY7866_RS20710;Dbxref=Genbank:WP_000091706.1;Name=WP_000091706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457504.1;locus_tag=STY7866_RS20710;product=oxidative damage protection protein;protein_id=WP_000091706.1;transl_table=11
NZ_CAAR01001253.1	RefSeq	pseudogene	7929	8980	.	-	.	ID=gene-STY7866_RS20715;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=pseudogene;locus_tag=STY7866_RS20715;pseudo=true
NZ_CAAR01001253.1	Protein Homology	CDS	7929	8980	.	-	0	ID=cds-STY7866_RS20715;Parent=gene-STY7866_RS20715;Note=frameshifted;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457503.1;locus_tag=STY7866_RS20715;product=A/G-specific adenine glycosylase;pseudo=true;transl_table=11
NZ_CAAR01001253.1	RefSeq	gene	9136	9855	.	+	.	ID=gene-STY7866_RS20720;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=STY7866_RS20720
NZ_CAAR01001253.1	Protein Homology	CDS	9136	9855	.	+	0	ID=cds-WP_000786887.1;Parent=gene-STY7866_RS20720;Dbxref=Genbank:WP_000786887.1;Name=WP_000786887.1;gbkey=CDS;gene=trmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457502.1;locus_tag=STY7866_RS20720;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786887.1;transl_table=11
NZ_CAAR01001253.1	RefSeq	gene	9855	10181	.	+	.	ID=gene-STY7866_RS20725;Name=STY7866_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20725
NZ_CAAR01001253.1	Protein Homology	CDS	9855	10181	.	+	0	ID=cds-WP_001107559.1;Parent=gene-STY7866_RS20725;Dbxref=Genbank:WP_001107559.1;Name=WP_001107559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457501.1;locus_tag=STY7866_RS20725;product=YggL family protein;protein_id=WP_001107559.1;transl_table=11
NZ_CAAR01001253.1	RefSeq	gene	10230	10949	.	+	.	ID=gene-STY7866_RS20730;Name=STY7866_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20730
NZ_CAAR01001253.1	Protein Homology	CDS	10230	10949	.	+	0	ID=cds-WP_000984827.1;Parent=gene-STY7866_RS20730;Dbxref=Genbank:WP_000984827.1;Name=WP_000984827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457500.1;locus_tag=STY7866_RS20730;product=DUF2884 domain-containing protein;protein_id=WP_000984827.1;transl_table=11
##sequence-region NZ_CAAR01001252.1 1 142
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001252.1	RefSeq	region	1	142	.	+	.	ID=NZ_CAAR01001252.1:1..142;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001251.1 1 9498
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001251.1	RefSeq	region	1	9498	.	+	.	ID=NZ_CAAR01001251.1:1..9498;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001251.1	RefSeq	pseudogene	1	989	.	-	.	ID=gene-STY7866_RS20635;Name=STY7866_RS20635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20635;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01001251.1	Protein Homology	CDS	1	989	.	-	0	ID=cds-STY7866_RS20635;Parent=gene-STY7866_RS20635;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454649.1;locus_tag=STY7866_RS20635;partial=true;product=arylsulfatase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01001251.1	RefSeq	pseudogene	1116	2368	.	-	.	ID=gene-STY7866_RS20640;Name=STY7866_RS20640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20640;pseudo=true
NZ_CAAR01001251.1	Protein Homology	CDS	1116	2368	.	-	0	ID=cds-STY7866_RS20640;Parent=gene-STY7866_RS20640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459042.1;locus_tag=STY7866_RS20640;product=IS1 family transposase;pseudo=true;transl_table=11
NZ_CAAR01001251.1	RefSeq	gene	2387	3577	.	-	.	ID=gene-STY7866_RS20645;Name=STY7866_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20645
NZ_CAAR01001251.1	Protein Homology	CDS	2387	3577	.	-	0	ID=cds-WP_000971147.1;Parent=gene-STY7866_RS20645;Dbxref=Genbank:WP_000971147.1;Name=WP_000971147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454647.1;locus_tag=STY7866_RS20645;product=anaerobic sulfatase maturase;protein_id=WP_000971147.1;transl_table=11
NZ_CAAR01001251.1	RefSeq	gene	3676	5169	.	-	.	ID=gene-STY7866_RS20650;Name=STY7866_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20650
NZ_CAAR01001251.1	Protein Homology	CDS	3676	5169	.	-	0	ID=cds-WP_000831876.1;Parent=gene-STY7866_RS20650;Dbxref=Genbank:WP_000831876.1;Name=WP_000831876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454646.1;locus_tag=STY7866_RS20650;product=sulfatase-like hydrolase/transferase;protein_id=WP_000831876.1;transl_table=11
NZ_CAAR01001251.1	RefSeq	gene	5763	6524	.	+	.	ID=gene-STY7866_RS20655;Name=STY7866_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20655
NZ_CAAR01001251.1	Protein Homology	CDS	5763	6524	.	+	0	ID=cds-WP_000791535.1;Parent=gene-STY7866_RS20655;Dbxref=Genbank:WP_000791535.1;Name=WP_000791535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454645.1;locus_tag=STY7866_RS20655;product=hypothetical protein;protein_id=WP_000791535.1;transl_table=11
NZ_CAAR01001251.1	RefSeq	gene	6623	8194	.	+	.	ID=gene-STY7866_RS20660;Name=STY7866_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20660
NZ_CAAR01001251.1	Protein Homology	CDS	6623	8194	.	+	0	ID=cds-WP_000262866.1;Parent=gene-STY7866_RS20660;Dbxref=Genbank:WP_000262866.1;Name=WP_000262866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454644.1;locus_tag=STY7866_RS20660;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_000262866.1;transl_table=11
NZ_CAAR01001251.1	RefSeq	gene	8240	9498	.	-	.	ID=gene-STY7866_RS20665;Name=STY7866_RS20665;end_range=9498,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20665;partial=true
NZ_CAAR01001251.1	Protein Homology	CDS	8240	9498	.	-	2	ID=cds-WP_000309497.1;Parent=gene-STY7866_RS20665;Dbxref=Genbank:WP_000309497.1;Name=WP_000309497.1;end_range=9498,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454643.1;locus_tag=STY7866_RS20665;partial=true;product=arylsulfatase;protein_id=WP_000309497.1;transl_table=11
##sequence-region NZ_CAAR01001250.1 1 9848
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001250.1	RefSeq	region	1	9848	.	+	.	ID=NZ_CAAR01001250.1:1..9848;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001250.1	RefSeq	gene	1	1512	.	+	.	ID=gene-STY7866_RS20580;Name=STY7866_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20580;partial=true;start_range=.,1
NZ_CAAR01001250.1	Protein Homology	CDS	1	1512	.	+	0	ID=cds-WP_000630831.1;Parent=gene-STY7866_RS20580;Dbxref=Genbank:WP_000630831.1;Name=WP_000630831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119118.1;locus_tag=STY7866_RS20580;partial=true;product=hypothetical protein;protein_id=WP_000630831.1;start_range=.,1;transl_table=11
NZ_CAAR01001250.1	RefSeq	pseudogene	1575	2095	.	+	.	ID=gene-STY7866_RS20585;Name=STY7866_RS20585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20585;pseudo=true
NZ_CAAR01001250.1	Protein Homology	CDS	1575	2095	.	+	0	ID=cds-STY7866_RS20585;Parent=gene-STY7866_RS20585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001775585.1;locus_tag=STY7866_RS20585;product=DUF2254 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01001250.1	RefSeq	pseudogene	2055	2258	.	-	.	ID=gene-STY7866_RS29320;Name=STY7866_RS29320;end_range=2258,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS29320;partial=true;pseudo=true
NZ_CAAR01001250.1	Protein Homology	CDS	2055	2258	.	-	0	ID=cds-STY7866_RS29320;Parent=gene-STY7866_RS29320;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2258,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013512832.1;locus_tag=STY7866_RS29320;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_CAAR01001250.1	RefSeq	pseudogene	2242	2661	.	+	.	ID=gene-STY7866_RS20590;Name=STY7866_RS20590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20590;partial=true;pseudo=true;start_range=.,2242
NZ_CAAR01001250.1	Protein Homology	CDS	2242	2661	.	+	0	ID=cds-STY7866_RS20590;Parent=gene-STY7866_RS20590;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238584.1;locus_tag=STY7866_RS20590;partial=true;product=cation diffusion facilitator family transporter;pseudo=true;start_range=.,2242;transl_table=11
NZ_CAAR01001250.1	RefSeq	gene	3211	3414	.	-	.	ID=gene-STY7866_RS20600;Name=STY7866_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20600
NZ_CAAR01001250.1	Protein Homology	CDS	3211	3414	.	-	0	ID=cds-WP_001766147.1;Parent=gene-STY7866_RS20600;Dbxref=Genbank:WP_001766147.1;Name=WP_001766147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766147.1;locus_tag=STY7866_RS20600;product=hypothetical protein;protein_id=WP_001766147.1;transl_table=11
NZ_CAAR01001250.1	RefSeq	gene	3572	4840	.	-	.	ID=gene-STY7866_RS20605;Name=STY7866_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20605
NZ_CAAR01001250.1	Protein Homology	CDS	3572	4840	.	-	0	ID=cds-WP_001219050.1;Parent=gene-STY7866_RS20605;Dbxref=Genbank:WP_001219050.1;Name=WP_001219050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008815333.1;locus_tag=STY7866_RS20605;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_001219050.1;transl_table=11
NZ_CAAR01001250.1	RefSeq	gene	5042	5126	.	-	.	ID=gene-STY7866_RS20610;Name=STY7866_RS20610;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS20610
NZ_CAAR01001250.1	tRNAscan-SE	tRNA	5042	5126	.	-	.	ID=rna-STY7866_RS20610;Parent=gene-STY7866_RS20610;anticodon=(pos:complement(5090..5092));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS20610;product=tRNA-Leu
NZ_CAAR01001250.1	tRNAscan-SE	exon	5042	5126	.	-	.	ID=exon-STY7866_RS20610-1;Parent=rna-STY7866_RS20610;anticodon=(pos:complement(5090..5092));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS20610;product=tRNA-Leu
NZ_CAAR01001250.1	RefSeq	gene	5349	6839	.	+	.	ID=gene-STY7866_RS20615;Name=STY7866_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20615
NZ_CAAR01001250.1	Protein Homology	CDS	5349	6839	.	+	0	ID=cds-WP_000152561.1;Parent=gene-STY7866_RS20615;Dbxref=Genbank:WP_000152561.1;Name=WP_000152561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000152571.1;locus_tag=STY7866_RS20615;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_000152561.1;transl_table=11
NZ_CAAR01001250.1	RefSeq	gene	6903	7901	.	+	.	ID=gene-STY7866_RS20620;Name=STY7866_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20620
NZ_CAAR01001250.1	Protein Homology	CDS	6903	7901	.	+	0	ID=cds-WP_001244064.1;Parent=gene-STY7866_RS20620;Dbxref=Genbank:WP_001244064.1;Name=WP_001244064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458898.1;locus_tag=STY7866_RS20620;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_001244064.1;transl_table=11
NZ_CAAR01001250.1	RefSeq	gene	8107	9189	.	-	.	ID=gene-STY7866_RS20625;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=STY7866_RS20625
NZ_CAAR01001250.1	Protein Homology	CDS	8107	9189	.	-	0	ID=cds-WP_001182241.1;Parent=gene-STY7866_RS20625;Dbxref=Genbank:WP_001182241.1;Name=WP_001182241.1;gbkey=CDS;gene=lptG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458897.1;locus_tag=STY7866_RS20625;product=LPS export ABC transporter permease LptG;protein_id=WP_001182241.1;transl_table=11
NZ_CAAR01001250.1	RefSeq	gene	9189	9848	.	-	.	ID=gene-STY7866_RS20630;Name=STY7866_RS20630;end_range=9848,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20630;partial=true
NZ_CAAR01001250.1	Protein Homology	CDS	9189	9848	.	-	0	ID=cds-WP_000300617.1;Parent=gene-STY7866_RS20630;Dbxref=Genbank:WP_000300617.1;Name=WP_000300617.1;end_range=9848,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458896.1;locus_tag=STY7866_RS20630;partial=true;product=LptF/LptG family permease;protein_id=WP_000300617.1;transl_table=11
##sequence-region NZ_CAAR01001249.1 1 3644
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001249.1	RefSeq	region	1	3644	.	+	.	ID=NZ_CAAR01001249.1:1..3644;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001249.1	RefSeq	gene	1	407	.	-	.	ID=gene-STY7866_RS20560;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=STY7866_RS20560;partial=true;start_range=.,1
NZ_CAAR01001249.1	Protein Homology	CDS	1	407	.	-	0	ID=cds-WP_000833186.1;Parent=gene-STY7866_RS20560;Dbxref=Genbank:WP_000833186.1;Name=WP_000833186.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455594.1;locus_tag=STY7866_RS20560;partial=true;product=hydroxyisourate hydrolase;protein_id=WP_000833186.1;start_range=.,1;transl_table=11
NZ_CAAR01001249.1	RefSeq	gene	543	1223	.	+	.	ID=gene-STY7866_RS20565;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=STY7866_RS20565
NZ_CAAR01001249.1	Protein Homology	CDS	543	1223	.	+	0	ID=cds-WP_000698211.1;Parent=gene-STY7866_RS20565;Dbxref=Genbank:WP_000698211.1;Name=WP_000698211.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=STY7866_RS20565;product=response regulator transcription factor HprR;protein_id=WP_000698211.1;transl_table=11
NZ_CAAR01001249.1	RefSeq	gene	1216	2580	.	+	.	ID=gene-STY7866_RS20570;Name=STY7866_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20570
NZ_CAAR01001249.1	Protein Homology	CDS	1216	2580	.	+	0	ID=cds-WP_000240036.1;Parent=gene-STY7866_RS20570;Dbxref=Genbank:WP_000240036.1;Name=WP_000240036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455592.1;locus_tag=STY7866_RS20570;product=heavy metal sensor histidine kinase;protein_id=WP_000240036.1;transl_table=11
NZ_CAAR01001249.1	RefSeq	gene	2753	3644	.	+	.	ID=gene-STY7866_RS20575;Name=STY7866_RS20575;end_range=3644,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20575;partial=true
NZ_CAAR01001249.1	Protein Homology	CDS	2753	3644	.	+	0	ID=cds-WP_000760237.1;Parent=gene-STY7866_RS20575;Dbxref=Genbank:WP_000760237.1;Name=WP_000760237.1;end_range=3644,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455591.1;locus_tag=STY7866_RS20575;partial=true;product=C69 family dipeptidase;protein_id=WP_000760237.1;transl_table=11
##sequence-region NZ_CAAR01001248.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001248.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001248.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001247.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001247.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01001247.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001246.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001246.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001246.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001245.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001245.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01001245.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001244.1 1 5230
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001244.1	RefSeq	region	1	5230	.	+	.	ID=NZ_CAAR01001244.1:1..5230;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001244.1	RefSeq	gene	1	525	.	-	.	ID=gene-STY7866_RS20530;Name=STY7866_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20530;partial=true;start_range=.,1
NZ_CAAR01001244.1	Protein Homology	CDS	1	525	.	-	0	ID=cds-WP_000749188.1;Parent=gene-STY7866_RS20530;Dbxref=Genbank:WP_000749188.1;Name=WP_000749188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455612.1;locus_tag=STY7866_RS20530;partial=true;product=histidine-type phosphatase;protein_id=WP_000749188.1;start_range=.,1;transl_table=11
NZ_CAAR01001244.1	RefSeq	gene	658	1164	.	-	.	ID=gene-STY7866_RS20535;Name=STY7866_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20535
NZ_CAAR01001244.1	Protein Homology	CDS	658	1164	.	-	0	ID=cds-WP_000907521.1;Parent=gene-STY7866_RS20535;Dbxref=Genbank:WP_000907521.1;Name=WP_000907521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455611.1;locus_tag=STY7866_RS20535;product=protein disulfide oxidoreductase;protein_id=WP_000907521.1;transl_table=11
NZ_CAAR01001244.1	RefSeq	gene	1154	1777	.	-	.	ID=gene-STY7866_RS20540;Name=STY7866_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20540
NZ_CAAR01001244.1	Protein Homology	CDS	1154	1777	.	-	0	ID=cds-WP_000876697.1;Parent=gene-STY7866_RS20540;Dbxref=Genbank:WP_000876697.1;Name=WP_000876697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455610.1;locus_tag=STY7866_RS20540;product=thioredoxin domain-containing protein;protein_id=WP_000876697.1;transl_table=11
NZ_CAAR01001244.1	RefSeq	gene	1774	3660	.	-	.	ID=gene-STY7866_RS20545;Name=STY7866_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20545
NZ_CAAR01001244.1	Protein Homology	CDS	1774	3660	.	-	0	ID=cds-WP_000972986.1;Parent=gene-STY7866_RS20545;Dbxref=Genbank:WP_000972986.1;Name=WP_000972986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455609.1;locus_tag=STY7866_RS20545;product=DUF255 domain-containing protein;protein_id=WP_000972986.1;transl_table=11
NZ_CAAR01001244.1	RefSeq	gene	3709	4071	.	-	.	ID=gene-STY7866_RS20550;Name=STY7866_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20550
NZ_CAAR01001244.1	Protein Homology	CDS	3709	4071	.	-	0	ID=cds-WP_001118904.1;Parent=gene-STY7866_RS20550;Dbxref=Genbank:WP_001118904.1;Name=WP_001118904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455608.1;locus_tag=STY7866_RS20550;product=copper resistance protein;protein_id=WP_001118904.1;transl_table=11
NZ_CAAR01001244.1	RefSeq	gene	4307	5227	.	+	.	ID=gene-STY7866_RS20555;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=STY7866_RS20555
NZ_CAAR01001244.1	Protein Homology	CDS	4307	5227	.	+	0	ID=cds-WP_000420603.1;Parent=gene-STY7866_RS20555;Dbxref=Genbank:WP_000420603.1;Name=WP_000420603.1;gbkey=CDS;gene=cbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455607.1;locus_tag=STY7866_RS20555;product=curved DNA-binding protein;protein_id=WP_000420603.1;transl_table=11
##sequence-region NZ_CAAR01001243.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001243.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01001243.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001242.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001242.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001242.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001241.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001241.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001241.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001240.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001240.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001240.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001239.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001239.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01001239.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001238.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001238.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01001238.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001237.1 1 119
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001237.1	RefSeq	region	1	119	.	+	.	ID=NZ_CAAR01001237.1:1..119;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001236.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001236.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001236.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001235.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001235.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001235.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001234.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001234.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01001234.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001233.1 1 124
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001233.1	RefSeq	region	1	124	.	+	.	ID=NZ_CAAR01001233.1:1..124;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001232.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001232.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001232.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001231.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001231.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01001231.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001230.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001230.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01001230.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001229.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001229.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01001229.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001228.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001228.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001228.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001227.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001227.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01001227.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001226.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001226.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01001226.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001225.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001225.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001225.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001224.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001224.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01001224.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001223.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001223.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01001223.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001222.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001222.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01001222.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001221.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001221.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001221.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001220.1 1 116
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001220.1	RefSeq	region	1	116	.	+	.	ID=NZ_CAAR01001220.1:1..116;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001219.1 1 141
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001219.1	RefSeq	region	1	141	.	+	.	ID=NZ_CAAR01001219.1:1..141;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001218.1 1 132
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001218.1	RefSeq	region	1	132	.	+	.	ID=NZ_CAAR01001218.1:1..132;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001217.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001217.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01001217.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001216.1 1 116
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001216.1	RefSeq	region	1	116	.	+	.	ID=NZ_CAAR01001216.1:1..116;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001215.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001215.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001215.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001214.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001214.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001214.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001213.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001213.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01001213.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001212.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001212.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01001212.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001211.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001211.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001211.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001210.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001210.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01001210.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001209.1 1 98
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001209.1	RefSeq	region	1	98	.	+	.	ID=NZ_CAAR01001209.1:1..98;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001208.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001208.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01001208.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001207.1 1 4645
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001207.1	RefSeq	region	1	4645	.	+	.	ID=NZ_CAAR01001207.1:1..4645;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001207.1	RefSeq	gene	119	631	.	-	.	ID=gene-STY7866_RS20500;Name=STY7866_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20500
NZ_CAAR01001207.1	Protein Homology	CDS	119	631	.	-	0	ID=cds-WP_001195558.1;Parent=gene-STY7866_RS20500;Dbxref=Genbank:WP_001195558.1;Name=WP_001195558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455595.1;locus_tag=STY7866_RS20500;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001195558.1;transl_table=11
NZ_CAAR01001207.1	RefSeq	gene	649	2211	.	-	.	ID=gene-STY7866_RS20505;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=STY7866_RS20505
NZ_CAAR01001207.1	Protein Homology	CDS	649	2211	.	-	0	ID=cds-WP_000801496.1;Parent=gene-STY7866_RS20505;Dbxref=Genbank:WP_000801496.1;Name=WP_000801496.1;gbkey=CDS;gene=hpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=STY7866_RS20505;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_000801496.1;transl_table=11
NZ_CAAR01001207.1	RefSeq	gene	2430	2870	.	-	.	ID=gene-STY7866_RS20510;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=STY7866_RS20510
NZ_CAAR01001207.1	Protein Homology	CDS	2430	2870	.	-	0	ID=cds-WP_000543921.1;Parent=gene-STY7866_RS20510;Dbxref=Genbank:WP_000543921.1;Name=WP_000543921.1;gbkey=CDS;gene=hpaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455597.1;locus_tag=STY7866_RS20510;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543921.1;transl_table=11
NZ_CAAR01001207.1	RefSeq	gene	3145	4434	.	+	.	ID=gene-STY7866_RS20515;Name=STY7866_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20515
NZ_CAAR01001207.1	Protein Homology	CDS	3145	4434	.	+	0	ID=cds-WP_000679210.1;Parent=gene-STY7866_RS20515;Dbxref=Genbank:WP_000679210.1;Name=WP_000679210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455598.1;locus_tag=STY7866_RS20515;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_000679210.1;transl_table=11
NZ_CAAR01001207.1	RefSeq	gene	4431	4645	.	+	.	ID=gene-STY7866_RS20520;Name=STY7866_RS20520;end_range=4645,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20520;partial=true
NZ_CAAR01001207.1	Protein Homology	CDS	4431	4645	.	+	0	ID=cds-WP_000723520.1;Parent=gene-STY7866_RS20520;Dbxref=Genbank:WP_000723520.1;Name=WP_000723520.1;end_range=4645,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=STY7866_RS20520;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_000723520.1;transl_table=11
##sequence-region NZ_CAAR01001206.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001206.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01001206.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001205.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001205.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01001205.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001204.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001204.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001204.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001203.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001203.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001203.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001202.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001202.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001202.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001201.1 1 121
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001201.1	RefSeq	region	1	121	.	+	.	ID=NZ_CAAR01001201.1:1..121;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001200.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001200.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01001200.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001199.1 1 127
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001199.1	RefSeq	region	1	127	.	+	.	ID=NZ_CAAR01001199.1:1..127;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001198.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001198.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01001198.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001197.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001197.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01001197.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001196.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001196.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01001196.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001195.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001195.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01001195.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001194.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001194.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001194.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001193.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001193.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01001193.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001192.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001192.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001192.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001191.1 1 114
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001191.1	RefSeq	region	1	114	.	+	.	ID=NZ_CAAR01001191.1:1..114;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001190.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001190.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001190.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001189.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001189.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01001189.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001188.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001188.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01001188.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001187.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001187.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01001187.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001186.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001186.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001186.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001185.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001185.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01001185.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001184.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001184.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01001184.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001183.1 1 127
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001183.1	RefSeq	region	1	127	.	+	.	ID=NZ_CAAR01001183.1:1..127;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001182.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001182.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01001182.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001181.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001181.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01001181.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001180.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001180.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001180.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001179.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001179.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01001179.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001178.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001178.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01001178.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001177.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001177.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001177.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001176.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001176.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01001176.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001175.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001175.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01001175.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001174.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001174.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001174.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001173.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001173.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001173.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001172.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001172.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01001172.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001171.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001171.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001171.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001170.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001170.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001170.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001169.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001169.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01001169.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001168.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001168.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01001168.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001167.1 1 137
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001167.1	RefSeq	region	1	137	.	+	.	ID=NZ_CAAR01001167.1:1..137;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001166.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001166.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001166.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001165.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001165.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01001165.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001164.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001164.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01001164.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001163.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001163.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001163.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001162.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001162.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01001162.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001161.1 1 98
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001161.1	RefSeq	region	1	98	.	+	.	ID=NZ_CAAR01001161.1:1..98;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001160.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001160.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01001160.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001159.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001159.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01001159.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001158.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001158.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001158.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001157.1 1 98
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001157.1	RefSeq	region	1	98	.	+	.	ID=NZ_CAAR01001157.1:1..98;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001156.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001156.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01001156.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001155.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001155.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01001155.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001154.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001154.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001154.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001153.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001153.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01001153.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001152.1 1 126
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001152.1	RefSeq	region	1	126	.	+	.	ID=NZ_CAAR01001152.1:1..126;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001151.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001151.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01001151.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001150.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001150.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01001150.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001149.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001149.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001149.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001148.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001148.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01001148.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001147.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001147.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001147.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001146.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001146.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001146.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001145.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001145.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01001145.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001144.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001144.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001144.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001143.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001143.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01001143.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001142.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001142.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001142.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001141.1 1 99
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001141.1	RefSeq	region	1	99	.	+	.	ID=NZ_CAAR01001141.1:1..99;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001140.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001140.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01001140.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001139.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001139.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001139.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001138.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001138.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01001138.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001137.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001137.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01001137.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001136.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001136.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001136.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001135.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001135.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01001135.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001134.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001134.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01001134.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001133.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001133.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01001133.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001132.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001132.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01001132.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001131.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001131.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01001131.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001130.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001130.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01001130.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001129.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001129.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01001129.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001128.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001128.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01001128.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001127.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001127.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01001127.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001126.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001126.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001126.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001125.1 1 159
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001125.1	RefSeq	region	1	159	.	+	.	ID=NZ_CAAR01001125.1:1..159;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001124.1 1 117
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001124.1	RefSeq	region	1	117	.	+	.	ID=NZ_CAAR01001124.1:1..117;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001123.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001123.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01001123.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001122.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001122.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01001122.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001121.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001121.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01001121.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001120.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001120.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01001120.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001119.1 1 98
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001119.1	RefSeq	region	1	98	.	+	.	ID=NZ_CAAR01001119.1:1..98;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001118.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001118.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01001118.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001117.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001117.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01001117.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001116.1 1 114
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001116.1	RefSeq	region	1	114	.	+	.	ID=NZ_CAAR01001116.1:1..114;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001115.1 1 122
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001115.1	RefSeq	region	1	122	.	+	.	ID=NZ_CAAR01001115.1:1..122;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001114.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001114.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01001114.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001113.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001113.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001113.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001112.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001112.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01001112.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001111.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001111.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01001111.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001110.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001110.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01001110.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001109.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001109.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01001109.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001108.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001108.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001108.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001107.1 1 116
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001107.1	RefSeq	region	1	116	.	+	.	ID=NZ_CAAR01001107.1:1..116;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001106.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001106.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001106.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001105.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001105.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001105.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001104.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001104.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01001104.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001103.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001103.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01001103.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001102.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001102.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01001102.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001101.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001101.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01001101.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001100.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001100.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01001100.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001099.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001099.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001099.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001098.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001098.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001098.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001097.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001097.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01001097.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001096.1 1 97
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001096.1	RefSeq	region	1	97	.	+	.	ID=NZ_CAAR01001096.1:1..97;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001095.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001095.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01001095.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001094.1 1 120
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001094.1	RefSeq	region	1	120	.	+	.	ID=NZ_CAAR01001094.1:1..120;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001093.1 1 119
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001093.1	RefSeq	region	1	119	.	+	.	ID=NZ_CAAR01001093.1:1..119;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001092.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001092.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01001092.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001091.1 1 124
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001091.1	RefSeq	region	1	124	.	+	.	ID=NZ_CAAR01001091.1:1..124;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001090.1 1 116
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001090.1	RefSeq	region	1	116	.	+	.	ID=NZ_CAAR01001090.1:1..116;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001089.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001089.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01001089.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001088.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001088.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01001088.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001087.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001087.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001087.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001086.1 1 116
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001086.1	RefSeq	region	1	116	.	+	.	ID=NZ_CAAR01001086.1:1..116;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001085.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001085.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001085.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001084.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001084.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01001084.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001083.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001083.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01001083.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001082.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001082.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01001082.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001081.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001081.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01001081.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001080.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001080.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001080.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001079.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001079.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001079.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001078.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001078.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01001078.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001077.1 1 114
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001077.1	RefSeq	region	1	114	.	+	.	ID=NZ_CAAR01001077.1:1..114;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001076.1 1 130
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001076.1	RefSeq	region	1	130	.	+	.	ID=NZ_CAAR01001076.1:1..130;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001075.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001075.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01001075.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001074.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001074.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01001074.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001073.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001073.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001073.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001072.1 1 99
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001072.1	RefSeq	region	1	99	.	+	.	ID=NZ_CAAR01001072.1:1..99;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001071.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001071.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001071.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001070.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001070.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01001070.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001069.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001069.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01001069.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001068.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001068.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01001068.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001067.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001067.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001067.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001066.1 1 137
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001066.1	RefSeq	region	1	137	.	+	.	ID=NZ_CAAR01001066.1:1..137;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001065.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001065.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01001065.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001064.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001064.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001064.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001063.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001063.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01001063.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001062.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001062.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01001062.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001061.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001061.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001061.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001060.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001060.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001060.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001059.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001059.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01001059.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001058.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001058.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01001058.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001057.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001057.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001057.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001056.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001056.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01001056.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001055.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001055.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01001055.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001054.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001054.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01001054.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001053.1 1 118
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001053.1	RefSeq	region	1	118	.	+	.	ID=NZ_CAAR01001053.1:1..118;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001052.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001052.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01001052.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001051.1 1 99
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001051.1	RefSeq	region	1	99	.	+	.	ID=NZ_CAAR01001051.1:1..99;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001050.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001050.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001050.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001049.1 1 119
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001049.1	RefSeq	region	1	119	.	+	.	ID=NZ_CAAR01001049.1:1..119;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001048.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001048.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01001048.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001047.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001047.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01001047.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001046.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001046.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01001046.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001045.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001045.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01001045.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001044.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001044.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01001044.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001043.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001043.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01001043.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001042.1 1 117
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001042.1	RefSeq	region	1	117	.	+	.	ID=NZ_CAAR01001042.1:1..117;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001041.1 1 120
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001041.1	RefSeq	region	1	120	.	+	.	ID=NZ_CAAR01001041.1:1..120;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001040.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001040.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01001040.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001039.1 1 154
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001039.1	RefSeq	region	1	154	.	+	.	ID=NZ_CAAR01001039.1:1..154;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001038.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001038.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01001038.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001037.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001037.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001037.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001036.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001036.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001036.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001035.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001035.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01001035.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001034.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001034.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001034.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001033.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001033.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01001033.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001032.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001032.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001032.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001031.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001031.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001031.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001030.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001030.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01001030.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001029.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001029.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01001029.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001028.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001028.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01001028.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001027.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001027.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01001027.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001026.1 1 6307
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001026.1	RefSeq	region	1	6307	.	+	.	ID=NZ_CAAR01001026.1:1..6307;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01001026.1	RefSeq	gene	34	1806	.	-	.	ID=gene-STY7866_RS20440;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=STY7866_RS20440
NZ_CAAR01001026.1	Protein Homology	CDS	34	1806	.	-	0	ID=cds-WP_001258634.1;Parent=gene-STY7866_RS20440;Dbxref=Genbank:WP_001258634.1;Name=WP_001258634.1;gbkey=CDS;gene=aspS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456468.1;locus_tag=STY7866_RS20440;product=aspartate--tRNA ligase;protein_id=WP_001258634.1;transl_table=11
NZ_CAAR01001026.1	RefSeq	gene	2131	2697	.	+	.	ID=gene-STY7866_RS20445;Name=STY7866_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20445
NZ_CAAR01001026.1	Protein Homology	CDS	2131	2697	.	+	0	ID=cds-WP_000916144.1;Parent=gene-STY7866_RS20445;Dbxref=Genbank:WP_000916144.1;Name=WP_000916144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456469.1;locus_tag=STY7866_RS20445;product=hydrolase;protein_id=WP_000916144.1;transl_table=11
NZ_CAAR01001026.1	RefSeq	gene	2694	3512	.	+	.	ID=gene-STY7866_RS20450;Name=STY7866_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20450
NZ_CAAR01001026.1	Protein Homology	CDS	2694	3512	.	+	0	ID=cds-WP_000639226.1;Parent=gene-STY7866_RS20450;Dbxref=Genbank:WP_000639226.1;Name=WP_000639226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456470.1;locus_tag=STY7866_RS20450;product=DUF72 domain-containing protein;protein_id=WP_000639226.1;transl_table=11
NZ_CAAR01001026.1	RefSeq	gene	3565	3960	.	+	.	ID=gene-STY7866_RS20455;Name=STY7866_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20455
NZ_CAAR01001026.1	Protein Homology	CDS	3565	3960	.	+	0	ID=cds-WP_000252975.1;Parent=gene-STY7866_RS20455;Dbxref=Genbank:WP_000252975.1;Name=WP_000252975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456471.1;locus_tag=STY7866_RS20455;product=membrane protein;protein_id=WP_000252975.1;transl_table=11
NZ_CAAR01001026.1	RefSeq	gene	3921	4745	.	+	.	ID=gene-STY7866_RS20460;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=STY7866_RS20460
NZ_CAAR01001026.1	Protein Homology	CDS	3921	4745	.	+	0	ID=cds-WP_151260016.1;Parent=gene-STY7866_RS20460;Dbxref=Genbank:WP_151260016.1;Name=WP_151260016.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003833849.1;locus_tag=STY7866_RS20460;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_151260016.1;transl_table=11
NZ_CAAR01001026.1	RefSeq	gene	4742	5713	.	+	.	ID=gene-STY7866_RS20465;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=STY7866_RS20465
NZ_CAAR01001026.1	Protein Homology	CDS	4742	5713	.	+	0	ID=cds-WP_000569029.1;Parent=gene-STY7866_RS20465;Dbxref=Genbank:WP_000569029.1;Name=WP_000569029.1;gbkey=CDS;gene=cmoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456473.1;locus_tag=STY7866_RS20465;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_000569029.1;transl_table=11
NZ_CAAR01001026.1	RefSeq	pseudogene	5917	6307	.	-	.	ID=gene-STY7866_RS20470;Name=STY7866_RS20470;end_range=6307,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20470;partial=true;pseudo=true
NZ_CAAR01001026.1	Protein Homology	CDS	5917	6307	.	-	1	ID=cds-STY7866_RS20470;Parent=gene-STY7866_RS20470;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6307,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456474.1;locus_tag=STY7866_RS20470;partial=true;product=copper homeostasis protein CutC;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01001025.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001025.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01001025.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001024.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001024.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01001024.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001023.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001023.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01001023.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001022.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001022.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01001022.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001021.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001021.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001021.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001020.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001020.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01001020.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001019.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001019.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01001019.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001018.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001018.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01001018.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001017.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001017.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001017.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001016.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001016.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01001016.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001015.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001015.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01001015.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001014.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001014.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001014.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001013.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001013.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01001013.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001012.1 1 114
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001012.1	RefSeq	region	1	114	.	+	.	ID=NZ_CAAR01001012.1:1..114;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001011.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001011.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01001011.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001010.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001010.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001010.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001009.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001009.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01001009.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001008.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001008.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01001008.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001007.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001007.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01001007.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001006.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001006.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01001006.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001005.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001005.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01001005.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001004.1 1 118
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001004.1	RefSeq	region	1	118	.	+	.	ID=NZ_CAAR01001004.1:1..118;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001003.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001003.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01001003.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001002.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001002.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01001002.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001001.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001001.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01001001.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01001000.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01001000.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01001000.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000999.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000999.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000999.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000998.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000998.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000998.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000997.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000997.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01000997.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000996.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000996.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000996.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000995.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000995.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000995.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000994.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000994.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01000994.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000993.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000993.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01000993.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000992.1 1 116
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000992.1	RefSeq	region	1	116	.	+	.	ID=NZ_CAAR01000992.1:1..116;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000991.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000991.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000991.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000990.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000990.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01000990.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000989.1 1 130
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000989.1	RefSeq	region	1	130	.	+	.	ID=NZ_CAAR01000989.1:1..130;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000988.1 1 141
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000988.1	RefSeq	region	1	141	.	+	.	ID=NZ_CAAR01000988.1:1..141;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000987.1 1 126
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000987.1	RefSeq	region	1	126	.	+	.	ID=NZ_CAAR01000987.1:1..126;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000986.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000986.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01000986.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000985.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000985.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01000985.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000984.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000984.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01000984.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000983.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000983.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01000983.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000982.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000982.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01000982.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000981.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000981.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01000981.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000980.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000980.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01000980.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000979.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000979.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000979.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000978.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000978.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000978.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000977.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000977.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000977.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000976.1 1 116
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000976.1	RefSeq	region	1	116	.	+	.	ID=NZ_CAAR01000976.1:1..116;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000975.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000975.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000975.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000974.1 1 118
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000974.1	RefSeq	region	1	118	.	+	.	ID=NZ_CAAR01000974.1:1..118;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000973.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000973.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000973.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000972.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000972.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000972.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000971.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000971.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01000971.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000970.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000970.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01000970.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000969.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000969.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000969.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000968.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000968.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000968.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000967.1 1 99
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000967.1	RefSeq	region	1	99	.	+	.	ID=NZ_CAAR01000967.1:1..99;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000966.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000966.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000966.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000965.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000965.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01000965.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000964.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000964.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01000964.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000963.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000963.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01000963.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000962.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000962.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000962.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000961.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000961.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000961.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000960.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000960.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000960.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000959.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000959.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01000959.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000958.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000958.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000958.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000957.1 1 98
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000957.1	RefSeq	region	1	98	.	+	.	ID=NZ_CAAR01000957.1:1..98;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000956.1 1 99
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000956.1	RefSeq	region	1	99	.	+	.	ID=NZ_CAAR01000956.1:1..99;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000955.1 1 117
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000955.1	RefSeq	region	1	117	.	+	.	ID=NZ_CAAR01000955.1:1..117;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000954.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000954.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01000954.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000953.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000953.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000953.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000952.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000952.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000952.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000951.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000951.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01000951.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000950.1 1 119
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000950.1	RefSeq	region	1	119	.	+	.	ID=NZ_CAAR01000950.1:1..119;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000949.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000949.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000949.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000948.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000948.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000948.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000947.1 1 122
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000947.1	RefSeq	region	1	122	.	+	.	ID=NZ_CAAR01000947.1:1..122;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000946.1 1 128
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000946.1	RefSeq	region	1	128	.	+	.	ID=NZ_CAAR01000946.1:1..128;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000945.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000945.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000945.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000944.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000944.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01000944.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000943.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000943.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000943.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000942.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000942.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000942.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000941.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000941.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000941.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000940.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000940.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01000940.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000939.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000939.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01000939.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000938.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000938.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000938.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000937.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000937.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000937.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000936.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000936.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000936.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000935.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000935.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000935.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000934.1 1 139
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000934.1	RefSeq	region	1	139	.	+	.	ID=NZ_CAAR01000934.1:1..139;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000933.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000933.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000933.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000932.1 1 120
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000932.1	RefSeq	region	1	120	.	+	.	ID=NZ_CAAR01000932.1:1..120;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000931.1 1 116
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000931.1	RefSeq	region	1	116	.	+	.	ID=NZ_CAAR01000931.1:1..116;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000930.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000930.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01000930.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000929.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000929.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01000929.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000928.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000928.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000928.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000927.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000927.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01000927.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000926.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000926.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000926.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000925.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000925.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01000925.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000924.1 1 119
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000924.1	RefSeq	region	1	119	.	+	.	ID=NZ_CAAR01000924.1:1..119;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000923.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000923.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01000923.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000922.1 1 192
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000922.1	RefSeq	region	1	192	.	+	.	ID=NZ_CAAR01000922.1:1..192;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000921.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000921.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000921.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000920.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000920.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000920.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000919.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000919.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01000919.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000918.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000918.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000918.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000917.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000917.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000917.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000916.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000916.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000916.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000915.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000915.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01000915.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000914.1 1 117
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000914.1	RefSeq	region	1	117	.	+	.	ID=NZ_CAAR01000914.1:1..117;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000913.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000913.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000913.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000912.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000912.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01000912.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000911.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000911.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01000911.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000910.1 1 114
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000910.1	RefSeq	region	1	114	.	+	.	ID=NZ_CAAR01000910.1:1..114;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000909.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000909.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000909.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000908.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000908.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01000908.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000907.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000907.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01000907.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000906.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000906.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000906.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000905.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000905.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000905.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000904.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000904.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01000904.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000903.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000903.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000903.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000902.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000902.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000902.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000901.1 1 117
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000901.1	RefSeq	region	1	117	.	+	.	ID=NZ_CAAR01000901.1:1..117;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000900.1 1 135
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000900.1	RefSeq	region	1	135	.	+	.	ID=NZ_CAAR01000900.1:1..135;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000899.1 1 114
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000899.1	RefSeq	region	1	114	.	+	.	ID=NZ_CAAR01000899.1:1..114;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000898.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000898.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000898.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000897.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000897.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01000897.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000896.1 1 130
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000896.1	RefSeq	region	1	130	.	+	.	ID=NZ_CAAR01000896.1:1..130;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000895.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000895.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01000895.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000894.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000894.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000894.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000893.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000893.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000893.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000892.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000892.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01000892.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000891.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000891.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01000891.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000890.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000890.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000890.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000889.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000889.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000889.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000888.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000888.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000888.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000887.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000887.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01000887.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000886.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000886.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000886.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000885.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000885.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01000885.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000884.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000884.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000884.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000883.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000883.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01000883.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000882.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000882.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000882.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000881.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000881.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000881.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000880.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000880.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000880.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000879.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000879.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000879.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000878.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000878.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01000878.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000877.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000877.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01000877.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000876.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000876.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01000876.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000875.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000875.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000875.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000874.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000874.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01000874.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000873.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000873.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000873.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000872.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000872.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01000872.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000871.1 1 121
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000871.1	RefSeq	region	1	121	.	+	.	ID=NZ_CAAR01000871.1:1..121;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000870.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000870.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000870.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000869.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000869.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01000869.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000868.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000868.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01000868.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000867.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000867.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01000867.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000866.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000866.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01000866.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000865.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000865.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01000865.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000864.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000864.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01000864.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000863.1 1 128
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000863.1	RefSeq	region	1	128	.	+	.	ID=NZ_CAAR01000863.1:1..128;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000862.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000862.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000862.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000861.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000861.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01000861.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000860.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000860.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000860.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000859.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000859.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000859.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000858.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000858.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000858.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000857.1 1 118
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000857.1	RefSeq	region	1	118	.	+	.	ID=NZ_CAAR01000857.1:1..118;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000856.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000856.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000856.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000855.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000855.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01000855.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000854.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000854.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000854.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000853.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000853.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000853.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000852.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000852.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01000852.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000851.1 1 129
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000851.1	RefSeq	region	1	129	.	+	.	ID=NZ_CAAR01000851.1:1..129;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000850.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000850.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000850.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000849.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000849.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01000849.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000848.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000848.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01000848.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000847.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000847.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01000847.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000846.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000846.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01000846.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000845.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000845.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01000845.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000844.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000844.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000844.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000843.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000843.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000843.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000842.1 1 121
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000842.1	RefSeq	region	1	121	.	+	.	ID=NZ_CAAR01000842.1:1..121;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000841.1 1 114
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000841.1	RefSeq	region	1	114	.	+	.	ID=NZ_CAAR01000841.1:1..114;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000840.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000840.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01000840.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000839.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000839.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000839.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000839.1	RefSeq	gene	8	106	.	-	.	ID=gene-STY7866_RS28265;Name=STY7866_RS28265;end_range=106,.;gbkey=Gene;gene_biotype=ncRNA;locus_tag=STY7866_RS28265;partial=true
NZ_CAAR01000839.1	cmsearch	ncRNA	8	106	.	-	.	ID=rna-STY7866_RS28265;Parent=gene-STY7866_RS28265;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;end_range=106,.;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS28265;partial=true;product=RtT sRNA
NZ_CAAR01000839.1	cmsearch	exon	8	106	.	-	.	ID=exon-STY7866_RS28265-1;Parent=rna-STY7866_RS28265;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;end_range=106,.;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS28265;partial=true;product=RtT sRNA
##sequence-region NZ_CAAR01000838.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000838.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000838.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000837.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000837.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01000837.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000836.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000836.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000836.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000835.1 1 203
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000835.1	RefSeq	region	1	203	.	+	.	ID=NZ_CAAR01000835.1:1..203;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000835.1	RefSeq	pseudogene	20	203	.	-	.	ID=gene-STY7866_RS20390;Name=STY7866_RS20390;end_range=203,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20390;partial=true;pseudo=true
NZ_CAAR01000835.1	Protein Homology	CDS	20	203	.	-	1	ID=cds-STY7866_RS20390;Parent=gene-STY7866_RS20390;Note=regulates expression of genes involved in L-fucose utilization%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=203,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457374.1;locus_tag=STY7866_RS20390;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000834.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000834.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01000834.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000833.1 1 114
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000833.1	RefSeq	region	1	114	.	+	.	ID=NZ_CAAR01000833.1:1..114;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000832.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000832.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01000832.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000831.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000831.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000831.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000830.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000830.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01000830.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000829.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000829.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01000829.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000828.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000828.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000828.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000827.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000827.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01000827.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000826.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000826.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000826.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000825.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000825.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01000825.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000824.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000824.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000824.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000823.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000823.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000823.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000822.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000822.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01000822.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000821.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000821.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000821.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000820.1 1 137
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000820.1	RefSeq	region	1	137	.	+	.	ID=NZ_CAAR01000820.1:1..137;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000819.1 1 118
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000819.1	RefSeq	region	1	118	.	+	.	ID=NZ_CAAR01000819.1:1..118;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000818.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000818.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000818.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000817.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000817.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000817.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000816.1 1 131
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000816.1	RefSeq	region	1	131	.	+	.	ID=NZ_CAAR01000816.1:1..131;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000815.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000815.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000815.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000814.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000814.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01000814.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000813.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000813.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01000813.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000812.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000812.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000812.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000811.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000811.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01000811.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000810.1 1 159
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000810.1	RefSeq	region	1	159	.	+	.	ID=NZ_CAAR01000810.1:1..159;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000809.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000809.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000809.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000808.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000808.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000808.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000807.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000807.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000807.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000806.1 1 116
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000806.1	RefSeq	region	1	116	.	+	.	ID=NZ_CAAR01000806.1:1..116;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000805.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000805.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01000805.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000804.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000804.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01000804.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000803.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000803.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01000803.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000802.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000802.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01000802.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000801.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000801.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01000801.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000800.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000800.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000800.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000799.1 1 119
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000799.1	RefSeq	region	1	119	.	+	.	ID=NZ_CAAR01000799.1:1..119;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000798.1 1 123
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000798.1	RefSeq	region	1	123	.	+	.	ID=NZ_CAAR01000798.1:1..123;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000797.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000797.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000797.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000796.1 1 117
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000796.1	RefSeq	region	1	117	.	+	.	ID=NZ_CAAR01000796.1:1..117;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000795.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000795.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01000795.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000794.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000794.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000794.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000793.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000793.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000793.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000792.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000792.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01000792.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000791.1 1 128
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000791.1	RefSeq	region	1	128	.	+	.	ID=NZ_CAAR01000791.1:1..128;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000790.1 1 116
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000790.1	RefSeq	region	1	116	.	+	.	ID=NZ_CAAR01000790.1:1..116;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000789.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000789.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01000789.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000788.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000788.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01000788.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000787.1 1 134
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000787.1	RefSeq	region	1	134	.	+	.	ID=NZ_CAAR01000787.1:1..134;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000786.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000786.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01000786.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000785.1 1 134
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000785.1	RefSeq	region	1	134	.	+	.	ID=NZ_CAAR01000785.1:1..134;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000784.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000784.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01000784.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000783.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000783.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000783.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000782.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000782.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01000782.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000781.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000781.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000781.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000780.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000780.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000780.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000779.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000779.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000779.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000778.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000778.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000778.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000777.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000777.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01000777.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000776.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000776.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000776.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000775.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000775.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01000775.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000774.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000774.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000774.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000773.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000773.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000773.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000772.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000772.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01000772.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000771.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000771.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01000771.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000770.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000770.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000770.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000769.1 1 129
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000769.1	RefSeq	region	1	129	.	+	.	ID=NZ_CAAR01000769.1:1..129;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000768.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000768.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01000768.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000767.1 1 161
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000767.1	RefSeq	region	1	161	.	+	.	ID=NZ_CAAR01000767.1:1..161;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000766.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000766.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01000766.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000765.1 1 131
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000765.1	RefSeq	region	1	131	.	+	.	ID=NZ_CAAR01000765.1:1..131;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000764.1 1 116
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000764.1	RefSeq	region	1	116	.	+	.	ID=NZ_CAAR01000764.1:1..116;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000763.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000763.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000763.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000762.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000762.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01000762.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000761.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000761.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000761.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000760.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000760.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000760.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000759.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000759.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000759.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000758.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000758.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01000758.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000757.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000757.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01000757.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000756.1 1 183
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000756.1	RefSeq	region	1	183	.	+	.	ID=NZ_CAAR01000756.1:1..183;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000755.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000755.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01000755.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000754.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000754.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000754.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000753.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000753.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000753.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000752.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000752.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01000752.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000751.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000751.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000751.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000750.1 1 172
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000750.1	RefSeq	region	1	172	.	+	.	ID=NZ_CAAR01000750.1:1..172;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000749.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000749.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01000749.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000748.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000748.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000748.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000747.1 1 116
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000747.1	RefSeq	region	1	116	.	+	.	ID=NZ_CAAR01000747.1:1..116;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000746.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000746.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000746.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000745.1 1 128
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000745.1	RefSeq	region	1	128	.	+	.	ID=NZ_CAAR01000745.1:1..128;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000744.1 1 162
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000744.1	RefSeq	region	1	162	.	+	.	ID=NZ_CAAR01000744.1:1..162;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000743.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000743.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01000743.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000742.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000742.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000742.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000741.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000741.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000741.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000740.1 1 179
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000740.1	RefSeq	region	1	179	.	+	.	ID=NZ_CAAR01000740.1:1..179;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000739.1 1 126
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000739.1	RefSeq	region	1	126	.	+	.	ID=NZ_CAAR01000739.1:1..126;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000738.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000738.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000738.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000737.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000737.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01000737.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000736.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000736.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000736.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000735.1 1 2731
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000735.1	RefSeq	region	1	2731	.	+	.	ID=NZ_CAAR01000735.1:1..2731;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000735.1	RefSeq	gene	1	352	.	+	.	ID=gene-STY7866_RS20350;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=STY7866_RS20350;partial=true;start_range=.,1
NZ_CAAR01000735.1	Protein Homology	CDS	1	352	.	+	1	ID=cds-WP_000331072.1;Parent=gene-STY7866_RS20350;Dbxref=Genbank:WP_000331072.1;Name=WP_000331072.1;gbkey=CDS;gene=tpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457971.1;locus_tag=STY7866_RS20350;partial=true;product=triose-phosphate isomerase;protein_id=WP_000331072.1;start_range=.,1;transl_table=11
NZ_CAAR01000735.1	RefSeq	gene	444	1208	.	-	.	ID=gene-STY7866_RS20355;Name=STY7866_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20355
NZ_CAAR01000735.1	Protein Homology	CDS	444	1208	.	-	0	ID=cds-WP_001088043.1;Parent=gene-STY7866_RS20355;Dbxref=Genbank:WP_001088043.1;Name=WP_001088043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457972.1;locus_tag=STY7866_RS20355;product=ribulose-phosphate 3-epimerase;protein_id=WP_001088043.1;transl_table=11
NZ_CAAR01000735.1	RefSeq	gene	1218	1508	.	-	.	ID=gene-STY7866_RS20360;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=STY7866_RS20360
NZ_CAAR01000735.1	Protein Homology	CDS	1218	1508	.	-	0	ID=cds-WP_001543603.1;Parent=gene-STY7866_RS20360;Dbxref=Genbank:WP_001543603.1;Name=WP_001543603.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=STY7866_RS20360;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_001543603.1;transl_table=11
NZ_CAAR01000735.1	RefSeq	gene	1591	2466	.	-	.	ID=gene-STY7866_RS20365;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=STY7866_RS20365
NZ_CAAR01000735.1	Protein Homology	CDS	1591	2466	.	-	0	ID=cds-WP_000774152.1;Parent=gene-STY7866_RS20365;Dbxref=Genbank:WP_000774152.1;Name=WP_000774152.1;gbkey=CDS;gene=lsrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457974.1;locus_tag=STY7866_RS20365;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_000774152.1;transl_table=11
NZ_CAAR01000735.1	RefSeq	pseudogene	2495	2731	.	-	.	ID=gene-STY7866_RS20370;Name=STY7866_RS20370;end_range=2731,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20370;partial=true;pseudo=true
NZ_CAAR01000735.1	Protein Homology	CDS	2495	2731	.	-	0	ID=cds-STY7866_RS20370;Parent=gene-STY7866_RS20370;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2731,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457975.1;locus_tag=STY7866_RS20370;partial=true;product=autoinducer 2 ABC transporter substrate-binding protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000734.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000734.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000734.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000733.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000733.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01000733.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000732.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000732.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01000732.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000731.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000731.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000731.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000730.1 1 105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000730.1	RefSeq	region	1	105	.	+	.	ID=NZ_CAAR01000730.1:1..105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000729.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000729.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000729.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000728.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000728.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01000728.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000727.1 1 142
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000727.1	RefSeq	region	1	142	.	+	.	ID=NZ_CAAR01000727.1:1..142;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000726.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000726.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01000726.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000725.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000725.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000725.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000724.1 1 140
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000724.1	RefSeq	region	1	140	.	+	.	ID=NZ_CAAR01000724.1:1..140;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000723.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000723.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01000723.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000722.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000722.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000722.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000721.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000721.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000721.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000720.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000720.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000720.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000719.1 1 6532
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000719.1	RefSeq	region	1	6532	.	+	.	ID=NZ_CAAR01000719.1:1..6532;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000719.1	RefSeq	gene	1	294	.	-	.	ID=gene-STY7866_RS20300;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=STY7866_RS20300;partial=true;start_range=.,1
NZ_CAAR01000719.1	Protein Homology	CDS	1	294	.	-	0	ID=cds-WP_000557255.1;Parent=gene-STY7866_RS20300;Dbxref=Genbank:WP_000557255.1;Name=WP_000557255.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455639.1;locus_tag=STY7866_RS20300;partial=true;product=curli assembly protein CsgC;protein_id=WP_000557255.1;start_range=.,1;transl_table=11
NZ_CAAR01000719.1	RefSeq	gene	356	811	.	-	.	ID=gene-STY7866_RS20305;Name=STY7866_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20305
NZ_CAAR01000719.1	Protein Homology	CDS	356	811	.	-	0	ID=cds-WP_000771416.1;Parent=gene-STY7866_RS20305;Dbxref=Genbank:WP_000771416.1;Name=WP_000771416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455638.1;locus_tag=STY7866_RS20305;product=curlin major subunit CsgA;protein_id=WP_000771416.1;transl_table=11
NZ_CAAR01000719.1	RefSeq	gene	853	1308	.	-	.	ID=gene-STY7866_RS20310;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=STY7866_RS20310
NZ_CAAR01000719.1	Protein Homology	CDS	853	1308	.	-	0	ID=cds-WP_000791653.1;Parent=gene-STY7866_RS20310;Dbxref=Genbank:WP_000791653.1;Name=WP_000791653.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455637.1;locus_tag=STY7866_RS20310;product=curlin minor subunit CsgB;protein_id=WP_000791653.1;transl_table=11
NZ_CAAR01000719.1	RefSeq	gene	2064	2690	.	+	.	ID=gene-STY7866_RS20315;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=STY7866_RS20315
NZ_CAAR01000719.1	Protein Homology	CDS	2064	2690	.	+	0	ID=cds-WP_000481516.1;Parent=gene-STY7866_RS20315;Dbxref=Genbank:WP_000481516.1;Name=WP_000481516.1;gbkey=CDS;gene=csgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455636.1;locus_tag=STY7866_RS20315;product=transcriptional regulator CsgD;protein_id=WP_000481516.1;transl_table=11
NZ_CAAR01000719.1	RefSeq	gene	2719	3114	.	+	.	ID=gene-STY7866_RS20320;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=STY7866_RS20320
NZ_CAAR01000719.1	Protein Homology	CDS	2719	3114	.	+	0	ID=cds-WP_000833307.1;Parent=gene-STY7866_RS20320;Dbxref=Genbank:WP_000833307.1;Name=WP_000833307.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455635.1;locus_tag=STY7866_RS20320;product=curli production assembly/transport protein CsgE;protein_id=WP_000833307.1;transl_table=11
NZ_CAAR01000719.1	RefSeq	gene	3141	3557	.	+	.	ID=gene-STY7866_RS20325;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=STY7866_RS20325
NZ_CAAR01000719.1	Protein Homology	CDS	3141	3557	.	+	0	ID=cds-WP_001264074.1;Parent=gene-STY7866_RS20325;Dbxref=Genbank:WP_001264074.1;Name=WP_001264074.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455634.1;locus_tag=STY7866_RS20325;product=curli production assembly/transport protein CsgF;protein_id=WP_001264074.1;transl_table=11
NZ_CAAR01000719.1	RefSeq	gene	3584	4417	.	+	.	ID=gene-STY7866_RS20330;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=STY7866_RS20330
NZ_CAAR01000719.1	Protein Homology	CDS	3584	4417	.	+	0	ID=cds-WP_001137620.1;Parent=gene-STY7866_RS20330;Dbxref=Genbank:WP_001137620.1;Name=WP_001137620.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455633.1;locus_tag=STY7866_RS20330;product=curli production assembly/transport protein CsgG;protein_id=WP_001137620.1;transl_table=11
NZ_CAAR01000719.1	RefSeq	pseudogene	4455	4938	.	-	.	ID=gene-STY7866_RS20335;Name=STY7866_RS20335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20335;pseudo=true
NZ_CAAR01000719.1	Protein Homology	CDS	4455	4938	.	-	0	ID=cds-STY7866_RS20335;Parent=gene-STY7866_RS20335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156175.1;locus_tag=STY7866_RS20335;product=DUF1097 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000719.1	RefSeq	gene	5039	5593	.	-	.	ID=gene-STY7866_RS20340;Name=STY7866_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20340
NZ_CAAR01000719.1	Protein Homology	CDS	5039	5593	.	-	0	ID=cds-WP_001001883.1;Parent=gene-STY7866_RS20340;Dbxref=Genbank:WP_001001883.1;Name=WP_001001883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455631.1;locus_tag=STY7866_RS20340;product=molecular chaperone;protein_id=WP_001001883.1;transl_table=11
NZ_CAAR01000719.1	RefSeq	gene	5617	6354	.	-	.	ID=gene-STY7866_RS20345;Name=STY7866_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20345
NZ_CAAR01000719.1	Protein Homology	CDS	5617	6354	.	-	0	ID=cds-WP_000283643.1;Parent=gene-STY7866_RS20345;Dbxref=Genbank:WP_000283643.1;Name=WP_000283643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455630.1;locus_tag=STY7866_RS20345;product=phosphatase;protein_id=WP_000283643.1;transl_table=11
NZ_CAAR01000719.1	RefSeq	pseudogene	6439	6532	.	-	.	ID=gene-STY7866_RS27985;Name=ghrA;end_range=6532,.;gbkey=Gene;gene=ghrA;gene_biotype=pseudogene;locus_tag=STY7866_RS27985;partial=true;pseudo=true
NZ_CAAR01000719.1	Protein Homology	CDS	6439	6532	.	-	1	ID=cds-STY7866_RS27985;Parent=gene-STY7866_RS27985;Note=catalyzes the formation of glycolate and glycerate from glyoxylate and hydroxypyruvate%2C respectively%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6532,.;gbkey=CDS;gene=ghrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455629.1;locus_tag=STY7866_RS27985;partial=true;product=glyoxylate/hydroxypyruvate reductase GhrA;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000718.1 1 123
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000718.1	RefSeq	region	1	123	.	+	.	ID=NZ_CAAR01000718.1:1..123;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000717.1 1 103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000717.1	RefSeq	region	1	103	.	+	.	ID=NZ_CAAR01000717.1:1..103;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000716.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000716.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01000716.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000715.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000715.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01000715.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000714.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000714.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000714.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000713.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000713.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000713.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000712.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000712.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01000712.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000711.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000711.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01000711.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000710.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000710.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000710.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000709.1 1 116
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000709.1	RefSeq	region	1	116	.	+	.	ID=NZ_CAAR01000709.1:1..116;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000708.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000708.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01000708.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000707.1 1 3722
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000707.1	RefSeq	region	1	3722	.	+	.	ID=NZ_CAAR01000707.1:1..3722;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000707.1	RefSeq	gene	137	985	.	-	.	ID=gene-STY7866_RS20270;Name=STY7866_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20270
NZ_CAAR01000707.1	Protein Homology	CDS	137	985	.	-	0	ID=cds-WP_000190268.1;Parent=gene-STY7866_RS20270;Dbxref=Genbank:WP_000190268.1;Name=WP_000190268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456245.1;locus_tag=STY7866_RS20270;product=MerR family transcriptional regulator;protein_id=WP_000190268.1;transl_table=11
NZ_CAAR01000707.1	RefSeq	gene	1054	1647	.	-	.	ID=gene-STY7866_RS20275;Name=STY7866_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20275
NZ_CAAR01000707.1	Protein Homology	CDS	1054	1647	.	-	0	ID=cds-WP_001787632.1;Parent=gene-STY7866_RS20275;Dbxref=Genbank:WP_001787632.1;Name=WP_001787632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456246.1;locus_tag=STY7866_RS20275;product=helix-turn-helix transcriptional regulator;protein_id=WP_001787632.1;transl_table=11
NZ_CAAR01000707.1	RefSeq	pseudogene	1792	2582	.	-	.	ID=gene-STY7866_RS20280;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=pseudogene;locus_tag=STY7866_RS20280;pseudo=true
NZ_CAAR01000707.1	Protein Homology	CDS	1792	2582	.	-	0	ID=cds-STY7866_RS20280;Parent=gene-STY7866_RS20280;Note=frameshifted;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456247.1;locus_tag=STY7866_RS20280;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);pseudo=true;transl_table=11
NZ_CAAR01000707.1	RefSeq	gene	2691	3341	.	-	.	ID=gene-STY7866_RS20285;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=STY7866_RS20285
NZ_CAAR01000707.1	Protein Homology	CDS	2691	3341	.	-	0	ID=cds-WP_000234684.1;Parent=gene-STY7866_RS20285;Dbxref=Genbank:WP_000234684.1;Name=WP_000234684.1;gbkey=CDS;gene=zinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456248.1;locus_tag=STY7866_RS20285;product=metal-binding protein ZinT;protein_id=WP_000234684.1;transl_table=11
NZ_CAAR01000707.1	RefSeq	gene	3450	3526	.	-	.	ID=gene-STY7866_RS20290;Name=STY7866_RS20290;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS20290
NZ_CAAR01000707.1	tRNAscan-SE	tRNA	3450	3526	.	-	.	ID=rna-STY7866_RS20290;Parent=gene-STY7866_RS20290;anticodon=(pos:complement(3490..3492));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS20290;product=tRNA-Arg
NZ_CAAR01000707.1	tRNAscan-SE	exon	3450	3526	.	-	.	ID=exon-STY7866_RS20290-1;Parent=rna-STY7866_RS20290;anticodon=(pos:complement(3490..3492));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS20290;product=tRNA-Arg
NZ_CAAR01000707.1	RefSeq	gene	3535	3722	.	-	.	ID=gene-STY7866_RS20295;Name=STY7866_RS20295;end_range=3722,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20295;partial=true
NZ_CAAR01000707.1	Protein Homology	CDS	3535	3722	.	-	2	ID=cds-WP_000519170.1;Parent=gene-STY7866_RS20295;Dbxref=Genbank:WP_000519170.1;Name=WP_000519170.1;end_range=3722,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456249.1;locus_tag=STY7866_RS20295;partial=true;product=four-helix bundle copper-binding protein;protein_id=WP_000519170.1;transl_table=11
##sequence-region NZ_CAAR01000706.1 1 119
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000706.1	RefSeq	region	1	119	.	+	.	ID=NZ_CAAR01000706.1:1..119;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000705.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000705.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000705.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000704.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000704.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000704.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000703.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000703.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000703.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000702.1 1 145
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000702.1	RefSeq	region	1	145	.	+	.	ID=NZ_CAAR01000702.1:1..145;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000701.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000701.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01000701.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000700.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000700.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000700.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000699.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000699.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01000699.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000698.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000698.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000698.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000697.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000697.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000697.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000696.1 1 122
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000696.1	RefSeq	region	1	122	.	+	.	ID=NZ_CAAR01000696.1:1..122;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000695.1 1 113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000695.1	RefSeq	region	1	113	.	+	.	ID=NZ_CAAR01000695.1:1..113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000694.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000694.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01000694.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000693.1 1 101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000693.1	RefSeq	region	1	101	.	+	.	ID=NZ_CAAR01000693.1:1..101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000692.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000692.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000692.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000691.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000691.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01000691.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000690.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000690.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01000690.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000689.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000689.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000689.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000688.1 1 108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000688.1	RefSeq	region	1	108	.	+	.	ID=NZ_CAAR01000688.1:1..108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000687.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000687.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01000687.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000686.1 1 117
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000686.1	RefSeq	region	1	117	.	+	.	ID=NZ_CAAR01000686.1:1..117;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000685.1 1 119
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000685.1	RefSeq	region	1	119	.	+	.	ID=NZ_CAAR01000685.1:1..119;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000684.1 1 114
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000684.1	RefSeq	region	1	114	.	+	.	ID=NZ_CAAR01000684.1:1..114;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000683.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000683.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000683.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000682.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000682.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000682.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000681.1 1 117
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000681.1	RefSeq	region	1	117	.	+	.	ID=NZ_CAAR01000681.1:1..117;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000680.1 1 109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000680.1	RefSeq	region	1	109	.	+	.	ID=NZ_CAAR01000680.1:1..109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000679.1 1 167
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000679.1	RefSeq	region	1	167	.	+	.	ID=NZ_CAAR01000679.1:1..167;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000678.1 1 3596
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000678.1	RefSeq	region	1	3596	.	+	.	ID=NZ_CAAR01000678.1:1..3596;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000678.1	RefSeq	gene	23	208	.	+	.	ID=gene-STY7866_RS20235;Name=STY7866_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20235
NZ_CAAR01000678.1	Protein Homology	CDS	23	208	.	+	0	ID=cds-WP_001787553.1;Parent=gene-STY7866_RS20235;Dbxref=Genbank:WP_001787553.1;Name=WP_001787553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607915.1;locus_tag=STY7866_RS20235;product=hypothetical protein;protein_id=WP_001787553.1;transl_table=11
NZ_CAAR01000678.1	RefSeq	gene	254	790	.	+	.	ID=gene-STY7866_RS20240;Name=STY7866_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20240
NZ_CAAR01000678.1	Protein Homology	CDS	254	790	.	+	0	ID=cds-WP_001038500.1;Parent=gene-STY7866_RS20240;Dbxref=Genbank:WP_001038500.1;Name=WP_001038500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457426.1;locus_tag=STY7866_RS20240;product=porin family protein;protein_id=WP_001038500.1;transl_table=11
NZ_CAAR01000678.1	RefSeq	gene	837	1469	.	+	.	ID=gene-STY7866_RS20245;Name=STY7866_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20245
NZ_CAAR01000678.1	Protein Homology	CDS	837	1469	.	+	0	ID=cds-WP_000835268.1;Parent=gene-STY7866_RS20245;Dbxref=Genbank:WP_000835268.1;Name=WP_000835268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=STY7866_RS20245;product=YfdX family protein;protein_id=WP_000835268.1;transl_table=11
NZ_CAAR01000678.1	RefSeq	gene	2188	2769	.	+	.	ID=gene-STY7866_RS20250;Name=STY7866_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20250
NZ_CAAR01000678.1	Protein Homology	CDS	2188	2769	.	+	0	ID=cds-WP_001244646.1;Parent=gene-STY7866_RS20250;Dbxref=Genbank:WP_001244646.1;Name=WP_001244646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457424.1;locus_tag=STY7866_RS20250;product=fimbrial protein;protein_id=WP_001244646.1;transl_table=11
NZ_CAAR01000678.1	RefSeq	gene	2889	3596	.	+	.	ID=gene-STY7866_RS20255;Name=STY7866_RS20255;end_range=3596,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20255;partial=true
NZ_CAAR01000678.1	Protein Homology	CDS	2889	3596	.	+	0	ID=cds-WP_000705509.1;Parent=gene-STY7866_RS20255;Dbxref=Genbank:WP_000705509.1;Name=WP_000705509.1;end_range=3596,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457423.1;locus_tag=STY7866_RS20255;partial=true;product=fimbria/pilus outer membrane usher protein;protein_id=WP_000705509.1;transl_table=11
##sequence-region NZ_CAAR01000677.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000677.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000677.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000676.1 1 114
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000676.1	RefSeq	region	1	114	.	+	.	ID=NZ_CAAR01000676.1:1..114;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000675.1 1 145
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000675.1	RefSeq	region	1	145	.	+	.	ID=NZ_CAAR01000675.1:1..145;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000674.1 1 118
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000674.1	RefSeq	region	1	118	.	+	.	ID=NZ_CAAR01000674.1:1..118;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000673.1 1 114
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000673.1	RefSeq	region	1	114	.	+	.	ID=NZ_CAAR01000673.1:1..114;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000672.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000672.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01000672.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000671.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000671.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000671.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000670.1 1 116
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000670.1	RefSeq	region	1	116	.	+	.	ID=NZ_CAAR01000670.1:1..116;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000669.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000669.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000669.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000668.1 1 116
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000668.1	RefSeq	region	1	116	.	+	.	ID=NZ_CAAR01000668.1:1..116;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000667.1 1 110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000667.1	RefSeq	region	1	110	.	+	.	ID=NZ_CAAR01000667.1:1..110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000666.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000666.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000666.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000665.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000665.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000665.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000664.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000664.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01000664.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000663.1 1 114
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000663.1	RefSeq	region	1	114	.	+	.	ID=NZ_CAAR01000663.1:1..114;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000662.1 1 171
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000662.1	RefSeq	region	1	171	.	+	.	ID=NZ_CAAR01000662.1:1..171;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000661.1 1 122
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000661.1	RefSeq	region	1	122	.	+	.	ID=NZ_CAAR01000661.1:1..122;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000660.1 1 112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000660.1	RefSeq	region	1	112	.	+	.	ID=NZ_CAAR01000660.1:1..112;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000659.1 1 106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000659.1	RefSeq	region	1	106	.	+	.	ID=NZ_CAAR01000659.1:1..106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000658.1 1 107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000658.1	RefSeq	region	1	107	.	+	.	ID=NZ_CAAR01000658.1:1..107;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000657.1 1 102
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000657.1	RefSeq	region	1	102	.	+	.	ID=NZ_CAAR01000657.1:1..102;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000656.1 1 139
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000656.1	RefSeq	region	1	139	.	+	.	ID=NZ_CAAR01000656.1:1..139;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000655.1 1 100
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000655.1	RefSeq	region	1	100	.	+	.	ID=NZ_CAAR01000655.1:1..100;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000654.1 1 581
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000654.1	RefSeq	region	1	581	.	+	.	ID=NZ_CAAR01000654.1:1..581;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000654.1	RefSeq	gene	1	452	.	-	.	ID=gene-STY7866_RS20225;Name=STY7866_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20225;partial=true;start_range=.,1
NZ_CAAR01000654.1	Protein Homology	CDS	1	452	.	-	0	ID=cds-WP_001765238.1;Parent=gene-STY7866_RS20225;Dbxref=Genbank:WP_001765238.1;Name=WP_001765238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454909.1;locus_tag=STY7866_RS20225;partial=true;product=polysaccharide deacetylase family protein;protein_id=WP_001765238.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000653.1 1 592
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000653.1	RefSeq	region	1	592	.	+	.	ID=NZ_CAAR01000653.1:1..592;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000653.1	RefSeq	pseudogene	1	592	.	+	.	ID=gene-STY7866_RS20220;Name=STY7866_RS20220;end_range=592,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20220;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000653.1	Protein Homology	CDS	1	592	.	+	1	ID=cds-STY7866_RS20220;Parent=gene-STY7866_RS20220;Note=high-affinity transporter for xanthine%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=592,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458181.1;locus_tag=STY7866_RS20220;partial=true;product=xanthine permease XanP;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000652.1 1 254
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000652.1	RefSeq	region	1	254	.	+	.	ID=NZ_CAAR01000652.1:1..254;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000652.1	RefSeq	pseudogene	1	254	.	-	.	ID=gene-STY7866_RS26520;Name=STY7866_RS26520;end_range=254,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26520;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000652.1	Protein Homology	CDS	1	254	.	-	1	ID=cds-STY7866_RS26520;Parent=gene-STY7866_RS26520;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=254,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312732.1;locus_tag=STY7866_RS26520;partial=true;product=dihydroxy-acid dehydratase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000651.1 1 143
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000651.1	RefSeq	region	1	143	.	+	.	ID=NZ_CAAR01000651.1:1..143;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000650.1 1 608
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000650.1	RefSeq	region	1	608	.	+	.	ID=NZ_CAAR01000650.1:1..608;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000650.1	RefSeq	pseudogene	1	608	.	+	.	ID=gene-STY7866_RS20210;Name=STY7866_RS20210;end_range=608,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20210;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000650.1	Protein Homology	CDS	1	608	.	+	2	ID=cds-STY7866_RS20210;Parent=gene-STY7866_RS20210;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=608,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458676.1;locus_tag=STY7866_RS20210;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000649.1 1 581
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000649.1	RefSeq	region	1	581	.	+	.	ID=NZ_CAAR01000649.1:1..581;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000649.1	RefSeq	gene	1	429	.	-	.	ID=gene-STY7866_RS20205;Name=STY7866_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20205;partial=true;start_range=.,1
NZ_CAAR01000649.1	Protein Homology	CDS	1	429	.	-	0	ID=cds-WP_001243236.1;Parent=gene-STY7866_RS20205;Dbxref=Genbank:WP_001243236.1;Name=WP_001243236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454636.1;locus_tag=STY7866_RS20205;partial=true;product=fimbrial protein BcfF;protein_id=WP_001243236.1;start_range=.,1;transl_table=11
NZ_CAAR01000649.1	RefSeq	pseudogene	445	581	.	-	.	ID=gene-STY7866_RS27810;Name=STY7866_RS27810;end_range=581,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27810;partial=true;pseudo=true
NZ_CAAR01000649.1	Protein Homology	CDS	445	581	.	-	1	ID=cds-STY7866_RS27810;Parent=gene-STY7866_RS27810;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=581,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454635.1;locus_tag=STY7866_RS27810;partial=true;product=fimbrial protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000648.1 1 229
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000648.1	RefSeq	region	1	229	.	+	.	ID=NZ_CAAR01000648.1:1..229;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000647.1 1 302
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000647.1	RefSeq	region	1	302	.	+	.	ID=NZ_CAAR01000647.1:1..302;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000647.1	RefSeq	gene	1	302	.	-	.	ID=gene-STY7866_RS26515;Name=STY7866_RS26515;end_range=302,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26515;partial=true;start_range=.,1
NZ_CAAR01000647.1	Protein Homology	CDS	1	302	.	-	1	ID=cds-WP_000518701.1;Parent=gene-STY7866_RS26515;Dbxref=Genbank:WP_000518701.1;Name=WP_000518701.1;end_range=302,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455618.1;locus_tag=STY7866_RS26515;partial=true;product=hypothetical protein;protein_id=WP_000518701.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000646.1 1 314
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000646.1	RefSeq	region	1	314	.	+	.	ID=NZ_CAAR01000646.1:1..314;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000646.1	RefSeq	pseudogene	1	314	.	+	.	ID=gene-STY7866_RS20190;Name=STY7866_RS20190;end_range=314,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20190;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000646.1	Protein Homology	CDS	1	314	.	+	2	ID=cds-STY7866_RS20190;Parent=gene-STY7866_RS20190;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=314,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458667.1;locus_tag=STY7866_RS20190;partial=true;product=phosphoadenosine phosphosulfate reductase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000645.1 1 326
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000645.1	RefSeq	region	1	326	.	+	.	ID=NZ_CAAR01000645.1:1..326;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000645.1	RefSeq	gene	1	326	.	-	.	ID=gene-STY7866_RS20185;Name=STY7866_RS20185;end_range=326,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20185;partial=true;start_range=.,1
NZ_CAAR01000645.1	Protein Homology	CDS	1	326	.	-	1	ID=cds-WP_000696513.1;Parent=gene-STY7866_RS20185;Dbxref=Genbank:WP_000696513.1;Name=WP_000696513.1;end_range=326,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=STY7866_RS20185;partial=true;product=L%2CD-transpeptidase family protein;protein_id=WP_000696513.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000644.1 1 1806
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000644.1	RefSeq	region	1	1806	.	+	.	ID=NZ_CAAR01000644.1:1..1806;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000644.1	RefSeq	gene	289	759	.	-	.	ID=gene-STY7866_RS20175;Name=STY7866_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20175
NZ_CAAR01000644.1	Protein Homology	CDS	289	759	.	-	0	ID=cds-WP_000266939.1;Parent=gene-STY7866_RS20175;Dbxref=Genbank:WP_000266939.1;Name=WP_000266939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454908.1;locus_tag=STY7866_RS20175;product=pilin structural protein SafD;protein_id=WP_000266939.1;transl_table=11
NZ_CAAR01000644.1	RefSeq	pseudogene	781	1806	.	-	.	ID=gene-STY7866_RS20180;Name=STY7866_RS20180;end_range=1806,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20180;partial=true;pseudo=true
NZ_CAAR01000644.1	Protein Homology	CDS	781	1806	.	-	1	ID=cds-STY7866_RS20180;Parent=gene-STY7866_RS20180;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=1806,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454907.1;locus_tag=STY7866_RS20180;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000643.1 1 470
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000643.1	RefSeq	region	1	470	.	+	.	ID=NZ_CAAR01000643.1:1..470;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000643.1	RefSeq	pseudogene	1	470	.	-	.	ID=gene-STY7866_RS20170;Name=lnt;end_range=470,.;gbkey=Gene;gene=lnt;gene_biotype=pseudogene;locus_tag=STY7866_RS20170;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000643.1	Protein Homology	CDS	1	470	.	-	2	ID=cds-STY7866_RS20170;Parent=gene-STY7866_RS20170;Note=Transfers the fatty acyl group on membrane lipoproteins%3B frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=470,.;gbkey=CDS;gene=lnt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455235.1;locus_tag=STY7866_RS20170;partial=true;product=apolipoprotein N-acyltransferase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000642.1 1 600
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000642.1	RefSeq	region	1	600	.	+	.	ID=NZ_CAAR01000642.1:1..600;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000642.1	RefSeq	pseudogene	1	501	.	-	.	ID=gene-STY7866_RS20165;Name=tas;gbkey=Gene;gene=tas;gene_biotype=pseudogene;locus_tag=STY7866_RS20165;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000642.1	Protein Homology	CDS	1	501	.	-	0	ID=cds-STY7866_RS20165;Parent=gene-STY7866_RS20165;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=tas;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527995.1;locus_tag=STY7866_RS20165;partial=true;product=NADP(H)-dependent aldo-keto reductase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000641.1 1 553
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000641.1	RefSeq	region	1	553	.	+	.	ID=NZ_CAAR01000641.1:1..553;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000641.1	RefSeq	gene	1	553	.	+	.	ID=gene-STY7866_RS20160;Name=STY7866_RS20160;end_range=553,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20160;partial=true;start_range=.,1
NZ_CAAR01000641.1	Protein Homology	CDS	1	553	.	+	0	ID=cds-WP_000322919.1;Parent=gene-STY7866_RS20160;Dbxref=Genbank:WP_000322919.1;Name=WP_000322919.1;end_range=553,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=STY7866_RS20160;partial=true;product=Hsp70 family protein;protein_id=WP_000322919.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000640.1 1 163
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000640.1	RefSeq	region	1	163	.	+	.	ID=NZ_CAAR01000640.1:1..163;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000639.1 1 584
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000639.1	RefSeq	region	1	584	.	+	.	ID=NZ_CAAR01000639.1:1..584;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000639.1	RefSeq	gene	1	584	.	-	.	ID=gene-STY7866_RS20155;Name=STY7866_RS20155;end_range=584,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20155;partial=true;start_range=.,1
NZ_CAAR01000639.1	Protein Homology	CDS	1	584	.	-	2	ID=cds-WP_000000912.1;Parent=gene-STY7866_RS20155;Dbxref=Genbank:WP_000000912.1;Name=WP_000000912.1;end_range=584,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457439.1;locus_tag=STY7866_RS20155;partial=true;product=peptide chain release factor 2;protein_id=WP_000000912.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000638.1 1 520
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000638.1	RefSeq	region	1	520	.	+	.	ID=NZ_CAAR01000638.1:1..520;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000638.1	RefSeq	gene	1	520	.	+	.	ID=gene-STY7866_RS20150;Name=STY7866_RS20150;end_range=520,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20150;partial=true;start_range=.,1
NZ_CAAR01000638.1	Protein Homology	CDS	1	520	.	+	2	ID=cds-WP_000363792.1;Parent=gene-STY7866_RS20150;Dbxref=Genbank:WP_000363792.1;Name=WP_000363792.1;end_range=520,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454898.1;locus_tag=STY7866_RS20150;partial=true;product=hypothetical protein;protein_id=WP_000363792.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000637.1 1 1725
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000637.1	RefSeq	region	1	1725	.	+	.	ID=NZ_CAAR01000637.1:1..1725;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000637.1	RefSeq	gene	1	301	.	-	.	ID=gene-STY7866_RS20140;Name=STY7866_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20140;partial=true;start_range=.,1
NZ_CAAR01000637.1	Protein Homology	CDS	1	301	.	-	0	ID=cds-WP_000113037.1;Parent=gene-STY7866_RS20140;Dbxref=Genbank:WP_000113037.1;Name=WP_000113037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455054.1;locus_tag=STY7866_RS20140;partial=true;product=HAD-IIB family hydrolase;protein_id=WP_000113037.1;start_range=.,1;transl_table=11
NZ_CAAR01000637.1	RefSeq	gene	401	1725	.	+	.	ID=gene-STY7866_RS20145;Name=STY7866_RS20145;end_range=1725,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20145;partial=true
NZ_CAAR01000637.1	Protein Homology	CDS	401	1725	.	+	0	ID=cds-WP_001238173.1;Parent=gene-STY7866_RS20145;Dbxref=Genbank:WP_001238173.1;Name=WP_001238173.1;end_range=1725,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455053.1;locus_tag=STY7866_RS20145;partial=true;product=hypothetical protein;protein_id=WP_001238173.1;transl_table=11
##sequence-region NZ_CAAR01000636.1 1 573
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000636.1	RefSeq	region	1	573	.	+	.	ID=NZ_CAAR01000636.1:1..573;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000636.1	RefSeq	gene	1	233	.	-	.	ID=gene-STY7866_RS20135;Name=STY7866_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20135;partial=true;start_range=.,1
NZ_CAAR01000636.1	Protein Homology	CDS	1	233	.	-	0	ID=cds-WP_000272191.1;Parent=gene-STY7866_RS20135;Dbxref=Genbank:WP_000272191.1;Name=WP_000272191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098742.1;locus_tag=STY7866_RS20135;partial=true;product=DUF3461 family protein;protein_id=WP_000272191.1;start_range=.,1;transl_table=11
NZ_CAAR01000636.1	RefSeq	gene	480	573	.	+	.	ID=gene-STY7866_RS27805;Name=STY7866_RS27805;end_range=573,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27805;partial=true
NZ_CAAR01000636.1	Protein Homology	CDS	480	573	.	+	0	ID=cds-WP_151260015.1;Parent=gene-STY7866_RS27805;Dbxref=Genbank:WP_151260015.1;Name=WP_151260015.1;end_range=573,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=STY7866_RS27805;partial=true;product=MHS family MFS transporter;protein_id=WP_151260015.1;transl_table=11
##sequence-region NZ_CAAR01000635.1 1 585
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000635.1	RefSeq	region	1	585	.	+	.	ID=NZ_CAAR01000635.1:1..585;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000635.1	RefSeq	pseudogene	1	341	.	+	.	ID=gene-STY7866_RS20125;Name=STY7866_RS20125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20125;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000635.1	Protein Homology	CDS	1	341	.	+	2	ID=cds-STY7866_RS20125;Parent=gene-STY7866_RS20125;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456445.1;locus_tag=STY7866_RS20125;partial=true;product=carbon-nitrogen hydrolase family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000635.1	RefSeq	pseudogene	365	585	.	+	.	ID=gene-STY7866_RS20130;Name=STY7866_RS20130;end_range=585,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20130;partial=true;pseudo=true
NZ_CAAR01000635.1	Protein Homology	CDS	365	585	.	+	0	ID=cds-STY7866_RS20130;Parent=gene-STY7866_RS20130;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=585,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456446.1;locus_tag=STY7866_RS20130;partial=true;product=DNA polymerase III subunit epsilon;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000634.1 1 497
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000634.1	RefSeq	region	1	497	.	+	.	ID=NZ_CAAR01000634.1:1..497;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000634.1	RefSeq	pseudogene	1	497	.	+	.	ID=gene-STY7866_RS20120;Name=STY7866_RS20120;end_range=497,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20120;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000634.1	Protein Homology	CDS	1	497	.	+	0	ID=cds-STY7866_RS20120;Parent=gene-STY7866_RS20120;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=497,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458633.1;locus_tag=STY7866_RS20120;partial=true;product=pilus assembly protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000633.1 1 386
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000633.1	RefSeq	region	1	386	.	+	.	ID=NZ_CAAR01000633.1:1..386;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000633.1	RefSeq	pseudogene	1	129	.	+	.	ID=gene-STY7866_RS20110;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=pseudogene;locus_tag=STY7866_RS20110;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000633.1	Protein Homology	CDS	1	129	.	+	0	ID=cds-STY7866_RS20110;Parent=gene-STY7866_RS20110;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456596.1;locus_tag=STY7866_RS20110;partial=true;product=propanediol utilization microcompartment protein PduK;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000633.1	RefSeq	pseudogene	129	386	.	+	.	ID=gene-STY7866_RS20115;Name=STY7866_RS20115;end_range=386,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20115;partial=true;pseudo=true
NZ_CAAR01000633.1	Protein Homology	CDS	129	386	.	+	0	ID=cds-STY7866_RS20115;Parent=gene-STY7866_RS20115;Note=catalyzes the formation of propionyl phosphate from propionyl-CoA in propanediol degradation%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=386,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456597.1;locus_tag=STY7866_RS20115;partial=true;product=propanediol utilization protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000632.1 1 1779
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000632.1	RefSeq	region	1	1779	.	+	.	ID=NZ_CAAR01000632.1:1..1779;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000632.1	RefSeq	gene	1	161	.	+	.	ID=gene-STY7866_RS27800;Name=STY7866_RS27800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27800;partial=true;start_range=.,1
NZ_CAAR01000632.1	Protein Homology	CDS	1	161	.	+	2	ID=cds-WP_000317112.1;Parent=gene-STY7866_RS27800;Dbxref=Genbank:WP_000317112.1;Name=WP_000317112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455842.1;locus_tag=STY7866_RS27800;partial=true;product=DUF2534 family protein;protein_id=WP_000317112.1;start_range=.,1;transl_table=11
NZ_CAAR01000632.1	RefSeq	gene	216	1163	.	-	.	ID=gene-STY7866_RS20100;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=STY7866_RS20100
NZ_CAAR01000632.1	Protein Homology	CDS	216	1163	.	-	0	ID=cds-WP_001262143.1;Parent=gene-STY7866_RS20100;Dbxref=Genbank:WP_001262143.1;Name=WP_001262143.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455843.1;locus_tag=STY7866_RS20100;product=universal stress protein UspE;protein_id=WP_001262143.1;transl_table=11
NZ_CAAR01000632.1	RefSeq	gene	1314	1779	.	-	.	ID=gene-STY7866_RS20105;Name=fnr;end_range=1779,.;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=STY7866_RS20105;partial=true
NZ_CAAR01000632.1	Protein Homology	CDS	1314	1779	.	-	1	ID=cds-WP_000112165.1;Parent=gene-STY7866_RS20105;Dbxref=Genbank:WP_000112165.1;Name=WP_000112165.1;end_range=1779,.;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=STY7866_RS20105;partial=true;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000112165.1;transl_table=11
##sequence-region NZ_CAAR01000631.1 1 403
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000631.1	RefSeq	region	1	403	.	+	.	ID=NZ_CAAR01000631.1:1..403;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000631.1	RefSeq	pseudogene	1	403	.	-	.	ID=gene-STY7866_RS26510;Name=STY7866_RS26510;end_range=403,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26510;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000631.1	Protein Homology	CDS	1	403	.	-	0	ID=cds-STY7866_RS26510;Parent=gene-STY7866_RS26510;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=403,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456817.1;locus_tag=STY7866_RS26510;partial=true;product=DNA gyrase subunit A;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000630.1 1 10455
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000630.1	RefSeq	region	1	10455	.	+	.	ID=NZ_CAAR01000630.1:1..10455;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000630.1	RefSeq	pseudogene	18	696	.	+	.	ID=gene-STY7866_RS20030;Name=STY7866_RS20030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20030;pseudo=true
NZ_CAAR01000630.1	Protein Homology	CDS	18	696	.	+	0	ID=cds-STY7866_RS20030;Parent=gene-STY7866_RS20030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000124455.1;locus_tag=STY7866_RS20030;product=cytoplasmic protein;pseudo=true;transl_table=11
NZ_CAAR01000630.1	RefSeq	gene	1016	1092	.	-	.	ID=gene-STY7866_RS20035;Name=STY7866_RS20035;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS20035
NZ_CAAR01000630.1	tRNAscan-SE	tRNA	1016	1092	.	-	.	ID=rna-STY7866_RS20035;Parent=gene-STY7866_RS20035;anticodon=(pos:complement(1056..1058));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS20035;product=tRNA-Asp
NZ_CAAR01000630.1	tRNAscan-SE	exon	1016	1092	.	-	.	ID=exon-STY7866_RS20035-1;Parent=rna-STY7866_RS20035;anticodon=(pos:complement(1056..1058));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS20035;product=tRNA-Asp
NZ_CAAR01000630.1	RefSeq	pseudogene	1226	1958	.	-	.	ID=gene-STY7866_RS20040;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=pseudogene;locus_tag=STY7866_RS20040;pseudo=true
NZ_CAAR01000630.1	Protein Homology	CDS	1226	1958	.	-	0	ID=cds-STY7866_RS20040;Parent=gene-STY7866_RS20040;Note=frameshifted;gbkey=CDS;gene=dnaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454867.1;locus_tag=STY7866_RS20040;product=DNA polymerase III subunit epsilon;pseudo=true;transl_table=11
NZ_CAAR01000630.1	RefSeq	gene	2022	2489	.	+	.	ID=gene-STY7866_RS20045;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=STY7866_RS20045
NZ_CAAR01000630.1	Protein Homology	CDS	2022	2489	.	+	0	ID=cds-WP_000917872.1;Parent=gene-STY7866_RS20045;Dbxref=Genbank:WP_000917872.1;Name=WP_000917872.1;gbkey=CDS;gene=rnhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454866.1;locus_tag=STY7866_RS20045;product=ribonuclease HI;protein_id=WP_000917872.1;transl_table=11
NZ_CAAR01000630.1	RefSeq	gene	2486	3208	.	-	.	ID=gene-STY7866_RS20050;Name=STY7866_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20050
NZ_CAAR01000630.1	Protein Homology	CDS	2486	3208	.	-	0	ID=cds-WP_000801233.1;Parent=gene-STY7866_RS20050;Dbxref=Genbank:WP_000801233.1;Name=WP_000801233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454865.1;locus_tag=STY7866_RS20050;product=class I SAM-dependent methyltransferase;protein_id=WP_000801233.1;transl_table=11
NZ_CAAR01000630.1	RefSeq	gene	3243	3998	.	+	.	ID=gene-STY7866_RS20055;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=STY7866_RS20055
NZ_CAAR01000630.1	Protein Homology	CDS	3243	3998	.	+	0	ID=cds-WP_001052766.1;Parent=gene-STY7866_RS20055;Dbxref=Genbank:WP_001052766.1;Name=WP_001052766.1;gbkey=CDS;gene=gloB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454864.1;locus_tag=STY7866_RS20055;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052766.1;transl_table=11
NZ_CAAR01000630.1	RefSeq	gene	4070	5437	.	+	.	ID=gene-STY7866_RS20060;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=STY7866_RS20060
NZ_CAAR01000630.1	Protein Homology	CDS	4070	5437	.	+	0	ID=cds-WP_000644706.1;Parent=gene-STY7866_RS20060;Dbxref=Genbank:WP_000644706.1;Name=WP_000644706.1;gbkey=CDS;gene=mltD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454863.1;locus_tag=STY7866_RS20060;product=murein transglycosylase D;protein_id=WP_000644706.1;transl_table=11
NZ_CAAR01000630.1	RefSeq	gene	5493	6263	.	-	.	ID=gene-STY7866_RS20065;Name=STY7866_RS20065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20065
NZ_CAAR01000630.1	Protein Homology	CDS	5493	6263	.	-	0	ID=cds-WP_000207227.1;Parent=gene-STY7866_RS20065;Dbxref=Genbank:WP_000207227.1;Name=WP_000207227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454862.1;locus_tag=STY7866_RS20065;product=class I SAM-dependent methyltransferase;protein_id=WP_000207227.1;transl_table=11
NZ_CAAR01000630.1	RefSeq	gene	6341	7141	.	-	.	ID=gene-STY7866_RS20070;Name=STY7866_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20070
NZ_CAAR01000630.1	Protein Homology	CDS	6341	7141	.	-	0	ID=cds-WP_001230964.1;Parent=gene-STY7866_RS20070;Dbxref=Genbank:WP_001230964.1;Name=WP_001230964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=STY7866_RS20070;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230964.1;transl_table=11
NZ_CAAR01000630.1	RefSeq	gene	7273	8448	.	-	.	ID=gene-STY7866_RS20075;Name=STY7866_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20075
NZ_CAAR01000630.1	Protein Homology	CDS	7273	8448	.	-	0	ID=cds-WP_001127546.1;Parent=gene-STY7866_RS20075;Dbxref=Genbank:WP_001127546.1;Name=WP_001127546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454860.1;locus_tag=STY7866_RS20075;product=MFS transporter;protein_id=WP_001127546.1;transl_table=11
NZ_CAAR01000630.1	RefSeq	gene	8553	9467	.	+	.	ID=gene-STY7866_RS20080;Name=STY7866_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20080
NZ_CAAR01000630.1	Protein Homology	CDS	8553	9467	.	+	0	ID=cds-WP_000648539.1;Parent=gene-STY7866_RS20080;Dbxref=Genbank:WP_000648539.1;Name=WP_000648539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454859.1;locus_tag=STY7866_RS20080;product=LysR family transcriptional regulator;protein_id=WP_000648539.1;transl_table=11
NZ_CAAR01000630.1	RefSeq	gene	9488	10291	.	-	.	ID=gene-STY7866_RS20085;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=STY7866_RS20085
NZ_CAAR01000630.1	Protein Homology	CDS	9488	10291	.	-	0	ID=cds-WP_000154870.1;Parent=gene-STY7866_RS20085;Dbxref=Genbank:WP_000154870.1;Name=WP_000154870.1;gbkey=CDS;gene=dkgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454858.1;locus_tag=STY7866_RS20085;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_000154870.1;transl_table=11
##sequence-region NZ_CAAR01000629.1 1 1079
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000629.1	RefSeq	region	1	1079	.	+	.	ID=NZ_CAAR01000629.1:1..1079;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000629.1	RefSeq	gene	48	254	.	-	.	ID=gene-STY7866_RS27795;Name=STY7866_RS27795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27795
NZ_CAAR01000629.1	Protein Homology	CDS	48	254	.	-	0	ID=cds-WP_071785967.1;Parent=gene-STY7866_RS27795;Dbxref=Genbank:WP_071785967.1;Name=WP_071785967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528216.1;locus_tag=STY7866_RS27795;product=hypothetical protein;protein_id=WP_071785967.1;transl_table=11
NZ_CAAR01000629.1	RefSeq	gene	318	1079	.	+	.	ID=gene-STY7866_RS20025;Name=ugpB;end_range=1079,.;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=STY7866_RS20025;partial=true
NZ_CAAR01000629.1	Protein Homology	CDS	318	1079	.	+	0	ID=cds-WP_000624745.1;Parent=gene-STY7866_RS20025;Dbxref=Genbank:WP_000624745.1;Name=WP_000624745.1;end_range=1079,.;gbkey=CDS;gene=ugpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458362.1;locus_tag=STY7866_RS20025;partial=true;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000624745.1;transl_table=11
##sequence-region NZ_CAAR01000628.1 1 5253
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000628.1	RefSeq	region	1	5253	.	+	.	ID=NZ_CAAR01000628.1:1..5253;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000628.1	RefSeq	pseudogene	1	1129	.	-	.	ID=gene-STY7866_RS20000;Name=STY7866_RS20000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS20000;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000628.1	Protein Homology	CDS	1	1129	.	-	0	ID=cds-STY7866_RS20000;Parent=gene-STY7866_RS20000;Note=internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=STY7866_RS20000;partial=true;product=winged helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000628.1	RefSeq	gene	1173	2150	.	-	.	ID=gene-STY7866_RS20005;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=STY7866_RS20005
NZ_CAAR01000628.1	Protein Homology	CDS	1173	2150	.	-	0	ID=cds-WP_000561698.1;Parent=gene-STY7866_RS20005;Dbxref=Genbank:WP_000561698.1;Name=WP_000561698.1;gbkey=CDS;gene=lpxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455472.1;locus_tag=STY7866_RS20005;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000561698.1;transl_table=11
NZ_CAAR01000628.1	RefSeq	gene	2147	3895	.	-	.	ID=gene-STY7866_RS20010;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=STY7866_RS20010
NZ_CAAR01000628.1	Protein Homology	CDS	2147	3895	.	-	0	ID=cds-WP_000551246.1;Parent=gene-STY7866_RS20010;Dbxref=Genbank:WP_000551246.1;Name=WP_000551246.1;gbkey=CDS;gene=msbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455471.1;locus_tag=STY7866_RS20010;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551246.1;transl_table=11
NZ_CAAR01000628.1	RefSeq	gene	3932	5253	.	-	.	ID=gene-STY7866_RS20015;Name=STY7866_RS20015;end_range=5253,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS20015;partial=true
NZ_CAAR01000628.1	Protein Homology	CDS	3932	5253	.	-	2	ID=cds-WP_000385207.1;Parent=gene-STY7866_RS20015;Dbxref=Genbank:WP_000385207.1;Name=WP_000385207.1;end_range=5253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455470.1;locus_tag=STY7866_RS20015;partial=true;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_000385207.1;transl_table=11
##sequence-region NZ_CAAR01000627.1 1 7007
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000627.1	RefSeq	region	1	7007	.	+	.	ID=NZ_CAAR01000627.1:1..7007;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000627.1	RefSeq	gene	1	509	.	-	.	ID=gene-STY7866_RS19970;Name=STY7866_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19970;partial=true;start_range=.,1
NZ_CAAR01000627.1	Protein Homology	CDS	1	509	.	-	0	ID=cds-WP_000053037.1;Parent=gene-STY7866_RS19970;Dbxref=Genbank:WP_000053037.1;Name=WP_000053037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=STY7866_RS19970;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_000053037.1;start_range=.,1;transl_table=11
NZ_CAAR01000627.1	RefSeq	gene	522	2630	.	-	.	ID=gene-STY7866_RS19975;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=STY7866_RS19975
NZ_CAAR01000627.1	Protein Homology	CDS	522	2630	.	-	0	ID=cds-WP_001086472.1;Parent=gene-STY7866_RS19975;Dbxref=Genbank:WP_001086472.1;Name=WP_001086472.1;gbkey=CDS;gene=rlmKL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455559.1;locus_tag=STY7866_RS19975;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_001086472.1;transl_table=11
NZ_CAAR01000627.1	RefSeq	gene	2729	3838	.	+	.	ID=gene-STY7866_RS19980;Name=STY7866_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19980
NZ_CAAR01000627.1	Protein Homology	CDS	2729	3838	.	+	0	ID=cds-WP_000224086.1;Parent=gene-STY7866_RS19980;Dbxref=Genbank:WP_000224086.1;Name=WP_000224086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455558.1;locus_tag=STY7866_RS19980;product=MOSC domain-containing protein;protein_id=WP_000224086.1;transl_table=11
NZ_CAAR01000627.1	RefSeq	gene	3835	4377	.	-	.	ID=gene-STY7866_RS19985;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=STY7866_RS19985
NZ_CAAR01000627.1	Protein Homology	CDS	3835	4377	.	-	0	ID=cds-WP_001220671.1;Parent=gene-STY7866_RS19985;Dbxref=Genbank:WP_001220671.1;Name=WP_001220671.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=STY7866_RS19985;product=cell division protein ZapC;protein_id=WP_001220671.1;transl_table=11
NZ_CAAR01000627.1	RefSeq	gene	4543	5553	.	-	.	ID=gene-STY7866_RS19990;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=STY7866_RS19990
NZ_CAAR01000627.1	Protein Homology	CDS	4543	5553	.	-	0	ID=cds-WP_000291724.1;Parent=gene-STY7866_RS19990;Dbxref=Genbank:WP_000291724.1;Name=WP_000291724.1;gbkey=CDS;gene=pyrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455556.1;locus_tag=STY7866_RS19990;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_000291724.1;transl_table=11
NZ_CAAR01000627.1	RefSeq	gene	5760	7007	.	-	.	ID=gene-STY7866_RS19995;Name=STY7866_RS19995;end_range=7007,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19995;partial=true
NZ_CAAR01000627.1	Protein Homology	CDS	5760	7007	.	-	0	ID=cds-WP_000310819.1;Parent=gene-STY7866_RS19995;Dbxref=Genbank:WP_000310819.1;Name=WP_000310819.1;end_range=7007,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=STY7866_RS19995;partial=true;product=DUF3458 domain-containing protein;protein_id=WP_000310819.1;transl_table=11
##sequence-region NZ_CAAR01000626.1 1 566
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000626.1	RefSeq	region	1	566	.	+	.	ID=NZ_CAAR01000626.1:1..566;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000626.1	RefSeq	pseudogene	1	163	.	+	.	ID=gene-STY7866_RS19960;Name=STY7866_RS19960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19960;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000626.1	Protein Homology	CDS	1	163	.	+	1	ID=cds-STY7866_RS19960;Parent=gene-STY7866_RS19960;Note=involved in the regulation of length and mediates adhesion%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454634.1;locus_tag=STY7866_RS19960;partial=true;product=fimbrial protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000626.1	RefSeq	gene	164	566	.	+	.	ID=gene-STY7866_RS19965;Name=STY7866_RS19965;end_range=566,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19965;partial=true
NZ_CAAR01000626.1	Protein Homology	CDS	164	566	.	+	0	ID=cds-WP_001082041.1;Parent=gene-STY7866_RS19965;Dbxref=Genbank:WP_001082041.1;Name=WP_001082041.1;end_range=566,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454635.1;locus_tag=STY7866_RS19965;partial=true;product=fimbrial protein BcfE;protein_id=WP_001082041.1;transl_table=11
##sequence-region NZ_CAAR01000625.1 1 800
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000625.1	RefSeq	region	1	800	.	+	.	ID=NZ_CAAR01000625.1:1..800;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000625.1	RefSeq	pseudogene	1	800	.	-	.	ID=gene-STY7866_RS19955;Name=STY7866_RS19955;end_range=800,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19955;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000625.1	Protein Homology	CDS	1	800	.	-	0	ID=cds-STY7866_RS19955;Parent=gene-STY7866_RS19955;Note=molecular chaperone%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=800,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=STY7866_RS19955;partial=true;product=molecular chaperone HtpG;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000624.1 1 634
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000624.1	RefSeq	region	1	634	.	+	.	ID=NZ_CAAR01000624.1:1..634;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000624.1	RefSeq	pseudogene	1	322	.	+	.	ID=gene-STY7866_RS19945;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=pseudogene;locus_tag=STY7866_RS19945;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000624.1	Protein Homology	CDS	1	322	.	+	1	ID=cds-STY7866_RS19945;Parent=gene-STY7866_RS19945;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=pdxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456971.1;locus_tag=STY7866_RS19945;partial=true;product=pyridoxine/pyridoxal/pyridoxamine kinase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000624.1	RefSeq	gene	319	558	.	+	.	ID=gene-STY7866_RS19950;Name=STY7866_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19950
NZ_CAAR01000624.1	Protein Homology	CDS	319	558	.	+	0	ID=cds-WP_000844540.1;Parent=gene-STY7866_RS19950;Dbxref=Genbank:WP_000844540.1;Name=WP_000844540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456970.1;locus_tag=STY7866_RS19950;product=hypothetical protein;protein_id=WP_000844540.1;transl_table=11
##sequence-region NZ_CAAR01000623.1 1 1059
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000623.1	RefSeq	region	1	1059	.	+	.	ID=NZ_CAAR01000623.1:1..1059;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000623.1	RefSeq	gene	1	253	.	-	.	ID=gene-STY7866_RS19935;Name=STY7866_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19935;partial=true;start_range=.,1
NZ_CAAR01000623.1	Protein Homology	CDS	1	253	.	-	0	ID=cds-WP_000992455.1;Parent=gene-STY7866_RS19935;Dbxref=Genbank:WP_000992455.1;Name=WP_000992455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455955.1;locus_tag=STY7866_RS19935;partial=true;product=DUF4186 domain-containing protein;protein_id=WP_000992455.1;start_range=.,1;transl_table=11
NZ_CAAR01000623.1	RefSeq	gene	253	1059	.	-	.	ID=gene-STY7866_RS19940;Name=glsB;end_range=1059,.;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=STY7866_RS19940;partial=true
NZ_CAAR01000623.1	Protein Homology	CDS	253	1059	.	-	0	ID=cds-WP_000652641.1;Parent=gene-STY7866_RS19940;Dbxref=Genbank:WP_000652641.1;Name=WP_000652641.1;end_range=1059,.;gbkey=CDS;gene=glsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=STY7866_RS19940;partial=true;product=glutaminase B;protein_id=WP_000652641.1;transl_table=11
##sequence-region NZ_CAAR01000622.1 1 1062
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000622.1	RefSeq	region	1	1062	.	+	.	ID=NZ_CAAR01000622.1:1..1062;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000622.1	RefSeq	pseudogene	1	611	.	+	.	ID=gene-STY7866_RS19930;Name=STY7866_RS19930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19930;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000622.1	Protein Homology	CDS	1	611	.	+	2	ID=cds-STY7866_RS19930;Parent=gene-STY7866_RS19930;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457451.1;locus_tag=STY7866_RS19930;partial=true;product=glycine dehydrogenase (aminomethyl-transferring);pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000622.1	RefSeq	gene	837	983	.	+	.	ID=gene-STY7866_RS27790;Name=STY7866_RS27790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27790
NZ_CAAR01000622.1	Protein Homology	CDS	837	983	.	+	0	ID=cds-WP_024131212.1;Parent=gene-STY7866_RS27790;Dbxref=Genbank:WP_024131212.1;Name=WP_024131212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751796.1;locus_tag=STY7866_RS27790;product=hypothetical protein;protein_id=WP_024131212.1;transl_table=11
##sequence-region NZ_CAAR01000621.1 1 4035
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000621.1	RefSeq	region	1	4035	.	+	.	ID=NZ_CAAR01000621.1:1..4035;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000621.1	RefSeq	gene	256	786	.	-	.	ID=gene-STY7866_RS19905;Name=STY7866_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19905
NZ_CAAR01000621.1	Protein Homology	CDS	256	786	.	-	0	ID=cds-WP_000907666.1;Parent=gene-STY7866_RS19905;Dbxref=Genbank:WP_000907666.1;Name=WP_000907666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458934.1;locus_tag=STY7866_RS19905;product=type VI secretion system tube protein Hcp;protein_id=WP_000907666.1;transl_table=11
NZ_CAAR01000621.1	RefSeq	gene	1504	2517	.	+	.	ID=gene-STY7866_RS19915;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=STY7866_RS19915
NZ_CAAR01000621.1	Protein Homology	CDS	1504	2517	.	+	0	ID=cds-WP_001094618.1;Parent=gene-STY7866_RS19915;Dbxref=Genbank:WP_001094618.1;Name=WP_001094618.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458932.1;locus_tag=STY7866_RS19915;product=tryptophan--tRNA ligase;protein_id=WP_001094618.1;transl_table=11
NZ_CAAR01000621.1	RefSeq	gene	2518	3291	.	-	.	ID=gene-STY7866_RS19920;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=STY7866_RS19920
NZ_CAAR01000621.1	Protein Homology	CDS	2518	3291	.	-	0	ID=cds-WP_000841652.1;Parent=gene-STY7866_RS19920;Dbxref=Genbank:WP_000841652.1;Name=WP_000841652.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458931.1;locus_tag=STY7866_RS19920;product=Uxu operon transcriptional regulator;protein_id=WP_000841652.1;transl_table=11
NZ_CAAR01000621.1	RefSeq	pseudogene	3641	4035	.	+	.	ID=gene-STY7866_RS26505;Name=STY7866_RS26505;end_range=4035,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26505;partial=true;pseudo=true
NZ_CAAR01000621.1	Protein Homology	CDS	3641	4035	.	+	0	ID=cds-STY7866_RS26505;Parent=gene-STY7866_RS26505;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4035,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458930.1;locus_tag=STY7866_RS26505;partial=true;product=dienelactone hydrolase family protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000620.1 1 1628
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000620.1	RefSeq	region	1	1628	.	+	.	ID=NZ_CAAR01000620.1:1..1628;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000620.1	RefSeq	pseudogene	1	674	.	-	.	ID=gene-STY7866_RS19895;Name=STY7866_RS19895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19895;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000620.1	Protein Homology	CDS	1	674	.	-	0	ID=cds-STY7866_RS19895;Parent=gene-STY7866_RS19895;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458949.1;locus_tag=STY7866_RS19895;partial=true;product=type I restriction-modification system endonuclease;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000620.1	RefSeq	gene	872	1628	.	+	.	ID=gene-STY7866_RS19900;Name=STY7866_RS19900;end_range=1628,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19900;partial=true
NZ_CAAR01000620.1	Protein Homology	CDS	872	1628	.	+	0	ID=cds-WP_000290514.1;Parent=gene-STY7866_RS19900;Dbxref=Genbank:WP_000290514.1;Name=WP_000290514.1;end_range=1628,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458950.1;locus_tag=STY7866_RS19900;partial=true;product=restriction endonuclease;protein_id=WP_000290514.1;transl_table=11
##sequence-region NZ_CAAR01000619.1 1 927
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000619.1	RefSeq	region	1	927	.	+	.	ID=NZ_CAAR01000619.1:1..927;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000619.1	RefSeq	gene	122	904	.	-	.	ID=gene-STY7866_RS19890;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=STY7866_RS19890
NZ_CAAR01000619.1	Protein Homology	CDS	122	904	.	-	0	ID=cds-WP_000731871.1;Parent=gene-STY7866_RS19890;Dbxref=Genbank:WP_000731871.1;Name=WP_000731871.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456896.1;locus_tag=STY7866_RS19890;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000731871.1;transl_table=11
##sequence-region NZ_CAAR01000618.1 1 245
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000618.1	RefSeq	region	1	245	.	+	.	ID=NZ_CAAR01000618.1:1..245;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000618.1	RefSeq	pseudogene	1	245	.	-	.	ID=gene-STY7866_RS27785;Name=STY7866_RS27785;end_range=245,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27785;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000618.1	Protein Homology	CDS	1	245	.	-	2	ID=cds-STY7866_RS27785;Parent=gene-STY7866_RS27785;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=245,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458902.1;locus_tag=STY7866_RS27785;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000617.1 1 711
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000617.1	RefSeq	region	1	711	.	+	.	ID=NZ_CAAR01000617.1:1..711;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000617.1	RefSeq	gene	1	679	.	-	.	ID=gene-STY7866_RS19880;Name=STY7866_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19880;partial=true;start_range=.,1
NZ_CAAR01000617.1	Protein Homology	CDS	1	679	.	-	0	ID=cds-WP_000965497.1;Parent=gene-STY7866_RS19880;Dbxref=Genbank:WP_000965497.1;Name=WP_000965497.1;Note=The N-terminal region of this protein%2C as described by TIGR01726%2C is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits%2C which specificities that include histidine%2C arginine%2C glutamine%2C glutamate%2C L-cystine (sic)%2C the opines (in Agrobacterium) octopine and nopaline%2C etc.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456895.1;locus_tag=STY7866_RS19880;partial=true;product=ABC transporter permease subunit;protein_id=WP_000965497.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000616.1 1 7097
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000616.1	RefSeq	region	1	7097	.	+	.	ID=NZ_CAAR01000616.1:1..7097;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000616.1	RefSeq	gene	1	111	.	-	.	ID=gene-STY7866_RS19850;Name=STY7866_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19850;partial=true;start_range=.,1
NZ_CAAR01000616.1	Protein Homology	CDS	1	111	.	-	0	ID=cds-WP_001765144.1;Parent=gene-STY7866_RS19850;Dbxref=Genbank:WP_001765144.1;Name=WP_001765144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455782.1;locus_tag=STY7866_RS19850;partial=true;product=DUF2498 family protein;protein_id=WP_001765144.1;start_range=.,1;transl_table=11
NZ_CAAR01000616.1	RefSeq	gene	514	3111	.	+	.	ID=gene-STY7866_RS19855;Name=STY7866_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19855
NZ_CAAR01000616.1	Protein Homology	CDS	514	3111	.	+	0	ID=cds-WP_000513593.1;Parent=gene-STY7866_RS19855;Dbxref=Genbank:WP_000513593.1;Name=WP_000513593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=STY7866_RS19855;product=type I DNA topoisomerase;protein_id=WP_000513593.1;transl_table=11
NZ_CAAR01000616.1	RefSeq	gene	3522	4496	.	+	.	ID=gene-STY7866_RS19860;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=STY7866_RS19860
NZ_CAAR01000616.1	Protein Homology	CDS	3522	4496	.	+	0	ID=cds-WP_000776231.1;Parent=gene-STY7866_RS19860;Dbxref=Genbank:WP_000776231.1;Name=WP_000776231.1;gbkey=CDS;gene=cysB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=STY7866_RS19860;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776231.1;transl_table=11
NZ_CAAR01000616.1	RefSeq	gene	4756	4917	.	+	.	ID=gene-STY7866_RS19865;Name=STY7866_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19865
NZ_CAAR01000616.1	Protein Homology	CDS	4756	4917	.	+	0	ID=cds-WP_085920527.1;Parent=gene-STY7866_RS19865;Dbxref=Genbank:WP_085920527.1;Name=WP_085920527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308615.1;locus_tag=STY7866_RS19865;product=YmiA family putative membrane protein;protein_id=WP_085920527.1;transl_table=11
NZ_CAAR01000616.1	RefSeq	gene	4918	5088	.	+	.	ID=gene-STY7866_RS27780;Name=STY7866_RS27780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27780
NZ_CAAR01000616.1	Protein Homology	CDS	4918	5088	.	+	0	ID=cds-WP_000029027.1;Parent=gene-STY7866_RS27780;Dbxref=Genbank:WP_000029027.1;Name=WP_000029027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991982.1;locus_tag=STY7866_RS27780;product=hypothetical protein;protein_id=WP_000029027.1;transl_table=11
NZ_CAAR01000616.1	RefSeq	gene	5473	7097	.	+	.	ID=gene-STY7866_RS19875;Name=acnA;end_range=7097,.;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=STY7866_RS19875;partial=true
NZ_CAAR01000616.1	Protein Homology	CDS	5473	7097	.	+	0	ID=cds-WP_001765147.1;Parent=gene-STY7866_RS19875;Dbxref=Genbank:WP_001765147.1;Name=WP_001765147.1;end_range=7097,.;gbkey=CDS;gene=acnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455785.1;locus_tag=STY7866_RS19875;partial=true;product=aconitate hydratase AcnA;protein_id=WP_001765147.1;transl_table=11
##sequence-region NZ_CAAR01000615.1 1 9787
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000615.1	RefSeq	region	1	9787	.	+	.	ID=NZ_CAAR01000615.1:1..9787;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000615.1	RefSeq	gene	61	1725	.	+	.	ID=gene-STY7866_RS19800;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=STY7866_RS19800
NZ_CAAR01000615.1	Protein Homology	CDS	61	1725	.	+	0	ID=cds-WP_000580919.1;Parent=gene-STY7866_RS19800;Dbxref=Genbank:WP_000580919.1;Name=WP_000580919.1;gbkey=CDS;gene=fdrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455121.1;locus_tag=STY7866_RS19800;product=acyl-CoA synthetase FdrA;protein_id=WP_000580919.1;transl_table=11
NZ_CAAR01000615.1	RefSeq	gene	1735	2994	.	+	.	ID=gene-STY7866_RS19805;Name=STY7866_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19805
NZ_CAAR01000615.1	Protein Homology	CDS	1735	2994	.	+	0	ID=cds-WP_024131192.1;Parent=gene-STY7866_RS19805;Dbxref=Genbank:WP_024131192.1;Name=WP_024131192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=STY7866_RS19805;product=DUF1116 domain-containing protein;protein_id=WP_024131192.1;transl_table=11
NZ_CAAR01000615.1	RefSeq	gene	3006	3815	.	+	.	ID=gene-STY7866_RS19810;Name=STY7866_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19810
NZ_CAAR01000615.1	Protein Homology	CDS	3006	3815	.	+	0	ID=cds-WP_000821188.1;Parent=gene-STY7866_RS19810;Dbxref=Genbank:WP_000821188.1;Name=WP_000821188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455123.1;locus_tag=STY7866_RS19810;product=DUF2877 domain-containing protein;protein_id=WP_000821188.1;transl_table=11
NZ_CAAR01000615.1	RefSeq	pseudogene	3819	4711	.	+	.	ID=gene-STY7866_RS19815;Name=STY7866_RS19815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19815;pseudo=true
NZ_CAAR01000615.1	Protein Homology	CDS	3819	4711	.	+	0	ID=cds-STY7866_RS19815;Parent=gene-STY7866_RS19815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455124.1;locus_tag=STY7866_RS19815;product=carbamate kinase;pseudo=true;transl_table=11
NZ_CAAR01000615.1	RefSeq	gene	4752	5819	.	-	.	ID=gene-STY7866_RS19820;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=STY7866_RS19820
NZ_CAAR01000615.1	Protein Homology	CDS	4752	5819	.	-	0	ID=cds-WP_000815594.1;Parent=gene-STY7866_RS19820;Dbxref=Genbank:WP_000815594.1;Name=WP_000815594.1;gbkey=CDS;gene=purK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455125.1;locus_tag=STY7866_RS19820;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815594.1;transl_table=11
NZ_CAAR01000615.1	RefSeq	gene	5816	6325	.	-	.	ID=gene-STY7866_RS19825;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=STY7866_RS19825
NZ_CAAR01000615.1	Protein Homology	CDS	5816	6325	.	-	0	ID=cds-WP_000098739.1;Parent=gene-STY7866_RS19825;Dbxref=Genbank:WP_000098739.1;Name=WP_000098739.1;gbkey=CDS;gene=purE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455126.1;locus_tag=STY7866_RS19825;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_000098739.1;transl_table=11
NZ_CAAR01000615.1	RefSeq	gene	6443	7165	.	-	.	ID=gene-STY7866_RS19830;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=STY7866_RS19830
NZ_CAAR01000615.1	Protein Homology	CDS	6443	7165	.	-	0	ID=cds-WP_000212291.1;Parent=gene-STY7866_RS19830;Dbxref=Genbank:WP_000212291.1;Name=WP_000212291.1;gbkey=CDS;gene=lpxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455127.1;locus_tag=STY7866_RS19830;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212291.1;transl_table=11
NZ_CAAR01000615.1	RefSeq	gene	7168	7662	.	-	.	ID=gene-STY7866_RS19835;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=STY7866_RS19835
NZ_CAAR01000615.1	Protein Homology	CDS	7168	7662	.	-	0	ID=cds-WP_000255991.1;Parent=gene-STY7866_RS19835;Dbxref=Genbank:WP_000255991.1;Name=WP_000255991.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=STY7866_RS19835;product=peptidylprolyl isomerase B;protein_id=WP_000255991.1;transl_table=11
NZ_CAAR01000615.1	RefSeq	gene	7835	9220	.	+	.	ID=gene-STY7866_RS19840;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=STY7866_RS19840
NZ_CAAR01000615.1	Protein Homology	CDS	7835	9220	.	+	0	ID=cds-WP_000912377.1;Parent=gene-STY7866_RS19840;Dbxref=Genbank:WP_000912377.1;Name=WP_000912377.1;gbkey=CDS;gene=cysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=STY7866_RS19840;product=cysteine--tRNA ligase;protein_id=WP_000912377.1;transl_table=11
NZ_CAAR01000615.1	RefSeq	gene	9311	9787	.	-	.	ID=gene-STY7866_RS19845;Name=STY7866_RS19845;end_range=9787,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19845;partial=true
NZ_CAAR01000615.1	Protein Homology	CDS	9311	9787	.	-	0	ID=cds-WP_000298864.1;Parent=gene-STY7866_RS19845;Dbxref=Genbank:WP_000298864.1;Name=WP_000298864.1;end_range=9787,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455130.1;locus_tag=STY7866_RS19845;partial=true;product=metal-dependent hydrolase;protein_id=WP_000298864.1;transl_table=11
##sequence-region NZ_CAAR01000614.1 1 859
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000614.1	RefSeq	region	1	859	.	+	.	ID=NZ_CAAR01000614.1:1..859;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000614.1	RefSeq	gene	1	504	.	+	.	ID=gene-STY7866_RS19790;Name=STY7866_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19790;partial=true;start_range=.,1
NZ_CAAR01000614.1	Protein Homology	CDS	1	504	.	+	0	ID=cds-WP_000696914.1;Parent=gene-STY7866_RS19790;Dbxref=Genbank:WP_000696914.1;Name=WP_000696914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456783.1;locus_tag=STY7866_RS19790;partial=true;product=hypothetical protein;protein_id=WP_000696914.1;start_range=.,1;transl_table=11
NZ_CAAR01000614.1	RefSeq	gene	613	859	.	-	.	ID=gene-STY7866_RS19795;Name=rplY;end_range=859,.;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=STY7866_RS19795;partial=true
NZ_CAAR01000614.1	Protein Homology	CDS	613	859	.	-	1	ID=cds-WP_000585369.1;Parent=gene-STY7866_RS19795;Dbxref=Genbank:WP_000585369.1;Name=WP_000585369.1;end_range=859,.;gbkey=CDS;gene=rplY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=STY7866_RS19795;partial=true;product=50S ribosomal protein L25;protein_id=WP_000585369.1;transl_table=11
##sequence-region NZ_CAAR01000613.1 1 1631
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000613.1	RefSeq	region	1	1631	.	+	.	ID=NZ_CAAR01000613.1:1..1631;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000613.1	RefSeq	gene	236	1483	.	+	.	ID=gene-STY7866_RS19780;Name=STY7866_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19780
NZ_CAAR01000613.1	Protein Homology	CDS	236	1483	.	+	0	ID=cds-WP_001156970.1;Parent=gene-STY7866_RS19780;Dbxref=Genbank:WP_001156970.1;Name=WP_001156970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455153.1;locus_tag=STY7866_RS19780;product=mechanosensitive ion channel family protein;protein_id=WP_001156970.1;transl_table=11
##sequence-region NZ_CAAR01000612.1 1 796
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000612.1	RefSeq	region	1	796	.	+	.	ID=NZ_CAAR01000612.1:1..796;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000612.1	RefSeq	pseudogene	3	796	.	+	.	ID=gene-STY7866_RS19775;Name=fdhE;end_range=796,.;gbkey=Gene;gene=fdhE;gene_biotype=pseudogene;locus_tag=STY7866_RS19775;partial=true;pseudo=true
NZ_CAAR01000612.1	Protein Homology	CDS	3	796	.	+	0	ID=cds-STY7866_RS19775;Parent=gene-STY7866_RS19775;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=796,.;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=STY7866_RS19775;partial=true;product=formate dehydrogenase accessory protein FdhE;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000611.1 1 1253
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000611.1	RefSeq	region	1	1253	.	+	.	ID=NZ_CAAR01000611.1:1..1253;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000611.1	RefSeq	pseudogene	1	973	.	-	.	ID=gene-STY7866_RS19770;Name=STY7866_RS19770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19770;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000611.1	Protein Homology	CDS	1	973	.	-	0	ID=cds-STY7866_RS19770;Parent=gene-STY7866_RS19770;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=STY7866_RS19770;partial=true;product=HAMP domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000610.1 1 2543
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000610.1	RefSeq	region	1	2543	.	+	.	ID=NZ_CAAR01000610.1:1..2543;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000610.1	RefSeq	pseudogene	430	2262	.	+	.	ID=gene-STY7866_RS19765;Name=STY7866_RS19765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19765;pseudo=true
NZ_CAAR01000610.1	Protein Homology	CDS	430	2262	.	+	0	ID=cds-STY7866_RS19765;Parent=gene-STY7866_RS19765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835222.1;locus_tag=STY7866_RS19765;product=DUF4765 family protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000609.1 1 1451
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000609.1	RefSeq	region	1	1451	.	+	.	ID=NZ_CAAR01000609.1:1..1451;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000609.1	RefSeq	gene	1	1183	.	+	.	ID=gene-STY7866_RS19760;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=STY7866_RS19760;partial=true;start_range=.,1
NZ_CAAR01000609.1	Protein Homology	CDS	1	1183	.	+	1	ID=cds-WP_000474587.1;Parent=gene-STY7866_RS19760;Dbxref=Genbank:WP_000474587.1;Name=WP_000474587.1;gbkey=CDS;gene=modF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455320.1;locus_tag=STY7866_RS19760;partial=true;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_000474587.1;start_range=.,1;transl_table=11
NZ_CAAR01000609.1	RefSeq	pseudogene	1354	1451	.	+	.	ID=gene-STY7866_RS27775;Name=STY7866_RS27775;end_range=1451,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27775;partial=true;pseudo=true
NZ_CAAR01000609.1	Protein Homology	CDS	1354	1451	.	+	0	ID=cds-STY7866_RS27775;Parent=gene-STY7866_RS27775;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1451,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455319.1;locus_tag=STY7866_RS27775;partial=true;product=DUF2167 domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000608.1 1 1686
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000608.1	RefSeq	region	1	1686	.	+	.	ID=NZ_CAAR01000608.1:1..1686;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000608.1	RefSeq	pseudogene	1	123	.	-	.	ID=gene-STY7866_RS19750;Name=STY7866_RS19750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19750;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000608.1	Protein Homology	CDS	1	123	.	-	0	ID=cds-STY7866_RS19750;Parent=gene-STY7866_RS19750;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=STY7866_RS19750;partial=true;product=anthranilate synthase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000608.1	RefSeq	gene	123	1655	.	-	.	ID=gene-STY7866_RS19755;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=STY7866_RS19755
NZ_CAAR01000608.1	Protein Homology	CDS	123	1655	.	-	0	ID=cds-WP_049783590.1;Parent=gene-STY7866_RS19755;Dbxref=Genbank:WP_049783590.1;Name=WP_049783590.1;gbkey=CDS;gene=trpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455775.1;locus_tag=STY7866_RS19755;product=anthranilate synthase component I;protein_id=WP_049783590.1;transl_table=11
##sequence-region NZ_CAAR01000607.1 1 882
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000607.1	RefSeq	region	1	882	.	+	.	ID=NZ_CAAR01000607.1:1..882;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000607.1	RefSeq	pseudogene	1	114	.	+	.	ID=gene-STY7866_RS19740;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=pseudogene;locus_tag=STY7866_RS19740;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000607.1	Protein Homology	CDS	1	114	.	+	0	ID=cds-STY7866_RS19740;Parent=gene-STY7866_RS19740;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454984.1;locus_tag=STY7866_RS19740;partial=true;product=protein YaiA;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000607.1	RefSeq	gene	365	882	.	+	.	ID=gene-STY7866_RS19745;Name=STY7866_RS19745;end_range=882,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19745;partial=true
NZ_CAAR01000607.1	Protein Homology	CDS	365	882	.	+	0	ID=cds-WP_001276433.1;Parent=gene-STY7866_RS19745;Dbxref=Genbank:WP_001276433.1;Name=WP_001276433.1;end_range=882,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454985.1;locus_tag=STY7866_RS19745;partial=true;product=hypothetical protein;protein_id=WP_001276433.1;transl_table=11
##sequence-region NZ_CAAR01000606.1 1 298
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000606.1	RefSeq	region	1	298	.	+	.	ID=NZ_CAAR01000606.1:1..298;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000606.1	RefSeq	gene	1	298	.	-	.	ID=gene-STY7866_RS19735;Name=STY7866_RS19735;end_range=298,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19735;partial=true;start_range=.,1
NZ_CAAR01000606.1	Protein Homology	CDS	1	298	.	-	0	ID=cds-WP_000293756.1;Parent=gene-STY7866_RS19735;Dbxref=Genbank:WP_000293756.1;Name=WP_000293756.1;end_range=298,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456325.1;locus_tag=STY7866_RS19735;partial=true;product=AMP-binding protein;protein_id=WP_000293756.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000605.1 1 892
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000605.1	RefSeq	region	1	892	.	+	.	ID=NZ_CAAR01000605.1:1..892;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000605.1	RefSeq	pseudogene	1	892	.	-	.	ID=gene-STY7866_RS19730;Name=pepN;end_range=892,.;gbkey=Gene;gene=pepN;gene_biotype=pseudogene;locus_tag=STY7866_RS19730;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000605.1	Protein Homology	CDS	1	892	.	-	0	ID=cds-STY7866_RS19730;Parent=gene-STY7866_RS19730;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=892,.;gbkey=CDS;gene=pepN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=STY7866_RS19730;partial=true;product=aminopeptidase N;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000604.1 1 312
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000604.1	RefSeq	region	1	312	.	+	.	ID=NZ_CAAR01000604.1:1..312;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000604.1	RefSeq	gene	1	312	.	+	.	ID=gene-STY7866_RS19725;Name=STY7866_RS19725;end_range=312,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19725;partial=true;start_range=.,1
NZ_CAAR01000604.1	Protein Homology	CDS	1	312	.	+	2	ID=cds-WP_000641821.1;Parent=gene-STY7866_RS19725;Dbxref=Genbank:WP_000641821.1;Name=WP_000641821.1;end_range=312,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456989.1;locus_tag=STY7866_RS19725;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_000641821.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000603.1 1 1508
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000603.1	RefSeq	region	1	1508	.	+	.	ID=NZ_CAAR01000603.1:1..1508;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000603.1	RefSeq	gene	1	189	.	-	.	ID=gene-STY7866_RS26500;Name=STY7866_RS26500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26500;partial=true;start_range=.,1
NZ_CAAR01000603.1	Protein Homology	CDS	1	189	.	-	0	ID=cds-WP_001145344.1;Parent=gene-STY7866_RS26500;Dbxref=Genbank:WP_001145344.1;Name=WP_001145344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=STY7866_RS26500;partial=true;product=hypothetical protein;protein_id=WP_001145344.1;start_range=.,1;transl_table=11
NZ_CAAR01000603.1	RefSeq	gene	340	504	.	-	.	ID=gene-STY7866_RS19715;Name=STY7866_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19715
NZ_CAAR01000603.1	Protein Homology	CDS	340	504	.	-	0	ID=cds-WP_000620015.1;Parent=gene-STY7866_RS19715;Dbxref=Genbank:WP_000620015.1;Name=WP_000620015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=STY7866_RS19715;product=DUF2556 domain-containing protein;protein_id=WP_000620015.1;transl_table=11
NZ_CAAR01000603.1	RefSeq	gene	587	1471	.	-	.	ID=gene-STY7866_RS19720;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=STY7866_RS19720
NZ_CAAR01000603.1	Protein Homology	CDS	587	1471	.	-	0	ID=cds-WP_000642611.1;Parent=gene-STY7866_RS19720;Dbxref=Genbank:WP_000642611.1;Name=WP_000642611.1;gbkey=CDS;gene=yhdJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457762.1;locus_tag=STY7866_RS19720;product=adenine-specific DNA-methyltransferase;protein_id=WP_000642611.1;transl_table=11
##sequence-region NZ_CAAR01000602.1 1 615
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000602.1	RefSeq	region	1	615	.	+	.	ID=NZ_CAAR01000602.1:1..615;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000602.1	RefSeq	gene	1	182	.	+	.	ID=gene-STY7866_RS27770;Name=STY7866_RS27770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27770;partial=true;start_range=.,1
NZ_CAAR01000602.1	Protein Homology	CDS	1	182	.	+	2	ID=cds-WP_001765128.1;Parent=gene-STY7866_RS27770;Dbxref=Genbank:WP_001765128.1;Name=WP_001765128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341509.1;locus_tag=STY7866_RS27770;partial=true;product=hypothetical protein;protein_id=WP_001765128.1;start_range=.,1;transl_table=11
NZ_CAAR01000602.1	RefSeq	pseudogene	154	615	.	+	.	ID=gene-STY7866_RS19705;Name=STY7866_RS19705;end_range=615,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19705;partial=true;pseudo=true
NZ_CAAR01000602.1	Protein Homology	CDS	154	615	.	+	0	ID=cds-STY7866_RS19705;Parent=gene-STY7866_RS19705;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=615,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341510.1;locus_tag=STY7866_RS19705;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000601.1 1 1840
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000601.1	RefSeq	region	1	1840	.	+	.	ID=NZ_CAAR01000601.1:1..1840;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000601.1	RefSeq	pseudogene	1	929	.	+	.	ID=gene-STY7866_RS26495;Name=STY7866_RS26495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26495;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000601.1	Protein Homology	CDS	1	929	.	+	2	ID=cds-STY7866_RS26495;Parent=gene-STY7866_RS26495;Note=DNA-binding membrane protein required for chromosome resolution and partitioning%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455448.1;locus_tag=STY7866_RS26495;partial=true;product=DNA translocase FtsK;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000601.1	RefSeq	gene	1074	1685	.	+	.	ID=gene-STY7866_RS19695;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=STY7866_RS19695
NZ_CAAR01000601.1	Protein Homology	CDS	1074	1685	.	+	0	ID=cds-WP_001765126.1;Parent=gene-STY7866_RS19695;Dbxref=Genbank:WP_001765126.1;Name=WP_001765126.1;gbkey=CDS;gene=lolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=STY7866_RS19695;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001765126.1;transl_table=11
NZ_CAAR01000601.1	RefSeq	pseudogene	1695	1840	.	+	.	ID=gene-STY7866_RS19700;Name=STY7866_RS19700;end_range=1840,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19700;partial=true;pseudo=true
NZ_CAAR01000601.1	Protein Homology	CDS	1695	1840	.	+	0	ID=cds-STY7866_RS19700;Parent=gene-STY7866_RS19700;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1840,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123573.1;locus_tag=STY7866_RS19700;partial=true;product=recombination factor protein RarA;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000600.1 1 2947
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000600.1	RefSeq	region	1	2947	.	+	.	ID=NZ_CAAR01000600.1:1..2947;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000600.1	RefSeq	pseudogene	1	1062	.	-	.	ID=gene-STY7866_RS19665;Name=recC;gbkey=Gene;gene=recC;gene_biotype=pseudogene;locus_tag=STY7866_RS19665;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000600.1	Protein Homology	CDS	1	1062	.	-	0	ID=cds-STY7866_RS19665;Parent=gene-STY7866_RS19665;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=recC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457389.1;locus_tag=STY7866_RS19665;partial=true;product=exonuclease V subunit gamma;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000600.1	RefSeq	gene	1078	1398	.	-	.	ID=gene-STY7866_RS19670;Name=STY7866_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19670
NZ_CAAR01000600.1	Protein Homology	CDS	1078	1398	.	-	0	ID=cds-WP_000019280.1;Parent=gene-STY7866_RS19670;Dbxref=Genbank:WP_000019280.1;Name=WP_000019280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457390.1;locus_tag=STY7866_RS19670;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_000019280.1;transl_table=11
NZ_CAAR01000600.1	RefSeq	gene	1383	1790	.	-	.	ID=gene-STY7866_RS19675;Name=STY7866_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19675
NZ_CAAR01000600.1	Protein Homology	CDS	1383	1790	.	-	0	ID=cds-WP_001078536.1;Parent=gene-STY7866_RS19675;Dbxref=Genbank:WP_001078536.1;Name=WP_001078536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457391.1;locus_tag=STY7866_RS19675;product=DUF2509 family protein;protein_id=WP_001078536.1;transl_table=11
NZ_CAAR01000600.1	RefSeq	gene	1787	2350	.	-	.	ID=gene-STY7866_RS19680;Name=STY7866_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19680
NZ_CAAR01000600.1	Protein Homology	CDS	1787	2350	.	-	0	ID=cds-WP_000029148.1;Parent=gene-STY7866_RS19680;Dbxref=Genbank:WP_000029148.1;Name=WP_000029148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457392.1;locus_tag=STY7866_RS19680;product=prepilin peptidase-dependent protein;protein_id=WP_000029148.1;transl_table=11
NZ_CAAR01000600.1	RefSeq	gene	2341	2811	.	-	.	ID=gene-STY7866_RS19685;Name=STY7866_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19685
NZ_CAAR01000600.1	Protein Homology	CDS	2341	2811	.	-	0	ID=cds-WP_000744668.1;Parent=gene-STY7866_RS19685;Dbxref=Genbank:WP_000744668.1;Name=WP_000744668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=STY7866_RS19685;product=prepilin peptidase-dependent protein;protein_id=WP_000744668.1;transl_table=11
##sequence-region NZ_CAAR01000599.1 1 10625
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000599.1	RefSeq	region	1	10625	.	+	.	ID=NZ_CAAR01000599.1:1..10625;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000599.1	RefSeq	gene	1	227	.	+	.	ID=gene-STY7866_RS19595;Name=STY7866_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19595;partial=true;start_range=.,1
NZ_CAAR01000599.1	Protein Homology	CDS	1	227	.	+	2	ID=cds-WP_000303829.1;Parent=gene-STY7866_RS19595;Dbxref=Genbank:WP_000303829.1;Name=WP_000303829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456120.1;locus_tag=STY7866_RS19595;partial=true;product=EscI/YscI/HrpB family type III secretion system inner rod protein;protein_id=WP_000303829.1;start_range=.,1;transl_table=11
NZ_CAAR01000599.1	RefSeq	pseudogene	224	971	.	+	.	ID=gene-STY7866_RS19600;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=pseudogene;locus_tag=STY7866_RS19600;pseudo=true
NZ_CAAR01000599.1	Protein Homology	CDS	224	971	.	+	0	ID=cds-STY7866_RS19600;Parent=gene-STY7866_RS19600;Note=frameshifted;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456119.1;locus_tag=STY7866_RS19600;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;pseudo=true;transl_table=11
NZ_CAAR01000599.1	RefSeq	gene	989	1537	.	+	.	ID=gene-STY7866_RS19605;Name=STY7866_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19605
NZ_CAAR01000599.1	Protein Homology	CDS	989	1537	.	+	0	ID=cds-WP_001765123.1;Parent=gene-STY7866_RS19605;Dbxref=Genbank:WP_001765123.1;Name=WP_001765123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456118.1;locus_tag=STY7866_RS19605;product=pathogenicity island protein;protein_id=WP_001765123.1;transl_table=11
NZ_CAAR01000599.1	RefSeq	gene	1534	2208	.	+	.	ID=gene-STY7866_RS19610;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=STY7866_RS19610
NZ_CAAR01000599.1	Protein Homology	CDS	1534	2208	.	+	0	ID=cds-WP_000011199.1;Parent=gene-STY7866_RS19610;Dbxref=Genbank:WP_000011199.1;Name=WP_000011199.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456117.1;locus_tag=STY7866_RS19610;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WP_000011199.1;transl_table=11
NZ_CAAR01000599.1	RefSeq	gene	2174	3190	.	+	.	ID=gene-STY7866_RS19615;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=STY7866_RS19615
NZ_CAAR01000599.1	Protein Homology	CDS	2174	3190	.	+	0	ID=cds-WP_001682022.1;Parent=gene-STY7866_RS19615;Dbxref=Genbank:WP_001682022.1;Name=WP_001682022.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=STY7866_RS19615;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WP_001682022.1;transl_table=11
NZ_CAAR01000599.1	RefSeq	gene	3248	3616	.	+	.	ID=gene-STY7866_RS19620;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=STY7866_RS19620
NZ_CAAR01000599.1	Protein Homology	CDS	3248	3616	.	+	0	ID=cds-WP_000383695.1;Parent=gene-STY7866_RS19620;Dbxref=Genbank:WP_000383695.1;Name=WP_000383695.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456115.1;locus_tag=STY7866_RS19620;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WP_000383695.1;transl_table=11
NZ_CAAR01000599.1	RefSeq	gene	3601	5646	.	+	.	ID=gene-STY7866_RS19625;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=STY7866_RS19625
NZ_CAAR01000599.1	Protein Homology	CDS	3601	5646	.	+	0	ID=cds-WP_001258227.1;Parent=gene-STY7866_RS19625;Dbxref=Genbank:WP_001258227.1;Name=WP_001258227.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456114.1;locus_tag=STY7866_RS19625;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WP_001258227.1;transl_table=11
NZ_CAAR01000599.1	RefSeq	gene	5636	6937	.	+	.	ID=gene-STY7866_RS19630;Name=STY7866_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19630
NZ_CAAR01000599.1	Protein Homology	CDS	5636	6937	.	+	0	ID=cds-WP_000787208.1;Parent=gene-STY7866_RS19630;Dbxref=Genbank:WP_000787208.1;Name=WP_000787208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456113.1;locus_tag=STY7866_RS19630;product=EscN/YscN/HrcN family type III secretion system ATPase;protein_id=WP_000787208.1;transl_table=11
NZ_CAAR01000599.1	RefSeq	gene	6940	7317	.	+	.	ID=gene-STY7866_RS19635;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=STY7866_RS19635
NZ_CAAR01000599.1	Protein Homology	CDS	6940	7317	.	+	0	ID=cds-WP_000449096.1;Parent=gene-STY7866_RS19635;Dbxref=Genbank:WP_000449096.1;Name=WP_000449096.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456112.1;locus_tag=STY7866_RS19635;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WP_000449096.1;transl_table=11
NZ_CAAR01000599.1	RefSeq	gene	7298	7672	.	+	.	ID=gene-STY7866_RS19640;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=STY7866_RS19640
NZ_CAAR01000599.1	Protein Homology	CDS	7298	7672	.	+	0	ID=cds-WP_001223304.1;Parent=gene-STY7866_RS19640;Dbxref=Genbank:WP_001223304.1;Name=WP_001223304.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456111.1;locus_tag=STY7866_RS19640;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WP_001223304.1;transl_table=11
NZ_CAAR01000599.1	RefSeq	gene	7653	8621	.	+	.	ID=gene-STY7866_RS19645;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=STY7866_RS19645
NZ_CAAR01000599.1	Protein Homology	CDS	7653	8621	.	+	0	ID=cds-WP_000944194.1;Parent=gene-STY7866_RS19645;Dbxref=Genbank:WP_000944194.1;Name=WP_000944194.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456110.1;locus_tag=STY7866_RS19645;product=SPI-2 type III secretion system apparatus protein SsaQ;protein_id=WP_000944194.1;transl_table=11
NZ_CAAR01000599.1	RefSeq	gene	8763	9335	.	+	.	ID=gene-STY7866_RS19650;Name=STY7866_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19650
NZ_CAAR01000599.1	Protein Homology	CDS	8763	9335	.	+	0	ID=cds-WP_001765125.1;Parent=gene-STY7866_RS19650;Dbxref=Genbank:WP_001765125.1;Name=WP_001765125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006705799.1;locus_tag=STY7866_RS19650;product=EscR/YscR/HrcR family type III secretion system export apparatus protein;protein_id=WP_001765125.1;transl_table=11
NZ_CAAR01000599.1	RefSeq	gene	9332	9598	.	+	.	ID=gene-STY7866_RS19655;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=STY7866_RS19655
NZ_CAAR01000599.1	Protein Homology	CDS	9332	9598	.	+	0	ID=cds-WP_000999977.1;Parent=gene-STY7866_RS19655;Dbxref=Genbank:WP_000999977.1;Name=WP_000999977.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456108.1;locus_tag=STY7866_RS19655;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WP_000999977.1;transl_table=11
NZ_CAAR01000599.1	RefSeq	pseudogene	9599	10379	.	+	.	ID=gene-STY7866_RS19660;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=pseudogene;locus_tag=STY7866_RS19660;pseudo=true
NZ_CAAR01000599.1	Protein Homology	CDS	9599	10379	.	+	0	ID=cds-STY7866_RS19660;Parent=gene-STY7866_RS19660;Note=frameshifted;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456107.1;locus_tag=STY7866_RS19660;product=SPI-2 type III secretion system apparatus protein SsaT;pseudo=true;transl_table=11
NZ_CAAR01000599.1	RefSeq	pseudogene	10376	10625	.	+	.	ID=gene-STY7866_RS27765;Name=STY7866_RS27765;end_range=10625,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27765;partial=true;pseudo=true
NZ_CAAR01000599.1	Protein Homology	CDS	10376	10625	.	+	0	ID=cds-STY7866_RS27765;Parent=gene-STY7866_RS27765;Note=member of a type III secretion system which is part of a pathogenicity island in Salmonella%2C Yersinia and pathogenic Escherichia coli%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=10625,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456106.1;locus_tag=STY7866_RS27765;partial=true;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000598.1 1 11067
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000598.1	RefSeq	region	1	11067	.	+	.	ID=NZ_CAAR01000598.1:1..11067;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000598.1	RefSeq	pseudogene	1	937	.	+	.	ID=gene-STY7866_RS19540;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=pseudogene;gene_synonym=aarF,yigQ,yigR;locus_tag=STY7866_RS19540;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000598.1	Protein Homology	CDS	1	937	.	+	1	ID=cds-STY7866_RS19540;Parent=gene-STY7866_RS19540;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=ubiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457779.1;locus_tag=STY7866_RS19540;partial=true;product=ubiquinone biosynthesis regulatory protein kinase UbiB;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000598.1	RefSeq	gene	1143	1397	.	+	.	ID=gene-STY7866_RS19545;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=STY7866_RS19545
NZ_CAAR01000598.1	Protein Homology	CDS	1143	1397	.	+	0	ID=cds-WP_000508972.1;Parent=gene-STY7866_RS19545;Dbxref=Genbank:WP_000508972.1;Name=WP_000508972.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457778.1;locus_tag=STY7866_RS19545;product=Sec-independent protein translocase subunit TatA;protein_id=WP_000508972.1;transl_table=11
NZ_CAAR01000598.1	RefSeq	gene	1401	1949	.	+	.	ID=gene-STY7866_RS19550;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=STY7866_RS19550
NZ_CAAR01000598.1	Protein Homology	CDS	1401	1949	.	+	0	ID=cds-WP_000459611.1;Parent=gene-STY7866_RS19550;Dbxref=Genbank:WP_000459611.1;Name=WP_000459611.1;gbkey=CDS;gene=tatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457777.1;locus_tag=STY7866_RS19550;product=Sec-independent protein translocase subunit TatB;protein_id=WP_000459611.1;transl_table=11
NZ_CAAR01000598.1	RefSeq	pseudogene	1952	2729	.	+	.	ID=gene-STY7866_RS19555;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=pseudogene;locus_tag=STY7866_RS19555;pseudo=true
NZ_CAAR01000598.1	Protein Homology	CDS	1952	2729	.	+	0	ID=cds-STY7866_RS19555;Parent=gene-STY7866_RS19555;Note=frameshifted;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457776.1;locus_tag=STY7866_RS19555;product=Sec-independent protein translocase subunit TatC;pseudo=true;transl_table=11
NZ_CAAR01000598.1	RefSeq	gene	2771	3553	.	+	.	ID=gene-STY7866_RS19560;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=STY7866_RS19560
NZ_CAAR01000598.1	Protein Homology	CDS	2771	3553	.	+	0	ID=cds-WP_000459642.1;Parent=gene-STY7866_RS19560;Dbxref=Genbank:WP_000459642.1;Name=WP_000459642.1;gbkey=CDS;gene=tatD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457775.1;locus_tag=STY7866_RS19560;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_000459642.1;transl_table=11
NZ_CAAR01000598.1	RefSeq	gene	3561	4049	.	-	.	ID=gene-STY7866_RS19565;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=STY7866_RS19565
NZ_CAAR01000598.1	Protein Homology	CDS	3561	4049	.	-	0	ID=cds-WP_001192407.1;Parent=gene-STY7866_RS19565;Dbxref=Genbank:WP_001192407.1;Name=WP_001192407.1;gbkey=CDS;gene=rfaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457774.1;locus_tag=STY7866_RS19565;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192407.1;transl_table=11
NZ_CAAR01000598.1	RefSeq	gene	4235	5713	.	+	.	ID=gene-STY7866_RS19570;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=STY7866_RS19570
NZ_CAAR01000598.1	Protein Homology	CDS	4235	5713	.	+	0	ID=cds-WP_000339760.1;Parent=gene-STY7866_RS19570;Dbxref=Genbank:WP_000339760.1;Name=WP_000339760.1;gbkey=CDS;gene=ubiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457773.1;locus_tag=STY7866_RS19570;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339760.1;transl_table=11
NZ_CAAR01000598.1	RefSeq	gene	5799	6500	.	+	.	ID=gene-STY7866_RS19575;Name=STY7866_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19575
NZ_CAAR01000598.1	Protein Homology	CDS	5799	6500	.	+	0	ID=cds-WP_000209828.1;Parent=gene-STY7866_RS19575;Dbxref=Genbank:WP_000209828.1;Name=WP_000209828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457772.1;locus_tag=STY7866_RS19575;product=NAD(P)H-flavin reductase;protein_id=WP_000209828.1;transl_table=11
NZ_CAAR01000598.1	RefSeq	gene	6754	8577	.	+	.	ID=gene-STY7866_RS19580;Name=STY7866_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19580
NZ_CAAR01000598.1	Protein Homology	CDS	6754	8577	.	+	0	ID=cds-WP_000669894.1;Parent=gene-STY7866_RS19580;Dbxref=Genbank:WP_000669894.1;Name=WP_000669894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457771.1;locus_tag=STY7866_RS19580;product=aryl-sulfate sulfotransferase;protein_id=WP_000669894.1;transl_table=11
NZ_CAAR01000598.1	RefSeq	gene	8774	9937	.	-	.	ID=gene-STY7866_RS19585;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=STY7866_RS19585
NZ_CAAR01000598.1	Protein Homology	CDS	8774	9937	.	-	0	ID=cds-WP_000438778.1;Parent=gene-STY7866_RS19585;Dbxref=Genbank:WP_000438778.1;Name=WP_000438778.1;gbkey=CDS;gene=fadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457770.1;locus_tag=STY7866_RS19585;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438778.1;transl_table=11
NZ_CAAR01000598.1	RefSeq	pseudogene	9947	11067	.	-	.	ID=gene-STY7866_RS19590;Name=fadB;end_range=11067,.;gbkey=Gene;gene=fadB;gene_biotype=pseudogene;locus_tag=STY7866_RS19590;partial=true;pseudo=true
NZ_CAAR01000598.1	Protein Homology	CDS	9947	11067	.	-	2	ID=cds-STY7866_RS19590;Parent=gene-STY7866_RS19590;Note=includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=11067,.;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001490315.1;locus_tag=STY7866_RS19590;partial=true;product=fatty acid oxidation complex subunit alpha FadB;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000597.1 1 1099
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000597.1	RefSeq	region	1	1099	.	+	.	ID=NZ_CAAR01000597.1:1..1099;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000597.1	RefSeq	gene	1	545	.	-	.	ID=gene-STY7866_RS19530;Name=STY7866_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19530;partial=true;start_range=.,1
NZ_CAAR01000597.1	Protein Homology	CDS	1	545	.	-	0	ID=cds-WP_001765119.1;Parent=gene-STY7866_RS19530;Dbxref=Genbank:WP_001765119.1;Name=WP_001765119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=STY7866_RS19530;partial=true;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_001765119.1;start_range=.,1;transl_table=11
NZ_CAAR01000597.1	RefSeq	gene	575	1027	.	-	.	ID=gene-STY7866_RS19535;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=STY7866_RS19535
NZ_CAAR01000597.1	Protein Homology	CDS	575	1027	.	-	0	ID=cds-WP_000653696.1;Parent=gene-STY7866_RS19535;Dbxref=Genbank:WP_000653696.1;Name=WP_000653696.1;gbkey=CDS;gene=nudB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456467.1;locus_tag=STY7866_RS19535;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_000653696.1;transl_table=11
##sequence-region NZ_CAAR01000596.1 1 2620
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000596.1	RefSeq	region	1	2620	.	+	.	ID=NZ_CAAR01000596.1:1..2620;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000596.1	RefSeq	pseudogene	1	188	.	+	.	ID=gene-STY7866_RS19510;Name=STY7866_RS19510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19510;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000596.1	Protein Homology	CDS	1	188	.	+	2	ID=cds-STY7866_RS19510;Parent=gene-STY7866_RS19510;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=STY7866_RS19510;partial=true;product=YebC/PmpR family DNA-binding transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000596.1	RefSeq	gene	225	746	.	+	.	ID=gene-STY7866_RS19515;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=STY7866_RS19515
NZ_CAAR01000596.1	Protein Homology	CDS	225	746	.	+	0	ID=cds-WP_000022509.1;Parent=gene-STY7866_RS19515;Dbxref=Genbank:WP_000022509.1;Name=WP_000022509.1;gbkey=CDS;gene=ruvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=STY7866_RS19515;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_000022509.1;transl_table=11
NZ_CAAR01000596.1	RefSeq	gene	748	1347	.	-	.	ID=gene-STY7866_RS19520;Name=STY7866_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19520
NZ_CAAR01000596.1	Protein Homology	CDS	748	1347	.	-	0	ID=cds-WP_000716741.1;Parent=gene-STY7866_RS19520;Dbxref=Genbank:WP_000716741.1;Name=WP_000716741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456464.1;locus_tag=STY7866_RS19520;product=YebB family permuted papain-like enzyme;protein_id=WP_000716741.1;transl_table=11
NZ_CAAR01000596.1	RefSeq	gene	1575	2249	.	+	.	ID=gene-STY7866_RS19525;Name=STY7866_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19525
NZ_CAAR01000596.1	Protein Homology	CDS	1575	2249	.	+	0	ID=cds-WP_010989195.1;Parent=gene-STY7866_RS19525;Dbxref=Genbank:WP_010989195.1;Name=WP_010989195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456463.1;locus_tag=STY7866_RS19525;product=hypothetical protein;protein_id=WP_010989195.1;transl_table=11
NZ_CAAR01000596.1	RefSeq	pseudogene	2477	2620	.	+	.	ID=gene-STY7866_RS27760;Name=ruvA;end_range=2620,.;gbkey=Gene;gene=ruvA;gene_biotype=pseudogene;locus_tag=STY7866_RS27760;partial=true;pseudo=true
NZ_CAAR01000596.1	Protein Homology	CDS	2477	2620	.	+	0	ID=cds-STY7866_RS27760;Parent=gene-STY7866_RS27760;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2620,.;gbkey=CDS;gene=ruvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001637489.1;locus_tag=STY7866_RS27760;partial=true;product=Holliday junction branch migration protein RuvA;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000595.1 1 1900
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000595.1	RefSeq	region	1	1900	.	+	.	ID=NZ_CAAR01000595.1:1..1900;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000595.1	RefSeq	gene	310	735	.	+	.	ID=gene-STY7866_RS19495;Name=STY7866_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19495
NZ_CAAR01000595.1	Protein Homology	CDS	310	735	.	+	0	ID=cds-WP_000218564.1;Parent=gene-STY7866_RS19495;Dbxref=Genbank:WP_000218564.1;Name=WP_000218564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457470.1;locus_tag=STY7866_RS19495;product=DNA-binding protein;protein_id=WP_000218564.1;transl_table=11
NZ_CAAR01000595.1	RefSeq	gene	761	1339	.	+	.	ID=gene-STY7866_RS19500;Name=STY7866_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19500
NZ_CAAR01000595.1	Protein Homology	CDS	761	1339	.	+	0	ID=cds-WP_000124001.1;Parent=gene-STY7866_RS19500;Dbxref=Genbank:WP_000124001.1;Name=WP_000124001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457471.1;locus_tag=STY7866_RS19500;product=ECF transporter S component;protein_id=WP_000124001.1;transl_table=11
NZ_CAAR01000595.1	RefSeq	pseudogene	1340	1900	.	+	.	ID=gene-STY7866_RS19505;Name=STY7866_RS19505;end_range=1900,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19505;partial=true;pseudo=true
NZ_CAAR01000595.1	Protein Homology	CDS	1340	1900	.	+	0	ID=cds-STY7866_RS19505;Parent=gene-STY7866_RS19505;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=1900,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=STY7866_RS19505;partial=true;product=energy-coupling factor transporter transmembrane protein EcfT;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000594.1 1 2373
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000594.1	RefSeq	region	1	2373	.	+	.	ID=NZ_CAAR01000594.1:1..2373;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000594.1	RefSeq	pseudogene	1	685	.	-	.	ID=gene-STY7866_RS19480;Name=STY7866_RS19480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19480;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000594.1	Protein Homology	CDS	1	685	.	-	0	ID=cds-STY7866_RS19480;Parent=gene-STY7866_RS19480;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=STY7866_RS19480;partial=true;product=multidrug efflux RND transporter permease subunit;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000594.1	RefSeq	pseudogene	697	1122	.	-	.	ID=gene-STY7866_RS19485;Name=STY7866_RS19485;end_range=1122,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19485;partial=true;pseudo=true
NZ_CAAR01000594.1	Protein Homology	CDS	697	1122	.	-	0	ID=cds-STY7866_RS19485;Parent=gene-STY7866_RS19485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1122,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=STY7866_RS19485;partial=true;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11
NZ_CAAR01000594.1	RefSeq	pseudogene	1124	2373	.	-	.	ID=gene-STY7866_RS19490;Name=STY7866_RS19490;end_range=2373,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19490;partial=true;pseudo=true;start_range=.,1124
NZ_CAAR01000594.1	Protein Homology	CDS	1124	2373	.	-	2	ID=cds-STY7866_RS19490;Parent=gene-STY7866_RS19490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2373,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=STY7866_RS19490;partial=true;product=diguanylate cyclase;pseudo=true;start_range=.,1124;transl_table=11
##sequence-region NZ_CAAR01000593.1 1 3275
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000593.1	RefSeq	region	1	3275	.	+	.	ID=NZ_CAAR01000593.1:1..3275;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000593.1	RefSeq	gene	1	543	.	-	.	ID=gene-STY7866_RS19460;Name=STY7866_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19460;partial=true;start_range=.,1
NZ_CAAR01000593.1	Protein Homology	CDS	1	543	.	-	0	ID=cds-WP_000600611.1;Parent=gene-STY7866_RS19460;Dbxref=Genbank:WP_000600611.1;Name=WP_000600611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455880.1;locus_tag=STY7866_RS19460;partial=true;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_000600611.1;start_range=.,1;transl_table=11
NZ_CAAR01000593.1	RefSeq	gene	555	992	.	-	.	ID=gene-STY7866_RS19465;Name=STY7866_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19465
NZ_CAAR01000593.1	Protein Homology	CDS	555	992	.	-	0	ID=cds-WP_000606458.1;Parent=gene-STY7866_RS19465;Dbxref=Genbank:WP_000606458.1;Name=WP_000606458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455881.1;locus_tag=STY7866_RS19465;product=PTS sugar transporter subunit IIA;protein_id=WP_000606458.1;transl_table=11
NZ_CAAR01000593.1	RefSeq	gene	1124	1930	.	-	.	ID=gene-STY7866_RS19470;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=STY7866_RS19470
NZ_CAAR01000593.1	Protein Homology	CDS	1124	1930	.	-	0	ID=cds-WP_000118614.1;Parent=gene-STY7866_RS19470;Dbxref=Genbank:WP_000118614.1;Name=WP_000118614.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455882.1;locus_tag=STY7866_RS19470;product=BtpA family protein SgcQ;protein_id=WP_000118614.1;transl_table=11
NZ_CAAR01000593.1	RefSeq	gene	1944	3257	.	-	.	ID=gene-STY7866_RS19475;Name=STY7866_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19475
NZ_CAAR01000593.1	Protein Homology	CDS	1944	3257	.	-	0	ID=cds-WP_000460840.1;Parent=gene-STY7866_RS19475;Dbxref=Genbank:WP_000460840.1;Name=WP_000460840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455883.1;locus_tag=STY7866_RS19475;product=permease;protein_id=WP_000460840.1;transl_table=11
##sequence-region NZ_CAAR01000592.1 1 2070
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000592.1	RefSeq	region	1	2070	.	+	.	ID=NZ_CAAR01000592.1:1..2070;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000592.1	RefSeq	pseudogene	1	158	.	-	.	ID=gene-STY7866_RS19435;Name=STY7866_RS19435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19435;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000592.1	Protein Homology	CDS	1	158	.	-	0	ID=cds-STY7866_RS19435;Parent=gene-STY7866_RS19435;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458020.1;locus_tag=STY7866_RS19435;partial=true;product=cytoplasmic protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000592.1	RefSeq	gene	244	1173	.	-	.	ID=gene-STY7866_RS19440;Name=STY7866_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19440
NZ_CAAR01000592.1	Protein Homology	CDS	244	1173	.	-	0	ID=cds-WP_001162859.1;Parent=gene-STY7866_RS19440;Dbxref=Genbank:WP_001162859.1;Name=WP_001162859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458019.1;locus_tag=STY7866_RS19440;product=alpha/beta hydrolase;protein_id=WP_001162859.1;transl_table=11
NZ_CAAR01000592.1	RefSeq	gene	1372	1620	.	+	.	ID=gene-STY7866_RS19450;Name=STY7866_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19450
NZ_CAAR01000592.1	Protein Homology	CDS	1372	1620	.	+	0	ID=cds-WP_000062287.1;Parent=gene-STY7866_RS19450;Dbxref=Genbank:WP_000062287.1;Name=WP_000062287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458018.1;locus_tag=STY7866_RS19450;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_000062287.1;transl_table=11
NZ_CAAR01000592.1	RefSeq	gene	1620	1994	.	+	.	ID=gene-STY7866_RS19455;Name=STY7866_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19455
NZ_CAAR01000592.1	Protein Homology	CDS	1620	1994	.	+	0	ID=cds-WP_000238494.1;Parent=gene-STY7866_RS19455;Dbxref=Genbank:WP_000238494.1;Name=WP_000238494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458017.1;locus_tag=STY7866_RS19455;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_000238494.1;transl_table=11
##sequence-region NZ_CAAR01000591.1 1 2117
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000591.1	RefSeq	region	1	2117	.	+	.	ID=NZ_CAAR01000591.1:1..2117;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000591.1	RefSeq	pseudogene	7	2082	.	+	.	ID=gene-STY7866_RS19425;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=pseudogene;locus_tag=STY7866_RS19425;pseudo=true
NZ_CAAR01000591.1	Protein Homology	CDS	7	2082	.	+	0	ID=cds-STY7866_RS19425;Parent=gene-STY7866_RS19425;Note=internal stop;gbkey=CDS;gene=glgX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=STY7866_RS19425;product=glycogen debranching protein GlgX;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000590.1 1 405
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000590.1	RefSeq	region	1	405	.	+	.	ID=NZ_CAAR01000590.1:1..405;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000590.1	RefSeq	pseudogene	1	170	.	-	.	ID=gene-STY7866_RS19420;Name=STY7866_RS19420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19420;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000590.1	Protein Homology	CDS	1	170	.	-	0	ID=cds-STY7866_RS19420;Parent=gene-STY7866_RS19420;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455647.1;locus_tag=STY7866_RS19420;partial=true;product=secY/secA suppressor protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000589.1 1 5179
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000589.1	RefSeq	region	1	5179	.	+	.	ID=NZ_CAAR01000589.1:1..5179;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000589.1	RefSeq	pseudogene	1	715	.	-	.	ID=gene-STY7866_RS19395;Name=STY7866_RS19395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19395;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000589.1	Protein Homology	CDS	1	715	.	-	0	ID=cds-STY7866_RS19395;Parent=gene-STY7866_RS19395;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=STY7866_RS19395;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000589.1	RefSeq	pseudogene	849	1848	.	-	.	ID=gene-STY7866_RS19400;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=pseudogene;locus_tag=STY7866_RS19400;pseudo=true
NZ_CAAR01000589.1	Protein Homology	CDS	849	1848	.	-	0	ID=cds-STY7866_RS19400;Parent=gene-STY7866_RS19400;Note=frameshifted;gbkey=CDS;gene=mglB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456749.1;locus_tag=STY7866_RS19400;product=galactose/glucose ABC transporter substrate-binding protein MglB;pseudo=true;transl_table=11
NZ_CAAR01000589.1	RefSeq	gene	2347	3369	.	-	.	ID=gene-STY7866_RS19405;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=STY7866_RS19405
NZ_CAAR01000589.1	Protein Homology	CDS	2347	3369	.	-	0	ID=cds-WP_000628627.1;Parent=gene-STY7866_RS19405;Dbxref=Genbank:WP_000628627.1;Name=WP_000628627.1;gbkey=CDS;gene=galS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456750.1;locus_tag=STY7866_RS19405;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628627.1;transl_table=11
NZ_CAAR01000589.1	RefSeq	gene	3519	4661	.	-	.	ID=gene-STY7866_RS19410;Name=STY7866_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19410
NZ_CAAR01000589.1	Protein Homology	CDS	3519	4661	.	-	0	ID=cds-WP_001765111.1;Parent=gene-STY7866_RS19410;Dbxref=Genbank:WP_001765111.1;Name=WP_001765111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456751.1;locus_tag=STY7866_RS19410;product=DUF418 family protein;protein_id=WP_001765111.1;transl_table=11
NZ_CAAR01000589.1	RefSeq	gene	4676	5179	.	-	.	ID=gene-STY7866_RS19415;Name=folE;end_range=5179,.;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=STY7866_RS19415;partial=true
NZ_CAAR01000589.1	Protein Homology	CDS	4676	5179	.	-	0	ID=cds-WP_000309549.1;Parent=gene-STY7866_RS19415;Dbxref=Genbank:WP_000309549.1;Name=WP_000309549.1;end_range=5179,.;gbkey=CDS;gene=folE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456752.1;locus_tag=STY7866_RS19415;partial=true;product=GTP cyclohydrolase I FolE;protein_id=WP_000309549.1;transl_table=11
##sequence-region NZ_CAAR01000588.1 1 7017
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000588.1	RefSeq	region	1	7017	.	+	.	ID=NZ_CAAR01000588.1:1..7017;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000588.1	RefSeq	pseudogene	1	304	.	+	.	ID=gene-STY7866_RS19355;Name=STY7866_RS19355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19355;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000588.1	Protein Homology	CDS	1	304	.	+	1	ID=cds-STY7866_RS19355;Parent=gene-STY7866_RS19355;Note=septal ring component that protects the divisome from stress%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457565.1;locus_tag=STY7866_RS19355;partial=true;product=cell division protein FtsP;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000588.1	RefSeq	gene	625	1236	.	+	.	ID=gene-STY7866_RS19365;Name=STY7866_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19365
NZ_CAAR01000588.1	Protein Homology	CDS	625	1236	.	+	0	ID=cds-WP_000261099.1;Parent=gene-STY7866_RS19365;Dbxref=Genbank:WP_000261099.1;Name=WP_000261099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000261098.1;locus_tag=STY7866_RS19365;product=hypothetical protein;protein_id=WP_000261099.1;transl_table=11
NZ_CAAR01000588.1	RefSeq	gene	1420	1803	.	+	.	ID=gene-STY7866_RS19370;Name=STY7866_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19370
NZ_CAAR01000588.1	GeneMarkS-2+	CDS	1420	1803	.	+	0	ID=cds-WP_000504694.1;Parent=gene-STY7866_RS19370;Dbxref=Genbank:WP_000504694.1;Name=WP_000504694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=STY7866_RS19370;product=hypothetical protein;protein_id=WP_000504694.1;transl_table=11
NZ_CAAR01000588.1	RefSeq	gene	1882	2841	.	+	.	ID=gene-STY7866_RS19375;Name=STY7866_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19375
NZ_CAAR01000588.1	Protein Homology	CDS	1882	2841	.	+	0	ID=cds-WP_001765108.1;Parent=gene-STY7866_RS19375;Dbxref=Genbank:WP_001765108.1;Name=WP_001765108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001765108.1;locus_tag=STY7866_RS19375;product=hypothetical protein;protein_id=WP_001765108.1;transl_table=11
NZ_CAAR01000588.1	RefSeq	gene	2857	4281	.	+	.	ID=gene-STY7866_RS19380;Name=STY7866_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19380
NZ_CAAR01000588.1	Protein Homology	CDS	2857	4281	.	+	0	ID=cds-WP_000384560.1;Parent=gene-STY7866_RS19380;Dbxref=Genbank:WP_000384560.1;Name=WP_000384560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457562.1;locus_tag=STY7866_RS19380;product=hypothetical protein;protein_id=WP_000384560.1;transl_table=11
NZ_CAAR01000588.1	RefSeq	gene	4346	5767	.	+	.	ID=gene-STY7866_RS19385;Name=STY7866_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19385
NZ_CAAR01000588.1	Protein Homology	CDS	4346	5767	.	+	0	ID=cds-WP_000710520.1;Parent=gene-STY7866_RS19385;Dbxref=Genbank:WP_000710520.1;Name=WP_000710520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528005.1;locus_tag=STY7866_RS19385;product=DUF4459 domain-containing protein;protein_id=WP_000710520.1;transl_table=11
NZ_CAAR01000588.1	RefSeq	pseudogene	5904	7017	.	+	.	ID=gene-STY7866_RS19390;Name=STY7866_RS19390;end_range=7017,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19390;partial=true;pseudo=true
NZ_CAAR01000588.1	Protein Homology	CDS	5904	7017	.	+	0	ID=cds-STY7866_RS19390;Parent=gene-STY7866_RS19390;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7017,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457560.1;locus_tag=STY7866_RS19390;partial=true;product=YgiQ family radical SAM protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000587.1 1 2640
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000587.1	RefSeq	region	1	2640	.	+	.	ID=NZ_CAAR01000587.1:1..2640;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000587.1	RefSeq	gene	122	571	.	-	.	ID=gene-STY7866_RS19330;Name=STY7866_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19330
NZ_CAAR01000587.1	Protein Homology	CDS	122	571	.	-	0	ID=cds-WP_000798706.1;Parent=gene-STY7866_RS19330;Dbxref=Genbank:WP_000798706.1;Name=WP_000798706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455517.1;locus_tag=STY7866_RS19330;product=lipoprotein;protein_id=WP_000798706.1;transl_table=11
NZ_CAAR01000587.1	RefSeq	gene	788	1177	.	+	.	ID=gene-STY7866_RS19335;Name=STY7866_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19335
NZ_CAAR01000587.1	Protein Homology	CDS	788	1177	.	+	0	ID=cds-WP_001294876.1;Parent=gene-STY7866_RS19335;Dbxref=Genbank:WP_001294876.1;Name=WP_001294876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455518.1;locus_tag=STY7866_RS19335;product=membrane protein;protein_id=WP_001294876.1;transl_table=11
NZ_CAAR01000587.1	RefSeq	gene	1164	1445	.	+	.	ID=gene-STY7866_RS19340;Name=STY7866_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19340
NZ_CAAR01000587.1	Protein Homology	CDS	1164	1445	.	+	0	ID=cds-WP_000226307.1;Parent=gene-STY7866_RS19340;Dbxref=Genbank:WP_000226307.1;Name=WP_000226307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455519.1;locus_tag=STY7866_RS19340;product=phage holin family protein;protein_id=WP_000226307.1;transl_table=11
NZ_CAAR01000587.1	RefSeq	gene	1445	2059	.	+	.	ID=gene-STY7866_RS19345;Name=STY7866_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19345
NZ_CAAR01000587.1	Protein Homology	CDS	1445	2059	.	+	0	ID=cds-WP_001075998.1;Parent=gene-STY7866_RS19345;Dbxref=Genbank:WP_001075998.1;Name=WP_001075998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455520.1;locus_tag=STY7866_RS19345;product=glycoside hydrolase family 19 protein;protein_id=WP_001075998.1;transl_table=11
NZ_CAAR01000587.1	RefSeq	gene	2056	2595	.	+	.	ID=gene-STY7866_RS19350;Name=STY7866_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19350
NZ_CAAR01000587.1	Protein Homology	CDS	2056	2595	.	+	0	ID=cds-WP_001050879.1;Parent=gene-STY7866_RS19350;Dbxref=Genbank:WP_001050879.1;Name=WP_001050879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455521.1;locus_tag=STY7866_RS19350;product=DUF2514 domain-containing protein;protein_id=WP_001050879.1;transl_table=11
##sequence-region NZ_CAAR01000586.1 1 500
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000586.1	RefSeq	region	1	500	.	+	.	ID=NZ_CAAR01000586.1:1..500;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000586.1	RefSeq	pseudogene	1	500	.	+	.	ID=gene-STY7866_RS19325;Name=recC;end_range=500,.;gbkey=Gene;gene=recC;gene_biotype=pseudogene;locus_tag=STY7866_RS19325;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000586.1	Protein Homology	CDS	1	500	.	+	1	ID=cds-STY7866_RS19325;Parent=gene-STY7866_RS19325;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=500,.;gbkey=CDS;gene=recC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457389.1;locus_tag=STY7866_RS19325;partial=true;product=exonuclease V subunit gamma;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000585.1 1 1529
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000585.1	RefSeq	region	1	1529	.	+	.	ID=NZ_CAAR01000585.1:1..1529;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000585.1	RefSeq	gene	1	1117	.	+	.	ID=gene-STY7866_RS19315;Name=STY7866_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19315;partial=true;start_range=.,1
NZ_CAAR01000585.1	Protein Homology	CDS	1	1117	.	+	1	ID=cds-WP_000305868.1;Parent=gene-STY7866_RS19315;Dbxref=Genbank:WP_000305868.1;Name=WP_000305868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456089.1;locus_tag=STY7866_RS19315;partial=true;product=fusaric acid resistance protein;protein_id=WP_000305868.1;start_range=.,1;transl_table=11
NZ_CAAR01000585.1	RefSeq	gene	1093	1529	.	-	.	ID=gene-STY7866_RS19320;Name=sodC;end_range=1529,.;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=STY7866_RS19320;partial=true
NZ_CAAR01000585.1	Protein Homology	CDS	1093	1529	.	-	2	ID=cds-WP_000315605.1;Parent=gene-STY7866_RS19320;Dbxref=Genbank:WP_000315605.1;Name=WP_000315605.1;end_range=1529,.;gbkey=CDS;gene=sodC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456090.1;locus_tag=STY7866_RS19320;partial=true;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WP_000315605.1;transl_table=11
##sequence-region NZ_CAAR01000584.1 1 503
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000584.1	RefSeq	region	1	503	.	+	.	ID=NZ_CAAR01000584.1:1..503;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000584.1	RefSeq	pseudogene	8	503	.	-	.	ID=gene-STY7866_RS19310;Name=STY7866_RS19310;end_range=503,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19310;partial=true;pseudo=true;start_range=.,8
NZ_CAAR01000584.1	Protein Homology	CDS	8	503	.	-	1	ID=cds-STY7866_RS19310;Parent=gene-STY7866_RS19310;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=503,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533825.1;locus_tag=STY7866_RS19310;partial=true;product=DUF3102 domain-containing protein;pseudo=true;start_range=.,8;transl_table=11
##sequence-region NZ_CAAR01000583.1 1 2246
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000583.1	RefSeq	region	1	2246	.	+	.	ID=NZ_CAAR01000583.1:1..2246;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000583.1	RefSeq	gene	20	1195	.	+	.	ID=gene-STY7866_RS19295;Name=STY7866_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19295
NZ_CAAR01000583.1	Protein Homology	CDS	20	1195	.	+	0	ID=cds-WP_151260014.1;Parent=gene-STY7866_RS19295;Dbxref=Genbank:WP_151260014.1;Name=WP_151260014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664472.1;locus_tag=STY7866_RS19295;product=MFS transporter;protein_id=WP_151260014.1;transl_table=11
NZ_CAAR01000583.1	RefSeq	pseudogene	1192	1571	.	+	.	ID=gene-STY7866_RS19300;Name=STY7866_RS19300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19300;pseudo=true
NZ_CAAR01000583.1	Protein Homology	CDS	1192	1571	.	+	0	ID=cds-STY7866_RS19300;Parent=gene-STY7866_RS19300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=STY7866_RS19300;product=DUF4440 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000583.1	RefSeq	pseudogene	1627	2246	.	-	.	ID=gene-STY7866_RS19305;Name=STY7866_RS19305;end_range=2246,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19305;partial=true;pseudo=true
NZ_CAAR01000583.1	Protein Homology	CDS	1627	2246	.	-	2	ID=cds-STY7866_RS19305;Parent=gene-STY7866_RS19305;Note=This protein performs the mismatch recognition step during the DNA repair process%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2246,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457300.1;locus_tag=STY7866_RS19305;partial=true;product=DNA mismatch repair protein MutS;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000582.1 1 2175
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000582.1	RefSeq	region	1	2175	.	+	.	ID=NZ_CAAR01000582.1:1..2175;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000582.1	RefSeq	gene	1	995	.	+	.	ID=gene-STY7866_RS19280;Name=STY7866_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19280;partial=true;start_range=.,1
NZ_CAAR01000582.1	Protein Homology	CDS	1	995	.	+	2	ID=cds-WP_000407245.1;Parent=gene-STY7866_RS19280;Dbxref=Genbank:WP_000407245.1;Name=WP_000407245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454977.1;locus_tag=STY7866_RS19280;partial=true;product=MFS transporter;protein_id=WP_000407245.1;start_range=.,1;transl_table=11
NZ_CAAR01000582.1	RefSeq	gene	1286	1552	.	+	.	ID=gene-STY7866_RS19285;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=STY7866_RS19285
NZ_CAAR01000582.1	Protein Homology	CDS	1286	1552	.	+	0	ID=cds-WP_000245158.1;Parent=gene-STY7866_RS19285;Dbxref=Genbank:WP_000245158.1;Name=WP_000245158.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454978.1;locus_tag=STY7866_RS19285;product=anti-adapter protein IraP;protein_id=WP_000245158.1;transl_table=11
NZ_CAAR01000582.1	RefSeq	gene	1904	2175	.	+	.	ID=gene-STY7866_RS19290;Name=psiF;end_range=2175,.;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=STY7866_RS19290;partial=true
NZ_CAAR01000582.1	Protein Homology	CDS	1904	2175	.	+	0	ID=cds-WP_001765076.1;Parent=gene-STY7866_RS19290;Dbxref=Genbank:WP_001765076.1;Name=WP_001765076.1;end_range=2175,.;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454979.1;locus_tag=STY7866_RS19290;partial=true;product=phosphate starvation-inducible protein PsiF;protein_id=WP_001765076.1;transl_table=11
##sequence-region NZ_CAAR01000581.1 1 1595
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000581.1	RefSeq	region	1	1595	.	+	.	ID=NZ_CAAR01000581.1:1..1595;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000581.1	RefSeq	gene	1	721	.	+	.	ID=gene-STY7866_RS19270;Name=STY7866_RS19270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19270;partial=true;start_range=.,1
NZ_CAAR01000581.1	Protein Homology	CDS	1	721	.	+	1	ID=cds-WP_000112499.1;Parent=gene-STY7866_RS19270;Dbxref=Genbank:WP_000112499.1;Name=WP_000112499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=STY7866_RS19270;partial=true;product=type 1 fimbrial protein;protein_id=WP_000112499.1;start_range=.,1;transl_table=11
NZ_CAAR01000581.1	RefSeq	pseudogene	779	1595	.	-	.	ID=gene-STY7866_RS19275;Name=STY7866_RS19275;end_range=1595,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19275;partial=true;pseudo=true
NZ_CAAR01000581.1	Protein Homology	CDS	779	1595	.	-	1	ID=cds-STY7866_RS19275;Parent=gene-STY7866_RS19275;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1595,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458997.1;locus_tag=STY7866_RS19275;partial=true;product=cell envelope integrity protein CreD;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000580.1 1 1241
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000580.1	RefSeq	region	1	1241	.	+	.	ID=NZ_CAAR01000580.1:1..1241;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000580.1	RefSeq	pseudogene	1	545	.	+	.	ID=gene-STY7866_RS19260;Name=STY7866_RS19260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19260;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000580.1	Protein Homology	CDS	1	545	.	+	2	ID=cds-STY7866_RS19260;Parent=gene-STY7866_RS19260;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454775.1;locus_tag=STY7866_RS19260;partial=true;product=D-threonate kinase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000580.1	RefSeq	gene	535	1241	.	+	.	ID=gene-STY7866_RS19265;Name=STY7866_RS19265;end_range=1241,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19265;partial=true
NZ_CAAR01000580.1	Protein Homology	CDS	535	1241	.	+	0	ID=cds-WP_000448741.1;Parent=gene-STY7866_RS19265;Dbxref=Genbank:WP_000448741.1;Name=WP_000448741.1;end_range=1241,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454776.1;locus_tag=STY7866_RS19265;partial=true;product=hypothetical protein;protein_id=WP_000448741.1;transl_table=11
##sequence-region NZ_CAAR01000579.1 1 1405
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000579.1	RefSeq	region	1	1405	.	+	.	ID=NZ_CAAR01000579.1:1..1405;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000579.1	RefSeq	pseudogene	1	246	.	-	.	ID=gene-STY7866_RS19235;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=pseudogene;locus_tag=STY7866_RS19235;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000579.1	Protein Homology	CDS	1	246	.	-	0	ID=cds-STY7866_RS19235;Parent=gene-STY7866_RS19235;Note=physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulato%3B Hda supressor%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=ygfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457446.1;locus_tag=STY7866_RS19235;partial=true;product=tRNA-modifying protein YgfZ;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000579.1	RefSeq	gene	261	497	.	-	.	ID=gene-STY7866_RS19240;Name=STY7866_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19240
NZ_CAAR01000579.1	Protein Homology	CDS	261	497	.	-	0	ID=cds-WP_000465740.1;Parent=gene-STY7866_RS19240;Dbxref=Genbank:WP_000465740.1;Name=WP_000465740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001599080.1;locus_tag=STY7866_RS19240;product=hypothetical protein;protein_id=WP_000465740.1;transl_table=11
NZ_CAAR01000579.1	RefSeq	gene	496	762	.	+	.	ID=gene-STY7866_RS19245;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=STY7866_RS19245
NZ_CAAR01000579.1	Protein Homology	CDS	496	762	.	+	0	ID=cds-WP_000351186.1;Parent=gene-STY7866_RS19245;Dbxref=Genbank:WP_000351186.1;Name=WP_000351186.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=STY7866_RS19245;product=FAD assembly factor SdhE;protein_id=WP_000351186.1;transl_table=11
NZ_CAAR01000579.1	RefSeq	gene	743	1144	.	+	.	ID=gene-STY7866_RS19250;Name=STY7866_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19250
NZ_CAAR01000579.1	Protein Homology	CDS	743	1144	.	+	0	ID=cds-WP_000244762.1;Parent=gene-STY7866_RS19250;Dbxref=Genbank:WP_000244762.1;Name=WP_000244762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=STY7866_RS19250;product=membrane protein;protein_id=WP_000244762.1;transl_table=11
NZ_CAAR01000579.1	RefSeq	pseudogene	1209	1405	.	-	.	ID=gene-STY7866_RS19255;Name=STY7866_RS19255;end_range=1405,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19255;partial=true;pseudo=true
NZ_CAAR01000579.1	Protein Homology	CDS	1209	1405	.	-	2	ID=cds-STY7866_RS19255;Parent=gene-STY7866_RS19255;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1405,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457443.1;locus_tag=STY7866_RS19255;partial=true;product=flavodoxin FldB;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000578.1 1 1611
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000578.1	RefSeq	region	1	1611	.	+	.	ID=NZ_CAAR01000578.1:1..1611;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000578.1	RefSeq	gene	1	106	.	+	.	ID=gene-STY7866_RS27755;Name=STY7866_RS27755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27755;partial=true;start_range=.,1
NZ_CAAR01000578.1	Protein Homology	CDS	1	106	.	+	1	ID=cds-WP_001765057.1;Parent=gene-STY7866_RS27755;Dbxref=Genbank:WP_001765057.1;Name=WP_001765057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457803.1;locus_tag=STY7866_RS27755;partial=true;product=DUF484 family protein;protein_id=WP_001765057.1;start_range=.,1;transl_table=11
NZ_CAAR01000578.1	RefSeq	gene	103	1005	.	+	.	ID=gene-STY7866_RS19225;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=STY7866_RS19225
NZ_CAAR01000578.1	Protein Homology	CDS	103	1005	.	+	0	ID=cds-WP_000141123.1;Parent=gene-STY7866_RS19225;Dbxref=Genbank:WP_000141123.1;Name=WP_000141123.1;gbkey=CDS;gene=xerC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457802.1;locus_tag=STY7866_RS19225;product=tyrosine recombinase XerC;protein_id=WP_000141123.1;transl_table=11
NZ_CAAR01000578.1	RefSeq	pseudogene	1005	1611	.	+	.	ID=gene-STY7866_RS19230;Name=yigB;end_range=1611,.;gbkey=Gene;gene=yigB;gene_biotype=pseudogene;locus_tag=STY7866_RS19230;partial=true;pseudo=true
NZ_CAAR01000578.1	Protein Homology	CDS	1005	1611	.	+	0	ID=cds-STY7866_RS19230;Parent=gene-STY7866_RS19230;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=1611,.;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457801.1;locus_tag=STY7866_RS19230;partial=true;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000577.1 1 1042
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000577.1	RefSeq	region	1	1042	.	+	.	ID=NZ_CAAR01000577.1:1..1042;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000577.1	RefSeq	gene	301	1042	.	+	.	ID=gene-STY7866_RS19215;Name=STY7866_RS19215;end_range=1042,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19215;partial=true
NZ_CAAR01000577.1	Protein Homology	CDS	301	1042	.	+	0	ID=cds-WP_000195707.1;Parent=gene-STY7866_RS19215;Dbxref=Genbank:WP_000195707.1;Name=WP_000195707.1;end_range=1042,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455390.1;locus_tag=STY7866_RS19215;partial=true;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_000195707.1;transl_table=11
##sequence-region NZ_CAAR01000576.1 1 2130
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000576.1	RefSeq	region	1	2130	.	+	.	ID=NZ_CAAR01000576.1:1..2130;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000576.1	RefSeq	gene	1	627	.	+	.	ID=gene-STY7866_RS19200;Name=STY7866_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19200;partial=true;start_range=.,1
NZ_CAAR01000576.1	Protein Homology	CDS	1	627	.	+	0	ID=cds-WP_000314399.1;Parent=gene-STY7866_RS19200;Dbxref=Genbank:WP_000314399.1;Name=WP_000314399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455799.1;locus_tag=STY7866_RS19200;partial=true;product=EAL domain-containing protein;protein_id=WP_000314399.1;start_range=.,1;transl_table=11
NZ_CAAR01000576.1	RefSeq	gene	643	1449	.	-	.	ID=gene-STY7866_RS19205;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=STY7866_RS19205
NZ_CAAR01000576.1	Protein Homology	CDS	643	1449	.	-	0	ID=cds-WP_000230463.1;Parent=gene-STY7866_RS19205;Dbxref=Genbank:WP_000230463.1;Name=WP_000230463.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455800.1;locus_tag=STY7866_RS19205;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000230463.1;transl_table=11
NZ_CAAR01000576.1	RefSeq	gene	1451	2130	.	-	.	ID=gene-STY7866_RS19210;Name=sapD;end_range=2130,.;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=STY7866_RS19210;partial=true
NZ_CAAR01000576.1	Protein Homology	CDS	1451	2130	.	-	2	ID=cds-WP_000364022.1;Parent=gene-STY7866_RS19210;Dbxref=Genbank:WP_000364022.1;Name=WP_000364022.1;end_range=2130,.;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455801.1;locus_tag=STY7866_RS19210;partial=true;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_000364022.1;transl_table=11
##sequence-region NZ_CAAR01000575.1 1 936
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000575.1	RefSeq	region	1	936	.	+	.	ID=NZ_CAAR01000575.1:1..936;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000575.1	RefSeq	gene	1	936	.	-	.	ID=gene-STY7866_RS19195;Name=STY7866_RS19195;end_range=936,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19195;partial=true;start_range=.,1
NZ_CAAR01000575.1	Protein Homology	CDS	1	936	.	-	2	ID=cds-WP_000313238.1;Parent=gene-STY7866_RS19195;Dbxref=Genbank:WP_000313238.1;Name=WP_000313238.1;end_range=936,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457213.1;locus_tag=STY7866_RS19195;partial=true;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_000313238.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000574.1 1 884
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000574.1	RefSeq	region	1	884	.	+	.	ID=NZ_CAAR01000574.1:1..884;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000574.1	RefSeq	pseudogene	1	884	.	-	.	ID=gene-STY7866_RS19190;Name=STY7866_RS19190;end_range=884,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19190;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000574.1	Protein Homology	CDS	1	884	.	-	2	ID=cds-STY7866_RS19190;Parent=gene-STY7866_RS19190;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=884,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456036.1;locus_tag=STY7866_RS19190;partial=true;product=phage tail sheath family protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000573.1 1 1194
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000573.1	RefSeq	region	1	1194	.	+	.	ID=NZ_CAAR01000573.1:1..1194;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000573.1	RefSeq	gene	1	76	.	-	.	ID=gene-STY7866_RS27750;Name=STY7866_RS27750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27750;partial=true;start_range=.,1
NZ_CAAR01000573.1	Protein Homology	CDS	1	76	.	-	0	ID=cds-WP_151260013.1;Parent=gene-STY7866_RS27750;Dbxref=Genbank:WP_151260013.1;Name=WP_151260013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455842.1;locus_tag=STY7866_RS27750;partial=true;product=DUF2534 family protein;protein_id=WP_151260013.1;start_range=.,1;transl_table=11
NZ_CAAR01000573.1	RefSeq	gene	315	1194	.	+	.	ID=gene-STY7866_RS19185;Name=STY7866_RS19185;end_range=1194,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19185;partial=true
NZ_CAAR01000573.1	Protein Homology	CDS	315	1194	.	+	0	ID=cds-WP_000493668.1;Parent=gene-STY7866_RS19185;Dbxref=Genbank:WP_000493668.1;Name=WP_000493668.1;end_range=1194,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455841.1;locus_tag=STY7866_RS19185;partial=true;product=mechanosensitive ion channel family protein;protein_id=WP_000493668.1;transl_table=11
##sequence-region NZ_CAAR01000572.1 1 111
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000572.1	RefSeq	region	1	111	.	+	.	ID=NZ_CAAR01000572.1:1..111;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000571.1 1 5976
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000571.1	RefSeq	region	1	5976	.	+	.	ID=NZ_CAAR01000571.1:1..5976;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000571.1	RefSeq	gene	1	825	.	-	.	ID=gene-STY7866_RS19150;Name=STY7866_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19150;partial=true;start_range=.,1
NZ_CAAR01000571.1	Protein Homology	CDS	1	825	.	-	0	ID=cds-WP_000528895.1;Parent=gene-STY7866_RS19150;Dbxref=Genbank:WP_000528895.1;Name=WP_000528895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454926.1;locus_tag=STY7866_RS19150;partial=true;product=RNA ligase RtcB family protein;protein_id=WP_000528895.1;start_range=.,1;transl_table=11
NZ_CAAR01000571.1	RefSeq	gene	1044	2099	.	-	.	ID=gene-STY7866_RS19155;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=STY7866_RS19155
NZ_CAAR01000571.1	Protein Homology	CDS	1044	2099	.	-	0	ID=cds-WP_001226198.1;Parent=gene-STY7866_RS19155;Dbxref=Genbank:WP_001226198.1;Name=WP_001226198.1;gbkey=CDS;gene=dinB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454925.1;locus_tag=STY7866_RS19155;product=DNA polymerase IV;protein_id=WP_001226198.1;transl_table=11
NZ_CAAR01000571.1	RefSeq	gene	2349	3089	.	+	.	ID=gene-STY7866_RS19160;Name=STY7866_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19160
NZ_CAAR01000571.1	Protein Homology	CDS	2349	3089	.	+	0	ID=cds-WP_001225658.1;Parent=gene-STY7866_RS19160;Dbxref=Genbank:WP_001225658.1;Name=WP_001225658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454924.1;locus_tag=STY7866_RS19160;product=murein L%2CD-transpeptidase;protein_id=WP_001225658.1;transl_table=11
NZ_CAAR01000571.1	RefSeq	gene	3060	3827	.	-	.	ID=gene-STY7866_RS19165;Name=STY7866_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19165
NZ_CAAR01000571.1	Protein Homology	CDS	3060	3827	.	-	0	ID=cds-WP_000333360.1;Parent=gene-STY7866_RS19165;Dbxref=Genbank:WP_000333360.1;Name=WP_000333360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454923.1;locus_tag=STY7866_RS19165;product=class II glutamine amidotransferase;protein_id=WP_000333360.1;transl_table=11
NZ_CAAR01000571.1	RefSeq	gene	3991	4569	.	-	.	ID=gene-STY7866_RS19170;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=STY7866_RS19170
NZ_CAAR01000571.1	Protein Homology	CDS	3991	4569	.	-	0	ID=cds-WP_000284051.1;Parent=gene-STY7866_RS19170;Dbxref=Genbank:WP_000284051.1;Name=WP_000284051.1;gbkey=CDS;gene=lpcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458774.1;locus_tag=STY7866_RS19170;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284051.1;transl_table=11
NZ_CAAR01000571.1	RefSeq	gene	4809	5976	.	+	.	ID=gene-STY7866_RS19175;Name=STY7866_RS19175;end_range=5976,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19175;partial=true
NZ_CAAR01000571.1	Protein Homology	CDS	4809	5976	.	+	0	ID=cds-WP_000973039.1;Parent=gene-STY7866_RS19175;Dbxref=Genbank:WP_000973039.1;Name=WP_000973039.1;end_range=5976,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=STY7866_RS19175;partial=true;product=acyl-CoA dehydrogenase;protein_id=WP_000973039.1;transl_table=11
##sequence-region NZ_CAAR01000570.1 1 3223
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000570.1	RefSeq	region	1	3223	.	+	.	ID=NZ_CAAR01000570.1:1..3223;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000570.1	RefSeq	gene	39	812	.	+	.	ID=gene-STY7866_RS19130;Name=STY7866_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19130
NZ_CAAR01000570.1	Protein Homology	CDS	39	812	.	+	0	ID=cds-WP_151260012.1;Parent=gene-STY7866_RS19130;Dbxref=Genbank:WP_151260012.1;Name=WP_151260012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001726482.1;locus_tag=STY7866_RS19130;product=DUF2167 domain-containing protein;protein_id=WP_151260012.1;transl_table=11
NZ_CAAR01000570.1	RefSeq	gene	1035	2051	.	+	.	ID=gene-STY7866_RS19135;Name=STY7866_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19135
NZ_CAAR01000570.1	Protein Homology	CDS	1035	2051	.	+	0	ID=cds-WP_001265456.1;Parent=gene-STY7866_RS19135;Dbxref=Genbank:WP_001265456.1;Name=WP_001265456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455318.1;locus_tag=STY7866_RS19135;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265456.1;transl_table=11
NZ_CAAR01000570.1	RefSeq	gene	2062	3108	.	+	.	ID=gene-STY7866_RS19140;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=STY7866_RS19140
NZ_CAAR01000570.1	Protein Homology	CDS	2062	3108	.	+	0	ID=cds-WP_000187468.1;Parent=gene-STY7866_RS19140;Dbxref=Genbank:WP_000187468.1;Name=WP_000187468.1;gbkey=CDS;gene=galT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455317.1;locus_tag=STY7866_RS19140;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000187468.1;transl_table=11
NZ_CAAR01000570.1	RefSeq	gene	3111	3223	.	+	.	ID=gene-STY7866_RS27740;Name=STY7866_RS27740;end_range=3223,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27740;partial=true
NZ_CAAR01000570.1	Protein Homology	CDS	3111	3223	.	+	0	ID=cds-WP_001765022.1;Parent=gene-STY7866_RS27740;Dbxref=Genbank:WP_001765022.1;Name=WP_001765022.1;end_range=3223,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455316.1;locus_tag=STY7866_RS27740;partial=true;product=galactokinase;protein_id=WP_001765022.1;transl_table=11
##sequence-region NZ_CAAR01000569.1 1 1713
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000569.1	RefSeq	region	1	1713	.	+	.	ID=NZ_CAAR01000569.1:1..1713;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000569.1	RefSeq	pseudogene	13	264	.	+	.	ID=gene-STY7866_RS19120;Name=STY7866_RS19120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19120;partial=true;pseudo=true;start_range=.,13
NZ_CAAR01000569.1	Protein Homology	CDS	13	264	.	+	0	ID=cds-STY7866_RS19120;Parent=gene-STY7866_RS19120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458616.1;locus_tag=STY7866_RS19120;partial=true;product=ParA family protein;pseudo=true;start_range=.,13;transl_table=11
NZ_CAAR01000569.1	RefSeq	gene	261	1625	.	+	.	ID=gene-STY7866_RS19125;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=STY7866_RS19125
NZ_CAAR01000569.1	Protein Homology	CDS	261	1625	.	+	0	ID=cds-WP_000018526.1;Parent=gene-STY7866_RS19125;Dbxref=Genbank:WP_000018526.1;Name=WP_000018526.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458617.1;locus_tag=STY7866_RS19125;product=replicative DNA helicase;protein_id=WP_000018526.1;transl_table=11
##sequence-region NZ_CAAR01000568.1 1 1298
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000568.1	RefSeq	region	1	1298	.	+	.	ID=NZ_CAAR01000568.1:1..1298;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000568.1	RefSeq	gene	1	360	.	+	.	ID=gene-STY7866_RS19110;Name=STY7866_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19110;partial=true;start_range=.,1
NZ_CAAR01000568.1	Protein Homology	CDS	1	360	.	+	0	ID=cds-WP_000311684.1;Parent=gene-STY7866_RS19110;Dbxref=Genbank:WP_000311684.1;Name=WP_000311684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457449.1;locus_tag=STY7866_RS19110;partial=true;product=family 1 glycosylhydrolase;protein_id=WP_000311684.1;start_range=.,1;transl_table=11
NZ_CAAR01000568.1	RefSeq	gene	408	1247	.	-	.	ID=gene-STY7866_RS19115;Name=STY7866_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19115
NZ_CAAR01000568.1	Protein Homology	CDS	408	1247	.	-	0	ID=cds-WP_010989232.1;Parent=gene-STY7866_RS19115;Dbxref=Genbank:WP_010989232.1;Name=WP_010989232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457450.1;locus_tag=STY7866_RS19115;product=transporter;protein_id=WP_010989232.1;transl_table=11
##sequence-region NZ_CAAR01000567.1 1 2215
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000567.1	RefSeq	region	1	2215	.	+	.	ID=NZ_CAAR01000567.1:1..2215;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000567.1	RefSeq	gene	1	821	.	+	.	ID=gene-STY7866_RS19090;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=STY7866_RS19090;partial=true;start_range=.,1
NZ_CAAR01000567.1	Protein Homology	CDS	1	821	.	+	2	ID=cds-WP_000313073.1;Parent=gene-STY7866_RS19090;Dbxref=Genbank:WP_000313073.1;Name=WP_000313073.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456106.1;locus_tag=STY7866_RS19090;partial=true;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WP_000313073.1;start_range=.,1;transl_table=11
NZ_CAAR01000567.1	RefSeq	gene	979	1055	.	-	.	ID=gene-STY7866_RS19095;Name=STY7866_RS19095;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS19095
NZ_CAAR01000567.1	tRNAscan-SE	tRNA	979	1055	.	-	.	ID=rna-STY7866_RS19095;Parent=gene-STY7866_RS19095;anticodon=(pos:complement(1019..1021));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS19095;product=tRNA-Val
NZ_CAAR01000567.1	tRNAscan-SE	exon	979	1055	.	-	.	ID=exon-STY7866_RS19095-1;Parent=rna-STY7866_RS19095;anticodon=(pos:complement(1019..1021));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS19095;product=tRNA-Val
NZ_CAAR01000567.1	RefSeq	gene	1066	1142	.	-	.	ID=gene-STY7866_RS19100;Name=STY7866_RS19100;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS19100
NZ_CAAR01000567.1	tRNAscan-SE	tRNA	1066	1142	.	-	.	ID=rna-STY7866_RS19100;Parent=gene-STY7866_RS19100;anticodon=(pos:complement(1106..1108));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS19100;product=tRNA-Val
NZ_CAAR01000567.1	tRNAscan-SE	exon	1066	1142	.	-	.	ID=exon-STY7866_RS19100-1;Parent=rna-STY7866_RS19100;anticodon=(pos:complement(1106..1108));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS19100;product=tRNA-Val
NZ_CAAR01000567.1	RefSeq	gene	1294	2215	.	-	.	ID=gene-STY7866_RS19105;Name=mdtK;end_range=2215,.;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=STY7866_RS19105;partial=true
NZ_CAAR01000567.1	Protein Homology	CDS	1294	2215	.	-	1	ID=cds-WP_000341443.1;Parent=gene-STY7866_RS19105;Dbxref=Genbank:WP_000341443.1;Name=WP_000341443.1;end_range=2215,.;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456105.1;locus_tag=STY7866_RS19105;partial=true;product=multidrug efflux MATE transporter MdtK;protein_id=WP_000341443.1;transl_table=11
##sequence-region NZ_CAAR01000566.1 1 2068
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000566.1	RefSeq	region	1	2068	.	+	.	ID=NZ_CAAR01000566.1:1..2068;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000566.1	RefSeq	gene	1	692	.	-	.	ID=gene-STY7866_RS19070;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=STY7866_RS19070;partial=true;start_range=.,1
NZ_CAAR01000566.1	Protein Homology	CDS	1	692	.	-	0	ID=cds-WP_001764985.1;Parent=gene-STY7866_RS19070;Dbxref=Genbank:WP_001764985.1;Name=WP_001764985.1;gbkey=CDS;gene=eutR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456989.1;locus_tag=STY7866_RS19070;partial=true;product=HTH-type transcriptional regulator EutR;protein_id=WP_001764985.1;start_range=.,1;transl_table=11
NZ_CAAR01000566.1	RefSeq	gene	740	1234	.	-	.	ID=gene-STY7866_RS19075;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=STY7866_RS19075
NZ_CAAR01000566.1	Protein Homology	CDS	740	1234	.	-	0	ID=cds-WP_000606260.1;Parent=gene-STY7866_RS19075;Dbxref=Genbank:WP_000606260.1;Name=WP_000606260.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456990.1;locus_tag=STY7866_RS19075;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606260.1;transl_table=11
NZ_CAAR01000566.1	RefSeq	gene	1247	1906	.	-	.	ID=gene-STY7866_RS19080;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=STY7866_RS19080
NZ_CAAR01000566.1	Protein Homology	CDS	1247	1906	.	-	0	ID=cds-WP_001111056.1;Parent=gene-STY7866_RS19080;Dbxref=Genbank:WP_001111056.1;Name=WP_001111056.1;gbkey=CDS;gene=eutL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456991.1;locus_tag=STY7866_RS19080;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111056.1;transl_table=11
NZ_CAAR01000566.1	RefSeq	pseudogene	1916	2068	.	-	.	ID=gene-STY7866_RS19085;Name=STY7866_RS19085;end_range=2068,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19085;partial=true;pseudo=true
NZ_CAAR01000566.1	Protein Homology	CDS	1916	2068	.	-	0	ID=cds-STY7866_RS19085;Parent=gene-STY7866_RS19085;Note=catalyzes the formation of acetaldehyde from ethanolamine%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2068,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456992.1;locus_tag=STY7866_RS19085;partial=true;product=ethanolamine ammonia lyase small subunit;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000565.1 1 1928
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000565.1	RefSeq	region	1	1928	.	+	.	ID=NZ_CAAR01000565.1:1..1928;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000565.1	RefSeq	pseudogene	1	100	.	-	.	ID=gene-STY7866_RS27735;Name=STY7866_RS27735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27735;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000565.1	Protein Homology	CDS	1	100	.	-	0	ID=cds-STY7866_RS27735;Parent=gene-STY7866_RS27735;Note=secM translational pause allows for the initiation of secA translation%3B frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124640.1;locus_tag=STY7866_RS27735;partial=true;product=SecA regulator SecM;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000565.1	RefSeq	gene	382	1299	.	-	.	ID=gene-STY7866_RS19060;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=STY7866_RS19060
NZ_CAAR01000565.1	Protein Homology	CDS	382	1299	.	-	0	ID=cds-WP_000595474.1;Parent=gene-STY7866_RS19060;Dbxref=Genbank:WP_000595474.1;Name=WP_000595474.1;gbkey=CDS;gene=lpxC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595491.1;locus_tag=STY7866_RS19060;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595474.1;transl_table=11
NZ_CAAR01000565.1	RefSeq	pseudogene	1400	1928	.	-	.	ID=gene-STY7866_RS19065;Name=STY7866_RS19065;end_range=1928,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19065;partial=true;pseudo=true
NZ_CAAR01000565.1	Protein Homology	CDS	1400	1928	.	-	1	ID=cds-STY7866_RS19065;Parent=gene-STY7866_RS19065;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1928,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=STY7866_RS19065;partial=true;product=cell division protein FtsZ;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000564.1 1 3657
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000564.1	RefSeq	region	1	3657	.	+	.	ID=NZ_CAAR01000564.1:1..3657;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000564.1	RefSeq	gene	1	355	.	-	.	ID=gene-STY7866_RS19020;Name=STY7866_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19020;partial=true;start_range=.,1
NZ_CAAR01000564.1	Protein Homology	CDS	1	355	.	-	0	ID=cds-WP_149028498.1;Parent=gene-STY7866_RS19020;Dbxref=Genbank:WP_149028498.1;Name=WP_149028498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455500.1;locus_tag=STY7866_RS19020;partial=true;product=hypothetical protein;protein_id=WP_149028498.1;start_range=.,1;transl_table=11
NZ_CAAR01000564.1	RefSeq	gene	321	557	.	-	.	ID=gene-STY7866_RS27730;Name=STY7866_RS27730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27730
NZ_CAAR01000564.1	Protein Homology	CDS	321	557	.	-	0	ID=cds-WP_000869365.1;Parent=gene-STY7866_RS27730;Dbxref=Genbank:WP_000869365.1;Name=WP_000869365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000869364.1;locus_tag=STY7866_RS27730;product=Cro/Cl family transcriptional regulator;protein_id=WP_000869365.1;transl_table=11
NZ_CAAR01000564.1	RefSeq	gene	687	1091	.	+	.	ID=gene-STY7866_RS19030;Name=STY7866_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19030
NZ_CAAR01000564.1	Protein Homology	CDS	687	1091	.	+	0	ID=cds-WP_001009036.1;Parent=gene-STY7866_RS19030;Dbxref=Genbank:WP_001009036.1;Name=WP_001009036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455499.1;locus_tag=STY7866_RS19030;product=transcriptional regulator;protein_id=WP_001009036.1;transl_table=11
NZ_CAAR01000564.1	RefSeq	gene	1380	1580	.	+	.	ID=gene-STY7866_RS19035;Name=STY7866_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19035
NZ_CAAR01000564.1	Protein Homology	CDS	1380	1580	.	+	0	ID=cds-WP_000186242.1;Parent=gene-STY7866_RS19035;Dbxref=Genbank:WP_000186242.1;Name=WP_000186242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455498.1;locus_tag=STY7866_RS19035;product=cell division protein FtsZ;protein_id=WP_000186242.1;transl_table=11
NZ_CAAR01000564.1	RefSeq	gene	1671	1967	.	+	.	ID=gene-STY7866_RS19040;Name=STY7866_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19040
NZ_CAAR01000564.1	Protein Homology	CDS	1671	1967	.	+	0	ID=cds-WP_000995349.1;Parent=gene-STY7866_RS19040;Dbxref=Genbank:WP_000995349.1;Name=WP_000995349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455497.1;locus_tag=STY7866_RS19040;product=host-nuclease inhibitor protein Gam;protein_id=WP_000995349.1;transl_table=11
NZ_CAAR01000564.1	RefSeq	gene	1973	2758	.	+	.	ID=gene-STY7866_RS19045;Name=bet;gbkey=Gene;gene=bet;gene_biotype=protein_coding;locus_tag=STY7866_RS19045
NZ_CAAR01000564.1	Protein Homology	CDS	1973	2758	.	+	0	ID=cds-WP_001764962.1;Parent=gene-STY7866_RS19045;Dbxref=Genbank:WP_001764962.1;Name=WP_001764962.1;gbkey=CDS;gene=bet;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455496.1;locus_tag=STY7866_RS19045;product=phage recombination protein Bet;protein_id=WP_001764962.1;transl_table=11
NZ_CAAR01000564.1	RefSeq	gene	2755	3435	.	+	.	ID=gene-STY7866_RS19050;Name=STY7866_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19050
NZ_CAAR01000564.1	Protein Homology	CDS	2755	3435	.	+	0	ID=cds-WP_000187053.1;Parent=gene-STY7866_RS19050;Dbxref=Genbank:WP_000187053.1;Name=WP_000187053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455495.1;locus_tag=STY7866_RS19050;product=YqaJ viral recombinase family protein;protein_id=WP_000187053.1;transl_table=11
##sequence-region NZ_CAAR01000563.1 1 1060
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000563.1	RefSeq	region	1	1060	.	+	.	ID=NZ_CAAR01000563.1:1..1060;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000563.1	RefSeq	gene	1	257	.	+	.	ID=gene-STY7866_RS19010;Name=STY7866_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS19010;partial=true;start_range=.,1
NZ_CAAR01000563.1	Protein Homology	CDS	1	257	.	+	2	ID=cds-WP_000696466.1;Parent=gene-STY7866_RS19010;Dbxref=Genbank:WP_000696466.1;Name=WP_000696466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457603.1;locus_tag=STY7866_RS19010;partial=true;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000696466.1;start_range=.,1;transl_table=11
NZ_CAAR01000563.1	RefSeq	gene	381	1060	.	-	.	ID=gene-STY7866_RS19015;Name=rpoD;end_range=1060,.;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=STY7866_RS19015;partial=true
NZ_CAAR01000563.1	Protein Homology	CDS	381	1060	.	-	2	ID=cds-WP_000311009.1;Parent=gene-STY7866_RS19015;Dbxref=Genbank:WP_000311009.1;Name=WP_000311009.1;end_range=1060,.;gbkey=CDS;gene=rpoD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131403.1;locus_tag=STY7866_RS19015;partial=true;product=RNA polymerase sigma factor RpoD;protein_id=WP_000311009.1;transl_table=11
##sequence-region NZ_CAAR01000562.1 1 789
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000562.1	RefSeq	region	1	789	.	+	.	ID=NZ_CAAR01000562.1:1..789;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000562.1	RefSeq	pseudogene	1	556	.	+	.	ID=gene-STY7866_RS19000;Name=STY7866_RS19000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS19000;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000562.1	Protein Homology	CDS	1	556	.	+	1	ID=cds-STY7866_RS19000;Parent=gene-STY7866_RS19000;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455061.1;locus_tag=STY7866_RS19000;partial=true;product=ammonium transporter;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000562.1	RefSeq	pseudogene	656	789	.	-	.	ID=gene-STY7866_RS27725;Name=STY7866_RS27725;end_range=789,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27725;partial=true;pseudo=true
NZ_CAAR01000562.1	Protein Homology	CDS	656	789	.	-	2	ID=cds-STY7866_RS27725;Parent=gene-STY7866_RS27725;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=789,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455062.1;locus_tag=STY7866_RS27725;partial=true;product=acyl-CoA thioesterase II;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000561.1 1 2274
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000561.1	RefSeq	region	1	2274	.	+	.	ID=NZ_CAAR01000561.1:1..2274;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000561.1	RefSeq	pseudogene	69	923	.	-	.	ID=gene-STY7866_RS18985;Name=STY7866_RS18985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18985;pseudo=true
NZ_CAAR01000561.1	Protein Homology	CDS	69	923	.	-	0	ID=cds-STY7866_RS18985;Parent=gene-STY7866_RS18985;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=STY7866_RS18985;product=DNA/RNA non-specific endonuclease;pseudo=true;transl_table=11
NZ_CAAR01000561.1	RefSeq	gene	920	1234	.	-	.	ID=gene-STY7866_RS18990;Name=STY7866_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18990
NZ_CAAR01000561.1	Protein Homology	CDS	920	1234	.	-	0	ID=cds-WP_000916613.1;Parent=gene-STY7866_RS18990;Dbxref=Genbank:WP_000916613.1;Name=WP_000916613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=STY7866_RS18990;product=hypothetical protein;protein_id=WP_000916613.1;transl_table=11
NZ_CAAR01000561.1	RefSeq	gene	1377	2274	.	+	.	ID=gene-STY7866_RS18995;Name=STY7866_RS18995;end_range=2274,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18995;partial=true
NZ_CAAR01000561.1	Protein Homology	CDS	1377	2274	.	+	0	ID=cds-WP_001764931.1;Parent=gene-STY7866_RS18995;Dbxref=Genbank:WP_001764931.1;Name=WP_001764931.1;end_range=2274,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456183.1;locus_tag=STY7866_RS18995;partial=true;product=lipid A deacylase LpxR family protein;protein_id=WP_001764931.1;transl_table=11
##sequence-region NZ_CAAR01000560.1 1 6104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000560.1	RefSeq	region	1	6104	.	+	.	ID=NZ_CAAR01000560.1:1..6104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000560.1	RefSeq	gene	1	3958	.	-	.	ID=gene-STY7866_RS18970;Name=STY7866_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18970;partial=true;start_range=.,1
NZ_CAAR01000560.1	Protein Homology	CDS	1	3958	.	-	0	ID=cds-WP_000527201.1;Parent=gene-STY7866_RS18970;Dbxref=Genbank:WP_000527201.1;Name=WP_000527201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=STY7866_RS18970;partial=true;product=Ig-like domain repeat protein;protein_id=WP_000527201.1;start_range=.,1;transl_table=11
NZ_CAAR01000560.1	RefSeq	pseudogene	3975	5253	.	-	.	ID=gene-STY7866_RS18975;Name=STY7866_RS18975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18975;pseudo=true
NZ_CAAR01000560.1	Protein Homology	CDS	3975	5253	.	-	0	ID=cds-STY7866_RS18975;Parent=gene-STY7866_RS18975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458557.1;locus_tag=STY7866_RS18975;product=HlyD family type I secretion periplasmic adaptor subunit;pseudo=true;transl_table=11
NZ_CAAR01000560.1	RefSeq	gene	5250	6104	.	-	.	ID=gene-STY7866_RS18980;Name=STY7866_RS18980;end_range=6104,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18980;partial=true
NZ_CAAR01000560.1	Protein Homology	CDS	5250	6104	.	-	0	ID=cds-WP_000574808.1;Parent=gene-STY7866_RS18980;Dbxref=Genbank:WP_000574808.1;Name=WP_000574808.1;end_range=6104,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458556.1;locus_tag=STY7866_RS18980;partial=true;product=TolC family protein;protein_id=WP_000574808.1;transl_table=11
##sequence-region NZ_CAAR01000559.1 1 964
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000559.1	RefSeq	region	1	964	.	+	.	ID=NZ_CAAR01000559.1:1..964;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000559.1	RefSeq	gene	1	126	.	+	.	ID=gene-STY7866_RS18955;Name=STY7866_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18955;partial=true;start_range=.,1
NZ_CAAR01000559.1	Protein Homology	CDS	1	126	.	+	0	ID=cds-WP_001764925.1;Parent=gene-STY7866_RS18955;Dbxref=Genbank:WP_001764925.1;Name=WP_001764925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457218.1;locus_tag=STY7866_RS18955;partial=true;product=HAD-IA family hydrolase;protein_id=WP_001764925.1;start_range=.,1;transl_table=11
NZ_CAAR01000559.1	RefSeq	gene	123	548	.	+	.	ID=gene-STY7866_RS18960;Name=STY7866_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18960
NZ_CAAR01000559.1	Protein Homology	CDS	123	548	.	+	0	ID=cds-WP_001279499.1;Parent=gene-STY7866_RS18960;Dbxref=Genbank:WP_001279499.1;Name=WP_001279499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457217.1;locus_tag=STY7866_RS18960;product=DedA family protein;protein_id=WP_001279499.1;transl_table=11
NZ_CAAR01000559.1	RefSeq	pseudogene	625	964	.	+	.	ID=gene-STY7866_RS18965;Name=STY7866_RS18965;end_range=964,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18965;partial=true;pseudo=true
NZ_CAAR01000559.1	Protein Homology	CDS	625	964	.	+	0	ID=cds-STY7866_RS18965;Parent=gene-STY7866_RS18965;Note=involved in the first step of glutathione biosynthesis%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=964,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457216.1;locus_tag=STY7866_RS18965;partial=true;product=glutamate--cysteine ligase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000558.1 1 634
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000558.1	RefSeq	region	1	634	.	+	.	ID=NZ_CAAR01000558.1:1..634;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000558.1	RefSeq	gene	132	634	.	-	.	ID=gene-STY7866_RS18950;Name=STY7866_RS18950;end_range=634,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18950;partial=true
NZ_CAAR01000558.1	Protein Homology	CDS	132	634	.	-	2	ID=cds-WP_000305824.1;Parent=gene-STY7866_RS18950;Dbxref=Genbank:WP_000305824.1;Name=WP_000305824.1;end_range=634,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455830.1;locus_tag=STY7866_RS18950;partial=true;product=helix-turn-helix transcriptional regulator;protein_id=WP_000305824.1;transl_table=11
##sequence-region NZ_CAAR01000557.1 1 2875
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000557.1	RefSeq	region	1	2875	.	+	.	ID=NZ_CAAR01000557.1:1..2875;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000557.1	RefSeq	gene	17	484	.	-	.	ID=gene-STY7866_RS18935;Name=STY7866_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18935
NZ_CAAR01000557.1	Protein Homology	CDS	17	484	.	-	0	ID=cds-WP_001277136.1;Parent=gene-STY7866_RS18935;Dbxref=Genbank:WP_001277136.1;Name=WP_001277136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457795.1;locus_tag=STY7866_RS18935;product=thioesterase family protein;protein_id=WP_001277136.1;transl_table=11
NZ_CAAR01000557.1	RefSeq	gene	649	1518	.	+	.	ID=gene-STY7866_RS18940;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=STY7866_RS18940
NZ_CAAR01000557.1	Protein Homology	CDS	649	1518	.	+	0	ID=cds-WP_001201692.1;Parent=gene-STY7866_RS18940;Dbxref=Genbank:WP_001201692.1;Name=WP_001201692.1;gbkey=CDS;gene=pldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457794.1;locus_tag=STY7866_RS18940;product=phospholipase A;protein_id=WP_001201692.1;transl_table=11
NZ_CAAR01000557.1	RefSeq	gene	1602	2875	.	+	.	ID=gene-STY7866_RS18945;Name=recQ;end_range=2875,.;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=STY7866_RS18945;partial=true
NZ_CAAR01000557.1	Protein Homology	CDS	1602	2875	.	+	0	ID=cds-WP_024151100.1;Parent=gene-STY7866_RS18945;Dbxref=Genbank:WP_024151100.1;Name=WP_024151100.1;end_range=2875,.;gbkey=CDS;gene=recQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457793.3;locus_tag=STY7866_RS18945;partial=true;product=DNA helicase RecQ;protein_id=WP_024151100.1;transl_table=11
##sequence-region NZ_CAAR01000556.1 1 683
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000556.1	RefSeq	region	1	683	.	+	.	ID=NZ_CAAR01000556.1:1..683;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000556.1	RefSeq	gene	123	683	.	-	.	ID=gene-STY7866_RS18930;Name=STY7866_RS18930;end_range=683,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18930;partial=true
NZ_CAAR01000556.1	Protein Homology	CDS	123	683	.	-	0	ID=cds-WP_000329411.1;Parent=gene-STY7866_RS18930;Dbxref=Genbank:WP_000329411.1;Name=WP_000329411.1;end_range=683,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457065.1;locus_tag=STY7866_RS18930;partial=true;product=DUF5066 family protein;protein_id=WP_000329411.1;transl_table=11
##sequence-region NZ_CAAR01000555.1 1 3117
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000555.1	RefSeq	region	1	3117	.	+	.	ID=NZ_CAAR01000555.1:1..3117;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000555.1	RefSeq	gene	28	1428	.	-	.	ID=gene-STY7866_RS18915;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=STY7866_RS18915
NZ_CAAR01000555.1	Protein Homology	CDS	28	1428	.	-	0	ID=cds-WP_000117867.1;Parent=gene-STY7866_RS18915;Dbxref=Genbank:WP_000117867.1;Name=WP_000117867.1;gbkey=CDS;gene=asnS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=STY7866_RS18915;product=asparagine--tRNA ligase;protein_id=WP_000117867.1;transl_table=11
NZ_CAAR01000555.1	RefSeq	gene	1629	2090	.	-	.	ID=gene-STY7866_RS18920;Name=STY7866_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18920
NZ_CAAR01000555.1	Protein Homology	CDS	1629	2090	.	-	0	ID=cds-WP_000762345.1;Parent=gene-STY7866_RS18920;Dbxref=Genbank:WP_000762345.1;Name=WP_000762345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455487.1;locus_tag=STY7866_RS18920;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_000762345.1;transl_table=11
NZ_CAAR01000555.1	RefSeq	pseudogene	2087	2321	.	-	.	ID=gene-STY7866_RS27720;Name=STY7866_RS27720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27720;pseudo=true
NZ_CAAR01000555.1	Protein Homology	CDS	2087	2321	.	-	0	ID=cds-STY7866_RS27720;Parent=gene-STY7866_RS27720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301923.1;locus_tag=STY7866_RS27720;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000555.1	RefSeq	gene	2408	3117	.	+	.	ID=gene-STY7866_RS18925;Name=STY7866_RS18925;end_range=3117,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18925;partial=true
NZ_CAAR01000555.1	Protein Homology	CDS	2408	3117	.	+	0	ID=cds-WP_000544854.1;Parent=gene-STY7866_RS18925;Dbxref=Genbank:WP_000544854.1;Name=WP_000544854.1;end_range=3117,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=STY7866_RS18925;partial=true;product=diaminopropionate ammonia-lyase;protein_id=WP_000544854.1;transl_table=11
##sequence-region NZ_CAAR01000554.1 1 1554
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000554.1	RefSeq	region	1	1554	.	+	.	ID=NZ_CAAR01000554.1:1..1554;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000554.1	RefSeq	gene	1	855	.	+	.	ID=gene-STY7866_RS18905;Name=STY7866_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18905;partial=true;start_range=.,1
NZ_CAAR01000554.1	Protein Homology	CDS	1	855	.	+	0	ID=cds-WP_000292336.1;Parent=gene-STY7866_RS18905;Dbxref=Genbank:WP_000292336.1;Name=WP_000292336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458114.1;locus_tag=STY7866_RS18905;partial=true;product=DUF4056 domain-containing protein;protein_id=WP_000292336.1;start_range=.,1;transl_table=11
NZ_CAAR01000554.1	RefSeq	gene	960	1554	.	-	.	ID=gene-STY7866_RS18910;Name=STY7866_RS18910;end_range=1554,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18910;partial=true
NZ_CAAR01000554.1	Protein Homology	CDS	960	1554	.	-	1	ID=cds-WP_000629962.1;Parent=gene-STY7866_RS18910;Dbxref=Genbank:WP_000629962.1;Name=WP_000629962.1;end_range=1554,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458115.1;locus_tag=STY7866_RS18910;partial=true;product=response regulator;protein_id=WP_000629962.1;transl_table=11
##sequence-region NZ_CAAR01000553.1 1 524
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000553.1	RefSeq	region	1	524	.	+	.	ID=NZ_CAAR01000553.1:1..524;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000553.1	RefSeq	pseudogene	1	524	.	-	.	ID=gene-STY7866_RS18900;Name=STY7866_RS18900;end_range=524,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18900;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000553.1	Protein Homology	CDS	1	524	.	-	2	ID=cds-STY7866_RS18900;Parent=gene-STY7866_RS18900;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=524,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=STY7866_RS18900;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000552.1 1 1167
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000552.1	RefSeq	region	1	1167	.	+	.	ID=NZ_CAAR01000552.1:1..1167;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000552.1	RefSeq	gene	148	366	.	-	.	ID=gene-STY7866_RS18890;Name=STY7866_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18890
NZ_CAAR01000552.1	Protein Homology	CDS	148	366	.	-	0	ID=cds-WP_000758664.1;Parent=gene-STY7866_RS18890;Dbxref=Genbank:WP_000758664.1;Name=WP_000758664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457401.1;locus_tag=STY7866_RS18890;product=YgdI/YgdR family lipoprotein;protein_id=WP_000758664.1;transl_table=11
NZ_CAAR01000552.1	RefSeq	gene	537	1167	.	-	.	ID=gene-STY7866_RS18895;Name=STY7866_RS18895;end_range=1167,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18895;partial=true
NZ_CAAR01000552.1	Protein Homology	CDS	537	1167	.	-	1	ID=cds-WP_000293330.1;Parent=gene-STY7866_RS18895;Dbxref=Genbank:WP_000293330.1;Name=WP_000293330.1;end_range=1167,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457400.1;locus_tag=STY7866_RS18895;partial=true;product=TerC family protein;protein_id=WP_000293330.1;transl_table=11
##sequence-region NZ_CAAR01000551.1 1 537
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000551.1	RefSeq	region	1	537	.	+	.	ID=NZ_CAAR01000551.1:1..537;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000551.1	RefSeq	gene	87	537	.	+	.	ID=gene-STY7866_RS18885;Name=STY7866_RS18885;end_range=537,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18885;partial=true
NZ_CAAR01000551.1	Protein Homology	CDS	87	537	.	+	0	ID=cds-WP_024151099.1;Parent=gene-STY7866_RS18885;Dbxref=Genbank:WP_024151099.1;Name=WP_024151099.1;end_range=537,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455501.1;locus_tag=STY7866_RS18885;partial=true;product=regulatory protein;protein_id=WP_024151099.1;transl_table=11
##sequence-region NZ_CAAR01000550.1 1 1978
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000550.1	RefSeq	region	1	1978	.	+	.	ID=NZ_CAAR01000550.1:1..1978;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000550.1	RefSeq	pseudogene	1	503	.	+	.	ID=gene-STY7866_RS18860;Name=STY7866_RS18860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18860;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000550.1	Protein Homology	CDS	1	503	.	+	1	ID=cds-STY7866_RS18860;Parent=gene-STY7866_RS18860;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455501.1;locus_tag=STY7866_RS18860;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000550.1	RefSeq	gene	506	1255	.	+	.	ID=gene-STY7866_RS18865;Name=STY7866_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18865
NZ_CAAR01000550.1	Protein Homology	CDS	506	1255	.	+	0	ID=cds-WP_000800010.1;Parent=gene-STY7866_RS18865;Dbxref=Genbank:WP_000800010.1;Name=WP_000800010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455502.1;locus_tag=STY7866_RS18865;product=ATP-binding protein;protein_id=WP_000800010.1;transl_table=11
NZ_CAAR01000550.1	RefSeq	gene	1266	1613	.	+	.	ID=gene-STY7866_RS18870;Name=STY7866_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18870
NZ_CAAR01000550.1	Protein Homology	CDS	1266	1613	.	+	0	ID=cds-WP_000113623.1;Parent=gene-STY7866_RS18870;Dbxref=Genbank:WP_000113623.1;Name=WP_000113623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455503.1;locus_tag=STY7866_RS18870;product=DUF977 family protein;protein_id=WP_000113623.1;transl_table=11
NZ_CAAR01000550.1	RefSeq	gene	1610	1978	.	+	.	ID=gene-STY7866_RS18875;Name=STY7866_RS18875;end_range=1978,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18875;partial=true
NZ_CAAR01000550.1	Protein Homology	CDS	1610	1978	.	+	0	ID=cds-WP_000065103.1;Parent=gene-STY7866_RS18875;Dbxref=Genbank:WP_000065103.1;Name=WP_000065103.1;end_range=1978,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455504.1;locus_tag=STY7866_RS18875;partial=true;product=ead/Ea22-like family protein;protein_id=WP_000065103.1;transl_table=11
##sequence-region NZ_CAAR01000549.1 1 2813
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000549.1	RefSeq	region	1	2813	.	+	.	ID=NZ_CAAR01000549.1:1..2813;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000549.1	RefSeq	gene	337	723	.	+	.	ID=gene-STY7866_RS18840;Name=STY7866_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18840
NZ_CAAR01000549.1	Protein Homology	CDS	337	723	.	+	0	ID=cds-WP_001682143.1;Parent=gene-STY7866_RS18840;Dbxref=Genbank:WP_001682143.1;Name=WP_001682143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456565.1;locus_tag=STY7866_RS18840;product=hypothetical protein;protein_id=WP_001682143.1;transl_table=11
NZ_CAAR01000549.1	RefSeq	gene	717	1043	.	+	.	ID=gene-STY7866_RS18845;Name=STY7866_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18845
NZ_CAAR01000549.1	Protein Homology	CDS	717	1043	.	+	0	ID=cds-WP_000886449.1;Parent=gene-STY7866_RS18845;Dbxref=Genbank:WP_000886449.1;Name=WP_000886449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456564.1;locus_tag=STY7866_RS18845;product=DUF1493 family protein;protein_id=WP_000886449.1;transl_table=11
NZ_CAAR01000549.1	RefSeq	gene	1032	1193	.	-	.	ID=gene-STY7866_RS18850;Name=STY7866_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18850
NZ_CAAR01000549.1	Protein Homology	CDS	1032	1193	.	-	0	ID=cds-WP_001634510.1;Parent=gene-STY7866_RS18850;Dbxref=Genbank:WP_001634510.1;Name=WP_001634510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=STY7866_RS18850;product=hypothetical protein;protein_id=WP_001634510.1;transl_table=11
NZ_CAAR01000549.1	RefSeq	gene	1239	2693	.	+	.	ID=gene-STY7866_RS18855;Name=STY7866_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18855
NZ_CAAR01000549.1	Protein Homology	CDS	1239	2693	.	+	0	ID=cds-WP_000428186.1;Parent=gene-STY7866_RS18855;Dbxref=Genbank:WP_000428186.1;Name=WP_000428186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456562.1;locus_tag=STY7866_RS18855;product=AMP nucleosidase;protein_id=WP_000428186.1;transl_table=11
##sequence-region NZ_CAAR01000548.1 1 244
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000548.1	RefSeq	region	1	244	.	+	.	ID=NZ_CAAR01000548.1:1..244;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000548.1	RefSeq	gene	161	236	.	-	.	ID=gene-STY7866_RS18835;Name=STY7866_RS18835;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS18835
NZ_CAAR01000548.1	tRNAscan-SE	tRNA	161	236	.	-	.	ID=rna-STY7866_RS18835;Parent=gene-STY7866_RS18835;anticodon=(pos:complement(201..203));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS18835;product=tRNA-Asn
NZ_CAAR01000548.1	tRNAscan-SE	exon	161	236	.	-	.	ID=exon-STY7866_RS18835-1;Parent=rna-STY7866_RS18835;anticodon=(pos:complement(201..203));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS18835;product=tRNA-Asn
##sequence-region NZ_CAAR01000547.1 1 1741
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000547.1	RefSeq	region	1	1741	.	+	.	ID=NZ_CAAR01000547.1:1..1741;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000547.1	RefSeq	gene	133	1590	.	-	.	ID=gene-STY7866_RS18825;Name=STY7866_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18825
NZ_CAAR01000547.1	Protein Homology	CDS	133	1590	.	-	0	ID=cds-WP_001760573.1;Parent=gene-STY7866_RS18825;Dbxref=Genbank:WP_001760573.1;Name=WP_001760573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456567.1;locus_tag=STY7866_RS18825;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_001760573.1;transl_table=11
##sequence-region NZ_CAAR01000546.1 1 3365
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000546.1	RefSeq	region	1	3365	.	+	.	ID=NZ_CAAR01000546.1:1..3365;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000546.1	RefSeq	pseudogene	1	180	.	-	.	ID=gene-STY7866_RS18805;Name=STY7866_RS18805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18805;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000546.1	Protein Homology	CDS	1	180	.	-	0	ID=cds-STY7866_RS18805;Parent=gene-STY7866_RS18805;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456029.1;locus_tag=STY7866_RS18805;partial=true;product=phage virion morphogenesis protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000546.1	RefSeq	gene	183	1004	.	-	.	ID=gene-STY7866_RS18810;Name=STY7866_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18810
NZ_CAAR01000546.1	Protein Homology	CDS	183	1004	.	-	0	ID=cds-WP_000117560.1;Parent=gene-STY7866_RS18810;Dbxref=Genbank:WP_000117560.1;Name=WP_000117560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456028.1;locus_tag=STY7866_RS18810;product=phage head morphogenesis protein;protein_id=WP_000117560.1;transl_table=11
NZ_CAAR01000546.1	RefSeq	gene	985	2481	.	-	.	ID=gene-STY7866_RS18815;Name=STY7866_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18815
NZ_CAAR01000546.1	Protein Homology	CDS	985	2481	.	-	0	ID=cds-WP_000090679.1;Parent=gene-STY7866_RS18815;Dbxref=Genbank:WP_000090679.1;Name=WP_000090679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456027.1;locus_tag=STY7866_RS18815;product=DUF935 domain-containing protein;protein_id=WP_000090679.1;transl_table=11
NZ_CAAR01000546.1	RefSeq	pseudogene	2481	3365	.	-	.	ID=gene-STY7866_RS18820;Name=STY7866_RS18820;end_range=3365,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18820;partial=true;pseudo=true
NZ_CAAR01000546.1	Protein Homology	CDS	2481	3365	.	-	0	ID=cds-STY7866_RS18820;Parent=gene-STY7866_RS18820;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3365,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456026.1;locus_tag=STY7866_RS18820;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000545.1 1 1609
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000545.1	RefSeq	region	1	1609	.	+	.	ID=NZ_CAAR01000545.1:1..1609;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000545.1	RefSeq	pseudogene	1	408	.	+	.	ID=gene-STY7866_RS18790;Name=STY7866_RS18790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18790;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000545.1	Protein Homology	CDS	1	408	.	+	0	ID=cds-STY7866_RS18790;Parent=gene-STY7866_RS18790;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456884.3;locus_tag=STY7866_RS18790;partial=true;product=PTS ascorbate transporter subunit IIC;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000545.1	RefSeq	gene	405	1235	.	+	.	ID=gene-STY7866_RS18795;Name=STY7866_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18795
NZ_CAAR01000545.1	Protein Homology	CDS	405	1235	.	+	0	ID=cds-WP_001103260.1;Parent=gene-STY7866_RS18795;Dbxref=Genbank:WP_001103260.1;Name=WP_001103260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456883.1;locus_tag=STY7866_RS18795;product=transketolase;protein_id=WP_001103260.1;transl_table=11
NZ_CAAR01000545.1	RefSeq	pseudogene	1228	1609	.	+	.	ID=gene-STY7866_RS18800;Name=STY7866_RS18800;end_range=1609,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18800;partial=true;pseudo=true
NZ_CAAR01000545.1	Protein Homology	CDS	1228	1609	.	+	0	ID=cds-STY7866_RS18800;Parent=gene-STY7866_RS18800;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1609,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456882.1;locus_tag=STY7866_RS18800;partial=true;product=transketolase family protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000544.1 1 1531
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000544.1	RefSeq	region	1	1531	.	+	.	ID=NZ_CAAR01000544.1:1..1531;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000544.1	RefSeq	gene	1	244	.	+	.	ID=gene-STY7866_RS18780;Name=STY7866_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18780;partial=true;start_range=.,1
NZ_CAAR01000544.1	Protein Homology	CDS	1	244	.	+	1	ID=cds-WP_000325745.1;Parent=gene-STY7866_RS18780;Dbxref=Genbank:WP_000325745.1;Name=WP_000325745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458278.1;locus_tag=STY7866_RS18780;partial=true;product=DUF3053 family protein;protein_id=WP_000325745.1;start_range=.,1;transl_table=11
NZ_CAAR01000544.1	RefSeq	gene	294	1268	.	-	.	ID=gene-STY7866_RS18785;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=STY7866_RS18785
NZ_CAAR01000544.1	Protein Homology	CDS	294	1268	.	-	0	ID=cds-WP_000804690.1;Parent=gene-STY7866_RS18785;Dbxref=Genbank:WP_000804690.1;Name=WP_000804690.1;gbkey=CDS;gene=ghrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458279.1;locus_tag=STY7866_RS18785;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000804690.1;transl_table=11
##sequence-region NZ_CAAR01000543.1 1 782
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000543.1	RefSeq	region	1	782	.	+	.	ID=NZ_CAAR01000543.1:1..782;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000543.1	RefSeq	gene	1	396	.	-	.	ID=gene-STY7866_RS18765;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=STY7866_RS18765;partial=true;start_range=.,1
NZ_CAAR01000543.1	Protein Homology	CDS	1	396	.	-	0	ID=cds-WP_000011582.1;Parent=gene-STY7866_RS18765;Dbxref=Genbank:WP_000011582.1;Name=WP_000011582.1;gbkey=CDS;gene=kdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455474.1;locus_tag=STY7866_RS18765;partial=true;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011582.1;start_range=.,1;transl_table=11
NZ_CAAR01000543.1	RefSeq	gene	393	575	.	-	.	ID=gene-STY7866_RS18770;Name=STY7866_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18770
NZ_CAAR01000543.1	Protein Homology	CDS	393	575	.	-	0	ID=cds-WP_000350061.1;Parent=gene-STY7866_RS18770;Dbxref=Genbank:WP_000350061.1;Name=WP_000350061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455473.1;locus_tag=STY7866_RS18770;product=protein YcaR;protein_id=WP_000350061.1;transl_table=11
NZ_CAAR01000543.1	RefSeq	pseudogene	627	782	.	-	.	ID=gene-STY7866_RS27715;Name=STY7866_RS27715;end_range=782,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27715;partial=true;pseudo=true
NZ_CAAR01000543.1	Protein Homology	CDS	627	782	.	-	0	ID=cds-STY7866_RS27715;Parent=gene-STY7866_RS27715;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=782,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=STY7866_RS27715;partial=true;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000542.1 1 2172
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000542.1	RefSeq	region	1	2172	.	+	.	ID=NZ_CAAR01000542.1:1..2172;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000542.1	RefSeq	pseudogene	1	1057	.	-	.	ID=gene-STY7866_RS18755;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=pseudogene;locus_tag=STY7866_RS18755;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000542.1	Protein Homology	CDS	1	1057	.	-	0	ID=cds-STY7866_RS18755;Parent=gene-STY7866_RS18755;Note=includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001490315.1;locus_tag=STY7866_RS18755;partial=true;product=fatty acid oxidation complex subunit alpha FadB;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000542.1	RefSeq	gene	1246	2172	.	+	.	ID=gene-STY7866_RS18760;Name=pepQ;end_range=2172,.;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=STY7866_RS18760;partial=true
NZ_CAAR01000542.1	Protein Homology	CDS	1246	2172	.	+	0	ID=cds-WP_000444526.1;Parent=gene-STY7866_RS18760;Dbxref=Genbank:WP_000444526.1;Name=WP_000444526.1;end_range=2172,.;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=STY7866_RS18760;partial=true;product=Xaa-Pro dipeptidase;protein_id=WP_000444526.1;transl_table=11
##sequence-region NZ_CAAR01000541.1 1 1679
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000541.1	RefSeq	region	1	1679	.	+	.	ID=NZ_CAAR01000541.1:1..1679;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000541.1	RefSeq	pseudogene	1	863	.	-	.	ID=gene-STY7866_RS27705;Name=STY7866_RS27705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27705;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000541.1	Protein Homology	CDS	1	863	.	-	0	ID=cds-STY7866_RS27705;Parent=gene-STY7866_RS27705;Note=biodegradative%3B catalyzes the formation of agmatine from arginine%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715768.1;locus_tag=STY7866_RS27705;partial=true;product=arginine decarboxylase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000541.1	RefSeq	pseudogene	988	1679	.	-	.	ID=gene-STY7866_RS27710;Name=STY7866_RS27710;end_range=1679,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27710;partial=true;pseudo=true
NZ_CAAR01000541.1	Protein Homology	CDS	988	1679	.	-	2	ID=cds-STY7866_RS27710;Parent=gene-STY7866_RS27710;Note=biodegradative%3B catalyzes the formation of agmatine from arginine%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1679,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01276.18;locus_tag=STY7866_RS27710;partial=true;product=arginine decarboxylase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000540.1 1 3233
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000540.1	RefSeq	region	1	3233	.	+	.	ID=NZ_CAAR01000540.1:1..3233;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000540.1	RefSeq	gene	1	1058	.	-	.	ID=gene-STY7866_RS18730;Name=STY7866_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18730;partial=true;start_range=.,1
NZ_CAAR01000540.1	Protein Homology	CDS	1	1058	.	-	0	ID=cds-WP_001764884.1;Parent=gene-STY7866_RS18730;Dbxref=Genbank:WP_001764884.1;Name=WP_001764884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457449.1;locus_tag=STY7866_RS18730;partial=true;product=6-phospho-beta-glucosidase;protein_id=WP_001764884.1;start_range=.,1;transl_table=11
NZ_CAAR01000540.1	RefSeq	gene	1217	1528	.	+	.	ID=gene-STY7866_RS18735;Name=STY7866_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18735
NZ_CAAR01000540.1	Protein Homology	CDS	1217	1528	.	+	0	ID=cds-WP_001182971.1;Parent=gene-STY7866_RS18735;Dbxref=Genbank:WP_001182971.1;Name=WP_001182971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457448.1;locus_tag=STY7866_RS18735;product=ASCH domain-containing protein;protein_id=WP_001182971.1;transl_table=11
NZ_CAAR01000540.1	RefSeq	gene	1692	2351	.	+	.	ID=gene-STY7866_RS18740;Name=STY7866_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18740
NZ_CAAR01000540.1	Protein Homology	CDS	1692	2351	.	+	0	ID=cds-WP_000250289.1;Parent=gene-STY7866_RS18740;Dbxref=Genbank:WP_000250289.1;Name=WP_000250289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457447.1;locus_tag=STY7866_RS18740;product=hemolysin III family protein;protein_id=WP_000250289.1;transl_table=11
NZ_CAAR01000540.1	RefSeq	gene	2467	3233	.	-	.	ID=gene-STY7866_RS18745;Name=ygfZ;end_range=3233,.;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=STY7866_RS18745;partial=true
NZ_CAAR01000540.1	Protein Homology	CDS	2467	3233	.	-	2	ID=cds-WP_000696330.1;Parent=gene-STY7866_RS18745;Dbxref=Genbank:WP_000696330.1;Name=WP_000696330.1;end_range=3233,.;gbkey=CDS;gene=ygfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457446.1;locus_tag=STY7866_RS18745;partial=true;product=tRNA-modifying protein YgfZ;protein_id=WP_000696330.1;transl_table=11
##sequence-region NZ_CAAR01000539.1 1 6043
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000539.1	RefSeq	region	1	6043	.	+	.	ID=NZ_CAAR01000539.1:1..6043;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000539.1	RefSeq	pseudogene	1	1039	.	+	.	ID=gene-STY7866_RS18695;Name=STY7866_RS18695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18695;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000539.1	Protein Homology	CDS	1	1039	.	+	0	ID=cds-STY7866_RS18695;Parent=gene-STY7866_RS18695;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455160.1;locus_tag=STY7866_RS18695;partial=true;product=glutamate--cysteine ligase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000539.1	RefSeq	gene	1106	1354	.	+	.	ID=gene-STY7866_RS18700;Name=STY7866_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18700
NZ_CAAR01000539.1	Protein Homology	CDS	1106	1354	.	+	0	ID=cds-WP_000682500.1;Parent=gene-STY7866_RS18700;Dbxref=Genbank:WP_000682500.1;Name=WP_000682500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455159.1;locus_tag=STY7866_RS18700;product=DUF1158 family protein;protein_id=WP_000682500.1;transl_table=11
NZ_CAAR01000539.1	RefSeq	gene	1360	1701	.	-	.	ID=gene-STY7866_RS18705;Name=ramA;gbkey=Gene;gene=ramA;gene_biotype=protein_coding;locus_tag=STY7866_RS18705
NZ_CAAR01000539.1	Protein Homology	CDS	1360	1701	.	-	0	ID=cds-WP_000155638.1;Parent=gene-STY7866_RS18705;Dbxref=Genbank:WP_000155638.1;Name=WP_000155638.1;gbkey=CDS;gene=ramA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455158.1;locus_tag=STY7866_RS18705;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_000155638.1;transl_table=11
NZ_CAAR01000539.1	RefSeq	gene	1990	2571	.	+	.	ID=gene-STY7866_RS18710;Name=STY7866_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18710
NZ_CAAR01000539.1	Protein Homology	CDS	1990	2571	.	+	0	ID=cds-WP_000113603.1;Parent=gene-STY7866_RS18710;Dbxref=Genbank:WP_000113603.1;Name=WP_000113603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455157.1;locus_tag=STY7866_RS18710;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000113603.1;transl_table=11
NZ_CAAR01000539.1	RefSeq	gene	2571	2939	.	+	.	ID=gene-STY7866_RS18715;Name=STY7866_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18715
NZ_CAAR01000539.1	Protein Homology	CDS	2571	2939	.	+	0	ID=cds-WP_000348987.1;Parent=gene-STY7866_RS18715;Dbxref=Genbank:WP_000348987.1;Name=WP_000348987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455156.1;locus_tag=STY7866_RS18715;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000348987.1;transl_table=11
NZ_CAAR01000539.1	RefSeq	gene	3036	3689	.	+	.	ID=gene-STY7866_RS18720;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=STY7866_RS18720
NZ_CAAR01000539.1	Protein Homology	CDS	3036	3689	.	+	0	ID=cds-WP_000355874.1;Parent=gene-STY7866_RS18720;Dbxref=Genbank:WP_000355874.1;Name=WP_000355874.1;gbkey=CDS;gene=nfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455155.1;locus_tag=STY7866_RS18720;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000355874.1;transl_table=11
NZ_CAAR01000539.1	RefSeq	pseudogene	3889	4014	.	+	.	ID=gene-STY7866_RS27700;Name=STY7866_RS27700;end_range=4014,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27700;partial=true;pseudo=true
NZ_CAAR01000539.1	Protein Homology	CDS	3889	4014	.	+	0	ID=cds-STY7866_RS27700;Parent=gene-STY7866_RS27700;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4014,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459569.1;locus_tag=STY7866_RS27700;partial=true;product=PTS mannose transporter subunit IIAB;pseudo=true;transl_table=11
NZ_CAAR01000539.1	RefSeq	pseudogene	4044	6015	.	-	.	ID=gene-STY7866_RS18725;Name=STY7866_RS18725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18725;pseudo=true
NZ_CAAR01000539.1	Protein Homology	CDS	4044	6015	.	-	0	ID=cds-STY7866_RS18725;Parent=gene-STY7866_RS18725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455154.1;locus_tag=STY7866_RS18725;product=autotransporter domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000538.1 1 3453
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000538.1	RefSeq	region	1	3453	.	+	.	ID=NZ_CAAR01000538.1:1..3453;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000538.1	RefSeq	gene	1	1981	.	-	.	ID=gene-STY7866_RS18675;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=STY7866_RS18675;partial=true;start_range=.,1
NZ_CAAR01000538.1	Protein Homology	CDS	1	1981	.	-	0	ID=cds-WP_024151097.1;Parent=gene-STY7866_RS18675;Dbxref=Genbank:WP_024151097.1;Name=WP_024151097.1;gbkey=CDS;gene=mutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457300.1;locus_tag=STY7866_RS18675;partial=true;product=DNA mismatch repair protein MutS;protein_id=WP_024151097.1;start_range=.,1;transl_table=11
NZ_CAAR01000538.1	RefSeq	pseudogene	2139	2545	.	+	.	ID=gene-STY7866_RS18680;Name=STY7866_RS18680;end_range=2545,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18680;partial=true;pseudo=true
NZ_CAAR01000538.1	Protein Homology	CDS	2139	2545	.	+	0	ID=cds-STY7866_RS18680;Parent=gene-STY7866_RS18680;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2545,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000858990.1;locus_tag=STY7866_RS18680;partial=true;product=cytoplasmic protein;pseudo=true;transl_table=11
NZ_CAAR01000538.1	RefSeq	gene	2829	3453	.	-	.	ID=gene-STY7866_RS18690;Name=pphB;end_range=3453,.;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=STY7866_RS18690;partial=true
NZ_CAAR01000538.1	Protein Homology	CDS	2829	3453	.	-	1	ID=cds-WP_000322987.1;Parent=gene-STY7866_RS18690;Dbxref=Genbank:WP_000322987.1;Name=WP_000322987.1;end_range=3453,.;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457297.1;locus_tag=STY7866_RS18690;partial=true;product=protein-serine/threonine phosphatase;protein_id=WP_000322987.1;transl_table=11
##sequence-region NZ_CAAR01000537.1 1 1815
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000537.1	RefSeq	region	1	1815	.	+	.	ID=NZ_CAAR01000537.1:1..1815;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000537.1	RefSeq	gene	214	1698	.	-	.	ID=gene-STY7866_RS18670;Name=STY7866_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18670
NZ_CAAR01000537.1	Protein Homology	CDS	214	1698	.	-	0	ID=cds-WP_001286412.1;Parent=gene-STY7866_RS18670;Dbxref=Genbank:WP_001286412.1;Name=WP_001286412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457525.1;locus_tag=STY7866_RS18670;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=WP_001286412.1;transl_table=11
##sequence-region NZ_CAAR01000536.1 1 2556
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000536.1	RefSeq	region	1	2556	.	+	.	ID=NZ_CAAR01000536.1:1..2556;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000536.1	RefSeq	pseudogene	1	185	.	-	.	ID=gene-STY7866_RS26490;Name=STY7866_RS26490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26490;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000536.1	Protein Homology	CDS	1	185	.	-	0	ID=cds-STY7866_RS26490;Parent=gene-STY7866_RS26490;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455039.1;locus_tag=STY7866_RS26490;partial=true;product=cytochrome O ubiquinol oxidase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000536.1	RefSeq	gene	196	1152	.	-	.	ID=gene-STY7866_RS18655;Name=STY7866_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18655
NZ_CAAR01000536.1	Protein Homology	CDS	196	1152	.	-	0	ID=cds-WP_001239449.1;Parent=gene-STY7866_RS18655;Dbxref=Genbank:WP_001239449.1;Name=WP_001239449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455040.1;locus_tag=STY7866_RS18655;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239449.1;transl_table=11
NZ_CAAR01000536.1	RefSeq	gene	1605	2556	.	-	.	ID=gene-STY7866_RS18660;Name=STY7866_RS18660;end_range=2556,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18660;partial=true
NZ_CAAR01000536.1	Protein Homology	CDS	1605	2556	.	-	1	ID=cds-WP_000289873.1;Parent=gene-STY7866_RS18660;Dbxref=Genbank:WP_000289873.1;Name=WP_000289873.1;end_range=2556,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455041.1;locus_tag=STY7866_RS18660;partial=true;product=MFS transporter;protein_id=WP_000289873.1;transl_table=11
##sequence-region NZ_CAAR01000535.1 1 6571
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000535.1	RefSeq	region	1	6571	.	+	.	ID=NZ_CAAR01000535.1:1..6571;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000535.1	RefSeq	gene	117	899	.	+	.	ID=gene-STY7866_RS18620;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=STY7866_RS18620
NZ_CAAR01000535.1	Protein Homology	CDS	117	899	.	+	0	ID=cds-WP_000890022.1;Parent=gene-STY7866_RS18620;Dbxref=Genbank:WP_000890022.1;Name=WP_000890022.1;gbkey=CDS;gene=truC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457360.1;locus_tag=STY7866_RS18620;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890022.1;transl_table=11
NZ_CAAR01000535.1	RefSeq	gene	918	1367	.	+	.	ID=gene-STY7866_RS18625;Name=STY7866_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18625
NZ_CAAR01000535.1	Protein Homology	CDS	918	1367	.	+	0	ID=cds-WP_000807735.1;Parent=gene-STY7866_RS18625;Dbxref=Genbank:WP_000807735.1;Name=WP_000807735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457359.1;locus_tag=STY7866_RS18625;product=flavodoxin;protein_id=WP_000807735.1;transl_table=11
NZ_CAAR01000535.1	RefSeq	gene	1517	1765	.	-	.	ID=gene-STY7866_RS27695;Name=STY7866_RS27695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27695
NZ_CAAR01000535.1	GeneMarkS-2+	CDS	1517	1765	.	-	0	ID=cds-WP_001520548.1;Parent=gene-STY7866_RS27695;Dbxref=Genbank:WP_001520548.1;Name=WP_001520548.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=STY7866_RS27695;product=hypothetical protein;protein_id=WP_001520548.1;transl_table=11
NZ_CAAR01000535.1	RefSeq	gene	1848	3206	.	+	.	ID=gene-STY7866_RS18630;Name=STY7866_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18630
NZ_CAAR01000535.1	Protein Homology	CDS	1848	3206	.	+	0	ID=cds-WP_000097011.1;Parent=gene-STY7866_RS18630;Dbxref=Genbank:WP_000097011.1;Name=WP_000097011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457358.1;locus_tag=STY7866_RS18630;product=MFS transporter;protein_id=WP_000097011.1;transl_table=11
NZ_CAAR01000535.1	RefSeq	gene	3203	4543	.	+	.	ID=gene-STY7866_RS18635;Name=STY7866_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18635
NZ_CAAR01000535.1	Protein Homology	CDS	3203	4543	.	+	0	ID=cds-WP_000211809.1;Parent=gene-STY7866_RS18635;Dbxref=Genbank:WP_000211809.1;Name=WP_000211809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457357.1;locus_tag=STY7866_RS18635;product=glucarate dehydratase;protein_id=WP_000211809.1;transl_table=11
NZ_CAAR01000535.1	RefSeq	gene	4564	5904	.	+	.	ID=gene-STY7866_RS18640;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=STY7866_RS18640
NZ_CAAR01000535.1	Protein Homology	CDS	4564	5904	.	+	0	ID=cds-WP_000107120.1;Parent=gene-STY7866_RS18640;Dbxref=Genbank:WP_000107120.1;Name=WP_000107120.1;gbkey=CDS;gene=gudD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457356.1;locus_tag=STY7866_RS18640;product=glucarate dehydratase;protein_id=WP_000107120.1;transl_table=11
NZ_CAAR01000535.1	RefSeq	gene	5982	6571	.	+	.	ID=gene-STY7866_RS18645;Name=STY7866_RS18645;end_range=6571,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18645;partial=true
NZ_CAAR01000535.1	Protein Homology	CDS	5982	6571	.	+	0	ID=cds-WP_000706476.1;Parent=gene-STY7866_RS18645;Dbxref=Genbank:WP_000706476.1;Name=WP_000706476.1;end_range=6571,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457355.1;locus_tag=STY7866_RS18645;partial=true;product=glycerate kinase;protein_id=WP_000706476.1;transl_table=11
##sequence-region NZ_CAAR01000534.1 1 1939
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000534.1	RefSeq	region	1	1939	.	+	.	ID=NZ_CAAR01000534.1:1..1939;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000534.1	RefSeq	gene	10	1212	.	-	.	ID=gene-STY7866_RS18605;Name=STY7866_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18605
NZ_CAAR01000534.1	Protein Homology	CDS	10	1212	.	-	0	ID=cds-WP_000439232.1;Parent=gene-STY7866_RS18605;Dbxref=Genbank:WP_000439232.1;Name=WP_000439232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458329.1;locus_tag=STY7866_RS18605;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000439232.1;transl_table=11
NZ_CAAR01000534.1	RefSeq	pseudogene	1443	1939	.	+	.	ID=gene-STY7866_RS18610;Name=STY7866_RS18610;end_range=1939,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18610;partial=true;pseudo=true
NZ_CAAR01000534.1	Protein Homology	CDS	1443	1939	.	+	0	ID=cds-STY7866_RS18610;Parent=gene-STY7866_RS18610;Note=involved in the transport of inorganic phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1939,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458328.1;locus_tag=STY7866_RS18610;partial=true;product=anion permease;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000533.1 1 1047
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000533.1	RefSeq	region	1	1047	.	+	.	ID=NZ_CAAR01000533.1:1..1047;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000533.1	RefSeq	pseudogene	1	402	.	+	.	ID=gene-STY7866_RS18590;Name=STY7866_RS18590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18590;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000533.1	Protein Homology	CDS	1	402	.	+	0	ID=cds-STY7866_RS18590;Parent=gene-STY7866_RS18590;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=STY7866_RS18590;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000533.1	RefSeq	gene	417	863	.	-	.	ID=gene-STY7866_RS18595;Name=STY7866_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18595
NZ_CAAR01000533.1	Protein Homology	CDS	417	863	.	-	0	ID=cds-WP_001259009.1;Parent=gene-STY7866_RS18595;Dbxref=Genbank:WP_001259009.1;Name=WP_001259009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458021.1;locus_tag=STY7866_RS18595;product=type II toxin-antitoxin system HigA family antitoxin;protein_id=WP_001259009.1;transl_table=11
NZ_CAAR01000533.1	RefSeq	pseudogene	860	1047	.	-	.	ID=gene-STY7866_RS18600;Name=STY7866_RS18600;end_range=1047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18600;partial=true;pseudo=true
NZ_CAAR01000533.1	Protein Homology	CDS	860	1047	.	-	0	ID=cds-STY7866_RS18600;Parent=gene-STY7866_RS18600;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458020.1;locus_tag=STY7866_RS18600;partial=true;product=cytoplasmic protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000532.1 1 1104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000532.1	RefSeq	region	1	1104	.	+	.	ID=NZ_CAAR01000532.1:1..1104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000532.1	RefSeq	pseudogene	1	960	.	-	.	ID=gene-STY7866_RS18585;Name=STY7866_RS18585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18585;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000532.1	Protein Homology	CDS	1	960	.	-	0	ID=cds-STY7866_RS18585;Parent=gene-STY7866_RS18585;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454914.1;locus_tag=STY7866_RS18585;partial=true;product=fimbrial assembly protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000531.1 1 1106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000531.1	RefSeq	region	1	1106	.	+	.	ID=NZ_CAAR01000531.1:1..1106;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000531.1	RefSeq	pseudogene	1	146	.	+	.	ID=gene-STY7866_RS18570;Name=greA;gbkey=Gene;gene=greA;gene_biotype=pseudogene;locus_tag=STY7866_RS18570;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000531.1	Protein Homology	CDS	1	146	.	+	2	ID=cds-STY7866_RS18570;Parent=gene-STY7866_RS18570;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=greA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=STY7866_RS18570;partial=true;product=transcription elongation factor GreA;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000531.1	RefSeq	gene	302	595	.	-	.	ID=gene-STY7866_RS18575;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=STY7866_RS18575
NZ_CAAR01000531.1	Protein Homology	CDS	302	595	.	-	0	ID=cds-WP_001592995.1;Parent=gene-STY7866_RS18575;Dbxref=Genbank:WP_001592995.1;Name=WP_001592995.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=STY7866_RS18575;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001592995.1;transl_table=11
NZ_CAAR01000531.1	RefSeq	pseudogene	722	1106	.	+	.	ID=gene-STY7866_RS18580;Name=STY7866_RS18580;end_range=1106,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18580;partial=true;pseudo=true
NZ_CAAR01000531.1	Protein Homology	CDS	722	1106	.	+	0	ID=cds-STY7866_RS18580;Parent=gene-STY7866_RS18580;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1106,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312085.1;locus_tag=STY7866_RS18580;partial=true;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000530.1 1 2906
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000530.1	RefSeq	region	1	2906	.	+	.	ID=NZ_CAAR01000530.1:1..2906;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000530.1	RefSeq	gene	1	903	.	+	.	ID=gene-STY7866_RS18560;Name=STY7866_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18560;partial=true;start_range=.,1
NZ_CAAR01000530.1	Protein Homology	CDS	1	903	.	+	0	ID=cds-WP_000625517.1;Parent=gene-STY7866_RS18560;Dbxref=Genbank:WP_000625517.1;Name=WP_000625517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457388.1;locus_tag=STY7866_RS18560;partial=true;product=peptidase M16;protein_id=WP_000625517.1;start_range=.,1;transl_table=11
NZ_CAAR01000530.1	RefSeq	gene	896	2906	.	+	.	ID=gene-STY7866_RS18565;Name=recB;end_range=2906,.;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=STY7866_RS18565;partial=true
NZ_CAAR01000530.1	Protein Homology	CDS	896	2906	.	+	0	ID=cds-WP_001000526.1;Parent=gene-STY7866_RS18565;Dbxref=Genbank:WP_001000526.1;Name=WP_001000526.1;end_range=2906,.;gbkey=CDS;gene=recB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457387.1;locus_tag=STY7866_RS18565;partial=true;product=exodeoxyribonuclease V subunit beta;protein_id=WP_001000526.1;transl_table=11
##sequence-region NZ_CAAR01000529.1 1 2730
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000529.1	RefSeq	region	1	2730	.	+	.	ID=NZ_CAAR01000529.1:1..2730;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000529.1	RefSeq	gene	1	660	.	+	.	ID=gene-STY7866_RS18545;Name=STY7866_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18545;partial=true;start_range=.,1
NZ_CAAR01000529.1	Protein Homology	CDS	1	660	.	+	0	ID=cds-WP_000329622.1;Parent=gene-STY7866_RS18545;Dbxref=Genbank:WP_000329622.1;Name=WP_000329622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455279.1;locus_tag=STY7866_RS18545;partial=true;product=glycosyltransferase family 2 protein;protein_id=WP_000329622.1;start_range=.,1;transl_table=11
NZ_CAAR01000529.1	RefSeq	pseudogene	673	1807	.	+	.	ID=gene-STY7866_RS18550;Name=STY7866_RS18550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18550;pseudo=true
NZ_CAAR01000529.1	Protein Homology	CDS	673	1807	.	+	0	ID=cds-STY7866_RS18550;Parent=gene-STY7866_RS18550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455280.1;locus_tag=STY7866_RS18550;product=glycosyltransferase family 4 protein;pseudo=true;transl_table=11
NZ_CAAR01000529.1	RefSeq	pseudogene	1936	2705	.	+	.	ID=gene-STY7866_RS18555;Name=STY7866_RS18555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18555;pseudo=true
NZ_CAAR01000529.1	Protein Homology	CDS	1936	2705	.	+	0	ID=cds-STY7866_RS18555;Parent=gene-STY7866_RS18555;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459707.1;locus_tag=STY7866_RS18555;product=ABC transporter permease;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000528.1 1 6487
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000528.1	RefSeq	region	1	6487	.	+	.	ID=NZ_CAAR01000528.1:1..6487;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000528.1	RefSeq	pseudogene	1	159	.	+	.	ID=gene-STY7866_RS27690;Name=STY7866_RS27690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27690;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000528.1	Protein Homology	CDS	1	159	.	+	0	ID=cds-STY7866_RS27690;Parent=gene-STY7866_RS27690;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=STY7866_RS27690;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000528.1	RefSeq	gene	170	634	.	+	.	ID=gene-STY7866_RS18510;Name=STY7866_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18510
NZ_CAAR01000528.1	Protein Homology	CDS	170	634	.	+	0	ID=cds-WP_001521985.1;Parent=gene-STY7866_RS18510;Dbxref=Genbank:WP_001521985.1;Name=WP_001521985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458173.1;locus_tag=STY7866_RS18510;product=hypothetical protein;protein_id=WP_001521985.1;transl_table=11
NZ_CAAR01000528.1	RefSeq	pseudogene	729	3598	.	-	.	ID=gene-STY7866_RS18515;Name=misL;gbkey=Gene;gene=misL;gene_biotype=pseudogene;locus_tag=STY7866_RS18515;pseudo=true
NZ_CAAR01000528.1	Protein Homology	CDS	729	3598	.	-	0	ID=cds-STY7866_RS18515;Parent=gene-STY7866_RS18515;Note=frameshifted;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=STY7866_RS18515;product=intestinal colonization autotransporter adhesin MisL;pseudo=true;transl_table=11
NZ_CAAR01000528.1	RefSeq	gene	3673	4290	.	-	.	ID=gene-STY7866_RS18520;Name=STY7866_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18520
NZ_CAAR01000528.1	Protein Homology	CDS	3673	4290	.	-	0	ID=cds-WP_000984810.1;Parent=gene-STY7866_RS18520;Dbxref=Genbank:WP_000984810.1;Name=WP_000984810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458174.1;locus_tag=STY7866_RS18520;product=helix-turn-helix transcriptional regulator;protein_id=WP_000984810.1;transl_table=11
NZ_CAAR01000528.1	RefSeq	pseudogene	5566	5691	.	+	.	ID=gene-STY7866_RS18535;Name=STY7866_RS18535;end_range=5691,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18535;partial=true;pseudo=true
NZ_CAAR01000528.1	Protein Homology	CDS	5566	5691	.	+	0	ID=cds-STY7866_RS18535;Parent=gene-STY7866_RS18535;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5691,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611209.1;locus_tag=STY7866_RS18535;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_CAAR01000528.1	RefSeq	pseudogene	6007	6487	.	-	.	ID=gene-STY7866_RS18540;Name=STY7866_RS18540;end_range=6487,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18540;partial=true;pseudo=true
NZ_CAAR01000528.1	Protein Homology	CDS	6007	6487	.	-	1	ID=cds-STY7866_RS18540;Parent=gene-STY7866_RS18540;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6487,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462654.1;locus_tag=STY7866_RS18540;partial=true;product=hydroxyacid dehydrogenase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000527.1 1 1894
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000527.1	RefSeq	region	1	1894	.	+	.	ID=NZ_CAAR01000527.1:1..1894;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000527.1	RefSeq	gene	1	635	.	-	.	ID=gene-STY7866_RS18490;Name=STY7866_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18490;partial=true;start_range=.,1
NZ_CAAR01000527.1	Protein Homology	CDS	1	635	.	-	0	ID=cds-WP_001764877.1;Parent=gene-STY7866_RS18490;Dbxref=Genbank:WP_001764877.1;Name=WP_001764877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458232.1;locus_tag=STY7866_RS18490;partial=true;product=L-lactate dehydrogenase;protein_id=WP_001764877.1;start_range=.,1;transl_table=11
NZ_CAAR01000527.1	RefSeq	gene	632	1408	.	-	.	ID=gene-STY7866_RS18495;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=STY7866_RS18495
NZ_CAAR01000527.1	Protein Homology	CDS	632	1408	.	-	0	ID=cds-WP_000636695.1;Parent=gene-STY7866_RS18495;Dbxref=Genbank:WP_000636695.1;Name=WP_000636695.1;gbkey=CDS;gene=lldR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458233.1;locus_tag=STY7866_RS18495;product=transcriptional regulator LldR;protein_id=WP_000636695.1;transl_table=11
NZ_CAAR01000527.1	RefSeq	pseudogene	1405	1894	.	-	.	ID=gene-STY7866_RS18500;Name=STY7866_RS18500;end_range=1894,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18500;partial=true;pseudo=true
NZ_CAAR01000527.1	Protein Homology	CDS	1405	1894	.	-	1	ID=cds-STY7866_RS18500;Parent=gene-STY7866_RS18500;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1894,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458234.1;locus_tag=STY7866_RS18500;partial=true;product=L-lactate permease;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000526.1 1 1313
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000526.1	RefSeq	region	1	1313	.	+	.	ID=NZ_CAAR01000526.1:1..1313;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000526.1	RefSeq	gene	1	1313	.	-	.	ID=gene-STY7866_RS18485;Name=STY7866_RS18485;end_range=1313,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18485;partial=true;start_range=.,1
NZ_CAAR01000526.1	Protein Homology	CDS	1	1313	.	-	2	ID=cds-WP_000396314.1;Parent=gene-STY7866_RS18485;Dbxref=Genbank:WP_000396314.1;Name=WP_000396314.1;end_range=1313,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455088.1;locus_tag=STY7866_RS18485;partial=true;product=Kef family K(+) transporter;protein_id=WP_000396314.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000525.1 1 833
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000525.1	RefSeq	region	1	833	.	+	.	ID=NZ_CAAR01000525.1:1..833;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000525.1	RefSeq	pseudogene	1	225	.	-	.	ID=gene-STY7866_RS27685;Name=STY7866_RS27685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27685;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000525.1	Protein Homology	CDS	1	225	.	-	0	ID=cds-STY7866_RS27685;Parent=gene-STY7866_RS27685;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457901.1;locus_tag=STY7866_RS27685;partial=true;product=sensor protein ZraS;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000525.1	RefSeq	gene	479	833	.	+	.	ID=gene-STY7866_RS18480;Name=zraP;end_range=833,.;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=STY7866_RS18480;partial=true
NZ_CAAR01000525.1	Protein Homology	CDS	479	833	.	+	0	ID=cds-WP_000828137.1;Parent=gene-STY7866_RS18480;Dbxref=Genbank:WP_000828137.1;Name=WP_000828137.1;end_range=833,.;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457902.1;locus_tag=STY7866_RS18480;partial=true;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828137.1;transl_table=11
##sequence-region NZ_CAAR01000524.1 1 13038
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000524.1	RefSeq	region	1	13038	.	+	.	ID=NZ_CAAR01000524.1:1..13038;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000524.1	RefSeq	pseudogene	1	67	.	-	.	ID=gene-STY7866_RS27670;Name=STY7866_RS27670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27670;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000524.1	Protein Homology	CDS	1	67	.	-	0	ID=cds-STY7866_RS27670;Parent=gene-STY7866_RS27670;Note=SodC%3B copper and zinc binding%3B converts superoxide radicals to hydrogen peroxide and water%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456090.1;locus_tag=STY7866_RS27670;partial=true;product=superoxide dismutase [Cu-Zn] SodC2;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000524.1	RefSeq	gene	147	1043	.	-	.	ID=gene-STY7866_RS18395;Name=STY7866_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18395
NZ_CAAR01000524.1	Protein Homology	CDS	147	1043	.	-	0	ID=cds-WP_000250718.1;Parent=gene-STY7866_RS18395;Dbxref=Genbank:WP_000250718.1;Name=WP_000250718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456091.1;locus_tag=STY7866_RS18395;product=aldo/keto reductase family oxidoreductase;protein_id=WP_000250718.1;transl_table=11
NZ_CAAR01000524.1	RefSeq	gene	1094	1333	.	-	.	ID=gene-STY7866_RS18400;Name=STY7866_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18400
NZ_CAAR01000524.1	Protein Homology	CDS	1094	1333	.	-	0	ID=cds-WP_001538148.1;Parent=gene-STY7866_RS18400;Dbxref=Genbank:WP_001538148.1;Name=WP_001538148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456092.1;locus_tag=STY7866_RS18400;product=DUF1289 domain-containing protein;protein_id=WP_001538148.1;transl_table=11
NZ_CAAR01000524.1	RefSeq	gene	1436	2035	.	+	.	ID=gene-STY7866_RS18405;Name=STY7866_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18405
NZ_CAAR01000524.1	Protein Homology	CDS	1436	2035	.	+	0	ID=cds-WP_001041823.1;Parent=gene-STY7866_RS18405;Dbxref=Genbank:WP_001041823.1;Name=WP_001041823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456093.1;locus_tag=STY7866_RS18405;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001041823.1;transl_table=11
NZ_CAAR01000524.1	RefSeq	gene	2094	3191	.	+	.	ID=gene-STY7866_RS18410;Name=STY7866_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18410
NZ_CAAR01000524.1	Protein Homology	CDS	2094	3191	.	+	0	ID=cds-WP_000092935.1;Parent=gene-STY7866_RS18410;Dbxref=Genbank:WP_000092935.1;Name=WP_000092935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456094.1;locus_tag=STY7866_RS18410;product=alkene reductase;protein_id=WP_000092935.1;transl_table=11
NZ_CAAR01000524.1	RefSeq	gene	3260	3667	.	+	.	ID=gene-STY7866_RS18415;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=STY7866_RS18415
NZ_CAAR01000524.1	Protein Homology	CDS	3260	3667	.	+	0	ID=cds-WP_001237787.1;Parent=gene-STY7866_RS18415;Dbxref=Genbank:WP_001237787.1;Name=WP_001237787.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=STY7866_RS18415;product=lactoylglutathione lyase;protein_id=WP_001237787.1;transl_table=11
NZ_CAAR01000524.1	RefSeq	pseudogene	3768	4416	.	+	.	ID=gene-STY7866_RS18420;Name=STY7866_RS18420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18420;pseudo=true
NZ_CAAR01000524.1	Protein Homology	CDS	3768	4416	.	+	0	ID=cds-STY7866_RS18420;Parent=gene-STY7866_RS18420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456096.1;locus_tag=STY7866_RS18420;product=ribonuclease T;pseudo=true;transl_table=11
NZ_CAAR01000524.1	RefSeq	gene	4364	4543	.	+	.	ID=gene-STY7866_RS27675;Name=STY7866_RS27675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27675
NZ_CAAR01000524.1	Protein Homology	CDS	4364	4543	.	+	0	ID=cds-WP_072073178.1;Parent=gene-STY7866_RS27675;Dbxref=Genbank:WP_072073178.1;Name=WP_072073178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001611799.1;locus_tag=STY7866_RS27675;product=hypothetical protein;protein_id=WP_072073178.1;transl_table=11
NZ_CAAR01000524.1	RefSeq	gene	4494	4841	.	-	.	ID=gene-STY7866_RS18425;Name=STY7866_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18425
NZ_CAAR01000524.1	Protein Homology	CDS	4494	4841	.	-	0	ID=cds-WP_000108176.1;Parent=gene-STY7866_RS18425;Dbxref=Genbank:WP_000108176.1;Name=WP_000108176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456097.1;locus_tag=STY7866_RS18425;product=monothiol glutaredoxin 4;protein_id=WP_000108176.1;transl_table=11
NZ_CAAR01000524.1	RefSeq	pseudogene	5143	5996	.	+	.	ID=gene-STY7866_RS18430;Name=STY7866_RS18430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18430;pseudo=true
NZ_CAAR01000524.1	Protein Homology	CDS	5143	5996	.	+	0	ID=cds-STY7866_RS18430;Parent=gene-STY7866_RS18430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456098.1;locus_tag=STY7866_RS18430;product=NlpC/P60 family protein;pseudo=true;transl_table=11
NZ_CAAR01000524.1	RefSeq	gene	6123	6704	.	+	.	ID=gene-STY7866_RS18435;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=STY7866_RS18435
NZ_CAAR01000524.1	Protein Homology	CDS	6123	6704	.	+	0	ID=cds-WP_000007299.1;Parent=gene-STY7866_RS18435;Dbxref=Genbank:WP_000007299.1;Name=WP_000007299.1;gbkey=CDS;gene=sodB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456099.1;locus_tag=STY7866_RS18435;product=superoxide dismutase [Fe];protein_id=WP_000007299.1;transl_table=11
NZ_CAAR01000524.1	RefSeq	gene	6787	6876	.	-	.	ID=gene-STY7866_RS27680;Name=ynhF;gbkey=Gene;gene=ynhF;gene_biotype=protein_coding;locus_tag=STY7866_RS27680
NZ_CAAR01000524.1	Protein Homology	CDS	6787	6876	.	-	0	ID=cds-WP_000102277.1;Parent=gene-STY7866_RS27680;Dbxref=Genbank:WP_000102277.1;Name=WP_000102277.1;gbkey=CDS;gene=ynhF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=STY7866_RS27680;product=YnhF family membrane protein;protein_id=WP_000102277.1;transl_table=11
NZ_CAAR01000524.1	RefSeq	gene	7172	8197	.	+	.	ID=gene-STY7866_RS18445;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=STY7866_RS18445
NZ_CAAR01000524.1	Protein Homology	CDS	7172	8197	.	+	0	ID=cds-WP_000190992.1;Parent=gene-STY7866_RS18445;Dbxref=Genbank:WP_000190992.1;Name=WP_000190992.1;gbkey=CDS;gene=purR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=STY7866_RS18445;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190992.1;transl_table=11
NZ_CAAR01000524.1	RefSeq	gene	8194	9126	.	-	.	ID=gene-STY7866_RS18450;Name=STY7866_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18450
NZ_CAAR01000524.1	Protein Homology	CDS	8194	9126	.	-	0	ID=cds-WP_000269523.1;Parent=gene-STY7866_RS18450;Dbxref=Genbank:WP_000269523.1;Name=WP_000269523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=STY7866_RS18450;product=LysR family transcriptional regulator;protein_id=WP_000269523.1;transl_table=11
NZ_CAAR01000524.1	RefSeq	gene	9239	10444	.	+	.	ID=gene-STY7866_RS18455;Name=STY7866_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18455
NZ_CAAR01000524.1	Protein Homology	CDS	9239	10444	.	+	0	ID=cds-WP_001182326.1;Parent=gene-STY7866_RS18455;Dbxref=Genbank:WP_001182326.1;Name=WP_001182326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456102.1;locus_tag=STY7866_RS18455;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_001182326.1;transl_table=11
NZ_CAAR01000524.1	RefSeq	pseudogene	10733	11882	.	+	.	ID=gene-STY7866_RS18460;Name=STY7866_RS18460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18460;pseudo=true
NZ_CAAR01000524.1	Protein Homology	CDS	10733	11882	.	+	0	ID=cds-STY7866_RS18460;Parent=gene-STY7866_RS18460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456103.1;locus_tag=STY7866_RS18460;product=cyclopropane fatty acyl phospholipid synthase;pseudo=true;transl_table=11
NZ_CAAR01000524.1	RefSeq	gene	11924	12565	.	-	.	ID=gene-STY7866_RS18465;Name=STY7866_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18465
NZ_CAAR01000524.1	Protein Homology	CDS	11924	12565	.	-	0	ID=cds-WP_000493973.1;Parent=gene-STY7866_RS18465;Dbxref=Genbank:WP_000493973.1;Name=WP_000493973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456104.1;locus_tag=STY7866_RS18465;product=riboflavin synthase;protein_id=WP_000493973.1;transl_table=11
NZ_CAAR01000524.1	RefSeq	pseudogene	12782	13038	.	+	.	ID=gene-STY7866_RS18470;Name=STY7866_RS18470;end_range=13038,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18470;partial=true;pseudo=true
NZ_CAAR01000524.1	Protein Homology	CDS	12782	13038	.	+	0	ID=cds-STY7866_RS18470;Parent=gene-STY7866_RS18470;Note=NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=13038,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456105.1;locus_tag=STY7866_RS18470;partial=true;product=MATE family efflux transporter;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000523.1 1 6771
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000523.1	RefSeq	region	1	6771	.	+	.	ID=NZ_CAAR01000523.1:1..6771;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000523.1	RefSeq	gene	1	785	.	-	.	ID=gene-STY7866_RS18335;Name=STY7866_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18335;partial=true;start_range=.,1
NZ_CAAR01000523.1	Protein Homology	CDS	1	785	.	-	0	ID=cds-WP_000881532.1;Parent=gene-STY7866_RS18335;Dbxref=Genbank:WP_000881532.1;Name=WP_000881532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456574.1;locus_tag=STY7866_RS18335;partial=true;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000881532.1;start_range=.,1;transl_table=11
NZ_CAAR01000523.1	RefSeq	gene	794	1471	.	-	.	ID=gene-STY7866_RS18340;Name=STY7866_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18340
NZ_CAAR01000523.1	Protein Homology	CDS	794	1471	.	-	0	ID=cds-WP_000147138.1;Parent=gene-STY7866_RS18340;Dbxref=Genbank:WP_000147138.1;Name=WP_000147138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456575.1;locus_tag=STY7866_RS18340;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_000147138.1;transl_table=11
NZ_CAAR01000523.1	RefSeq	gene	1458	1739	.	-	.	ID=gene-STY7866_RS18345;Name=STY7866_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18345
NZ_CAAR01000523.1	Protein Homology	CDS	1458	1739	.	-	0	ID=cds-WP_000753216.1;Parent=gene-STY7866_RS18345;Dbxref=Genbank:WP_000753216.1;Name=WP_000753216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456576.1;locus_tag=STY7866_RS18345;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_000753216.1;transl_table=11
NZ_CAAR01000523.1	RefSeq	pseudogene	1741	2477	.	-	.	ID=gene-STY7866_RS18350;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=pseudogene;locus_tag=STY7866_RS18350;pseudo=true
NZ_CAAR01000523.1	Protein Homology	CDS	1741	2477	.	-	0	ID=cds-STY7866_RS18350;Parent=gene-STY7866_RS18350;Note=frameshifted;gbkey=CDS;gene=cbiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=STY7866_RS18350;product=cobalt ECF transporter S component CbiM;pseudo=true;transl_table=11
NZ_CAAR01000523.1	RefSeq	gene	2474	3187	.	-	.	ID=gene-STY7866_RS18355;Name=STY7866_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18355
NZ_CAAR01000523.1	Protein Homology	CDS	2474	3187	.	-	0	ID=cds-WP_001013551.1;Parent=gene-STY7866_RS18355;Dbxref=Genbank:WP_001013551.1;Name=WP_001013551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456577.1;locus_tag=STY7866_RS18355;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_001013551.1;transl_table=11
NZ_CAAR01000523.1	RefSeq	gene	3184	3912	.	-	.	ID=gene-STY7866_RS18360;Name=STY7866_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18360
NZ_CAAR01000523.1	Protein Homology	CDS	3184	3912	.	-	0	ID=cds-WP_071524988.1;Parent=gene-STY7866_RS18360;Dbxref=Genbank:WP_071524988.1;Name=WP_071524988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001726449.1;locus_tag=STY7866_RS18360;product=sirohydrochlorin cobaltochelatase;protein_id=WP_071524988.1;transl_table=11
NZ_CAAR01000523.1	RefSeq	gene	4057	4770	.	-	.	ID=gene-STY7866_RS18370;Name=STY7866_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18370
NZ_CAAR01000523.1	Protein Homology	CDS	4057	4770	.	-	0	ID=cds-WP_001764873.1;Parent=gene-STY7866_RS18370;Dbxref=Genbank:WP_001764873.1;Name=WP_001764873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341329.1;locus_tag=STY7866_RS18370;product=cobalt-precorrin-6A reductase;protein_id=WP_001764873.1;transl_table=11
NZ_CAAR01000523.1	RefSeq	gene	4767	5492	.	-	.	ID=gene-STY7866_RS18375;Name=STY7866_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18375
NZ_CAAR01000523.1	Protein Homology	CDS	4767	5492	.	-	0	ID=cds-WP_000953643.1;Parent=gene-STY7866_RS18375;Dbxref=Genbank:WP_000953643.1;Name=WP_000953643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456578.1;locus_tag=STY7866_RS18375;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_000953643.1;transl_table=11
NZ_CAAR01000523.1	RefSeq	gene	5492	6547	.	-	.	ID=gene-STY7866_RS18380;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=STY7866_RS18380
NZ_CAAR01000523.1	Protein Homology	CDS	5492	6547	.	-	0	ID=cds-WP_001098913.1;Parent=gene-STY7866_RS18380;Dbxref=Genbank:WP_001098913.1;Name=WP_001098913.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456579.1;locus_tag=STY7866_RS18380;product=cobalt-precorrin 5A hydrolase;protein_id=WP_001098913.1;transl_table=11
NZ_CAAR01000523.1	RefSeq	pseudogene	6528	6771	.	-	.	ID=gene-STY7866_RS18385;Name=cbiF;end_range=6771,.;gbkey=Gene;gene=cbiF;gene_biotype=pseudogene;locus_tag=STY7866_RS18385;partial=true;pseudo=true
NZ_CAAR01000523.1	Protein Homology	CDS	6528	6771	.	-	1	ID=cds-STY7866_RS18385;Parent=gene-STY7866_RS18385;Note=catalyzes the formation of cobalt-precorrin-5 from cobalt-precorrin-4%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6771,.;gbkey=CDS;gene=cbiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456580.1;locus_tag=STY7866_RS18385;partial=true;product=cobalt-precorrin-4 C(11)-methyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000522.1 1 2293
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000522.1	RefSeq	region	1	2293	.	+	.	ID=NZ_CAAR01000522.1:1..2293;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000522.1	RefSeq	gene	1	821	.	+	.	ID=gene-STY7866_RS18320;Name=STY7866_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18320;partial=true;start_range=.,1
NZ_CAAR01000522.1	Protein Homology	CDS	1	821	.	+	2	ID=cds-WP_000629904.1;Parent=gene-STY7866_RS18320;Dbxref=Genbank:WP_000629904.1;Name=WP_000629904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455721.1;locus_tag=STY7866_RS18320;partial=true;product=cupin domain-containing protein;protein_id=WP_000629904.1;start_range=.,1;transl_table=11
NZ_CAAR01000522.1	RefSeq	gene	861	2195	.	-	.	ID=gene-STY7866_RS18325;Name=STY7866_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18325
NZ_CAAR01000522.1	Protein Homology	CDS	861	2195	.	-	0	ID=cds-WP_000902462.1;Parent=gene-STY7866_RS18325;Dbxref=Genbank:WP_000902462.1;Name=WP_000902462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455720.1;locus_tag=STY7866_RS18325;product=hypothetical protein;protein_id=WP_000902462.1;transl_table=11
##sequence-region NZ_CAAR01000521.1 1 638
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000521.1	RefSeq	region	1	638	.	+	.	ID=NZ_CAAR01000521.1:1..638;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000521.1	RefSeq	pseudogene	126	638	.	+	.	ID=gene-STY7866_RS18315;Name=STY7866_RS18315;end_range=638,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18315;partial=true;pseudo=true
NZ_CAAR01000521.1	Protein Homology	CDS	126	638	.	+	0	ID=cds-STY7866_RS18315;Parent=gene-STY7866_RS18315;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=638,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458229.1;locus_tag=STY7866_RS18315;partial=true;product=L-talarate/galactarate dehydratase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000520.1 1 6850
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000520.1	RefSeq	region	1	6850	.	+	.	ID=NZ_CAAR01000520.1:1..6850;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000520.1	RefSeq	gene	1	1029	.	-	.	ID=gene-STY7866_RS18285;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=STY7866_RS18285;partial=true;start_range=.,1
NZ_CAAR01000520.1	Protein Homology	CDS	1	1029	.	-	0	ID=cds-WP_000759328.1;Parent=gene-STY7866_RS18285;Dbxref=Genbank:WP_000759328.1;Name=WP_000759328.1;gbkey=CDS;gene=potD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=STY7866_RS18285;partial=true;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759328.1;start_range=.,1;transl_table=11
NZ_CAAR01000520.1	RefSeq	gene	1054	1833	.	-	.	ID=gene-STY7866_RS18290;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=STY7866_RS18290
NZ_CAAR01000520.1	Protein Homology	CDS	1054	1833	.	-	0	ID=cds-WP_000580299.1;Parent=gene-STY7866_RS18290;Dbxref=Genbank:WP_000580299.1;Name=WP_000580299.1;gbkey=CDS;gene=potC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455715.1;locus_tag=STY7866_RS18290;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580299.1;transl_table=11
NZ_CAAR01000520.1	RefSeq	gene	2149	3159	.	-	.	ID=gene-STY7866_RS18295;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=STY7866_RS18295
NZ_CAAR01000520.1	Protein Homology	CDS	2149	3159	.	-	0	ID=cds-WP_001764868.1;Parent=gene-STY7866_RS18295;Dbxref=Genbank:WP_001764868.1;Name=WP_001764868.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455716.1;locus_tag=STY7866_RS18295;product=SPI-2 type III secretion system effector SifA;protein_id=WP_001764868.1;transl_table=11
NZ_CAAR01000520.1	RefSeq	gene	3488	4351	.	-	.	ID=gene-STY7866_RS18300;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=STY7866_RS18300
NZ_CAAR01000520.1	Protein Homology	CDS	3488	4351	.	-	0	ID=cds-WP_000799391.1;Parent=gene-STY7866_RS18300;Dbxref=Genbank:WP_000799391.1;Name=WP_000799391.1;gbkey=CDS;gene=potB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455717.1;locus_tag=STY7866_RS18300;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799391.1;transl_table=11
NZ_CAAR01000520.1	RefSeq	gene	4335	5471	.	-	.	ID=gene-STY7866_RS18305;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=STY7866_RS18305
NZ_CAAR01000520.1	Protein Homology	CDS	4335	5471	.	-	0	ID=cds-WP_000531581.1;Parent=gene-STY7866_RS18305;Dbxref=Genbank:WP_000531581.1;Name=WP_000531581.1;gbkey=CDS;gene=potA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455718.1;locus_tag=STY7866_RS18305;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531581.1;transl_table=11
NZ_CAAR01000520.1	RefSeq	gene	5722	6850	.	+	.	ID=gene-STY7866_RS18310;Name=pepT;end_range=6850,.;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=STY7866_RS18310;partial=true
NZ_CAAR01000520.1	Protein Homology	CDS	5722	6850	.	+	0	ID=cds-WP_000359417.1;Parent=gene-STY7866_RS18310;Dbxref=Genbank:WP_000359417.1;Name=WP_000359417.1;end_range=6850,.;gbkey=CDS;gene=pepT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455719.1;locus_tag=STY7866_RS18310;partial=true;product=peptidase T;protein_id=WP_000359417.1;transl_table=11
##sequence-region NZ_CAAR01000519.1 1 3105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000519.1	RefSeq	region	1	3105	.	+	.	ID=NZ_CAAR01000519.1:1..3105;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000519.1	RefSeq	gene	1	322	.	+	.	ID=gene-STY7866_RS18265;Name=STY7866_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18265;partial=true;start_range=.,1
NZ_CAAR01000519.1	Protein Homology	CDS	1	322	.	+	1	ID=cds-WP_000696882.1;Parent=gene-STY7866_RS18265;Dbxref=Genbank:WP_000696882.1;Name=WP_000696882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458964.1;locus_tag=STY7866_RS18265;partial=true;product=YbaK/EbsC family protein;protein_id=WP_000696882.1;start_range=.,1;transl_table=11
NZ_CAAR01000519.1	RefSeq	gene	373	1047	.	-	.	ID=gene-STY7866_RS18270;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=STY7866_RS18270
NZ_CAAR01000519.1	Protein Homology	CDS	373	1047	.	-	0	ID=cds-WP_000431546.1;Parent=gene-STY7866_RS18270;Dbxref=Genbank:WP_000431546.1;Name=WP_000431546.1;gbkey=CDS;gene=bglJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=STY7866_RS18270;product=DNA-binding transcriptional activator BglJ;protein_id=WP_000431546.1;transl_table=11
NZ_CAAR01000519.1	RefSeq	gene	1008	1733	.	-	.	ID=gene-STY7866_RS18275;Name=STY7866_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18275
NZ_CAAR01000519.1	Protein Homology	CDS	1008	1733	.	-	0	ID=cds-WP_000936654.1;Parent=gene-STY7866_RS18275;Dbxref=Genbank:WP_000936654.1;Name=WP_000936654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458962.1;locus_tag=STY7866_RS18275;product=response regulator transcription factor;protein_id=WP_000936654.1;transl_table=11
NZ_CAAR01000519.1	RefSeq	gene	2446	3105	.	+	.	ID=gene-STY7866_RS18280;Name=STY7866_RS18280;end_range=3105,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18280;partial=true
NZ_CAAR01000519.1	Protein Homology	CDS	2446	3105	.	+	0	ID=cds-WP_024151096.1;Parent=gene-STY7866_RS18280;Dbxref=Genbank:WP_024151096.1;Name=WP_024151096.1;end_range=3105,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=STY7866_RS18280;partial=true;product=threonine/serine exporter ThrE family protein;protein_id=WP_024151096.1;transl_table=11
##sequence-region NZ_CAAR01000518.1 1 1719
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000518.1	RefSeq	region	1	1719	.	+	.	ID=NZ_CAAR01000518.1:1..1719;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000518.1	RefSeq	gene	1	864	.	+	.	ID=gene-STY7866_RS18250;Name=STY7866_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18250;partial=true;start_range=.,1
NZ_CAAR01000518.1	Protein Homology	CDS	1	864	.	+	0	ID=cds-WP_000313596.1;Parent=gene-STY7866_RS18250;Dbxref=Genbank:WP_000313596.1;Name=WP_000313596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455162.1;locus_tag=STY7866_RS18250;partial=true;product=TonB-dependent receptor;protein_id=WP_000313596.1;start_range=.,1;transl_table=11
NZ_CAAR01000518.1	RefSeq	gene	911	1615	.	+	.	ID=gene-STY7866_RS18255;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=STY7866_RS18255
NZ_CAAR01000518.1	Protein Homology	CDS	911	1615	.	+	0	ID=cds-WP_001681620.1;Parent=gene-STY7866_RS18255;Dbxref=Genbank:WP_001681620.1;Name=WP_001681620.1;gbkey=CDS;gene=entD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455161.1;locus_tag=STY7866_RS18255;product=enterobactin synthase subunit EntD;protein_id=WP_001681620.1;transl_table=11
##sequence-region NZ_CAAR01000517.1 1 1841
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000517.1	RefSeq	region	1	1841	.	+	.	ID=NZ_CAAR01000517.1:1..1841;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000517.1	RefSeq	gene	1	313	.	-	.	ID=gene-STY7866_RS18230;Name=STY7866_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18230;partial=true;start_range=.,1
NZ_CAAR01000517.1	Protein Homology	CDS	1	313	.	-	0	ID=cds-WP_000093123.1;Parent=gene-STY7866_RS18230;Dbxref=Genbank:WP_000093123.1;Name=WP_000093123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458593.1;locus_tag=STY7866_RS18230;partial=true;product=amino acid permease;protein_id=WP_000093123.1;start_range=.,1;transl_table=11
NZ_CAAR01000517.1	RefSeq	gene	453	1214	.	-	.	ID=gene-STY7866_RS18235;Name=STY7866_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18235
NZ_CAAR01000517.1	Protein Homology	CDS	453	1214	.	-	0	ID=cds-WP_001217076.1;Parent=gene-STY7866_RS18235;Dbxref=Genbank:WP_001217076.1;Name=WP_001217076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458594.1;locus_tag=STY7866_RS18235;product=helix-turn-helix domain-containing protein;protein_id=WP_001217076.1;transl_table=11
NZ_CAAR01000517.1	RefSeq	pseudogene	1511	1841	.	-	.	ID=gene-STY7866_RS18245;Name=STY7866_RS18245;end_range=1841,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18245;partial=true;pseudo=true
NZ_CAAR01000517.1	Protein Homology	CDS	1511	1841	.	-	1	ID=cds-STY7866_RS18245;Parent=gene-STY7866_RS18245;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1841,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418541.2;locus_tag=STY7866_RS18245;partial=true;product=amino acid decarboxylase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000516.1 1 2249
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000516.1	RefSeq	region	1	2249	.	+	.	ID=NZ_CAAR01000516.1:1..2249;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000516.1	RefSeq	gene	74	2249	.	+	.	ID=gene-STY7866_RS18225;Name=torS;end_range=2249,.;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=STY7866_RS18225;partial=true
NZ_CAAR01000516.1	Protein Homology	CDS	74	2249	.	+	0	ID=cds-WP_000106931.1;Parent=gene-STY7866_RS18225;Dbxref=Genbank:WP_000106931.1;Name=WP_000106931.1;end_range=2249,.;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458115.1;locus_tag=STY7866_RS18225;partial=true;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_000106931.1;transl_table=11
##sequence-region NZ_CAAR01000515.1 1 265
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000515.1	RefSeq	region	1	265	.	+	.	ID=NZ_CAAR01000515.1:1..265;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000515.1	RefSeq	pseudogene	1	185	.	+	.	ID=gene-STY7866_RS27665;Name=STY7866_RS27665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27665;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000515.1	Protein Homology	CDS	1	185	.	+	2	ID=cds-STY7866_RS27665;Parent=gene-STY7866_RS27665;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416853.1;locus_tag=STY7866_RS27665;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000514.1 1 1602
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000514.1	RefSeq	region	1	1602	.	+	.	ID=NZ_CAAR01000514.1:1..1602;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000514.1	RefSeq	pseudogene	1	519	.	+	.	ID=gene-STY7866_RS18210;Name=tas;gbkey=Gene;gene=tas;gene_biotype=pseudogene;locus_tag=STY7866_RS18210;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000514.1	Protein Homology	CDS	1	519	.	+	0	ID=cds-STY7866_RS18210;Parent=gene-STY7866_RS18210;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=tas;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527995.1;locus_tag=STY7866_RS18210;partial=true;product=NADP(H)-dependent aldo-keto reductase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000514.1	RefSeq	gene	606	1602	.	-	.	ID=gene-STY7866_RS18215;Name=lplT;end_range=1602,.;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=STY7866_RS18215;partial=true
NZ_CAAR01000514.1	Protein Homology	CDS	606	1602	.	-	1	ID=cds-WP_000474124.1;Parent=gene-STY7866_RS18215;Dbxref=Genbank:WP_000474124.1;Name=WP_000474124.1;end_range=1602,.;gbkey=CDS;gene=lplT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457403.1;locus_tag=STY7866_RS18215;partial=true;product=lysophospholipid transporter LplT;protein_id=WP_000474124.1;transl_table=11
##sequence-region NZ_CAAR01000513.1 1 1883
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000513.1	RefSeq	region	1	1883	.	+	.	ID=NZ_CAAR01000513.1:1..1883;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000513.1	RefSeq	gene	1	1321	.	+	.	ID=gene-STY7866_RS18200;Name=STY7866_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18200;partial=true;start_range=.,1
NZ_CAAR01000513.1	Protein Homology	CDS	1	1321	.	+	1	ID=cds-WP_000297786.1;Parent=gene-STY7866_RS18200;Dbxref=Genbank:WP_000297786.1;Name=WP_000297786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458241.1;locus_tag=STY7866_RS18200;partial=true;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000297786.1;start_range=.,1;transl_table=11
NZ_CAAR01000513.1	RefSeq	pseudogene	1542	1883	.	+	.	ID=gene-STY7866_RS18205;Name=STY7866_RS18205;end_range=1883,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18205;partial=true;pseudo=true
NZ_CAAR01000513.1	Protein Homology	CDS	1542	1883	.	+	0	ID=cds-STY7866_RS18205;Parent=gene-STY7866_RS18205;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1883,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458240.1;locus_tag=STY7866_RS18205;partial=true;product=mannitol-1-phosphate 5-dehydrogenase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000512.1 1 9301
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000512.1	RefSeq	region	1	9301	.	+	.	ID=NZ_CAAR01000512.1:1..9301;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000512.1	RefSeq	gene	113	544	.	+	.	ID=gene-STY7866_RS18145;Name=STY7866_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18145
NZ_CAAR01000512.1	Protein Homology	CDS	113	544	.	+	0	ID=cds-WP_000963846.1;Parent=gene-STY7866_RS18145;Dbxref=Genbank:WP_000963846.1;Name=WP_000963846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=STY7866_RS18145;product=nucleoside-diphosphate kinase;protein_id=WP_000963846.1;transl_table=11
NZ_CAAR01000512.1	RefSeq	gene	751	1917	.	+	.	ID=gene-STY7866_RS18155;Name=trmG/rlmN;gbkey=Gene;gene=trmG/rlmN;gene_biotype=protein_coding;locus_tag=STY7866_RS18155
NZ_CAAR01000512.1	Protein Homology	CDS	751	1917	.	+	0	ID=cds-WP_000003206.1;Parent=gene-STY7866_RS18155;Dbxref=Genbank:WP_000003206.1;Name=WP_000003206.1;gbkey=CDS;gene=trmG/rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457057.1;locus_tag=STY7866_RS18155;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003206.1;transl_table=11
NZ_CAAR01000512.1	RefSeq	gene	2211	3185	.	+	.	ID=gene-STY7866_RS18160;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=STY7866_RS18160
NZ_CAAR01000512.1	Protein Homology	CDS	2211	3185	.	+	0	ID=cds-WP_001090905.1;Parent=gene-STY7866_RS18160;Dbxref=Genbank:WP_001090905.1;Name=WP_001090905.1;gbkey=CDS;gene=rodZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457056.1;locus_tag=STY7866_RS18160;product=cytoskeleton protein RodZ;protein_id=WP_001090905.1;transl_table=11
NZ_CAAR01000512.1	RefSeq	gene	3212	4330	.	+	.	ID=gene-STY7866_RS18165;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=STY7866_RS18165
NZ_CAAR01000512.1	Protein Homology	CDS	3212	4330	.	+	0	ID=cds-WP_000551816.1;Parent=gene-STY7866_RS18165;Dbxref=Genbank:WP_000551816.1;Name=WP_000551816.1;gbkey=CDS;gene=ispG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457055.1;locus_tag=STY7866_RS18165;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551816.1;transl_table=11
NZ_CAAR01000512.1	RefSeq	gene	4441	5715	.	+	.	ID=gene-STY7866_RS18170;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=STY7866_RS18170
NZ_CAAR01000512.1	Protein Homology	CDS	4441	5715	.	+	0	ID=cds-WP_001107147.1;Parent=gene-STY7866_RS18170;Dbxref=Genbank:WP_001107147.1;Name=WP_001107147.1;gbkey=CDS;gene=hisS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120428.1;locus_tag=STY7866_RS18170;product=histidine--tRNA ligase;protein_id=WP_001107147.1;transl_table=11
NZ_CAAR01000512.1	RefSeq	gene	5729	6349	.	+	.	ID=gene-STY7866_RS18175;Name=STY7866_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18175
NZ_CAAR01000512.1	Protein Homology	CDS	5729	6349	.	+	0	ID=cds-WP_000409190.1;Parent=gene-STY7866_RS18175;Dbxref=Genbank:WP_000409190.1;Name=WP_000409190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457053.1;locus_tag=STY7866_RS18175;product=YfgM family protein;protein_id=WP_000409190.1;transl_table=11
NZ_CAAR01000512.1	RefSeq	gene	6360	7538	.	+	.	ID=gene-STY7866_RS18180;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=STY7866_RS18180
NZ_CAAR01000512.1	Protein Homology	CDS	6360	7538	.	+	0	ID=cds-WP_001177072.1;Parent=gene-STY7866_RS18180;Dbxref=Genbank:WP_001177072.1;Name=WP_001177072.1;gbkey=CDS;gene=bamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457052.1;locus_tag=STY7866_RS18180;product=outer membrane protein assembly factor BamB;protein_id=WP_001177072.1;transl_table=11
NZ_CAAR01000512.1	RefSeq	gene	7657	9129	.	+	.	ID=gene-STY7866_RS18185;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=STY7866_RS18185
NZ_CAAR01000512.1	Protein Homology	CDS	7657	9129	.	+	0	ID=cds-WP_000249413.1;Parent=gene-STY7866_RS18185;Dbxref=Genbank:WP_000249413.1;Name=WP_000249413.1;gbkey=CDS;gene=der;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457051.1;locus_tag=STY7866_RS18185;product=ribosome biogenesis GTPase Der;protein_id=WP_000249413.1;transl_table=11
##sequence-region NZ_CAAR01000511.1 1 2381
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000511.1	RefSeq	region	1	2381	.	+	.	ID=NZ_CAAR01000511.1:1..2381;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000511.1	RefSeq	pseudogene	1	150	.	-	.	ID=gene-STY7866_RS27660;Name=STY7866_RS27660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27660;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000511.1	Protein Homology	CDS	1	150	.	-	0	ID=cds-STY7866_RS27660;Parent=gene-STY7866_RS27660;Note=Transcription regulator that can both activate or repress expression%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=STY7866_RS27660;partial=true;product=transcriptional regulator SlyA;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000511.1	RefSeq	gene	345	581	.	+	.	ID=gene-STY7866_RS18130;Name=STY7866_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18130
NZ_CAAR01000511.1	Protein Homology	CDS	345	581	.	+	0	ID=cds-WP_000649756.1;Parent=gene-STY7866_RS18130;Dbxref=Genbank:WP_000649756.1;Name=WP_000649756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456087.1;locus_tag=STY7866_RS18130;product=DUF1656 domain-containing protein;protein_id=WP_000649756.1;transl_table=11
NZ_CAAR01000511.1	RefSeq	gene	548	1444	.	+	.	ID=gene-STY7866_RS18135;Name=STY7866_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18135
NZ_CAAR01000511.1	Protein Homology	CDS	548	1444	.	+	0	ID=cds-WP_000016513.1;Parent=gene-STY7866_RS18135;Dbxref=Genbank:WP_000016513.1;Name=WP_000016513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460405.1;locus_tag=STY7866_RS18135;product=HlyD family secretion protein;protein_id=WP_000016513.1;transl_table=11
NZ_CAAR01000511.1	RefSeq	gene	1444	2381	.	+	.	ID=gene-STY7866_RS18140;Name=STY7866_RS18140;end_range=2381,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18140;partial=true
NZ_CAAR01000511.1	Protein Homology	CDS	1444	2381	.	+	0	ID=cds-WP_000777621.1;Parent=gene-STY7866_RS18140;Dbxref=Genbank:WP_000777621.1;Name=WP_000777621.1;end_range=2381,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456089.1;locus_tag=STY7866_RS18140;partial=true;product=hypothetical protein;protein_id=WP_000777621.1;transl_table=11
##sequence-region NZ_CAAR01000510.1 1 3276
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000510.1	RefSeq	region	1	3276	.	+	.	ID=NZ_CAAR01000510.1:1..3276;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000510.1	RefSeq	pseudogene	71	1370	.	+	.	ID=gene-STY7866_RS18110;Name=STY7866_RS18110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18110;pseudo=true
NZ_CAAR01000510.1	Protein Homology	CDS	71	1370	.	+	0	ID=cds-STY7866_RS18110;Parent=gene-STY7866_RS18110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457524.1;locus_tag=STY7866_RS18110;product=FAD-binding oxidoreductase;pseudo=true;transl_table=11
NZ_CAAR01000510.1	RefSeq	pseudogene	1385	1758	.	+	.	ID=gene-STY7866_RS18115;Name=STY7866_RS18115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18115;pseudo=true
NZ_CAAR01000510.1	Protein Homology	CDS	1385	1758	.	+	0	ID=cds-STY7866_RS18115;Parent=gene-STY7866_RS18115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=STY7866_RS18115;product=cupin domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000510.1	RefSeq	gene	1967	3276	.	+	.	ID=gene-STY7866_RS18120;Name=STY7866_RS18120;end_range=3276,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18120;partial=true
NZ_CAAR01000510.1	Protein Homology	CDS	1967	3276	.	+	0	ID=cds-WP_000475951.1;Parent=gene-STY7866_RS18120;Dbxref=Genbank:WP_000475951.1;Name=WP_000475951.1;end_range=3276,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457522.1;locus_tag=STY7866_RS18120;partial=true;product=APC family permease;protein_id=WP_000475951.1;transl_table=11
##sequence-region NZ_CAAR01000509.1 1 2141
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000509.1	RefSeq	region	1	2141	.	+	.	ID=NZ_CAAR01000509.1:1..2141;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000509.1	RefSeq	pseudogene	5	265	.	+	.	ID=gene-STY7866_RS18100;Name=STY7866_RS18100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18100;partial=true;pseudo=true;start_range=.,5
NZ_CAAR01000509.1	Protein Homology	CDS	5	265	.	+	0	ID=cds-STY7866_RS18100;Parent=gene-STY7866_RS18100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454897.1;locus_tag=STY7866_RS18100;partial=true;product=DUF1795 domain-containing protein;pseudo=true;start_range=.,5;transl_table=11
NZ_CAAR01000509.1	RefSeq	pseudogene	284	2141	.	+	.	ID=gene-STY7866_RS18105;Name=STY7866_RS18105;end_range=2141,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18105;partial=true;pseudo=true
NZ_CAAR01000509.1	Protein Homology	CDS	284	2141	.	+	0	ID=cds-STY7866_RS18105;Parent=gene-STY7866_RS18105;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2141,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454898.1;locus_tag=STY7866_RS18105;partial=true;product=RHS repeat protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000508.1 1 4455
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000508.1	RefSeq	region	1	4455	.	+	.	ID=NZ_CAAR01000508.1:1..4455;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000508.1	RefSeq	gene	1	133	.	+	.	ID=gene-STY7866_RS18045;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=STY7866_RS18045;partial=true;start_range=.,1
NZ_CAAR01000508.1	Protein Homology	CDS	1	133	.	+	1	ID=cds-WP_001764862.1;Parent=gene-STY7866_RS18045;Dbxref=Genbank:WP_001764862.1;Name=WP_001764862.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=STY7866_RS18045;partial=true;product=50S ribosomal protein L23;protein_id=WP_001764862.1;start_range=.,1;transl_table=11
NZ_CAAR01000508.1	RefSeq	gene	151	972	.	+	.	ID=gene-STY7866_RS18050;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=STY7866_RS18050
NZ_CAAR01000508.1	Protein Homology	CDS	151	972	.	+	0	ID=cds-WP_000301869.1;Parent=gene-STY7866_RS18050;Dbxref=Genbank:WP_000301869.1;Name=WP_000301869.1;gbkey=CDS;gene=rplB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=STY7866_RS18050;product=50S ribosomal protein L2;protein_id=WP_000301869.1;transl_table=11
NZ_CAAR01000508.1	RefSeq	gene	989	1297	.	+	.	ID=gene-STY7866_RS18055;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=STY7866_RS18055
NZ_CAAR01000508.1	Protein Homology	CDS	989	1297	.	+	0	ID=cds-WP_001138116.1;Parent=gene-STY7866_RS18055;Dbxref=Genbank:WP_001138116.1;Name=WP_001138116.1;gbkey=CDS;gene=rpsS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=STY7866_RS18055;product=30S ribosomal protein S19;protein_id=WP_001138116.1;transl_table=11
NZ_CAAR01000508.1	RefSeq	gene	1281	1613	.	+	.	ID=gene-STY7866_RS18060;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=STY7866_RS18060
NZ_CAAR01000508.1	Protein Homology	CDS	1281	1613	.	+	0	ID=cds-WP_000447529.1;Parent=gene-STY7866_RS18060;Dbxref=Genbank:WP_000447529.1;Name=WP_000447529.1;gbkey=CDS;gene=rplV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=STY7866_RS18060;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11
NZ_CAAR01000508.1	RefSeq	gene	1631	2332	.	+	.	ID=gene-STY7866_RS18065;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=STY7866_RS18065
NZ_CAAR01000508.1	Protein Homology	CDS	1631	2332	.	+	0	ID=cds-WP_000529945.1;Parent=gene-STY7866_RS18065;Dbxref=Genbank:WP_000529945.1;Name=WP_000529945.1;gbkey=CDS;gene=rpsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529946.1;locus_tag=STY7866_RS18065;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11
NZ_CAAR01000508.1	RefSeq	gene	2345	2755	.	+	.	ID=gene-STY7866_RS18070;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=STY7866_RS18070
NZ_CAAR01000508.1	Protein Homology	CDS	2345	2755	.	+	0	ID=cds-WP_000941208.1;Parent=gene-STY7866_RS18070;Dbxref=Genbank:WP_000941208.1;Name=WP_000941208.1;gbkey=CDS;gene=rplP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=STY7866_RS18070;product=50S ribosomal protein L16;protein_id=WP_000941208.1;transl_table=11
NZ_CAAR01000508.1	RefSeq	gene	2755	2946	.	+	.	ID=gene-STY7866_RS18075;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=STY7866_RS18075
NZ_CAAR01000508.1	Protein Homology	CDS	2755	2946	.	+	0	ID=cds-WP_000644742.1;Parent=gene-STY7866_RS18075;Dbxref=Genbank:WP_000644742.1;Name=WP_000644742.1;gbkey=CDS;gene=rpmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=STY7866_RS18075;product=50S ribosomal protein L29;protein_id=WP_000644742.1;transl_table=11
NZ_CAAR01000508.1	RefSeq	gene	2946	3200	.	+	.	ID=gene-STY7866_RS18080;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=STY7866_RS18080
NZ_CAAR01000508.1	Protein Homology	CDS	2946	3200	.	+	0	ID=cds-WP_000130101.1;Parent=gene-STY7866_RS18080;Dbxref=Genbank:WP_000130101.1;Name=WP_000130101.1;gbkey=CDS;gene=rpsQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=STY7866_RS18080;product=30S ribosomal protein S17;protein_id=WP_000130101.1;transl_table=11
NZ_CAAR01000508.1	RefSeq	gene	3364	3735	.	+	.	ID=gene-STY7866_RS18085;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=STY7866_RS18085
NZ_CAAR01000508.1	Protein Homology	CDS	3364	3735	.	+	0	ID=cds-WP_000613954.1;Parent=gene-STY7866_RS18085;Dbxref=Genbank:WP_000613954.1;Name=WP_000613954.1;gbkey=CDS;gene=rplN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458470.1;locus_tag=STY7866_RS18085;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11
NZ_CAAR01000508.1	RefSeq	gene	3746	4060	.	+	.	ID=gene-STY7866_RS18090;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=STY7866_RS18090
NZ_CAAR01000508.1	Protein Homology	CDS	3746	4060	.	+	0	ID=cds-WP_000729187.1;Parent=gene-STY7866_RS18090;Dbxref=Genbank:WP_000729187.1;Name=WP_000729187.1;gbkey=CDS;gene=rplX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=STY7866_RS18090;product=50S ribosomal protein L24;protein_id=WP_000729187.1;transl_table=11
NZ_CAAR01000508.1	RefSeq	gene	4075	4455	.	+	.	ID=gene-STY7866_RS18095;Name=rplE;end_range=4455,.;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=STY7866_RS18095;partial=true
NZ_CAAR01000508.1	Protein Homology	CDS	4075	4455	.	+	0	ID=cds-WP_001096205.1;Parent=gene-STY7866_RS18095;Dbxref=Genbank:WP_001096205.1;Name=WP_001096205.1;end_range=4455,.;gbkey=CDS;gene=rplE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=STY7866_RS18095;partial=true;product=50S ribosomal protein L5;protein_id=WP_001096205.1;transl_table=11
##sequence-region NZ_CAAR01000507.1 1 1223
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000507.1	RefSeq	region	1	1223	.	+	.	ID=NZ_CAAR01000507.1:1..1223;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000507.1	RefSeq	pseudogene	1	87	.	+	.	ID=gene-STY7866_RS18030;Name=STY7866_RS18030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18030;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000507.1	Protein Homology	CDS	1	87	.	+	0	ID=cds-STY7866_RS18030;Parent=gene-STY7866_RS18030;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458977.1;locus_tag=STY7866_RS18030;partial=true;product=activating enzyme;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000507.1	RefSeq	gene	120	893	.	-	.	ID=gene-STY7866_RS18035;Name=STY7866_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18035
NZ_CAAR01000507.1	Protein Homology	CDS	120	893	.	-	0	ID=cds-WP_000119010.1;Parent=gene-STY7866_RS18035;Dbxref=Genbank:WP_000119010.1;Name=WP_000119010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458976.1;locus_tag=STY7866_RS18035;product=metal-dependent hydrolase;protein_id=WP_000119010.1;transl_table=11
NZ_CAAR01000507.1	RefSeq	pseudogene	890	1223	.	-	.	ID=gene-STY7866_RS18040;Name=STY7866_RS18040;end_range=1223,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS18040;partial=true;pseudo=true
NZ_CAAR01000507.1	Protein Homology	CDS	890	1223	.	-	1	ID=cds-STY7866_RS18040;Parent=gene-STY7866_RS18040;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1223,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458975.1;locus_tag=STY7866_RS18040;partial=true;product=patatin family protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000506.1 1 9755
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000506.1	RefSeq	region	1	9755	.	+	.	ID=NZ_CAAR01000506.1:1..9755;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000506.1	RefSeq	gene	1	1488	.	+	.	ID=gene-STY7866_RS17980;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=STY7866_RS17980;partial=true;start_range=.,1
NZ_CAAR01000506.1	Protein Homology	CDS	1	1488	.	+	0	ID=cds-WP_000407457.1;Parent=gene-STY7866_RS17980;Dbxref=Genbank:WP_000407457.1;Name=WP_000407457.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455562.1;locus_tag=STY7866_RS17980;partial=true;product=intermembrane transport protein PqiB;protein_id=WP_000407457.1;start_range=.,1;transl_table=11
NZ_CAAR01000506.1	RefSeq	gene	1485	2048	.	+	.	ID=gene-STY7866_RS17985;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=STY7866_RS17985
NZ_CAAR01000506.1	Protein Homology	CDS	1485	2048	.	+	0	ID=cds-WP_000759136.1;Parent=gene-STY7866_RS17985;Dbxref=Genbank:WP_000759136.1;Name=WP_000759136.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455563.1;locus_tag=STY7866_RS17985;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759136.1;transl_table=11
NZ_CAAR01000506.1	RefSeq	gene	2302	2469	.	+	.	ID=gene-STY7866_RS17990;Name=STY7866_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17990
NZ_CAAR01000506.1	Protein Homology	CDS	2302	2469	.	+	0	ID=cds-WP_001764860.1;Parent=gene-STY7866_RS17990;Dbxref=Genbank:WP_001764860.1;Name=WP_001764860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455564.1;locus_tag=STY7866_RS17990;product=ribosome modulation factor;protein_id=WP_001764860.1;transl_table=11
NZ_CAAR01000506.1	RefSeq	gene	2569	3087	.	-	.	ID=gene-STY7866_RS17995;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=STY7866_RS17995
NZ_CAAR01000506.1	Protein Homology	CDS	2569	3087	.	-	0	ID=cds-WP_000227928.1;Parent=gene-STY7866_RS17995;Dbxref=Genbank:WP_000227928.1;Name=WP_000227928.1;gbkey=CDS;gene=fabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=STY7866_RS17995;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227928.1;transl_table=11
NZ_CAAR01000506.1	RefSeq	gene	3156	4916	.	-	.	ID=gene-STY7866_RS18000;Name=STY7866_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18000
NZ_CAAR01000506.1	Protein Homology	CDS	3156	4916	.	-	0	ID=cds-WP_000156455.1;Parent=gene-STY7866_RS18000;Dbxref=Genbank:WP_000156455.1;Name=WP_000156455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455566.1;locus_tag=STY7866_RS18000;product=Lon protease family protein;protein_id=WP_000156455.1;transl_table=11
NZ_CAAR01000506.1	RefSeq	gene	5102	5554	.	+	.	ID=gene-STY7866_RS18005;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=STY7866_RS18005
NZ_CAAR01000506.1	Protein Homology	CDS	5102	5554	.	+	0	ID=cds-WP_000877174.1;Parent=gene-STY7866_RS18005;Dbxref=Genbank:WP_000877174.1;Name=WP_000877174.1;gbkey=CDS;gene=matP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455567.1;locus_tag=STY7866_RS18005;product=macrodomain Ter protein MatP;protein_id=WP_000877174.1;transl_table=11
NZ_CAAR01000506.1	RefSeq	gene	5626	6678	.	-	.	ID=gene-STY7866_RS18010;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=STY7866_RS18010
NZ_CAAR01000506.1	Protein Homology	CDS	5626	6678	.	-	0	ID=cds-WP_010989142.1;Parent=gene-STY7866_RS18010;Dbxref=Genbank:WP_010989142.1;Name=WP_010989142.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455568.1;locus_tag=STY7866_RS18010;product=porin OmpA;protein_id=WP_010989142.1;transl_table=11
NZ_CAAR01000506.1	RefSeq	gene	7033	7542	.	-	.	ID=gene-STY7866_RS18015;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=STY7866_RS18015
NZ_CAAR01000506.1	Protein Homology	CDS	7033	7542	.	-	0	ID=cds-WP_000288732.1;Parent=gene-STY7866_RS18015;Dbxref=Genbank:WP_000288732.1;Name=WP_000288732.1;gbkey=CDS;gene=sulA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455569.1;locus_tag=STY7866_RS18015;product=cell division inhibitor SulA;protein_id=WP_000288732.1;transl_table=11
NZ_CAAR01000506.1	RefSeq	gene	7759	8364	.	+	.	ID=gene-STY7866_RS18020;Name=STY7866_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS18020
NZ_CAAR01000506.1	Protein Homology	CDS	7759	8364	.	+	0	ID=cds-WP_001202375.1;Parent=gene-STY7866_RS18020;Dbxref=Genbank:WP_001202375.1;Name=WP_001202375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=STY7866_RS18020;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_001202375.1;transl_table=11
NZ_CAAR01000506.1	RefSeq	gene	8351	9755	.	-	.	ID=gene-STY7866_RS18025;Name=yccS;end_range=9755,.;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=STY7866_RS18025;partial=true
NZ_CAAR01000506.1	Protein Homology	CDS	8351	9755	.	-	1	ID=cds-WP_000851916.1;Parent=gene-STY7866_RS18025;Dbxref=Genbank:WP_000851916.1;Name=WP_000851916.1;end_range=9755,.;gbkey=CDS;gene=yccS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455571.1;locus_tag=STY7866_RS18025;partial=true;product=TIGR01666 family membrane protein;protein_id=WP_000851916.1;transl_table=11
##sequence-region NZ_CAAR01000505.1 1 1218
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000505.1	RefSeq	region	1	1218	.	+	.	ID=NZ_CAAR01000505.1:1..1218;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000505.1	RefSeq	gene	1	689	.	-	.	ID=gene-STY7866_RS17970;Name=STY7866_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17970;partial=true;start_range=.,1
NZ_CAAR01000505.1	Protein Homology	CDS	1	689	.	-	0	ID=cds-WP_001764859.1;Parent=gene-STY7866_RS17970;Dbxref=Genbank:WP_001764859.1;Name=WP_001764859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456325.1;locus_tag=STY7866_RS17970;partial=true;product=AMP-binding protein;protein_id=WP_001764859.1;start_range=.,1;transl_table=11
NZ_CAAR01000505.1	RefSeq	gene	894	1218	.	-	.	ID=gene-STY7866_RS17975;Name=STY7866_RS17975;end_range=1218,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17975;partial=true
NZ_CAAR01000505.1	Protein Homology	CDS	894	1218	.	-	1	ID=cds-WP_000299544.1;Parent=gene-STY7866_RS17975;Dbxref=Genbank:WP_000299544.1;Name=WP_000299544.1;end_range=1218,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456326.1;locus_tag=STY7866_RS17975;partial=true;product=Slp family lipoprotein;protein_id=WP_000299544.1;transl_table=11
##sequence-region NZ_CAAR01000504.1 1 5464
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000504.1	RefSeq	region	1	5464	.	+	.	ID=NZ_CAAR01000504.1:1..5464;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000504.1	RefSeq	gene	1	188	.	+	.	ID=gene-STY7866_RS17935;Name=STY7866_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17935;partial=true;start_range=.,1
NZ_CAAR01000504.1	Protein Homology	CDS	1	188	.	+	2	ID=cds-WP_000223267.1;Parent=gene-STY7866_RS17935;Dbxref=Genbank:WP_000223267.1;Name=WP_000223267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455841.1;locus_tag=STY7866_RS17935;partial=true;product=mechanosensitive ion channel;protein_id=WP_000223267.1;start_range=.,1;transl_table=11
NZ_CAAR01000504.1	RefSeq	gene	274	876	.	-	.	ID=gene-STY7866_RS17940;Name=STY7866_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17940
NZ_CAAR01000504.1	Protein Homology	CDS	274	876	.	-	0	ID=cds-WP_000163369.1;Parent=gene-STY7866_RS17940;Dbxref=Genbank:WP_000163369.1;Name=WP_000163369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455840.1;locus_tag=STY7866_RS17940;product=helix-turn-helix domain-containing protein;protein_id=WP_000163369.1;transl_table=11
NZ_CAAR01000504.1	RefSeq	gene	920	1606	.	+	.	ID=gene-STY7866_RS17945;Name=STY7866_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17945
NZ_CAAR01000504.1	Protein Homology	CDS	920	1606	.	+	0	ID=cds-WP_000097260.1;Parent=gene-STY7866_RS17945;Dbxref=Genbank:WP_000097260.1;Name=WP_000097260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455839.1;locus_tag=STY7866_RS17945;product=B3/4 domain-containing protein;protein_id=WP_000097260.1;transl_table=11
NZ_CAAR01000504.1	RefSeq	gene	1634	1972	.	+	.	ID=gene-STY7866_RS17950;Name=STY7866_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17950
NZ_CAAR01000504.1	Protein Homology	CDS	1634	1972	.	+	0	ID=cds-WP_000051816.1;Parent=gene-STY7866_RS17950;Dbxref=Genbank:WP_000051816.1;Name=WP_000051816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455838.1;locus_tag=STY7866_RS17950;product=hypothetical protein;protein_id=WP_000051816.1;transl_table=11
NZ_CAAR01000504.1	RefSeq	gene	2078	2635	.	-	.	ID=gene-STY7866_RS17955;Name=STY7866_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17955
NZ_CAAR01000504.1	Protein Homology	CDS	2078	2635	.	-	0	ID=cds-WP_001062615.1;Parent=gene-STY7866_RS17955;Dbxref=Genbank:WP_001062615.1;Name=WP_001062615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455837.1;locus_tag=STY7866_RS17955;product=peroxiredoxin;protein_id=WP_001062615.1;transl_table=11
NZ_CAAR01000504.1	RefSeq	gene	2734	3567	.	-	.	ID=gene-STY7866_RS17960;Name=STY7866_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17960
NZ_CAAR01000504.1	Protein Homology	CDS	2734	3567	.	-	0	ID=cds-WP_001242932.1;Parent=gene-STY7866_RS17960;Dbxref=Genbank:WP_001242932.1;Name=WP_001242932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455836.1;locus_tag=STY7866_RS17960;product=hypothetical protein;protein_id=WP_001242932.1;transl_table=11
NZ_CAAR01000504.1	RefSeq	gene	3588	5414	.	-	.	ID=gene-STY7866_RS17965;Name=STY7866_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17965
NZ_CAAR01000504.1	Protein Homology	CDS	3588	5414	.	-	0	ID=cds-WP_072196056.1;Parent=gene-STY7866_RS17965;Dbxref=Genbank:WP_072196056.1;Name=WP_072196056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001002009.1;locus_tag=STY7866_RS17965;product=hypothetical protein;protein_id=WP_072196056.1;transl_table=11
##sequence-region NZ_CAAR01000503.1 1 4120
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000503.1	RefSeq	region	1	4120	.	+	.	ID=NZ_CAAR01000503.1:1..4120;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000503.1	RefSeq	gene	1	980	.	-	.	ID=gene-STY7866_RS17910;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=STY7866_RS17910;partial=true;start_range=.,1
NZ_CAAR01000503.1	Protein Homology	CDS	1	980	.	-	0	ID=cds-WP_000018569.1;Parent=gene-STY7866_RS17910;Dbxref=Genbank:WP_000018569.1;Name=WP_000018569.1;gbkey=CDS;gene=pheS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=STY7866_RS17910;partial=true;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018569.1;start_range=.,1;transl_table=11
NZ_CAAR01000503.1	RefSeq	gene	1117	1161	.	-	.	ID=gene-STY7866_RS27655;Name=STY7866_RS27655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27655
NZ_CAAR01000503.1	Protein Homology	CDS	1117	1161	.	-	0	ID=cds-WP_001386830.1;Parent=gene-STY7866_RS27655;Dbxref=Genbank:WP_001386830.1;Name=WP_001386830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=STY7866_RS27655;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11
NZ_CAAR01000503.1	RefSeq	gene	1282	1638	.	-	.	ID=gene-STY7866_RS17915;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=STY7866_RS17915
NZ_CAAR01000503.1	Protein Homology	CDS	1282	1638	.	-	0	ID=cds-WP_000124850.1;Parent=gene-STY7866_RS17915;Dbxref=Genbank:WP_000124850.1;Name=WP_000124850.1;gbkey=CDS;gene=rplT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=STY7866_RS17915;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11
NZ_CAAR01000503.1	RefSeq	gene	1689	1886	.	-	.	ID=gene-STY7866_RS17920;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=STY7866_RS17920
NZ_CAAR01000503.1	Protein Homology	CDS	1689	1886	.	-	0	ID=cds-WP_001124225.1;Parent=gene-STY7866_RS17920;Dbxref=Genbank:WP_001124225.1;Name=WP_001124225.1;gbkey=CDS;gene=rpmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=STY7866_RS17920;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11
NZ_CAAR01000503.1	RefSeq	gene	1982	2524	.	-	.	ID=gene-STY7866_RS17925;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=STY7866_RS17925
NZ_CAAR01000503.1	Protein Homology	CDS	1982	2524	.	-	0	ID=cds-WP_011106936.1;Parent=gene-STY7866_RS17925;Dbxref=Genbank:WP_011106936.1;Name=WP_011106936.1;gbkey=CDS;gene=infC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456178.3;locus_tag=STY7866_RS17925;product=translation initiation factor IF-3;protein_id=WP_011106936.1;transl_table=11
NZ_CAAR01000503.1	RefSeq	gene	2528	4120	.	-	.	ID=gene-STY7866_RS17930;Name=thrS;end_range=4120,.;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=STY7866_RS17930;partial=true
NZ_CAAR01000503.1	Protein Homology	CDS	2528	4120	.	-	0	ID=cds-WP_000318642.1;Parent=gene-STY7866_RS17930;Dbxref=Genbank:WP_000318642.1;Name=WP_000318642.1;end_range=4120,.;gbkey=CDS;gene=thrS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010245687.1;locus_tag=STY7866_RS17930;partial=true;product=threonine--tRNA ligase;protein_id=WP_000318642.1;transl_table=11
##sequence-region NZ_CAAR01000502.1 1 4358
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000502.1	RefSeq	region	1	4358	.	+	.	ID=NZ_CAAR01000502.1:1..4358;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000502.1	RefSeq	gene	1	128	.	+	.	ID=gene-STY7866_RS17885;Name=STY7866_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17885;partial=true;start_range=.,1
NZ_CAAR01000502.1	Protein Homology	CDS	1	128	.	+	2	ID=cds-WP_000408762.1;Parent=gene-STY7866_RS17885;Dbxref=Genbank:WP_000408762.1;Name=WP_000408762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456806.1;locus_tag=STY7866_RS17885;partial=true;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_000408762.1;start_range=.,1;transl_table=11
NZ_CAAR01000502.1	RefSeq	gene	118	381	.	+	.	ID=gene-STY7866_RS17890;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=STY7866_RS17890
NZ_CAAR01000502.1	Protein Homology	CDS	118	381	.	+	0	ID=cds-WP_001260058.1;Parent=gene-STY7866_RS17890;Dbxref=Genbank:WP_001260058.1;Name=WP_001260058.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456805.1;locus_tag=STY7866_RS17890;product=chaperone NapD;protein_id=WP_001260058.1;transl_table=11
NZ_CAAR01000502.1	RefSeq	gene	378	2864	.	+	.	ID=gene-STY7866_RS17895;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=STY7866_RS17895
NZ_CAAR01000502.1	Protein Homology	CDS	378	2864	.	+	0	ID=cds-WP_000778090.1;Parent=gene-STY7866_RS17895;Dbxref=Genbank:WP_000778090.1;Name=WP_000778090.1;gbkey=CDS;gene=napA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456804.1;locus_tag=STY7866_RS17895;product=nitrate reductase catalytic subunit NapA;protein_id=WP_000778090.1;transl_table=11
NZ_CAAR01000502.1	RefSeq	gene	2871	3566	.	+	.	ID=gene-STY7866_RS17900;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=STY7866_RS17900
NZ_CAAR01000502.1	Protein Homology	CDS	2871	3566	.	+	0	ID=cds-WP_000091679.1;Parent=gene-STY7866_RS17900;Dbxref=Genbank:WP_000091679.1;Name=WP_000091679.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456803.1;locus_tag=STY7866_RS17900;product=ferredoxin-type protein NapG;protein_id=WP_000091679.1;transl_table=11
NZ_CAAR01000502.1	RefSeq	gene	3553	4358	.	+	.	ID=gene-STY7866_RS17905;Name=napH;end_range=4358,.;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=STY7866_RS17905;partial=true
NZ_CAAR01000502.1	Protein Homology	CDS	3553	4358	.	+	0	ID=cds-WP_001764856.1;Parent=gene-STY7866_RS17905;Dbxref=Genbank:WP_001764856.1;Name=WP_001764856.1;end_range=4358,.;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456802.1;locus_tag=STY7866_RS17905;partial=true;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_001764856.1;transl_table=11
##sequence-region NZ_CAAR01000501.1 1 1444
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000501.1	RefSeq	region	1	1444	.	+	.	ID=NZ_CAAR01000501.1:1..1444;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000501.1	RefSeq	gene	1	1041	.	+	.	ID=gene-STY7866_RS17875;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=STY7866_RS17875;partial=true;start_range=.,1
NZ_CAAR01000501.1	Protein Homology	CDS	1	1041	.	+	0	ID=cds-WP_000630955.1;Parent=gene-STY7866_RS17875;Dbxref=Genbank:WP_000630955.1;Name=WP_000630955.1;gbkey=CDS;gene=srmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457119.1;locus_tag=STY7866_RS17875;partial=true;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000630955.1;start_range=.,1;transl_table=11
NZ_CAAR01000501.1	RefSeq	pseudogene	1070	1444	.	-	.	ID=gene-STY7866_RS17880;Name=STY7866_RS17880;end_range=1444,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17880;partial=true;pseudo=true;start_range=.,1070
NZ_CAAR01000501.1	Protein Homology	CDS	1070	1444	.	-	1	ID=cds-STY7866_RS17880;Parent=gene-STY7866_RS17880;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1444,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=STY7866_RS17880;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,1070;transl_table=11
##sequence-region NZ_CAAR01000500.1 1 3389
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000500.1	RefSeq	region	1	3389	.	+	.	ID=NZ_CAAR01000500.1:1..3389;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000500.1	RefSeq	gene	1	1165	.	-	.	ID=gene-STY7866_RS17855;Name=STY7866_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17855;partial=true;start_range=.,1
NZ_CAAR01000500.1	Protein Homology	CDS	1	1165	.	-	0	ID=cds-WP_151260011.1;Parent=gene-STY7866_RS17855;Dbxref=Genbank:WP_151260011.1;Name=WP_151260011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455847.1;locus_tag=STY7866_RS17855;partial=true;product=chemoreceptor protein;protein_id=WP_151260011.1;start_range=.,1;transl_table=11
NZ_CAAR01000500.1	RefSeq	gene	1575	2138	.	-	.	ID=gene-STY7866_RS17860;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=STY7866_RS17860
NZ_CAAR01000500.1	Protein Homology	CDS	1575	2138	.	-	0	ID=cds-WP_001046799.1;Parent=gene-STY7866_RS17860;Dbxref=Genbank:WP_001046799.1;Name=WP_001046799.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=STY7866_RS17860;product=DNA endonuclease SmrA;protein_id=WP_001046799.1;transl_table=11
NZ_CAAR01000500.1	RefSeq	gene	2396	2911	.	+	.	ID=gene-STY7866_RS17865;Name=STY7866_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17865
NZ_CAAR01000500.1	Protein Homology	CDS	2396	2911	.	+	0	ID=cds-WP_000945036.1;Parent=gene-STY7866_RS17865;Dbxref=Genbank:WP_000945036.1;Name=WP_000945036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455845.1;locus_tag=STY7866_RS17865;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945036.1;transl_table=11
NZ_CAAR01000500.1	RefSeq	gene	3107	3389	.	+	.	ID=gene-STY7866_RS17870;Name=STY7866_RS17870;end_range=3389,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17870;partial=true
NZ_CAAR01000500.1	Protein Homology	CDS	3107	3389	.	+	0	ID=cds-WP_031626425.1;Parent=gene-STY7866_RS17870;Dbxref=Genbank:WP_031626425.1;Name=WP_031626425.1;end_range=3389,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309942.1;locus_tag=STY7866_RS17870;partial=true;product=cyclic nucleotide-binding domain-containing protein;protein_id=WP_031626425.1;transl_table=11
##sequence-region NZ_CAAR01000499.1 1 7358
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000499.1	RefSeq	region	1	7358	.	+	.	ID=NZ_CAAR01000499.1:1..7358;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000499.1	RefSeq	gene	1	923	.	+	.	ID=gene-STY7866_RS17815;Name=STY7866_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17815;partial=true;start_range=.,1
NZ_CAAR01000499.1	Protein Homology	CDS	1	923	.	+	2	ID=cds-WP_000313803.1;Parent=gene-STY7866_RS17815;Dbxref=Genbank:WP_000313803.1;Name=WP_000313803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455494.1;locus_tag=STY7866_RS17815;partial=true;product=DGQHR domain-containing protein;protein_id=WP_000313803.1;start_range=.,1;transl_table=11
NZ_CAAR01000499.1	RefSeq	pseudogene	920	1800	.	+	.	ID=gene-STY7866_RS17820;Name=STY7866_RS17820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17820;pseudo=true
NZ_CAAR01000499.1	Protein Homology	CDS	920	1800	.	+	0	ID=cds-STY7866_RS17820;Parent=gene-STY7866_RS17820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455493.1;locus_tag=STY7866_RS17820;product=Dam family site-specific DNA-(adenine-N6)-methyltransferase;pseudo=true;transl_table=11
NZ_CAAR01000499.1	RefSeq	gene	1806	2045	.	+	.	ID=gene-STY7866_RS17825;Name=STY7866_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17825
NZ_CAAR01000499.1	Protein Homology	CDS	1806	2045	.	+	0	ID=cds-WP_001754984.1;Parent=gene-STY7866_RS17825;Dbxref=Genbank:WP_001754984.1;Name=WP_001754984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459982.1;locus_tag=STY7866_RS17825;product=DUF4060 family protein;protein_id=WP_001754984.1;transl_table=11
NZ_CAAR01000499.1	RefSeq	gene	2086	2334	.	+	.	ID=gene-STY7866_RS17830;Name=STY7866_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17830
NZ_CAAR01000499.1	Protein Homology	CDS	2086	2334	.	+	0	ID=cds-WP_000065276.1;Parent=gene-STY7866_RS17830;Dbxref=Genbank:WP_000065276.1;Name=WP_000065276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455491.1;locus_tag=STY7866_RS17830;product=excisionase family protein;protein_id=WP_000065276.1;transl_table=11
NZ_CAAR01000499.1	RefSeq	pseudogene	2379	3672	.	+	.	ID=gene-STY7866_RS17835;Name=STY7866_RS17835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17835;pseudo=true
NZ_CAAR01000499.1	Protein Homology	CDS	2379	3672	.	+	0	ID=cds-STY7866_RS17835;Parent=gene-STY7866_RS17835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459980.1;locus_tag=STY7866_RS17835;product=site-specific integrase;pseudo=true;transl_table=11
NZ_CAAR01000499.1	RefSeq	gene	3867	5069	.	+	.	ID=gene-STY7866_RS17840;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=STY7866_RS17840
NZ_CAAR01000499.1	Protein Homology	CDS	3867	5069	.	+	0	ID=cds-WP_000191411.1;Parent=gene-STY7866_RS17840;Dbxref=Genbank:WP_000191411.1;Name=WP_000191411.1;gbkey=CDS;gene=pncB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455489.1;locus_tag=STY7866_RS17840;product=nicotinate phosphoribosyltransferase;protein_id=WP_000191411.1;transl_table=11
NZ_CAAR01000499.1	RefSeq	gene	5150	6583	.	-	.	ID=gene-STY7866_RS17845;Name=STY7866_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17845
NZ_CAAR01000499.1	Protein Homology	CDS	5150	6583	.	-	0	ID=cds-WP_000893189.1;Parent=gene-STY7866_RS17845;Dbxref=Genbank:WP_000893189.1;Name=WP_000893189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455488.1;locus_tag=STY7866_RS17845;product=sodium:alanine symporter family protein;protein_id=WP_000893189.1;transl_table=11
NZ_CAAR01000499.1	RefSeq	gene	6829	7358	.	-	.	ID=gene-STY7866_RS17850;Name=STY7866_RS17850;end_range=7358,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17850;partial=true
NZ_CAAR01000499.1	Protein Homology	CDS	6829	7358	.	-	2	ID=cds-WP_031626424.1;Parent=gene-STY7866_RS17850;Dbxref=Genbank:WP_031626424.1;Name=WP_031626424.1;end_range=7358,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179185.1;locus_tag=STY7866_RS17850;partial=true;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_031626424.1;transl_table=11
##sequence-region NZ_CAAR01000498.1 1 4028
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000498.1	RefSeq	region	1	4028	.	+	.	ID=NZ_CAAR01000498.1:1..4028;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000498.1	RefSeq	gene	1	943	.	+	.	ID=gene-STY7866_RS17795;Name=STY7866_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17795;partial=true;start_range=.,1
NZ_CAAR01000498.1	Protein Homology	CDS	1	943	.	+	1	ID=cds-WP_000305011.1;Parent=gene-STY7866_RS17795;Dbxref=Genbank:WP_000305011.1;Name=WP_000305011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454652.1;locus_tag=STY7866_RS17795;partial=true;product=hypothetical protein;protein_id=WP_000305011.1;start_range=.,1;transl_table=11
NZ_CAAR01000498.1	RefSeq	gene	998	1897	.	-	.	ID=gene-STY7866_RS17800;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=STY7866_RS17800
NZ_CAAR01000498.1	Protein Homology	CDS	998	1897	.	-	0	ID=cds-WP_000062872.1;Parent=gene-STY7866_RS17800;Dbxref=Genbank:WP_000062872.1;Name=WP_000062872.1;gbkey=CDS;gene=nhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454651.1;locus_tag=STY7866_RS17800;product=transcriptional activator NhaR;protein_id=WP_000062872.1;transl_table=11
NZ_CAAR01000498.1	RefSeq	gene	1959	3125	.	-	.	ID=gene-STY7866_RS17805;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=STY7866_RS17805
NZ_CAAR01000498.1	Protein Homology	CDS	1959	3125	.	-	0	ID=cds-WP_000681337.1;Parent=gene-STY7866_RS17805;Dbxref=Genbank:WP_000681337.1;Name=WP_000681337.1;gbkey=CDS;gene=nhaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454650.1;locus_tag=STY7866_RS17805;product=Na+/H+ antiporter NhaA;protein_id=WP_000681337.1;transl_table=11
NZ_CAAR01000498.1	RefSeq	pseudogene	3288	4028	.	-	.	ID=gene-STY7866_RS17810;Name=STY7866_RS17810;end_range=4028,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17810;partial=true;pseudo=true
NZ_CAAR01000498.1	Protein Homology	CDS	3288	4028	.	-	0	ID=cds-STY7866_RS17810;Parent=gene-STY7866_RS17810;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4028,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454649.1;locus_tag=STY7866_RS17810;partial=true;product=arylsulfatase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000497.1 1 1394
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000497.1	RefSeq	region	1	1394	.	+	.	ID=NZ_CAAR01000497.1:1..1394;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000497.1	RefSeq	pseudogene	121	1168	.	+	.	ID=gene-STY7866_RS17785;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=pseudogene;locus_tag=STY7866_RS17785;pseudo=true
NZ_CAAR01000497.1	Protein Homology	CDS	121	1168	.	+	0	ID=cds-STY7866_RS17785;Parent=gene-STY7866_RS17785;Note=frameshifted;gbkey=CDS;gene=sohB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455781.1;locus_tag=STY7866_RS17785;product=protease SohB;pseudo=true;transl_table=11
NZ_CAAR01000497.1	RefSeq	gene	1210	1394	.	-	.	ID=gene-STY7866_RS17790;Name=STY7866_RS17790;end_range=1394,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17790;partial=true
NZ_CAAR01000497.1	Protein Homology	CDS	1210	1394	.	-	2	ID=cds-WP_000496279.1;Parent=gene-STY7866_RS17790;Dbxref=Genbank:WP_000496279.1;Name=WP_000496279.1;end_range=1394,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455782.1;locus_tag=STY7866_RS17790;partial=true;product=DUF2498 family protein;protein_id=WP_000496279.1;transl_table=11
##sequence-region NZ_CAAR01000496.1 1 8023
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000496.1	RefSeq	region	1	8023	.	+	.	ID=NZ_CAAR01000496.1:1..8023;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000496.1	RefSeq	gene	1	1180	.	-	.	ID=gene-STY7866_RS17745;Name=STY7866_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17745;partial=true;start_range=.,1
NZ_CAAR01000496.1	Protein Homology	CDS	1	1180	.	-	0	ID=cds-WP_001055298.1;Parent=gene-STY7866_RS17745;Dbxref=Genbank:WP_001055298.1;Name=WP_001055298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458234.1;locus_tag=STY7866_RS17745;partial=true;product=L-lactate permease;protein_id=WP_001055298.1;start_range=.,1;transl_table=11
NZ_CAAR01000496.1	RefSeq	pseudogene	1479	4529	.	-	.	ID=gene-STY7866_RS17750;Name=STY7866_RS17750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17750;pseudo=true
NZ_CAAR01000496.1	Protein Homology	CDS	1479	4529	.	-	0	ID=cds-STY7866_RS17750;Parent=gene-STY7866_RS17750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458235.1;locus_tag=STY7866_RS17750;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000496.1	RefSeq	pseudogene	4519	4557	.	-	.	ID=gene-STY7866_RS27650;Name=STY7866_RS27650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27650;partial=true;pseudo=true;start_range=.,4519
NZ_CAAR01000496.1	Protein Homology	CDS	4519	4557	.	-	0	ID=cds-STY7866_RS27650;Parent=gene-STY7866_RS27650;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13018.4;locus_tag=STY7866_RS27650;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4519;transl_table=11
NZ_CAAR01000496.1	RefSeq	pseudogene	4601	5285	.	-	.	ID=gene-STY7866_RS17755;Name=STY7866_RS17755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17755;pseudo=true
NZ_CAAR01000496.1	Protein Homology	CDS	4601	5285	.	-	0	ID=cds-STY7866_RS17755;Parent=gene-STY7866_RS17755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458236.1;locus_tag=STY7866_RS17755;product=DUF3251 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000496.1	RefSeq	gene	5773	6135	.	-	.	ID=gene-STY7866_RS17760;Name=STY7866_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17760
NZ_CAAR01000496.1	Protein Homology	CDS	5773	6135	.	-	0	ID=cds-WP_000665687.1;Parent=gene-STY7866_RS17760;Dbxref=Genbank:WP_000665687.1;Name=WP_000665687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458237.1;locus_tag=STY7866_RS17760;product=YibL family ribosome-associated protein;protein_id=WP_000665687.1;transl_table=11
NZ_CAAR01000496.1	RefSeq	gene	6426	6632	.	+	.	ID=gene-STY7866_RS17765;Name=STY7866_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17765
NZ_CAAR01000496.1	Protein Homology	CDS	6426	6632	.	+	0	ID=cds-WP_001062561.1;Parent=gene-STY7866_RS17765;Dbxref=Genbank:WP_001062561.1;Name=WP_001062561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458238.1;locus_tag=STY7866_RS17765;product=hypothetical protein;protein_id=WP_001062561.1;transl_table=11
NZ_CAAR01000496.1	RefSeq	gene	6642	7232	.	-	.	ID=gene-STY7866_RS17770;Name=STY7866_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17770
NZ_CAAR01000496.1	Protein Homology	CDS	6642	7232	.	-	0	ID=cds-WP_000193201.1;Parent=gene-STY7866_RS17770;Dbxref=Genbank:WP_000193201.1;Name=WP_000193201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458239.1;locus_tag=STY7866_RS17770;product=MltR family transcriptional regulator;protein_id=WP_000193201.1;transl_table=11
NZ_CAAR01000496.1	RefSeq	pseudogene	7229	8023	.	-	.	ID=gene-STY7866_RS17775;Name=STY7866_RS17775;end_range=8023,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17775;partial=true;pseudo=true
NZ_CAAR01000496.1	Protein Homology	CDS	7229	8023	.	-	1	ID=cds-STY7866_RS17775;Parent=gene-STY7866_RS17775;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=8023,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458240.1;locus_tag=STY7866_RS17775;partial=true;product=mannitol-1-phosphate 5-dehydrogenase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000495.1 1 8349
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000495.1	RefSeq	region	1	8349	.	+	.	ID=NZ_CAAR01000495.1:1..8349;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000495.1	RefSeq	gene	1	1175	.	+	.	ID=gene-STY7866_RS17700;Name=STY7866_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17700;partial=true;start_range=.,1
NZ_CAAR01000495.1	Protein Homology	CDS	1	1175	.	+	2	ID=cds-WP_000316588.1;Parent=gene-STY7866_RS17700;Dbxref=Genbank:WP_000316588.1;Name=WP_000316588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456836.1;locus_tag=STY7866_RS17700;partial=true;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000316588.1;start_range=.,1;transl_table=11
NZ_CAAR01000495.1	RefSeq	pseudogene	1425	2206	.	+	.	ID=gene-STY7866_RS17705;Name=STY7866_RS17705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17705;pseudo=true
NZ_CAAR01000495.1	Protein Homology	CDS	1425	2206	.	+	0	ID=cds-STY7866_RS17705;Parent=gene-STY7866_RS17705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456835.1;locus_tag=STY7866_RS17705;product=IclR family transcriptional regulator;pseudo=true;transl_table=11
NZ_CAAR01000495.1	RefSeq	gene	2220	3425	.	+	.	ID=gene-STY7866_RS17710;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=STY7866_RS17710
NZ_CAAR01000495.1	Protein Homology	CDS	2220	3425	.	+	0	ID=cds-WP_001530644.1;Parent=gene-STY7866_RS17710;Dbxref=Genbank:WP_001530644.1;Name=WP_001530644.1;gbkey=CDS;gene=rhmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=STY7866_RS17710;product=L-rhamnonate dehydratase;protein_id=WP_001530644.1;transl_table=11
NZ_CAAR01000495.1	RefSeq	gene	3481	4770	.	+	.	ID=gene-STY7866_RS17715;Name=STY7866_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17715
NZ_CAAR01000495.1	Protein Homology	CDS	3481	4770	.	+	0	ID=cds-WP_000028931.1;Parent=gene-STY7866_RS17715;Dbxref=Genbank:WP_000028931.1;Name=WP_000028931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456833.1;locus_tag=STY7866_RS17715;product=MFS transporter;protein_id=WP_000028931.1;transl_table=11
NZ_CAAR01000495.1	RefSeq	gene	4796	5599	.	+	.	ID=gene-STY7866_RS17720;Name=STY7866_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17720
NZ_CAAR01000495.1	Protein Homology	CDS	4796	5599	.	+	0	ID=cds-WP_000992948.1;Parent=gene-STY7866_RS17720;Dbxref=Genbank:WP_000992948.1;Name=WP_000992948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456832.1;locus_tag=STY7866_RS17720;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_000992948.1;transl_table=11
NZ_CAAR01000495.1	RefSeq	gene	5605	5781	.	+	.	ID=gene-STY7866_RS27645;Name=STY7866_RS27645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27645
NZ_CAAR01000495.1	Protein Homology	CDS	5605	5781	.	+	0	ID=cds-WP_001112766.1;Parent=gene-STY7866_RS27645;Dbxref=Genbank:WP_001112766.1;Name=WP_001112766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=STY7866_RS27645;product=hypothetical protein;protein_id=WP_001112766.1;transl_table=11
NZ_CAAR01000495.1	RefSeq	pseudogene	5868	6820	.	-	.	ID=gene-STY7866_RS17730;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=pseudogene;locus_tag=STY7866_RS17730;pseudo=true
NZ_CAAR01000495.1	Protein Homology	CDS	5868	6820	.	-	0	ID=cds-STY7866_RS17730;Parent=gene-STY7866_RS17730;Note=frameshifted;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456831.1;locus_tag=STY7866_RS17730;product=SPI-2 type III secretion system effector deubiquitinase SseL;pseudo=true;transl_table=11
NZ_CAAR01000495.1	RefSeq	gene	7315	8349	.	-	.	ID=gene-STY7866_RS17740;Name=glpC;end_range=8349,.;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=STY7866_RS17740;partial=true
NZ_CAAR01000495.1	Protein Homology	CDS	7315	8349	.	-	0	ID=cds-WP_000674112.1;Parent=gene-STY7866_RS17740;Dbxref=Genbank:WP_000674112.1;Name=WP_000674112.1;end_range=8349,.;gbkey=CDS;gene=glpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456829.1;locus_tag=STY7866_RS17740;partial=true;product=anaerobic glycerol-3-phosphate dehydrogenase subunit C;protein_id=WP_000674112.1;transl_table=11
##sequence-region NZ_CAAR01000494.1 1 818
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000494.1	RefSeq	region	1	818	.	+	.	ID=NZ_CAAR01000494.1:1..818;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000494.1	RefSeq	pseudogene	1	327	.	-	.	ID=gene-STY7866_RS17690;Name=STY7866_RS17690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17690;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000494.1	Protein Homology	CDS	1	327	.	-	0	ID=cds-STY7866_RS17690;Parent=gene-STY7866_RS17690;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455825.1;locus_tag=STY7866_RS17690;partial=true;product=oligopeptide ABC transporter substrate-binding protein OppA;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000494.1	RefSeq	gene	517	818	.	+	.	ID=gene-STY7866_RS17695;Name=mpaA;end_range=818,.;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=STY7866_RS17695;partial=true
NZ_CAAR01000494.1	Protein Homology	CDS	517	818	.	+	0	ID=cds-WP_000219124.1;Parent=gene-STY7866_RS17695;Dbxref=Genbank:WP_000219124.1;Name=WP_000219124.1;end_range=818,.;gbkey=CDS;gene=mpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455824.1;locus_tag=STY7866_RS17695;partial=true;product=murein tripeptide amidase MpaA;protein_id=WP_000219124.1;transl_table=11
##sequence-region NZ_CAAR01000493.1 1 1839
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000493.1	RefSeq	region	1	1839	.	+	.	ID=NZ_CAAR01000493.1:1..1839;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000493.1	RefSeq	gene	1	649	.	+	.	ID=gene-STY7866_RS17680;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=STY7866_RS17680;partial=true;start_range=.,1
NZ_CAAR01000493.1	Protein Homology	CDS	1	649	.	+	1	ID=cds-WP_000303600.1;Parent=gene-STY7866_RS17680;Dbxref=Genbank:WP_000303600.1;Name=WP_000303600.1;gbkey=CDS;gene=proC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454981.1;locus_tag=STY7866_RS17680;partial=true;product=pyrroline-5-carboxylate reductase;protein_id=WP_000303600.1;start_range=.,1;transl_table=11
NZ_CAAR01000493.1	RefSeq	gene	664	1776	.	-	.	ID=gene-STY7866_RS17685;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=STY7866_RS17685
NZ_CAAR01000493.1	Protein Homology	CDS	664	1776	.	-	0	ID=cds-WP_000484099.1;Parent=gene-STY7866_RS17685;Dbxref=Genbank:WP_000484099.1;Name=WP_000484099.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454980.1;locus_tag=STY7866_RS17685;product=diguanylate cyclase AdrA;protein_id=WP_000484099.1;transl_table=11
##sequence-region NZ_CAAR01000492.1 1 2888
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000492.1	RefSeq	region	1	2888	.	+	.	ID=NZ_CAAR01000492.1:1..2888;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000492.1	RefSeq	gene	1	538	.	-	.	ID=gene-STY7866_RS17660;Name=STY7866_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17660;partial=true;start_range=.,1
NZ_CAAR01000492.1	Protein Homology	CDS	1	538	.	-	0	ID=cds-WP_000818967.1;Parent=gene-STY7866_RS17660;Dbxref=Genbank:WP_000818967.1;Name=WP_000818967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457107.1;locus_tag=STY7866_RS17660;partial=true;product=pyridoxine 5'-phosphate synthase;protein_id=WP_000818967.1;start_range=.,1;transl_table=11
NZ_CAAR01000492.1	RefSeq	gene	612	1277	.	-	.	ID=gene-STY7866_RS17665;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=STY7866_RS17665
NZ_CAAR01000492.1	Protein Homology	CDS	612	1277	.	-	0	ID=cds-WP_001764842.1;Parent=gene-STY7866_RS17665;Dbxref=Genbank:WP_001764842.1;Name=WP_001764842.1;gbkey=CDS;gene=recO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001722769.1;locus_tag=STY7866_RS17665;product=DNA repair protein RecO;protein_id=WP_001764842.1;transl_table=11
NZ_CAAR01000492.1	RefSeq	gene	1289	2194	.	-	.	ID=gene-STY7866_RS17670;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=STY7866_RS17670
NZ_CAAR01000492.1	Protein Homology	CDS	1289	2194	.	-	0	ID=cds-WP_000102231.1;Parent=gene-STY7866_RS17670;Dbxref=Genbank:WP_000102231.1;Name=WP_000102231.1;gbkey=CDS;gene=era;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457109.1;locus_tag=STY7866_RS17670;product=GTPase Era;protein_id=WP_000102231.1;transl_table=11
NZ_CAAR01000492.1	RefSeq	gene	2191	2871	.	-	.	ID=gene-STY7866_RS17675;Name=STY7866_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17675
NZ_CAAR01000492.1	Protein Homology	CDS	2191	2871	.	-	0	ID=cds-WP_001068341.1;Parent=gene-STY7866_RS17675;Dbxref=Genbank:WP_001068341.1;Name=WP_001068341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848606.1;locus_tag=STY7866_RS17675;product=ribonuclease III;protein_id=WP_001068341.1;transl_table=11
##sequence-region NZ_CAAR01000491.1 1 5739
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000491.1	RefSeq	region	1	5739	.	+	.	ID=NZ_CAAR01000491.1:1..5739;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000491.1	RefSeq	gene	1	697	.	-	.	ID=gene-STY7866_RS17615;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=STY7866_RS17615;partial=true;start_range=.,1
NZ_CAAR01000491.1	Protein Homology	CDS	1	697	.	-	0	ID=cds-WP_000625849.1;Parent=gene-STY7866_RS17615;Dbxref=Genbank:WP_000625849.1;Name=WP_000625849.1;gbkey=CDS;gene=flgG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=STY7866_RS17615;partial=true;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625849.1;start_range=.,1;transl_table=11
NZ_CAAR01000491.1	RefSeq	gene	711	1466	.	-	.	ID=gene-STY7866_RS17620;Name=STY7866_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17620
NZ_CAAR01000491.1	Protein Homology	CDS	711	1466	.	-	0	ID=cds-WP_000349284.1;Parent=gene-STY7866_RS17620;Dbxref=Genbank:WP_000349284.1;Name=WP_000349284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455671.1;locus_tag=STY7866_RS17620;product=flagellar basal body rod protein FlgF;protein_id=WP_000349284.1;transl_table=11
NZ_CAAR01000491.1	RefSeq	gene	1487	2698	.	-	.	ID=gene-STY7866_RS17625;Name=STY7866_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17625
NZ_CAAR01000491.1	Protein Homology	CDS	1487	2698	.	-	0	ID=cds-WP_000010567.1;Parent=gene-STY7866_RS17625;Dbxref=Genbank:WP_000010567.1;Name=WP_000010567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455670.1;locus_tag=STY7866_RS17625;product=flagellar hook protein FlgE;protein_id=WP_000010567.1;transl_table=11
NZ_CAAR01000491.1	RefSeq	gene	2725	3423	.	-	.	ID=gene-STY7866_RS17630;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=STY7866_RS17630
NZ_CAAR01000491.1	Protein Homology	CDS	2725	3423	.	-	0	ID=cds-WP_000020450.1;Parent=gene-STY7866_RS17630;Dbxref=Genbank:WP_000020450.1;Name=WP_000020450.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455669.1;locus_tag=STY7866_RS17630;product=flagellar hook assembly protein FlgD;protein_id=WP_000020450.1;transl_table=11
NZ_CAAR01000491.1	RefSeq	gene	3435	3839	.	-	.	ID=gene-STY7866_RS17635;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=STY7866_RS17635
NZ_CAAR01000491.1	Protein Homology	CDS	3435	3839	.	-	0	ID=cds-WP_001196448.1;Parent=gene-STY7866_RS17635;Dbxref=Genbank:WP_001196448.1;Name=WP_001196448.1;gbkey=CDS;gene=flgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=STY7866_RS17635;product=flagellar basal body rod protein FlgC;protein_id=WP_001196448.1;transl_table=11
NZ_CAAR01000491.1	RefSeq	gene	3843	4259	.	-	.	ID=gene-STY7866_RS17640;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=STY7866_RS17640
NZ_CAAR01000491.1	Protein Homology	CDS	3843	4259	.	-	0	ID=cds-WP_000887042.1;Parent=gene-STY7866_RS17640;Dbxref=Genbank:WP_000887042.1;Name=WP_000887042.1;gbkey=CDS;gene=flgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455667.1;locus_tag=STY7866_RS17640;product=flagellar basal body rod protein FlgB;protein_id=WP_000887042.1;transl_table=11
NZ_CAAR01000491.1	RefSeq	gene	4416	5075	.	+	.	ID=gene-STY7866_RS17645;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=STY7866_RS17645
NZ_CAAR01000491.1	Protein Homology	CDS	4416	5075	.	+	0	ID=cds-WP_001194076.1;Parent=gene-STY7866_RS17645;Dbxref=Genbank:WP_001194076.1;Name=WP_001194076.1;gbkey=CDS;gene=flgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455666.1;locus_tag=STY7866_RS17645;product=flagellar basal body P-ring formation protein FlgA;protein_id=WP_001194076.1;transl_table=11
NZ_CAAR01000491.1	RefSeq	gene	5167	5460	.	+	.	ID=gene-STY7866_RS17650;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=STY7866_RS17650
NZ_CAAR01000491.1	Protein Homology	CDS	5167	5460	.	+	0	ID=cds-WP_000020892.1;Parent=gene-STY7866_RS17650;Dbxref=Genbank:WP_000020892.1;Name=WP_000020892.1;gbkey=CDS;gene=flgM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455665.1;locus_tag=STY7866_RS17650;product=anti-sigma-28 factor FlgM;protein_id=WP_000020892.1;transl_table=11
NZ_CAAR01000491.1	RefSeq	pseudogene	5465	5739	.	+	.	ID=gene-STY7866_RS17655;Name=STY7866_RS17655;end_range=5739,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17655;partial=true;pseudo=true
NZ_CAAR01000491.1	Protein Homology	CDS	5465	5739	.	+	0	ID=cds-STY7866_RS17655;Parent=gene-STY7866_RS17655;Note=export chaperone for FlgK and FlgL%3B frameshifted%3B incomplete%3B missing C-terminus;end_range=5739,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455664.1;locus_tag=STY7866_RS17655;partial=true;product=flagellar biosynthesis protein FlgN;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000490.1 1 792
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000490.1	RefSeq	region	1	792	.	+	.	ID=NZ_CAAR01000490.1:1..792;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000490.1	RefSeq	gene	1	792	.	-	.	ID=gene-STY7866_RS17610;Name=STY7866_RS17610;end_range=792,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17610;partial=true;start_range=.,1
NZ_CAAR01000490.1	Protein Homology	CDS	1	792	.	-	1	ID=cds-WP_000463680.1;Parent=gene-STY7866_RS17610;Dbxref=Genbank:WP_000463680.1;Name=WP_000463680.1;end_range=792,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454898.1;locus_tag=STY7866_RS17610;partial=true;product=hypothetical protein;protein_id=WP_000463680.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000489.1 1 1991
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000489.1	RefSeq	region	1	1991	.	+	.	ID=NZ_CAAR01000489.1:1..1991;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000489.1	RefSeq	gene	12	302	.	+	.	ID=gene-STY7866_RS17585;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=STY7866_RS17585
NZ_CAAR01000489.1	Protein Homology	CDS	12	302	.	+	0	ID=cds-WP_001543083.1;Parent=gene-STY7866_RS17585;Dbxref=Genbank:WP_001543083.1;Name=WP_001543083.1;gbkey=CDS;gene=rpsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014167559.1;locus_tag=STY7866_RS17585;product=30S ribosomal protein S14;protein_id=WP_001543083.1;transl_table=11
NZ_CAAR01000489.1	RefSeq	gene	336	728	.	+	.	ID=gene-STY7866_RS17590;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=STY7866_RS17590
NZ_CAAR01000489.1	Protein Homology	CDS	336	728	.	+	0	ID=cds-WP_000062611.1;Parent=gene-STY7866_RS17590;Dbxref=Genbank:WP_000062611.1;Name=WP_000062611.1;gbkey=CDS;gene=rpsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=STY7866_RS17590;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11
NZ_CAAR01000489.1	RefSeq	gene	741	1274	.	+	.	ID=gene-STY7866_RS17595;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=STY7866_RS17595
NZ_CAAR01000489.1	Protein Homology	CDS	741	1274	.	+	0	ID=cds-WP_000091939.1;Parent=gene-STY7866_RS17595;Dbxref=Genbank:WP_000091939.1;Name=WP_000091939.1;gbkey=CDS;gene=rplF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=STY7866_RS17595;product=50S ribosomal protein L6;protein_id=WP_000091939.1;transl_table=11
NZ_CAAR01000489.1	RefSeq	gene	1284	1637	.	+	.	ID=gene-STY7866_RS17600;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=STY7866_RS17600
NZ_CAAR01000489.1	Protein Homology	CDS	1284	1637	.	+	0	ID=cds-WP_000358956.1;Parent=gene-STY7866_RS17600;Dbxref=Genbank:WP_000358956.1;Name=WP_000358956.1;gbkey=CDS;gene=rplR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=STY7866_RS17600;product=50S ribosomal protein L18;protein_id=WP_000358956.1;transl_table=11
NZ_CAAR01000489.1	RefSeq	gene	1652	1991	.	+	.	ID=gene-STY7866_RS17605;Name=STY7866_RS17605;end_range=1991,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17605;partial=true
NZ_CAAR01000489.1	Protein Homology	CDS	1652	1991	.	+	0	ID=cds-WP_000940119.1;Parent=gene-STY7866_RS17605;Dbxref=Genbank:WP_000940119.1;Name=WP_000940119.1;end_range=1991,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445361.1;locus_tag=STY7866_RS17605;partial=true;product=30S ribosomal protein S5;protein_id=WP_000940119.1;transl_table=11
##sequence-region NZ_CAAR01000488.1 1 892
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000488.1	RefSeq	region	1	892	.	+	.	ID=NZ_CAAR01000488.1:1..892;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000488.1	RefSeq	pseudogene	1	215	.	+	.	ID=gene-STY7866_RS26475;Name=STY7866_RS26475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26475;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000488.1	Protein Homology	CDS	1	215	.	+	2	ID=cds-STY7866_RS26475;Parent=gene-STY7866_RS26475;Note=YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455088.1;locus_tag=STY7866_RS26475;partial=true;product=cation:proton antiport protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000488.1	RefSeq	pseudogene	264	892	.	-	.	ID=gene-STY7866_RS17580;Name=STY7866_RS17580;end_range=892,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17580;partial=true;pseudo=true
NZ_CAAR01000488.1	Protein Homology	CDS	264	892	.	-	2	ID=cds-STY7866_RS17580;Parent=gene-STY7866_RS17580;Note=catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455087.1;locus_tag=STY7866_RS17580;partial=true;product=inosine/guanosine kinase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000487.1 1 3166
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000487.1	RefSeq	region	1	3166	.	+	.	ID=NZ_CAAR01000487.1:1..3166;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000487.1	RefSeq	pseudogene	1	678	.	+	.	ID=gene-STY7866_RS17555;Name=STY7866_RS17555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17555;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000487.1	Protein Homology	CDS	1	678	.	+	0	ID=cds-STY7866_RS17555;Parent=gene-STY7866_RS17555;Note=catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine%3B involved in the maintenance and/or assembly of sulfur clusters%3B periplasmic lipoporotein anchored to the inner membrane%3B part of the thiamine pyrophosphate biosynthesis pathway%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456811.1;locus_tag=STY7866_RS17555;partial=true;product=FAD:protein FMN transferase ApbE;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000487.1	RefSeq	gene	759	1820	.	+	.	ID=gene-STY7866_RS17560;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=STY7866_RS17560
NZ_CAAR01000487.1	Protein Homology	CDS	759	1820	.	+	0	ID=cds-WP_000975974.1;Parent=gene-STY7866_RS17560;Dbxref=Genbank:WP_000975974.1;Name=WP_000975974.1;gbkey=CDS;gene=ada;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456810.1;locus_tag=STY7866_RS17560;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_000975974.1;transl_table=11
NZ_CAAR01000487.1	RefSeq	gene	1823	2473	.	+	.	ID=gene-STY7866_RS17565;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=STY7866_RS17565
NZ_CAAR01000487.1	Protein Homology	CDS	1823	2473	.	+	0	ID=cds-WP_000884984.1;Parent=gene-STY7866_RS17565;Dbxref=Genbank:WP_000884984.1;Name=WP_000884984.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456809.1;locus_tag=STY7866_RS17565;product=DNA oxidative demethylase AlkB;protein_id=WP_000884984.1;transl_table=11
NZ_CAAR01000487.1	RefSeq	pseudogene	2549	3166	.	+	.	ID=gene-STY7866_RS17570;Name=STY7866_RS17570;end_range=3166,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17570;partial=true;pseudo=true
NZ_CAAR01000487.1	Protein Homology	CDS	2549	3166	.	+	0	ID=cds-STY7866_RS17570;Parent=gene-STY7866_RS17570;Note=efflux pump for the antibacterial peptide microcin J25%3B frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3166,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456808.1;locus_tag=STY7866_RS17570;partial=true;product=multidrug ABC transporter permease/ATP-binding protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000486.1 1 802
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000486.1	RefSeq	region	1	802	.	+	.	ID=NZ_CAAR01000486.1:1..802;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000486.1	RefSeq	gene	1	802	.	+	.	ID=gene-STY7866_RS17550;Name=proA;end_range=802,.;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=STY7866_RS17550;partial=true;start_range=.,1
NZ_CAAR01000486.1	Protein Homology	CDS	1	802	.	+	0	ID=cds-WP_000324661.1;Parent=gene-STY7866_RS17550;Dbxref=Genbank:WP_000324661.1;Name=WP_000324661.1;end_range=802,.;gbkey=CDS;gene=proA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454934.1;locus_tag=STY7866_RS17550;partial=true;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_000324661.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000485.1 1 4869
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000485.1	RefSeq	region	1	4869	.	+	.	ID=NZ_CAAR01000485.1:1..4869;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000485.1	RefSeq	pseudogene	1	143	.	+	.	ID=gene-STY7866_RS17525;Name=STY7866_RS17525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17525;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000485.1	Protein Homology	CDS	1	143	.	+	2	ID=cds-STY7866_RS17525;Parent=gene-STY7866_RS17525;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458848.1;locus_tag=STY7866_RS17525;partial=true;product=gamma-glutamylcyclotransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000485.1	RefSeq	gene	197	1405	.	-	.	ID=gene-STY7866_RS17530;Name=STY7866_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17530
NZ_CAAR01000485.1	Protein Homology	CDS	197	1405	.	-	0	ID=cds-WP_000203124.1;Parent=gene-STY7866_RS17530;Dbxref=Genbank:WP_000203124.1;Name=WP_000203124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458849.1;locus_tag=STY7866_RS17530;product=MFS transporter;protein_id=WP_000203124.1;transl_table=11
NZ_CAAR01000485.1	RefSeq	gene	1402	2565	.	-	.	ID=gene-STY7866_RS17535;Name=STY7866_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17535
NZ_CAAR01000485.1	Protein Homology	CDS	1402	2565	.	-	0	ID=cds-WP_000977198.1;Parent=gene-STY7866_RS17535;Dbxref=Genbank:WP_000977198.1;Name=WP_000977198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458850.1;locus_tag=STY7866_RS17535;product=metallo-dependent hydrolase;protein_id=WP_000977198.1;transl_table=11
NZ_CAAR01000485.1	RefSeq	gene	2975	3505	.	-	.	ID=gene-STY7866_RS17540;Name=STY7866_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17540
NZ_CAAR01000485.1	Protein Homology	CDS	2975	3505	.	-	0	ID=cds-WP_000055079.1;Parent=gene-STY7866_RS17540;Dbxref=Genbank:WP_000055079.1;Name=WP_000055079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434187.1;locus_tag=STY7866_RS17540;product=inorganic diphosphatase;protein_id=WP_000055079.1;transl_table=11
NZ_CAAR01000485.1	RefSeq	gene	3732	4730	.	-	.	ID=gene-STY7866_RS17545;Name=STY7866_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17545
NZ_CAAR01000485.1	Protein Homology	CDS	3732	4730	.	-	0	ID=cds-WP_000853761.1;Parent=gene-STY7866_RS17545;Dbxref=Genbank:WP_000853761.1;Name=WP_000853761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=STY7866_RS17545;product=class 1 fructose-bisphosphatase;protein_id=WP_000853761.1;transl_table=11
##sequence-region NZ_CAAR01000484.1 1 2593
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000484.1	RefSeq	region	1	2593	.	+	.	ID=NZ_CAAR01000484.1:1..2593;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000484.1	RefSeq	pseudogene	1	504	.	+	.	ID=gene-STY7866_RS17500;Name=STY7866_RS17500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17500;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000484.1	Protein Homology	CDS	1	504	.	+	0	ID=cds-STY7866_RS17500;Parent=gene-STY7866_RS17500;Note=P-type%3B involved in magnesium transport into the cytoplasm%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458874.1;locus_tag=STY7866_RS17500;partial=true;product=magnesium-translocating P-type ATPase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000484.1	RefSeq	gene	620	1066	.	-	.	ID=gene-STY7866_RS17505;Name=STY7866_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17505
NZ_CAAR01000484.1	Protein Homology	CDS	620	1066	.	-	0	ID=cds-WP_000251083.1;Parent=gene-STY7866_RS17505;Dbxref=Genbank:WP_000251083.1;Name=WP_000251083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458875.1;locus_tag=STY7866_RS17505;product=transposase;protein_id=WP_000251083.1;transl_table=11
NZ_CAAR01000484.1	RefSeq	gene	1141	1527	.	-	.	ID=gene-STY7866_RS17510;Name=STY7866_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17510
NZ_CAAR01000484.1	Protein Homology	CDS	1141	1527	.	-	0	ID=cds-WP_000047544.1;Parent=gene-STY7866_RS17510;Dbxref=Genbank:WP_000047544.1;Name=WP_000047544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458876.1;locus_tag=STY7866_RS17510;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047544.1;transl_table=11
NZ_CAAR01000484.1	RefSeq	gene	1604	2065	.	-	.	ID=gene-STY7866_RS17515;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=STY7866_RS17515
NZ_CAAR01000484.1	Protein Homology	CDS	1604	2065	.	-	0	ID=cds-WP_000148566.1;Parent=gene-STY7866_RS17515;Dbxref=Genbank:WP_000148566.1;Name=WP_000148566.1;gbkey=CDS;gene=pyrI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=STY7866_RS17515;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148566.1;transl_table=11
NZ_CAAR01000484.1	RefSeq	pseudogene	2078	2593	.	-	.	ID=gene-STY7866_RS17520;Name=STY7866_RS17520;end_range=2593,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17520;partial=true;pseudo=true
NZ_CAAR01000484.1	Protein Homology	CDS	2078	2593	.	-	0	ID=cds-STY7866_RS17520;Parent=gene-STY7866_RS17520;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2593,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458878.1;locus_tag=STY7866_RS17520;partial=true;product=aspartate carbamoyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000483.1 1 3787
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000483.1	RefSeq	region	1	3787	.	+	.	ID=NZ_CAAR01000483.1:1..3787;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000483.1	RefSeq	pseudogene	1	155	.	-	.	ID=gene-STY7866_RS27635;Name=STY7866_RS27635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27635;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000483.1	Protein Homology	CDS	1	155	.	-	0	ID=cds-STY7866_RS27635;Parent=gene-STY7866_RS27635;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=STY7866_RS27635;partial=true;product=ATP-dependent Clp protease proteolytic subunit;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000483.1	RefSeq	gene	402	1700	.	-	.	ID=gene-STY7866_RS17480;Name=STY7866_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17480
NZ_CAAR01000483.1	Protein Homology	CDS	402	1700	.	-	0	ID=cds-WP_001198406.1;Parent=gene-STY7866_RS17480;Dbxref=Genbank:WP_001198406.1;Name=WP_001198406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=STY7866_RS17480;product=trigger factor;protein_id=WP_001198406.1;transl_table=11
NZ_CAAR01000483.1	RefSeq	pseudogene	1655	1848	.	-	.	ID=gene-STY7866_RS27640;Name=STY7866_RS27640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27640;pseudo=true
NZ_CAAR01000483.1	Protein Homology	CDS	1655	1848	.	-	0	ID=cds-STY7866_RS27640;Parent=gene-STY7866_RS27640;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001007318.1;locus_tag=STY7866_RS27640;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000483.1	RefSeq	gene	2047	2364	.	-	.	ID=gene-STY7866_RS17485;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=STY7866_RS17485
NZ_CAAR01000483.1	Protein Homology	CDS	2047	2364	.	-	0	ID=cds-WP_000973433.1;Parent=gene-STY7866_RS17485;Dbxref=Genbank:WP_000973433.1;Name=WP_000973433.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455043.1;locus_tag=STY7866_RS17485;product=transcriptional regulator BolA;protein_id=WP_000973433.1;transl_table=11
NZ_CAAR01000483.1	RefSeq	gene	2668	3246	.	+	.	ID=gene-STY7866_RS17490;Name=STY7866_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17490
NZ_CAAR01000483.1	Protein Homology	CDS	2668	3246	.	+	0	ID=cds-WP_001539323.1;Parent=gene-STY7866_RS17490;Dbxref=Genbank:WP_001539323.1;Name=WP_001539323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455042.1;locus_tag=STY7866_RS17490;product=lipoprotein;protein_id=WP_001539323.1;transl_table=11
NZ_CAAR01000483.1	RefSeq	gene	3290	3787	.	+	.	ID=gene-STY7866_RS17495;Name=STY7866_RS17495;end_range=3787,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17495;partial=true
NZ_CAAR01000483.1	Protein Homology	CDS	3290	3787	.	+	0	ID=cds-WP_000098465.1;Parent=gene-STY7866_RS17495;Dbxref=Genbank:WP_000098465.1;Name=WP_000098465.1;end_range=3787,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455041.1;locus_tag=STY7866_RS17495;partial=true;product=MFS transporter;protein_id=WP_000098465.1;transl_table=11
##sequence-region NZ_CAAR01000482.1 1 3680
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000482.1	RefSeq	region	1	3680	.	+	.	ID=NZ_CAAR01000482.1:1..3680;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000482.1	RefSeq	gene	1	1764	.	+	.	ID=gene-STY7866_RS17455;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=STY7866_RS17455;partial=true;start_range=.,1
NZ_CAAR01000482.1	Protein Homology	CDS	1	1764	.	+	0	ID=cds-WP_000314521.1;Parent=gene-STY7866_RS17455;Dbxref=Genbank:WP_000314521.1;Name=WP_000314521.1;gbkey=CDS;gene=phsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456613.1;locus_tag=STY7866_RS17455;partial=true;product=thiosulfate reductase PhsA;protein_id=WP_000314521.1;start_range=.,1;transl_table=11
NZ_CAAR01000482.1	RefSeq	gene	1779	2357	.	+	.	ID=gene-STY7866_RS17460;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=STY7866_RS17460
NZ_CAAR01000482.1	Protein Homology	CDS	1779	2357	.	+	0	ID=cds-WP_001016236.1;Parent=gene-STY7866_RS17460;Dbxref=Genbank:WP_001016236.1;Name=WP_001016236.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456612.1;locus_tag=STY7866_RS17460;product=thiosulfate reductase electron transport protein PhsB;protein_id=WP_001016236.1;transl_table=11
NZ_CAAR01000482.1	RefSeq	gene	2354	3118	.	+	.	ID=gene-STY7866_RS17465;Name=STY7866_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17465
NZ_CAAR01000482.1	Protein Homology	CDS	2354	3118	.	+	0	ID=cds-WP_001092553.1;Parent=gene-STY7866_RS17465;Dbxref=Genbank:WP_001092553.1;Name=WP_001092553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456611.1;locus_tag=STY7866_RS17465;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001092553.1;transl_table=11
NZ_CAAR01000482.1	RefSeq	gene	3242	3680	.	+	.	ID=gene-STY7866_RS17470;Name=STY7866_RS17470;end_range=3680,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17470;partial=true
NZ_CAAR01000482.1	Protein Homology	CDS	3242	3680	.	+	0	ID=cds-WP_000925037.1;Parent=gene-STY7866_RS17470;Dbxref=Genbank:WP_000925037.1;Name=WP_000925037.1;end_range=3680,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=STY7866_RS17470;partial=true;product=hypothetical protein;protein_id=WP_000925037.1;transl_table=11
##sequence-region NZ_CAAR01000481.1 1 2669
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000481.1	RefSeq	region	1	2669	.	+	.	ID=NZ_CAAR01000481.1:1..2669;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000481.1	RefSeq	gene	1	782	.	-	.	ID=gene-STY7866_RS17440;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=STY7866_RS17440;partial=true;start_range=.,1
NZ_CAAR01000481.1	Protein Homology	CDS	1	782	.	-	0	ID=cds-WP_000235644.1;Parent=gene-STY7866_RS17440;Dbxref=Genbank:WP_000235644.1;Name=WP_000235644.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454719.1;locus_tag=STY7866_RS17440;partial=true;product=thiamine/thiamine pyrophosphate ABC transporter%2C permease protein;protein_id=WP_000235644.1;start_range=.,1;transl_table=11
NZ_CAAR01000481.1	RefSeq	gene	758	1741	.	-	.	ID=gene-STY7866_RS17445;Name=STY7866_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17445
NZ_CAAR01000481.1	Protein Homology	CDS	758	1741	.	-	0	ID=cds-WP_000915326.1;Parent=gene-STY7866_RS17445;Dbxref=Genbank:WP_000915326.1;Name=WP_000915326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454720.1;locus_tag=STY7866_RS17445;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_000915326.1;transl_table=11
NZ_CAAR01000481.1	cmsearch	riboswitch	1773	1872	.	-	.	ID=id-NZ_CAAR01000481.1:1773..1872;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_CAAR01000481.1	RefSeq	pseudogene	1919	2669	.	-	.	ID=gene-STY7866_RS17450;Name=STY7866_RS17450;end_range=2669,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17450;partial=true;pseudo=true
NZ_CAAR01000481.1	Protein Homology	CDS	1919	2669	.	-	1	ID=cds-STY7866_RS17450;Parent=gene-STY7866_RS17450;Note=activates sgrS under glucose-phosphate stress conditions%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2669,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454721.1;locus_tag=STY7866_RS17450;partial=true;product=transcriptional regulator SgrR;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000480.1 1 3521
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000480.1	RefSeq	region	1	3521	.	+	.	ID=NZ_CAAR01000480.1:1..3521;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000480.1	RefSeq	pseudogene	1	1133	.	-	.	ID=gene-STY7866_RS17420;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=pseudogene;locus_tag=STY7866_RS17420;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000480.1	Protein Homology	CDS	1	1133	.	-	0	ID=cds-STY7866_RS17420;Parent=gene-STY7866_RS17420;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=STY7866_RS17420;partial=true;product=two-component system sensor histidine kinase TtrS;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000480.1	RefSeq	gene	1297	2049	.	+	.	ID=gene-STY7866_RS17425;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=STY7866_RS17425
NZ_CAAR01000480.1	Protein Homology	CDS	1297	2049	.	+	0	ID=cds-WP_000269830.1;Parent=gene-STY7866_RS17425;Dbxref=Genbank:WP_000269830.1;Name=WP_000269830.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456142.1;locus_tag=STY7866_RS17425;product=tetrathionate reductase subunit TtrB;protein_id=WP_000269830.1;transl_table=11
NZ_CAAR01000480.1	RefSeq	gene	2050	3072	.	+	.	ID=gene-STY7866_RS17430;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=STY7866_RS17430
NZ_CAAR01000480.1	Protein Homology	CDS	2050	3072	.	+	0	ID=cds-WP_000149765.1;Parent=gene-STY7866_RS17430;Dbxref=Genbank:WP_000149765.1;Name=WP_000149765.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456143.1;locus_tag=STY7866_RS17430;product=tetrathionate reductase subunit TtrC;protein_id=WP_000149765.1;transl_table=11
NZ_CAAR01000480.1	RefSeq	pseudogene	3065	3521	.	+	.	ID=gene-STY7866_RS17435;Name=STY7866_RS17435;end_range=3521,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17435;partial=true;pseudo=true
NZ_CAAR01000480.1	Protein Homology	CDS	3065	3521	.	+	0	ID=cds-STY7866_RS17435;Parent=gene-STY7866_RS17435;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3521,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456144.1;locus_tag=STY7866_RS17435;partial=true;product=tetrathionate reductase subunit TtrA;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000479.1 1 4251
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000479.1	RefSeq	region	1	4251	.	+	.	ID=NZ_CAAR01000479.1:1..4251;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000479.1	RefSeq	pseudogene	1	146	.	+	.	ID=gene-STY7866_RS17380;Name=STY7866_RS17380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17380;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000479.1	Protein Homology	CDS	1	146	.	+	2	ID=cds-STY7866_RS17380;Parent=gene-STY7866_RS17380;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456029.1;locus_tag=STY7866_RS17380;partial=true;product=phage virion morphogenesis protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000479.1	RefSeq	gene	361	1476	.	+	.	ID=gene-STY7866_RS17385;Name=STY7866_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17385
NZ_CAAR01000479.1	Protein Homology	CDS	361	1476	.	+	0	ID=cds-WP_001273072.1;Parent=gene-STY7866_RS17385;Dbxref=Genbank:WP_001273072.1;Name=WP_001273072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456030.1;locus_tag=STY7866_RS17385;product=hypothetical protein;protein_id=WP_001273072.1;transl_table=11
NZ_CAAR01000479.1	RefSeq	gene	1491	2444	.	+	.	ID=gene-STY7866_RS17390;Name=STY7866_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17390
NZ_CAAR01000479.1	Protein Homology	CDS	1491	2444	.	+	0	ID=cds-WP_001286904.1;Parent=gene-STY7866_RS17390;Dbxref=Genbank:WP_001286904.1;Name=WP_001286904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456031.1;locus_tag=STY7866_RS17390;product=hypothetical protein;protein_id=WP_001286904.1;transl_table=11
NZ_CAAR01000479.1	RefSeq	pseudogene	2454	2791	.	+	.	ID=gene-STY7866_RS17395;Name=STY7866_RS17395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17395;pseudo=true
NZ_CAAR01000479.1	Protein Homology	CDS	2454	2791	.	+	0	ID=cds-STY7866_RS17395;Parent=gene-STY7866_RS17395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456032.1;locus_tag=STY7866_RS17395;product=DUF2190 family protein;pseudo=true;transl_table=11
NZ_CAAR01000479.1	RefSeq	gene	2793	3239	.	+	.	ID=gene-STY7866_RS17400;Name=STY7866_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17400
NZ_CAAR01000479.1	Protein Homology	CDS	2793	3239	.	+	0	ID=cds-WP_000271668.1;Parent=gene-STY7866_RS17400;Dbxref=Genbank:WP_000271668.1;Name=WP_000271668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456033.1;locus_tag=STY7866_RS17400;product=DUF1320 domain-containing protein;protein_id=WP_000271668.1;transl_table=11
NZ_CAAR01000479.1	RefSeq	gene	3239	3703	.	+	.	ID=gene-STY7866_RS17405;Name=STY7866_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17405
NZ_CAAR01000479.1	Protein Homology	CDS	3239	3703	.	+	0	ID=cds-WP_001101804.1;Parent=gene-STY7866_RS17405;Dbxref=Genbank:WP_001101804.1;Name=WP_001101804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456034.1;locus_tag=STY7866_RS17405;product=hypothetical protein;protein_id=WP_001101804.1;transl_table=11
NZ_CAAR01000479.1	RefSeq	gene	3700	3954	.	+	.	ID=gene-STY7866_RS17410;Name=STY7866_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17410
NZ_CAAR01000479.1	Protein Homology	CDS	3700	3954	.	+	0	ID=cds-WP_001789770.1;Parent=gene-STY7866_RS17410;Dbxref=Genbank:WP_001789770.1;Name=WP_001789770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001789770.1;locus_tag=STY7866_RS17410;product=hypothetical protein;protein_id=WP_001789770.1;transl_table=11
NZ_CAAR01000479.1	RefSeq	pseudogene	3944	4251	.	+	.	ID=gene-STY7866_RS17415;Name=STY7866_RS17415;end_range=4251,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17415;partial=true;pseudo=true
NZ_CAAR01000479.1	Protein Homology	CDS	3944	4251	.	+	0	ID=cds-STY7866_RS17415;Parent=gene-STY7866_RS17415;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4251,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456036.1;locus_tag=STY7866_RS17415;partial=true;product=phage tail sheath family protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000478.1 1 4300
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000478.1	RefSeq	region	1	4300	.	+	.	ID=NZ_CAAR01000478.1:1..4300;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000478.1	RefSeq	gene	1	1253	.	+	.	ID=gene-STY7866_RS17355;Name=STY7866_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17355;partial=true;start_range=.,1
NZ_CAAR01000478.1	Protein Homology	CDS	1	1253	.	+	2	ID=cds-WP_000674940.1;Parent=gene-STY7866_RS17355;Dbxref=Genbank:WP_000674940.1;Name=WP_000674940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456573.1;locus_tag=STY7866_RS17355;partial=true;product=cobyric acid synthase;protein_id=WP_000674940.1;start_range=.,1;transl_table=11
NZ_CAAR01000478.1	RefSeq	gene	1250	1795	.	+	.	ID=gene-STY7866_RS17360;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=STY7866_RS17360
NZ_CAAR01000478.1	Protein Homology	CDS	1250	1795	.	+	0	ID=cds-WP_000973185.1;Parent=gene-STY7866_RS17360;Dbxref=Genbank:WP_000973185.1;Name=WP_000973185.1;gbkey=CDS;gene=cobU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456572.1;locus_tag=STY7866_RS17360;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973185.1;transl_table=11
NZ_CAAR01000478.1	RefSeq	pseudogene	1792	2534	.	+	.	ID=gene-STY7866_RS17365;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=pseudogene;locus_tag=STY7866_RS17365;pseudo=true
NZ_CAAR01000478.1	Protein Homology	CDS	1792	2534	.	+	0	ID=cds-STY7866_RS17365;Parent=gene-STY7866_RS17365;Note=frameshifted;gbkey=CDS;gene=cobS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456571.1;locus_tag=STY7866_RS17365;product=adenosylcobinamide-GDP ribazoletransferase;pseudo=true;transl_table=11
NZ_CAAR01000478.1	RefSeq	gene	2561	3631	.	+	.	ID=gene-STY7866_RS17370;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=STY7866_RS17370
NZ_CAAR01000478.1	Protein Homology	CDS	2561	3631	.	+	0	ID=cds-WP_001193966.1;Parent=gene-STY7866_RS17370;Dbxref=Genbank:WP_001193966.1;Name=WP_001193966.1;gbkey=CDS;gene=cobT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456570.1;locus_tag=STY7866_RS17370;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001193966.1;transl_table=11
NZ_CAAR01000478.1	RefSeq	pseudogene	3684	4300	.	+	.	ID=gene-STY7866_RS17375;Name=STY7866_RS17375;end_range=4300,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17375;partial=true;pseudo=true
NZ_CAAR01000478.1	Protein Homology	CDS	3684	4300	.	+	0	ID=cds-STY7866_RS17375;Parent=gene-STY7866_RS17375;Note=catalyzes th removal of D-alanine and attachment of the murein lipoprotein to the peptidoglycan tetrapeptide chain%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4300,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001255206.1;locus_tag=STY7866_RS17375;partial=true;product=L%2CD-transpeptidase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000477.1 1 237
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000477.1	RefSeq	region	1	237	.	+	.	ID=NZ_CAAR01000477.1:1..237;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000477.1	RefSeq	gene	41	116	.	+	.	ID=gene-STY7866_RS17345;Name=STY7866_RS17345;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS17345
NZ_CAAR01000477.1	tRNAscan-SE	tRNA	41	116	.	+	.	ID=rna-STY7866_RS17345;Parent=gene-STY7866_RS17345;anticodon=(pos:74..76);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS17345;product=tRNA-Val
NZ_CAAR01000477.1	tRNAscan-SE	exon	41	116	.	+	.	ID=exon-STY7866_RS17345-1;Parent=rna-STY7866_RS17345;anticodon=(pos:74..76);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS17345;product=tRNA-Val
NZ_CAAR01000477.1	RefSeq	gene	158	233	.	+	.	ID=gene-STY7866_RS17350;Name=STY7866_RS17350;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS17350
NZ_CAAR01000477.1	tRNAscan-SE	tRNA	158	233	.	+	.	ID=rna-STY7866_RS17350;Parent=gene-STY7866_RS17350;anticodon=(pos:191..193);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS17350;product=tRNA-Val
NZ_CAAR01000477.1	tRNAscan-SE	exon	158	233	.	+	.	ID=exon-STY7866_RS17350-1;Parent=rna-STY7866_RS17350;anticodon=(pos:191..193);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS17350;product=tRNA-Val
##sequence-region NZ_CAAR01000476.1 1 1040
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000476.1	RefSeq	region	1	1040	.	+	.	ID=NZ_CAAR01000476.1:1..1040;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000476.1	RefSeq	gene	243	1040	.	+	.	ID=gene-STY7866_RS17340;Name=gltX;end_range=1040,.;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=STY7866_RS17340;partial=true
NZ_CAAR01000476.1	Protein Homology	CDS	243	1040	.	+	0	ID=cds-WP_000695618.1;Parent=gene-STY7866_RS17340;Dbxref=Genbank:WP_000695618.1;Name=WP_000695618.1;end_range=1040,.;gbkey=CDS;gene=gltX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695624.1;locus_tag=STY7866_RS17340;partial=true;product=glutamate--tRNA ligase;protein_id=WP_000695618.1;transl_table=11
##sequence-region NZ_CAAR01000475.1 1 725
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000475.1	RefSeq	region	1	725	.	+	.	ID=NZ_CAAR01000475.1:1..725;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000475.1	RefSeq	gene	52	725	.	-	.	ID=gene-STY7866_RS17335;Name=STY7866_RS17335;end_range=725,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17335;partial=true
NZ_CAAR01000475.1	Protein Homology	CDS	52	725	.	-	2	ID=cds-WP_000331050.1;Parent=gene-STY7866_RS17335;Dbxref=Genbank:WP_000331050.1;Name=WP_000331050.1;end_range=725,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456957.1;locus_tag=STY7866_RS17335;partial=true;product=LysR family transcriptional regulator;protein_id=WP_000331050.1;transl_table=11
##sequence-region NZ_CAAR01000474.1 1 1052
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000474.1	RefSeq	region	1	1052	.	+	.	ID=NZ_CAAR01000474.1:1..1052;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000474.1	RefSeq	gene	134	209	.	-	.	ID=gene-STY7866_RS17310;Name=STY7866_RS17310;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS17310
NZ_CAAR01000474.1	tRNAscan-SE	tRNA	134	209	.	-	.	ID=rna-STY7866_RS17310;Parent=gene-STY7866_RS17310;anticodon=(pos:complement(174..176));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS17310;product=tRNA-Lys
NZ_CAAR01000474.1	tRNAscan-SE	exon	134	209	.	-	.	ID=exon-STY7866_RS17310-1;Parent=rna-STY7866_RS17310;anticodon=(pos:complement(174..176));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS17310;product=tRNA-Lys
NZ_CAAR01000474.1	RefSeq	gene	352	427	.	-	.	ID=gene-STY7866_RS17315;Name=STY7866_RS17315;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS17315
NZ_CAAR01000474.1	tRNAscan-SE	tRNA	352	427	.	-	.	ID=rna-STY7866_RS17315;Parent=gene-STY7866_RS17315;anticodon=(pos:complement(392..394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS17315;product=tRNA-Lys
NZ_CAAR01000474.1	tRNAscan-SE	exon	352	427	.	-	.	ID=exon-STY7866_RS17315-1;Parent=rna-STY7866_RS17315;anticodon=(pos:complement(392..394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS17315;product=tRNA-Lys
NZ_CAAR01000474.1	RefSeq	gene	592	1052	.	-	.	ID=gene-STY7866_RS17320;Name=ybgF;end_range=1052,.;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;locus_tag=STY7866_RS17320;partial=true
NZ_CAAR01000474.1	Protein Homology	CDS	592	1052	.	-	2	ID=cds-WP_000518115.1;Parent=gene-STY7866_RS17320;Dbxref=Genbank:WP_000518115.1;Name=WP_000518115.1;end_range=1052,.;gbkey=CDS;gene=ybgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455306.1;locus_tag=STY7866_RS17320;partial=true;product=tol-pal system protein YbgF;protein_id=WP_000518115.1;transl_table=11
##sequence-region NZ_CAAR01000473.1 1 1464
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000473.1	RefSeq	region	1	1464	.	+	.	ID=NZ_CAAR01000473.1:1..1464;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000473.1	RefSeq	pseudogene	1	256	.	+	.	ID=gene-STY7866_RS17300;Name=STY7866_RS17300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17300;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000473.1	Protein Homology	CDS	1	256	.	+	1	ID=cds-STY7866_RS17300;Parent=gene-STY7866_RS17300;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457559.1;locus_tag=STY7866_RS17300;partial=true;product=diadenosine tetraphosphate hydrolase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000473.1	RefSeq	gene	392	1464	.	-	.	ID=gene-STY7866_RS17305;Name=STY7866_RS17305;end_range=1464,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17305;partial=true
NZ_CAAR01000473.1	Protein Homology	CDS	392	1464	.	-	2	ID=cds-WP_000851339.1;Parent=gene-STY7866_RS17305;Dbxref=Genbank:WP_000851339.1;Name=WP_000851339.1;end_range=1464,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457560.1;locus_tag=STY7866_RS17305;partial=true;product=DUF3362 domain-containing protein;protein_id=WP_000851339.1;transl_table=11
##sequence-region NZ_CAAR01000472.1 1 5496
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000472.1	RefSeq	region	1	5496	.	+	.	ID=NZ_CAAR01000472.1:1..5496;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000472.1	RefSeq	pseudogene	1	566	.	+	.	ID=gene-STY7866_RS17265;Name=STY7866_RS17265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17265;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000472.1	Protein Homology	CDS	1	566	.	+	0	ID=cds-STY7866_RS17265;Parent=gene-STY7866_RS17265;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456765.1;locus_tag=STY7866_RS17265;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000472.1	RefSeq	gene	631	1296	.	-	.	ID=gene-STY7866_RS17270;Name=STY7866_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17270
NZ_CAAR01000472.1	Protein Homology	CDS	631	1296	.	-	0	ID=cds-WP_001213885.1;Parent=gene-STY7866_RS17270;Dbxref=Genbank:WP_001213885.1;Name=WP_001213885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456766.1;locus_tag=STY7866_RS17270;product=membrane protein;protein_id=WP_001213885.1;transl_table=11
NZ_CAAR01000472.1	RefSeq	gene	1298	1420	.	-	.	ID=gene-STY7866_RS17275;Name=STY7866_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17275
NZ_CAAR01000472.1	Protein Homology	CDS	1298	1420	.	-	0	ID=cds-WP_001519564.1;Parent=gene-STY7866_RS17275;Dbxref=Genbank:WP_001519564.1;Name=WP_001519564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=STY7866_RS17275;product=membrane protein;protein_id=WP_001519564.1;transl_table=11
NZ_CAAR01000472.1	RefSeq	gene	1835	2089	.	-	.	ID=gene-STY7866_RS17280;Name=STY7866_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17280
NZ_CAAR01000472.1	Protein Homology	CDS	1835	2089	.	-	0	ID=cds-WP_001523448.1;Parent=gene-STY7866_RS17280;Dbxref=Genbank:WP_001523448.1;Name=WP_001523448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859353.1;locus_tag=STY7866_RS17280;product=YkgJ family cysteine cluster protein;protein_id=WP_001523448.1;transl_table=11
NZ_CAAR01000472.1	RefSeq	gene	2414	2986	.	+	.	ID=gene-STY7866_RS17285;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=STY7866_RS17285
NZ_CAAR01000472.1	Protein Homology	CDS	2414	2986	.	+	0	ID=cds-WP_001136822.1;Parent=gene-STY7866_RS17285;Dbxref=Genbank:WP_001136822.1;Name=WP_001136822.1;gbkey=CDS;gene=yeiP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=STY7866_RS17285;product=elongation factor P-like protein YeiP;protein_id=WP_001136822.1;transl_table=11
NZ_CAAR01000472.1	RefSeq	gene	3199	4185	.	+	.	ID=gene-STY7866_RS17290;Name=STY7866_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17290
NZ_CAAR01000472.1	Protein Homology	CDS	3199	4185	.	+	0	ID=cds-WP_000169350.1;Parent=gene-STY7866_RS17290;Dbxref=Genbank:WP_000169350.1;Name=WP_000169350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456769.1;locus_tag=STY7866_RS17290;product=GTP-binding protein;protein_id=WP_000169350.1;transl_table=11
NZ_CAAR01000472.1	RefSeq	gene	4215	4934	.	+	.	ID=gene-STY7866_RS17295;Name=STY7866_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17295
NZ_CAAR01000472.1	Protein Homology	CDS	4215	4934	.	+	0	ID=cds-WP_000178088.1;Parent=gene-STY7866_RS17295;Dbxref=Genbank:WP_000178088.1;Name=WP_000178088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456770.1;locus_tag=STY7866_RS17295;product=phosphatase PAP2 family protein;protein_id=WP_000178088.1;transl_table=11
NZ_CAAR01000472.1	RefSeq	pseudogene	5349	5496	.	+	.	ID=gene-STY7866_RS27630;Name=spr;end_range=5496,.;gbkey=Gene;gene=spr;gene_biotype=pseudogene;gene_synonym=yeiV;locus_tag=STY7866_RS27630;partial=true;pseudo=true
NZ_CAAR01000472.1	Protein Homology	CDS	5349	5496	.	+	0	ID=cds-STY7866_RS27630;Parent=gene-STY7866_RS27630;Note=mutational suppressor of prc thermosensitivity%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5496,.;gbkey=CDS;gene=spr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456771.1;locus_tag=STY7866_RS27630;partial=true;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000471.1 1 685
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000471.1	RefSeq	region	1	685	.	+	.	ID=NZ_CAAR01000471.1:1..685;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000471.1	RefSeq	pseudogene	298	685	.	+	.	ID=gene-STY7866_RS17260;Name=STY7866_RS17260;end_range=685,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17260;partial=true;pseudo=true
NZ_CAAR01000471.1	Protein Homology	CDS	298	685	.	+	0	ID=cds-STY7866_RS17260;Parent=gene-STY7866_RS17260;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=685,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=STY7866_RS17260;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000470.1 1 10979
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000470.1	RefSeq	region	1	10979	.	+	.	ID=NZ_CAAR01000470.1:1..10979;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000470.1	RefSeq	gene	1	492	.	+	.	ID=gene-STY7866_RS17190;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=STY7866_RS17190;partial=true;start_range=.,1
NZ_CAAR01000470.1	Protein Homology	CDS	1	492	.	+	0	ID=cds-WP_000303285.1;Parent=gene-STY7866_RS17190;Dbxref=Genbank:WP_000303285.1;Name=WP_000303285.1;gbkey=CDS;gene=ftsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457959.1;locus_tag=STY7866_RS17190;partial=true;product=cell division protein FtsN;protein_id=WP_000303285.1;start_range=.,1;transl_table=11
NZ_CAAR01000470.1	RefSeq	gene	584	1114	.	+	.	ID=gene-STY7866_RS17195;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=STY7866_RS17195
NZ_CAAR01000470.1	Protein Homology	CDS	584	1114	.	+	0	ID=cds-WP_000208240.1;Parent=gene-STY7866_RS17195;Dbxref=Genbank:WP_000208240.1;Name=WP_000208240.1;gbkey=CDS;gene=hslV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457544.1;locus_tag=STY7866_RS17195;product=ATP-dependent protease subunit HslV;protein_id=WP_000208240.1;transl_table=11
NZ_CAAR01000470.1	RefSeq	gene	1124	2455	.	+	.	ID=gene-STY7866_RS17200;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=STY7866_RS17200
NZ_CAAR01000470.1	Protein Homology	CDS	1124	2455	.	+	0	ID=cds-WP_001293355.1;Parent=gene-STY7866_RS17200;Dbxref=Genbank:WP_001293355.1;Name=WP_001293355.1;gbkey=CDS;gene=hslU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=STY7866_RS17200;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293355.1;transl_table=11
NZ_CAAR01000470.1	RefSeq	gene	2522	3451	.	+	.	ID=gene-STY7866_RS17205;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=STY7866_RS17205
NZ_CAAR01000470.1	Protein Homology	CDS	2522	3451	.	+	0	ID=cds-WP_000139635.1;Parent=gene-STY7866_RS17205;Dbxref=Genbank:WP_000139635.1;Name=WP_000139635.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457962.1;locus_tag=STY7866_RS17205;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139635.1;transl_table=11
NZ_CAAR01000470.1	RefSeq	gene	3544	4029	.	+	.	ID=gene-STY7866_RS17210;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=STY7866_RS17210
NZ_CAAR01000470.1	Protein Homology	CDS	3544	4029	.	+	0	ID=cds-WP_000872918.1;Parent=gene-STY7866_RS17210;Dbxref=Genbank:WP_000872918.1;Name=WP_000872918.1;gbkey=CDS;gene=rraA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=STY7866_RS17210;product=ribonuclease E activity regulator RraA;protein_id=WP_000872918.1;transl_table=11
NZ_CAAR01000470.1	RefSeq	gene	4026	4232	.	+	.	ID=gene-STY7866_RS27625;Name=STY7866_RS27625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27625
NZ_CAAR01000470.1	Protein Homology	CDS	4026	4232	.	+	0	ID=cds-WP_024151201.1;Parent=gene-STY7866_RS27625;Dbxref=Genbank:WP_024151201.1;Name=WP_024151201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521029.1;locus_tag=STY7866_RS27625;product=hypothetical protein;protein_id=WP_024151201.1;transl_table=11
NZ_CAAR01000470.1	RefSeq	gene	4251	4490	.	-	.	ID=gene-STY7866_RS17215;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=STY7866_RS17215
NZ_CAAR01000470.1	Protein Homology	CDS	4251	4490	.	-	0	ID=cds-WP_000051368.1;Parent=gene-STY7866_RS17215;Dbxref=Genbank:WP_000051368.1;Name=WP_000051368.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501806.1;locus_tag=STY7866_RS17215;product=septal ring assembly protein ZapB;protein_id=WP_000051368.1;transl_table=11
NZ_CAAR01000470.1	RefSeq	gene	4889	5734	.	+	.	ID=gene-STY7866_RS17220;Name=STY7866_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17220
NZ_CAAR01000470.1	Protein Homology	CDS	4889	5734	.	+	0	ID=cds-WP_000084284.1;Parent=gene-STY7866_RS17220;Dbxref=Genbank:WP_000084284.1;Name=WP_000084284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457965.1;locus_tag=STY7866_RS17220;product=aquaporin;protein_id=WP_000084284.1;transl_table=11
NZ_CAAR01000470.1	RefSeq	gene	5755	7260	.	+	.	ID=gene-STY7866_RS17225;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=STY7866_RS17225
NZ_CAAR01000470.1	Protein Homology	CDS	5755	7260	.	+	0	ID=cds-WP_000137244.1;Parent=gene-STY7866_RS17225;Dbxref=Genbank:WP_000137244.1;Name=WP_000137244.1;gbkey=CDS;gene=glpK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457966.1;locus_tag=STY7866_RS17225;product=glycerol kinase GlpK;protein_id=WP_000137244.1;transl_table=11
NZ_CAAR01000470.1	RefSeq	gene	7372	8382	.	+	.	ID=gene-STY7866_RS17230;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=STY7866_RS17230
NZ_CAAR01000470.1	Protein Homology	CDS	7372	8382	.	+	0	ID=cds-WP_001250624.1;Parent=gene-STY7866_RS17230;Dbxref=Genbank:WP_001250624.1;Name=WP_001250624.1;gbkey=CDS;gene=glpX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=STY7866_RS17230;product=class II fructose-bisphosphatase;protein_id=WP_001250624.1;transl_table=11
NZ_CAAR01000470.1	RefSeq	gene	8479	9225	.	+	.	ID=gene-STY7866_RS17235;Name=STY7866_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17235
NZ_CAAR01000470.1	Protein Homology	CDS	8479	9225	.	+	0	ID=cds-WP_000796307.1;Parent=gene-STY7866_RS17235;Dbxref=Genbank:WP_000796307.1;Name=WP_000796307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457968.1;locus_tag=STY7866_RS17235;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796307.1;transl_table=11
NZ_CAAR01000470.1	RefSeq	gene	9332	9760	.	-	.	ID=gene-STY7866_RS17240;Name=STY7866_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17240
NZ_CAAR01000470.1	Protein Homology	CDS	9332	9760	.	-	0	ID=cds-WP_000155237.1;Parent=gene-STY7866_RS17240;Dbxref=Genbank:WP_000155237.1;Name=WP_000155237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457969.1;locus_tag=STY7866_RS17240;product=DUF805 domain-containing protein;protein_id=WP_000155237.1;transl_table=11
NZ_CAAR01000470.1	RefSeq	gene	9861	10457	.	+	.	ID=gene-STY7866_RS17245;Name=STY7866_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17245
NZ_CAAR01000470.1	Protein Homology	CDS	9861	10457	.	+	0	ID=cds-WP_000802241.1;Parent=gene-STY7866_RS17245;Dbxref=Genbank:WP_000802241.1;Name=WP_000802241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457970.1;locus_tag=STY7866_RS17245;product=YiiQ family protein;protein_id=WP_000802241.1;transl_table=11
NZ_CAAR01000470.1	RefSeq	gene	10570	10979	.	+	.	ID=gene-STY7866_RS17250;Name=tpiA;end_range=10979,.;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=STY7866_RS17250;partial=true
NZ_CAAR01000470.1	Protein Homology	CDS	10570	10979	.	+	0	ID=cds-WP_001764825.1;Parent=gene-STY7866_RS17250;Dbxref=Genbank:WP_001764825.1;Name=WP_001764825.1;end_range=10979,.;gbkey=CDS;gene=tpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457971.1;locus_tag=STY7866_RS17250;partial=true;product=triose-phosphate isomerase;protein_id=WP_001764825.1;transl_table=11
##sequence-region NZ_CAAR01000469.1 1 3236
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000469.1	RefSeq	region	1	3236	.	+	.	ID=NZ_CAAR01000469.1:1..3236;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000469.1	RefSeq	gene	1	204	.	-	.	ID=gene-STY7866_RS27620;Name=STY7866_RS27620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27620;partial=true;start_range=.,1
NZ_CAAR01000469.1	Protein Homology	CDS	1	204	.	-	0	ID=cds-WP_001764819.1;Parent=gene-STY7866_RS27620;Dbxref=Genbank:WP_001764819.1;Name=WP_001764819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457789.1;locus_tag=STY7866_RS27620;partial=true;product=HAD-IIB family hydrolase;protein_id=WP_001764819.1;start_range=.,1;transl_table=11
NZ_CAAR01000469.1	RefSeq	gene	220	1236	.	-	.	ID=gene-STY7866_RS17170;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=STY7866_RS17170
NZ_CAAR01000469.1	Protein Homology	CDS	220	1236	.	-	0	ID=cds-WP_000487681.1;Parent=gene-STY7866_RS17170;Dbxref=Genbank:WP_000487681.1;Name=WP_000487681.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457790.1;locus_tag=STY7866_RS17170;product=lysophospholipase L2;protein_id=WP_000487681.1;transl_table=11
NZ_CAAR01000469.1	RefSeq	gene	1347	1967	.	+	.	ID=gene-STY7866_RS17175;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=STY7866_RS17175
NZ_CAAR01000469.1	Protein Homology	CDS	1347	1967	.	+	0	ID=cds-WP_000142520.1;Parent=gene-STY7866_RS17175;Dbxref=Genbank:WP_000142520.1;Name=WP_000142520.1;gbkey=CDS;gene=rhtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457791.1;locus_tag=STY7866_RS17175;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000142520.1;transl_table=11
NZ_CAAR01000469.1	RefSeq	gene	2007	2627	.	-	.	ID=gene-STY7866_RS17180;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=STY7866_RS17180
NZ_CAAR01000469.1	Protein Homology	CDS	2007	2627	.	-	0	ID=cds-WP_000928814.1;Parent=gene-STY7866_RS17180;Dbxref=Genbank:WP_000928814.1;Name=WP_000928814.1;gbkey=CDS;gene=rhtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457792.1;locus_tag=STY7866_RS17180;product=threonine export protein RhtC;protein_id=WP_000928814.1;transl_table=11
NZ_CAAR01000469.1	RefSeq	pseudogene	2691	3236	.	-	.	ID=gene-STY7866_RS17185;Name=STY7866_RS17185;end_range=3236,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17185;partial=true;pseudo=true
NZ_CAAR01000469.1	Protein Homology	CDS	2691	3236	.	-	0	ID=cds-STY7866_RS17185;Parent=gene-STY7866_RS17185;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3236,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457793.3;locus_tag=STY7866_RS17185;partial=true;product=ATP-dependent DNA helicase RecQ;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000468.1 1 487
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000468.1	RefSeq	region	1	487	.	+	.	ID=NZ_CAAR01000468.1:1..487;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000467.1 1 6969
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000467.1	RefSeq	region	1	6969	.	+	.	ID=NZ_CAAR01000467.1:1..6969;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000467.1	RefSeq	gene	15	1082	.	+	.	ID=gene-STY7866_RS17145;Name=STY7866_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17145
NZ_CAAR01000467.1	Protein Homology	CDS	15	1082	.	+	0	ID=cds-WP_151260010.1;Parent=gene-STY7866_RS17145;Dbxref=Genbank:WP_151260010.1;Name=WP_151260010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015690771.1;locus_tag=STY7866_RS17145;product=DUF1205 domain-containing protein;protein_id=WP_151260010.1;transl_table=11
NZ_CAAR01000467.1	RefSeq	gene	1163	4819	.	+	.	ID=gene-STY7866_RS17150;Name=STY7866_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17150
NZ_CAAR01000467.1	Protein Homology	CDS	1163	4819	.	+	0	ID=cds-WP_001111827.1;Parent=gene-STY7866_RS17150;Dbxref=Genbank:WP_001111827.1;Name=WP_001111827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457174.1;locus_tag=STY7866_RS17150;product=ABC transporter ATP-binding protein;protein_id=WP_001111827.1;transl_table=11
NZ_CAAR01000467.1	RefSeq	gene	4929	6173	.	+	.	ID=gene-STY7866_RS17155;Name=STY7866_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17155
NZ_CAAR01000467.1	Protein Homology	CDS	4929	6173	.	+	0	ID=cds-WP_001239947.1;Parent=gene-STY7866_RS17155;Dbxref=Genbank:WP_001239947.1;Name=WP_001239947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457175.1;locus_tag=STY7866_RS17155;product=esterase family protein;protein_id=WP_001239947.1;transl_table=11
NZ_CAAR01000467.1	RefSeq	gene	6205	6969	.	+	.	ID=gene-STY7866_RS17160;Name=STY7866_RS17160;end_range=6969,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17160;partial=true
NZ_CAAR01000467.1	Protein Homology	CDS	6205	6969	.	+	0	ID=cds-WP_000274372.1;Parent=gene-STY7866_RS17160;Dbxref=Genbank:WP_000274372.1;Name=WP_000274372.1;end_range=6969,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457176.1;locus_tag=STY7866_RS17160;partial=true;product=alpha/beta hydrolase;protein_id=WP_000274372.1;transl_table=11
##sequence-region NZ_CAAR01000466.1 1 4864
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000466.1	RefSeq	region	1	4864	.	+	.	ID=NZ_CAAR01000466.1:1..4864;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000466.1	RefSeq	gene	1	526	.	+	.	ID=gene-STY7866_RS17110;Name=STY7866_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17110;partial=true;start_range=.,1
NZ_CAAR01000466.1	Protein Homology	CDS	1	526	.	+	1	ID=cds-WP_000407471.1;Parent=gene-STY7866_RS17110;Dbxref=Genbank:WP_000407471.1;Name=WP_000407471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455395.1;locus_tag=STY7866_RS17110;partial=true;product=MFS transporter;protein_id=WP_000407471.1;start_range=.,1;transl_table=11
NZ_CAAR01000466.1	RefSeq	pseudogene	523	1337	.	+	.	ID=gene-STY7866_RS17120;Name=STY7866_RS17120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17120;pseudo=true
NZ_CAAR01000466.1	Protein Homology	CDS	523	1337	.	+	0	ID=cds-STY7866_RS17120;Parent=gene-STY7866_RS17120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455394.1;locus_tag=STY7866_RS17120;product=HAD family hydrolase;pseudo=true;transl_table=11
NZ_CAAR01000466.1	RefSeq	gene	1391	2623	.	-	.	ID=gene-STY7866_RS17125;Name=STY7866_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17125
NZ_CAAR01000466.1	Protein Homology	CDS	1391	2623	.	-	0	ID=cds-WP_001181284.1;Parent=gene-STY7866_RS17125;Dbxref=Genbank:WP_001181284.1;Name=WP_001181284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455393.1;locus_tag=STY7866_RS17125;product=MFS transporter;protein_id=WP_001181284.1;transl_table=11
NZ_CAAR01000466.1	RefSeq	gene	2936	3544	.	+	.	ID=gene-STY7866_RS17130;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=STY7866_RS17130
NZ_CAAR01000466.1	Protein Homology	CDS	2936	3544	.	+	0	ID=cds-WP_001520197.1;Parent=gene-STY7866_RS17130;Dbxref=Genbank:WP_001520197.1;Name=WP_001520197.1;gbkey=CDS;gene=ybjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455392.1;locus_tag=STY7866_RS17130;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001520197.1;transl_table=11
NZ_CAAR01000466.1	RefSeq	gene	3616	4374	.	+	.	ID=gene-STY7866_RS17135;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=STY7866_RS17135
NZ_CAAR01000466.1	Protein Homology	CDS	3616	4374	.	+	0	ID=cds-WP_000450106.1;Parent=gene-STY7866_RS17135;Dbxref=Genbank:WP_000450106.1;Name=WP_000450106.1;gbkey=CDS;gene=deoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455391.1;locus_tag=STY7866_RS17135;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450106.1;transl_table=11
NZ_CAAR01000466.1	RefSeq	pseudogene	4420	4864	.	-	.	ID=gene-STY7866_RS17140;Name=STY7866_RS17140;end_range=4864,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17140;partial=true;pseudo=true
NZ_CAAR01000466.1	Protein Homology	CDS	4420	4864	.	-	1	ID=cds-STY7866_RS17140;Parent=gene-STY7866_RS17140;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4864,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455390.1;locus_tag=STY7866_RS17140;partial=true;product=serine-type D-Ala-D-Ala carboxypeptidase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000465.1 1 3257
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000465.1	RefSeq	region	1	3257	.	+	.	ID=NZ_CAAR01000465.1:1..3257;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000465.1	RefSeq	gene	1	918	.	-	.	ID=gene-STY7866_RS17090;Name=STY7866_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17090;partial=true;start_range=.,1
NZ_CAAR01000465.1	Protein Homology	CDS	1	918	.	-	0	ID=cds-WP_000534994.1;Parent=gene-STY7866_RS17090;Dbxref=Genbank:WP_000534994.1;Name=WP_000534994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456758.1;locus_tag=STY7866_RS17090;partial=true;product=amino acid permease;protein_id=WP_000534994.1;start_range=.,1;transl_table=11
NZ_CAAR01000465.1	RefSeq	gene	1108	1971	.	-	.	ID=gene-STY7866_RS17095;Name=STY7866_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17095
NZ_CAAR01000465.1	Protein Homology	CDS	1108	1971	.	-	0	ID=cds-WP_000548307.1;Parent=gene-STY7866_RS17095;Dbxref=Genbank:WP_000548307.1;Name=WP_000548307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456759.1;locus_tag=STY7866_RS17095;product=LysR family transcriptional regulator;protein_id=WP_000548307.1;transl_table=11
NZ_CAAR01000465.1	RefSeq	pseudogene	2092	3140	.	+	.	ID=gene-STY7866_RS17100;Name=STY7866_RS17100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17100;pseudo=true
NZ_CAAR01000465.1	Protein Homology	CDS	2092	3140	.	+	0	ID=cds-STY7866_RS17100;Parent=gene-STY7866_RS17100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456760.1;locus_tag=STY7866_RS17100;product=YeiH family protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000464.1 1 8895
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000464.1	RefSeq	region	1	8895	.	+	.	ID=NZ_CAAR01000464.1:1..8895;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000464.1	RefSeq	pseudogene	1	561	.	-	.	ID=gene-STY7866_RS17035;Name=STY7866_RS17035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17035;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000464.1	Protein Homology	CDS	1	561	.	-	0	ID=cds-STY7866_RS17035;Parent=gene-STY7866_RS17035;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457311.1;locus_tag=STY7866_RS17035;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000464.1	RefSeq	gene	561	1154	.	-	.	ID=gene-STY7866_RS17040;Name=STY7866_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17040
NZ_CAAR01000464.1	Protein Homology	CDS	561	1154	.	-	0	ID=cds-WP_001764801.1;Parent=gene-STY7866_RS17040;Dbxref=Genbank:WP_001764801.1;Name=WP_001764801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134854.1;locus_tag=STY7866_RS17040;product=UbiX family flavin prenyltransferase;protein_id=WP_001764801.1;transl_table=11
NZ_CAAR01000464.1	RefSeq	gene	1325	1729	.	+	.	ID=gene-STY7866_RS17045;Name=STY7866_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17045
NZ_CAAR01000464.1	Protein Homology	CDS	1325	1729	.	+	0	ID=cds-WP_000423338.1;Parent=gene-STY7866_RS17045;Dbxref=Genbank:WP_000423338.1;Name=WP_000423338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457309.1;locus_tag=STY7866_RS17045;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000423338.1;transl_table=11
NZ_CAAR01000464.1	RefSeq	gene	1748	2512	.	-	.	ID=gene-STY7866_RS17050;Name=STY7866_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17050
NZ_CAAR01000464.1	Protein Homology	CDS	1748	2512	.	-	0	ID=cds-WP_000613182.1;Parent=gene-STY7866_RS17050;Dbxref=Genbank:WP_000613182.1;Name=WP_000613182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457308.1;locus_tag=STY7866_RS17050;product=DeoR/GlpR transcriptional regulator;protein_id=WP_000613182.1;transl_table=11
NZ_CAAR01000464.1	RefSeq	pseudogene	2704	3128	.	+	.	ID=gene-STY7866_RS17055;Name=STY7866_RS17055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17055;pseudo=true
NZ_CAAR01000464.1	Protein Homology	CDS	2704	3128	.	+	0	ID=cds-STY7866_RS17055;Parent=gene-STY7866_RS17055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001613336.1;locus_tag=STY7866_RS17055;product=NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11
NZ_CAAR01000464.1	RefSeq	gene	3128	3265	.	+	.	ID=gene-STY7866_RS27615;Name=STY7866_RS27615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27615
NZ_CAAR01000464.1	Protein Homology	CDS	3128	3265	.	+	0	ID=cds-WP_001681566.1;Parent=gene-STY7866_RS27615;Dbxref=Genbank:WP_001681566.1;Name=WP_001681566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681566.1;locus_tag=STY7866_RS27615;product=hypothetical protein;protein_id=WP_001681566.1;transl_table=11
NZ_CAAR01000464.1	RefSeq	pseudogene	3219	4004	.	+	.	ID=gene-STY7866_RS17060;Name=STY7866_RS17060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17060;partial=true;pseudo=true;start_range=.,3219
NZ_CAAR01000464.1	Protein Homology	CDS	3219	4004	.	+	0	ID=cds-STY7866_RS17060;Parent=gene-STY7866_RS17060;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=STY7866_RS17060;partial=true;product=3-oxo-tetronate kinase;pseudo=true;start_range=.,3219;transl_table=11
NZ_CAAR01000464.1	RefSeq	gene	4001	4639	.	+	.	ID=gene-STY7866_RS17065;Name=STY7866_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17065
NZ_CAAR01000464.1	Protein Homology	CDS	4001	4639	.	+	0	ID=cds-WP_000153636.1;Parent=gene-STY7866_RS17065;Dbxref=Genbank:WP_000153636.1;Name=WP_000153636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457307.1;locus_tag=STY7866_RS17065;product=aldolase;protein_id=WP_000153636.1;transl_table=11
NZ_CAAR01000464.1	RefSeq	gene	4644	5420	.	+	.	ID=gene-STY7866_RS17070;Name=STY7866_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17070
NZ_CAAR01000464.1	Protein Homology	CDS	4644	5420	.	+	0	ID=cds-WP_001136884.1;Parent=gene-STY7866_RS17070;Dbxref=Genbank:WP_001136884.1;Name=WP_001136884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457306.1;locus_tag=STY7866_RS17070;product=HPr family phosphocarrier protein;protein_id=WP_001136884.1;transl_table=11
NZ_CAAR01000464.1	RefSeq	gene	5460	6410	.	+	.	ID=gene-STY7866_RS17075;Name=STY7866_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17075
NZ_CAAR01000464.1	Protein Homology	CDS	5460	6410	.	+	0	ID=cds-WP_001165723.1;Parent=gene-STY7866_RS17075;Dbxref=Genbank:WP_001165723.1;Name=WP_001165723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457305.1;locus_tag=STY7866_RS17075;product=SDR family oxidoreductase;protein_id=WP_001165723.1;transl_table=11
NZ_CAAR01000464.1	RefSeq	pseudogene	6407	7902	.	+	.	ID=gene-STY7866_RS17080;Name=STY7866_RS17080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS17080;pseudo=true
NZ_CAAR01000464.1	Protein Homology	CDS	6407	7902	.	+	0	ID=cds-STY7866_RS17080;Parent=gene-STY7866_RS17080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457304.1;locus_tag=STY7866_RS17080;product=GntP family permease;pseudo=true;transl_table=11
NZ_CAAR01000464.1	RefSeq	gene	7944	8876	.	-	.	ID=gene-STY7866_RS17085;Name=STY7866_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17085
NZ_CAAR01000464.1	Protein Homology	CDS	7944	8876	.	-	0	ID=cds-WP_000216318.1;Parent=gene-STY7866_RS17085;Dbxref=Genbank:WP_000216318.1;Name=WP_000216318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457303.1;locus_tag=STY7866_RS17085;product=LysR family transcriptional regulator;protein_id=WP_000216318.1;transl_table=11
##sequence-region NZ_CAAR01000463.1 1 7692
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000463.1	RefSeq	region	1	7692	.	+	.	ID=NZ_CAAR01000463.1:1..7692;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000463.1	RefSeq	gene	1	2056	.	-	.	ID=gene-STY7866_RS16995;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=STY7866_RS16995;partial=true;start_range=.,1
NZ_CAAR01000463.1	Protein Homology	CDS	1	2056	.	-	0	ID=cds-WP_000069331.1;Parent=gene-STY7866_RS16995;Dbxref=Genbank:WP_000069331.1;Name=WP_000069331.1;gbkey=CDS;gene=ppsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000069371.1;locus_tag=STY7866_RS16995;partial=true;product=phosphoenolpyruvate synthase;protein_id=WP_000069331.1;start_range=.,1;transl_table=11
NZ_CAAR01000463.1	RefSeq	pseudogene	2393	3230	.	+	.	ID=gene-STY7866_RS17005;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=pseudogene;locus_tag=STY7866_RS17005;pseudo=true
NZ_CAAR01000463.1	Protein Homology	CDS	2393	3230	.	+	0	ID=cds-STY7866_RS17005;Parent=gene-STY7866_RS17005;Note=frameshifted;gbkey=CDS;gene=ppsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000370994.1;locus_tag=STY7866_RS17005;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;pseudo=true;transl_table=11
NZ_CAAR01000463.1	RefSeq	gene	3386	4432	.	+	.	ID=gene-STY7866_RS17010;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=STY7866_RS17010
NZ_CAAR01000463.1	Protein Homology	CDS	3386	4432	.	+	0	ID=cds-WP_001082192.1;Parent=gene-STY7866_RS17010;Dbxref=Genbank:WP_001082192.1;Name=WP_001082192.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456164.1;locus_tag=STY7866_RS17010;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082192.1;transl_table=11
NZ_CAAR01000463.1	RefSeq	gene	4589	4780	.	+	.	ID=gene-STY7866_RS17015;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=STY7866_RS17015
NZ_CAAR01000463.1	Protein Homology	CDS	4589	4780	.	+	0	ID=cds-WP_000089115.1;Parent=gene-STY7866_RS17015;Dbxref=Genbank:WP_000089115.1;Name=WP_000089115.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456165.1;locus_tag=STY7866_RS17015;product=hemin uptake protein HemP;protein_id=WP_000089115.1;transl_table=11
NZ_CAAR01000463.1	RefSeq	gene	4816	6258	.	-	.	ID=gene-STY7866_RS17020;Name=STY7866_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17020
NZ_CAAR01000463.1	Protein Homology	CDS	4816	6258	.	-	0	ID=cds-WP_000175658.1;Parent=gene-STY7866_RS17020;Dbxref=Genbank:WP_000175658.1;Name=WP_000175658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456166.1;locus_tag=STY7866_RS17020;product=YdiU family protein;protein_id=WP_000175658.1;transl_table=11
NZ_CAAR01000463.1	RefSeq	gene	6320	7033	.	-	.	ID=gene-STY7866_RS17025;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=STY7866_RS17025
NZ_CAAR01000463.1	Protein Homology	CDS	6320	7033	.	-	0	ID=cds-WP_000561998.1;Parent=gene-STY7866_RS17025;Dbxref=Genbank:WP_000561998.1;Name=WP_000561998.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456167.1;locus_tag=STY7866_RS17025;product=anti-FlhDC factor YdiV;protein_id=WP_000561998.1;transl_table=11
NZ_CAAR01000463.1	RefSeq	gene	7347	7692	.	-	.	ID=gene-STY7866_RS17030;Name=STY7866_RS17030;end_range=7692,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS17030;partial=true
NZ_CAAR01000463.1	Protein Homology	CDS	7347	7692	.	-	1	ID=cds-WP_000302636.1;Parent=gene-STY7866_RS17030;Dbxref=Genbank:WP_000302636.1;Name=WP_000302636.1;end_range=7692,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456168.1;locus_tag=STY7866_RS17030;partial=true;product=endopeptidase;protein_id=WP_000302636.1;transl_table=11
##sequence-region NZ_CAAR01000462.1 1 852
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000462.1	RefSeq	region	1	852	.	+	.	ID=NZ_CAAR01000462.1:1..852;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000462.1	RefSeq	pseudogene	1	637	.	+	.	ID=gene-STY7866_RS16985;Name=STY7866_RS16985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16985;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000462.1	Protein Homology	CDS	1	637	.	+	2	ID=cds-STY7866_RS16985;Parent=gene-STY7866_RS16985;Note=catalyzes the degradation of arginine to citruline and ammonia%3B frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458884.1;locus_tag=STY7866_RS16985;partial=true;product=arginine deiminase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000462.1	RefSeq	pseudogene	648	852	.	+	.	ID=gene-STY7866_RS16990;Name=STY7866_RS16990;end_range=852,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16990;partial=true;pseudo=true
NZ_CAAR01000462.1	Protein Homology	CDS	648	852	.	+	0	ID=cds-STY7866_RS16990;Parent=gene-STY7866_RS16990;Note=reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=852,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458883.1;locus_tag=STY7866_RS16990;partial=true;product=carbamate kinase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000461.1 1 890
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000461.1	RefSeq	region	1	890	.	+	.	ID=NZ_CAAR01000461.1:1..890;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000461.1	RefSeq	gene	1	408	.	-	.	ID=gene-STY7866_RS16975;Name=STY7866_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16975;partial=true;start_range=.,1
NZ_CAAR01000461.1	Protein Homology	CDS	1	408	.	-	0	ID=cds-WP_000944168.1;Parent=gene-STY7866_RS16975;Dbxref=Genbank:WP_000944168.1;Name=WP_000944168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159092.1;locus_tag=STY7866_RS16975;partial=true;product=CBS domain-containing protein;protein_id=WP_000944168.1;start_range=.,1;transl_table=11
NZ_CAAR01000461.1	RefSeq	pseudogene	569	890	.	+	.	ID=gene-STY7866_RS16980;Name=xseA;end_range=890,.;gbkey=Gene;gene=xseA;gene_biotype=pseudogene;locus_tag=STY7866_RS16980;partial=true;pseudo=true
NZ_CAAR01000461.1	Protein Homology	CDS	569	890	.	+	0	ID=cds-STY7866_RS16980;Parent=gene-STY7866_RS16980;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=890,.;gbkey=CDS;gene=xseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457046.1;locus_tag=STY7866_RS16980;partial=true;product=exodeoxyribonuclease VII large subunit;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000460.1 1 1868
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000460.1	RefSeq	region	1	1868	.	+	.	ID=NZ_CAAR01000460.1:1..1868;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000460.1	RefSeq	gene	1	1055	.	+	.	ID=gene-STY7866_RS16965;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=STY7866_RS16965;partial=true;start_range=.,1
NZ_CAAR01000460.1	Protein Homology	CDS	1	1055	.	+	2	ID=cds-WP_000430831.1;Parent=gene-STY7866_RS16965;Dbxref=Genbank:WP_000430831.1;Name=WP_000430831.1;gbkey=CDS;gene=galK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=STY7866_RS16965;partial=true;product=galactokinase;protein_id=WP_000430831.1;start_range=.,1;transl_table=11
NZ_CAAR01000460.1	RefSeq	gene	1049	1868	.	+	.	ID=gene-STY7866_RS16970;Name=STY7866_RS16970;end_range=1868,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16970;partial=true
NZ_CAAR01000460.1	Protein Homology	CDS	1049	1868	.	+	0	ID=cds-WP_000931430.1;Parent=gene-STY7866_RS16970;Dbxref=Genbank:WP_000931430.1;Name=WP_000931430.1;end_range=1868,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455315.1;locus_tag=STY7866_RS16970;partial=true;product=galactose-1-epimerase;protein_id=WP_000931430.1;transl_table=11
##sequence-region NZ_CAAR01000459.1 1 1113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000459.1	RefSeq	region	1	1113	.	+	.	ID=NZ_CAAR01000459.1:1..1113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000459.1	RefSeq	gene	1	566	.	+	.	ID=gene-STY7866_RS16955;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=STY7866_RS16955;partial=true;start_range=.,1
NZ_CAAR01000459.1	Protein Homology	CDS	1	566	.	+	2	ID=cds-WP_000325585.1;Parent=gene-STY7866_RS16955;Dbxref=Genbank:WP_000325585.1;Name=WP_000325585.1;gbkey=CDS;gene=melR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458596.1;locus_tag=STY7866_RS16955;partial=true;product=transcriptional regulator MelR;protein_id=WP_000325585.1;start_range=.,1;transl_table=11
NZ_CAAR01000459.1	RefSeq	pseudogene	799	1113	.	+	.	ID=gene-STY7866_RS16960;Name=STY7866_RS16960;end_range=1113,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16960;partial=true;pseudo=true
NZ_CAAR01000459.1	Protein Homology	CDS	799	1113	.	+	0	ID=cds-STY7866_RS16960;Parent=gene-STY7866_RS16960;Note=biodegradative%3B catalyzes the formation of agmatine from arginine%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1113,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418541.2;locus_tag=STY7866_RS16960;partial=true;product=arginine decarboxylase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000458.1 1 166
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000458.1	RefSeq	region	1	166	.	+	.	ID=NZ_CAAR01000458.1:1..166;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000457.1 1 27252
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000457.1	RefSeq	region	1	27252	.	+	.	ID=NZ_CAAR01000457.1:1..27252;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000457.1	RefSeq	pseudogene	1	513	.	+	.	ID=gene-STY7866_RS16800;Name=STY7866_RS16800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16800;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000457.1	Protein Homology	CDS	1	513	.	+	0	ID=cds-STY7866_RS16800;Parent=gene-STY7866_RS16800;Note=regulates the synthesis and expression of the dsdXA operon and dadA gene%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458137.1;locus_tag=STY7866_RS16800;partial=true;product=DNA-binding transcriptional regulator DsdC;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	577	1662	.	+	.	ID=gene-STY7866_RS16805;Name=STY7866_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16805
NZ_CAAR01000457.1	Protein Homology	CDS	577	1662	.	+	0	ID=cds-WP_000238915.1;Parent=gene-STY7866_RS16805;Dbxref=Genbank:WP_000238915.1;Name=WP_000238915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458138.1;locus_tag=STY7866_RS16805;product=cellulase family glycosylhydrolase;protein_id=WP_000238915.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	1589	2773	.	-	.	ID=gene-STY7866_RS16810;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=STY7866_RS16810
NZ_CAAR01000457.1	Protein Homology	CDS	1589	2773	.	-	0	ID=cds-WP_000828742.1;Parent=gene-STY7866_RS16810;Dbxref=Genbank:WP_000828742.1;Name=WP_000828742.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458139.1;locus_tag=STY7866_RS16810;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828742.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	pseudogene	2975	3835	.	-	.	ID=gene-STY7866_RS16815;Name=STY7866_RS16815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16815;pseudo=true
NZ_CAAR01000457.1	Protein Homology	CDS	2975	3835	.	-	0	ID=cds-STY7866_RS16815;Parent=gene-STY7866_RS16815;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=STY7866_RS16815;product=EamA family transporter;pseudo=true;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	3928	4017	.	-	.	ID=gene-STY7866_RS16820;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=STY7866_RS16820
NZ_CAAR01000457.1	Protein Homology	CDS	3928	4017	.	-	0	ID=cds-WP_000117642.1;Parent=gene-STY7866_RS16820;Dbxref=Genbank:WP_000117642.1;Name=WP_000117642.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=STY7866_RS16820;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000117642.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	pseudogene	4014	4128	.	-	.	ID=gene-STY7866_RS27600;Name=STY7866_RS27600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27600;pseudo=true
NZ_CAAR01000457.1	Protein Homology	CDS	4014	4128	.	-	0	ID=cds-STY7866_RS27600;Parent=gene-STY7866_RS27600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=STY7866_RS27600;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	4651	4749	.	+	.	ID=gene-STY7866_RS16825;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=STY7866_RS16825
NZ_CAAR01000457.1	Protein Homology	CDS	4651	4749	.	+	0	ID=cds-WP_001541152.1;Parent=gene-STY7866_RS16825;Dbxref=Genbank:WP_001541152.1;Name=WP_001541152.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458140.1;locus_tag=STY7866_RS16825;product=ilvB operon leader peptide IvbL;protein_id=WP_001541152.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	4856	6544	.	+	.	ID=gene-STY7866_RS16830;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=STY7866_RS16830
NZ_CAAR01000457.1	Protein Homology	CDS	4856	6544	.	+	0	ID=cds-WP_000168445.1;Parent=gene-STY7866_RS16830;Dbxref=Genbank:WP_000168445.1;Name=WP_000168445.1;gbkey=CDS;gene=ilvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458141.1;locus_tag=STY7866_RS16830;product=acetolactate synthase large subunit;protein_id=WP_000168445.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	6548	6838	.	+	.	ID=gene-STY7866_RS16835;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=STY7866_RS16835
NZ_CAAR01000457.1	Protein Homology	CDS	6548	6838	.	+	0	ID=cds-WP_001171826.1;Parent=gene-STY7866_RS16835;Dbxref=Genbank:WP_001171826.1;Name=WP_001171826.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458142.1;locus_tag=STY7866_RS16835;product=acetolactate synthase small subunit;protein_id=WP_001171826.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	6840	7625	.	-	.	ID=gene-STY7866_RS16840;Name=STY7866_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16840
NZ_CAAR01000457.1	Protein Homology	CDS	6840	7625	.	-	0	ID=cds-WP_000448638.1;Parent=gene-STY7866_RS16840;Dbxref=Genbank:WP_000448638.1;Name=WP_000448638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458143.1;locus_tag=STY7866_RS16840;product=DeoR family transcriptional regulator;protein_id=WP_000448638.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	7939	8859	.	+	.	ID=gene-STY7866_RS16845;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=STY7866_RS16845
NZ_CAAR01000457.1	Protein Homology	CDS	7939	8859	.	+	0	ID=cds-WP_000350272.1;Parent=gene-STY7866_RS16845;Dbxref=Genbank:WP_000350272.1;Name=WP_000350272.1;gbkey=CDS;gene=rbsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458144.1;locus_tag=STY7866_RS16845;product=ribokinase;protein_id=WP_000350272.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	8890	10206	.	+	.	ID=gene-STY7866_RS16850;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=STY7866_RS16850
NZ_CAAR01000457.1	Protein Homology	CDS	8890	10206	.	+	0	ID=cds-WP_000998359.1;Parent=gene-STY7866_RS16850;Dbxref=Genbank:WP_000998359.1;Name=WP_000998359.1;gbkey=CDS;gene=fucP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458145.1;locus_tag=STY7866_RS16850;product=L-fucose:H+ symporter permease;protein_id=WP_000998359.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	10218	11231	.	+	.	ID=gene-STY7866_RS16855;Name=STY7866_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16855
NZ_CAAR01000457.1	Protein Homology	CDS	10218	11231	.	+	0	ID=cds-WP_000213217.1;Parent=gene-STY7866_RS16855;Dbxref=Genbank:WP_000213217.1;Name=WP_000213217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458146.1;locus_tag=STY7866_RS16855;product=aldose 1-epimerase family protein;protein_id=WP_000213217.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	pseudogene	11385	11976	.	+	.	ID=gene-STY7866_RS16860;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=pseudogene;locus_tag=STY7866_RS16860;pseudo=true
NZ_CAAR01000457.1	Protein Homology	CDS	11385	11976	.	+	0	ID=cds-STY7866_RS16860;Parent=gene-STY7866_RS16860;Note=frameshifted;gbkey=CDS;gene=uhpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458147.1;locus_tag=STY7866_RS16860;product=transcriptional regulator UhpA;pseudo=true;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	11936	13477	.	+	.	ID=gene-STY7866_RS16865;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=STY7866_RS16865
NZ_CAAR01000457.1	Protein Homology	CDS	11936	13477	.	+	0	ID=cds-WP_000174428.1;Parent=gene-STY7866_RS16865;Dbxref=Genbank:WP_000174428.1;Name=WP_000174428.1;gbkey=CDS;gene=uhpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264417.1;locus_tag=STY7866_RS16865;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_000174428.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	pseudogene	13487	14814	.	+	.	ID=gene-STY7866_RS16870;Name=STY7866_RS16870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16870;pseudo=true
NZ_CAAR01000457.1	Protein Homology	CDS	13487	14814	.	+	0	ID=cds-STY7866_RS16870;Parent=gene-STY7866_RS16870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458149.1;locus_tag=STY7866_RS16870;product=MFS transporter;pseudo=true;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	14957	16348	.	+	.	ID=gene-STY7866_RS16875;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=STY7866_RS16875
NZ_CAAR01000457.1	Protein Homology	CDS	14957	16348	.	+	0	ID=cds-WP_000879212.1;Parent=gene-STY7866_RS16875;Dbxref=Genbank:WP_000879212.1;Name=WP_000879212.1;gbkey=CDS;gene=uhpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458150.1;locus_tag=STY7866_RS16875;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879212.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	16541	16993	.	+	.	ID=gene-STY7866_RS16885;Name=STY7866_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16885
NZ_CAAR01000457.1	Protein Homology	CDS	16541	16993	.	+	0	ID=cds-WP_001519640.1;Parent=gene-STY7866_RS16885;Dbxref=Genbank:WP_001519640.1;Name=WP_001519640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=STY7866_RS16885;product=DUF1198 domain-containing protein;protein_id=WP_001519640.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	17346	18089	.	+	.	ID=gene-STY7866_RS16890;Name=STY7866_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16890
NZ_CAAR01000457.1	Protein Homology	CDS	17346	18089	.	+	0	ID=cds-WP_000854956.1;Parent=gene-STY7866_RS16890;Dbxref=Genbank:WP_000854956.1;Name=WP_000854956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458152.1;locus_tag=STY7866_RS16890;product=GntR family transcriptional regulator;protein_id=WP_000854956.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	pseudogene	18107	18580	.	+	.	ID=gene-STY7866_RS16895;Name=STY7866_RS16895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16895;pseudo=true
NZ_CAAR01000457.1	Protein Homology	CDS	18107	18580	.	+	0	ID=cds-STY7866_RS16895;Parent=gene-STY7866_RS16895;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=STY7866_RS16895;product=PTS sugar transporter subunit IIA;pseudo=true;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	18577	18864	.	+	.	ID=gene-STY7866_RS16900;Name=STY7866_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16900
NZ_CAAR01000457.1	Protein Homology	CDS	18577	18864	.	+	0	ID=cds-WP_000041396.1;Parent=gene-STY7866_RS16900;Dbxref=Genbank:WP_000041396.1;Name=WP_000041396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458154.1;locus_tag=STY7866_RS16900;product=PTS sugar transporter subunit IIB;protein_id=WP_000041396.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	18940	20298	.	+	.	ID=gene-STY7866_RS16905;Name=STY7866_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16905
NZ_CAAR01000457.1	Protein Homology	CDS	18940	20298	.	+	0	ID=cds-WP_000997823.1;Parent=gene-STY7866_RS16905;Dbxref=Genbank:WP_000997823.1;Name=WP_000997823.1;Note=with GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol%3B subunit IIC forms the translocation channel and contains the substrate binding site;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458155.1;locus_tag=STY7866_RS16905;product=PTS galactitol transporter subunit IIC;protein_id=WP_000997823.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	20291	21775	.	+	.	ID=gene-STY7866_RS16910;Name=STY7866_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16910
NZ_CAAR01000457.1	Protein Homology	CDS	20291	21775	.	+	0	ID=cds-WP_001113563.1;Parent=gene-STY7866_RS16910;Dbxref=Genbank:WP_001113563.1;Name=WP_001113563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458156.1;locus_tag=STY7866_RS16910;product=carbohydrate kinase;protein_id=WP_001113563.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	pseudogene	21838	22698	.	+	.	ID=gene-STY7866_RS16915;Name=STY7866_RS16915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16915;pseudo=true
NZ_CAAR01000457.1	Protein Homology	CDS	21838	22698	.	+	0	ID=cds-STY7866_RS16915;Parent=gene-STY7866_RS16915;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=STY7866_RS16915;product=class II aldolase;pseudo=true;transl_table=11
NZ_CAAR01000457.1	RefSeq	pseudogene	22708	22978	.	+	.	ID=gene-STY7866_RS16920;Name=STY7866_RS16920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16920;pseudo=true
NZ_CAAR01000457.1	Protein Homology	CDS	22708	22978	.	+	0	ID=cds-STY7866_RS16920;Parent=gene-STY7866_RS16920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458157.1;locus_tag=STY7866_RS16920;product=HPr family phosphocarrier protein;pseudo=true;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	23069	23392	.	-	.	ID=gene-STY7866_RS16925;Name=STY7866_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16925
NZ_CAAR01000457.1	Protein Homology	CDS	23069	23392	.	-	0	ID=cds-WP_001274842.1;Parent=gene-STY7866_RS16925;Dbxref=Genbank:WP_001274842.1;Name=WP_001274842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458158.1;locus_tag=STY7866_RS16925;product=DNA-binding transcriptional regulator;protein_id=WP_001274842.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	pseudogene	23376	23734	.	-	.	ID=gene-STY7866_RS16930;Name=STY7866_RS16930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16930;pseudo=true
NZ_CAAR01000457.1	Protein Homology	CDS	23376	23734	.	-	0	ID=cds-STY7866_RS16930;Parent=gene-STY7866_RS16930;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=STY7866_RS16930;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	23950	25143	.	+	.	ID=gene-STY7866_RS16935;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=STY7866_RS16935
NZ_CAAR01000457.1	Protein Homology	CDS	23950	25143	.	+	0	ID=cds-WP_001004798.1;Parent=gene-STY7866_RS16935;Dbxref=Genbank:WP_001004798.1;Name=WP_001004798.1;gbkey=CDS;gene=nepI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458159.1;locus_tag=STY7866_RS16935;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001004798.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	25203	26585	.	-	.	ID=gene-STY7866_RS16940;Name=STY7866_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16940
NZ_CAAR01000457.1	Protein Homology	CDS	25203	26585	.	-	0	ID=cds-WP_001270464.1;Parent=gene-STY7866_RS16940;Dbxref=Genbank:WP_001270464.1;Name=WP_001270464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458160.1;locus_tag=STY7866_RS16940;product=glycoside hydrolase family 1 protein;protein_id=WP_001270464.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	gene	26691	26984	.	-	.	ID=gene-STY7866_RS16945;Name=STY7866_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16945
NZ_CAAR01000457.1	Protein Homology	CDS	26691	26984	.	-	0	ID=cds-WP_000824217.1;Parent=gene-STY7866_RS16945;Dbxref=Genbank:WP_000824217.1;Name=WP_000824217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458161.1;locus_tag=STY7866_RS16945;product=hypothetical protein;protein_id=WP_000824217.1;transl_table=11
NZ_CAAR01000457.1	RefSeq	pseudogene	27181	27252	.	+	.	ID=gene-STY7866_RS27605;Name=STY7866_RS27605;end_range=27252,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27605;partial=true;pseudo=true
NZ_CAAR01000457.1	Protein Homology	CDS	27181	27252	.	+	0	ID=cds-STY7866_RS27605;Parent=gene-STY7866_RS27605;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=27252,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341509.1;locus_tag=STY7866_RS27605;partial=true;product=NtrC family transcriptional regulator;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000456.1 1 5517
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000456.1	RefSeq	region	1	5517	.	+	.	ID=NZ_CAAR01000456.1:1..5517;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000456.1	RefSeq	pseudogene	1	189	.	+	.	ID=gene-STY7866_RS16780;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=pseudogene;locus_tag=STY7866_RS16780;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000456.1	Protein Homology	CDS	1	189	.	+	0	ID=cds-STY7866_RS16780;Parent=gene-STY7866_RS16780;Note=functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=djlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454706.1;locus_tag=STY7866_RS16780;partial=true;product=co-chaperone DjlA;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000456.1	RefSeq	gene	284	943	.	-	.	ID=gene-STY7866_RS16785;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=STY7866_RS16785
NZ_CAAR01000456.1	Protein Homology	CDS	284	943	.	-	0	ID=cds-WP_000525195.1;Parent=gene-STY7866_RS16785;Dbxref=Genbank:WP_000525195.1;Name=WP_000525195.1;gbkey=CDS;gene=rluA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454707.1;locus_tag=STY7866_RS16785;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525195.1;transl_table=11
NZ_CAAR01000456.1	RefSeq	gene	955	3861	.	-	.	ID=gene-STY7866_RS16790;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=STY7866_RS16790
NZ_CAAR01000456.1	Protein Homology	CDS	955	3861	.	-	0	ID=cds-WP_001116972.1;Parent=gene-STY7866_RS16790;Dbxref=Genbank:WP_001116972.1;Name=WP_001116972.1;gbkey=CDS;gene=rapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=STY7866_RS16790;product=RNA polymerase-associated protein RapA;protein_id=WP_001116972.1;transl_table=11
NZ_CAAR01000456.1	RefSeq	gene	4035	5517	.	-	.	ID=gene-STY7866_RS16795;Name=STY7866_RS16795;end_range=5517,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16795;partial=true
NZ_CAAR01000456.1	Protein Homology	CDS	4035	5517	.	-	1	ID=cds-WP_000408976.1;Parent=gene-STY7866_RS16795;Dbxref=Genbank:WP_000408976.1;Name=WP_000408976.1;end_range=5517,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454709.1;locus_tag=STY7866_RS16795;partial=true;product=DNA polymerase II;protein_id=WP_000408976.1;transl_table=11
##sequence-region NZ_CAAR01000455.1 1 2944
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000455.1	RefSeq	region	1	2944	.	+	.	ID=NZ_CAAR01000455.1:1..2944;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000455.1	RefSeq	pseudogene	1	397	.	+	.	ID=gene-STY7866_RS16755;Name=STY7866_RS16755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16755;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000455.1	Protein Homology	CDS	1	397	.	+	1	ID=cds-STY7866_RS16755;Parent=gene-STY7866_RS16755;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455591.1;locus_tag=STY7866_RS16755;partial=true;product=dipeptidase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000455.1	RefSeq	gene	506	616	.	+	.	ID=gene-STY7866_RS16760;Name=STY7866_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16760
NZ_CAAR01000455.1	Protein Homology	CDS	506	616	.	+	0	ID=cds-WP_000175092.1;Parent=gene-STY7866_RS16760;Dbxref=Genbank:WP_000175092.1;Name=WP_000175092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=STY7866_RS16760;product=hypothetical protein;protein_id=WP_000175092.1;transl_table=11
NZ_CAAR01000455.1	RefSeq	gene	617	787	.	-	.	ID=gene-STY7866_RS16765;Name=STY7866_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16765
NZ_CAAR01000455.1	Protein Homology	CDS	617	787	.	-	0	ID=cds-WP_001111006.1;Parent=gene-STY7866_RS16765;Dbxref=Genbank:WP_001111006.1;Name=WP_001111006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455589.1;locus_tag=STY7866_RS16765;product=YlcI/YnfO family protein;protein_id=WP_001111006.1;transl_table=11
NZ_CAAR01000455.1	RefSeq	gene	1119	2804	.	+	.	ID=gene-STY7866_RS16770;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=STY7866_RS16770
NZ_CAAR01000455.1	Protein Homology	CDS	1119	2804	.	+	0	ID=cds-WP_001166955.1;Parent=gene-STY7866_RS16770;Dbxref=Genbank:WP_001166955.1;Name=WP_001166955.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455588.1;locus_tag=STY7866_RS16770;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WP_001166955.1;transl_table=11
NZ_CAAR01000455.1	RefSeq	pseudogene	2821	2944	.	+	.	ID=gene-STY7866_RS27595;Name=sigE;end_range=2944,.;gbkey=Gene;gene=sigE;gene_biotype=pseudogene;locus_tag=STY7866_RS27595;partial=true;pseudo=true
NZ_CAAR01000455.1	Protein Homology	CDS	2821	2944	.	+	0	ID=cds-STY7866_RS27595;Parent=gene-STY7866_RS27595;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2944,.;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455587.1;locus_tag=STY7866_RS27595;partial=true;product=type III secretion system chaperone SigE;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000454.1 1 116
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000454.1	RefSeq	region	1	116	.	+	.	ID=NZ_CAAR01000454.1:1..116;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000453.1 1 2305
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000453.1	RefSeq	region	1	2305	.	+	.	ID=NZ_CAAR01000453.1:1..2305;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000453.1	RefSeq	gene	182	949	.	-	.	ID=gene-STY7866_RS16740;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=STY7866_RS16740
NZ_CAAR01000453.1	Protein Homology	CDS	182	949	.	-	0	ID=cds-WP_000595629.1;Parent=gene-STY7866_RS16740;Dbxref=Genbank:WP_000595629.1;Name=WP_000595629.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458308.1;locus_tag=STY7866_RS16740;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_000595629.1;transl_table=11
NZ_CAAR01000453.1	RefSeq	gene	1178	2107	.	+	.	ID=gene-STY7866_RS16745;Name=STY7866_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16745
NZ_CAAR01000453.1	Protein Homology	CDS	1178	2107	.	+	0	ID=cds-WP_000037582.1;Parent=gene-STY7866_RS16745;Dbxref=Genbank:WP_000037582.1;Name=WP_000037582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458307.1;locus_tag=STY7866_RS16745;product=sugar kinase;protein_id=WP_000037582.1;transl_table=11
NZ_CAAR01000453.1	RefSeq	pseudogene	2161	2298	.	-	.	ID=gene-STY7866_RS27590;Name=STY7866_RS27590;end_range=2298,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27590;partial=true;pseudo=true
NZ_CAAR01000453.1	Protein Homology	CDS	2161	2298	.	-	0	ID=cds-STY7866_RS27590;Parent=gene-STY7866_RS27590;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2298,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458306.1;locus_tag=STY7866_RS27590;partial=true;product=insulinase family protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000452.1 1 1991
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000452.1	RefSeq	region	1	1991	.	+	.	ID=NZ_CAAR01000452.1:1..1991;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000452.1	RefSeq	gene	1	327	.	+	.	ID=gene-STY7866_RS16720;Name=STY7866_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16720;partial=true;start_range=.,1
NZ_CAAR01000452.1	Protein Homology	CDS	1	327	.	+	0	ID=cds-WP_000541318.1;Parent=gene-STY7866_RS16720;Dbxref=Genbank:WP_000541318.1;Name=WP_000541318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456361.1;locus_tag=STY7866_RS16720;partial=true;product=hypothetical protein;protein_id=WP_000541318.1;start_range=.,1;transl_table=11
NZ_CAAR01000452.1	RefSeq	gene	715	1134	.	-	.	ID=gene-STY7866_RS16725;Name=STY7866_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16725
NZ_CAAR01000452.1	Protein Homology	CDS	715	1134	.	-	0	ID=cds-WP_000354403.1;Parent=gene-STY7866_RS16725;Dbxref=Genbank:WP_000354403.1;Name=WP_000354403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456362.1;locus_tag=STY7866_RS16725;product=GNAT family N-acetyltransferase;protein_id=WP_000354403.1;transl_table=11
NZ_CAAR01000452.1	RefSeq	gene	1264	1458	.	-	.	ID=gene-STY7866_RS27580;Name=STY7866_RS27580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27580
NZ_CAAR01000452.1	Protein Homology	CDS	1264	1458	.	-	0	ID=cds-WP_001525024.1;Parent=gene-STY7866_RS27580;Dbxref=Genbank:WP_001525024.1;Name=WP_001525024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495377.1;locus_tag=STY7866_RS27580;product=hypothetical protein;protein_id=WP_001525024.1;transl_table=11
NZ_CAAR01000452.1	RefSeq	gene	1505	1771	.	+	.	ID=gene-STY7866_RS27585;Name=STY7866_RS27585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27585
NZ_CAAR01000452.1	Protein Homology	CDS	1505	1771	.	+	0	ID=cds-WP_010989185.1;Parent=gene-STY7866_RS27585;Dbxref=Genbank:WP_010989185.1;Name=WP_010989185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=STY7866_RS27585;product=hypothetical protein;protein_id=WP_010989185.1;transl_table=11
##sequence-region NZ_CAAR01000451.1 1 2713
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000451.1	RefSeq	region	1	2713	.	+	.	ID=NZ_CAAR01000451.1:1..2713;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000451.1	RefSeq	gene	40	114	.	+	.	ID=gene-STY7866_RS16705;Name=STY7866_RS16705;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS16705
NZ_CAAR01000451.1	tRNAscan-SE	tRNA	40	114	.	+	.	ID=rna-STY7866_RS16705;Parent=gene-STY7866_RS16705;anticodon=(pos:72..74);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS16705;product=tRNA-Gln
NZ_CAAR01000451.1	tRNAscan-SE	exon	40	114	.	+	.	ID=exon-STY7866_RS16705-1;Parent=rna-STY7866_RS16705;anticodon=(pos:72..74);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS16705;product=tRNA-Gln
NZ_CAAR01000451.1	RefSeq	gene	247	1422	.	-	.	ID=gene-STY7866_RS16710;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=STY7866_RS16710
NZ_CAAR01000451.1	Protein Homology	CDS	247	1422	.	-	0	ID=cds-WP_000184625.1;Parent=gene-STY7866_RS16710;Dbxref=Genbank:WP_000184625.1;Name=WP_000184625.1;gbkey=CDS;gene=ubiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455240.1;locus_tag=STY7866_RS16710;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=WP_000184625.1;transl_table=11
NZ_CAAR01000451.1	RefSeq	gene	1566	2713	.	+	.	ID=gene-STY7866_RS16715;Name=miaB;end_range=2713,.;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=STY7866_RS16715;partial=true
NZ_CAAR01000451.1	Protein Homology	CDS	1566	2713	.	+	0	ID=cds-WP_001764759.1;Parent=gene-STY7866_RS16715;Dbxref=Genbank:WP_001764759.1;Name=WP_001764759.1;end_range=2713,.;gbkey=CDS;gene=miaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=STY7866_RS16715;partial=true;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_001764759.1;transl_table=11
##sequence-region NZ_CAAR01000450.1 1 2391
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000450.1	RefSeq	region	1	2391	.	+	.	ID=NZ_CAAR01000450.1:1..2391;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000450.1	RefSeq	gene	1	133	.	+	.	ID=gene-STY7866_RS27575;Name=STY7866_RS27575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27575;partial=true;start_range=.,1
NZ_CAAR01000450.1	Protein Homology	CDS	1	133	.	+	1	ID=cds-WP_001764754.1;Parent=gene-STY7866_RS27575;Dbxref=Genbank:WP_001764754.1;Name=WP_001764754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455706.1;locus_tag=STY7866_RS27575;partial=true;product=DUF1471 domain-containing protein;protein_id=WP_001764754.1;start_range=.,1;transl_table=11
NZ_CAAR01000450.1	RefSeq	pseudogene	239	1021	.	-	.	ID=gene-STY7866_RS16695;Name=STY7866_RS16695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16695;partial=true;pseudo=true;start_range=.,239
NZ_CAAR01000450.1	Protein Homology	CDS	239	1021	.	-	0	ID=cds-STY7866_RS16695;Parent=gene-STY7866_RS16695;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=STY7866_RS16695;partial=true;product=L%2CD-transpeptidase family protein;pseudo=true;start_range=.,239;transl_table=11
NZ_CAAR01000450.1	RefSeq	pseudogene	1169	2391	.	-	.	ID=gene-STY7866_RS16700;Name=STY7866_RS16700;end_range=2391,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16700;partial=true;pseudo=true
NZ_CAAR01000450.1	Protein Homology	CDS	1169	2391	.	-	2	ID=cds-STY7866_RS16700;Parent=gene-STY7866_RS16700;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2391,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455708.1;locus_tag=STY7866_RS16700;partial=true;product=transcription-repair coupling factor;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000449.1 1 7316
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000449.1	RefSeq	region	1	7316	.	+	.	ID=NZ_CAAR01000449.1:1..7316;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000449.1	RefSeq	gene	184	543	.	+	.	ID=gene-STY7866_RS16640;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=STY7866_RS16640
NZ_CAAR01000449.1	Protein Homology	CDS	184	543	.	+	0	ID=cds-WP_001532068.1;Parent=gene-STY7866_RS16640;Dbxref=Genbank:WP_001532068.1;Name=WP_001532068.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455697.1;locus_tag=STY7866_RS16640;product=purine nucleoside phosphoramidase;protein_id=WP_001532068.1;transl_table=11
NZ_CAAR01000449.1	RefSeq	gene	546	920	.	+	.	ID=gene-STY7866_RS16645;Name=STY7866_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16645
NZ_CAAR01000449.1	Protein Homology	CDS	546	920	.	+	0	ID=cds-WP_000589560.1;Parent=gene-STY7866_RS16645;Dbxref=Genbank:WP_000589560.1;Name=WP_000589560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455698.1;locus_tag=STY7866_RS16645;product=YcfL family protein;protein_id=WP_000589560.1;transl_table=11
NZ_CAAR01000449.1	RefSeq	gene	934	1572	.	+	.	ID=gene-STY7866_RS16650;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=STY7866_RS16650
NZ_CAAR01000449.1	Protein Homology	CDS	934	1572	.	+	0	ID=cds-WP_000164360.1;Parent=gene-STY7866_RS16650;Dbxref=Genbank:WP_000164360.1;Name=WP_000164360.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455699.1;locus_tag=STY7866_RS16650;product=penicillin-binding protein activator LpoB;protein_id=WP_000164360.1;transl_table=11
NZ_CAAR01000449.1	RefSeq	gene	1553	2377	.	+	.	ID=gene-STY7866_RS16655;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=STY7866_RS16655
NZ_CAAR01000449.1	Protein Homology	CDS	1553	2377	.	+	0	ID=cds-WP_001257320.1;Parent=gene-STY7866_RS16655;Dbxref=Genbank:WP_001257320.1;Name=WP_001257320.1;gbkey=CDS;gene=thiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455700.1;locus_tag=STY7866_RS16655;product=thiamine kinase;protein_id=WP_001257320.1;transl_table=11
NZ_CAAR01000449.1	RefSeq	gene	2388	3413	.	+	.	ID=gene-STY7866_RS16660;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=STY7866_RS16660
NZ_CAAR01000449.1	Protein Homology	CDS	2388	3413	.	+	0	ID=cds-WP_000529339.1;Parent=gene-STY7866_RS16660;Dbxref=Genbank:WP_000529339.1;Name=WP_000529339.1;gbkey=CDS;gene=nagZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455701.1;locus_tag=STY7866_RS16660;product=beta-N-acetylhexosaminidase;protein_id=WP_000529339.1;transl_table=11
NZ_CAAR01000449.1	RefSeq	pseudogene	3438	3979	.	+	.	ID=gene-STY7866_RS16665;Name=STY7866_RS16665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16665;pseudo=true
NZ_CAAR01000449.1	Protein Homology	CDS	3438	3979	.	+	0	ID=cds-STY7866_RS16665;Parent=gene-STY7866_RS16665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=STY7866_RS16665;product=alpha/beta hydrolase;pseudo=true;transl_table=11
NZ_CAAR01000449.1	RefSeq	gene	4234	5538	.	+	.	ID=gene-STY7866_RS16670;Name=STY7866_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16670
NZ_CAAR01000449.1	Protein Homology	CDS	4234	5538	.	+	0	ID=cds-WP_000211053.1;Parent=gene-STY7866_RS16670;Dbxref=Genbank:WP_000211053.1;Name=WP_000211053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455703.1;locus_tag=STY7866_RS16670;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000211053.1;transl_table=11
NZ_CAAR01000449.1	RefSeq	gene	5715	6254	.	+	.	ID=gene-STY7866_RS16675;Name=STY7866_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16675
NZ_CAAR01000449.1	Protein Homology	CDS	5715	6254	.	+	0	ID=cds-WP_001043445.1;Parent=gene-STY7866_RS16675;Dbxref=Genbank:WP_001043445.1;Name=WP_001043445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455704.1;locus_tag=STY7866_RS16675;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043445.1;transl_table=11
NZ_CAAR01000449.1	RefSeq	gene	6328	6963	.	-	.	ID=gene-STY7866_RS16680;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=STY7866_RS16680
NZ_CAAR01000449.1	Protein Homology	CDS	6328	6963	.	-	0	ID=cds-WP_000205980.1;Parent=gene-STY7866_RS16680;Dbxref=Genbank:WP_000205980.1;Name=WP_000205980.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455705.1;locus_tag=STY7866_RS16680;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000205980.1;transl_table=11
NZ_CAAR01000449.1	RefSeq	pseudogene	7205	7316	.	+	.	ID=gene-STY7866_RS27570;Name=STY7866_RS27570;end_range=7316,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27570;partial=true;pseudo=true
NZ_CAAR01000449.1	Protein Homology	CDS	7205	7316	.	+	0	ID=cds-STY7866_RS27570;Parent=gene-STY7866_RS27570;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7316,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455706.1;locus_tag=STY7866_RS27570;partial=true;product=multiple stress resistance protein BhsA;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000448.1 1 2744
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000448.1	RefSeq	region	1	2744	.	+	.	ID=NZ_CAAR01000448.1:1..2744;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000448.1	RefSeq	gene	4	1263	.	-	.	ID=gene-STY7866_RS16630;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=STY7866_RS16630
NZ_CAAR01000448.1	Protein Homology	CDS	4	1263	.	-	0	ID=cds-WP_000667159.1;Parent=gene-STY7866_RS16630;Dbxref=Genbank:WP_000667159.1;Name=WP_000667159.1;gbkey=CDS;gene=glpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456828.1;locus_tag=STY7866_RS16630;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_000667159.1;transl_table=11
NZ_CAAR01000448.1	RefSeq	gene	1253	2744	.	-	.	ID=gene-STY7866_RS16635;Name=glpA;end_range=2744,.;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=STY7866_RS16635;partial=true
NZ_CAAR01000448.1	Protein Homology	CDS	1253	2744	.	-	1	ID=cds-WP_000112823.1;Parent=gene-STY7866_RS16635;Dbxref=Genbank:WP_000112823.1;Name=WP_000112823.1;end_range=2744,.;gbkey=CDS;gene=glpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456827.1;locus_tag=STY7866_RS16635;partial=true;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000112823.1;transl_table=11
##sequence-region NZ_CAAR01000447.1 1 7639
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000447.1	RefSeq	region	1	7639	.	+	.	ID=NZ_CAAR01000447.1:1..7639;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000447.1	RefSeq	gene	89	496	.	+	.	ID=gene-STY7866_RS16575;Name=STY7866_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16575
NZ_CAAR01000447.1	Protein Homology	CDS	89	496	.	+	0	ID=cds-WP_001125675.1;Parent=gene-STY7866_RS16575;Dbxref=Genbank:WP_001125675.1;Name=WP_001125675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456393.1;locus_tag=STY7866_RS16575;product=DUF4054 domain-containing protein;protein_id=WP_001125675.1;transl_table=11
NZ_CAAR01000447.1	RefSeq	gene	493	1047	.	+	.	ID=gene-STY7866_RS16580;Name=STY7866_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16580
NZ_CAAR01000447.1	Protein Homology	CDS	493	1047	.	+	0	ID=cds-WP_000008737.1;Parent=gene-STY7866_RS16580;Dbxref=Genbank:WP_000008737.1;Name=WP_000008737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456392.1;locus_tag=STY7866_RS16580;product=hypothetical protein;protein_id=WP_000008737.1;transl_table=11
NZ_CAAR01000447.1	RefSeq	gene	1034	1423	.	+	.	ID=gene-STY7866_RS16585;Name=STY7866_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16585
NZ_CAAR01000447.1	Protein Homology	CDS	1034	1423	.	+	0	ID=cds-WP_001142488.1;Parent=gene-STY7866_RS16585;Dbxref=Genbank:WP_001142488.1;Name=WP_001142488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456391.1;locus_tag=STY7866_RS16585;product=hypothetical protein;protein_id=WP_001142488.1;transl_table=11
NZ_CAAR01000447.1	RefSeq	gene	1398	1961	.	+	.	ID=gene-STY7866_RS16590;Name=STY7866_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16590
NZ_CAAR01000447.1	Protein Homology	CDS	1398	1961	.	+	0	ID=cds-WP_000389379.1;Parent=gene-STY7866_RS16590;Dbxref=Genbank:WP_000389379.1;Name=WP_000389379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455535.1;locus_tag=STY7866_RS16590;product=hypothetical protein;protein_id=WP_000389379.1;transl_table=11
NZ_CAAR01000447.1	RefSeq	gene	1965	3110	.	+	.	ID=gene-STY7866_RS16595;Name=STY7866_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16595
NZ_CAAR01000447.1	Protein Homology	CDS	1965	3110	.	+	0	ID=cds-WP_001135544.1;Parent=gene-STY7866_RS16595;Dbxref=Genbank:WP_001135544.1;Name=WP_001135544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456389.1;locus_tag=STY7866_RS16595;product=DUF3383 domain-containing protein;protein_id=WP_001135544.1;transl_table=11
NZ_CAAR01000447.1	RefSeq	pseudogene	3122	3562	.	+	.	ID=gene-STY7866_RS16600;Name=STY7866_RS16600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16600;pseudo=true
NZ_CAAR01000447.1	Protein Homology	CDS	3122	3562	.	+	0	ID=cds-STY7866_RS16600;Parent=gene-STY7866_RS16600;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456388.1;locus_tag=STY7866_RS16600;product=DUF3277 family protein;pseudo=true;transl_table=11
NZ_CAAR01000447.1	RefSeq	gene	3566	4018	.	+	.	ID=gene-STY7866_RS16605;Name=STY7866_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16605
NZ_CAAR01000447.1	Protein Homology	CDS	3566	4018	.	+	0	ID=cds-WP_000389047.1;Parent=gene-STY7866_RS16605;Dbxref=Genbank:WP_000389047.1;Name=WP_000389047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456387.1;locus_tag=STY7866_RS16605;product=hypothetical protein;protein_id=WP_000389047.1;transl_table=11
NZ_CAAR01000447.1	RefSeq	gene	4030	4206	.	+	.	ID=gene-STY7866_RS27565;Name=STY7866_RS27565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27565
NZ_CAAR01000447.1	Protein Homology	CDS	4030	4206	.	+	0	ID=cds-WP_024131185.1;Parent=gene-STY7866_RS27565;Dbxref=Genbank:WP_024131185.1;Name=WP_024131185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001113920.1;locus_tag=STY7866_RS27565;product=hypothetical protein;protein_id=WP_024131185.1;transl_table=11
NZ_CAAR01000447.1	RefSeq	gene	4196	6148	.	+	.	ID=gene-STY7866_RS16610;Name=STY7866_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16610
NZ_CAAR01000447.1	Protein Homology	CDS	4196	6148	.	+	0	ID=cds-WP_000990867.1;Parent=gene-STY7866_RS16610;Dbxref=Genbank:WP_000990867.1;Name=WP_000990867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456386.1;locus_tag=STY7866_RS16610;product=hypothetical protein;protein_id=WP_000990867.1;transl_table=11
NZ_CAAR01000447.1	RefSeq	gene	6148	6798	.	+	.	ID=gene-STY7866_RS16615;Name=STY7866_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16615
NZ_CAAR01000447.1	Protein Homology	CDS	6148	6798	.	+	0	ID=cds-WP_000346974.1;Parent=gene-STY7866_RS16615;Dbxref=Genbank:WP_000346974.1;Name=WP_000346974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456385.1;locus_tag=STY7866_RS16615;product=hypothetical protein;protein_id=WP_000346974.1;transl_table=11
NZ_CAAR01000447.1	RefSeq	gene	6802	7104	.	+	.	ID=gene-STY7866_RS16620;Name=STY7866_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16620
NZ_CAAR01000447.1	Protein Homology	CDS	6802	7104	.	+	0	ID=cds-WP_000388505.1;Parent=gene-STY7866_RS16620;Dbxref=Genbank:WP_000388505.1;Name=WP_000388505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456384.1;locus_tag=STY7866_RS16620;product=hypothetical protein;protein_id=WP_000388505.1;transl_table=11
NZ_CAAR01000447.1	RefSeq	pseudogene	7107	7639	.	+	.	ID=gene-STY7866_RS16625;Name=STY7866_RS16625;end_range=7639,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16625;partial=true;pseudo=true
NZ_CAAR01000447.1	Protein Homology	CDS	7107	7639	.	+	0	ID=cds-STY7866_RS16625;Parent=gene-STY7866_RS16625;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7639,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456383.1;locus_tag=STY7866_RS16625;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000446.1 1 2961
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000446.1	RefSeq	region	1	2961	.	+	.	ID=NZ_CAAR01000446.1:1..2961;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000446.1	RefSeq	gene	1	347	.	-	.	ID=gene-STY7866_RS16560;Name=STY7866_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16560;partial=true;start_range=.,1
NZ_CAAR01000446.1	Protein Homology	CDS	1	347	.	-	0	ID=cds-WP_001181305.1;Parent=gene-STY7866_RS16560;Dbxref=Genbank:WP_001181305.1;Name=WP_001181305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458873.1;locus_tag=STY7866_RS16560;partial=true;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_001181305.1;start_range=.,1;transl_table=11
NZ_CAAR01000446.1	RefSeq	gene	492	590	.	+	.	ID=gene-STY7866_RS27560;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=STY7866_RS27560
NZ_CAAR01000446.1	Protein Homology	CDS	492	590	.	+	0	ID=cds-WP_105789234.1;Parent=gene-STY7866_RS27560;Dbxref=Genbank:WP_105789234.1;Name=WP_105789234.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:PF17059.3;locus_tag=STY7866_RS27560;product=mgtA regulatory leader peptide MgtL;protein_id=WP_105789234.1;transl_table=11
NZ_CAAR01000446.1	RefSeq	gene	731	2961	.	+	.	ID=gene-STY7866_RS16565;Name=mgtA;end_range=2961,.;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=STY7866_RS16565;partial=true
NZ_CAAR01000446.1	Protein Homology	CDS	731	2961	.	+	0	ID=cds-WP_001764732.1;Parent=gene-STY7866_RS16565;Dbxref=Genbank:WP_001764732.1;Name=WP_001764732.1;end_range=2961,.;gbkey=CDS;gene=mgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458874.1;locus_tag=STY7866_RS16565;partial=true;product=magnesium-translocating P-type ATPase;protein_id=WP_001764732.1;transl_table=11
##sequence-region NZ_CAAR01000445.1 1 727
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000445.1	RefSeq	region	1	727	.	+	.	ID=NZ_CAAR01000445.1:1..727;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000445.1	RefSeq	gene	12	371	.	+	.	ID=gene-STY7866_RS16550;Name=STY7866_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16550
NZ_CAAR01000445.1	Protein Homology	CDS	12	371	.	+	0	ID=cds-WP_000813838.1;Parent=gene-STY7866_RS16550;Dbxref=Genbank:WP_000813838.1;Name=WP_000813838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457932.1;locus_tag=STY7866_RS16550;product=YijD family membrane protein;protein_id=WP_000813838.1;transl_table=11
NZ_CAAR01000445.1	RefSeq	gene	418	727	.	-	.	ID=gene-STY7866_RS16555;Name=STY7866_RS16555;end_range=727,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16555;partial=true
NZ_CAAR01000445.1	Protein Homology	CDS	418	727	.	-	1	ID=cds-WP_000718577.1;Parent=gene-STY7866_RS16555;Dbxref=Genbank:WP_000718577.1;Name=WP_000718577.1;end_range=727,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457931.1;locus_tag=STY7866_RS16555;partial=true;product=SAM-dependent methyltransferase;protein_id=WP_000718577.1;transl_table=11
##sequence-region NZ_CAAR01000444.1 1 925
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000444.1	RefSeq	region	1	925	.	+	.	ID=NZ_CAAR01000444.1:1..925;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000444.1	RefSeq	pseudogene	1	925	.	-	.	ID=gene-STY7866_RS16545;Name=pgtB;end_range=925,.;gbkey=Gene;gene=pgtB;gene_biotype=pseudogene;locus_tag=STY7866_RS16545;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000444.1	Protein Homology	CDS	1	925	.	-	1	ID=cds-STY7866_RS16545;Parent=gene-STY7866_RS16545;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=925,.;gbkey=CDS;gene=pgtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456939.1;locus_tag=STY7866_RS16545;partial=true;product=two-component system sensor histidine kinase PgtB;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000443.1 1 4221
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000443.1	RefSeq	region	1	4221	.	+	.	ID=NZ_CAAR01000443.1:1..4221;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000443.1	RefSeq	gene	1	1182	.	+	.	ID=gene-STY7866_RS16525;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=STY7866_RS16525;partial=true;start_range=.,1
NZ_CAAR01000443.1	Protein Homology	CDS	1	1182	.	+	0	ID=cds-WP_000496510.1;Parent=gene-STY7866_RS16525;Dbxref=Genbank:WP_000496510.1;Name=WP_000496510.1;gbkey=CDS;gene=zraS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457901.1;locus_tag=STY7866_RS16525;partial=true;product=two-component system sensor histidine kinase ZraS;protein_id=WP_000496510.1;start_range=.,1;transl_table=11
NZ_CAAR01000443.1	RefSeq	gene	1188	2513	.	+	.	ID=gene-STY7866_RS16530;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=STY7866_RS16530
NZ_CAAR01000443.1	Protein Homology	CDS	1188	2513	.	+	0	ID=cds-WP_000617932.1;Parent=gene-STY7866_RS16530;Dbxref=Genbank:WP_000617932.1;Name=WP_000617932.1;gbkey=CDS;gene=zraR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457900.1;locus_tag=STY7866_RS16530;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_000617932.1;transl_table=11
NZ_CAAR01000443.1	RefSeq	gene	2510	3799	.	-	.	ID=gene-STY7866_RS16535;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=STY7866_RS16535
NZ_CAAR01000443.1	Protein Homology	CDS	2510	3799	.	-	0	ID=cds-WP_000866776.1;Parent=gene-STY7866_RS16535;Dbxref=Genbank:WP_000866776.1;Name=WP_000866776.1;gbkey=CDS;gene=purD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457899.1;locus_tag=STY7866_RS16535;product=phosphoribosylamine--glycine ligase;protein_id=WP_000866776.1;transl_table=11
NZ_CAAR01000443.1	RefSeq	pseudogene	3815	4221	.	-	.	ID=gene-STY7866_RS16540;Name=purH;end_range=4221,.;gbkey=Gene;gene=purH;gene_biotype=pseudogene;locus_tag=STY7866_RS16540;partial=true;pseudo=true
NZ_CAAR01000443.1	Protein Homology	CDS	3815	4221	.	-	2	ID=cds-STY7866_RS16540;Parent=gene-STY7866_RS16540;Note=involved in de novo purine biosynthesis%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4221,.;gbkey=CDS;gene=purH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=STY7866_RS16540;partial=true;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000442.1 1 930
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000442.1	RefSeq	region	1	930	.	+	.	ID=NZ_CAAR01000442.1:1..930;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000442.1	RefSeq	gene	1	930	.	-	.	ID=gene-STY7866_RS16520;Name=STY7866_RS16520;end_range=930,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16520;partial=true;start_range=.,1
NZ_CAAR01000442.1	Protein Homology	CDS	1	930	.	-	0	ID=cds-WP_000298866.1;Parent=gene-STY7866_RS16520;Dbxref=Genbank:WP_000298866.1;Name=WP_000298866.1;end_range=930,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=STY7866_RS16520;partial=true;product=alanine transaminase;protein_id=WP_000298866.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000441.1 1 6261
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000441.1	RefSeq	region	1	6261	.	+	.	ID=NZ_CAAR01000441.1:1..6261;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000441.1	RefSeq	pseudogene	75	2920	.	+	.	ID=gene-STY7866_RS16505;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=pseudogene;locus_tag=STY7866_RS16505;pseudo=true
NZ_CAAR01000441.1	Protein Homology	CDS	75	2920	.	+	0	ID=cds-STY7866_RS16505;Parent=gene-STY7866_RS16505;Note=frameshifted;gbkey=CDS;gene=rcsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456815.1;locus_tag=STY7866_RS16505;product=two-component system sensor histidine kinase RcsC;pseudo=true;transl_table=11
NZ_CAAR01000441.1	RefSeq	gene	3023	3673	.	-	.	ID=gene-STY7866_RS16510;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=STY7866_RS16510
NZ_CAAR01000441.1	Protein Homology	CDS	3023	3673	.	-	0	ID=cds-WP_001061910.1;Parent=gene-STY7866_RS16510;Dbxref=Genbank:WP_001061910.1;Name=WP_001061910.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456814.1;locus_tag=STY7866_RS16510;product=transcriptional regulator RcsB;protein_id=WP_001061910.1;transl_table=11
NZ_CAAR01000441.1	RefSeq	gene	3690	6261	.	-	.	ID=gene-STY7866_RS16515;Name=rcsD;end_range=6261,.;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=STY7866_RS16515;partial=true
NZ_CAAR01000441.1	Protein Homology	CDS	3690	6261	.	-	1	ID=cds-WP_000538686.1;Parent=gene-STY7866_RS16515;Dbxref=Genbank:WP_000538686.1;Name=WP_000538686.1;end_range=6261,.;gbkey=CDS;gene=rcsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456813.1;locus_tag=STY7866_RS16515;partial=true;product=phosphotransferase RcsD;protein_id=WP_000538686.1;transl_table=11
##sequence-region NZ_CAAR01000440.1 1 20213
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000440.1	RefSeq	region	1	20213	.	+	.	ID=NZ_CAAR01000440.1:1..20213;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000440.1	RefSeq	gene	34	240	.	-	.	ID=gene-STY7866_RS16375;Name=STY7866_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16375
NZ_CAAR01000440.1	Protein Homology	CDS	34	240	.	-	0	ID=cds-WP_000689229.1;Parent=gene-STY7866_RS16375;Dbxref=Genbank:WP_000689229.1;Name=WP_000689229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=STY7866_RS16375;product=DUF1107 domain-containing protein;protein_id=WP_000689229.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	567	1124	.	+	.	ID=gene-STY7866_RS16380;Name=STY7866_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16380
NZ_CAAR01000440.1	Protein Homology	CDS	567	1124	.	+	0	ID=cds-WP_000175301.1;Parent=gene-STY7866_RS16380;Dbxref=Genbank:WP_000175301.1;Name=WP_000175301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458841.1;locus_tag=STY7866_RS16380;product=YtfJ family protein;protein_id=WP_000175301.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	1114	1854	.	-	.	ID=gene-STY7866_RS16385;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=STY7866_RS16385
NZ_CAAR01000440.1	Protein Homology	CDS	1114	1854	.	-	0	ID=cds-WP_000893398.1;Parent=gene-STY7866_RS16385;Dbxref=Genbank:WP_000893398.1;Name=WP_000893398.1;gbkey=CDS;gene=cysQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=STY7866_RS16385;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000893398.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	2121	4064	.	+	.	ID=gene-STY7866_RS16390;Name=STY7866_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16390
NZ_CAAR01000440.1	Protein Homology	CDS	2121	4064	.	+	0	ID=cds-WP_000589381.1;Parent=gene-STY7866_RS16390;Dbxref=Genbank:WP_000589381.1;Name=WP_000589381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458839.1;locus_tag=STY7866_RS16390;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_000589381.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	4122	4508	.	-	.	ID=gene-STY7866_RS16395;Name=STY7866_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16395
NZ_CAAR01000440.1	Protein Homology	CDS	4122	4508	.	-	0	ID=cds-WP_001201297.1;Parent=gene-STY7866_RS16395;Dbxref=Genbank:WP_001201297.1;Name=WP_001201297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458838.1;locus_tag=STY7866_RS16395;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_001201297.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	4596	5444	.	+	.	ID=gene-STY7866_RS16400;Name=STY7866_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16400
NZ_CAAR01000440.1	Protein Homology	CDS	4596	5444	.	+	0	ID=cds-WP_000560623.1;Parent=gene-STY7866_RS16400;Dbxref=Genbank:WP_000560623.1;Name=WP_000560623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458837.1;locus_tag=STY7866_RS16400;product=SDR family oxidoreductase;protein_id=WP_000560623.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	5525	6490	.	+	.	ID=gene-STY7866_RS16405;Name=STY7866_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16405
NZ_CAAR01000440.1	Protein Homology	CDS	5525	6490	.	+	0	ID=cds-WP_000623287.1;Parent=gene-STY7866_RS16405;Dbxref=Genbank:WP_000623287.1;Name=WP_000623287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458836.1;locus_tag=STY7866_RS16405;product=DMT family transporter;protein_id=WP_000623287.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	6593	7255	.	+	.	ID=gene-STY7866_RS16410;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=STY7866_RS16410
NZ_CAAR01000440.1	Protein Homology	CDS	6593	7255	.	+	0	ID=cds-WP_000331469.1;Parent=gene-STY7866_RS16410;Dbxref=Genbank:WP_000331469.1;Name=WP_000331469.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458835.1;locus_tag=STY7866_RS16410;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331469.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	7322	8710	.	-	.	ID=gene-STY7866_RS16415;Name=STY7866_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16415
NZ_CAAR01000440.1	Protein Homology	CDS	7322	8710	.	-	0	ID=cds-WP_000944334.1;Parent=gene-STY7866_RS16415;Dbxref=Genbank:WP_000944334.1;Name=WP_000944334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458834.1;locus_tag=STY7866_RS16415;product=hypothetical protein;protein_id=WP_000944334.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	8725	9864	.	-	.	ID=gene-STY7866_RS16420;Name=STY7866_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16420
NZ_CAAR01000440.1	Protein Homology	CDS	8725	9864	.	-	0	ID=cds-WP_000155542.1;Parent=gene-STY7866_RS16420;Dbxref=Genbank:WP_000155542.1;Name=WP_000155542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458833.1;locus_tag=STY7866_RS16420;product=hypothetical protein;protein_id=WP_000155542.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	pseudogene	10202	11604	.	-	.	ID=gene-STY7866_RS16425;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=pseudogene;gene_synonym=dagA;locus_tag=STY7866_RS16425;pseudo=true
NZ_CAAR01000440.1	Protein Homology	CDS	10202	11604	.	-	0	ID=cds-STY7866_RS16425;Parent=gene-STY7866_RS16425;Note=frameshifted;gbkey=CDS;gene=cycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458832.1;locus_tag=STY7866_RS16425;product=D-serine/D-alanine/glycine transporter;pseudo=true;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	11900	12562	.	-	.	ID=gene-STY7866_RS16430;Name=STY7866_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16430
NZ_CAAR01000440.1	Protein Homology	CDS	11900	12562	.	-	0	ID=cds-WP_001663320.1;Parent=gene-STY7866_RS16430;Dbxref=Genbank:WP_001663320.1;Name=WP_001663320.1;Note=FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458831.3;locus_tag=STY7866_RS16430;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_001663320.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	12740	13375	.	+	.	ID=gene-STY7866_RS16435;Name=STY7866_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16435
NZ_CAAR01000440.1	Protein Homology	CDS	12740	13375	.	+	0	ID=cds-WP_001119449.1;Parent=gene-STY7866_RS16435;Dbxref=Genbank:WP_001119449.1;Name=WP_001119449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458830.1;locus_tag=STY7866_RS16435;product=hypothetical protein;protein_id=WP_001119449.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	13425	14351	.	-	.	ID=gene-STY7866_RS16440;Name=STY7866_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16440
NZ_CAAR01000440.1	Protein Homology	CDS	13425	14351	.	-	0	ID=cds-WP_000381075.1;Parent=gene-STY7866_RS16440;Dbxref=Genbank:WP_000381075.1;Name=WP_000381075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=STY7866_RS16440;product=DMT family transporter;protein_id=WP_000381075.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	14499	14948	.	-	.	ID=gene-STY7866_RS16445;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=STY7866_RS16445
NZ_CAAR01000440.1	Protein Homology	CDS	14499	14948	.	-	0	ID=cds-WP_001196065.1;Parent=gene-STY7866_RS16445;Dbxref=Genbank:WP_001196065.1;Name=WP_001196065.1;gbkey=CDS;gene=rplI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=STY7866_RS16445;product=50S ribosomal protein L9;protein_id=WP_001196065.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	14990	15217	.	-	.	ID=gene-STY7866_RS16450;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=STY7866_RS16450
NZ_CAAR01000440.1	Protein Homology	CDS	14990	15217	.	-	0	ID=cds-WP_000135199.1;Parent=gene-STY7866_RS16450;Dbxref=Genbank:WP_000135199.1;Name=WP_000135199.1;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=STY7866_RS16450;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	15222	15536	.	-	.	ID=gene-STY7866_RS16455;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=STY7866_RS16455
NZ_CAAR01000440.1	Protein Homology	CDS	15222	15536	.	-	0	ID=cds-WP_001768658.1;Parent=gene-STY7866_RS16455;Dbxref=Genbank:WP_001768658.1;Name=WP_001768658.1;gbkey=CDS;gene=priB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001315977.1;locus_tag=STY7866_RS16455;product=primosomal replication protein N;protein_id=WP_001768658.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	15543	15938	.	-	.	ID=gene-STY7866_RS16460;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=STY7866_RS16460
NZ_CAAR01000440.1	Protein Homology	CDS	15543	15938	.	-	0	ID=cds-WP_001216673.1;Parent=gene-STY7866_RS16460;Dbxref=Genbank:WP_001216673.1;Name=WP_001216673.1;gbkey=CDS;gene=rpsF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=STY7866_RS16460;product=30S ribosomal protein S6;protein_id=WP_001216673.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	16009	16215	.	-	.	ID=gene-STY7866_RS16465;Name=STY7866_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16465
NZ_CAAR01000440.1	Protein Homology	CDS	16009	16215	.	-	0	ID=cds-WP_010989307.1;Parent=gene-STY7866_RS16465;Dbxref=Genbank:WP_010989307.1;Name=WP_010989307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463251.1;locus_tag=STY7866_RS16465;product=hypothetical protein;protein_id=WP_010989307.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	16288	16485	.	+	.	ID=gene-STY7866_RS27555;Name=STY7866_RS27555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27555
NZ_CAAR01000440.1	Protein Homology	CDS	16288	16485	.	+	0	ID=cds-WP_014341576.1;Parent=gene-STY7866_RS27555;Dbxref=Genbank:WP_014341576.1;Name=WP_014341576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535839.1;locus_tag=STY7866_RS27555;product=hypothetical protein;protein_id=WP_014341576.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	16409	16684	.	+	.	ID=gene-STY7866_RS16470;Name=STY7866_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16470
NZ_CAAR01000440.1	Protein Homology	CDS	16409	16684	.	+	0	ID=cds-WP_001756165.1;Parent=gene-STY7866_RS16470;Dbxref=Genbank:WP_001756165.1;Name=WP_001756165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458823.1;locus_tag=STY7866_RS16470;product=DUF1471 domain-containing protein;protein_id=WP_001756165.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	16814	17500	.	-	.	ID=gene-STY7866_RS16475;Name=STY7866_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16475
NZ_CAAR01000440.1	Protein Homology	CDS	16814	17500	.	-	0	ID=cds-WP_001170772.1;Parent=gene-STY7866_RS16475;Dbxref=Genbank:WP_001170772.1;Name=WP_001170772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458822.1;locus_tag=STY7866_RS16475;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_001170772.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	17500	18354	.	-	.	ID=gene-STY7866_RS16480;Name=STY7866_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16480
NZ_CAAR01000440.1	Protein Homology	CDS	17500	18354	.	-	0	ID=cds-WP_000949528.1;Parent=gene-STY7866_RS16480;Dbxref=Genbank:WP_000949528.1;Name=WP_000949528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458821.1;locus_tag=STY7866_RS16480;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_000949528.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	18364	19014	.	-	.	ID=gene-STY7866_RS16485;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=STY7866_RS16485
NZ_CAAR01000440.1	Protein Homology	CDS	18364	19014	.	-	0	ID=cds-WP_000056755.1;Parent=gene-STY7866_RS16485;Dbxref=Genbank:WP_000056755.1;Name=WP_000056755.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458820.1;locus_tag=STY7866_RS16485;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056755.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	19028	19492	.	-	.	ID=gene-STY7866_RS16490;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=STY7866_RS16490
NZ_CAAR01000440.1	Protein Homology	CDS	19028	19492	.	-	0	ID=cds-WP_000776536.1;Parent=gene-STY7866_RS16490;Dbxref=Genbank:WP_000776536.1;Name=WP_000776536.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458819.1;locus_tag=STY7866_RS16490;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776536.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	gene	19502	19807	.	-	.	ID=gene-STY7866_RS16495;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=STY7866_RS16495
NZ_CAAR01000440.1	Protein Homology	CDS	19502	19807	.	-	0	ID=cds-WP_000218360.1;Parent=gene-STY7866_RS16495;Dbxref=Genbank:WP_000218360.1;Name=WP_000218360.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458818.1;locus_tag=STY7866_RS16495;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218360.1;transl_table=11
NZ_CAAR01000440.1	RefSeq	pseudogene	19823	20213	.	-	.	ID=gene-STY7866_RS16500;Name=STY7866_RS16500;end_range=20213,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16500;partial=true;pseudo=true
NZ_CAAR01000440.1	Protein Homology	CDS	19823	20213	.	-	1	ID=cds-STY7866_RS16500;Parent=gene-STY7866_RS16500;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=20213,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=STY7866_RS16500;partial=true;product=PTS ascorbate transporter subunit IIC;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000439.1 1 1432
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000439.1	RefSeq	region	1	1432	.	+	.	ID=NZ_CAAR01000439.1:1..1432;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000439.1	RefSeq	pseudogene	1	699	.	-	.	ID=gene-STY7866_RS16360;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=pseudogene;gene_synonym=cutF;locus_tag=STY7866_RS16360;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000439.1	Protein Homology	CDS	1	699	.	-	0	ID=cds-STY7866_RS16360;Parent=gene-STY7866_RS16360;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.%3B frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454849.1;locus_tag=STY7866_RS16360;partial=true;product=envelope stress response activation lipoprotein NlpE;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000439.1	RefSeq	gene	731	1153	.	-	.	ID=gene-STY7866_RS16365;Name=STY7866_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16365
NZ_CAAR01000439.1	Protein Homology	CDS	731	1153	.	-	0	ID=cds-WP_000560526.1;Parent=gene-STY7866_RS16365;Dbxref=Genbank:WP_000560526.1;Name=WP_000560526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454848.1;locus_tag=STY7866_RS16365;product=aminoacyl-tRNA hydrolase;protein_id=WP_000560526.1;transl_table=11
NZ_CAAR01000439.1	RefSeq	pseudogene	1150	1432	.	-	.	ID=gene-STY7866_RS16370;Name=STY7866_RS16370;end_range=1432,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16370;partial=true;pseudo=true
NZ_CAAR01000439.1	Protein Homology	CDS	1150	1432	.	-	1	ID=cds-STY7866_RS16370;Parent=gene-STY7866_RS16370;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1432,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454847.1;locus_tag=STY7866_RS16370;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000438.1 1 785
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000438.1	RefSeq	region	1	785	.	+	.	ID=NZ_CAAR01000438.1:1..785;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000438.1	RefSeq	pseudogene	195	785	.	-	.	ID=gene-STY7866_RS16355;Name=trmJ;end_range=785,.;gbkey=Gene;gene=trmJ;gene_biotype=pseudogene;locus_tag=STY7866_RS16355;partial=true;pseudo=true
NZ_CAAR01000438.1	Protein Homology	CDS	195	785	.	-	2	ID=cds-STY7866_RS16355;Parent=gene-STY7866_RS16355;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=785,.;gbkey=CDS;gene=trmJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457076.1;locus_tag=STY7866_RS16355;partial=true;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000437.1 1 20606
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000437.1	RefSeq	region	1	20606	.	+	.	ID=NZ_CAAR01000437.1:1..20606;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000437.1	RefSeq	gene	1	899	.	-	.	ID=gene-STY7866_RS16255;Name=STY7866_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16255;partial=true;start_range=.,1
NZ_CAAR01000437.1	Protein Homology	CDS	1	899	.	-	0	ID=cds-WP_024151086.1;Parent=gene-STY7866_RS16255;Dbxref=Genbank:WP_024151086.1;Name=WP_024151086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455470.1;locus_tag=STY7866_RS16255;partial=true;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_024151086.1;start_range=.,1;transl_table=11
NZ_CAAR01000437.1	RefSeq	gene	1130	1414	.	-	.	ID=gene-STY7866_RS16260;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=STY7866_RS16260
NZ_CAAR01000437.1	Protein Homology	CDS	1130	1414	.	-	0	ID=cds-WP_000167332.1;Parent=gene-STY7866_RS16260;Dbxref=Genbank:WP_000167332.1;Name=WP_000167332.1;gbkey=CDS;gene=ihfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455469.1;locus_tag=STY7866_RS16260;product=integration host factor subunit beta;protein_id=WP_000167332.1;transl_table=11
NZ_CAAR01000437.1	RefSeq	gene	1570	3243	.	-	.	ID=gene-STY7866_RS16265;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=STY7866_RS16265
NZ_CAAR01000437.1	Protein Homology	CDS	1570	3243	.	-	0	ID=cds-WP_000140324.1;Parent=gene-STY7866_RS16265;Dbxref=Genbank:WP_000140324.1;Name=WP_000140324.1;gbkey=CDS;gene=rpsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=STY7866_RS16265;product=30S ribosomal protein S1;protein_id=WP_000140324.1;transl_table=11
NZ_CAAR01000437.1	RefSeq	gene	3357	4040	.	-	.	ID=gene-STY7866_RS16270;Name=STY7866_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16270
NZ_CAAR01000437.1	Protein Homology	CDS	3357	4040	.	-	0	ID=cds-WP_000125007.1;Parent=gene-STY7866_RS16270;Dbxref=Genbank:WP_000125007.1;Name=WP_000125007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=STY7866_RS16270;product=(d)CMP kinase;protein_id=WP_000125007.1;transl_table=11
NZ_CAAR01000437.1	RefSeq	gene	4213	4974	.	-	.	ID=gene-STY7866_RS16275;Name=STY7866_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16275
NZ_CAAR01000437.1	Protein Homology	CDS	4213	4974	.	-	0	ID=cds-WP_000792300.1;Parent=gene-STY7866_RS16275;Dbxref=Genbank:WP_000792300.1;Name=WP_000792300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455466.1;locus_tag=STY7866_RS16275;product=M48 family metallopeptidase;protein_id=WP_000792300.1;transl_table=11
NZ_CAAR01000437.1	RefSeq	gene	5116	6399	.	-	.	ID=gene-STY7866_RS16280;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=STY7866_RS16280
NZ_CAAR01000437.1	Protein Homology	CDS	5116	6399	.	-	0	ID=cds-WP_000445205.1;Parent=gene-STY7866_RS16280;Dbxref=Genbank:WP_000445205.1;Name=WP_000445205.1;gbkey=CDS;gene=aroA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455465.1;locus_tag=STY7866_RS16280;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_000445205.1;transl_table=11
NZ_CAAR01000437.1	RefSeq	gene	6470	7558	.	-	.	ID=gene-STY7866_RS16285;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=STY7866_RS16285
NZ_CAAR01000437.1	Protein Homology	CDS	6470	7558	.	-	0	ID=cds-WP_000079590.1;Parent=gene-STY7866_RS16285;Dbxref=Genbank:WP_000079590.1;Name=WP_000079590.1;gbkey=CDS;gene=serC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455464.1;locus_tag=STY7866_RS16285;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000079590.1;transl_table=11
NZ_CAAR01000437.1	RefSeq	gene	7744	8436	.	-	.	ID=gene-STY7866_RS16290;Name=STY7866_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16290
NZ_CAAR01000437.1	Protein Homology	CDS	7744	8436	.	-	0	ID=cds-WP_000642873.1;Parent=gene-STY7866_RS16290;Dbxref=Genbank:WP_000642873.1;Name=WP_000642873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455463.1;locus_tag=STY7866_RS16290;product=DUF421 domain-containing protein;protein_id=WP_000642873.1;transl_table=11
NZ_CAAR01000437.1	RefSeq	gene	8573	10333	.	+	.	ID=gene-STY7866_RS16300;Name=STY7866_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16300
NZ_CAAR01000437.1	Protein Homology	CDS	8573	10333	.	+	0	ID=cds-WP_001764662.1;Parent=gene-STY7866_RS16300;Dbxref=Genbank:WP_001764662.1;Name=WP_001764662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=STY7866_RS16300;product=30S ribosomal protein S12 methylthiotransferase accessory protein YcaO;protein_id=WP_001764662.1;transl_table=11
NZ_CAAR01000437.1	RefSeq	gene	10737	11594	.	+	.	ID=gene-STY7866_RS16305;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=STY7866_RS16305
NZ_CAAR01000437.1	Protein Homology	CDS	10737	11594	.	+	0	ID=cds-WP_000642539.1;Parent=gene-STY7866_RS16305;Dbxref=Genbank:WP_000642539.1;Name=WP_000642539.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455461.1;locus_tag=STY7866_RS16305;product=formate transporter FocA;protein_id=WP_000642539.1;transl_table=11
NZ_CAAR01000437.1	RefSeq	pseudogene	11654	13934	.	+	.	ID=gene-STY7866_RS16310;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=pseudogene;locus_tag=STY7866_RS16310;pseudo=true
NZ_CAAR01000437.1	Protein Homology	CDS	11654	13934	.	+	0	ID=cds-STY7866_RS16310;Parent=gene-STY7866_RS16310;Note=frameshifted;gbkey=CDS;gene=pflB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455460.1;locus_tag=STY7866_RS16310;product=formate C-acetyltransferase;pseudo=true;transl_table=11
NZ_CAAR01000437.1	RefSeq	gene	14010	14969	.	-	.	ID=gene-STY7866_RS16315;Name=STY7866_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16315
NZ_CAAR01000437.1	Protein Homology	CDS	14010	14969	.	-	0	ID=cds-WP_001145573.1;Parent=gene-STY7866_RS16315;Dbxref=Genbank:WP_001145573.1;Name=WP_001145573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=STY7866_RS16315;product=type III secretion system effector SopD2;protein_id=WP_001145573.1;transl_table=11
NZ_CAAR01000437.1	RefSeq	gene	15111	15308	.	+	.	ID=gene-STY7866_RS16320;Name=STY7866_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16320
NZ_CAAR01000437.1	Protein Homology	CDS	15111	15308	.	+	0	ID=cds-WP_031626410.1;Parent=gene-STY7866_RS16320;Dbxref=Genbank:WP_031626410.1;Name=WP_031626410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989135.1;locus_tag=STY7866_RS16320;product=hypothetical protein;protein_id=WP_031626410.1;transl_table=11
NZ_CAAR01000437.1	RefSeq	gene	15515	16339	.	+	.	ID=gene-STY7866_RS16330;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=STY7866_RS16330
NZ_CAAR01000437.1	Protein Homology	CDS	15515	16339	.	+	0	ID=cds-WP_023785365.1;Parent=gene-STY7866_RS16330;Dbxref=Genbank:WP_023785365.1;Name=WP_023785365.1;gbkey=CDS;gene=pflA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459945.3;locus_tag=STY7866_RS16330;product=pyruvate formate lyase 1-activating protein;protein_id=WP_023785365.1;transl_table=11
NZ_CAAR01000437.1	RefSeq	gene	16631	18052	.	-	.	ID=gene-STY7866_RS16335;Name=STY7866_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16335
NZ_CAAR01000437.1	Protein Homology	CDS	16631	18052	.	-	0	ID=cds-WP_001134259.1;Parent=gene-STY7866_RS16335;Dbxref=Genbank:WP_001134259.1;Name=WP_001134259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455457.1;locus_tag=STY7866_RS16335;product=amino acid permease;protein_id=WP_001134259.1;transl_table=11
NZ_CAAR01000437.1	RefSeq	gene	18270	19418	.	-	.	ID=gene-STY7866_RS16340;Name=STY7866_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16340
NZ_CAAR01000437.1	Protein Homology	CDS	18270	19418	.	-	0	ID=cds-WP_000029921.1;Parent=gene-STY7866_RS16340;Dbxref=Genbank:WP_000029921.1;Name=WP_000029921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455456.1;locus_tag=STY7866_RS16340;product=MFS transporter;protein_id=WP_000029921.1;transl_table=11
NZ_CAAR01000437.1	RefSeq	pseudogene	19768	20603	.	-	.	ID=gene-STY7866_RS16350;Name=STY7866_RS16350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16350;pseudo=true
NZ_CAAR01000437.1	Protein Homology	CDS	19768	20603	.	-	0	ID=cds-STY7866_RS16350;Parent=gene-STY7866_RS16350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006685279.1;locus_tag=STY7866_RS16350;product=dimethyl sulfoxide reductase anchor subunit;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000436.1 1 5849
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000436.1	RefSeq	region	1	5849	.	+	.	ID=NZ_CAAR01000436.1:1..5849;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000436.1	RefSeq	gene	1	343	.	-	.	ID=gene-STY7866_RS16220;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=STY7866_RS16220;partial=true;start_range=.,1
NZ_CAAR01000436.1	Protein Homology	CDS	1	343	.	-	0	ID=cds-WP_151260009.1;Parent=gene-STY7866_RS16220;Dbxref=Genbank:WP_151260009.1;Name=WP_151260009.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456596.1;locus_tag=STY7866_RS16220;partial=true;product=propanediol utilization microcompartment protein PduK;protein_id=WP_151260009.1;start_range=.,1;transl_table=11
NZ_CAAR01000436.1	RefSeq	gene	347	622	.	-	.	ID=gene-STY7866_RS16225;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=STY7866_RS16225
NZ_CAAR01000436.1	Protein Homology	CDS	347	622	.	-	0	ID=cds-WP_001057755.1;Parent=gene-STY7866_RS16225;Dbxref=Genbank:WP_001057755.1;Name=WP_001057755.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456595.1;locus_tag=STY7866_RS16225;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_001057755.1;transl_table=11
NZ_CAAR01000436.1	RefSeq	gene	642	992	.	-	.	ID=gene-STY7866_RS16230;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=STY7866_RS16230
NZ_CAAR01000436.1	Protein Homology	CDS	642	992	.	-	0	ID=cds-WP_000377971.1;Parent=gene-STY7866_RS16230;Dbxref=Genbank:WP_000377971.1;Name=WP_000377971.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456594.1;locus_tag=STY7866_RS16230;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WP_000377971.1;transl_table=11
NZ_CAAR01000436.1	RefSeq	gene	982	2814	.	-	.	ID=gene-STY7866_RS16235;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=STY7866_RS16235
NZ_CAAR01000436.1	Protein Homology	CDS	982	2814	.	-	0	ID=cds-WP_001268875.1;Parent=gene-STY7866_RS16235;Dbxref=Genbank:WP_001268875.1;Name=WP_001268875.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456593.1;locus_tag=STY7866_RS16235;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=WP_001268875.1;transl_table=11
NZ_CAAR01000436.1	RefSeq	gene	3021	3542	.	-	.	ID=gene-STY7866_RS16240;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=STY7866_RS16240
NZ_CAAR01000436.1	Protein Homology	CDS	3021	3542	.	-	0	ID=cds-WP_001090601.1;Parent=gene-STY7866_RS16240;Dbxref=Genbank:WP_001090601.1;Name=WP_001090601.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456592.1;locus_tag=STY7866_RS16240;product=propanediol dehydratase small subunit PduE;protein_id=WP_001090601.1;transl_table=11
NZ_CAAR01000436.1	RefSeq	gene	3557	4231	.	-	.	ID=gene-STY7866_RS16245;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=STY7866_RS16245
NZ_CAAR01000436.1	Protein Homology	CDS	3557	4231	.	-	0	ID=cds-WP_000405054.1;Parent=gene-STY7866_RS16245;Dbxref=Genbank:WP_000405054.1;Name=WP_000405054.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456591.1;locus_tag=STY7866_RS16245;product=propanediol dehydratase medium subunit PduD;protein_id=WP_000405054.1;transl_table=11
NZ_CAAR01000436.1	RefSeq	gene	4242	5849	.	-	.	ID=gene-STY7866_RS16250;Name=pduC;end_range=5849,.;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=STY7866_RS16250;partial=true
NZ_CAAR01000436.1	Protein Homology	CDS	4242	5849	.	-	0	ID=cds-WP_000322255.1;Parent=gene-STY7866_RS16250;Dbxref=Genbank:WP_000322255.1;Name=WP_000322255.1;end_range=5849,.;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456590.1;locus_tag=STY7866_RS16250;partial=true;product=propanediol dehydratase large subunit PduC;protein_id=WP_000322255.1;transl_table=11
##sequence-region NZ_CAAR01000435.1 1 14477
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000435.1	RefSeq	region	1	14477	.	+	.	ID=NZ_CAAR01000435.1:1..14477;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000435.1	RefSeq	gene	1	174	.	-	.	ID=gene-STY7866_RS27545;Name=STY7866_RS27545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27545;partial=true;start_range=.,1
NZ_CAAR01000435.1	Protein Homology	CDS	1	174	.	-	0	ID=cds-WP_001764643.1;Parent=gene-STY7866_RS27545;Dbxref=Genbank:WP_001764643.1;Name=WP_001764643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456827.1;locus_tag=STY7866_RS27545;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_001764643.1;start_range=.,1;transl_table=11
NZ_CAAR01000435.1	RefSeq	gene	407	1663	.	+	.	ID=gene-STY7866_RS16155;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=STY7866_RS16155
NZ_CAAR01000435.1	Protein Homology	CDS	407	1663	.	+	0	ID=cds-WP_001764645.1;Parent=gene-STY7866_RS16155;Dbxref=Genbank:WP_001764645.1;Name=WP_001764645.1;gbkey=CDS;gene=glpT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764645.1;locus_tag=STY7866_RS16155;product=glycerol-3-phosphate transporter;protein_id=WP_001764645.1;transl_table=11
NZ_CAAR01000435.1	RefSeq	gene	1657	1764	.	+	.	ID=gene-STY7866_RS27550;Name=STY7866_RS27550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27550
NZ_CAAR01000435.1	GeneMarkS-2+	CDS	1657	1764	.	+	0	ID=cds-WP_000245033.1;Parent=gene-STY7866_RS27550;Dbxref=Genbank:WP_000245033.1;Name=WP_000245033.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=STY7866_RS27550;product=hypothetical protein;protein_id=WP_000245033.1;transl_table=11
NZ_CAAR01000435.1	RefSeq	gene	1769	2839	.	+	.	ID=gene-STY7866_RS16165;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=STY7866_RS16165
NZ_CAAR01000435.1	Protein Homology	CDS	1769	2839	.	+	0	ID=cds-WP_000858949.1;Parent=gene-STY7866_RS16165;Dbxref=Genbank:WP_000858949.1;Name=WP_000858949.1;gbkey=CDS;gene=glpQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456825.1;locus_tag=STY7866_RS16165;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000858949.1;transl_table=11
NZ_CAAR01000435.1	RefSeq	gene	2955	3833	.	-	.	ID=gene-STY7866_RS16170;Name=STY7866_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16170
NZ_CAAR01000435.1	Protein Homology	CDS	2955	3833	.	-	0	ID=cds-WP_000176729.1;Parent=gene-STY7866_RS16170;Dbxref=Genbank:WP_000176729.1;Name=WP_000176729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456824.1;locus_tag=STY7866_RS16170;product=LysR family transcriptional regulator;protein_id=WP_000176729.1;transl_table=11
NZ_CAAR01000435.1	RefSeq	gene	4009	5184	.	+	.	ID=gene-STY7866_RS16175;Name=STY7866_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16175
NZ_CAAR01000435.1	Protein Homology	CDS	4009	5184	.	+	0	ID=cds-WP_001764647.1;Parent=gene-STY7866_RS16175;Dbxref=Genbank:WP_001764647.1;Name=WP_001764647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550297.1;locus_tag=STY7866_RS16175;product=MFS transporter;protein_id=WP_001764647.1;transl_table=11
NZ_CAAR01000435.1	RefSeq	gene	5186	5440	.	-	.	ID=gene-STY7866_RS16180;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=STY7866_RS16180
NZ_CAAR01000435.1	Protein Homology	CDS	5186	5440	.	-	0	ID=cds-WP_000533921.1;Parent=gene-STY7866_RS16180;Dbxref=Genbank:WP_000533921.1;Name=WP_000533921.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456822.1;locus_tag=STY7866_RS16180;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000533921.1;transl_table=11
NZ_CAAR01000435.1	RefSeq	gene	5440	6570	.	-	.	ID=gene-STY7866_RS16185;Name=STY7866_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16185
NZ_CAAR01000435.1	Protein Homology	CDS	5440	6570	.	-	0	ID=cds-WP_000332026.1;Parent=gene-STY7866_RS16185;Dbxref=Genbank:WP_000332026.1;Name=WP_000332026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=STY7866_RS16185;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_000332026.1;transl_table=11
NZ_CAAR01000435.1	RefSeq	gene	6683	8968	.	-	.	ID=gene-STY7866_RS16190;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=STY7866_RS16190
NZ_CAAR01000435.1	Protein Homology	CDS	6683	8968	.	-	0	ID=cds-WP_001076502.1;Parent=gene-STY7866_RS16190;Dbxref=Genbank:WP_001076502.1;Name=WP_001076502.1;gbkey=CDS;gene=nrdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=STY7866_RS16190;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001076502.1;transl_table=11
NZ_CAAR01000435.1	RefSeq	gene	9323	10051	.	-	.	ID=gene-STY7866_RS16195;Name=STY7866_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16195
NZ_CAAR01000435.1	Protein Homology	CDS	9323	10051	.	-	0	ID=cds-WP_001091011.1;Parent=gene-STY7866_RS16195;Dbxref=Genbank:WP_001091011.1;Name=WP_001091011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456819.1;locus_tag=STY7866_RS16195;product=bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase;protein_id=WP_001091011.1;transl_table=11
NZ_CAAR01000435.1	RefSeq	pseudogene	10134	11019	.	-	.	ID=gene-STY7866_RS16200;Name=STY7866_RS16200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16200;pseudo=true
NZ_CAAR01000435.1	Protein Homology	CDS	10134	11019	.	-	0	ID=cds-STY7866_RS16200;Parent=gene-STY7866_RS16200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=STY7866_RS16200;product=GntR family transcriptional regulator;pseudo=true;transl_table=11
NZ_CAAR01000435.1	RefSeq	pseudogene	11069	12395	.	+	.	ID=gene-STY7866_RS16205;Name=STY7866_RS16205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16205;pseudo=true
NZ_CAAR01000435.1	Protein Homology	CDS	11069	12395	.	+	0	ID=cds-STY7866_RS16205;Parent=gene-STY7866_RS16205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=STY7866_RS16205;product=MFS transporter;pseudo=true;transl_table=11
NZ_CAAR01000435.1	RefSeq	gene	12410	13612	.	+	.	ID=gene-STY7866_RS16210;Name=STY7866_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16210
NZ_CAAR01000435.1	Protein Homology	CDS	12410	13612	.	+	0	ID=cds-WP_000705594.1;Parent=gene-STY7866_RS16210;Dbxref=Genbank:WP_000705594.1;Name=WP_000705594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456818.1;locus_tag=STY7866_RS16210;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000705594.1;transl_table=11
NZ_CAAR01000435.1	RefSeq	pseudogene	14022	14477	.	+	.	ID=gene-STY7866_RS26455;Name=STY7866_RS26455;end_range=14477,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26455;partial=true;pseudo=true
NZ_CAAR01000435.1	Protein Homology	CDS	14022	14477	.	+	0	ID=cds-STY7866_RS26455;Parent=gene-STY7866_RS26455;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=14477,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456817.1;locus_tag=STY7866_RS26455;partial=true;product=DNA gyrase subunit A;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000434.1 1 2864
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000434.1	RefSeq	region	1	2864	.	+	.	ID=NZ_CAAR01000434.1:1..2864;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000434.1	RefSeq	gene	1	917	.	-	.	ID=gene-STY7866_RS16125;Name=STY7866_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16125;partial=true;start_range=.,1
NZ_CAAR01000434.1	Protein Homology	CDS	1	917	.	-	0	ID=cds-WP_001764633.1;Parent=gene-STY7866_RS16125;Dbxref=Genbank:WP_001764633.1;Name=WP_001764633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458540.1;locus_tag=STY7866_RS16125;partial=true;product=conjugal transfer protein TraF;protein_id=WP_001764633.1;start_range=.,1;transl_table=11
NZ_CAAR01000434.1	RefSeq	gene	1164	1679	.	+	.	ID=gene-STY7866_RS16130;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=STY7866_RS16130
NZ_CAAR01000434.1	Protein Homology	CDS	1164	1679	.	+	0	ID=cds-WP_000416271.1;Parent=gene-STY7866_RS16130;Dbxref=Genbank:WP_000416271.1;Name=WP_000416271.1;gbkey=CDS;gene=zur;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458539.1;locus_tag=STY7866_RS16130;product=zinc uptake transcriptional repressor Zur;protein_id=WP_000416271.1;transl_table=11
NZ_CAAR01000434.1	RefSeq	gene	1779	1988	.	-	.	ID=gene-STY7866_RS16135;Name=STY7866_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16135
NZ_CAAR01000434.1	Protein Homology	CDS	1779	1988	.	-	0	ID=cds-WP_001030592.1;Parent=gene-STY7866_RS16135;Dbxref=Genbank:WP_001030592.1;Name=WP_001030592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132658.1;locus_tag=STY7866_RS16135;product=CsbD family protein;protein_id=WP_001030592.1;transl_table=11
NZ_CAAR01000434.1	RefSeq	gene	2010	2123	.	-	.	ID=gene-STY7866_RS16140;Name=STY7866_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16140
NZ_CAAR01000434.1	Protein Homology	CDS	2010	2123	.	-	0	ID=cds-WP_077905026.1;Parent=gene-STY7866_RS16140;Dbxref=Genbank:WP_077905026.1;Name=WP_077905026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=STY7866_RS16140;product=hypothetical protein;protein_id=WP_077905026.1;transl_table=11
NZ_CAAR01000434.1	RefSeq	gene	2120	2864	.	-	.	ID=gene-STY7866_RS16145;Name=dinF;end_range=2864,.;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=STY7866_RS16145;partial=true
NZ_CAAR01000434.1	Protein Homology	CDS	2120	2864	.	-	1	ID=cds-WP_000321841.1;Parent=gene-STY7866_RS16145;Dbxref=Genbank:WP_000321841.1;Name=WP_000321841.1;end_range=2864,.;gbkey=CDS;gene=dinF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458536.1;locus_tag=STY7866_RS16145;partial=true;product=MATE family efflux transporter DinF;protein_id=WP_000321841.1;transl_table=11
##sequence-region NZ_CAAR01000433.1 1 1523
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000433.1	RefSeq	region	1	1523	.	+	.	ID=NZ_CAAR01000433.1:1..1523;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000433.1	RefSeq	gene	1	322	.	-	.	ID=gene-STY7866_RS16110;Name=STY7866_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16110;partial=true;start_range=.,1
NZ_CAAR01000433.1	Protein Homology	CDS	1	322	.	-	0	ID=cds-WP_000096918.1;Parent=gene-STY7866_RS16110;Dbxref=Genbank:WP_000096918.1;Name=WP_000096918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455320.1;locus_tag=STY7866_RS16110;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_000096918.1;start_range=.,1;transl_table=11
NZ_CAAR01000433.1	RefSeq	gene	390	1178	.	-	.	ID=gene-STY7866_RS16115;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=STY7866_RS16115
NZ_CAAR01000433.1	Protein Homology	CDS	390	1178	.	-	0	ID=cds-WP_001147416.1;Parent=gene-STY7866_RS16115;Dbxref=Genbank:WP_001147416.1;Name=WP_001147416.1;gbkey=CDS;gene=modE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455321.1;locus_tag=STY7866_RS16115;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147416.1;transl_table=11
NZ_CAAR01000433.1	RefSeq	gene	1307	1456	.	+	.	ID=gene-STY7866_RS16120;Name=STY7866_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16120
NZ_CAAR01000433.1	Protein Homology	CDS	1307	1456	.	+	0	ID=cds-WP_000891513.1;Parent=gene-STY7866_RS16120;Dbxref=Genbank:WP_000891513.1;Name=WP_000891513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=STY7866_RS16120;product=multidrug efflux pump-associated protein%2C AcrZ family;protein_id=WP_000891513.1;transl_table=11
##sequence-region NZ_CAAR01000432.1 1 2354
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000432.1	RefSeq	region	1	2354	.	+	.	ID=NZ_CAAR01000432.1:1..2354;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000432.1	RefSeq	gene	1	144	.	+	.	ID=gene-STY7866_RS16095;Name=STY7866_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16095;partial=true;start_range=.,1
NZ_CAAR01000432.1	Protein Homology	CDS	1	144	.	+	0	ID=cds-WP_000674541.1;Parent=gene-STY7866_RS16095;Dbxref=Genbank:WP_000674541.1;Name=WP_000674541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=STY7866_RS16095;partial=true;product=DUF1656 domain-containing protein;protein_id=WP_000674541.1;start_range=.,1;transl_table=11
NZ_CAAR01000432.1	RefSeq	gene	152	1084	.	+	.	ID=gene-STY7866_RS16100;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=STY7866_RS16100
NZ_CAAR01000432.1	Protein Homology	CDS	152	1084	.	+	0	ID=cds-WP_000855134.1;Parent=gene-STY7866_RS16100;Dbxref=Genbank:WP_000855134.1;Name=WP_000855134.1;gbkey=CDS;gene=aaeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457741.1;locus_tag=STY7866_RS16100;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000855134.1;transl_table=11
NZ_CAAR01000432.1	RefSeq	gene	1090	2354	.	+	.	ID=gene-STY7866_RS16105;Name=aaeB;end_range=2354,.;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=STY7866_RS16105;partial=true
NZ_CAAR01000432.1	Protein Homology	CDS	1090	2354	.	+	0	ID=cds-WP_000510907.1;Parent=gene-STY7866_RS16105;Dbxref=Genbank:WP_000510907.1;Name=WP_000510907.1;end_range=2354,.;gbkey=CDS;gene=aaeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457740.1;locus_tag=STY7866_RS16105;partial=true;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510907.1;transl_table=11
##sequence-region NZ_CAAR01000431.1 1 3423
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000431.1	RefSeq	region	1	3423	.	+	.	ID=NZ_CAAR01000431.1:1..3423;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000431.1	RefSeq	gene	1	495	.	-	.	ID=gene-STY7866_RS16070;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=STY7866_RS16070;partial=true;start_range=.,1
NZ_CAAR01000431.1	Protein Homology	CDS	1	495	.	-	0	ID=cds-WP_000384390.1;Parent=gene-STY7866_RS16070;Dbxref=Genbank:WP_000384390.1;Name=WP_000384390.1;gbkey=CDS;gene=hscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457071.1;locus_tag=STY7866_RS16070;partial=true;product=co-chaperone HscB;protein_id=WP_000384390.1;start_range=.,1;transl_table=11
NZ_CAAR01000431.1	RefSeq	gene	692	1015	.	-	.	ID=gene-STY7866_RS16075;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=STY7866_RS16075
NZ_CAAR01000431.1	Protein Homology	CDS	692	1015	.	-	0	ID=cds-WP_000028952.1;Parent=gene-STY7866_RS16075;Dbxref=Genbank:WP_000028952.1;Name=WP_000028952.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373466.1;locus_tag=STY7866_RS16075;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028952.1;transl_table=11
NZ_CAAR01000431.1	RefSeq	gene	1044	1430	.	-	.	ID=gene-STY7866_RS16080;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=STY7866_RS16080
NZ_CAAR01000431.1	Protein Homology	CDS	1044	1430	.	-	0	ID=cds-WP_000331704.1;Parent=gene-STY7866_RS16080;Dbxref=Genbank:WP_000331704.1;Name=WP_000331704.1;gbkey=CDS;gene=iscU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=STY7866_RS16080;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331704.1;transl_table=11
NZ_CAAR01000431.1	RefSeq	gene	1458	2672	.	-	.	ID=gene-STY7866_RS16085;Name=STY7866_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16085
NZ_CAAR01000431.1	Protein Homology	CDS	1458	2672	.	-	0	ID=cds-WP_000775270.1;Parent=gene-STY7866_RS16085;Dbxref=Genbank:WP_000775270.1;Name=WP_000775270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900428.1;locus_tag=STY7866_RS16085;product=cysteine desulfurase;protein_id=WP_000775270.1;transl_table=11
NZ_CAAR01000431.1	RefSeq	gene	2853	3347	.	-	.	ID=gene-STY7866_RS16090;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=STY7866_RS16090
NZ_CAAR01000431.1	Protein Homology	CDS	2853	3347	.	-	0	ID=cds-WP_001241346.1;Parent=gene-STY7866_RS16090;Dbxref=Genbank:WP_001241346.1;Name=WP_001241346.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=STY7866_RS16090;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241346.1;transl_table=11
##sequence-region NZ_CAAR01000430.1 1 6859
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000430.1	RefSeq	region	1	6859	.	+	.	ID=NZ_CAAR01000430.1:1..6859;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000430.1	RefSeq	gene	1	445	.	-	.	ID=gene-STY7866_RS16030;Name=STY7866_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16030;partial=true;start_range=.,1
NZ_CAAR01000430.1	Protein Homology	CDS	1	445	.	-	0	ID=cds-WP_024151084.1;Parent=gene-STY7866_RS16030;Dbxref=Genbank:WP_024151084.1;Name=WP_024151084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456919.1;locus_tag=STY7866_RS16030;partial=true;product=hypothetical protein;protein_id=WP_024151084.1;start_range=.,1;transl_table=11
NZ_CAAR01000430.1	RefSeq	gene	543	1757	.	-	.	ID=gene-STY7866_RS16035;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=STY7866_RS16035
NZ_CAAR01000430.1	Protein Homology	CDS	543	1757	.	-	0	ID=cds-WP_000817161.1;Parent=gene-STY7866_RS16035;Dbxref=Genbank:WP_000817161.1;Name=WP_000817161.1;gbkey=CDS;gene=fabB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456920.1;locus_tag=STY7866_RS16035;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817161.1;transl_table=11
NZ_CAAR01000430.1	RefSeq	gene	1857	3917	.	+	.	ID=gene-STY7866_RS16040;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=STY7866_RS16040
NZ_CAAR01000430.1	Protein Homology	CDS	1857	3917	.	+	0	ID=cds-WP_021013206.1;Parent=gene-STY7866_RS16040;Dbxref=Genbank:WP_021013206.1;Name=WP_021013206.1;gbkey=CDS;gene=mnmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456921.3;locus_tag=STY7866_RS16040;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_021013206.1;transl_table=11
NZ_CAAR01000430.1	RefSeq	gene	3969	4244	.	-	.	ID=gene-STY7866_RS16045;Name=STY7866_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16045
NZ_CAAR01000430.1	Protein Homology	CDS	3969	4244	.	-	0	ID=cds-WP_000559749.1;Parent=gene-STY7866_RS16045;Dbxref=Genbank:WP_000559749.1;Name=WP_000559749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456922.1;locus_tag=STY7866_RS16045;product=YfcL family protein;protein_id=WP_000559749.1;transl_table=11
NZ_CAAR01000430.1	RefSeq	pseudogene	4277	4826	.	-	.	ID=gene-STY7866_RS16050;Name=STY7866_RS16050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16050;pseudo=true
NZ_CAAR01000430.1	Protein Homology	CDS	4277	4826	.	-	0	ID=cds-STY7866_RS16050;Parent=gene-STY7866_RS16050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=STY7866_RS16050;product=elongation factor P hydroxylase;pseudo=true;transl_table=11
NZ_CAAR01000430.1	RefSeq	gene	4826	5635	.	-	.	ID=gene-STY7866_RS16055;Name=STY7866_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16055
NZ_CAAR01000430.1	Protein Homology	CDS	4826	5635	.	-	0	ID=cds-WP_000368599.1;Parent=gene-STY7866_RS16055;Dbxref=Genbank:WP_000368599.1;Name=WP_000368599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456923.1;locus_tag=STY7866_RS16055;product=TSUP family transporter;protein_id=WP_000368599.1;transl_table=11
NZ_CAAR01000430.1	RefSeq	gene	5635	6459	.	-	.	ID=gene-STY7866_RS16060;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=STY7866_RS16060
NZ_CAAR01000430.1	Protein Homology	CDS	5635	6459	.	-	0	ID=cds-WP_000750429.1;Parent=gene-STY7866_RS16060;Dbxref=Genbank:WP_000750429.1;Name=WP_000750429.1;gbkey=CDS;gene=mepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456924.1;locus_tag=STY7866_RS16060;product=penicillin-insensitive murein endopeptidase;protein_id=WP_000750429.1;transl_table=11
NZ_CAAR01000430.1	RefSeq	gene	6463	6859	.	-	.	ID=gene-STY7866_RS16065;Name=STY7866_RS16065;end_range=6859,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16065;partial=true
NZ_CAAR01000430.1	Protein Homology	CDS	6463	6859	.	-	1	ID=cds-WP_000518627.1;Parent=gene-STY7866_RS16065;Dbxref=Genbank:WP_000518627.1;Name=WP_000518627.1;end_range=6859,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=STY7866_RS16065;partial=true;product=chorismate synthase;protein_id=WP_000518627.1;transl_table=11
##sequence-region NZ_CAAR01000429.1 1 808
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000429.1	RefSeq	region	1	808	.	+	.	ID=NZ_CAAR01000429.1:1..808;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000429.1	RefSeq	gene	1	205	.	-	.	ID=gene-STY7866_RS16020;Name=STY7866_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16020;partial=true;start_range=.,1
NZ_CAAR01000429.1	Protein Homology	CDS	1	205	.	-	0	ID=cds-WP_000375829.1;Parent=gene-STY7866_RS16020;Dbxref=Genbank:WP_000375829.1;Name=WP_000375829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454897.1;locus_tag=STY7866_RS16020;partial=true;product=DcrB-related protein;protein_id=WP_000375829.1;start_range=.,1;transl_table=11
NZ_CAAR01000429.1	RefSeq	pseudogene	229	808	.	-	.	ID=gene-STY7866_RS16025;Name=STY7866_RS16025;end_range=808,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16025;partial=true;pseudo=true
NZ_CAAR01000429.1	Protein Homology	CDS	229	808	.	-	1	ID=cds-STY7866_RS16025;Parent=gene-STY7866_RS16025;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=808,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454896.1;locus_tag=STY7866_RS16025;partial=true;product=type VI secretion system tip protein VgrG;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000428.1 1 1786
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000428.1	RefSeq	region	1	1786	.	+	.	ID=NZ_CAAR01000428.1:1..1786;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000428.1	RefSeq	pseudogene	1	1786	.	-	.	ID=gene-STY7866_RS16015;Name=STY7866_RS16015;end_range=1786,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16015;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000428.1	Protein Homology	CDS	1	1786	.	-	2	ID=cds-STY7866_RS16015;Parent=gene-STY7866_RS16015;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;end_range=1786,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=STY7866_RS16015;partial=true;product=type III restriction-modification system endonuclease;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000427.1 1 7476
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000427.1	RefSeq	region	1	7476	.	+	.	ID=NZ_CAAR01000427.1:1..7476;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000427.1	RefSeq	pseudogene	1	566	.	-	.	ID=gene-STY7866_RS15960;Name=STY7866_RS15960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15960;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000427.1	Protein Homology	CDS	1	566	.	-	0	ID=cds-STY7866_RS15960;Parent=gene-STY7866_RS15960;Note=catalyzes the degradation of arginine to citruline and ammonia%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458884.1;locus_tag=STY7866_RS15960;partial=true;product=arginine deiminase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000427.1	RefSeq	gene	1241	1693	.	+	.	ID=gene-STY7866_RS15965;Name=STY7866_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15965
NZ_CAAR01000427.1	Protein Homology	CDS	1241	1693	.	+	0	ID=cds-WP_000635207.1;Parent=gene-STY7866_RS15965;Dbxref=Genbank:WP_000635207.1;Name=WP_000635207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458885.1;locus_tag=STY7866_RS15965;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000635207.1;transl_table=11
NZ_CAAR01000427.1	RefSeq	gene	1767	2771	.	-	.	ID=gene-STY7866_RS15970;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=STY7866_RS15970
NZ_CAAR01000427.1	Protein Homology	CDS	1767	2771	.	-	0	ID=cds-WP_000103040.1;Parent=gene-STY7866_RS15970;Dbxref=Genbank:WP_000103040.1;Name=WP_000103040.1;gbkey=CDS;gene=argF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458886.1;locus_tag=STY7866_RS15970;product=ornithine carbamoyltransferase;protein_id=WP_000103040.1;transl_table=11
NZ_CAAR01000427.1	RefSeq	gene	2937	3353	.	+	.	ID=gene-STY7866_RS15975;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=STY7866_RS15975
NZ_CAAR01000427.1	Protein Homology	CDS	2937	3353	.	+	0	ID=cds-WP_000002940.1;Parent=gene-STY7866_RS15975;Dbxref=Genbank:WP_000002940.1;Name=WP_000002940.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458887.1;locus_tag=STY7866_RS15975;product=ribonuclease E inhibitor RraB;protein_id=WP_000002940.1;transl_table=11
NZ_CAAR01000427.1	RefSeq	gene	3412	4176	.	+	.	ID=gene-STY7866_RS15980;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=STY7866_RS15980
NZ_CAAR01000427.1	Protein Homology	CDS	3412	4176	.	+	0	ID=cds-WP_001109009.1;Parent=gene-STY7866_RS15980;Dbxref=Genbank:WP_001109009.1;Name=WP_001109009.1;gbkey=CDS;gene=miaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458888.1;locus_tag=STY7866_RS15980;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_001109009.1;transl_table=11
NZ_CAAR01000427.1	RefSeq	pseudogene	4421	4911	.	-	.	ID=gene-STY7866_RS27540;Name=STY7866_RS27540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27540;pseudo=true
NZ_CAAR01000427.1	Protein Homology	CDS	4421	4911	.	-	0	ID=cds-STY7866_RS27540;Parent=gene-STY7866_RS27540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458890.1;locus_tag=STY7866_RS27540;product=DUF3617 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000427.1	RefSeq	gene	5018	5521	.	-	.	ID=gene-STY7866_RS16000;Name=STY7866_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16000
NZ_CAAR01000427.1	Protein Homology	CDS	5018	5521	.	-	0	ID=cds-WP_001681535.1;Parent=gene-STY7866_RS16000;Dbxref=Genbank:WP_001681535.1;Name=WP_001681535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=STY7866_RS16000;product=GNAT family N-acetyltransferase;protein_id=WP_001681535.1;transl_table=11
NZ_CAAR01000427.1	RefSeq	gene	5716	6903	.	+	.	ID=gene-STY7866_RS16005;Name=STY7866_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS16005
NZ_CAAR01000427.1	Protein Homology	CDS	5716	6903	.	+	0	ID=cds-WP_001066967.1;Parent=gene-STY7866_RS16005;Dbxref=Genbank:WP_001066967.1;Name=WP_001066967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458892.1;locus_tag=STY7866_RS16005;product=DUF898 domain-containing protein;protein_id=WP_001066967.1;transl_table=11
NZ_CAAR01000427.1	RefSeq	pseudogene	7045	7476	.	-	.	ID=gene-STY7866_RS16010;Name=STY7866_RS16010;end_range=7476,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS16010;partial=true;pseudo=true
NZ_CAAR01000427.1	Protein Homology	CDS	7045	7476	.	-	0	ID=cds-STY7866_RS16010;Parent=gene-STY7866_RS16010;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7476,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458893.1;locus_tag=STY7866_RS16010;partial=true;product=valine--tRNA ligase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000426.1 1 4618
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000426.1	RefSeq	region	1	4618	.	+	.	ID=NZ_CAAR01000426.1:1..4618;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000426.1	RefSeq	pseudogene	1	458	.	-	.	ID=gene-STY7866_RS15925;Name=STY7866_RS15925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15925;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000426.1	Protein Homology	CDS	1	458	.	-	0	ID=cds-STY7866_RS15925;Parent=gene-STY7866_RS15925;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458878.1;locus_tag=STY7866_RS15925;partial=true;product=aspartate carbamoyltransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000426.1	RefSeq	gene	461	514	.	-	.	ID=gene-STY7866_RS27530;Name=STY7866_RS27530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27530
NZ_CAAR01000426.1	Protein Homology	CDS	461	514	.	-	0	ID=cds-WP_106875647.1;Parent=gene-STY7866_RS27530;Dbxref=Genbank:WP_106875647.1;Name=WP_106875647.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08052.9;locus_tag=STY7866_RS27530;product=hypothetical protein;protein_id=WP_106875647.1;transl_table=11
NZ_CAAR01000426.1	RefSeq	gene	495	596	.	-	.	ID=gene-STY7866_RS15930;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=STY7866_RS15930
NZ_CAAR01000426.1	Protein Homology	CDS	495	596	.	-	0	ID=cds-WP_000249504.1;Parent=gene-STY7866_RS15930;Dbxref=Genbank:WP_000249504.1;Name=WP_000249504.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458879.1;locus_tag=STY7866_RS15930;product=pyr operon leader peptide;protein_id=WP_000249504.1;transl_table=11
NZ_CAAR01000426.1	RefSeq	pseudogene	576	717	.	+	.	ID=gene-STY7866_RS27535;Name=STY7866_RS27535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27535;pseudo=true
NZ_CAAR01000426.1	Protein Homology	CDS	576	717	.	+	0	ID=cds-STY7866_RS27535;Parent=gene-STY7866_RS27535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=STY7866_RS27535;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000426.1	RefSeq	gene	687	1175	.	-	.	ID=gene-STY7866_RS15935;Name=STY7866_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15935
NZ_CAAR01000426.1	Protein Homology	CDS	687	1175	.	-	0	ID=cds-WP_000666047.1;Parent=gene-STY7866_RS15935;Dbxref=Genbank:WP_000666047.1;Name=WP_000666047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458880.1;locus_tag=STY7866_RS15935;product=arginine repressor;protein_id=WP_000666047.1;transl_table=11
NZ_CAAR01000426.1	RefSeq	gene	1362	2765	.	-	.	ID=gene-STY7866_RS15945;Name=STY7866_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15945
NZ_CAAR01000426.1	Protein Homology	CDS	1362	2765	.	-	0	ID=cds-WP_000514432.1;Parent=gene-STY7866_RS15945;Dbxref=Genbank:WP_000514432.1;Name=WP_000514432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458881.1;locus_tag=STY7866_RS15945;product=YfcC family protein;protein_id=WP_000514432.1;transl_table=11
NZ_CAAR01000426.1	RefSeq	gene	2821	3825	.	-	.	ID=gene-STY7866_RS15950;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=STY7866_RS15950
NZ_CAAR01000426.1	Protein Homology	CDS	2821	3825	.	-	0	ID=cds-WP_000237033.1;Parent=gene-STY7866_RS15950;Dbxref=Genbank:WP_000237033.1;Name=WP_000237033.1;gbkey=CDS;gene=argF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458882.1;locus_tag=STY7866_RS15950;product=ornithine carbamoyltransferase;protein_id=WP_000237033.1;transl_table=11
NZ_CAAR01000426.1	RefSeq	gene	3937	4618	.	-	.	ID=gene-STY7866_RS15955;Name=STY7866_RS15955;end_range=4618,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15955;partial=true
NZ_CAAR01000426.1	Protein Homology	CDS	3937	4618	.	-	1	ID=cds-WP_000463459.1;Parent=gene-STY7866_RS15955;Dbxref=Genbank:WP_000463459.1;Name=WP_000463459.1;end_range=4618,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458883.1;locus_tag=STY7866_RS15955;partial=true;product=carbamate kinase;protein_id=WP_000463459.1;transl_table=11
##sequence-region NZ_CAAR01000425.1 1 5682
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000425.1	RefSeq	region	1	5682	.	+	.	ID=NZ_CAAR01000425.1:1..5682;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000425.1	RefSeq	pseudogene	1	104	.	+	.	ID=gene-STY7866_RS27525;Name=STY7866_RS27525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27525;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000425.1	Protein Homology	CDS	1	104	.	+	2	ID=cds-STY7866_RS27525;Parent=gene-STY7866_RS27525;Note=YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457801.1;locus_tag=STY7866_RS27525;partial=true;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000425.1	RefSeq	gene	240	2402	.	+	.	ID=gene-STY7866_RS15900;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=STY7866_RS15900
NZ_CAAR01000425.1	Protein Homology	CDS	240	2402	.	+	0	ID=cds-WP_000383444.1;Parent=gene-STY7866_RS15900;Dbxref=Genbank:WP_000383444.1;Name=WP_000383444.1;gbkey=CDS;gene=uvrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457800.1;locus_tag=STY7866_RS15900;product=DNA helicase II;protein_id=WP_000383444.1;transl_table=11
NZ_CAAR01000425.1	RefSeq	gene	2874	3824	.	+	.	ID=gene-STY7866_RS15905;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=STY7866_RS15905
NZ_CAAR01000425.1	Protein Homology	CDS	2874	3824	.	+	0	ID=cds-WP_000947139.1;Parent=gene-STY7866_RS15905;Dbxref=Genbank:WP_000947139.1;Name=WP_000947139.1;gbkey=CDS;gene=corA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=STY7866_RS15905;product=magnesium/cobalt transporter CorA;protein_id=WP_000947139.1;transl_table=11
NZ_CAAR01000425.1	RefSeq	gene	3873	4253	.	-	.	ID=gene-STY7866_RS15910;Name=STY7866_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15910
NZ_CAAR01000425.1	Protein Homology	CDS	3873	4253	.	-	0	ID=cds-WP_000356594.1;Parent=gene-STY7866_RS15910;Dbxref=Genbank:WP_000356594.1;Name=WP_000356594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457798.1;locus_tag=STY7866_RS15910;product=DUF2628 domain-containing protein;protein_id=WP_000356594.1;transl_table=11
NZ_CAAR01000425.1	RefSeq	gene	4269	4727	.	-	.	ID=gene-STY7866_RS15915;Name=STY7866_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15915
NZ_CAAR01000425.1	Protein Homology	CDS	4269	4727	.	-	0	ID=cds-WP_001738611.1;Parent=gene-STY7866_RS15915;Dbxref=Genbank:WP_001738611.1;Name=WP_001738611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457797.1;locus_tag=STY7866_RS15915;product=membrane protein;protein_id=WP_001738611.1;transl_table=11
NZ_CAAR01000425.1	RefSeq	gene	4762	5646	.	-	.	ID=gene-STY7866_RS15920;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=STY7866_RS15920
NZ_CAAR01000425.1	Protein Homology	CDS	4762	5646	.	-	0	ID=cds-WP_000339085.1;Parent=gene-STY7866_RS15920;Dbxref=Genbank:WP_000339085.1;Name=WP_000339085.1;gbkey=CDS;gene=rarD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457796.1;locus_tag=STY7866_RS15920;product=EamA family transporter RarD;protein_id=WP_000339085.1;transl_table=11
##sequence-region NZ_CAAR01000424.1 1 4656
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000424.1	RefSeq	region	1	4656	.	+	.	ID=NZ_CAAR01000424.1:1..4656;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000424.1	RefSeq	pseudogene	108	275	.	+	.	ID=gene-STY7866_RS15860;Name=STY7866_RS15860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15860;pseudo=true
NZ_CAAR01000424.1	Protein Homology	CDS	108	275	.	+	0	ID=cds-STY7866_RS15860;Parent=gene-STY7866_RS15860;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356323.1;locus_tag=STY7866_RS15860;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11
NZ_CAAR01000424.1	RefSeq	gene	722	1552	.	-	.	ID=gene-STY7866_RS15870;Name=STY7866_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15870
NZ_CAAR01000424.1	Protein Homology	CDS	722	1552	.	-	0	ID=cds-WP_010989225.1;Parent=gene-STY7866_RS15870;Dbxref=Genbank:WP_010989225.1;Name=WP_010989225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505598.1;locus_tag=STY7866_RS15870;product=hypothetical protein;protein_id=WP_010989225.1;transl_table=11
NZ_CAAR01000424.1	RefSeq	gene	2147	3265	.	-	.	ID=gene-STY7866_RS15875;Name=STY7866_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15875
NZ_CAAR01000424.1	Protein Homology	CDS	2147	3265	.	-	0	ID=cds-WP_000403444.1;Parent=gene-STY7866_RS15875;Dbxref=Genbank:WP_000403444.1;Name=WP_000403444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457349.1;locus_tag=STY7866_RS15875;product=hypothetical protein;protein_id=WP_000403444.1;transl_table=11
NZ_CAAR01000424.1	RefSeq	gene	3324	3860	.	-	.	ID=gene-STY7866_RS15880;Name=STY7866_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15880
NZ_CAAR01000424.1	Protein Homology	CDS	3324	3860	.	-	0	ID=cds-WP_001079652.1;Parent=gene-STY7866_RS15880;Dbxref=Genbank:WP_001079652.1;Name=WP_001079652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457348.1;locus_tag=STY7866_RS15880;product=fimbrial protein;protein_id=WP_001079652.1;transl_table=11
NZ_CAAR01000424.1	RefSeq	gene	3857	4327	.	-	.	ID=gene-STY7866_RS15885;Name=STY7866_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15885
NZ_CAAR01000424.1	Protein Homology	CDS	3857	4327	.	-	0	ID=cds-WP_000832400.1;Parent=gene-STY7866_RS15885;Dbxref=Genbank:WP_000832400.1;Name=WP_000832400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457347.1;locus_tag=STY7866_RS15885;product=fimbrial protein;protein_id=WP_000832400.1;transl_table=11
NZ_CAAR01000424.1	RefSeq	gene	4342	4656	.	-	.	ID=gene-STY7866_RS15890;Name=STY7866_RS15890;end_range=4656,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15890;partial=true
NZ_CAAR01000424.1	Protein Homology	CDS	4342	4656	.	-	0	ID=cds-WP_000303899.1;Parent=gene-STY7866_RS15890;Dbxref=Genbank:WP_000303899.1;Name=WP_000303899.1;end_range=4656,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457346.1;locus_tag=STY7866_RS15890;partial=true;product=fimbrial protein;protein_id=WP_000303899.1;transl_table=11
##sequence-region NZ_CAAR01000423.1 1 2837
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000423.1	RefSeq	region	1	2837	.	+	.	ID=NZ_CAAR01000423.1:1..2837;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000423.1	RefSeq	pseudogene	1	179	.	+	.	ID=gene-STY7866_RS15835;Name=STY7866_RS15835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15835;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000423.1	Protein Homology	CDS	1	179	.	+	2	ID=cds-STY7866_RS15835;Parent=gene-STY7866_RS15835;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458026.1;locus_tag=STY7866_RS15835;partial=true;product=DeoR family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000423.1	RefSeq	gene	370	969	.	+	.	ID=gene-STY7866_RS15840;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=STY7866_RS15840
NZ_CAAR01000423.1	Protein Homology	CDS	370	969	.	+	0	ID=cds-WP_000965695.1;Parent=gene-STY7866_RS15840;Dbxref=Genbank:WP_000965695.1;Name=WP_000965695.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458025.1;locus_tag=STY7866_RS15840;product=glucose-1-phosphatase;protein_id=WP_000965695.1;transl_table=11
NZ_CAAR01000423.1	RefSeq	gene	963	1835	.	+	.	ID=gene-STY7866_RS15845;Name=STY7866_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15845
NZ_CAAR01000423.1	Protein Homology	CDS	963	1835	.	+	0	ID=cds-WP_000921423.1;Parent=gene-STY7866_RS15845;Dbxref=Genbank:WP_000921423.1;Name=WP_000921423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458024.1;locus_tag=STY7866_RS15845;product=virulence factor BrkB family protein;protein_id=WP_000921423.1;transl_table=11
NZ_CAAR01000423.1	RefSeq	gene	1832	2269	.	+	.	ID=gene-STY7866_RS15850;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=STY7866_RS15850
NZ_CAAR01000423.1	Protein Homology	CDS	1832	2269	.	+	0	ID=cds-WP_000560975.1;Parent=gene-STY7866_RS15850;Dbxref=Genbank:WP_000560975.1;Name=WP_000560975.1;gbkey=CDS;gene=dtd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=STY7866_RS15850;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=WP_000560975.1;transl_table=11
NZ_CAAR01000423.1	RefSeq	gene	2266	2837	.	+	.	ID=gene-STY7866_RS15855;Name=STY7866_RS15855;end_range=2837,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15855;partial=true
NZ_CAAR01000423.1	Protein Homology	CDS	2266	2837	.	+	0	ID=cds-WP_151260008.1;Parent=gene-STY7866_RS15855;Dbxref=Genbank:WP_151260008.1;Name=WP_151260008.1;end_range=2837,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458022.1;locus_tag=STY7866_RS15855;partial=true;product=fatty acid biosynthesis protein FabY;protein_id=WP_151260008.1;transl_table=11
##sequence-region NZ_CAAR01000422.1 1 727
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000422.1	RefSeq	region	1	727	.	+	.	ID=NZ_CAAR01000422.1:1..727;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000422.1	RefSeq	pseudogene	136	727	.	-	.	ID=gene-STY7866_RS15830;Name=STY7866_RS15830;end_range=727,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15830;partial=true;pseudo=true
NZ_CAAR01000422.1	Protein Homology	CDS	136	727	.	-	1	ID=cds-STY7866_RS15830;Parent=gene-STY7866_RS15830;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=727,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456882.1;locus_tag=STY7866_RS15830;partial=true;product=alpha-ketoacid dehydrogenase subunit beta;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000421.1 1 597
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000421.1	RefSeq	region	1	597	.	+	.	ID=NZ_CAAR01000421.1:1..597;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000421.1	RefSeq	gene	1	445	.	-	.	ID=gene-STY7866_RS15820;Name=STY7866_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15820;partial=true;start_range=.,1
NZ_CAAR01000421.1	Protein Homology	CDS	1	445	.	-	0	ID=cds-WP_024151083.1;Parent=gene-STY7866_RS15820;Dbxref=Genbank:WP_024151083.1;Name=WP_024151083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458230.1;locus_tag=STY7866_RS15820;partial=true;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_024151083.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000420.1 1 2360
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000420.1	RefSeq	region	1	2360	.	+	.	ID=NZ_CAAR01000420.1:1..2360;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000420.1	RefSeq	gene	1	1039	.	+	.	ID=gene-STY7866_RS15805;Name=STY7866_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15805;partial=true;start_range=.,1
NZ_CAAR01000420.1	Protein Homology	CDS	1	1039	.	+	1	ID=cds-WP_000441263.1;Parent=gene-STY7866_RS15805;Dbxref=Genbank:WP_000441263.1;Name=WP_000441263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455059.1;locus_tag=STY7866_RS15805;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_000441263.1;start_range=.,1;transl_table=11
NZ_CAAR01000420.1	RefSeq	gene	1252	1590	.	+	.	ID=gene-STY7866_RS15810;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=STY7866_RS15810
NZ_CAAR01000420.1	Protein Homology	CDS	1252	1590	.	+	0	ID=cds-WP_000780341.1;Parent=gene-STY7866_RS15810;Dbxref=Genbank:WP_000780341.1;Name=WP_000780341.1;gbkey=CDS;gene=glnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455060.1;locus_tag=STY7866_RS15810;product=P-II family nitrogen regulator;protein_id=WP_000780341.1;transl_table=11
NZ_CAAR01000420.1	RefSeq	pseudogene	1622	2360	.	+	.	ID=gene-STY7866_RS15815;Name=STY7866_RS15815;end_range=2360,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15815;partial=true;pseudo=true
NZ_CAAR01000420.1	Protein Homology	CDS	1622	2360	.	+	0	ID=cds-STY7866_RS15815;Parent=gene-STY7866_RS15815;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2360,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455061.1;locus_tag=STY7866_RS15815;partial=true;product=ammonium transporter;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000419.1 1 1412
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000419.1	RefSeq	region	1	1412	.	+	.	ID=NZ_CAAR01000419.1:1..1412;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000419.1	RefSeq	gene	1	210	.	+	.	ID=gene-STY7866_RS26450;Name=STY7866_RS26450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26450;partial=true;start_range=.,1
NZ_CAAR01000419.1	Protein Homology	CDS	1	210	.	+	0	ID=cds-WP_000302458.1;Parent=gene-STY7866_RS26450;Dbxref=Genbank:WP_000302458.1;Name=WP_000302458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001691282.1;locus_tag=STY7866_RS26450;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000302458.1;start_range=.,1;transl_table=11
NZ_CAAR01000419.1	RefSeq	gene	372	1412	.	-	.	ID=gene-STY7866_RS15800;Name=xseA;end_range=1412,.;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=STY7866_RS15800;partial=true
NZ_CAAR01000419.1	Protein Homology	CDS	372	1412	.	-	0	ID=cds-WP_000295884.1;Parent=gene-STY7866_RS15800;Dbxref=Genbank:WP_000295884.1;Name=WP_000295884.1;end_range=1412,.;gbkey=CDS;gene=xseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457046.1;locus_tag=STY7866_RS15800;partial=true;product=exodeoxyribonuclease VII large subunit;protein_id=WP_000295884.1;transl_table=11
##sequence-region NZ_CAAR01000418.1 1 12751
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000418.1	RefSeq	region	1	12751	.	+	.	ID=NZ_CAAR01000418.1:1..12751;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000418.1	RefSeq	gene	18	476	.	-	.	ID=gene-STY7866_RS15735;Name=STY7866_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15735
NZ_CAAR01000418.1	Protein Homology	CDS	18	476	.	-	0	ID=cds-WP_000488291.1;Parent=gene-STY7866_RS15735;Dbxref=Genbank:WP_000488291.1;Name=WP_000488291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454731.1;locus_tag=STY7866_RS15735;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_000488291.1;transl_table=11
NZ_CAAR01000418.1	RefSeq	gene	1082	2086	.	-	.	ID=gene-STY7866_RS15740;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=STY7866_RS15740
NZ_CAAR01000418.1	Protein Homology	CDS	1082	2086	.	-	0	ID=cds-WP_000762406.1;Parent=gene-STY7866_RS15740;Dbxref=Genbank:WP_000762406.1;Name=WP_000762406.1;gbkey=CDS;gene=cra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454730.1;locus_tag=STY7866_RS15740;product=catabolite repressor/activator;protein_id=WP_000762406.1;transl_table=11
NZ_CAAR01000418.1	RefSeq	gene	2370	2861	.	-	.	ID=gene-STY7866_RS15745;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=STY7866_RS15745
NZ_CAAR01000418.1	Protein Homology	CDS	2370	2861	.	-	0	ID=cds-WP_001750262.1;Parent=gene-STY7866_RS15745;Dbxref=Genbank:WP_001750262.1;Name=WP_001750262.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=STY7866_RS15745;product=acetolactate synthase small subunit;protein_id=WP_001750262.1;transl_table=11
NZ_CAAR01000418.1	RefSeq	pseudogene	2864	4566	.	-	.	ID=gene-STY7866_RS15750;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=pseudogene;locus_tag=STY7866_RS15750;pseudo=true
NZ_CAAR01000418.1	Protein Homology	CDS	2864	4566	.	-	0	ID=cds-STY7866_RS15750;Parent=gene-STY7866_RS15750;Note=frameshifted;gbkey=CDS;gene=ilvI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001804085.1;locus_tag=STY7866_RS15750;product=acetolactate synthase 3 large subunit;pseudo=true;transl_table=11
NZ_CAAR01000418.1	RefSeq	gene	4912	5856	.	-	.	ID=gene-STY7866_RS15755;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=STY7866_RS15755
NZ_CAAR01000418.1	Protein Homology	CDS	4912	5856	.	-	0	ID=cds-WP_001115425.1;Parent=gene-STY7866_RS15755;Dbxref=Genbank:WP_001115425.1;Name=WP_001115425.1;gbkey=CDS;gene=leuO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454727.1;locus_tag=STY7866_RS15755;product=transcriptional regulator LeuO;protein_id=WP_001115425.1;transl_table=11
NZ_CAAR01000418.1	RefSeq	gene	6513	6599	.	+	.	ID=gene-STY7866_RS15760;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=STY7866_RS15760
NZ_CAAR01000418.1	Protein Homology	CDS	6513	6599	.	+	0	ID=cds-WP_001762463.1;Parent=gene-STY7866_RS15760;Dbxref=Genbank:WP_001762463.1;Name=WP_001762463.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454726.1;locus_tag=STY7866_RS15760;product=leu operon leader peptide;protein_id=WP_001762463.1;transl_table=11
NZ_CAAR01000418.1	RefSeq	pseudogene	6687	8259	.	+	.	ID=gene-STY7866_RS15765;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=pseudogene;locus_tag=STY7866_RS15765;pseudo=true
NZ_CAAR01000418.1	Protein Homology	CDS	6687	8259	.	+	0	ID=cds-STY7866_RS15765;Parent=gene-STY7866_RS15765;Note=frameshifted;gbkey=CDS;gene=leuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=STY7866_RS15765;product=2-isopropylmalate synthase;pseudo=true;transl_table=11
NZ_CAAR01000418.1	RefSeq	pseudogene	8259	9352	.	+	.	ID=gene-STY7866_RS15770;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=pseudogene;locus_tag=STY7866_RS15770;pseudo=true
NZ_CAAR01000418.1	Protein Homology	CDS	8259	9352	.	+	0	ID=cds-STY7866_RS15770;Parent=gene-STY7866_RS15770;Note=frameshifted;gbkey=CDS;gene=leuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=STY7866_RS15770;product=3-isopropylmalate dehydrogenase;pseudo=true;transl_table=11
NZ_CAAR01000418.1	RefSeq	gene	9355	10755	.	+	.	ID=gene-STY7866_RS15775;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=STY7866_RS15775
NZ_CAAR01000418.1	Protein Homology	CDS	9355	10755	.	+	0	ID=cds-WP_001140632.1;Parent=gene-STY7866_RS15775;Dbxref=Genbank:WP_001140632.1;Name=WP_001140632.1;gbkey=CDS;gene=leuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454723.1;locus_tag=STY7866_RS15775;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140632.1;transl_table=11
NZ_CAAR01000418.1	RefSeq	gene	10766	11371	.	+	.	ID=gene-STY7866_RS15780;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=STY7866_RS15780
NZ_CAAR01000418.1	Protein Homology	CDS	10766	11371	.	+	0	ID=cds-WP_000818262.1;Parent=gene-STY7866_RS15780;Dbxref=Genbank:WP_000818262.1;Name=WP_000818262.1;gbkey=CDS;gene=leuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454722.1;locus_tag=STY7866_RS15780;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818262.1;transl_table=11
NZ_CAAR01000418.1	RefSeq	gene	11706	11828	.	-	.	ID=gene-STY7866_RS15785;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=STY7866_RS15785
NZ_CAAR01000418.1	Protein Homology	CDS	11706	11828	.	-	0	ID=cds-WP_001248755.1;Parent=gene-STY7866_RS15785;Dbxref=Genbank:WP_001248755.1;Name=WP_001248755.1;gbkey=CDS;gene=sgrT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=STY7866_RS15785;product=glucose uptake inhibitor SgrT;protein_id=WP_001248755.1;transl_table=11
NZ_CAAR01000418.1	RefSeq	gene	11921	12751	.	+	.	ID=gene-STY7866_RS15790;Name=sgrR;end_range=12751,.;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=STY7866_RS15790;partial=true
NZ_CAAR01000418.1	Protein Homology	CDS	11921	12751	.	+	0	ID=cds-WP_001139024.1;Parent=gene-STY7866_RS15790;Dbxref=Genbank:WP_001139024.1;Name=WP_001139024.1;end_range=12751,.;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454721.1;locus_tag=STY7866_RS15790;partial=true;product=HTH-type transcriptional regulator SgrR;protein_id=WP_001139024.1;transl_table=11
##sequence-region NZ_CAAR01000417.1 1 2484
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000417.1	RefSeq	region	1	2484	.	+	.	ID=NZ_CAAR01000417.1:1..2484;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000417.1	RefSeq	gene	161	1690	.	+	.	ID=gene-STY7866_RS15725;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=STY7866_RS15725
NZ_CAAR01000417.1	Protein Homology	CDS	161	1690	.	+	0	ID=cds-WP_001219360.1;Parent=gene-STY7866_RS15725;Dbxref=Genbank:WP_001219360.1;Name=WP_001219360.1;gbkey=CDS;gene=pntA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456001.1;locus_tag=STY7866_RS15725;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001219360.1;transl_table=11
NZ_CAAR01000417.1	RefSeq	pseudogene	1701	2484	.	+	.	ID=gene-STY7866_RS15730;Name=pntB;end_range=2484,.;gbkey=Gene;gene=pntB;gene_biotype=pseudogene;locus_tag=STY7866_RS15730;partial=true;pseudo=true
NZ_CAAR01000417.1	Protein Homology	CDS	1701	2484	.	+	0	ID=cds-STY7866_RS15730;Parent=gene-STY7866_RS15730;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2484,.;gbkey=CDS;gene=pntB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=STY7866_RS15730;partial=true;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000416.1 1 3763
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000416.1	RefSeq	region	1	3763	.	+	.	ID=NZ_CAAR01000416.1:1..3763;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000416.1	RefSeq	gene	1	1351	.	-	.	ID=gene-STY7866_RS15700;Name=STY7866_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15700;partial=true;start_range=.,1
NZ_CAAR01000416.1	Protein Homology	CDS	1	1351	.	-	0	ID=cds-WP_000627965.1;Parent=gene-STY7866_RS15700;Dbxref=Genbank:WP_000627965.1;Name=WP_000627965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077585.1;locus_tag=STY7866_RS15700;partial=true;product=LOG family protein;protein_id=WP_000627965.1;start_range=.,1;transl_table=11
NZ_CAAR01000416.1	RefSeq	gene	1465	2313	.	-	.	ID=gene-STY7866_RS15705;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=STY7866_RS15705
NZ_CAAR01000416.1	Protein Homology	CDS	1465	2313	.	-	0	ID=cds-WP_000100463.1;Parent=gene-STY7866_RS15705;Dbxref=Genbank:WP_000100463.1;Name=WP_000100463.1;gbkey=CDS;gene=queF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457363.1;locus_tag=STY7866_RS15705;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_000100463.1;transl_table=11
NZ_CAAR01000416.1	RefSeq	gene	2382	2927	.	+	.	ID=gene-STY7866_RS15710;Name=STY7866_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15710
NZ_CAAR01000416.1	Protein Homology	CDS	2382	2927	.	+	0	ID=cds-WP_000343990.1;Parent=gene-STY7866_RS15710;Dbxref=Genbank:WP_000343990.1;Name=WP_000343990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457362.1;locus_tag=STY7866_RS15710;product=SecY-interacting protein;protein_id=WP_000343990.1;transl_table=11
NZ_CAAR01000416.1	RefSeq	gene	3171	3383	.	+	.	ID=gene-STY7866_RS15715;Name=STY7866_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15715
NZ_CAAR01000416.1	Protein Homology	CDS	3171	3383	.	+	0	ID=cds-WP_000988721.1;Parent=gene-STY7866_RS15715;Dbxref=Genbank:WP_000988721.1;Name=WP_000988721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988723.1;locus_tag=STY7866_RS15715;product=hypothetical protein;protein_id=WP_000988721.1;transl_table=11
NZ_CAAR01000416.1	RefSeq	gene	3537	3763	.	+	.	ID=gene-STY7866_RS15720;Name=STY7866_RS15720;end_range=3763,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15720;partial=true
NZ_CAAR01000416.1	Protein Homology	CDS	3537	3763	.	+	0	ID=cds-WP_001764524.1;Parent=gene-STY7866_RS15720;Dbxref=Genbank:WP_001764524.1;Name=WP_001764524.1;end_range=3763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457361.1;locus_tag=STY7866_RS15720;partial=true;product=hypothetical protein;protein_id=WP_001764524.1;transl_table=11
##sequence-region NZ_CAAR01000415.1 1 9316
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000415.1	RefSeq	region	1	9316	.	+	.	ID=NZ_CAAR01000415.1:1..9316;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000415.1	RefSeq	pseudogene	1	70	.	+	.	ID=gene-STY7866_RS27520;Name=STY7866_RS27520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27520;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000415.1	Protein Homology	CDS	1	70	.	+	1	ID=cds-STY7866_RS27520;Parent=gene-STY7866_RS27520;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455955.1;locus_tag=STY7866_RS27520;partial=true;product=DUF4186 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000415.1	RefSeq	gene	292	1239	.	+	.	ID=gene-STY7866_RS15645;Name=STY7866_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15645
NZ_CAAR01000415.1	Protein Homology	CDS	292	1239	.	+	0	ID=cds-WP_000217082.1;Parent=gene-STY7866_RS15645;Dbxref=Genbank:WP_000217082.1;Name=WP_000217082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455954.1;locus_tag=STY7866_RS15645;product=hypothetical protein;protein_id=WP_000217082.1;transl_table=11
NZ_CAAR01000415.1	RefSeq	gene	1295	1837	.	-	.	ID=gene-STY7866_RS15650;Name=STY7866_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15650
NZ_CAAR01000415.1	Protein Homology	CDS	1295	1837	.	-	0	ID=cds-WP_000513114.1;Parent=gene-STY7866_RS15650;Dbxref=Genbank:WP_000513114.1;Name=WP_000513114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455953.1;locus_tag=STY7866_RS15650;product=nuclear transport factor 2 family protein;protein_id=WP_000513114.1;transl_table=11
NZ_CAAR01000415.1	RefSeq	pseudogene	2555	2971	.	+	.	ID=gene-STY7866_RS15655;Name=STY7866_RS15655;end_range=2971,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15655;partial=true;pseudo=true
NZ_CAAR01000415.1	Protein Homology	CDS	2555	2971	.	+	0	ID=cds-STY7866_RS15655;Parent=gene-STY7866_RS15655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2971,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=STY7866_RS15655;partial=true;product=porin;pseudo=true;transl_table=11
NZ_CAAR01000415.1	RefSeq	gene	2939	3709	.	-	.	ID=gene-STY7866_RS15660;Name=STY7866_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15660
NZ_CAAR01000415.1	Protein Homology	CDS	2939	3709	.	-	0	ID=cds-WP_001189412.1;Parent=gene-STY7866_RS15660;Dbxref=Genbank:WP_001189412.1;Name=WP_001189412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455952.1;locus_tag=STY7866_RS15660;product=ATP/GTP-binding protein;protein_id=WP_001189412.1;transl_table=11
NZ_CAAR01000415.1	RefSeq	gene	3697	4758	.	-	.	ID=gene-STY7866_RS15665;Name=STY7866_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15665
NZ_CAAR01000415.1	Protein Homology	CDS	3697	4758	.	-	0	ID=cds-WP_001016747.1;Parent=gene-STY7866_RS15665;Dbxref=Genbank:WP_001016747.1;Name=WP_001016747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455951.1;locus_tag=STY7866_RS15665;product=hydrogenase-1 operon protein HyaF2;protein_id=WP_001016747.1;transl_table=11
NZ_CAAR01000415.1	RefSeq	gene	4776	5186	.	-	.	ID=gene-STY7866_RS15670;Name=STY7866_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15670
NZ_CAAR01000415.1	Protein Homology	CDS	4776	5186	.	-	0	ID=cds-WP_000155978.1;Parent=gene-STY7866_RS15670;Dbxref=Genbank:WP_000155978.1;Name=WP_000155978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455950.1;locus_tag=STY7866_RS15670;product=hydrogenase;protein_id=WP_000155978.1;transl_table=11
NZ_CAAR01000415.1	RefSeq	gene	5183	5482	.	-	.	ID=gene-STY7866_RS15675;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=STY7866_RS15675
NZ_CAAR01000415.1	Protein Homology	CDS	5183	5482	.	-	0	ID=cds-WP_000334908.1;Parent=gene-STY7866_RS15675;Dbxref=Genbank:WP_000334908.1;Name=WP_000334908.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455949.1;locus_tag=STY7866_RS15675;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_000334908.1;transl_table=11
NZ_CAAR01000415.1	RefSeq	gene	5482	6090	.	-	.	ID=gene-STY7866_RS15680;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=STY7866_RS15680
NZ_CAAR01000415.1	Protein Homology	CDS	5482	6090	.	-	0	ID=cds-WP_000852667.1;Parent=gene-STY7866_RS15680;Dbxref=Genbank:WP_000852667.1;Name=WP_000852667.1;gbkey=CDS;gene=hybD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455948.1;locus_tag=STY7866_RS15680;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_000852667.1;transl_table=11
NZ_CAAR01000415.1	RefSeq	gene	6096	6839	.	-	.	ID=gene-STY7866_RS15685;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=STY7866_RS15685
NZ_CAAR01000415.1	Protein Homology	CDS	6096	6839	.	-	0	ID=cds-WP_000924456.1;Parent=gene-STY7866_RS15685;Dbxref=Genbank:WP_000924456.1;Name=WP_000924456.1;gbkey=CDS;gene=cybH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=STY7866_RS15685;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_000924456.1;transl_table=11
NZ_CAAR01000415.1	RefSeq	pseudogene	6790	8592	.	-	.	ID=gene-STY7866_RS15690;Name=STY7866_RS15690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15690;pseudo=true
NZ_CAAR01000415.1	Protein Homology	CDS	6790	8592	.	-	0	ID=cds-STY7866_RS15690;Parent=gene-STY7866_RS15690;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=STY7866_RS15690;product=nickel-dependent hydrogenase large subunit;pseudo=true;transl_table=11
NZ_CAAR01000415.1	RefSeq	gene	8595	9316	.	-	.	ID=gene-STY7866_RS15695;Name=STY7866_RS15695;end_range=9316,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15695;partial=true
NZ_CAAR01000415.1	Protein Homology	CDS	8595	9316	.	-	2	ID=cds-WP_001764508.1;Parent=gene-STY7866_RS15695;Dbxref=Genbank:WP_001764508.1;Name=WP_001764508.1;end_range=9316,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455946.1;locus_tag=STY7866_RS15695;partial=true;product=hydrogenase small subunit;protein_id=WP_001764508.1;transl_table=11
##sequence-region NZ_CAAR01000414.1 1 9378
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000414.1	RefSeq	region	1	9378	.	+	.	ID=NZ_CAAR01000414.1:1..9378;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000414.1	RefSeq	gene	1	190	.	-	.	ID=gene-STY7866_RS15585;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=STY7866_RS15585;partial=true;start_range=.,1
NZ_CAAR01000414.1	Protein Homology	CDS	1	190	.	-	0	ID=cds-WP_001161669.1;Parent=gene-STY7866_RS15585;Dbxref=Genbank:WP_001161669.1;Name=WP_001161669.1;gbkey=CDS;gene=rsfS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455218.1;locus_tag=STY7866_RS15585;partial=true;product=ribosome silencing factor;protein_id=WP_001161669.1;start_range=.,1;transl_table=11
NZ_CAAR01000414.1	RefSeq	gene	519	1127	.	-	.	ID=gene-STY7866_RS15595;Name=STY7866_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15595
NZ_CAAR01000414.1	Protein Homology	CDS	519	1127	.	-	0	ID=cds-WP_001241919.1;Parent=gene-STY7866_RS15595;Dbxref=Genbank:WP_001241919.1;Name=WP_001241919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455219.1;locus_tag=STY7866_RS15595;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001241919.1;transl_table=11
NZ_CAAR01000414.1	RefSeq	gene	1224	2318	.	+	.	ID=gene-STY7866_RS15600;Name=STY7866_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15600
NZ_CAAR01000414.1	Protein Homology	CDS	1224	2318	.	+	0	ID=cds-WP_001173241.1;Parent=gene-STY7866_RS15600;Dbxref=Genbank:WP_001173241.1;Name=WP_001173241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455220.1;locus_tag=STY7866_RS15600;product=threonine-phosphate decarboxylase;protein_id=WP_001173241.1;transl_table=11
NZ_CAAR01000414.1	RefSeq	gene	2293	2934	.	-	.	ID=gene-STY7866_RS15605;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=STY7866_RS15605
NZ_CAAR01000414.1	Protein Homology	CDS	2293	2934	.	-	0	ID=cds-WP_010989126.1;Parent=gene-STY7866_RS15605;Dbxref=Genbank:WP_010989126.1;Name=WP_010989126.1;gbkey=CDS;gene=nadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455221.1;locus_tag=STY7866_RS15605;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_010989126.1;transl_table=11
NZ_CAAR01000414.1	RefSeq	gene	2936	3967	.	-	.	ID=gene-STY7866_RS15610;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=STY7866_RS15610
NZ_CAAR01000414.1	Protein Homology	CDS	2936	3967	.	-	0	ID=cds-WP_000620491.1;Parent=gene-STY7866_RS15610;Dbxref=Genbank:WP_000620491.1;Name=WP_000620491.1;gbkey=CDS;gene=holA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455222.1;locus_tag=STY7866_RS15610;product=DNA polymerase III subunit delta;protein_id=WP_000620491.1;transl_table=11
NZ_CAAR01000414.1	RefSeq	gene	3967	4557	.	-	.	ID=gene-STY7866_RS15615;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=STY7866_RS15615
NZ_CAAR01000414.1	Protein Homology	CDS	3967	4557	.	-	0	ID=cds-WP_001269949.1;Parent=gene-STY7866_RS15615;Dbxref=Genbank:WP_001269949.1;Name=WP_001269949.1;gbkey=CDS;gene=lptE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455223.1;locus_tag=STY7866_RS15615;product=LPS assembly lipoprotein LptE;protein_id=WP_001269949.1;transl_table=11
NZ_CAAR01000414.1	RefSeq	gene	4572	7154	.	-	.	ID=gene-STY7866_RS15620;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=STY7866_RS15620
NZ_CAAR01000414.1	Protein Homology	CDS	4572	7154	.	-	0	ID=cds-WP_001157907.1;Parent=gene-STY7866_RS15620;Dbxref=Genbank:WP_001157907.1;Name=WP_001157907.1;gbkey=CDS;gene=leuS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=STY7866_RS15620;product=leucine--tRNA ligase;protein_id=WP_001157907.1;transl_table=11
NZ_CAAR01000414.1	RefSeq	gene	7391	7732	.	+	.	ID=gene-STY7866_RS15625;Name=STY7866_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15625
NZ_CAAR01000414.1	Protein Homology	CDS	7391	7732	.	+	0	ID=cds-WP_001574029.1;Parent=gene-STY7866_RS15625;Dbxref=Genbank:WP_001574029.1;Name=WP_001574029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=STY7866_RS15625;product=UxaA family hydrolase;protein_id=WP_001574029.1;transl_table=11
NZ_CAAR01000414.1	RefSeq	gene	7749	8921	.	+	.	ID=gene-STY7866_RS15630;Name=STY7866_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15630
NZ_CAAR01000414.1	Protein Homology	CDS	7749	8921	.	+	0	ID=cds-WP_001775656.1;Parent=gene-STY7866_RS15630;Dbxref=Genbank:WP_001775656.1;Name=WP_001775656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=STY7866_RS15630;product=UxaA family hydrolase;protein_id=WP_001775656.1;transl_table=11
NZ_CAAR01000414.1	RefSeq	pseudogene	8971	9378	.	+	.	ID=gene-STY7866_RS15635;Name=STY7866_RS15635;end_range=9378,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15635;partial=true;pseudo=true
NZ_CAAR01000414.1	Protein Homology	CDS	8971	9378	.	+	0	ID=cds-STY7866_RS15635;Parent=gene-STY7866_RS15635;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=9378,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455227.1;locus_tag=STY7866_RS15635;partial=true;product=2-keto-3-deoxygluconate permease 2;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000413.1 1 6538
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000413.1	RefSeq	region	1	6538	.	+	.	ID=NZ_CAAR01000413.1:1..6538;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000413.1	RefSeq	pseudogene	1	1291	.	-	.	ID=gene-STY7866_RS15545;Name=pat;gbkey=Gene;gene=pat;gene_biotype=pseudogene;locus_tag=STY7866_RS15545;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000413.1	Protein Homology	CDS	1	1291	.	-	0	ID=cds-STY7866_RS15545;Parent=gene-STY7866_RS15545;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457126.1;locus_tag=STY7866_RS15545;partial=true;product=protein lysine acetyltransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000413.1	RefSeq	gene	1345	2025	.	-	.	ID=gene-STY7866_RS15550;Name=STY7866_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15550
NZ_CAAR01000413.1	Protein Homology	CDS	1345	2025	.	-	0	ID=cds-WP_000183640.1;Parent=gene-STY7866_RS15550;Dbxref=Genbank:WP_000183640.1;Name=WP_000183640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457125.1;locus_tag=STY7866_RS15550;product=DTW domain-containing protein;protein_id=WP_000183640.1;transl_table=11
NZ_CAAR01000413.1	RefSeq	gene	2098	2517	.	-	.	ID=gene-STY7866_RS15555;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=STY7866_RS15555
NZ_CAAR01000413.1	Protein Homology	CDS	2098	2517	.	-	0	ID=cds-WP_001098738.1;Parent=gene-STY7866_RS15555;Dbxref=Genbank:WP_001098738.1;Name=WP_001098738.1;gbkey=CDS;gene=trxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457124.1;locus_tag=STY7866_RS15555;product=thioredoxin TrxC;protein_id=WP_001098738.1;transl_table=11
NZ_CAAR01000413.1	RefSeq	gene	2721	3758	.	+	.	ID=gene-STY7866_RS15560;Name=STY7866_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15560
NZ_CAAR01000413.1	Protein Homology	CDS	2721	3758	.	+	0	ID=cds-WP_000997368.1;Parent=gene-STY7866_RS15560;Dbxref=Genbank:WP_000997368.1;Name=WP_000997368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457123.1;locus_tag=STY7866_RS15560;product=tRNA/rRNA methyltransferase;protein_id=WP_000997368.1;transl_table=11
NZ_CAAR01000413.1	RefSeq	gene	3874	4563	.	-	.	ID=gene-STY7866_RS15565;Name=STY7866_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15565
NZ_CAAR01000413.1	Protein Homology	CDS	3874	4563	.	-	0	ID=cds-WP_000179978.1;Parent=gene-STY7866_RS15565;Dbxref=Genbank:WP_000179978.1;Name=WP_000179978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457122.1;locus_tag=STY7866_RS15565;product=uracil-DNA glycosylase;protein_id=WP_000179978.1;transl_table=11
NZ_CAAR01000413.1	RefSeq	gene	4881	5264	.	+	.	ID=gene-STY7866_RS15570;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=STY7866_RS15570
NZ_CAAR01000413.1	Protein Homology	CDS	4881	5264	.	+	0	ID=cds-WP_000627811.1;Parent=gene-STY7866_RS15570;Dbxref=Genbank:WP_000627811.1;Name=WP_000627811.1;gbkey=CDS;gene=grcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457121.1;locus_tag=STY7866_RS15570;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627811.1;transl_table=11
NZ_CAAR01000413.1	RefSeq	gene	5326	5913	.	-	.	ID=gene-STY7866_RS15575;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=STY7866_RS15575
NZ_CAAR01000413.1	Protein Homology	CDS	5326	5913	.	-	0	ID=cds-WP_000188410.1;Parent=gene-STY7866_RS15575;Dbxref=Genbank:WP_000188410.1;Name=WP_000188410.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457120.1;locus_tag=STY7866_RS15575;product=cysteine/O-acetylserine transporter;protein_id=WP_000188410.1;transl_table=11
NZ_CAAR01000413.1	RefSeq	gene	6016	6538	.	+	.	ID=gene-STY7866_RS15580;Name=STY7866_RS15580;end_range=6538,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15580;partial=true
NZ_CAAR01000413.1	Protein Homology	CDS	6016	6538	.	+	0	ID=cds-WP_024151082.1;Parent=gene-STY7866_RS15580;Dbxref=Genbank:WP_024151082.1;Name=WP_024151082.1;end_range=6538,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=STY7866_RS15580;partial=true;product=LysR family transcriptional regulator;protein_id=WP_024151082.1;transl_table=11
##sequence-region NZ_CAAR01000412.1 1 1144
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000412.1	RefSeq	region	1	1144	.	+	.	ID=NZ_CAAR01000412.1:1..1144;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000412.1	RefSeq	gene	1	126	.	+	.	ID=gene-STY7866_RS27515;Name=STY7866_RS27515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27515;partial=true;start_range=.,1
NZ_CAAR01000412.1	Protein Homology	CDS	1	126	.	+	0	ID=cds-WP_151260007.1;Parent=gene-STY7866_RS27515;Dbxref=Genbank:WP_151260007.1;Name=WP_151260007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001350603.1;locus_tag=STY7866_RS27515;partial=true;product=hypothetical protein;protein_id=WP_151260007.1;start_range=.,1;transl_table=11
NZ_CAAR01000412.1	RefSeq	gene	141	1144	.	+	.	ID=gene-STY7866_RS15540;Name=odhB;end_range=1144,.;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=STY7866_RS15540;partial=true
NZ_CAAR01000412.1	Protein Homology	CDS	141	1144	.	+	0	ID=cds-WP_000099856.1;Parent=gene-STY7866_RS15540;Dbxref=Genbank:WP_000099856.1;Name=WP_000099856.1;end_range=1144,.;gbkey=CDS;gene=odhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455293.1;locus_tag=STY7866_RS15540;partial=true;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099856.1;transl_table=11
##sequence-region NZ_CAAR01000411.1 1 6968
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000411.1	RefSeq	region	1	6968	.	+	.	ID=NZ_CAAR01000411.1:1..6968;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000411.1	RefSeq	gene	1	1187	.	-	.	ID=gene-STY7866_RS15500;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=STY7866_RS15500;partial=true;start_range=.,1
NZ_CAAR01000411.1	Protein Homology	CDS	1	1187	.	-	0	ID=cds-WP_001764453.1;Parent=gene-STY7866_RS15500;Dbxref=Genbank:WP_001764453.1;Name=WP_001764453.1;gbkey=CDS;gene=dnaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=STY7866_RS15500;partial=true;product=molecular chaperone DnaK;protein_id=WP_001764453.1;start_range=.,1;transl_table=11
NZ_CAAR01000411.1	RefSeq	gene	1536	1940	.	+	.	ID=gene-STY7866_RS15505;Name=STY7866_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15505
NZ_CAAR01000411.1	Protein Homology	CDS	1536	1940	.	+	0	ID=cds-WP_001258093.1;Parent=gene-STY7866_RS15505;Dbxref=Genbank:WP_001258093.1;Name=WP_001258093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454621.1;locus_tag=STY7866_RS15505;product=DUF2541 family protein;protein_id=WP_001258093.1;transl_table=11
NZ_CAAR01000411.1	RefSeq	gene	1976	2689	.	+	.	ID=gene-STY7866_RS15510;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=STY7866_RS15510
NZ_CAAR01000411.1	Protein Homology	CDS	1976	2689	.	+	0	ID=cds-WP_001103477.1;Parent=gene-STY7866_RS15510;Dbxref=Genbank:WP_001103477.1;Name=WP_001103477.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454620.1;locus_tag=STY7866_RS15510;product=acidic protein MsyB;protein_id=WP_001103477.1;transl_table=11
NZ_CAAR01000411.1	RefSeq	gene	2839	3405	.	+	.	ID=gene-STY7866_RS15515;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=STY7866_RS15515
NZ_CAAR01000411.1	Protein Homology	CDS	2839	3405	.	+	0	ID=cds-WP_000528527.1;Parent=gene-STY7866_RS15515;Dbxref=Genbank:WP_000528527.1;Name=WP_000528527.1;gbkey=CDS;gene=satP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454619.1;locus_tag=STY7866_RS15515;product=acetate uptake transporter;protein_id=WP_000528527.1;transl_table=11
NZ_CAAR01000411.1	RefSeq	gene	3462	4052	.	-	.	ID=gene-STY7866_RS15520;Name=STY7866_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15520
NZ_CAAR01000411.1	Protein Homology	CDS	3462	4052	.	-	0	ID=cds-WP_001094677.1;Parent=gene-STY7866_RS15520;Dbxref=Genbank:WP_001094677.1;Name=WP_001094677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454618.1;locus_tag=STY7866_RS15520;product=molybdopterin adenylyltransferase;protein_id=WP_001094677.1;transl_table=11
NZ_CAAR01000411.1	RefSeq	gene	4163	5116	.	-	.	ID=gene-STY7866_RS15525;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=STY7866_RS15525
NZ_CAAR01000411.1	Protein Homology	CDS	4163	5116	.	-	0	ID=cds-WP_000130175.1;Parent=gene-STY7866_RS15525;Dbxref=Genbank:WP_000130175.1;Name=WP_000130175.1;gbkey=CDS;gene=tal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454617.1;locus_tag=STY7866_RS15525;product=transaldolase;protein_id=WP_000130175.1;transl_table=11
NZ_CAAR01000411.1	RefSeq	gene	5385	6815	.	+	.	ID=gene-STY7866_RS15530;Name=STY7866_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15530
NZ_CAAR01000411.1	Protein Homology	CDS	5385	6815	.	+	0	ID=cds-WP_001113824.1;Parent=gene-STY7866_RS15530;Dbxref=Genbank:WP_001113824.1;Name=WP_001113824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454616.1;locus_tag=STY7866_RS15530;product=sodium:alanine symporter family protein;protein_id=WP_001113824.1;transl_table=11
##sequence-region NZ_CAAR01000410.1 1 1689
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000410.1	RefSeq	region	1	1689	.	+	.	ID=NZ_CAAR01000410.1:1..1689;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000410.1	RefSeq	pseudogene	1	202	.	-	.	ID=gene-STY7866_RS15490;Name=STY7866_RS15490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15490;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000410.1	Protein Homology	CDS	1	202	.	-	0	ID=cds-STY7866_RS15490;Parent=gene-STY7866_RS15490;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457615.1;locus_tag=STY7866_RS15490;partial=true;product=DedA family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000410.1	RefSeq	pseudogene	652	1689	.	-	.	ID=gene-STY7866_RS15495;Name=sstT;end_range=1689,.;gbkey=Gene;gene=sstT;gene_biotype=pseudogene;locus_tag=STY7866_RS15495;partial=true;pseudo=true
NZ_CAAR01000410.1	Protein Homology	CDS	652	1689	.	-	2	ID=cds-STY7866_RS15495;Parent=gene-STY7866_RS15495;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=1689,.;gbkey=CDS;gene=sstT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457614.1;locus_tag=STY7866_RS15495;partial=true;product=serine/threonine transporter SstT;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000409.1 1 8385
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000409.1	RefSeq	region	1	8385	.	+	.	ID=NZ_CAAR01000409.1:1..8385;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000409.1	RefSeq	gene	172	726	.	+	.	ID=gene-STY7866_RS15435;Name=STY7866_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15435
NZ_CAAR01000409.1	Protein Homology	CDS	172	726	.	+	0	ID=cds-WP_001285635.1;Parent=gene-STY7866_RS15435;Dbxref=Genbank:WP_001285635.1;Name=WP_001285635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458500.1;locus_tag=STY7866_RS15435;product=gamma carbonic anhydrase family protein;protein_id=WP_001285635.1;transl_table=11
NZ_CAAR01000409.1	RefSeq	gene	702	959	.	-	.	ID=gene-STY7866_RS15440;Name=STY7866_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15440
NZ_CAAR01000409.1	Protein Homology	CDS	702	959	.	-	0	ID=cds-WP_001070570.1;Parent=gene-STY7866_RS15440;Dbxref=Genbank:WP_001070570.1;Name=WP_001070570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458499.1;locus_tag=STY7866_RS15440;product=DUF1488 domain-containing protein;protein_id=WP_001070570.1;transl_table=11
NZ_CAAR01000409.1	RefSeq	gene	956	1774	.	-	.	ID=gene-STY7866_RS15445;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=STY7866_RS15445
NZ_CAAR01000409.1	Protein Homology	CDS	956	1774	.	-	0	ID=cds-WP_000388662.1;Parent=gene-STY7866_RS15445;Dbxref=Genbank:WP_000388662.1;Name=WP_000388662.1;gbkey=CDS;gene=aroE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458498.1;locus_tag=STY7866_RS15445;product=shikimate dehydrogenase;protein_id=WP_000388662.1;transl_table=11
NZ_CAAR01000409.1	RefSeq	gene	1779	2351	.	-	.	ID=gene-STY7866_RS15450;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=STY7866_RS15450
NZ_CAAR01000409.1	Protein Homology	CDS	1779	2351	.	-	0	ID=cds-WP_001063622.1;Parent=gene-STY7866_RS15450;Dbxref=Genbank:WP_001063622.1;Name=WP_001063622.1;gbkey=CDS;gene=tsaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458497.1;locus_tag=STY7866_RS15450;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001063622.1;transl_table=11
NZ_CAAR01000409.1	RefSeq	gene	2356	2898	.	-	.	ID=gene-STY7866_RS15455;Name=STY7866_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15455
NZ_CAAR01000409.1	Protein Homology	CDS	2356	2898	.	-	0	ID=cds-WP_001129710.1;Parent=gene-STY7866_RS15455;Dbxref=Genbank:WP_001129710.1;Name=WP_001129710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458496.1;locus_tag=STY7866_RS15455;product=DNA topoisomerase;protein_id=WP_001129710.1;transl_table=11
NZ_CAAR01000409.1	RefSeq	gene	2925	3398	.	-	.	ID=gene-STY7866_RS15460;Name=STY7866_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15460
NZ_CAAR01000409.1	Protein Homology	CDS	2925	3398	.	-	0	ID=cds-WP_000460663.1;Parent=gene-STY7866_RS15460;Dbxref=Genbank:WP_000460663.1;Name=WP_000460663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=STY7866_RS15460;product=DUF494 domain-containing protein;protein_id=WP_000460663.1;transl_table=11
NZ_CAAR01000409.1	RefSeq	gene	3370	4494	.	-	.	ID=gene-STY7866_RS15465;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=STY7866_RS15465
NZ_CAAR01000409.1	Protein Homology	CDS	3370	4494	.	-	0	ID=cds-WP_000124521.1;Parent=gene-STY7866_RS15465;Dbxref=Genbank:WP_000124521.1;Name=WP_000124521.1;gbkey=CDS;gene=dprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458494.1;locus_tag=STY7866_RS15465;product=DNA-protecting protein DprA;protein_id=WP_000124521.1;transl_table=11
NZ_CAAR01000409.1	RefSeq	gene	4626	5135	.	+	.	ID=gene-STY7866_RS15470;Name=STY7866_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15470
NZ_CAAR01000409.1	Protein Homology	CDS	4626	5135	.	+	0	ID=cds-WP_000114992.1;Parent=gene-STY7866_RS15470;Dbxref=Genbank:WP_000114992.1;Name=WP_000114992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458493.1;locus_tag=STY7866_RS15470;product=peptide deformylase;protein_id=WP_000114992.1;transl_table=11
NZ_CAAR01000409.1	RefSeq	gene	5151	6098	.	+	.	ID=gene-STY7866_RS15475;Name=STY7866_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15475
NZ_CAAR01000409.1	Protein Homology	CDS	5151	6098	.	+	0	ID=cds-WP_001285161.1;Parent=gene-STY7866_RS15475;Dbxref=Genbank:WP_001285161.1;Name=WP_001285161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458492.1;locus_tag=STY7866_RS15475;product=methionyl-tRNA formyltransferase;protein_id=WP_001285161.1;transl_table=11
NZ_CAAR01000409.1	RefSeq	pseudogene	6150	7440	.	+	.	ID=gene-STY7866_RS15480;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=pseudogene;locus_tag=STY7866_RS15480;pseudo=true
NZ_CAAR01000409.1	Protein Homology	CDS	6150	7440	.	+	0	ID=cds-STY7866_RS15480;Parent=gene-STY7866_RS15480;Note=frameshifted;gbkey=CDS;gene=rsmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458491.1;locus_tag=STY7866_RS15480;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;pseudo=true;transl_table=11
NZ_CAAR01000409.1	RefSeq	gene	7462	8385	.	+	.	ID=gene-STY7866_RS15485;Name=trkA;end_range=8385,.;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=STY7866_RS15485;partial=true
NZ_CAAR01000409.1	Protein Homology	CDS	7462	8385	.	+	0	ID=cds-WP_000691370.1;Parent=gene-STY7866_RS15485;Dbxref=Genbank:WP_000691370.1;Name=WP_000691370.1;end_range=8385,.;gbkey=CDS;gene=trkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=STY7866_RS15485;partial=true;product=Trk system potassium transporter TrkA;protein_id=WP_000691370.1;transl_table=11
##sequence-region NZ_CAAR01000408.1 1 4209
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000408.1	RefSeq	region	1	4209	.	+	.	ID=NZ_CAAR01000408.1:1..4209;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000408.1	RefSeq	gene	1136	2065	.	-	.	ID=gene-STY7866_RS15410;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=STY7866_RS15410
NZ_CAAR01000408.1	Protein Homology	CDS	1136	2065	.	-	0	ID=cds-WP_000432695.1;Parent=gene-STY7866_RS15410;Dbxref=Genbank:WP_000432695.1;Name=WP_000432695.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457269.1;locus_tag=STY7866_RS15410;product=transcriptional regulator HilD;protein_id=WP_000432695.1;transl_table=11
NZ_CAAR01000408.1	RefSeq	gene	2381	3559	.	+	.	ID=gene-STY7866_RS15415;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=STY7866_RS15415
NZ_CAAR01000408.1	Protein Homology	CDS	2381	3559	.	+	0	ID=cds-WP_000450189.1;Parent=gene-STY7866_RS15415;Dbxref=Genbank:WP_000450189.1;Name=WP_000450189.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457268.1;locus_tag=STY7866_RS15415;product=type III secretion system inner membrane ring protein PrgH;protein_id=WP_000450189.1;transl_table=11
NZ_CAAR01000408.1	RefSeq	gene	3584	3826	.	+	.	ID=gene-STY7866_RS15420;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=STY7866_RS15420
NZ_CAAR01000408.1	Protein Homology	CDS	3584	3826	.	+	0	ID=cds-WP_001143299.1;Parent=gene-STY7866_RS15420;Dbxref=Genbank:WP_001143299.1;Name=WP_001143299.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457267.1;locus_tag=STY7866_RS15420;product=type III secretion system needle complex protein PrgI;protein_id=WP_001143299.1;transl_table=11
NZ_CAAR01000408.1	RefSeq	gene	3845	4150	.	+	.	ID=gene-STY7866_RS15425;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=STY7866_RS15425
NZ_CAAR01000408.1	Protein Homology	CDS	3845	4150	.	+	0	ID=cds-WP_000020428.1;Parent=gene-STY7866_RS15425;Dbxref=Genbank:WP_000020428.1;Name=WP_000020428.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457266.1;locus_tag=STY7866_RS15425;product=type III secretion system inner rod protein PrgJ;protein_id=WP_000020428.1;transl_table=11
##sequence-region NZ_CAAR01000407.1 1 2994
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000407.1	RefSeq	region	1	2994	.	+	.	ID=NZ_CAAR01000407.1:1..2994;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000407.1	RefSeq	gene	1	647	.	-	.	ID=gene-STY7866_RS15390;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=STY7866_RS15390;partial=true;start_range=.,1
NZ_CAAR01000407.1	Protein Homology	CDS	1	647	.	-	0	ID=cds-WP_001764434.1;Parent=gene-STY7866_RS15390;Dbxref=Genbank:WP_001764434.1;Name=WP_001764434.1;gbkey=CDS;gene=proQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456351.1;locus_tag=STY7866_RS15390;partial=true;product=RNA chaperone ProQ;protein_id=WP_001764434.1;start_range=.,1;transl_table=11
NZ_CAAR01000407.1	RefSeq	gene	745	1329	.	-	.	ID=gene-STY7866_RS15395;Name=STY7866_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15395
NZ_CAAR01000407.1	Protein Homology	CDS	745	1329	.	-	0	ID=cds-WP_000145726.1;Parent=gene-STY7866_RS15395;Dbxref=Genbank:WP_000145726.1;Name=WP_000145726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456352.1;locus_tag=STY7866_RS15395;product=GAF domain-containing protein;protein_id=WP_000145726.1;transl_table=11
NZ_CAAR01000407.1	RefSeq	pseudogene	1371	2655	.	+	.	ID=gene-STY7866_RS15400;Name=STY7866_RS15400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15400;pseudo=true
NZ_CAAR01000407.1	Protein Homology	CDS	1371	2655	.	+	0	ID=cds-STY7866_RS15400;Parent=gene-STY7866_RS15400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456353.1;locus_tag=STY7866_RS15400;product=paraquat-inducible protein A;pseudo=true;transl_table=11
NZ_CAAR01000407.1	RefSeq	gene	2618	2994	.	+	.	ID=gene-STY7866_RS15405;Name=STY7866_RS15405;end_range=2994,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15405;partial=true
NZ_CAAR01000407.1	Protein Homology	CDS	2618	2994	.	+	0	ID=cds-WP_151260006.1;Parent=gene-STY7866_RS15405;Dbxref=Genbank:WP_151260006.1;Name=WP_151260006.1;end_range=2994,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460805.1;locus_tag=STY7866_RS15405;partial=true;product=MCE family protein;protein_id=WP_151260006.1;transl_table=11
##sequence-region NZ_CAAR01000406.1 1 5746
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000406.1	RefSeq	region	1	5746	.	+	.	ID=NZ_CAAR01000406.1:1..5746;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000406.1	RefSeq	gene	57	575	.	+	.	ID=gene-STY7866_RS15355;Name=STY7866_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15355
NZ_CAAR01000406.1	Protein Homology	CDS	57	575	.	+	0	ID=cds-WP_001212373.1;Parent=gene-STY7866_RS15355;Dbxref=Genbank:WP_001212373.1;Name=WP_001212373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457141.1;locus_tag=STY7866_RS15355;product=YfiR family protein;protein_id=WP_001212373.1;transl_table=11
NZ_CAAR01000406.1	RefSeq	gene	568	1788	.	+	.	ID=gene-STY7866_RS15360;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=STY7866_RS15360
NZ_CAAR01000406.1	Protein Homology	CDS	568	1788	.	+	0	ID=cds-WP_001030993.1;Parent=gene-STY7866_RS15360;Dbxref=Genbank:WP_001030993.1;Name=WP_001030993.1;gbkey=CDS;gene=dgcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457142.1;locus_tag=STY7866_RS15360;product=diguanylate cyclase DgcN;protein_id=WP_001030993.1;transl_table=11
NZ_CAAR01000406.1	RefSeq	gene	1945	2292	.	-	.	ID=gene-STY7866_RS15365;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=STY7866_RS15365
NZ_CAAR01000406.1	Protein Homology	CDS	1945	2292	.	-	0	ID=cds-WP_000065257.1;Parent=gene-STY7866_RS15365;Dbxref=Genbank:WP_000065257.1;Name=WP_000065257.1;gbkey=CDS;gene=rplS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=STY7866_RS15365;product=50S ribosomal protein L19;protein_id=WP_000065257.1;transl_table=11
NZ_CAAR01000406.1	RefSeq	gene	2333	3100	.	-	.	ID=gene-STY7866_RS15370;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=STY7866_RS15370
NZ_CAAR01000406.1	Protein Homology	CDS	2333	3100	.	-	0	ID=cds-WP_000469802.1;Parent=gene-STY7866_RS15370;Dbxref=Genbank:WP_000469802.1;Name=WP_000469802.1;gbkey=CDS;gene=trmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457144.1;locus_tag=STY7866_RS15370;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000469802.1;transl_table=11
NZ_CAAR01000406.1	RefSeq	gene	3145	3654	.	-	.	ID=gene-STY7866_RS15375;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=STY7866_RS15375
NZ_CAAR01000406.1	Protein Homology	CDS	3145	3654	.	-	0	ID=cds-WP_151260005.1;Parent=gene-STY7866_RS15375;Dbxref=Genbank:WP_151260005.1;Name=WP_151260005.1;gbkey=CDS;gene=rimM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014532315.1;locus_tag=STY7866_RS15375;product=ribosome maturation factor RimM;protein_id=WP_151260005.1;transl_table=11
NZ_CAAR01000406.1	RefSeq	gene	3713	3961	.	-	.	ID=gene-STY7866_RS15380;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=STY7866_RS15380
NZ_CAAR01000406.1	Protein Homology	CDS	3713	3961	.	-	0	ID=cds-WP_000256453.1;Parent=gene-STY7866_RS15380;Dbxref=Genbank:WP_000256453.1;Name=WP_000256453.1;gbkey=CDS;gene=rpsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311499.1;locus_tag=STY7866_RS15380;product=30S ribosomal protein S16;protein_id=WP_000256453.1;transl_table=11
NZ_CAAR01000406.1	RefSeq	gene	4305	5666	.	-	.	ID=gene-STY7866_RS15385;Name=STY7866_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15385
NZ_CAAR01000406.1	Protein Homology	CDS	4305	5666	.	-	0	ID=cds-WP_000460052.1;Parent=gene-STY7866_RS15385;Dbxref=Genbank:WP_000460052.1;Name=WP_000460052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=STY7866_RS15385;product=signal recognition particle protein;protein_id=WP_000460052.1;transl_table=11
##sequence-region NZ_CAAR01000405.1 1 2636
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000405.1	RefSeq	region	1	2636	.	+	.	ID=NZ_CAAR01000405.1:1..2636;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000405.1	RefSeq	pseudogene	1	704	.	-	.	ID=gene-STY7866_RS15340;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=pseudogene;locus_tag=STY7866_RS15340;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000405.1	Protein Homology	CDS	1	704	.	-	0	ID=cds-STY7866_RS15340;Parent=gene-STY7866_RS15340;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458181.1;locus_tag=STY7866_RS15340;partial=true;product=xanthine/proton symporter XanP;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000405.1	RefSeq	gene	931	2136	.	+	.	ID=gene-STY7866_RS15345;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=STY7866_RS15345
NZ_CAAR01000405.1	Protein Homology	CDS	931	2136	.	+	0	ID=cds-WP_000462255.1;Parent=gene-STY7866_RS15345;Dbxref=Genbank:WP_000462255.1;Name=WP_000462255.1;gbkey=CDS;gene=gltS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458182.1;locus_tag=STY7866_RS15345;product=sodium/glutamate symporter;protein_id=WP_000462255.1;transl_table=11
NZ_CAAR01000405.1	RefSeq	pseudogene	2172	2636	.	-	.	ID=gene-STY7866_RS15350;Name=STY7866_RS15350;end_range=2636,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15350;partial=true;pseudo=true
NZ_CAAR01000405.1	Protein Homology	CDS	2172	2636	.	-	0	ID=cds-STY7866_RS15350;Parent=gene-STY7866_RS15350;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2636,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458183.1;locus_tag=STY7866_RS15350;partial=true;product=ATP-dependent DNA helicase RecG;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000404.1 1 1110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000404.1	RefSeq	region	1	1110	.	+	.	ID=NZ_CAAR01000404.1:1..1110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000404.1	RefSeq	pseudogene	1	635	.	-	.	ID=gene-STY7866_RS15330;Name=STY7866_RS15330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15330;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000404.1	Protein Homology	CDS	1	635	.	-	0	ID=cds-STY7866_RS15330;Parent=gene-STY7866_RS15330;Note=internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=STY7866_RS15330;partial=true;product=PLP-dependent aminotransferase family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000404.1	RefSeq	gene	724	1110	.	+	.	ID=gene-STY7866_RS15335;Name=STY7866_RS15335;end_range=1110,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15335;partial=true
NZ_CAAR01000404.1	Protein Homology	CDS	724	1110	.	+	0	ID=cds-WP_000209787.1;Parent=gene-STY7866_RS15335;Dbxref=Genbank:WP_000209787.1;Name=WP_000209787.1;end_range=1110,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457202.1;locus_tag=STY7866_RS15335;partial=true;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000209787.1;transl_table=11
##sequence-region NZ_CAAR01000403.1 1 3444
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000403.1	RefSeq	region	1	3444	.	+	.	ID=NZ_CAAR01000403.1:1..3444;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000403.1	RefSeq	gene	1	650	.	+	.	ID=gene-STY7866_RS15315;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=STY7866_RS15315;partial=true;start_range=.,1
NZ_CAAR01000403.1	Protein Homology	CDS	1	650	.	+	2	ID=cds-WP_000596164.1;Parent=gene-STY7866_RS15315;Dbxref=Genbank:WP_000596164.1;Name=WP_000596164.1;gbkey=CDS;gene=ychF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=STY7866_RS15315;partial=true;product=redox-regulated ATPase YchF;protein_id=WP_000596164.1;start_range=.,1;transl_table=11
NZ_CAAR01000403.1	RefSeq	pseudogene	809	2075	.	-	.	ID=gene-STY7866_RS15320;Name=STY7866_RS15320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15320;pseudo=true
NZ_CAAR01000403.1	Protein Homology	CDS	809	2075	.	-	0	ID=cds-STY7866_RS15320;Parent=gene-STY7866_RS15320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456295.1;locus_tag=STY7866_RS15320;product=DUF4427 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000403.1	RefSeq	pseudogene	2570	3444	.	+	.	ID=gene-STY7866_RS15325;Name=STY7866_RS15325;end_range=3444,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15325;partial=true;pseudo=true
NZ_CAAR01000403.1	Protein Homology	CDS	2570	3444	.	+	0	ID=cds-STY7866_RS15325;Parent=gene-STY7866_RS15325;Note=internal stop%3B incomplete%3B missing C-terminus;end_range=3444,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=STY7866_RS15325;partial=true;product=hydrogenase small subunit;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000402.1 1 1584
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000402.1	RefSeq	region	1	1584	.	+	.	ID=NZ_CAAR01000402.1:1..1584;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000402.1	RefSeq	pseudogene	1	319	.	-	.	ID=gene-STY7866_RS15300;Name=STY7866_RS15300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15300;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000402.1	Protein Homology	CDS	1	319	.	-	0	ID=cds-STY7866_RS15300;Parent=gene-STY7866_RS15300;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=STY7866_RS15300;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000402.1	RefSeq	gene	593	718	.	-	.	ID=gene-STY7866_RS27505;Name=STY7866_RS27505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27505
NZ_CAAR01000402.1	Protein Homology	CDS	593	718	.	-	0	ID=cds-WP_001697360.1;Parent=gene-STY7866_RS27505;Dbxref=Genbank:WP_001697360.1;Name=WP_001697360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697360.1;locus_tag=STY7866_RS27505;product=hypothetical protein;protein_id=WP_001697360.1;transl_table=11
NZ_CAAR01000402.1	RefSeq	pseudogene	673	1169	.	+	.	ID=gene-STY7866_RS27510;Name=STY7866_RS27510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27510;pseudo=true
NZ_CAAR01000402.1	Protein Homology	CDS	673	1169	.	+	0	ID=cds-STY7866_RS27510;Parent=gene-STY7866_RS27510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001674837.1;locus_tag=STY7866_RS27510;product=fimbrial protein SefA;pseudo=true;transl_table=11
NZ_CAAR01000402.1	RefSeq	pseudogene	1291	1584	.	+	.	ID=gene-STY7866_RS15310;Name=STY7866_RS15310;end_range=1584,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15310;partial=true;pseudo=true
NZ_CAAR01000402.1	Protein Homology	CDS	1291	1584	.	+	0	ID=cds-STY7866_RS15310;Parent=gene-STY7866_RS15310;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=1584,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458913.1;locus_tag=STY7866_RS15310;partial=true;product=fimbria/pilus periplasmic chaperone;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000401.1 1 2635
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000401.1	RefSeq	region	1	2635	.	+	.	ID=NZ_CAAR01000401.1:1..2635;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000401.1	RefSeq	pseudogene	1	415	.	+	.	ID=gene-STY7866_RS15280;Name=STY7866_RS15280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15280;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000401.1	Protein Homology	CDS	1	415	.	+	1	ID=cds-STY7866_RS15280;Parent=gene-STY7866_RS15280;Note=catalyzes the interconversion of D-xylose to D-xylulose%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458266.1;locus_tag=STY7866_RS15280;partial=true;product=xylose isomerase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000401.1	RefSeq	gene	515	1969	.	+	.	ID=gene-STY7866_RS15285;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=STY7866_RS15285
NZ_CAAR01000401.1	Protein Homology	CDS	515	1969	.	+	0	ID=cds-WP_000275326.1;Parent=gene-STY7866_RS15285;Dbxref=Genbank:WP_000275326.1;Name=WP_000275326.1;gbkey=CDS;gene=xylB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=STY7866_RS15285;product=xylulokinase;protein_id=WP_000275326.1;transl_table=11
NZ_CAAR01000401.1	RefSeq	gene	2144	2497	.	+	.	ID=gene-STY7866_RS15290;Name=STY7866_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15290
NZ_CAAR01000401.1	Protein Homology	CDS	2144	2497	.	+	0	ID=cds-WP_000340932.1;Parent=gene-STY7866_RS15290;Dbxref=Genbank:WP_000340932.1;Name=WP_000340932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458268.1;locus_tag=STY7866_RS15290;product=membrane protein;protein_id=WP_000340932.1;transl_table=11
NZ_CAAR01000401.1	RefSeq	pseudogene	2520	2635	.	-	.	ID=gene-STY7866_RS15295;Name=STY7866_RS15295;end_range=2635,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15295;partial=true;pseudo=true
NZ_CAAR01000401.1	Protein Homology	CDS	2520	2635	.	-	2	ID=cds-STY7866_RS15295;Parent=gene-STY7866_RS15295;Note=involved in enterobacterial common antigen biosynthesis%3B catalyzes the addition of O-acetyl groups to the N-acetyl-D-glucosamine residues of the trisaccharide repeat units of the enterobacterial common antigen%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2635,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=STY7866_RS15295;partial=true;product=acyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000400.1 1 2541
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000400.1	RefSeq	region	1	2541	.	+	.	ID=NZ_CAAR01000400.1:1..2541;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000400.1	RefSeq	gene	40	1812	.	+	.	ID=gene-STY7866_RS15270;Name=STY7866_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15270
NZ_CAAR01000400.1	Protein Homology	CDS	40	1812	.	+	0	ID=cds-WP_001235563.1;Parent=gene-STY7866_RS15270;Dbxref=Genbank:WP_001235563.1;Name=WP_001235563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455058.1;locus_tag=STY7866_RS15270;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235563.1;transl_table=11
NZ_CAAR01000400.1	RefSeq	pseudogene	1805	2541	.	+	.	ID=gene-STY7866_RS15275;Name=STY7866_RS15275;end_range=2541,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15275;partial=true;pseudo=true
NZ_CAAR01000400.1	Protein Homology	CDS	1805	2541	.	+	0	ID=cds-STY7866_RS15275;Parent=gene-STY7866_RS15275;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2541,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455059.1;locus_tag=STY7866_RS15275;partial=true;product=multidrug ABC transporter permease/ATP-binding protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000399.1 1 7876
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000399.1	RefSeq	region	1	7876	.	+	.	ID=NZ_CAAR01000399.1:1..7876;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000399.1	RefSeq	gene	54	641	.	-	.	ID=gene-STY7866_RS15225;Name=pilP;gbkey=Gene;gene=pilP;gene_biotype=protein_coding;locus_tag=STY7866_RS15225
NZ_CAAR01000399.1	Protein Homology	CDS	54	641	.	-	0	ID=cds-WP_000928959.1;Parent=gene-STY7866_RS15225;Dbxref=Genbank:WP_000928959.1;Name=WP_000928959.1;gbkey=CDS;gene=pilP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000928959.1;locus_tag=STY7866_RS15225;product=type IV pilus biogenesis protein PilP;protein_id=WP_000928959.1;transl_table=11
NZ_CAAR01000399.1	RefSeq	gene	622	1917	.	-	.	ID=gene-STY7866_RS15230;Name=STY7866_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15230
NZ_CAAR01000399.1	Protein Homology	CDS	622	1917	.	-	0	ID=cds-WP_000774611.1;Parent=gene-STY7866_RS15230;Dbxref=Genbank:WP_000774611.1;Name=WP_000774611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458631.1;locus_tag=STY7866_RS15230;product=type 4b pilus protein PilO2;protein_id=WP_000774611.1;transl_table=11
NZ_CAAR01000399.1	RefSeq	pseudogene	1910	3173	.	-	.	ID=gene-STY7866_RS15235;Name=STY7866_RS15235;end_range=3173,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15235;partial=true;pseudo=true
NZ_CAAR01000399.1	Protein Homology	CDS	1910	3173	.	-	0	ID=cds-STY7866_RS15235;Parent=gene-STY7866_RS15235;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3173,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088221.1;locus_tag=STY7866_RS15235;partial=true;product=PilN family type IVB pilus formation outer membrane protein;pseudo=true;transl_table=11
NZ_CAAR01000399.1	RefSeq	pseudogene	3166	3237	.	+	.	ID=gene-STY7866_RS27495;Name=STY7866_RS27495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27495;partial=true;pseudo=true;start_range=.,3166
NZ_CAAR01000399.1	Protein Homology	CDS	3166	3237	.	+	0	ID=cds-STY7866_RS27495;Parent=gene-STY7866_RS27495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000539772.1;locus_tag=STY7866_RS27495;partial=true;product=pilus assembly protein PilP;pseudo=true;start_range=.,3166;transl_table=11
NZ_CAAR01000399.1	RefSeq	pseudogene	3348	3674	.	+	.	ID=gene-STY7866_RS27500;Name=STY7866_RS27500;end_range=3674,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27500;partial=true;pseudo=true
NZ_CAAR01000399.1	Protein Homology	CDS	3348	3674	.	+	0	ID=cds-STY7866_RS27500;Parent=gene-STY7866_RS27500;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3674,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088221.1;locus_tag=STY7866_RS27500;partial=true;product=PilN family type IVB pilus formation outer membrane protein;pseudo=true;transl_table=11
NZ_CAAR01000399.1	RefSeq	gene	3620	4039	.	-	.	ID=gene-STY7866_RS15240;Name=STY7866_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15240
NZ_CAAR01000399.1	Protein Homology	CDS	3620	4039	.	-	0	ID=cds-WP_000539682.1;Parent=gene-STY7866_RS15240;Dbxref=Genbank:WP_000539682.1;Name=WP_000539682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458629.1;locus_tag=STY7866_RS15240;product=type IV pilus biogenesis protein PilM;protein_id=WP_000539682.1;transl_table=11
NZ_CAAR01000399.1	RefSeq	pseudogene	4042	5287	.	-	.	ID=gene-STY7866_RS15245;Name=STY7866_RS15245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15245;pseudo=true
NZ_CAAR01000399.1	Protein Homology	CDS	4042	5287	.	-	0	ID=cds-STY7866_RS15245;Parent=gene-STY7866_RS15245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458628.1;locus_tag=STY7866_RS15245;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000399.1	RefSeq	pseudogene	5453	6403	.	-	.	ID=gene-STY7866_RS15250;Name=STY7866_RS15250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15250;pseudo=true
NZ_CAAR01000399.1	Protein Homology	CDS	5453	6403	.	-	0	ID=cds-STY7866_RS15250;Parent=gene-STY7866_RS15250;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368221.1;locus_tag=STY7866_RS15250;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11
NZ_CAAR01000399.1	RefSeq	gene	6469	7005	.	-	.	ID=gene-STY7866_RS15255;Name=STY7866_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15255
NZ_CAAR01000399.1	Protein Homology	CDS	6469	7005	.	-	0	ID=cds-WP_000157067.1;Parent=gene-STY7866_RS15255;Dbxref=Genbank:WP_000157067.1;Name=WP_000157067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458627.1;locus_tag=STY7866_RS15255;product=single-stranded DNA-binding protein;protein_id=WP_000157067.1;transl_table=11
NZ_CAAR01000399.1	RefSeq	gene	7018	7236	.	-	.	ID=gene-STY7866_RS15260;Name=STY7866_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15260
NZ_CAAR01000399.1	Protein Homology	CDS	7018	7236	.	-	0	ID=cds-WP_000958171.1;Parent=gene-STY7866_RS15260;Dbxref=Genbank:WP_000958171.1;Name=WP_000958171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458626.1;locus_tag=STY7866_RS15260;product=hypothetical protein;protein_id=WP_000958171.1;transl_table=11
NZ_CAAR01000399.1	RefSeq	gene	7317	7766	.	-	.	ID=gene-STY7866_RS15265;Name=STY7866_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15265
NZ_CAAR01000399.1	Protein Homology	CDS	7317	7766	.	-	0	ID=cds-WP_000032521.1;Parent=gene-STY7866_RS15265;Dbxref=Genbank:WP_000032521.1;Name=WP_000032521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458625.1;locus_tag=STY7866_RS15265;product=DUF3577 domain-containing protein;protein_id=WP_000032521.1;transl_table=11
##sequence-region NZ_CAAR01000398.1 1 7446
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000398.1	RefSeq	region	1	7446	.	+	.	ID=NZ_CAAR01000398.1:1..7446;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000398.1	RefSeq	pseudogene	1	812	.	+	.	ID=gene-STY7866_RS15190;Name=STY7866_RS15190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15190;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000398.1	Protein Homology	CDS	1	812	.	+	2	ID=cds-STY7866_RS15190;Parent=gene-STY7866_RS15190;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458390.1;locus_tag=STY7866_RS15190;partial=true;product=maltodextrin phosphorylase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000398.1	RefSeq	pseudogene	822	2901	.	+	.	ID=gene-STY7866_RS15195;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=pseudogene;locus_tag=STY7866_RS15195;pseudo=true
NZ_CAAR01000398.1	Protein Homology	CDS	822	2901	.	+	0	ID=cds-STY7866_RS15195;Parent=gene-STY7866_RS15195;Note=frameshifted;gbkey=CDS;gene=malQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458391.1;locus_tag=STY7866_RS15195;product=4-alpha-glucanotransferase;pseudo=true;transl_table=11
NZ_CAAR01000398.1	RefSeq	gene	3020	4336	.	-	.	ID=gene-STY7866_RS15200;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=STY7866_RS15200
NZ_CAAR01000398.1	Protein Homology	CDS	3020	4336	.	-	0	ID=cds-WP_001131741.1;Parent=gene-STY7866_RS15200;Dbxref=Genbank:WP_001131741.1;Name=WP_001131741.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458392.1;locus_tag=STY7866_RS15200;product=gluconate transporter;protein_id=WP_001131741.1;transl_table=11
NZ_CAAR01000398.1	RefSeq	gene	4712	5278	.	-	.	ID=gene-STY7866_RS15205;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=STY7866_RS15205
NZ_CAAR01000398.1	Protein Homology	CDS	4712	5278	.	-	0	ID=cds-WP_031626394.1;Parent=gene-STY7866_RS15205;Dbxref=Genbank:WP_031626394.1;Name=WP_031626394.1;gbkey=CDS;gene=nfuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=STY7866_RS15205;product=Fe-S biogenesis protein NfuA;protein_id=WP_031626394.1;transl_table=11
NZ_CAAR01000398.1	RefSeq	gene	5345	6028	.	-	.	ID=gene-STY7866_RS15210;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=STY7866_RS15210
NZ_CAAR01000398.1	Protein Homology	CDS	5345	6028	.	-	0	ID=cds-WP_000958739.1;Parent=gene-STY7866_RS15210;Dbxref=Genbank:WP_000958739.1;Name=WP_000958739.1;gbkey=CDS;gene=gntX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458394.1;locus_tag=STY7866_RS15210;product=DNA utilization protein GntX;protein_id=WP_000958739.1;transl_table=11
NZ_CAAR01000398.1	RefSeq	gene	6066	6836	.	+	.	ID=gene-STY7866_RS15215;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=STY7866_RS15215
NZ_CAAR01000398.1	Protein Homology	CDS	6066	6836	.	+	0	ID=cds-WP_000998145.1;Parent=gene-STY7866_RS15215;Dbxref=Genbank:WP_000998145.1;Name=WP_000998145.1;gbkey=CDS;gene=bioH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458395.1;locus_tag=STY7866_RS15215;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_000998145.1;transl_table=11
NZ_CAAR01000398.1	RefSeq	gene	6872	7446	.	-	.	ID=gene-STY7866_RS15220;Name=STY7866_RS15220;end_range=7446,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15220;partial=true
NZ_CAAR01000398.1	Protein Homology	CDS	6872	7446	.	-	2	ID=cds-WP_001764377.1;Parent=gene-STY7866_RS15220;Dbxref=Genbank:WP_001764377.1;Name=WP_001764377.1;end_range=7446,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458396.1;locus_tag=STY7866_RS15220;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_001764377.1;transl_table=11
##sequence-region NZ_CAAR01000397.1 1 905
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000397.1	RefSeq	region	1	905	.	+	.	ID=NZ_CAAR01000397.1:1..905;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000397.1	RefSeq	pseudogene	1	138	.	-	.	ID=gene-STY7866_RS15180;Name=STY7866_RS15180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15180;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000397.1	Protein Homology	CDS	1	138	.	-	0	ID=cds-STY7866_RS15180;Parent=gene-STY7866_RS15180;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458964.1;locus_tag=STY7866_RS15180;partial=true;product=YbaK/EbsC family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000397.1	RefSeq	gene	289	905	.	-	.	ID=gene-STY7866_RS15185;Name=fhuF;end_range=905,.;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=STY7866_RS15185;partial=true
NZ_CAAR01000397.1	Protein Homology	CDS	289	905	.	-	2	ID=cds-WP_000304248.1;Parent=gene-STY7866_RS15185;Dbxref=Genbank:WP_000304248.1;Name=WP_000304248.1;end_range=905,.;gbkey=CDS;gene=fhuF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458965.1;locus_tag=STY7866_RS15185;partial=true;product=siderophore-iron reductase FhuF;protein_id=WP_000304248.1;transl_table=11
##sequence-region NZ_CAAR01000396.1 1 4479
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000396.1	RefSeq	region	1	4479	.	+	.	ID=NZ_CAAR01000396.1:1..4479;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000396.1	RefSeq	gene	1	2765	.	+	.	ID=gene-STY7866_RS15170;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=STY7866_RS15170;partial=true;start_range=.,1
NZ_CAAR01000396.1	Protein Homology	CDS	1	2765	.	+	2	ID=cds-WP_001184449.1;Parent=gene-STY7866_RS15170;Dbxref=Genbank:WP_001184449.1;Name=WP_001184449.1;gbkey=CDS;gene=rpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457917.1;locus_tag=STY7866_RS15170;partial=true;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_001184449.1;start_range=.,1;transl_table=11
NZ_CAAR01000396.1	RefSeq	pseudogene	2842	4479	.	+	.	ID=gene-STY7866_RS15175;Name=STY7866_RS15175;end_range=4479,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15175;partial=true;pseudo=true
NZ_CAAR01000396.1	Protein Homology	CDS	2842	4479	.	+	0	ID=cds-STY7866_RS15175;Parent=gene-STY7866_RS15175;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4479,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457916.1;locus_tag=STY7866_RS15175;partial=true;product=DNA-directed RNA polymerase subunit beta';pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000395.1 1 3538
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000395.1	RefSeq	region	1	3538	.	+	.	ID=NZ_CAAR01000395.1:1..3538;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000395.1	RefSeq	gene	22	372	.	+	.	ID=gene-STY7866_RS15135;Name=STY7866_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15135
NZ_CAAR01000395.1	Protein Homology	CDS	22	372	.	+	0	ID=cds-WP_000793143.1;Parent=gene-STY7866_RS15135;Dbxref=Genbank:WP_000793143.1;Name=WP_000793143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456019.1;locus_tag=STY7866_RS15135;product=membrane protein;protein_id=WP_000793143.1;transl_table=11
NZ_CAAR01000395.1	RefSeq	gene	375	1103	.	+	.	ID=gene-STY7866_RS15140;Name=STY7866_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15140
NZ_CAAR01000395.1	Protein Homology	CDS	375	1103	.	+	0	ID=cds-WP_001104432.1;Parent=gene-STY7866_RS15140;Dbxref=Genbank:WP_001104432.1;Name=WP_001104432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001104436.1;locus_tag=STY7866_RS15140;product=transglycosylase SLT domain-containing protein;protein_id=WP_001104432.1;transl_table=11
NZ_CAAR01000395.1	RefSeq	gene	1087	1737	.	+	.	ID=gene-STY7866_RS15145;Name=STY7866_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15145
NZ_CAAR01000395.1	Protein Homology	CDS	1087	1737	.	+	0	ID=cds-WP_000264664.1;Parent=gene-STY7866_RS15145;Dbxref=Genbank:WP_000264664.1;Name=WP_000264664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456022.1;locus_tag=STY7866_RS15145;product=lipoprotein;protein_id=WP_000264664.1;transl_table=11
NZ_CAAR01000395.1	RefSeq	gene	1734	2060	.	+	.	ID=gene-STY7866_RS15150;Name=STY7866_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15150
NZ_CAAR01000395.1	Protein Homology	CDS	1734	2060	.	+	0	ID=cds-WP_000175097.1;Parent=gene-STY7866_RS15150;Dbxref=Genbank:WP_000175097.1;Name=WP_000175097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175095.1;locus_tag=STY7866_RS15150;product=membrane protein;protein_id=WP_000175097.1;transl_table=11
NZ_CAAR01000395.1	RefSeq	gene	2060	2371	.	+	.	ID=gene-STY7866_RS15155;Name=STY7866_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15155
NZ_CAAR01000395.1	Protein Homology	CDS	2060	2371	.	+	0	ID=cds-WP_000227700.1;Parent=gene-STY7866_RS15155;Dbxref=Genbank:WP_000227700.1;Name=WP_000227700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456024.1;locus_tag=STY7866_RS15155;product=hypothetical protein;protein_id=WP_000227700.1;transl_table=11
NZ_CAAR01000395.1	RefSeq	gene	2371	2916	.	+	.	ID=gene-STY7866_RS15160;Name=STY7866_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15160
NZ_CAAR01000395.1	Protein Homology	CDS	2371	2916	.	+	0	ID=cds-WP_000124060.1;Parent=gene-STY7866_RS15160;Dbxref=Genbank:WP_000124060.1;Name=WP_000124060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456025.1;locus_tag=STY7866_RS15160;product=DUF3486 family protein;protein_id=WP_000124060.1;transl_table=11
NZ_CAAR01000395.1	RefSeq	pseudogene	2913	3538	.	+	.	ID=gene-STY7866_RS15165;Name=STY7866_RS15165;end_range=3538,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15165;partial=true;pseudo=true
NZ_CAAR01000395.1	Protein Homology	CDS	2913	3538	.	+	0	ID=cds-STY7866_RS15165;Parent=gene-STY7866_RS15165;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3538,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456026.1;locus_tag=STY7866_RS15165;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000394.1 1 7734
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000394.1	RefSeq	region	1	7734	.	+	.	ID=NZ_CAAR01000394.1:1..7734;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000394.1	RefSeq	pseudogene	1	362	.	+	.	ID=gene-STY7866_RS15090;Name=STY7866_RS15090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15090;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000394.1	Protein Homology	CDS	1	362	.	+	2	ID=cds-STY7866_RS15090;Parent=gene-STY7866_RS15090;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454926.1;locus_tag=STY7866_RS15090;partial=true;product=RNA ligase RtcB family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000394.1	RefSeq	gene	359	973	.	+	.	ID=gene-STY7866_RS15095;Name=STY7866_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15095
NZ_CAAR01000394.1	Protein Homology	CDS	359	973	.	+	0	ID=cds-WP_000602086.1;Parent=gene-STY7866_RS15095;Dbxref=Genbank:WP_000602086.1;Name=WP_000602086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454927.1;locus_tag=STY7866_RS15095;product=peptide chain release factor H;protein_id=WP_000602086.1;transl_table=11
NZ_CAAR01000394.1	RefSeq	gene	1128	2585	.	-	.	ID=gene-STY7866_RS15100;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=STY7866_RS15100
NZ_CAAR01000394.1	Protein Homology	CDS	1128	2585	.	-	0	ID=cds-WP_001292984.1;Parent=gene-STY7866_RS15100;Dbxref=Genbank:WP_001292984.1;Name=WP_001292984.1;gbkey=CDS;gene=pepD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008783788.1;locus_tag=STY7866_RS15100;product=cytosol nonspecific dipeptidase;protein_id=WP_001292984.1;transl_table=11
NZ_CAAR01000394.1	RefSeq	gene	2834	3292	.	+	.	ID=gene-STY7866_RS15105;Name=STY7866_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15105
NZ_CAAR01000394.1	Protein Homology	CDS	2834	3292	.	+	0	ID=cds-WP_001292018.1;Parent=gene-STY7866_RS15105;Dbxref=Genbank:WP_001292018.1;Name=WP_001292018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454929.1;locus_tag=STY7866_RS15105;product=xanthine phosphoribosyltransferase;protein_id=WP_001292018.1;transl_table=11
NZ_CAAR01000394.1	RefSeq	gene	3381	4625	.	+	.	ID=gene-STY7866_RS15110;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=STY7866_RS15110
NZ_CAAR01000394.1	Protein Homology	CDS	3381	4625	.	+	0	ID=cds-WP_000189584.1;Parent=gene-STY7866_RS15110;Dbxref=Genbank:WP_000189584.1;Name=WP_000189584.1;gbkey=CDS;gene=frsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454930.1;locus_tag=STY7866_RS15110;product=esterase FrsA;protein_id=WP_000189584.1;transl_table=11
NZ_CAAR01000394.1	RefSeq	pseudogene	4683	5085	.	+	.	ID=gene-STY7866_RS15115;Name=STY7866_RS15115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15115;pseudo=true
NZ_CAAR01000394.1	Protein Homology	CDS	4683	5085	.	+	0	ID=cds-STY7866_RS15115;Parent=gene-STY7866_RS15115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454931.1;locus_tag=STY7866_RS15115;product=sigma factor-binding protein Crl;pseudo=true;transl_table=11
NZ_CAAR01000394.1	RefSeq	gene	5136	6188	.	-	.	ID=gene-STY7866_RS15120;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=STY7866_RS15120
NZ_CAAR01000394.1	Protein Homology	CDS	5136	6188	.	-	0	ID=cds-WP_001043666.1;Parent=gene-STY7866_RS15120;Dbxref=Genbank:WP_001043666.1;Name=WP_001043666.1;gbkey=CDS;gene=phoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454932.1;locus_tag=STY7866_RS15120;product=phosphoporin PhoE;protein_id=WP_001043666.1;transl_table=11
NZ_CAAR01000394.1	RefSeq	gene	6470	7573	.	+	.	ID=gene-STY7866_RS15125;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=STY7866_RS15125
NZ_CAAR01000394.1	Protein Homology	CDS	6470	7573	.	+	0	ID=cds-WP_001285275.1;Parent=gene-STY7866_RS15125;Dbxref=Genbank:WP_001285275.1;Name=WP_001285275.1;gbkey=CDS;gene=proB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454933.1;locus_tag=STY7866_RS15125;product=glutamate 5-kinase;protein_id=WP_001285275.1;transl_table=11
NZ_CAAR01000394.1	RefSeq	pseudogene	7585	7734	.	+	.	ID=gene-STY7866_RS27490;Name=STY7866_RS27490;end_range=7734,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27490;partial=true;pseudo=true
NZ_CAAR01000394.1	Protein Homology	CDS	7585	7734	.	+	0	ID=cds-STY7866_RS27490;Parent=gene-STY7866_RS27490;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7734,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454934.1;locus_tag=STY7866_RS27490;partial=true;product=gamma-glutamyl-phosphate reductase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000393.1 1 8316
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000393.1	RefSeq	region	1	8316	.	+	.	ID=NZ_CAAR01000393.1:1..8316;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000393.1	RefSeq	gene	39	1442	.	+	.	ID=gene-STY7866_RS15055;Name=STY7866_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15055
NZ_CAAR01000393.1	Protein Homology	CDS	39	1442	.	+	0	ID=cds-WP_001075634.1;Parent=gene-STY7866_RS15055;Dbxref=Genbank:WP_001075634.1;Name=WP_001075634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456998.1;locus_tag=STY7866_RS15055;product=aldehyde dehydrogenase EutE;protein_id=WP_001075634.1;transl_table=11
NZ_CAAR01000393.1	RefSeq	gene	1453	2292	.	+	.	ID=gene-STY7866_RS15060;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=STY7866_RS15060
NZ_CAAR01000393.1	Protein Homology	CDS	1453	2292	.	+	0	ID=cds-WP_000929675.1;Parent=gene-STY7866_RS15060;Dbxref=Genbank:WP_000929675.1;Name=WP_000929675.1;gbkey=CDS;gene=eutJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456997.1;locus_tag=STY7866_RS15060;product=ethanolamine utilization protein EutJ;protein_id=WP_000929675.1;transl_table=11
NZ_CAAR01000393.1	RefSeq	gene	2282	3469	.	+	.	ID=gene-STY7866_RS15065;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=STY7866_RS15065
NZ_CAAR01000393.1	Protein Homology	CDS	2282	3469	.	+	0	ID=cds-WP_001147519.1;Parent=gene-STY7866_RS15065;Dbxref=Genbank:WP_001147519.1;Name=WP_001147519.1;gbkey=CDS;gene=eutG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456996.1;locus_tag=STY7866_RS15065;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001147519.1;transl_table=11
NZ_CAAR01000393.1	RefSeq	gene	3588	4814	.	+	.	ID=gene-STY7866_RS15070;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=STY7866_RS15070
NZ_CAAR01000393.1	Protein Homology	CDS	3588	4814	.	+	0	ID=cds-WP_000512362.1;Parent=gene-STY7866_RS15070;Dbxref=Genbank:WP_000512362.1;Name=WP_000512362.1;gbkey=CDS;gene=eutH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456995.1;locus_tag=STY7866_RS15070;product=ethanolamine utilization protein EutH;protein_id=WP_000512362.1;transl_table=11
NZ_CAAR01000393.1	RefSeq	gene	4811	6214	.	+	.	ID=gene-STY7866_RS15075;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=STY7866_RS15075
NZ_CAAR01000393.1	Protein Homology	CDS	4811	6214	.	+	0	ID=cds-WP_001097523.1;Parent=gene-STY7866_RS15075;Dbxref=Genbank:WP_001097523.1;Name=WP_001097523.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456994.1;locus_tag=STY7866_RS15075;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_001097523.1;transl_table=11
NZ_CAAR01000393.1	RefSeq	gene	6226	7587	.	+	.	ID=gene-STY7866_RS15080;Name=STY7866_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15080
NZ_CAAR01000393.1	Protein Homology	CDS	6226	7587	.	+	0	ID=cds-WP_000769994.1;Parent=gene-STY7866_RS15080;Dbxref=Genbank:WP_000769994.1;Name=WP_000769994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456993.1;locus_tag=STY7866_RS15080;product=ethanolamine ammonia-lyase subunit EutB;protein_id=WP_000769994.1;transl_table=11
NZ_CAAR01000393.1	RefSeq	gene	7606	8316	.	+	.	ID=gene-STY7866_RS15085;Name=STY7866_RS15085;end_range=8316,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15085;partial=true
NZ_CAAR01000393.1	Protein Homology	CDS	7606	8316	.	+	0	ID=cds-WP_000372350.1;Parent=gene-STY7866_RS15085;Dbxref=Genbank:WP_000372350.1;Name=WP_000372350.1;end_range=8316,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456992.1;locus_tag=STY7866_RS15085;partial=true;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_000372350.1;transl_table=11
##sequence-region NZ_CAAR01000392.1 1 7211
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000392.1	RefSeq	region	1	7211	.	+	.	ID=NZ_CAAR01000392.1:1..7211;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000392.1	RefSeq	gene	1	243	.	+	.	ID=gene-STY7866_RS15025;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=STY7866_RS15025;partial=true;start_range=.,1
NZ_CAAR01000392.1	Protein Homology	CDS	1	243	.	+	0	ID=cds-WP_000496918.1;Parent=gene-STY7866_RS15025;Dbxref=Genbank:WP_000496918.1;Name=WP_000496918.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458586.1;locus_tag=STY7866_RS15025;partial=true;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_000496918.1;start_range=.,1;transl_table=11
NZ_CAAR01000392.1	RefSeq	gene	501	1409	.	+	.	ID=gene-STY7866_RS15030;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=STY7866_RS15030
NZ_CAAR01000392.1	Protein Homology	CDS	501	1409	.	+	0	ID=cds-WP_000457029.1;Parent=gene-STY7866_RS15030;Dbxref=Genbank:WP_000457029.1;Name=WP_000457029.1;gbkey=CDS;gene=lpxO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458585.1;locus_tag=STY7866_RS15030;product=lipid A hydroxylase LpxO;protein_id=WP_000457029.1;transl_table=11
NZ_CAAR01000392.1	RefSeq	gene	1424	1636	.	+	.	ID=gene-STY7866_RS27485;Name=STY7866_RS27485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27485
NZ_CAAR01000392.1	Protein Homology	CDS	1424	1636	.	+	0	ID=cds-WP_100208322.1;Parent=gene-STY7866_RS27485;Dbxref=Genbank:WP_100208322.1;Name=WP_100208322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001545330.1;locus_tag=STY7866_RS27485;product=hypothetical protein;protein_id=WP_100208322.1;transl_table=11
NZ_CAAR01000392.1	RefSeq	pseudogene	1748	3893	.	+	.	ID=gene-STY7866_RS15035;Name=STY7866_RS15035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15035;pseudo=true
NZ_CAAR01000392.1	Protein Homology	CDS	1748	3893	.	+	0	ID=cds-STY7866_RS15035;Parent=gene-STY7866_RS15035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458584.1;locus_tag=STY7866_RS15035;product=formate dehydrogenase subunit alpha;pseudo=true;transl_table=11
NZ_CAAR01000392.1	RefSeq	gene	4069	4758	.	+	.	ID=gene-STY7866_RS15040;Name=STY7866_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15040
NZ_CAAR01000392.1	Protein Homology	CDS	4069	4758	.	+	0	ID=cds-WP_000803225.1;Parent=gene-STY7866_RS15040;Dbxref=Genbank:WP_000803225.1;Name=WP_000803225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458583.1;locus_tag=STY7866_RS15040;product=sel1 repeat family protein;protein_id=WP_000803225.1;transl_table=11
NZ_CAAR01000392.1	RefSeq	gene	4916	6226	.	-	.	ID=gene-STY7866_RS15045;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=STY7866_RS15045
NZ_CAAR01000392.1	Protein Homology	CDS	4916	6226	.	-	0	ID=cds-WP_000793283.1;Parent=gene-STY7866_RS15045;Dbxref=Genbank:WP_000793283.1;Name=WP_000793283.1;gbkey=CDS;gene=gltP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458582.1;locus_tag=STY7866_RS15045;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000793283.1;transl_table=11
NZ_CAAR01000392.1	RefSeq	gene	6571	7191	.	-	.	ID=gene-STY7866_RS15050;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=STY7866_RS15050
NZ_CAAR01000392.1	Protein Homology	CDS	6571	7191	.	-	0	ID=cds-WP_000083247.1;Parent=gene-STY7866_RS15050;Dbxref=Genbank:WP_000083247.1;Name=WP_000083247.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458581.1;locus_tag=STY7866_RS15050;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000083247.1;transl_table=11
##sequence-region NZ_CAAR01000391.1 1 5457
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000391.1	RefSeq	region	1	5457	.	+	.	ID=NZ_CAAR01000391.1:1..5457;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000391.1	RefSeq	gene	1	1406	.	+	.	ID=gene-STY7866_RS15015;Name=STY7866_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15015;partial=true;start_range=.,1
NZ_CAAR01000391.1	Protein Homology	CDS	1	1406	.	+	2	ID=cds-WP_000474618.1;Parent=gene-STY7866_RS15015;Dbxref=Genbank:WP_000474618.1;Name=WP_000474618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=STY7866_RS15015;partial=true;product=hypothetical protein;protein_id=WP_000474618.1;start_range=.,1;transl_table=11
NZ_CAAR01000391.1	RefSeq	pseudogene	1407	1508	.	+	.	ID=gene-STY7866_RS27480;Name=STY7866_RS27480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27480;partial=true;pseudo=true;start_range=.,1407
NZ_CAAR01000391.1	Protein Homology	CDS	1407	1508	.	+	0	ID=cds-STY7866_RS27480;Parent=gene-STY7866_RS27480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=STY7866_RS27480;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1407;transl_table=11
NZ_CAAR01000391.1	RefSeq	gene	1939	5457	.	+	.	ID=gene-STY7866_RS15020;Name=STY7866_RS15020;end_range=5457,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15020;partial=true
NZ_CAAR01000391.1	Protein Homology	CDS	1939	5457	.	+	0	ID=cds-WP_151260004.1;Parent=gene-STY7866_RS15020;Dbxref=Genbank:WP_151260004.1;Name=WP_151260004.1;Note=binds fibronectin%3B may be required for intestinal persistence;end_range=5457,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001612736.1;locus_tag=STY7866_RS15020;partial=true;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=WP_151260004.1;transl_table=11
##sequence-region NZ_CAAR01000390.1 1 5803
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000390.1	RefSeq	region	1	5803	.	+	.	ID=NZ_CAAR01000390.1:1..5803;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000390.1	RefSeq	pseudogene	71	2692	.	-	.	ID=gene-STY7866_RS14990;Name=STY7866_RS14990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14990;pseudo=true
NZ_CAAR01000390.1	Protein Homology	CDS	71	2692	.	-	0	ID=cds-STY7866_RS14990;Parent=gene-STY7866_RS14990;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=STY7866_RS14990;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11
NZ_CAAR01000390.1	RefSeq	gene	2697	3365	.	-	.	ID=gene-STY7866_RS14995;Name=STY7866_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14995
NZ_CAAR01000390.1	Protein Homology	CDS	2697	3365	.	-	0	ID=cds-WP_024151076.1;Parent=gene-STY7866_RS14995;Dbxref=Genbank:WP_024151076.1;Name=WP_024151076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001678163.1;locus_tag=STY7866_RS14995;product=fimbrial biogenesis chaperone BcfB;protein_id=WP_024151076.1;transl_table=11
NZ_CAAR01000390.1	RefSeq	gene	3483	4025	.	-	.	ID=gene-STY7866_RS15000;Name=STY7866_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15000
NZ_CAAR01000390.1	Protein Homology	CDS	3483	4025	.	-	0	ID=cds-WP_000743355.1;Parent=gene-STY7866_RS15000;Dbxref=Genbank:WP_000743355.1;Name=WP_000743355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454632.1;locus_tag=STY7866_RS15000;product=fimbrial protein BcfA;protein_id=WP_000743355.1;transl_table=11
NZ_CAAR01000390.1	RefSeq	gene	4453	5157	.	-	.	ID=gene-STY7866_RS15005;Name=STY7866_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS15005
NZ_CAAR01000390.1	Protein Homology	CDS	4453	5157	.	-	0	ID=cds-WP_000738610.1;Parent=gene-STY7866_RS15005;Dbxref=Genbank:WP_000738610.1;Name=WP_000738610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454631.1;locus_tag=STY7866_RS15005;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000738610.1;transl_table=11
NZ_CAAR01000390.1	RefSeq	pseudogene	5438	5803	.	-	.	ID=gene-STY7866_RS15010;Name=STY7866_RS15010;end_range=5803,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS15010;partial=true;pseudo=true
NZ_CAAR01000390.1	Protein Homology	CDS	5438	5803	.	-	0	ID=cds-STY7866_RS15010;Parent=gene-STY7866_RS15010;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5803,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=STY7866_RS15010;partial=true;product=chitinase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000389.1 1 848
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000389.1	RefSeq	region	1	848	.	+	.	ID=NZ_CAAR01000389.1:1..848;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000389.1	RefSeq	pseudogene	49	695	.	+	.	ID=gene-STY7866_RS14985;Name=STY7866_RS14985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14985;pseudo=true
NZ_CAAR01000389.1	Protein Homology	CDS	49	695	.	+	0	ID=cds-STY7866_RS14985;Parent=gene-STY7866_RS14985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456837.1;locus_tag=STY7866_RS14985;product=porin;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000388.1 1 5867
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000388.1	RefSeq	region	1	5867	.	+	.	ID=NZ_CAAR01000388.1:1..5867;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000388.1	RefSeq	gene	111	1493	.	+	.	ID=gene-STY7866_RS14965;Name=STY7866_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14965
NZ_CAAR01000388.1	Protein Homology	CDS	111	1493	.	+	0	ID=cds-WP_000834259.1;Parent=gene-STY7866_RS14965;Dbxref=Genbank:WP_000834259.1;Name=WP_000834259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458178.1;locus_tag=STY7866_RS14965;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834259.1;transl_table=11
NZ_CAAR01000388.1	RefSeq	gene	1505	3823	.	+	.	ID=gene-STY7866_RS14970;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=STY7866_RS14970
NZ_CAAR01000388.1	Protein Homology	CDS	1505	3823	.	+	0	ID=cds-WP_000703001.1;Parent=gene-STY7866_RS14970;Dbxref=Genbank:WP_000703001.1;Name=WP_000703001.1;gbkey=CDS;gene=yicI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458179.1;locus_tag=STY7866_RS14970;product=alpha-xylosidase;protein_id=WP_000703001.1;transl_table=11
NZ_CAAR01000388.1	RefSeq	gene	3926	5635	.	-	.	ID=gene-STY7866_RS14975;Name=STY7866_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14975
NZ_CAAR01000388.1	Protein Homology	CDS	3926	5635	.	-	0	ID=cds-WP_000766661.1;Parent=gene-STY7866_RS14975;Dbxref=Genbank:WP_000766661.1;Name=WP_000766661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458180.1;locus_tag=STY7866_RS14975;product=AsmA family protein;protein_id=WP_000766661.1;transl_table=11
##sequence-region NZ_CAAR01000387.1 1 3749
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000387.1	RefSeq	region	1	3749	.	+	.	ID=NZ_CAAR01000387.1:1..3749;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000387.1	RefSeq	pseudogene	256	677	.	+	.	ID=gene-STY7866_RS27475;Name=STY7866_RS27475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27475;partial=true;pseudo=true;start_range=.,256
NZ_CAAR01000387.1	Protein Homology	CDS	256	677	.	+	0	ID=cds-STY7866_RS27475;Parent=gene-STY7866_RS27475;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=STY7866_RS27475;partial=true;product=transposase;pseudo=true;start_range=.,256;transl_table=11
NZ_CAAR01000387.1	RefSeq	gene	750	1277	.	-	.	ID=gene-STY7866_RS14940;Name=STY7866_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14940
NZ_CAAR01000387.1	Protein Homology	CDS	750	1277	.	-	0	ID=cds-WP_000971655.1;Parent=gene-STY7866_RS14940;Dbxref=Genbank:WP_000971655.1;Name=WP_000971655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457296.1;locus_tag=STY7866_RS14940;product=GNAT family N-acetyltransferase;protein_id=WP_000971655.1;transl_table=11
NZ_CAAR01000387.1	RefSeq	gene	1274	1564	.	-	.	ID=gene-STY7866_RS14945;Name=STY7866_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14945
NZ_CAAR01000387.1	Protein Homology	CDS	1274	1564	.	-	0	ID=cds-WP_000855694.1;Parent=gene-STY7866_RS14945;Dbxref=Genbank:WP_000855694.1;Name=WP_000855694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457295.1;locus_tag=STY7866_RS14945;product=DUF1778 domain-containing protein;protein_id=WP_000855694.1;transl_table=11
NZ_CAAR01000387.1	RefSeq	pseudogene	1831	2034	.	-	.	ID=gene-STY7866_RS14950;Name=STY7866_RS14950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14950;partial=true;pseudo=true;start_range=.,1831
NZ_CAAR01000387.1	Protein Homology	CDS	1831	2034	.	-	0	ID=cds-STY7866_RS14950;Parent=gene-STY7866_RS14950;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=STY7866_RS14950;partial=true;product=transposase;pseudo=true;start_range=.,1831;transl_table=11
NZ_CAAR01000387.1	RefSeq	gene	2439	2882	.	-	.	ID=gene-STY7866_RS14955;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=STY7866_RS14955
NZ_CAAR01000387.1	Protein Homology	CDS	2439	2882	.	-	0	ID=cds-WP_000715096.1;Parent=gene-STY7866_RS14955;Dbxref=Genbank:WP_000715096.1;Name=WP_000715096.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457294.1;locus_tag=STY7866_RS14955;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WP_000715096.1;transl_table=11
NZ_CAAR01000387.1	RefSeq	pseudogene	3338	3749	.	+	.	ID=gene-STY7866_RS14960;Name=invF;end_range=3749,.;gbkey=Gene;gene=invF;gene_biotype=pseudogene;locus_tag=STY7866_RS14960;partial=true;pseudo=true
NZ_CAAR01000387.1	Protein Homology	CDS	3338	3749	.	+	0	ID=cds-STY7866_RS14960;Parent=gene-STY7866_RS14960;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3749,.;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457293.1;locus_tag=STY7866_RS14960;partial=true;product=AraC family transcriptional regulator InvF;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000386.1 1 2631
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000386.1	RefSeq	region	1	2631	.	+	.	ID=NZ_CAAR01000386.1:1..2631;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000386.1	RefSeq	gene	1	1952	.	+	.	ID=gene-STY7866_RS14920;Name=STY7866_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14920;partial=true;start_range=.,1
NZ_CAAR01000386.1	Protein Homology	CDS	1	1952	.	+	2	ID=cds-WP_000541965.1;Parent=gene-STY7866_RS14920;Dbxref=Genbank:WP_000541965.1;Name=WP_000541965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458309.1;locus_tag=STY7866_RS14920;partial=true;product=AsmA family protein;protein_id=WP_000541965.1;start_range=.,1;transl_table=11
NZ_CAAR01000386.1	RefSeq	gene	1992	2631	.	-	.	ID=gene-STY7866_RS14925;Name=STY7866_RS14925;end_range=2631,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14925;partial=true
NZ_CAAR01000386.1	Protein Homology	CDS	1992	2631	.	-	1	ID=cds-WP_000000071.1;Parent=gene-STY7866_RS14925;Dbxref=Genbank:WP_000000071.1;Name=WP_000000071.1;end_range=2631,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458310.1;locus_tag=STY7866_RS14925;partial=true;product=MFS transporter;protein_id=WP_000000071.1;transl_table=11
##sequence-region NZ_CAAR01000385.1 1 10152
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000385.1	RefSeq	region	1	10152	.	+	.	ID=NZ_CAAR01000385.1:1..10152;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000385.1	RefSeq	pseudogene	1	267	.	-	.	ID=gene-STY7866_RS14880;Name=galF;gbkey=Gene;gene=galF;gene_biotype=pseudogene;locus_tag=STY7866_RS14880;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000385.1	Protein Homology	CDS	1	267	.	-	0	ID=cds-STY7866_RS14880;Parent=gene-STY7866_RS14880;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=galF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456647.1;locus_tag=STY7866_RS14880;partial=true;product=UTP--glucose-1-phosphate uridylyltransferase GalF;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000385.1	RefSeq	gene	445	1848	.	-	.	ID=gene-STY7866_RS14885;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=STY7866_RS14885
NZ_CAAR01000385.1	Protein Homology	CDS	445	1848	.	-	0	ID=cds-WP_001111854.1;Parent=gene-STY7866_RS14885;Dbxref=Genbank:WP_001111854.1;Name=WP_001111854.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456648.1;locus_tag=STY7866_RS14885;product=colanic acid biosynthesis protein WcaM;protein_id=WP_001111854.1;transl_table=11
NZ_CAAR01000385.1	RefSeq	gene	1859	3079	.	-	.	ID=gene-STY7866_RS14890;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=STY7866_RS14890
NZ_CAAR01000385.1	Protein Homology	CDS	1859	3079	.	-	0	ID=cds-WP_000868506.1;Parent=gene-STY7866_RS14890;Dbxref=Genbank:WP_000868506.1;Name=WP_000868506.1;gbkey=CDS;gene=wcaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456649.1;locus_tag=STY7866_RS14890;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_000868506.1;transl_table=11
NZ_CAAR01000385.1	RefSeq	pseudogene	3076	4354	.	-	.	ID=gene-STY7866_RS14895;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=pseudogene;locus_tag=STY7866_RS14895;pseudo=true
NZ_CAAR01000385.1	Protein Homology	CDS	3076	4354	.	-	0	ID=cds-STY7866_RS14895;Parent=gene-STY7866_RS14895;Note=frameshifted%3B internal stop;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=STY7866_RS14895;product=colanic acid biosynthesis pyruvyl transferase WcaK;pseudo=true;transl_table=11
NZ_CAAR01000385.1	RefSeq	gene	4376	5854	.	-	.	ID=gene-STY7866_RS14900;Name=STY7866_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14900
NZ_CAAR01000385.1	Protein Homology	CDS	4376	5854	.	-	0	ID=cds-WP_000058696.1;Parent=gene-STY7866_RS14900;Dbxref=Genbank:WP_000058696.1;Name=WP_000058696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456650.1;locus_tag=STY7866_RS14900;product=MOP flippase family protein;protein_id=WP_000058696.1;transl_table=11
NZ_CAAR01000385.1	RefSeq	gene	5956	7350	.	-	.	ID=gene-STY7866_RS14905;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=STY7866_RS14905
NZ_CAAR01000385.1	Protein Homology	CDS	5956	7350	.	-	0	ID=cds-WP_000183160.1;Parent=gene-STY7866_RS14905;Dbxref=Genbank:WP_000183160.1;Name=WP_000183160.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456651.1;locus_tag=STY7866_RS14905;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_000183160.1;transl_table=11
NZ_CAAR01000385.1	RefSeq	gene	7404	8774	.	-	.	ID=gene-STY7866_RS14910;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;locus_tag=STY7866_RS14910
NZ_CAAR01000385.1	Protein Homology	CDS	7404	8774	.	-	0	ID=cds-WP_000164210.1;Parent=gene-STY7866_RS14910;Dbxref=Genbank:WP_000164210.1;Name=WP_000164210.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456652.1;locus_tag=STY7866_RS14910;product=phosphomannomutase CpsG;protein_id=WP_000164210.1;transl_table=11
NZ_CAAR01000385.1	RefSeq	gene	8885	10152	.	-	.	ID=gene-STY7866_RS14915;Name=cpsB;end_range=10152,.;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=STY7866_RS14915;partial=true
NZ_CAAR01000385.1	Protein Homology	CDS	8885	10152	.	-	2	ID=cds-WP_000321860.1;Parent=gene-STY7866_RS14915;Dbxref=Genbank:WP_000321860.1;Name=WP_000321860.1;end_range=10152,.;gbkey=CDS;gene=cpsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456653.1;locus_tag=STY7866_RS14915;partial=true;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000321860.1;transl_table=11
##sequence-region NZ_CAAR01000384.1 1 8090
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000384.1	RefSeq	region	1	8090	.	+	.	ID=NZ_CAAR01000384.1:1..8090;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000384.1	RefSeq	gene	505	900	.	-	.	ID=gene-STY7866_RS14840;Name=STY7866_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14840
NZ_CAAR01000384.1	Protein Homology	CDS	505	900	.	-	0	ID=cds-WP_000422884.1;Parent=gene-STY7866_RS14840;Dbxref=Genbank:WP_000422884.1;Name=WP_000422884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456360.1;locus_tag=STY7866_RS14840;product=DUF1398 domain-containing protein;protein_id=WP_000422884.1;transl_table=11
NZ_CAAR01000384.1	RefSeq	pseudogene	1584	2305	.	+	.	ID=gene-STY7866_RS14845;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=pseudogene;locus_tag=STY7866_RS14845;pseudo=true
NZ_CAAR01000384.1	Protein Homology	CDS	1584	2305	.	+	0	ID=cds-STY7866_RS14845;Parent=gene-STY7866_RS14845;Note=frameshifted;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=STY7866_RS14845;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;pseudo=true;transl_table=11
NZ_CAAR01000384.1	RefSeq	pseudogene	2590	2753	.	+	.	ID=gene-STY7866_RS14850;Name=STY7866_RS14850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14850;pseudo=true
NZ_CAAR01000384.1	Protein Homology	CDS	2590	2753	.	+	0	ID=cds-STY7866_RS14850;Parent=gene-STY7866_RS14850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=STY7866_RS14850;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000384.1	RefSeq	gene	2977	3627	.	+	.	ID=gene-STY7866_RS14855;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=STY7866_RS14855
NZ_CAAR01000384.1	Protein Homology	CDS	2977	3627	.	+	0	ID=cds-WP_000986169.1;Parent=gene-STY7866_RS14855;Dbxref=Genbank:WP_000986169.1;Name=WP_000986169.1;gbkey=CDS;gene=pphA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456358.1;locus_tag=STY7866_RS14855;product=protein-serine/threonine phosphatase;protein_id=WP_000986169.1;transl_table=11
NZ_CAAR01000384.1	RefSeq	gene	3646	3837	.	-	.	ID=gene-STY7866_RS14860;Name=STY7866_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14860
NZ_CAAR01000384.1	Protein Homology	CDS	3646	3837	.	-	0	ID=cds-WP_000457838.1;Parent=gene-STY7866_RS14860;Dbxref=Genbank:WP_000457838.1;Name=WP_000457838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456357.1;locus_tag=STY7866_RS14860;product=YebW family protein;protein_id=WP_000457838.1;transl_table=11
NZ_CAAR01000384.1	RefSeq	gene	3948	4187	.	-	.	ID=gene-STY7866_RS14865;Name=STY7866_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14865
NZ_CAAR01000384.1	Protein Homology	CDS	3948	4187	.	-	0	ID=cds-WP_000978523.1;Parent=gene-STY7866_RS14865;Dbxref=Genbank:WP_000978523.1;Name=WP_000978523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456356.1;locus_tag=STY7866_RS14865;product=YebV family protein;protein_id=WP_000978523.1;transl_table=11
NZ_CAAR01000384.1	RefSeq	gene	4302	5741	.	-	.	ID=gene-STY7866_RS14870;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=STY7866_RS14870
NZ_CAAR01000384.1	Protein Homology	CDS	4302	5741	.	-	0	ID=cds-WP_010989184.1;Parent=gene-STY7866_RS14870;Dbxref=Genbank:WP_010989184.1;Name=WP_010989184.1;gbkey=CDS;gene=rsmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456355.1;locus_tag=STY7866_RS14870;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_010989184.1;transl_table=11
NZ_CAAR01000384.1	RefSeq	gene	5819	8090	.	-	.	ID=gene-STY7866_RS14875;Name=STY7866_RS14875;end_range=8090,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14875;partial=true
NZ_CAAR01000384.1	Protein Homology	CDS	5819	8090	.	-	1	ID=cds-WP_000452896.1;Parent=gene-STY7866_RS14875;Dbxref=Genbank:WP_000452896.1;Name=WP_000452896.1;end_range=8090,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456354.1;locus_tag=STY7866_RS14875;partial=true;product=MCE family protein;protein_id=WP_000452896.1;transl_table=11
##sequence-region NZ_CAAR01000383.1 1 3609
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000383.1	RefSeq	region	1	3609	.	+	.	ID=NZ_CAAR01000383.1:1..3609;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000383.1	RefSeq	gene	1	590	.	-	.	ID=gene-STY7866_RS14815;Name=STY7866_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14815;partial=true;start_range=.,1
NZ_CAAR01000383.1	Protein Homology	CDS	1	590	.	-	0	ID=cds-WP_000569164.1;Parent=gene-STY7866_RS14815;Dbxref=Genbank:WP_000569164.1;Name=WP_000569164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456723.1;locus_tag=STY7866_RS14815;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_000569164.1;start_range=.,1;transl_table=11
NZ_CAAR01000383.1	RefSeq	gene	583	1752	.	-	.	ID=gene-STY7866_RS14820;Name=STY7866_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14820
NZ_CAAR01000383.1	Protein Homology	CDS	583	1752	.	-	0	ID=cds-WP_001278103.1;Parent=gene-STY7866_RS14820;Dbxref=Genbank:WP_001278103.1;Name=WP_001278103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456724.1;locus_tag=STY7866_RS14820;product=ABC transporter permease;protein_id=WP_001278103.1;transl_table=11
NZ_CAAR01000383.1	RefSeq	gene	1756	2673	.	-	.	ID=gene-STY7866_RS14825;Name=STY7866_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14825
NZ_CAAR01000383.1	Protein Homology	CDS	1756	2673	.	-	0	ID=cds-WP_000155871.1;Parent=gene-STY7866_RS14825;Dbxref=Genbank:WP_000155871.1;Name=WP_000155871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456725.1;locus_tag=STY7866_RS14825;product=ABC transporter substrate-binding protein;protein_id=WP_000155871.1;transl_table=11
NZ_CAAR01000383.1	RefSeq	pseudogene	2854	3609	.	-	.	ID=gene-STY7866_RS14830;Name=STY7866_RS14830;end_range=3609,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14830;partial=true;pseudo=true
NZ_CAAR01000383.1	Protein Homology	CDS	2854	3609	.	-	0	ID=cds-STY7866_RS14830;Parent=gene-STY7866_RS14830;Note=catalyzes the hydrolysis of terminal beta-D-glucosyl residues%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3609,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456726.1;locus_tag=STY7866_RS14830;partial=true;product=beta-glucosidase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000382.1 1 10666
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000382.1	RefSeq	region	1	10666	.	+	.	ID=NZ_CAAR01000382.1:1..10666;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000382.1	RefSeq	gene	1	1398	.	-	.	ID=gene-STY7866_RS14760;Name=STY7866_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14760
NZ_CAAR01000382.1	Protein Homology	CDS	1	1398	.	-	0	ID=cds-WP_000132306.1;Parent=gene-STY7866_RS14760;Dbxref=Genbank:WP_000132306.1;Name=WP_000132306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456902.1;locus_tag=STY7866_RS14760;product=diaminopimelate decarboxylase;protein_id=WP_000132306.1;transl_table=11
NZ_CAAR01000382.1	RefSeq	gene	1609	3036	.	+	.	ID=gene-STY7866_RS14765;Name=STY7866_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14765
NZ_CAAR01000382.1	Protein Homology	CDS	1609	3036	.	+	0	ID=cds-WP_000168932.1;Parent=gene-STY7866_RS14765;Dbxref=Genbank:WP_000168932.1;Name=WP_000168932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456903.1;locus_tag=STY7866_RS14765;product=sigma-54-dependent transcriptional regulator;protein_id=WP_000168932.1;transl_table=11
NZ_CAAR01000382.1	RefSeq	gene	3072	4589	.	-	.	ID=gene-STY7866_RS14770;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=STY7866_RS14770
NZ_CAAR01000382.1	Protein Homology	CDS	3072	4589	.	-	0	ID=cds-WP_000334231.1;Parent=gene-STY7866_RS14770;Dbxref=Genbank:WP_000334231.1;Name=WP_000334231.1;gbkey=CDS;gene=purF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=STY7866_RS14770;product=amidophosphoribosyltransferase;protein_id=WP_000334231.1;transl_table=11
NZ_CAAR01000382.1	RefSeq	pseudogene	4627	5114	.	-	.	ID=gene-STY7866_RS14775;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=pseudogene;locus_tag=STY7866_RS14775;pseudo=true
NZ_CAAR01000382.1	Protein Homology	CDS	4627	5114	.	-	0	ID=cds-STY7866_RS14775;Parent=gene-STY7866_RS14775;Note=frameshifted;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456905.1;locus_tag=STY7866_RS14775;product=colicin V production protein;pseudo=true;transl_table=11
NZ_CAAR01000382.1	RefSeq	pseudogene	5425	6098	.	-	.	ID=gene-STY7866_RS14785;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=pseudogene;locus_tag=STY7866_RS14785;pseudo=true
NZ_CAAR01000382.1	Protein Homology	CDS	5425	6098	.	-	0	ID=cds-STY7866_RS14785;Parent=gene-STY7866_RS14785;Note=frameshifted;gbkey=CDS;gene=dedD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456906.1;locus_tag=STY7866_RS14785;product=cell division protein DedD;pseudo=true;transl_table=11
NZ_CAAR01000382.1	RefSeq	gene	6088	7356	.	-	.	ID=gene-STY7866_RS14790;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=STY7866_RS14790
NZ_CAAR01000382.1	Protein Homology	CDS	6088	7356	.	-	0	ID=cds-WP_000792271.1;Parent=gene-STY7866_RS14790;Dbxref=Genbank:WP_000792271.1;Name=WP_000792271.1;gbkey=CDS;gene=folC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456907.1;locus_tag=STY7866_RS14790;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_000792271.1;transl_table=11
NZ_CAAR01000382.1	RefSeq	gene	7424	8338	.	-	.	ID=gene-STY7866_RS14795;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=STY7866_RS14795
NZ_CAAR01000382.1	Protein Homology	CDS	7424	8338	.	-	0	ID=cds-WP_000118383.1;Parent=gene-STY7866_RS14795;Dbxref=Genbank:WP_000118383.1;Name=WP_000118383.1;gbkey=CDS;gene=accD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456908.1;locus_tag=STY7866_RS14795;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118383.1;transl_table=11
NZ_CAAR01000382.1	RefSeq	gene	8488	9147	.	-	.	ID=gene-STY7866_RS14800;Name=STY7866_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14800
NZ_CAAR01000382.1	Protein Homology	CDS	8488	9147	.	-	0	ID=cds-WP_000364316.1;Parent=gene-STY7866_RS14800;Dbxref=Genbank:WP_000364316.1;Name=WP_000364316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456909.1;locus_tag=STY7866_RS14800;product=DedA family protein;protein_id=WP_000364316.1;transl_table=11
NZ_CAAR01000382.1	RefSeq	gene	9196	10008	.	-	.	ID=gene-STY7866_RS14805;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=STY7866_RS14805
NZ_CAAR01000382.1	Protein Homology	CDS	9196	10008	.	-	0	ID=cds-WP_000016631.1;Parent=gene-STY7866_RS14805;Dbxref=Genbank:WP_000016631.1;Name=WP_000016631.1;gbkey=CDS;gene=truA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456910.1;locus_tag=STY7866_RS14805;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_000016631.1;transl_table=11
NZ_CAAR01000382.1	RefSeq	gene	10008	10666	.	-	.	ID=gene-STY7866_RS14810;Name=STY7866_RS14810;end_range=10666,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14810;partial=true
NZ_CAAR01000382.1	Protein Homology	CDS	10008	10666	.	-	2	ID=cds-WP_000223980.1;Parent=gene-STY7866_RS14810;Dbxref=Genbank:WP_000223980.1;Name=WP_000223980.1;end_range=10666,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456911.1;locus_tag=STY7866_RS14810;partial=true;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000223980.1;transl_table=11
##sequence-region NZ_CAAR01000381.1 1 6216
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000381.1	RefSeq	region	1	6216	.	+	.	ID=NZ_CAAR01000381.1:1..6216;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000381.1	RefSeq	pseudogene	1	80	.	-	.	ID=gene-STY7866_RS27465;Name=STY7866_RS27465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27465;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000381.1	Protein Homology	CDS	1	80	.	-	0	ID=cds-STY7866_RS27465;Parent=gene-STY7866_RS27465;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000082599.1;locus_tag=STY7866_RS27465;partial=true;product=Rha family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000381.1	RefSeq	pseudogene	1006	2627	.	-	.	ID=gene-STY7866_RS14730;Name=STY7866_RS14730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14730;pseudo=true
NZ_CAAR01000381.1	Protein Homology	CDS	1006	2627	.	-	0	ID=cds-STY7866_RS14730;Parent=gene-STY7866_RS14730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004149745.1;locus_tag=STY7866_RS14730;product=site-specific integrase;pseudo=true;transl_table=11
NZ_CAAR01000381.1	RefSeq	gene	2762	2835	.	-	.	ID=gene-STY7866_RS14735;Name=STY7866_RS14735;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS14735
NZ_CAAR01000381.1	tRNAscan-SE	tRNA	2762	2835	.	-	.	ID=rna-STY7866_RS14735;Parent=gene-STY7866_RS14735;anticodon=(pos:complement(2801..2803));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS14735;product=tRNA-Gly
NZ_CAAR01000381.1	tRNAscan-SE	exon	2762	2835	.	-	.	ID=exon-STY7866_RS14735-1;Parent=rna-STY7866_RS14735;anticodon=(pos:complement(2801..2803));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS14735;product=tRNA-Gly
NZ_CAAR01000381.1	RefSeq	gene	2915	3673	.	-	.	ID=gene-STY7866_RS14740;Name=STY7866_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14740
NZ_CAAR01000381.1	Protein Homology	CDS	2915	3673	.	-	0	ID=cds-WP_000244327.1;Parent=gene-STY7866_RS14740;Dbxref=Genbank:WP_000244327.1;Name=WP_000244327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=STY7866_RS14740;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_000244327.1;transl_table=11
NZ_CAAR01000381.1	RefSeq	gene	3938	4483	.	+	.	ID=gene-STY7866_RS14745;Name=STY7866_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14745
NZ_CAAR01000381.1	Protein Homology	CDS	3938	4483	.	+	0	ID=cds-WP_000133997.1;Parent=gene-STY7866_RS14745;Dbxref=Genbank:WP_000133997.1;Name=WP_000133997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457437.1;locus_tag=STY7866_RS14745;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_000133997.1;transl_table=11
NZ_CAAR01000381.1	RefSeq	gene	4559	6076	.	-	.	ID=gene-STY7866_RS14750;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=STY7866_RS14750
NZ_CAAR01000381.1	Protein Homology	CDS	4559	6076	.	-	0	ID=cds-WP_000003339.1;Parent=gene-STY7866_RS14750;Dbxref=Genbank:WP_000003339.1;Name=WP_000003339.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=STY7866_RS14750;product=lysine--tRNA ligase;protein_id=WP_000003339.1;transl_table=11
NZ_CAAR01000381.1	RefSeq	pseudogene	6086	6216	.	-	.	ID=gene-STY7866_RS27470;Name=STY7866_RS27470;end_range=6216,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27470;partial=true;pseudo=true
NZ_CAAR01000381.1	Protein Homology	CDS	6086	6216	.	-	2	ID=cds-STY7866_RS27470;Parent=gene-STY7866_RS27470;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6216,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=STY7866_RS27470;partial=true;product=peptide chain release factor 2;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000380.1 1 28072
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000380.1	RefSeq	region	1	28072	.	+	.	ID=NZ_CAAR01000380.1:1..28072;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000380.1	RefSeq	gene	1	482	.	-	.	ID=gene-STY7866_RS14575;Name=STY7866_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14575;partial=true;start_range=.,1
NZ_CAAR01000380.1	Protein Homology	CDS	1	482	.	-	0	ID=cds-WP_000268439.1;Parent=gene-STY7866_RS14575;Dbxref=Genbank:WP_000268439.1;Name=WP_000268439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457555.1;locus_tag=STY7866_RS14575;partial=true;product=DedA family protein;protein_id=WP_000268439.1;start_range=.,1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	622	1809	.	-	.	ID=gene-STY7866_RS14580;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=STY7866_RS14580
NZ_CAAR01000380.1	Protein Homology	CDS	622	1809	.	-	0	ID=cds-WP_000130268.1;Parent=gene-STY7866_RS14580;Dbxref=Genbank:WP_000130268.1;Name=WP_000130268.1;gbkey=CDS;gene=metC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457554.1;locus_tag=STY7866_RS14580;product=cystathionine beta-lyase;protein_id=WP_000130268.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	2061	2795	.	+	.	ID=gene-STY7866_RS14590;Name=STY7866_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14590
NZ_CAAR01000380.1	Protein Homology	CDS	2061	2795	.	+	0	ID=cds-WP_000527859.1;Parent=gene-STY7866_RS14590;Dbxref=Genbank:WP_000527859.1;Name=WP_000527859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457552.1;locus_tag=STY7866_RS14590;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527859.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	2802	3227	.	+	.	ID=gene-STY7866_RS14595;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=STY7866_RS14595
NZ_CAAR01000380.1	Protein Homology	CDS	2802	3227	.	+	0	ID=cds-WP_001251476.1;Parent=gene-STY7866_RS14595;Dbxref=Genbank:WP_001251476.1;Name=WP_001251476.1;gbkey=CDS;gene=exbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457551.1;locus_tag=STY7866_RS14595;product=TonB system transport protein ExbD;protein_id=WP_001251476.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	3340	4224	.	-	.	ID=gene-STY7866_RS14600;Name=STY7866_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14600
NZ_CAAR01000380.1	Protein Homology	CDS	3340	4224	.	-	0	ID=cds-WP_000019040.1;Parent=gene-STY7866_RS14600;Dbxref=Genbank:WP_000019040.1;Name=WP_000019040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457550.1;locus_tag=STY7866_RS14600;product=SDR family oxidoreductase;protein_id=WP_000019040.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	4348	4752	.	-	.	ID=gene-STY7866_RS14605;Name=STY7866_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14605
NZ_CAAR01000380.1	Protein Homology	CDS	4348	4752	.	-	0	ID=cds-WP_000665657.1;Parent=gene-STY7866_RS14605;Dbxref=Genbank:WP_000665657.1;Name=WP_000665657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=STY7866_RS14605;product=hypothetical protein;protein_id=WP_000665657.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	4739	5149	.	-	.	ID=gene-STY7866_RS14610;Name=STY7866_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14610
NZ_CAAR01000380.1	Protein Homology	CDS	4739	5149	.	-	0	ID=cds-WP_000936453.1;Parent=gene-STY7866_RS14610;Dbxref=Genbank:WP_000936453.1;Name=WP_000936453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457548.1;locus_tag=STY7866_RS14610;product=hypothetical protein;protein_id=WP_000936453.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	5241	5756	.	+	.	ID=gene-STY7866_RS14615;Name=STY7866_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14615
NZ_CAAR01000380.1	Protein Homology	CDS	5241	5756	.	+	0	ID=cds-WP_000433048.1;Parent=gene-STY7866_RS14615;Dbxref=Genbank:WP_000433048.1;Name=WP_000433048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462069.1;locus_tag=STY7866_RS14615;product=hypothetical protein;protein_id=WP_000433048.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	5827	6321	.	+	.	ID=gene-STY7866_RS14620;Name=STY7866_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14620
NZ_CAAR01000380.1	Protein Homology	CDS	5827	6321	.	+	0	ID=cds-WP_000439337.1;Parent=gene-STY7866_RS14620;Dbxref=Genbank:WP_000439337.1;Name=WP_000439337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457547.1;locus_tag=STY7866_RS14620;product=TIGR00645 family protein;protein_id=WP_000439337.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	pseudogene	6628	8271	.	+	.	ID=gene-STY7866_RS14625;Name=STY7866_RS14625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14625;pseudo=true
NZ_CAAR01000380.1	Protein Homology	CDS	6628	8271	.	+	0	ID=cds-STY7866_RS14625;Parent=gene-STY7866_RS14625;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=STY7866_RS14625;product=HAMP domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	8356	8643	.	+	.	ID=gene-STY7866_RS14635;Name=STY7866_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14635
NZ_CAAR01000380.1	Protein Homology	CDS	8356	8643	.	+	0	ID=cds-WP_001059119.1;Parent=gene-STY7866_RS14635;Dbxref=Genbank:WP_001059119.1;Name=WP_001059119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457546.1;locus_tag=STY7866_RS14635;product=DUF2623 domain-containing protein;protein_id=WP_001059119.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	8833	9951	.	+	.	ID=gene-STY7866_RS14640;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=STY7866_RS14640
NZ_CAAR01000380.1	Protein Homology	CDS	8833	9951	.	+	0	ID=cds-WP_000145429.1;Parent=gene-STY7866_RS14640;Dbxref=Genbank:WP_000145429.1;Name=WP_000145429.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457545.1;locus_tag=STY7866_RS14640;product=hydrogenase 2 small subunit;protein_id=WP_000145429.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	9954	10940	.	+	.	ID=gene-STY7866_RS14645;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=STY7866_RS14645
NZ_CAAR01000380.1	Protein Homology	CDS	9954	10940	.	+	0	ID=cds-WP_001081721.1;Parent=gene-STY7866_RS14645;Dbxref=Genbank:WP_001081721.1;Name=WP_001081721.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457544.1;locus_tag=STY7866_RS14645;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081721.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	10930	12108	.	+	.	ID=gene-STY7866_RS14650;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=STY7866_RS14650
NZ_CAAR01000380.1	Protein Homology	CDS	10930	12108	.	+	0	ID=cds-WP_000017676.1;Parent=gene-STY7866_RS14650;Dbxref=Genbank:WP_000017676.1;Name=WP_000017676.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457543.1;locus_tag=STY7866_RS14650;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017676.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	12105	13808	.	+	.	ID=gene-STY7866_RS14655;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=STY7866_RS14655
NZ_CAAR01000380.1	Protein Homology	CDS	12105	13808	.	+	0	ID=cds-WP_000083046.1;Parent=gene-STY7866_RS14655;Dbxref=Genbank:WP_000083046.1;Name=WP_000083046.1;gbkey=CDS;gene=hybC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457542.1;locus_tag=STY7866_RS14655;product=hydrogenase 2 large subunit;protein_id=WP_000083046.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	13808	14302	.	+	.	ID=gene-STY7866_RS14660;Name=STY7866_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14660
NZ_CAAR01000380.1	Protein Homology	CDS	13808	14302	.	+	0	ID=cds-WP_001221964.1;Parent=gene-STY7866_RS14660;Dbxref=Genbank:WP_001221964.1;Name=WP_001221964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157468.1;locus_tag=STY7866_RS14660;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221964.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	14295	14783	.	+	.	ID=gene-STY7866_RS14665;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=STY7866_RS14665
NZ_CAAR01000380.1	Protein Homology	CDS	14295	14783	.	+	0	ID=cds-WP_000004951.1;Parent=gene-STY7866_RS14665;Dbxref=Genbank:WP_000004951.1;Name=WP_000004951.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457540.1;locus_tag=STY7866_RS14665;product=hydrogenase-2 assembly chaperone;protein_id=WP_000004951.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	14776	15117	.	+	.	ID=gene-STY7866_RS14670;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=STY7866_RS14670
NZ_CAAR01000380.1	Protein Homology	CDS	14776	15117	.	+	0	ID=cds-WP_000544945.1;Parent=gene-STY7866_RS14670;Dbxref=Genbank:WP_000544945.1;Name=WP_000544945.1;gbkey=CDS;gene=hypA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457539.1;locus_tag=STY7866_RS14670;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544945.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	15145	15393	.	+	.	ID=gene-STY7866_RS14675;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=STY7866_RS14675
NZ_CAAR01000380.1	Protein Homology	CDS	15145	15393	.	+	0	ID=cds-WP_000334887.1;Parent=gene-STY7866_RS14675;Dbxref=Genbank:WP_000334887.1;Name=WP_000334887.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457538.1;locus_tag=STY7866_RS14675;product=hydrogenase maturation factor HybG;protein_id=WP_000334887.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	15469	16521	.	+	.	ID=gene-STY7866_RS14680;Name=STY7866_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14680
NZ_CAAR01000380.1	Protein Homology	CDS	15469	16521	.	+	0	ID=cds-WP_001032011.1;Parent=gene-STY7866_RS14680;Dbxref=Genbank:WP_001032011.1;Name=WP_001032011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457537.1;locus_tag=STY7866_RS14680;product=ABC transporter substrate-binding protein;protein_id=WP_001032011.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	16521	17231	.	+	.	ID=gene-STY7866_RS14685;Name=STY7866_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14685
NZ_CAAR01000380.1	Protein Homology	CDS	16521	17231	.	+	0	ID=cds-WP_001681930.1;Parent=gene-STY7866_RS14685;Dbxref=Genbank:WP_001681930.1;Name=WP_001681930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=STY7866_RS14685;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_001681930.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	17299	18165	.	-	.	ID=gene-STY7866_RS14690;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=STY7866_RS14690
NZ_CAAR01000380.1	Protein Homology	CDS	17299	18165	.	-	0	ID=cds-WP_000774865.1;Parent=gene-STY7866_RS14690;Dbxref=Genbank:WP_000774865.1;Name=WP_000774865.1;gbkey=CDS;gene=yghU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457535.1;locus_tag=STY7866_RS14690;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_000774865.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	18392	20248	.	+	.	ID=gene-STY7866_RS14695;Name=STY7866_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14695
NZ_CAAR01000380.1	Protein Homology	CDS	18392	20248	.	+	0	ID=cds-WP_000033690.1;Parent=gene-STY7866_RS14695;Dbxref=Genbank:WP_000033690.1;Name=WP_000033690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457534.1;locus_tag=STY7866_RS14695;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_000033690.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	20918	21973	.	+	.	ID=gene-STY7866_RS14700;Name=STY7866_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14700
NZ_CAAR01000380.1	Protein Homology	CDS	20918	21973	.	+	0	ID=cds-WP_000475254.1;Parent=gene-STY7866_RS14700;Dbxref=Genbank:WP_000475254.1;Name=WP_000475254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457533.1;locus_tag=STY7866_RS14700;product=chemotaxis protein;protein_id=WP_000475254.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	22272	23684	.	-	.	ID=gene-STY7866_RS14705;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=STY7866_RS14705
NZ_CAAR01000380.1	Protein Homology	CDS	22272	23684	.	-	0	ID=cds-WP_000190176.1;Parent=gene-STY7866_RS14705;Dbxref=Genbank:WP_000190176.1;Name=WP_000190176.1;gbkey=CDS;gene=uxaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457532.1;locus_tag=STY7866_RS14705;product=glucuronate isomerase;protein_id=WP_000190176.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	23696	25168	.	-	.	ID=gene-STY7866_RS14710;Name=STY7866_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14710
NZ_CAAR01000380.1	Protein Homology	CDS	23696	25168	.	-	0	ID=cds-WP_000437132.1;Parent=gene-STY7866_RS14710;Dbxref=Genbank:WP_000437132.1;Name=WP_000437132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457531.1;locus_tag=STY7866_RS14710;product=fructuronate reductase;protein_id=WP_000437132.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	25279	26463	.	-	.	ID=gene-STY7866_RS14715;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=STY7866_RS14715
NZ_CAAR01000380.1	Protein Homology	CDS	25279	26463	.	-	0	ID=cds-WP_000815487.1;Parent=gene-STY7866_RS14715;Dbxref=Genbank:WP_000815487.1;Name=WP_000815487.1;gbkey=CDS;gene=uxuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457530.1;locus_tag=STY7866_RS14715;product=mannonate dehydratase;protein_id=WP_000815487.1;transl_table=11
NZ_CAAR01000380.1	RefSeq	gene	26868	28072	.	+	.	ID=gene-STY7866_RS14720;Name=STY7866_RS14720;end_range=28072,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14720;partial=true
NZ_CAAR01000380.1	Protein Homology	CDS	26868	28072	.	+	0	ID=cds-WP_001764284.1;Parent=gene-STY7866_RS14720;Dbxref=Genbank:WP_001764284.1;Name=WP_001764284.1;end_range=28072,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457529.1;locus_tag=STY7866_RS14720;partial=true;product=MFS transporter;protein_id=WP_001764284.1;transl_table=11
##sequence-region NZ_CAAR01000379.1 1 5869
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000379.1	RefSeq	region	1	5869	.	+	.	ID=NZ_CAAR01000379.1:1..5869;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000379.1	RefSeq	pseudogene	1	141	.	+	.	ID=gene-STY7866_RS14550;Name=STY7866_RS14550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14550;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000379.1	Protein Homology	CDS	1	141	.	+	0	ID=cds-STY7866_RS14550;Parent=gene-STY7866_RS14550;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457050.1;locus_tag=STY7866_RS14550;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000379.1	RefSeq	pseudogene	487	2679	.	+	.	ID=gene-STY7866_RS14560;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=pseudogene;locus_tag=STY7866_RS14560;pseudo=true
NZ_CAAR01000379.1	Protein Homology	CDS	487	2679	.	+	0	ID=cds-STY7866_RS14560;Parent=gene-STY7866_RS14560;Note=internal stop;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=STY7866_RS14560;product=intimin-like inverse autotransporter SinH;pseudo=true;transl_table=11
NZ_CAAR01000379.1	RefSeq	gene	2737	3702	.	+	.	ID=gene-STY7866_RS14565;Name=STY7866_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14565
NZ_CAAR01000379.1	Protein Homology	CDS	2737	3702	.	+	0	ID=cds-WP_001149068.1;Parent=gene-STY7866_RS14565;Dbxref=Genbank:WP_001149068.1;Name=WP_001149068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457049.1;locus_tag=STY7866_RS14565;product=hypothetical protein;protein_id=WP_001149068.1;transl_table=11
NZ_CAAR01000379.1	RefSeq	pseudogene	3822	5869	.	+	.	ID=gene-STY7866_RS14570;Name=STY7866_RS14570;end_range=5869,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14570;partial=true;pseudo=true
NZ_CAAR01000379.1	Protein Homology	CDS	3822	5869	.	+	0	ID=cds-STY7866_RS14570;Parent=gene-STY7866_RS14570;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5869,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457048.1;locus_tag=STY7866_RS14570;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000378.1 1 2122
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000378.1	RefSeq	region	1	2122	.	+	.	ID=NZ_CAAR01000378.1:1..2122;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000378.1	RefSeq	gene	1	873	.	+	.	ID=gene-STY7866_RS14540;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=STY7866_RS14540;partial=true;start_range=.,1
NZ_CAAR01000378.1	Protein Homology	CDS	1	873	.	+	0	ID=cds-WP_000304937.1;Parent=gene-STY7866_RS14540;Dbxref=Genbank:WP_000304937.1;Name=WP_000304937.1;gbkey=CDS;gene=lptD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454705.1;locus_tag=STY7866_RS14540;partial=true;product=LPS assembly protein LptD;protein_id=WP_000304937.1;start_range=.,1;transl_table=11
NZ_CAAR01000378.1	RefSeq	gene	927	2122	.	+	.	ID=gene-STY7866_RS14545;Name=surA;end_range=2122,.;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=STY7866_RS14545;partial=true
NZ_CAAR01000378.1	Protein Homology	CDS	927	2122	.	+	0	ID=cds-WP_001764267.1;Parent=gene-STY7866_RS14545;Dbxref=Genbank:WP_001764267.1;Name=WP_001764267.1;end_range=2122,.;gbkey=CDS;gene=surA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454704.1;locus_tag=STY7866_RS14545;partial=true;product=peptidylprolyl isomerase SurA;protein_id=WP_001764267.1;transl_table=11
##sequence-region NZ_CAAR01000377.1 1 9975
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000377.1	RefSeq	region	1	9975	.	+	.	ID=NZ_CAAR01000377.1:1..9975;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000377.1	RefSeq	pseudogene	1	139	.	-	.	ID=gene-STY7866_RS14470;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=pseudogene;gene_synonym=ttk;locus_tag=STY7866_RS14470;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000377.1	Protein Homology	CDS	1	139	.	-	0	ID=cds-STY7866_RS14470;Parent=gene-STY7866_RS14470;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=slmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=STY7866_RS14470;partial=true;product=nucleoid occlusion factor SlmA;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000377.1	RefSeq	gene	247	702	.	-	.	ID=gene-STY7866_RS14475;Name=STY7866_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14475
NZ_CAAR01000377.1	Protein Homology	CDS	247	702	.	-	0	ID=cds-WP_000717792.1;Parent=gene-STY7866_RS14475;Dbxref=Genbank:WP_000717792.1;Name=WP_000717792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458195.1;locus_tag=STY7866_RS14475;product=dUTP diphosphatase;protein_id=WP_000717792.1;transl_table=11
NZ_CAAR01000377.1	RefSeq	gene	683	1906	.	-	.	ID=gene-STY7866_RS14480;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=STY7866_RS14480
NZ_CAAR01000377.1	Protein Homology	CDS	683	1906	.	-	0	ID=cds-WP_000987259.1;Parent=gene-STY7866_RS14480;Dbxref=Genbank:WP_000987259.1;Name=WP_000987259.1;gbkey=CDS;gene=coaBC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458196.3;locus_tag=STY7866_RS14480;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000987259.1;transl_table=11
NZ_CAAR01000377.1	RefSeq	gene	2079	2744	.	+	.	ID=gene-STY7866_RS14485;Name=STY7866_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14485
NZ_CAAR01000377.1	Protein Homology	CDS	2079	2744	.	+	0	ID=cds-WP_000380129.1;Parent=gene-STY7866_RS14485;Dbxref=Genbank:WP_000380129.1;Name=WP_000380129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458197.1;locus_tag=STY7866_RS14485;product=JAB domain-containing protein;protein_id=WP_000380129.1;transl_table=11
NZ_CAAR01000377.1	RefSeq	gene	2962	3198	.	+	.	ID=gene-STY7866_RS14490;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=STY7866_RS14490
NZ_CAAR01000377.1	Protein Homology	CDS	2962	3198	.	+	0	ID=cds-WP_001519051.1;Parent=gene-STY7866_RS14490;Dbxref=Genbank:WP_001519051.1;Name=WP_001519051.1;gbkey=CDS;gene=rpmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=STY7866_RS14490;product=50S ribosomal protein L28;protein_id=WP_001519051.1;transl_table=11
NZ_CAAR01000377.1	RefSeq	gene	3219	3386	.	+	.	ID=gene-STY7866_RS14495;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=STY7866_RS14495
NZ_CAAR01000377.1	Protein Homology	CDS	3219	3386	.	+	0	ID=cds-WP_001051798.1;Parent=gene-STY7866_RS14495;Dbxref=Genbank:WP_001051798.1;Name=WP_001051798.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=STY7866_RS14495;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11
NZ_CAAR01000377.1	RefSeq	gene	3484	4293	.	+	.	ID=gene-STY7866_RS14500;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=STY7866_RS14500
NZ_CAAR01000377.1	Protein Homology	CDS	3484	4293	.	+	0	ID=cds-WP_001114515.1;Parent=gene-STY7866_RS14500;Dbxref=Genbank:WP_001114515.1;Name=WP_001114515.1;gbkey=CDS;gene=mutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458200.1;locus_tag=STY7866_RS14500;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114515.1;transl_table=11
NZ_CAAR01000377.1	RefSeq	gene	4321	4800	.	-	.	ID=gene-STY7866_RS14505;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=STY7866_RS14505
NZ_CAAR01000377.1	Protein Homology	CDS	4321	4800	.	-	0	ID=cds-WP_001171888.1;Parent=gene-STY7866_RS14505;Dbxref=Genbank:WP_001171888.1;Name=WP_001171888.1;gbkey=CDS;gene=coaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458201.1;locus_tag=STY7866_RS14505;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171888.1;transl_table=11
NZ_CAAR01000377.1	RefSeq	gene	4809	6086	.	-	.	ID=gene-STY7866_RS14510;Name=STY7866_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14510
NZ_CAAR01000377.1	Protein Homology	CDS	4809	6086	.	-	0	ID=cds-WP_000891584.1;Parent=gene-STY7866_RS14510;Dbxref=Genbank:WP_000891584.1;Name=WP_000891584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458202.1;locus_tag=STY7866_RS14510;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891584.1;transl_table=11
NZ_CAAR01000377.1	RefSeq	pseudogene	6496	7564	.	+	.	ID=gene-STY7866_RS14520;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=pseudogene;locus_tag=STY7866_RS14520;pseudo=true
NZ_CAAR01000377.1	Protein Homology	CDS	6496	7564	.	+	0	ID=cds-STY7866_RS14520;Parent=gene-STY7866_RS14520;Note=frameshifted;gbkey=CDS;gene=rfaQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=STY7866_RS14520;product=lipopolysaccharide core heptosyltransferase RfaQ;pseudo=true;transl_table=11
NZ_CAAR01000377.1	RefSeq	gene	7561	8685	.	+	.	ID=gene-STY7866_RS14525;Name=STY7866_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14525
NZ_CAAR01000377.1	Protein Homology	CDS	7561	8685	.	+	0	ID=cds-WP_001261571.1;Parent=gene-STY7866_RS14525;Dbxref=Genbank:WP_001261571.1;Name=WP_001261571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458204.1;locus_tag=STY7866_RS14525;product=glycosyltransferase family 4 protein;protein_id=WP_001261571.1;transl_table=11
NZ_CAAR01000377.1	RefSeq	gene	8678	9475	.	+	.	ID=gene-STY7866_RS14530;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=STY7866_RS14530
NZ_CAAR01000377.1	Protein Homology	CDS	8678	9475	.	+	0	ID=cds-WP_000229818.1;Parent=gene-STY7866_RS14530;Dbxref=Genbank:WP_000229818.1;Name=WP_000229818.1;gbkey=CDS;gene=rfaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458205.1;locus_tag=STY7866_RS14530;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_000229818.1;transl_table=11
NZ_CAAR01000377.1	RefSeq	pseudogene	9516	9899	.	+	.	ID=gene-STY7866_RS14535;Name=STY7866_RS14535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14535;pseudo=true
NZ_CAAR01000377.1	Protein Homology	CDS	9516	9899	.	+	0	ID=cds-STY7866_RS14535;Parent=gene-STY7866_RS14535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989266.1;locus_tag=STY7866_RS14535;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000376.1 1 6408
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000376.1	RefSeq	region	1	6408	.	+	.	ID=NZ_CAAR01000376.1:1..6408;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000376.1	RefSeq	gene	151	792	.	+	.	ID=gene-STY7866_RS14430;Name=STY7866_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14430
NZ_CAAR01000376.1	Protein Homology	CDS	151	792	.	+	0	ID=cds-WP_000800493.1;Parent=gene-STY7866_RS14430;Dbxref=Genbank:WP_000800493.1;Name=WP_000800493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991987.1;locus_tag=STY7866_RS14430;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800493.1;transl_table=11
NZ_CAAR01000376.1	RefSeq	gene	892	2070	.	-	.	ID=gene-STY7866_RS14440;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=STY7866_RS14440
NZ_CAAR01000376.1	Protein Homology	CDS	892	2070	.	-	0	ID=cds-WP_000173426.1;Parent=gene-STY7866_RS14440;Dbxref=Genbank:WP_000173426.1;Name=WP_000173426.1;gbkey=CDS;gene=purT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456451.1;locus_tag=STY7866_RS14440;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_000173426.1;transl_table=11
NZ_CAAR01000376.1	RefSeq	gene	2201	2491	.	+	.	ID=gene-STY7866_RS14445;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=STY7866_RS14445
NZ_CAAR01000376.1	Protein Homology	CDS	2201	2491	.	+	0	ID=cds-WP_000257728.1;Parent=gene-STY7866_RS14445;Dbxref=Genbank:WP_000257728.1;Name=WP_000257728.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456450.1;locus_tag=STY7866_RS14445;product=DNA damage-inducible protein YebG;protein_id=WP_000257728.1;transl_table=11
NZ_CAAR01000376.1	RefSeq	gene	2559	2912	.	+	.	ID=gene-STY7866_RS14450;Name=STY7866_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14450
NZ_CAAR01000376.1	Protein Homology	CDS	2559	2912	.	+	0	ID=cds-WP_001042123.1;Parent=gene-STY7866_RS14450;Dbxref=Genbank:WP_001042123.1;Name=WP_001042123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456449.1;locus_tag=STY7866_RS14450;product=hypothetical protein;protein_id=WP_001042123.1;transl_table=11
NZ_CAAR01000376.1	RefSeq	gene	3006	3665	.	+	.	ID=gene-STY7866_RS14455;Name=STY7866_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14455
NZ_CAAR01000376.1	Protein Homology	CDS	3006	3665	.	+	0	ID=cds-WP_000024713.1;Parent=gene-STY7866_RS14455;Dbxref=Genbank:WP_000024713.1;Name=WP_000024713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456448.1;locus_tag=STY7866_RS14455;product=tellurite resistance TerB family protein;protein_id=WP_000024713.1;transl_table=11
NZ_CAAR01000376.1	RefSeq	gene	3879	5930	.	+	.	ID=gene-STY7866_RS14460;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=STY7866_RS14460
NZ_CAAR01000376.1	Protein Homology	CDS	3879	5930	.	+	0	ID=cds-WP_000936997.1;Parent=gene-STY7866_RS14460;Dbxref=Genbank:WP_000936997.1;Name=WP_000936997.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456447.1;locus_tag=STY7866_RS14460;product=oligopeptidase B;protein_id=WP_000936997.1;transl_table=11
NZ_CAAR01000376.1	RefSeq	gene	5967	6408	.	-	.	ID=gene-STY7866_RS14465;Name=exoX;end_range=6408,.;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=STY7866_RS14465;partial=true
NZ_CAAR01000376.1	Protein Homology	CDS	5967	6408	.	-	1	ID=cds-WP_000308539.1;Parent=gene-STY7866_RS14465;Dbxref=Genbank:WP_000308539.1;Name=WP_000308539.1;end_range=6408,.;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456446.1;locus_tag=STY7866_RS14465;partial=true;product=exodeoxyribonuclease X;protein_id=WP_000308539.1;transl_table=11
##sequence-region NZ_CAAR01000375.1 1 5026
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000375.1	RefSeq	region	1	5026	.	+	.	ID=NZ_CAAR01000375.1:1..5026;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000375.1	RefSeq	pseudogene	1	137	.	-	.	ID=gene-STY7866_RS14410;Name=STY7866_RS14410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14410;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000375.1	Protein Homology	CDS	1	137	.	-	0	ID=cds-STY7866_RS14410;Parent=gene-STY7866_RS14410;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455862.1;locus_tag=STY7866_RS14410;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000375.1	RefSeq	gene	338	4240	.	+	.	ID=gene-STY7866_RS14415;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=STY7866_RS14415
NZ_CAAR01000375.1	Protein Homology	CDS	338	4240	.	+	0	ID=cds-WP_001764242.1;Parent=gene-STY7866_RS14415;Dbxref=Genbank:WP_001764242.1;Name=WP_001764242.1;gbkey=CDS;gene=hrpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455863.3;locus_tag=STY7866_RS14415;product=ATP-dependent RNA helicase HrpA;protein_id=WP_001764242.1;transl_table=11
NZ_CAAR01000375.1	RefSeq	gene	4304	5026	.	+	.	ID=gene-STY7866_RS14420;Name=STY7866_RS14420;end_range=5026,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14420;partial=true
NZ_CAAR01000375.1	Protein Homology	CDS	4304	5026	.	+	0	ID=cds-WP_001098504.1;Parent=gene-STY7866_RS14420;Dbxref=Genbank:WP_001098504.1;Name=WP_001098504.1;end_range=5026,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455864.1;locus_tag=STY7866_RS14420;partial=true;product=YdcF family protein;protein_id=WP_001098504.1;transl_table=11
##sequence-region NZ_CAAR01000374.1 1 3165
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000374.1	RefSeq	region	1	3165	.	+	.	ID=NZ_CAAR01000374.1:1..3165;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000374.1	RefSeq	pseudogene	1	146	.	+	.	ID=gene-STY7866_RS27455;Name=STY7866_RS27455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27455;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000374.1	Protein Homology	CDS	1	146	.	+	2	ID=cds-STY7866_RS27455;Parent=gene-STY7866_RS27455;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457324.1;locus_tag=STY7866_RS27455;partial=true;product=sulfate adenylyltransferase small subunit;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000374.1	RefSeq	gene	156	1595	.	+	.	ID=gene-STY7866_RS14390;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=STY7866_RS14390
NZ_CAAR01000374.1	Protein Homology	CDS	156	1595	.	+	0	ID=cds-WP_001092274.1;Parent=gene-STY7866_RS14390;Dbxref=Genbank:WP_001092274.1;Name=WP_001092274.1;gbkey=CDS;gene=cysN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457323.1;locus_tag=STY7866_RS14390;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001092274.1;transl_table=11
NZ_CAAR01000374.1	RefSeq	gene	1582	2187	.	+	.	ID=gene-STY7866_RS14395;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=STY7866_RS14395
NZ_CAAR01000374.1	Protein Homology	CDS	1582	2187	.	+	0	ID=cds-WP_001173663.1;Parent=gene-STY7866_RS14395;Dbxref=Genbank:WP_001173663.1;Name=WP_001173663.1;gbkey=CDS;gene=cysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457322.1;locus_tag=STY7866_RS14395;product=adenylyl-sulfate kinase;protein_id=WP_001173663.1;transl_table=11
NZ_CAAR01000374.1	RefSeq	gene	2205	2561	.	+	.	ID=gene-STY7866_RS14400;Name=STY7866_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14400
NZ_CAAR01000374.1	Protein Homology	CDS	2205	2561	.	+	0	ID=cds-WP_001118109.1;Parent=gene-STY7866_RS14400;Dbxref=Genbank:WP_001118109.1;Name=WP_001118109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457321.1;locus_tag=STY7866_RS14400;product=DUF3561 family protein;protein_id=WP_001118109.1;transl_table=11
NZ_CAAR01000374.1	RefSeq	gene	2752	3063	.	+	.	ID=gene-STY7866_RS14405;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=STY7866_RS14405
NZ_CAAR01000374.1	Protein Homology	CDS	2752	3063	.	+	0	ID=cds-WP_000517480.1;Parent=gene-STY7866_RS14405;Dbxref=Genbank:WP_000517480.1;Name=WP_000517480.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457320.1;locus_tag=STY7866_RS14405;product=cell division protein FtsB;protein_id=WP_000517480.1;transl_table=11
NZ_CAAR01000374.1	RefSeq	pseudogene	3082	3165	.	+	.	ID=gene-STY7866_RS27460;Name=STY7866_RS27460;end_range=3165,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27460;partial=true;pseudo=true
NZ_CAAR01000374.1	Protein Homology	CDS	3082	3165	.	+	0	ID=cds-STY7866_RS27460;Parent=gene-STY7866_RS27460;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3165,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457319.1;locus_tag=STY7866_RS27460;partial=true;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000373.1 1 804
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000373.1	RefSeq	region	1	804	.	+	.	ID=NZ_CAAR01000373.1:1..804;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000373.1	RefSeq	gene	3	804	.	+	.	ID=gene-STY7866_RS14380;Name=STY7866_RS14380;end_range=804,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14380;partial=true
NZ_CAAR01000373.1	Protein Homology	CDS	3	804	.	+	0	ID=cds-WP_001764238.1;Parent=gene-STY7866_RS14380;Dbxref=Genbank:WP_001764238.1;Name=WP_001764238.1;end_range=804,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001615322.1;locus_tag=STY7866_RS14380;partial=true;product=fimbrial protein BcfD;protein_id=WP_001764238.1;transl_table=11
##sequence-region NZ_CAAR01000372.1 1 5881
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000372.1	RefSeq	region	1	5881	.	+	.	ID=NZ_CAAR01000372.1:1..5881;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000372.1	RefSeq	gene	14	409	.	+	.	ID=gene-STY7866_RS14340;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=STY7866_RS14340
NZ_CAAR01000372.1	Protein Homology	CDS	14	409	.	+	0	ID=cds-WP_000736063.1;Parent=gene-STY7866_RS14340;Dbxref=Genbank:WP_000736063.1;Name=WP_000736063.1;gbkey=CDS;gene=mutT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454749.1;locus_tag=STY7866_RS14340;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736063.1;transl_table=11
NZ_CAAR01000372.1	RefSeq	gene	443	1432	.	-	.	ID=gene-STY7866_RS14345;Name=STY7866_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14345
NZ_CAAR01000372.1	Protein Homology	CDS	443	1432	.	-	0	ID=cds-WP_001200039.1;Parent=gene-STY7866_RS14345;Dbxref=Genbank:WP_001200039.1;Name=WP_001200039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454750.1;locus_tag=STY7866_RS14345;product=aldo/keto reductase;protein_id=WP_001200039.1;transl_table=11
NZ_CAAR01000372.1	RefSeq	gene	1518	2459	.	+	.	ID=gene-STY7866_RS14350;Name=STY7866_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14350
NZ_CAAR01000372.1	Protein Homology	CDS	1518	2459	.	+	0	ID=cds-WP_001802116.1;Parent=gene-STY7866_RS14350;Dbxref=Genbank:WP_001802116.1;Name=WP_001802116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454751.1;locus_tag=STY7866_RS14350;product=LysR family transcriptional regulator;protein_id=WP_001802116.1;transl_table=11
NZ_CAAR01000372.1	RefSeq	gene	2456	2647	.	-	.	ID=gene-STY7866_RS14355;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=STY7866_RS14355
NZ_CAAR01000372.1	Protein Homology	CDS	2456	2647	.	-	0	ID=cds-WP_001286419.1;Parent=gene-STY7866_RS14355;Dbxref=Genbank:WP_001286419.1;Name=WP_001286419.1;gbkey=CDS;gene=yacG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454752.1;locus_tag=STY7866_RS14355;product=DNA gyrase inhibitor YacG;protein_id=WP_001286419.1;transl_table=11
NZ_CAAR01000372.1	RefSeq	gene	2657	3400	.	-	.	ID=gene-STY7866_RS14360;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=STY7866_RS14360
NZ_CAAR01000372.1	Protein Homology	CDS	2657	3400	.	-	0	ID=cds-WP_000557441.1;Parent=gene-STY7866_RS14360;Dbxref=Genbank:WP_000557441.1;Name=WP_000557441.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454753.1;locus_tag=STY7866_RS14360;product=cell division protein ZapD;protein_id=WP_000557441.1;transl_table=11
NZ_CAAR01000372.1	RefSeq	gene	3400	4020	.	-	.	ID=gene-STY7866_RS14365;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=STY7866_RS14365
NZ_CAAR01000372.1	Protein Homology	CDS	3400	4020	.	-	0	ID=cds-WP_001270913.1;Parent=gene-STY7866_RS14365;Dbxref=Genbank:WP_001270913.1;Name=WP_001270913.1;gbkey=CDS;gene=coaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454754.1;locus_tag=STY7866_RS14365;product=dephospho-CoA kinase;protein_id=WP_001270913.1;transl_table=11
NZ_CAAR01000372.1	RefSeq	gene	4246	5289	.	+	.	ID=gene-STY7866_RS14370;Name=STY7866_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14370
NZ_CAAR01000372.1	Protein Homology	CDS	4246	5289	.	+	0	ID=cds-WP_001217357.1;Parent=gene-STY7866_RS14370;Dbxref=Genbank:WP_001217357.1;Name=WP_001217357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454755.1;locus_tag=STY7866_RS14370;product=GMP reductase;protein_id=WP_001217357.1;transl_table=11
NZ_CAAR01000372.1	RefSeq	pseudogene	5320	5881	.	-	.	ID=gene-STY7866_RS14375;Name=STY7866_RS14375;end_range=5881,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14375;partial=true;pseudo=true
NZ_CAAR01000372.1	Protein Homology	CDS	5320	5881	.	-	1	ID=cds-STY7866_RS14375;Parent=gene-STY7866_RS14375;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5881,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454756.1;locus_tag=STY7866_RS14375;partial=true;product=type IV pilin biogenesis protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000371.1 1 4605
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000371.1	RefSeq	region	1	4605	.	+	.	ID=NZ_CAAR01000371.1:1..4605;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000371.1	RefSeq	gene	41	117	.	-	.	ID=gene-STY7866_RS14300;Name=STY7866_RS14300;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS14300
NZ_CAAR01000371.1	tRNAscan-SE	tRNA	41	117	.	-	.	ID=rna-STY7866_RS14300;Parent=gene-STY7866_RS14300;anticodon=(pos:complement(81..83));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS14300;product=tRNA-Met
NZ_CAAR01000371.1	tRNAscan-SE	exon	41	117	.	-	.	ID=exon-STY7866_RS14300-1;Parent=rna-STY7866_RS14300;anticodon=(pos:complement(81..83));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS14300;product=tRNA-Met
NZ_CAAR01000371.1	RefSeq	gene	133	207	.	-	.	ID=gene-STY7866_RS14305;Name=STY7866_RS14305;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS14305
NZ_CAAR01000371.1	tRNAscan-SE	tRNA	133	207	.	-	.	ID=rna-STY7866_RS14305;Parent=gene-STY7866_RS14305;anticodon=(pos:complement(173..175));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS14305;product=tRNA-Gln
NZ_CAAR01000371.1	tRNAscan-SE	exon	133	207	.	-	.	ID=exon-STY7866_RS14305-1;Parent=rna-STY7866_RS14305;anticodon=(pos:complement(173..175));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS14305;product=tRNA-Gln
NZ_CAAR01000371.1	RefSeq	gene	243	317	.	-	.	ID=gene-STY7866_RS14310;Name=STY7866_RS14310;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS14310
NZ_CAAR01000371.1	tRNAscan-SE	tRNA	243	317	.	-	.	ID=rna-STY7866_RS14310;Parent=gene-STY7866_RS14310;anticodon=(pos:complement(283..285));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS14310;product=tRNA-Gln
NZ_CAAR01000371.1	tRNAscan-SE	exon	243	317	.	-	.	ID=exon-STY7866_RS14310-1;Parent=rna-STY7866_RS14310;anticodon=(pos:complement(283..285));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS14310;product=tRNA-Gln
NZ_CAAR01000371.1	RefSeq	gene	341	425	.	-	.	ID=gene-STY7866_RS14315;Name=STY7866_RS14315;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS14315
NZ_CAAR01000371.1	tRNAscan-SE	tRNA	341	425	.	-	.	ID=rna-STY7866_RS14315;Parent=gene-STY7866_RS14315;anticodon=(pos:complement(389..391));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS14315;product=tRNA-Leu
NZ_CAAR01000371.1	tRNAscan-SE	exon	341	425	.	-	.	ID=exon-STY7866_RS14315-1;Parent=rna-STY7866_RS14315;anticodon=(pos:complement(389..391));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS14315;product=tRNA-Leu
NZ_CAAR01000371.1	RefSeq	gene	434	510	.	-	.	ID=gene-STY7866_RS14320;Name=STY7866_RS14320;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS14320
NZ_CAAR01000371.1	tRNAscan-SE	tRNA	434	510	.	-	.	ID=rna-STY7866_RS14320;Parent=gene-STY7866_RS14320;anticodon=(pos:complement(474..476));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS14320;product=tRNA-Met
NZ_CAAR01000371.1	tRNAscan-SE	exon	434	510	.	-	.	ID=exon-STY7866_RS14320-1;Parent=rna-STY7866_RS14320;anticodon=(pos:complement(474..476));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS14320;product=tRNA-Met
NZ_CAAR01000371.1	RefSeq	gene	732	2396	.	-	.	ID=gene-STY7866_RS14325;Name=STY7866_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14325
NZ_CAAR01000371.1	Protein Homology	CDS	732	2396	.	-	0	ID=cds-WP_000337026.1;Parent=gene-STY7866_RS14325;Dbxref=Genbank:WP_000337026.1;Name=WP_000337026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455241.1;locus_tag=STY7866_RS14325;product=asparagine synthase B;protein_id=WP_000337026.1;transl_table=11
NZ_CAAR01000371.1	RefSeq	pseudogene	2447	2521	.	+	.	ID=gene-STY7866_RS27450;Name=STY7866_RS27450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27450;partial=true;pseudo=true;start_range=.,2447
NZ_CAAR01000371.1	Protein Homology	CDS	2447	2521	.	+	0	ID=cds-STY7866_RS27450;Parent=gene-STY7866_RS27450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121414.1;locus_tag=STY7866_RS27450;partial=true;product=peroxiredoxin;pseudo=true;start_range=.,2447;transl_table=11
NZ_CAAR01000371.1	RefSeq	pseudogene	2686	3440	.	-	.	ID=gene-STY7866_RS14330;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=pseudogene;locus_tag=STY7866_RS14330;pseudo=true
NZ_CAAR01000371.1	Protein Homology	CDS	2686	3440	.	-	0	ID=cds-STY7866_RS14330;Parent=gene-STY7866_RS14330;Note=frameshifted;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455242.1;locus_tag=STY7866_RS14330;product=ribonucleotide monophosphatase NagD;pseudo=true;transl_table=11
NZ_CAAR01000371.1	RefSeq	gene	3487	4605	.	-	.	ID=gene-STY7866_RS14335;Name=STY7866_RS14335;end_range=4605,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14335;partial=true
NZ_CAAR01000371.1	Protein Homology	CDS	3487	4605	.	-	0	ID=cds-WP_000306132.1;Parent=gene-STY7866_RS14335;Dbxref=Genbank:WP_000306132.1;Name=WP_000306132.1;end_range=4605,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455243.1;locus_tag=STY7866_RS14335;partial=true;product=ROK family protein;protein_id=WP_000306132.1;transl_table=11
##sequence-region NZ_CAAR01000370.1 1 1302
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000370.1	RefSeq	region	1	1302	.	+	.	ID=NZ_CAAR01000370.1:1..1302;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000370.1	RefSeq	gene	1	626	.	-	.	ID=gene-STY7866_RS14290;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=STY7866_RS14290;partial=true;start_range=.,1
NZ_CAAR01000370.1	Protein Homology	CDS	1	626	.	-	0	ID=cds-WP_001764237.1;Parent=gene-STY7866_RS14290;Dbxref=Genbank:WP_001764237.1;Name=WP_001764237.1;gbkey=CDS;gene=djlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454706.1;locus_tag=STY7866_RS14290;partial=true;product=co-chaperone DjlA;protein_id=WP_001764237.1;start_range=.,1;transl_table=11
NZ_CAAR01000370.1	RefSeq	pseudogene	880	1302	.	+	.	ID=gene-STY7866_RS14295;Name=STY7866_RS14295;end_range=1302,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14295;partial=true;pseudo=true
NZ_CAAR01000370.1	Protein Homology	CDS	880	1302	.	+	0	ID=cds-STY7866_RS14295;Parent=gene-STY7866_RS14295;Note=is involved in outer membrane permeability%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1302,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454705.1;locus_tag=STY7866_RS14295;partial=true;product=LPS-assembly protein LptD;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000369.1 1 2984
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000369.1	RefSeq	region	1	2984	.	+	.	ID=NZ_CAAR01000369.1:1..2984;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000369.1	RefSeq	pseudogene	1	290	.	-	.	ID=gene-STY7866_RS14275;Name=STY7866_RS14275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14275;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000369.1	Protein Homology	CDS	1	290	.	-	0	ID=cds-STY7866_RS14275;Parent=gene-STY7866_RS14275;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456899.1;locus_tag=STY7866_RS14275;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000369.1	RefSeq	gene	354	1457	.	-	.	ID=gene-STY7866_RS14280;Name=STY7866_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14280
NZ_CAAR01000369.1	Protein Homology	CDS	354	1457	.	-	0	ID=cds-WP_000281913.1;Parent=gene-STY7866_RS14280;Dbxref=Genbank:WP_000281913.1;Name=WP_000281913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456900.1;locus_tag=STY7866_RS14280;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_000281913.1;transl_table=11
NZ_CAAR01000369.1	RefSeq	gene	1459	2880	.	-	.	ID=gene-STY7866_RS14285;Name=STY7866_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14285
NZ_CAAR01000369.1	Protein Homology	CDS	1459	2880	.	-	0	ID=cds-WP_000072509.1;Parent=gene-STY7866_RS14285;Dbxref=Genbank:WP_000072509.1;Name=WP_000072509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456901.1;locus_tag=STY7866_RS14285;product=amino acid permease;protein_id=WP_000072509.1;transl_table=11
##sequence-region NZ_CAAR01000368.1 1 2101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000368.1	RefSeq	region	1	2101	.	+	.	ID=NZ_CAAR01000368.1:1..2101;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000368.1	RefSeq	pseudogene	1	88	.	+	.	ID=gene-STY7866_RS27445;Name=STY7866_RS27445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27445;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000368.1	Protein Homology	CDS	1	88	.	+	1	ID=cds-STY7866_RS27445;Parent=gene-STY7866_RS27445;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=STY7866_RS27445;partial=true;product=molybdenum cofactor biosynthesis protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000368.1	RefSeq	gene	91	576	.	+	.	ID=gene-STY7866_RS14255;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=STY7866_RS14255
NZ_CAAR01000368.1	Protein Homology	CDS	91	576	.	+	0	ID=cds-WP_000080893.1;Parent=gene-STY7866_RS14255;Dbxref=Genbank:WP_000080893.1;Name=WP_000080893.1;gbkey=CDS;gene=moaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455345.1;locus_tag=STY7866_RS14255;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080893.1;transl_table=11
NZ_CAAR01000368.1	RefSeq	gene	563	814	.	+	.	ID=gene-STY7866_RS14260;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=STY7866_RS14260
NZ_CAAR01000368.1	Protein Homology	CDS	563	814	.	+	0	ID=cds-WP_011233097.1;Parent=gene-STY7866_RS14260;Dbxref=Genbank:WP_011233097.1;Name=WP_011233097.1;gbkey=CDS;gene=moaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455346.3;locus_tag=STY7866_RS14260;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_011233097.1;transl_table=11
NZ_CAAR01000368.1	RefSeq	gene	816	1268	.	+	.	ID=gene-STY7866_RS14265;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=STY7866_RS14265
NZ_CAAR01000368.1	Protein Homology	CDS	816	1268	.	+	0	ID=cds-WP_000545202.1;Parent=gene-STY7866_RS14265;Dbxref=Genbank:WP_000545202.1;Name=WP_000545202.1;gbkey=CDS;gene=moaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455347.1;locus_tag=STY7866_RS14265;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_000545202.1;transl_table=11
NZ_CAAR01000368.1	RefSeq	pseudogene	1316	2022	.	+	.	ID=gene-STY7866_RS14270;Name=STY7866_RS14270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14270;pseudo=true
NZ_CAAR01000368.1	Protein Homology	CDS	1316	2022	.	+	0	ID=cds-STY7866_RS14270;Parent=gene-STY7866_RS14270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000373608.1;locus_tag=STY7866_RS14270;product=Bax inhibitor-1/YccA family protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000367.1 1 13730
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000367.1	RefSeq	region	1	13730	.	+	.	ID=NZ_CAAR01000367.1:1..13730;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000367.1	RefSeq	pseudogene	1	199	.	-	.	ID=gene-STY7866_RS27440;Name=STY7866_RS27440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27440;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000367.1	Protein Homology	CDS	1	199	.	-	0	ID=cds-STY7866_RS27440;Parent=gene-STY7866_RS27440;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454977.1;locus_tag=STY7866_RS27440;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000367.1	RefSeq	gene	368	1081	.	-	.	ID=gene-STY7866_RS14195;Name=STY7866_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14195
NZ_CAAR01000367.1	Protein Homology	CDS	368	1081	.	-	0	ID=cds-WP_000480795.1;Parent=gene-STY7866_RS14195;Dbxref=Genbank:WP_000480795.1;Name=WP_000480795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454976.1;locus_tag=STY7866_RS14195;product=extensin family protein;protein_id=WP_000480795.1;transl_table=11
NZ_CAAR01000367.1	RefSeq	gene	1159	2253	.	+	.	ID=gene-STY7866_RS14200;Name=STY7866_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14200
NZ_CAAR01000367.1	Protein Homology	CDS	1159	2253	.	+	0	ID=cds-WP_001096588.1;Parent=gene-STY7866_RS14200;Dbxref=Genbank:WP_001096588.1;Name=WP_001096588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454975.1;locus_tag=STY7866_RS14200;product=D-alanine--D-alanine ligase;protein_id=WP_001096588.1;transl_table=11
NZ_CAAR01000367.1	RefSeq	gene	2279	2494	.	-	.	ID=gene-STY7866_RS14205;Name=STY7866_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14205
NZ_CAAR01000367.1	Protein Homology	CDS	2279	2494	.	-	0	ID=cds-WP_001239240.1;Parent=gene-STY7866_RS14205;Dbxref=Genbank:WP_001239240.1;Name=WP_001239240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454974.1;locus_tag=STY7866_RS14205;product=DUF2754 family protein;protein_id=WP_001239240.1;transl_table=11
NZ_CAAR01000367.1	RefSeq	gene	2762	3070	.	+	.	ID=gene-STY7866_RS14210;Name=STY7866_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14210
NZ_CAAR01000367.1	Protein Homology	CDS	2762	3070	.	+	0	ID=cds-WP_000763139.1;Parent=gene-STY7866_RS14210;Dbxref=Genbank:WP_000763139.1;Name=WP_000763139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454973.1;locus_tag=STY7866_RS14210;product=DUF2755 family protein;protein_id=WP_000763139.1;transl_table=11
NZ_CAAR01000367.1	RefSeq	gene	3108	4202	.	-	.	ID=gene-STY7866_RS14215;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=STY7866_RS14215
NZ_CAAR01000367.1	Protein Homology	CDS	3108	4202	.	-	0	ID=cds-WP_001271423.1;Parent=gene-STY7866_RS14215;Dbxref=Genbank:WP_001271423.1;Name=WP_001271423.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454972.1;locus_tag=STY7866_RS14215;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_001271423.1;transl_table=11
NZ_CAAR01000367.1	RefSeq	gene	4217	5437	.	-	.	ID=gene-STY7866_RS14220;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=STY7866_RS14220
NZ_CAAR01000367.1	Protein Homology	CDS	4217	5437	.	-	0	ID=cds-WP_000477016.1;Parent=gene-STY7866_RS14220;Dbxref=Genbank:WP_000477016.1;Name=WP_000477016.1;gbkey=CDS;gene=sbmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454971.1;locus_tag=STY7866_RS14220;product=peptide antibiotic transporter SbmA;protein_id=WP_000477016.1;transl_table=11
NZ_CAAR01000367.1	RefSeq	pseudogene	5774	6929	.	+	.	ID=gene-STY7866_RS14225;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=pseudogene;locus_tag=STY7866_RS14225;pseudo=true
NZ_CAAR01000367.1	Protein Homology	CDS	5774	6929	.	+	0	ID=cds-STY7866_RS14225;Parent=gene-STY7866_RS14225;Note=frameshifted;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454970.1;locus_tag=STY7866_RS14225;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;pseudo=true;transl_table=11
NZ_CAAR01000367.1	RefSeq	gene	6975	7598	.	-	.	ID=gene-STY7866_RS14230;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=STY7866_RS14230
NZ_CAAR01000367.1	Protein Homology	CDS	6975	7598	.	-	0	ID=cds-WP_000950094.1;Parent=gene-STY7866_RS14230;Dbxref=Genbank:WP_000950094.1;Name=WP_000950094.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454969.1;locus_tag=STY7866_RS14230;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_000950094.1;transl_table=11
NZ_CAAR01000367.1	RefSeq	gene	7684	10569	.	-	.	ID=gene-STY7866_RS14235;Name=STY7866_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14235
NZ_CAAR01000367.1	Protein Homology	CDS	7684	10569	.	-	0	ID=cds-WP_000556507.1;Parent=gene-STY7866_RS14235;Dbxref=Genbank:WP_000556507.1;Name=WP_000556507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454968.1;locus_tag=STY7866_RS14235;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000556507.1;transl_table=11
NZ_CAAR01000367.1	RefSeq	gene	11082	12056	.	+	.	ID=gene-STY7866_RS14240;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=STY7866_RS14240
NZ_CAAR01000367.1	Protein Homology	CDS	11082	12056	.	+	0	ID=cds-WP_000130724.1;Parent=gene-STY7866_RS14240;Dbxref=Genbank:WP_000130724.1;Name=WP_000130724.1;gbkey=CDS;gene=hemB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454967.1;locus_tag=STY7866_RS14240;product=porphobilinogen synthase;protein_id=WP_000130724.1;transl_table=11
NZ_CAAR01000367.1	RefSeq	gene	12160	13730	.	-	.	ID=gene-STY7866_RS14245;Name=prpE;end_range=13730,.;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=STY7866_RS14245;partial=true
NZ_CAAR01000367.1	Protein Homology	CDS	12160	13730	.	-	2	ID=cds-WP_000305533.1;Parent=gene-STY7866_RS14245;Dbxref=Genbank:WP_000305533.1;Name=WP_000305533.1;end_range=13730,.;gbkey=CDS;gene=prpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454966.1;locus_tag=STY7866_RS14245;partial=true;product=propionate--CoA ligase;protein_id=WP_000305533.1;transl_table=11
##sequence-region NZ_CAAR01000366.1 1 3729
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000366.1	RefSeq	region	1	3729	.	+	.	ID=NZ_CAAR01000366.1:1..3729;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000366.1	RefSeq	gene	1	403	.	-	.	ID=gene-STY7866_RS14165;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=STY7866_RS14165;partial=true;start_range=.,1
NZ_CAAR01000366.1	Protein Homology	CDS	1	403	.	-	0	ID=cds-WP_001262577.1;Parent=gene-STY7866_RS14165;Dbxref=Genbank:WP_001262577.1;Name=WP_001262577.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456299.1;locus_tag=STY7866_RS14165;partial=true;product=hydrogenase-1 operon protein HyaE;protein_id=WP_001262577.1;start_range=.,1;transl_table=11
NZ_CAAR01000366.1	RefSeq	gene	393	989	.	-	.	ID=gene-STY7866_RS14170;Name=STY7866_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14170
NZ_CAAR01000366.1	Protein Homology	CDS	393	989	.	-	0	ID=cds-WP_000993803.1;Parent=gene-STY7866_RS14170;Dbxref=Genbank:WP_000993803.1;Name=WP_000993803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456298.1;locus_tag=STY7866_RS14170;product=hydrogenase 1 maturation protease;protein_id=WP_000993803.1;transl_table=11
NZ_CAAR01000366.1	RefSeq	gene	986	1717	.	-	.	ID=gene-STY7866_RS14175;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=STY7866_RS14175
NZ_CAAR01000366.1	Protein Homology	CDS	986	1717	.	-	0	ID=cds-WP_000147028.1;Parent=gene-STY7866_RS14175;Dbxref=Genbank:WP_000147028.1;Name=WP_000147028.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456297.1;locus_tag=STY7866_RS14175;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_000147028.1;transl_table=11
NZ_CAAR01000366.1	RefSeq	gene	1736	3529	.	-	.	ID=gene-STY7866_RS14180;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=STY7866_RS14180
NZ_CAAR01000366.1	Protein Homology	CDS	1736	3529	.	-	0	ID=cds-WP_000070982.1;Parent=gene-STY7866_RS14180;Dbxref=Genbank:WP_000070982.1;Name=WP_000070982.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456296.1;locus_tag=STY7866_RS14180;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000070982.1;transl_table=11
NZ_CAAR01000366.1	RefSeq	pseudogene	3526	3729	.	-	.	ID=gene-STY7866_RS14185;Name=STY7866_RS14185;end_range=3729,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14185;partial=true;pseudo=true
NZ_CAAR01000366.1	Protein Homology	CDS	3526	3729	.	-	0	ID=cds-STY7866_RS14185;Parent=gene-STY7866_RS14185;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3729,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=STY7866_RS14185;partial=true;product=[Ni/Fe] hydrogenase small subunit;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000365.1 1 2817
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000365.1	RefSeq	region	1	2817	.	+	.	ID=NZ_CAAR01000365.1:1..2817;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000365.1	RefSeq	gene	1	1933	.	-	.	ID=gene-STY7866_RS14155;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=STY7866_RS14155;partial=true;start_range=.,1
NZ_CAAR01000365.1	Protein Homology	CDS	1	1933	.	-	0	ID=cds-WP_000488256.1;Parent=gene-STY7866_RS14155;Dbxref=Genbank:WP_000488256.1;Name=WP_000488256.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456757.1;locus_tag=STY7866_RS14155;partial=true;product=catecholate siderophore receptor CirA;protein_id=WP_000488256.1;start_range=.,1;transl_table=11
NZ_CAAR01000365.1	RefSeq	gene	2279	2817	.	-	.	ID=gene-STY7866_RS14160;Name=STY7866_RS14160;end_range=2817,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14160;partial=true
NZ_CAAR01000365.1	Protein Homology	CDS	2279	2817	.	-	2	ID=cds-WP_001764234.1;Parent=gene-STY7866_RS14160;Dbxref=Genbank:WP_001764234.1;Name=WP_001764234.1;end_range=2817,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456758.1;locus_tag=STY7866_RS14160;partial=true;product=amino acid permease;protein_id=WP_001764234.1;transl_table=11
##sequence-region NZ_CAAR01000364.1 1 4698
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000364.1	RefSeq	region	1	4698	.	+	.	ID=NZ_CAAR01000364.1:1..4698;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000364.1	RefSeq	pseudogene	1	128	.	+	.	ID=gene-STY7866_RS27430;Name=STY7866_RS27430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27430;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000364.1	Protein Homology	CDS	1	128	.	+	2	ID=cds-STY7866_RS27430;Parent=gene-STY7866_RS27430;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455353.1;locus_tag=STY7866_RS27430;partial=true;product=ABC transporter permease;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000364.1	RefSeq	gene	90	500	.	-	.	ID=gene-STY7866_RS14125;Name=STY7866_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14125
NZ_CAAR01000364.1	Protein Homology	CDS	90	500	.	-	0	ID=cds-WP_000871970.1;Parent=gene-STY7866_RS14125;Dbxref=Genbank:WP_000871970.1;Name=WP_000871970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455352.1;locus_tag=STY7866_RS14125;product=membrane protein;protein_id=WP_000871970.1;transl_table=11
NZ_CAAR01000364.1	RefSeq	gene	633	1391	.	+	.	ID=gene-STY7866_RS14130;Name=STY7866_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14130
NZ_CAAR01000364.1	Protein Homology	CDS	633	1391	.	+	0	ID=cds-WP_000192041.1;Parent=gene-STY7866_RS14130;Dbxref=Genbank:WP_000192041.1;Name=WP_000192041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455351.1;locus_tag=STY7866_RS14130;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_000192041.1;transl_table=11
NZ_CAAR01000364.1	RefSeq	gene	1388	2629	.	+	.	ID=gene-STY7866_RS14135;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=STY7866_RS14135
NZ_CAAR01000364.1	Protein Homology	CDS	1388	2629	.	+	0	ID=cds-WP_000649638.1;Parent=gene-STY7866_RS14135;Dbxref=Genbank:WP_000649638.1;Name=WP_000649638.1;gbkey=CDS;gene=clsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455350.1;locus_tag=STY7866_RS14135;product=cardiolipin synthase ClsB;protein_id=WP_000649638.1;transl_table=11
NZ_CAAR01000364.1	RefSeq	gene	2629	3531	.	+	.	ID=gene-STY7866_RS14140;Name=STY7866_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14140
NZ_CAAR01000364.1	Protein Homology	CDS	2629	3531	.	+	0	ID=cds-WP_001764232.1;Parent=gene-STY7866_RS14140;Dbxref=Genbank:WP_001764232.1;Name=WP_001764232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535947.1;locus_tag=STY7866_RS14140;product=membrane protein;protein_id=WP_001764232.1;transl_table=11
NZ_CAAR01000364.1	RefSeq	gene	3593	3835	.	-	.	ID=gene-STY7866_RS14145;Name=STY7866_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14145
NZ_CAAR01000364.1	Protein Homology	CDS	3593	3835	.	-	0	ID=cds-WP_000017220.1;Parent=gene-STY7866_RS14145;Dbxref=Genbank:WP_000017220.1;Name=WP_000017220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000017217.1;locus_tag=STY7866_RS14145;product=hypothetical protein;protein_id=WP_000017220.1;transl_table=11
NZ_CAAR01000364.1	RefSeq	gene	3738	4079	.	-	.	ID=gene-STY7866_RS27435;Name=STY7866_RS27435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27435
NZ_CAAR01000364.1	Protein Homology	CDS	3738	4079	.	-	0	ID=cds-WP_129396348.1;Parent=gene-STY7866_RS27435;Dbxref=Genbank:WP_129396348.1;Name=WP_129396348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=STY7866_RS27435;product=hypothetical protein;protein_id=WP_129396348.1;transl_table=11
NZ_CAAR01000364.1	RefSeq	gene	4025	4678	.	-	.	ID=gene-STY7866_RS14150;Name=STY7866_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14150
NZ_CAAR01000364.1	Protein Homology	CDS	4025	4678	.	-	0	ID=cds-WP_014341411.1;Parent=gene-STY7866_RS14150;Dbxref=Genbank:WP_014341411.1;Name=WP_014341411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662286.1;locus_tag=STY7866_RS14150;product=membrane protein;protein_id=WP_014341411.1;transl_table=11
##sequence-region NZ_CAAR01000363.1 1 3312
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000363.1	RefSeq	region	1	3312	.	+	.	ID=NZ_CAAR01000363.1:1..3312;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000363.1	RefSeq	gene	79	1275	.	-	.	ID=gene-STY7866_RS14100;Name=STY7866_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14100
NZ_CAAR01000363.1	Protein Homology	CDS	79	1275	.	-	0	ID=cds-WP_001276375.1;Parent=gene-STY7866_RS14100;Dbxref=Genbank:WP_001276375.1;Name=WP_001276375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457103.1;locus_tag=STY7866_RS14100;product=OFA family MFS transporter;protein_id=WP_001276375.1;transl_table=11
NZ_CAAR01000363.1	RefSeq	gene	1391	2302	.	+	.	ID=gene-STY7866_RS14105;Name=STY7866_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14105
NZ_CAAR01000363.1	Protein Homology	CDS	1391	2302	.	+	0	ID=cds-WP_001581956.1;Parent=gene-STY7866_RS14105;Dbxref=Genbank:WP_001581956.1;Name=WP_001581956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457104.1;locus_tag=STY7866_RS14105;product=LysR family transcriptional regulator;protein_id=WP_001581956.1;transl_table=11
NZ_CAAR01000363.1	RefSeq	gene	2355	2615	.	+	.	ID=gene-STY7866_RS14110;Name=STY7866_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14110
NZ_CAAR01000363.1	Protein Homology	CDS	2355	2615	.	+	0	ID=cds-WP_001196291.1;Parent=gene-STY7866_RS14110;Dbxref=Genbank:WP_001196291.1;Name=WP_001196291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457105.1;locus_tag=STY7866_RS14110;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_001196291.1;transl_table=11
NZ_CAAR01000363.1	RefSeq	gene	2727	3107	.	-	.	ID=gene-STY7866_RS14115;Name=STY7866_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14115
NZ_CAAR01000363.1	Protein Homology	CDS	2727	3107	.	-	0	ID=cds-WP_000986043.1;Parent=gene-STY7866_RS14115;Dbxref=Genbank:WP_000986043.1;Name=WP_000986043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457106.1;locus_tag=STY7866_RS14115;product=holo-ACP synthase;protein_id=WP_000986043.1;transl_table=11
NZ_CAAR01000363.1	RefSeq	pseudogene	3107	3312	.	-	.	ID=gene-STY7866_RS14120;Name=STY7866_RS14120;end_range=3312,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14120;partial=true;pseudo=true
NZ_CAAR01000363.1	Protein Homology	CDS	3107	3312	.	-	2	ID=cds-STY7866_RS14120;Parent=gene-STY7866_RS14120;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3312,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457107.1;locus_tag=STY7866_RS14120;partial=true;product=pyridoxine 5'-phosphate synthase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000362.1 1 3757
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000362.1	RefSeq	region	1	3757	.	+	.	ID=NZ_CAAR01000362.1:1..3757;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000362.1	RefSeq	gene	1	738	.	+	.	ID=gene-STY7866_RS14085;Name=STY7866_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14085;partial=true;start_range=.,1
NZ_CAAR01000362.1	Protein Homology	CDS	1	738	.	+	0	ID=cds-WP_000297607.1;Parent=gene-STY7866_RS14085;Dbxref=Genbank:WP_000297607.1;Name=WP_000297607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007767120.1;locus_tag=STY7866_RS14085;partial=true;product=leucyl aminopeptidase;protein_id=WP_000297607.1;start_range=.,1;transl_table=11
NZ_CAAR01000362.1	RefSeq	gene	836	1318	.	+	.	ID=gene-STY7866_RS14090;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=STY7866_RS14090
NZ_CAAR01000362.1	Protein Homology	CDS	836	1318	.	+	0	ID=cds-WP_000190722.1;Parent=gene-STY7866_RS14090;Dbxref=Genbank:WP_000190722.1;Name=WP_000190722.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458894.1;locus_tag=STY7866_RS14090;product=DNA polymerase III subunit chi;protein_id=WP_000190722.1;transl_table=11
NZ_CAAR01000362.1	RefSeq	gene	1318	3757	.	+	.	ID=gene-STY7866_RS14095;Name=valS;end_range=3757,.;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=STY7866_RS14095;partial=true
NZ_CAAR01000362.1	Protein Homology	CDS	1318	3757	.	+	0	ID=cds-WP_000416347.1;Parent=gene-STY7866_RS14095;Dbxref=Genbank:WP_000416347.1;Name=WP_000416347.1;end_range=3757,.;gbkey=CDS;gene=valS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=STY7866_RS14095;partial=true;product=valine--tRNA ligase;protein_id=WP_000416347.1;transl_table=11
##sequence-region NZ_CAAR01000361.1 1 6351
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000361.1	RefSeq	region	1	6351	.	+	.	ID=NZ_CAAR01000361.1:1..6351;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000361.1	RefSeq	pseudogene	1	263	.	-	.	ID=gene-STY7866_RS14050;Name=STY7866_RS14050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14050;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000361.1	Protein Homology	CDS	1	263	.	-	0	ID=cds-STY7866_RS14050;Parent=gene-STY7866_RS14050;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454847.1;locus_tag=STY7866_RS14050;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000361.1	RefSeq	gene	443	661	.	+	.	ID=gene-STY7866_RS14055;Name=STY7866_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14055
NZ_CAAR01000361.1	Protein Homology	CDS	443	661	.	+	0	ID=cds-WP_000955207.1;Parent=gene-STY7866_RS14055;Dbxref=Genbank:WP_000955207.1;Name=WP_000955207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454846.1;locus_tag=STY7866_RS14055;product=YaeP family protein;protein_id=WP_000955207.1;transl_table=11
NZ_CAAR01000361.1	RefSeq	gene	648	908	.	+	.	ID=gene-STY7866_RS14060;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=STY7866_RS14060
NZ_CAAR01000361.1	Protein Homology	CDS	648	908	.	+	0	ID=cds-WP_000062330.1;Parent=gene-STY7866_RS14060;Dbxref=Genbank:WP_000062330.1;Name=WP_000062330.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=STY7866_RS14060;product=Rho-binding antiterminator;protein_id=WP_000062330.1;transl_table=11
NZ_CAAR01000361.1	RefSeq	gene	992	2284	.	-	.	ID=gene-STY7866_RS14065;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=STY7866_RS14065
NZ_CAAR01000361.1	Protein Homology	CDS	992	2284	.	-	0	ID=cds-WP_000210062.1;Parent=gene-STY7866_RS14065;Dbxref=Genbank:WP_000210062.1;Name=WP_000210062.1;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454844.1;locus_tag=STY7866_RS14065;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_000210062.1;transl_table=11
NZ_CAAR01000361.1	RefSeq	gene	2347	2736	.	-	.	ID=gene-STY7866_RS14070;Name=STY7866_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14070
NZ_CAAR01000361.1	Protein Homology	CDS	2347	2736	.	-	0	ID=cds-WP_000901086.1;Parent=gene-STY7866_RS14070;Dbxref=Genbank:WP_000901086.1;Name=WP_000901086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454843.1;locus_tag=STY7866_RS14070;product=VOC family protein;protein_id=WP_000901086.1;transl_table=11
NZ_CAAR01000361.1	RefSeq	gene	2792	4933	.	-	.	ID=gene-STY7866_RS14075;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=STY7866_RS14075
NZ_CAAR01000361.1	Protein Homology	CDS	2792	4933	.	-	0	ID=cds-WP_001021059.1;Parent=gene-STY7866_RS14075;Dbxref=Genbank:WP_001021059.1;Name=WP_001021059.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454842.1;locus_tag=STY7866_RS14075;product=lysine decarboxylase LdcC;protein_id=WP_001021059.1;transl_table=11
NZ_CAAR01000361.1	RefSeq	pseudogene	5009	6351	.	-	.	ID=gene-STY7866_RS14080;Name=STY7866_RS14080;end_range=6351,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS14080;partial=true;pseudo=true
NZ_CAAR01000361.1	Protein Homology	CDS	5009	6351	.	-	2	ID=cds-STY7866_RS14080;Parent=gene-STY7866_RS14080;Note=internal stop%3B incomplete%3B missing N-terminus;end_range=6351,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454841.1;locus_tag=STY7866_RS14080;partial=true;product=chitinase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000360.1 1 5158
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000360.1	RefSeq	region	1	5158	.	+	.	ID=NZ_CAAR01000360.1:1..5158;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000360.1	RefSeq	gene	122	2128	.	+	.	ID=gene-STY7866_RS14035;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=STY7866_RS14035
NZ_CAAR01000360.1	Protein Homology	CDS	122	2128	.	+	0	ID=cds-WP_001266353.1;Parent=gene-STY7866_RS14035;Dbxref=Genbank:WP_001266353.1;Name=WP_001266353.1;gbkey=CDS;gene=hmsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=STY7866_RS14035;product=biofilm formation regulator HmsP;protein_id=WP_001266353.1;transl_table=11
NZ_CAAR01000360.1	RefSeq	gene	2286	3572	.	+	.	ID=gene-STY7866_RS14040;Name=STY7866_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14040
NZ_CAAR01000360.1	Protein Homology	CDS	2286	3572	.	+	0	ID=cds-WP_000858232.1;Parent=gene-STY7866_RS14040;Dbxref=Genbank:WP_000858232.1;Name=WP_000858232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458305.1;locus_tag=STY7866_RS14040;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_000858232.1;transl_table=11
NZ_CAAR01000360.1	RefSeq	gene	3792	5158	.	+	.	ID=gene-STY7866_RS14045;Name=STY7866_RS14045;end_range=5158,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14045;partial=true
NZ_CAAR01000360.1	Protein Homology	CDS	3792	5158	.	+	0	ID=cds-WP_001764230.1;Parent=gene-STY7866_RS14045;Dbxref=Genbank:WP_001764230.1;Name=WP_001764230.1;end_range=5158,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458306.1;locus_tag=STY7866_RS14045;partial=true;product=insulinase family protein;protein_id=WP_001764230.1;transl_table=11
##sequence-region NZ_CAAR01000359.1 1 1910
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000359.1	RefSeq	region	1	1910	.	+	.	ID=NZ_CAAR01000359.1:1..1910;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000359.1	RefSeq	gene	1	689	.	+	.	ID=gene-STY7866_RS14020;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=STY7866_RS14020;partial=true;start_range=.,1
NZ_CAAR01000359.1	Protein Homology	CDS	1	689	.	+	2	ID=cds-WP_001764229.1;Parent=gene-STY7866_RS14020;Dbxref=Genbank:WP_001764229.1;Name=WP_001764229.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001597848.1;locus_tag=STY7866_RS14020;partial=true;product=SPI-2 type III secretion system effector SifB;protein_id=WP_001764229.1;start_range=.,1;transl_table=11
NZ_CAAR01000359.1	RefSeq	gene	1018	1248	.	+	.	ID=gene-STY7866_RS14025;Name=STY7866_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14025
NZ_CAAR01000359.1	Protein Homology	CDS	1018	1248	.	+	0	ID=cds-WP_000956438.1;Parent=gene-STY7866_RS14025;Dbxref=Genbank:WP_000956438.1;Name=WP_000956438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455894.1;locus_tag=STY7866_RS14025;product=DUF2554 family protein;protein_id=WP_000956438.1;transl_table=11
NZ_CAAR01000359.1	RefSeq	gene	1249	1910	.	-	.	ID=gene-STY7866_RS14030;Name=STY7866_RS14030;end_range=1910,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14030;partial=true
NZ_CAAR01000359.1	Protein Homology	CDS	1249	1910	.	-	2	ID=cds-WP_000563264.1;Parent=gene-STY7866_RS14030;Dbxref=Genbank:WP_000563264.1;Name=WP_000563264.1;end_range=1910,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455893.1;locus_tag=STY7866_RS14030;partial=true;product=hypothetical protein;protein_id=WP_000563264.1;transl_table=11
##sequence-region NZ_CAAR01000358.1 1 2604
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000358.1	RefSeq	region	1	2604	.	+	.	ID=NZ_CAAR01000358.1:1..2604;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000358.1	RefSeq	gene	1	719	.	+	.	ID=gene-STY7866_RS14005;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=STY7866_RS14005;partial=true;start_range=.,1
NZ_CAAR01000358.1	Protein Homology	CDS	1	719	.	+	2	ID=cds-WP_000607204.1;Parent=gene-STY7866_RS14005;Dbxref=Genbank:WP_000607204.1;Name=WP_000607204.1;gbkey=CDS;gene=preA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=STY7866_RS14005;partial=true;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000607204.1;start_range=.,1;transl_table=11
NZ_CAAR01000358.1	RefSeq	gene	794	1804	.	-	.	ID=gene-STY7866_RS14010;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=STY7866_RS14010
NZ_CAAR01000358.1	Protein Homology	CDS	794	1804	.	-	0	ID=cds-WP_001275103.1;Parent=gene-STY7866_RS14010;Dbxref=Genbank:WP_001275103.1;Name=WP_001275103.1;gbkey=CDS;gene=mglC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=STY7866_RS14010;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275103.1;transl_table=11
NZ_CAAR01000358.1	RefSeq	gene	1820	2604	.	-	.	ID=gene-STY7866_RS14015;Name=STY7866_RS14015;end_range=2604,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14015;partial=true
NZ_CAAR01000358.1	Protein Homology	CDS	1820	2604	.	-	2	ID=cds-WP_000474566.1;Parent=gene-STY7866_RS14015;Dbxref=Genbank:WP_000474566.1;Name=WP_000474566.1;end_range=2604,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461134.1;locus_tag=STY7866_RS14015;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_000474566.1;transl_table=11
##sequence-region NZ_CAAR01000357.1 1 10776
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000357.1	RefSeq	region	1	10776	.	+	.	ID=NZ_CAAR01000357.1:1..10776;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000357.1	RefSeq	pseudogene	1	104	.	-	.	ID=gene-STY7866_RS27415;Name=STY7866_RS27415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27415;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000357.1	Protein Homology	CDS	1	104	.	-	0	ID=cds-STY7866_RS27415;Parent=gene-STY7866_RS27415;Note=scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519378.1;locus_tag=STY7866_RS27415;partial=true;product=MipA/OmpV family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000357.1	RefSeq	gene	452	2386	.	+	.	ID=gene-STY7866_RS13945;Name=STY7866_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13945
NZ_CAAR01000357.1	Protein Homology	CDS	452	2386	.	+	0	ID=cds-WP_001764228.1;Parent=gene-STY7866_RS13945;Dbxref=Genbank:WP_001764228.1;Name=WP_001764228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456226.1;locus_tag=STY7866_RS13945;product=protein kinase YeaG;protein_id=WP_001764228.1;transl_table=11
NZ_CAAR01000357.1	RefSeq	gene	2509	3795	.	+	.	ID=gene-STY7866_RS13950;Name=STY7866_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13950
NZ_CAAR01000357.1	Protein Homology	CDS	2509	3795	.	+	0	ID=cds-WP_000219724.1;Parent=gene-STY7866_RS13950;Dbxref=Genbank:WP_000219724.1;Name=WP_000219724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456227.1;locus_tag=STY7866_RS13950;product=YeaH/YhbH family protein;protein_id=WP_000219724.1;transl_table=11
NZ_CAAR01000357.1	RefSeq	gene	3923	4114	.	-	.	ID=gene-STY7866_RS27420;Name=STY7866_RS27420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27420
NZ_CAAR01000357.1	Protein Homology	CDS	3923	4114	.	-	0	ID=cds-WP_131516884.1;Parent=gene-STY7866_RS27420;Dbxref=Genbank:WP_131516884.1;Name=WP_131516884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531021.1;locus_tag=STY7866_RS27420;product=hypothetical protein;protein_id=WP_131516884.1;transl_table=11
NZ_CAAR01000357.1	RefSeq	gene	4444	4617	.	+	.	ID=gene-STY7866_RS13955;Name=STY7866_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13955
NZ_CAAR01000357.1	Protein Homology	CDS	4444	4617	.	+	0	ID=cds-WP_001048642.1;Parent=gene-STY7866_RS13955;Dbxref=Genbank:WP_001048642.1;Name=WP_001048642.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF17155.2;locus_tag=STY7866_RS13955;product=diguanylate cyclase;protein_id=WP_001048642.1;transl_table=11
NZ_CAAR01000357.1	RefSeq	pseudogene	4636	5935	.	+	.	ID=gene-STY7866_RS13960;Name=STY7866_RS13960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS13960;pseudo=true
NZ_CAAR01000357.1	Protein Homology	CDS	4636	5935	.	+	0	ID=cds-STY7866_RS13960;Parent=gene-STY7866_RS13960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001258703.1;locus_tag=STY7866_RS13960;product=diguanylate cyclase;pseudo=true;transl_table=11
NZ_CAAR01000357.1	RefSeq	gene	5976	6503	.	+	.	ID=gene-STY7866_RS13965;Name=STY7866_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13965
NZ_CAAR01000357.1	Protein Homology	CDS	5976	6503	.	+	0	ID=cds-WP_000829446.1;Parent=gene-STY7866_RS13965;Dbxref=Genbank:WP_000829446.1;Name=WP_000829446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456228.1;locus_tag=STY7866_RS13965;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_000829446.1;transl_table=11
NZ_CAAR01000357.1	RefSeq	gene	6500	6601	.	-	.	ID=gene-STY7866_RS13970;Name=STY7866_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13970
NZ_CAAR01000357.1	Protein Homology	CDS	6500	6601	.	-	0	ID=cds-WP_000272238.1;Parent=gene-STY7866_RS13970;Dbxref=Genbank:WP_000272238.1;Name=WP_000272238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272239.1;locus_tag=STY7866_RS13970;product=hypothetical protein;protein_id=WP_000272238.1;transl_table=11
NZ_CAAR01000357.1	RefSeq	pseudogene	6807	7252	.	+	.	ID=gene-STY7866_RS13975;Name=STY7866_RS13975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS13975;pseudo=true
NZ_CAAR01000357.1	Protein Homology	CDS	6807	7252	.	+	0	ID=cds-STY7866_RS13975;Parent=gene-STY7866_RS13975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456229.1;locus_tag=STY7866_RS13975;product=DUF441 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000357.1	RefSeq	pseudogene	7232	8027	.	-	.	ID=gene-STY7866_RS13980;Name=STY7866_RS13980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS13980;pseudo=true
NZ_CAAR01000357.1	Protein Homology	CDS	7232	8027	.	-	0	ID=cds-STY7866_RS13980;Parent=gene-STY7866_RS13980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456230.1;locus_tag=STY7866_RS13980;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
NZ_CAAR01000357.1	RefSeq	gene	8128	9312	.	+	.	ID=gene-STY7866_RS13985;Name=STY7866_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13985
NZ_CAAR01000357.1	Protein Homology	CDS	8128	9312	.	+	0	ID=cds-WP_000205360.1;Parent=gene-STY7866_RS13985;Dbxref=Genbank:WP_000205360.1;Name=WP_000205360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456231.1;locus_tag=STY7866_RS13985;product=CynX/NimT family MFS transporter;protein_id=WP_000205360.1;transl_table=11
NZ_CAAR01000357.1	RefSeq	gene	9431	9778	.	+	.	ID=gene-STY7866_RS13990;Name=STY7866_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13990
NZ_CAAR01000357.1	Protein Homology	CDS	9431	9778	.	+	0	ID=cds-WP_001222527.1;Parent=gene-STY7866_RS13990;Dbxref=Genbank:WP_001222527.1;Name=WP_001222527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=STY7866_RS13990;product=DUF488 domain-containing protein;protein_id=WP_001222527.1;transl_table=11
NZ_CAAR01000357.1	RefSeq	gene	9764	10075	.	-	.	ID=gene-STY7866_RS13995;Name=STY7866_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13995
NZ_CAAR01000357.1	Protein Homology	CDS	9764	10075	.	-	0	ID=cds-WP_000487129.1;Parent=gene-STY7866_RS13995;Dbxref=Genbank:WP_000487129.1;Name=WP_000487129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456233.1;locus_tag=STY7866_RS13995;product=hypothetical protein;protein_id=WP_000487129.1;transl_table=11
NZ_CAAR01000357.1	RefSeq	gene	10144	10395	.	-	.	ID=gene-STY7866_RS14000;Name=STY7866_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS14000
NZ_CAAR01000357.1	Protein Homology	CDS	10144	10395	.	-	0	ID=cds-WP_000673491.1;Parent=gene-STY7866_RS14000;Dbxref=Genbank:WP_000673491.1;Name=WP_000673491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456234.1;locus_tag=STY7866_RS14000;product=DUF333 domain-containing protein;protein_id=WP_000673491.1;transl_table=11
NZ_CAAR01000357.1	RefSeq	gene	10591	10689	.	+	.	ID=gene-STY7866_RS27425;Name=yoaK;gbkey=Gene;gene=yoaK;gene_biotype=protein_coding;locus_tag=STY7866_RS27425
NZ_CAAR01000357.1	Protein Homology	CDS	10591	10689	.	+	0	ID=cds-WP_024131170.1;Parent=gene-STY7866_RS27425;Dbxref=Genbank:WP_024131170.1;Name=WP_024131170.1;gbkey=CDS;gene=yoaK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=STY7866_RS27425;product=YoaK family small membrane protein;protein_id=WP_024131170.1;transl_table=11
##sequence-region NZ_CAAR01000356.1 1 11661
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000356.1	RefSeq	region	1	11661	.	+	.	ID=NZ_CAAR01000356.1:1..11661;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000356.1	RefSeq	gene	1	1126	.	+	.	ID=gene-STY7866_RS13885;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=STY7866_RS13885;partial=true;start_range=.,1
NZ_CAAR01000356.1	Protein Homology	CDS	1	1126	.	+	1	ID=cds-WP_000585354.1;Parent=gene-STY7866_RS13885;Dbxref=Genbank:WP_000585354.1;Name=WP_000585354.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458638.1;locus_tag=STY7866_RS13885;partial=true;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_000585354.1;start_range=.,1;transl_table=11
NZ_CAAR01000356.1	RefSeq	gene	1128	1376	.	-	.	ID=gene-STY7866_RS27400;Name=STY7866_RS27400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27400
NZ_CAAR01000356.1	Protein Homology	CDS	1128	1376	.	-	0	ID=cds-WP_071524987.1;Parent=gene-STY7866_RS27400;Dbxref=Genbank:WP_071524987.1;Name=WP_071524987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001556493.1;locus_tag=STY7866_RS27400;product=hypothetical protein;protein_id=WP_071524987.1;transl_table=11
NZ_CAAR01000356.1	RefSeq	gene	1474	2625	.	+	.	ID=gene-STY7866_RS13890;Name=STY7866_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13890
NZ_CAAR01000356.1	Protein Homology	CDS	1474	2625	.	+	0	ID=cds-WP_000089603.1;Parent=gene-STY7866_RS13890;Dbxref=Genbank:WP_000089603.1;Name=WP_000089603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458640.1;locus_tag=STY7866_RS13890;product=site-specific integrase;protein_id=WP_000089603.1;transl_table=11
NZ_CAAR01000356.1	RefSeq	gene	2722	3189	.	+	.	ID=gene-STY7866_RS13895;Name=STY7866_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13895
NZ_CAAR01000356.1	Protein Homology	CDS	2722	3189	.	+	0	ID=cds-WP_000455463.1;Parent=gene-STY7866_RS13895;Dbxref=Genbank:WP_000455463.1;Name=WP_000455463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000455463.1;locus_tag=STY7866_RS13895;product=hypothetical protein;protein_id=WP_000455463.1;transl_table=11
NZ_CAAR01000356.1	RefSeq	gene	3401	4276	.	+	.	ID=gene-STY7866_RS13900;Name=STY7866_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13900
NZ_CAAR01000356.1	Protein Homology	CDS	3401	4276	.	+	0	ID=cds-WP_000994659.1;Parent=gene-STY7866_RS13900;Dbxref=Genbank:WP_000994659.1;Name=WP_000994659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458642.1;locus_tag=STY7866_RS13900;product=hypothetical protein;protein_id=WP_000994659.1;transl_table=11
NZ_CAAR01000356.1	RefSeq	gene	4464	4826	.	+	.	ID=gene-STY7866_RS27405;Name=STY7866_RS27405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27405
NZ_CAAR01000356.1	Protein Homology	CDS	4464	4826	.	+	0	ID=cds-WP_001149494.1;Parent=gene-STY7866_RS27405;Dbxref=Genbank:WP_001149494.1;Name=WP_001149494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149494.1;locus_tag=STY7866_RS27405;product=hypothetical protein;protein_id=WP_001149494.1;transl_table=11
NZ_CAAR01000356.1	RefSeq	gene	4783	5697	.	+	.	ID=gene-STY7866_RS13905;Name=STY7866_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13905
NZ_CAAR01000356.1	Protein Homology	CDS	4783	5697	.	+	0	ID=cds-WP_000214158.1;Parent=gene-STY7866_RS13905;Dbxref=Genbank:WP_000214158.1;Name=WP_000214158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458643.1;locus_tag=STY7866_RS13905;product=hypothetical protein;protein_id=WP_000214158.1;transl_table=11
NZ_CAAR01000356.1	RefSeq	gene	5716	6456	.	+	.	ID=gene-STY7866_RS13910;Name=STY7866_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13910
NZ_CAAR01000356.1	Protein Homology	CDS	5716	6456	.	+	0	ID=cds-WP_001768408.1;Parent=gene-STY7866_RS13910;Dbxref=Genbank:WP_001768408.1;Name=WP_001768408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458644.1;locus_tag=STY7866_RS13910;product=TIGR03759 family integrating conjugative element protein;protein_id=WP_001768408.1;transl_table=11
NZ_CAAR01000356.1	RefSeq	gene	6435	7121	.	+	.	ID=gene-STY7866_RS13915;Name=STY7866_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13915
NZ_CAAR01000356.1	Protein Homology	CDS	6435	7121	.	+	0	ID=cds-WP_000013624.1;Parent=gene-STY7866_RS13915;Dbxref=Genbank:WP_000013624.1;Name=WP_000013624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000013624.1;locus_tag=STY7866_RS13915;product=lytic transglycosylase domain-containing protein;protein_id=WP_000013624.1;transl_table=11
NZ_CAAR01000356.1	RefSeq	gene	7157	7657	.	+	.	ID=gene-STY7866_RS13920;Name=STY7866_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13920
NZ_CAAR01000356.1	Protein Homology	CDS	7157	7657	.	+	0	ID=cds-WP_000253629.1;Parent=gene-STY7866_RS13920;Dbxref=Genbank:WP_000253629.1;Name=WP_000253629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253629.1;locus_tag=STY7866_RS13920;product=integrating conjugative element protein;protein_id=WP_000253629.1;transl_table=11
NZ_CAAR01000356.1	RefSeq	gene	7667	8236	.	+	.	ID=gene-STY7866_RS13925;Name=STY7866_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13925
NZ_CAAR01000356.1	Protein Homology	CDS	7667	8236	.	+	0	ID=cds-WP_000626967.1;Parent=gene-STY7866_RS13925;Dbxref=Genbank:WP_000626967.1;Name=WP_000626967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000626967.1;locus_tag=STY7866_RS13925;product=restriction endonuclease;protein_id=WP_000626967.1;transl_table=11
NZ_CAAR01000356.1	RefSeq	pseudogene	8256	10345	.	+	.	ID=gene-STY7866_RS13930;Name=traD;gbkey=Gene;gene=traD;gene_biotype=pseudogene;locus_tag=STY7866_RS13930;pseudo=true
NZ_CAAR01000356.1	Protein Homology	CDS	8256	10345	.	+	0	ID=cds-STY7866_RS13930;Parent=gene-STY7866_RS13930;Note=frameshifted;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458648.1;locus_tag=STY7866_RS13930;product=type IV conjugative transfer system coupling protein TraD;pseudo=true;transl_table=11
NZ_CAAR01000356.1	RefSeq	gene	10342	11100	.	+	.	ID=gene-STY7866_RS13935;Name=STY7866_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13935
NZ_CAAR01000356.1	Protein Homology	CDS	10342	11100	.	+	0	ID=cds-WP_024151068.1;Parent=gene-STY7866_RS13935;Dbxref=Genbank:WP_024151068.1;Name=WP_024151068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458649.1;locus_tag=STY7866_RS13935;product=TIGR03747 family integrating conjugative element membrane protein;protein_id=WP_024151068.1;transl_table=11
NZ_CAAR01000356.1	RefSeq	gene	11318	11590	.	+	.	ID=gene-STY7866_RS13940;Name=STY7866_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13940
NZ_CAAR01000356.1	Protein Homology	CDS	11318	11590	.	+	0	ID=cds-WP_001686573.1;Parent=gene-STY7866_RS13940;Dbxref=Genbank:WP_001686573.1;Name=WP_001686573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458650.1;locus_tag=STY7866_RS13940;product=hypothetical protein;protein_id=WP_001686573.1;transl_table=11
NZ_CAAR01000356.1	RefSeq	pseudogene	11590	11661	.	+	.	ID=gene-STY7866_RS27410;Name=STY7866_RS27410;end_range=11661,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27410;partial=true;pseudo=true
NZ_CAAR01000356.1	Protein Homology	CDS	11590	11661	.	+	0	ID=cds-STY7866_RS27410;Parent=gene-STY7866_RS27410;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=11661,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458651.1;locus_tag=STY7866_RS27410;partial=true;product=TIGR03758 family integrating conjugative element protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000355.1 1 5387
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000355.1	RefSeq	region	1	5387	.	+	.	ID=NZ_CAAR01000355.1:1..5387;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000355.1	RefSeq	gene	127	462	.	-	.	ID=gene-STY7866_RS13850;Name=STY7866_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13850
NZ_CAAR01000355.1	Protein Homology	CDS	127	462	.	-	0	ID=cds-WP_000554312.1;Parent=gene-STY7866_RS13850;Dbxref=Genbank:WP_000554312.1;Name=WP_000554312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=STY7866_RS13850;product=DUF84 family protein;protein_id=WP_000554312.1;transl_table=11
NZ_CAAR01000355.1	RefSeq	gene	509	1156	.	+	.	ID=gene-STY7866_RS13855;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=STY7866_RS13855
NZ_CAAR01000355.1	Protein Homology	CDS	509	1156	.	+	0	ID=cds-WP_000942359.1;Parent=gene-STY7866_RS13855;Dbxref=Genbank:WP_000942359.1;Name=WP_000942359.1;gbkey=CDS;gene=gpmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458992.1;locus_tag=STY7866_RS13855;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942359.1;transl_table=11
NZ_CAAR01000355.1	RefSeq	gene	1153	2022	.	-	.	ID=gene-STY7866_RS13860;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=STY7866_RS13860
NZ_CAAR01000355.1	Protein Homology	CDS	1153	2022	.	-	0	ID=cds-WP_000371679.1;Parent=gene-STY7866_RS13860;Dbxref=Genbank:WP_000371679.1;Name=WP_000371679.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458993.1;locus_tag=STY7866_RS13860;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371679.1;transl_table=11
NZ_CAAR01000355.1	RefSeq	gene	2234	2707	.	+	.	ID=gene-STY7866_RS13865;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=STY7866_RS13865
NZ_CAAR01000355.1	Protein Homology	CDS	2234	2707	.	+	0	ID=cds-WP_000875811.1;Parent=gene-STY7866_RS13865;Dbxref=Genbank:WP_000875811.1;Name=WP_000875811.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458994.1;locus_tag=STY7866_RS13865;product=protein CreA;protein_id=WP_000875811.1;transl_table=11
NZ_CAAR01000355.1	RefSeq	gene	2720	3409	.	+	.	ID=gene-STY7866_RS13870;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=STY7866_RS13870
NZ_CAAR01000355.1	Protein Homology	CDS	2720	3409	.	+	0	ID=cds-WP_001187043.1;Parent=gene-STY7866_RS13870;Dbxref=Genbank:WP_001187043.1;Name=WP_001187043.1;gbkey=CDS;gene=creB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458995.1;locus_tag=STY7866_RS13870;product=two-component system response regulator CreB;protein_id=WP_001187043.1;transl_table=11
NZ_CAAR01000355.1	RefSeq	gene	3409	4833	.	+	.	ID=gene-STY7866_RS13875;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=STY7866_RS13875
NZ_CAAR01000355.1	Protein Homology	CDS	3409	4833	.	+	0	ID=cds-WP_001219536.1;Parent=gene-STY7866_RS13875;Dbxref=Genbank:WP_001219536.1;Name=WP_001219536.1;gbkey=CDS;gene=creC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458996.1;locus_tag=STY7866_RS13875;product=two-component system sensor histidine kinase CreC;protein_id=WP_001219536.1;transl_table=11
NZ_CAAR01000355.1	RefSeq	pseudogene	4891	5387	.	+	.	ID=gene-STY7866_RS13880;Name=STY7866_RS13880;end_range=5387,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS13880;partial=true;pseudo=true
NZ_CAAR01000355.1	Protein Homology	CDS	4891	5387	.	+	0	ID=cds-STY7866_RS13880;Parent=gene-STY7866_RS13880;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5387,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458997.1;locus_tag=STY7866_RS13880;partial=true;product=cell envelope integrity protein CreD;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000354.1 1 1108
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000354.1	RefSeq	region	1	1108	.	+	.	ID=NZ_CAAR01000354.1:1..1108;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000354.1	RefSeq	gene	1	1108	.	+	.	ID=gene-STY7866_RS13845;Name=lptD;end_range=1108,.;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=STY7866_RS13845;partial=true;start_range=.,1
NZ_CAAR01000354.1	Protein Homology	CDS	1	1108	.	+	1	ID=cds-WP_000317368.1;Parent=gene-STY7866_RS13845;Dbxref=Genbank:WP_000317368.1;Name=WP_000317368.1;end_range=1108,.;gbkey=CDS;gene=lptD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454705.1;locus_tag=STY7866_RS13845;partial=true;product=LPS assembly protein LptD;protein_id=WP_000317368.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000353.1 1 8688
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000353.1	RefSeq	region	1	8688	.	+	.	ID=NZ_CAAR01000353.1:1..8688;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000353.1	RefSeq	pseudogene	1	154	.	-	.	ID=gene-STY7866_RS27390;Name=STY7866_RS27390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27390;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000353.1	Protein Homology	CDS	1	154	.	-	0	ID=cds-STY7866_RS27390;Parent=gene-STY7866_RS27390;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531936.1;locus_tag=STY7866_RS27390;partial=true;product=YdcF family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000353.1	RefSeq	pseudogene	119	328	.	+	.	ID=gene-STY7866_RS27395;Name=STY7866_RS27395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27395;partial=true;pseudo=true;start_range=.,119
NZ_CAAR01000353.1	Protein Homology	CDS	119	328	.	+	0	ID=cds-STY7866_RS27395;Parent=gene-STY7866_RS27395;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446563.1;locus_tag=STY7866_RS27395;partial=true;product=hypothetical protein;pseudo=true;start_range=.,119;transl_table=11
NZ_CAAR01000353.1	RefSeq	gene	543	962	.	+	.	ID=gene-STY7866_RS13805;Name=STY7866_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13805
NZ_CAAR01000353.1	Protein Homology	CDS	543	962	.	+	0	ID=cds-WP_001103153.1;Parent=gene-STY7866_RS13805;Dbxref=Genbank:WP_001103153.1;Name=WP_001103153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454712.1;locus_tag=STY7866_RS13805;product=DUF4751 domain-containing protein;protein_id=WP_001103153.1;transl_table=11
NZ_CAAR01000353.1	RefSeq	gene	968	1663	.	-	.	ID=gene-STY7866_RS13810;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=STY7866_RS13810
NZ_CAAR01000353.1	Protein Homology	CDS	968	1663	.	-	0	ID=cds-WP_000888641.1;Parent=gene-STY7866_RS13810;Dbxref=Genbank:WP_000888641.1;Name=WP_000888641.1;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124519.1;locus_tag=STY7866_RS13810;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888641.1;transl_table=11
NZ_CAAR01000353.1	RefSeq	gene	1804	3306	.	-	.	ID=gene-STY7866_RS13815;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=STY7866_RS13815
NZ_CAAR01000353.1	Protein Homology	CDS	1804	3306	.	-	0	ID=cds-WP_000151698.1;Parent=gene-STY7866_RS13815;Dbxref=Genbank:WP_000151698.1;Name=WP_000151698.1;gbkey=CDS;gene=araA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454714.1;locus_tag=STY7866_RS13815;product=L-arabinose isomerase;protein_id=WP_000151698.1;transl_table=11
NZ_CAAR01000353.1	RefSeq	gene	3317	5026	.	-	.	ID=gene-STY7866_RS13820;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=STY7866_RS13820
NZ_CAAR01000353.1	Protein Homology	CDS	3317	5026	.	-	0	ID=cds-WP_000951805.1;Parent=gene-STY7866_RS13820;Dbxref=Genbank:WP_000951805.1;Name=WP_000951805.1;gbkey=CDS;gene=araB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454715.1;locus_tag=STY7866_RS13820;product=ribulokinase;protein_id=WP_000951805.1;transl_table=11
NZ_CAAR01000353.1	RefSeq	gene	5367	6212	.	+	.	ID=gene-STY7866_RS13825;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=STY7866_RS13825
NZ_CAAR01000353.1	Protein Homology	CDS	5367	6212	.	+	0	ID=cds-WP_000852388.1;Parent=gene-STY7866_RS13825;Dbxref=Genbank:WP_000852388.1;Name=WP_000852388.1;gbkey=CDS;gene=araC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454716.1;locus_tag=STY7866_RS13825;product=arabinose operon transcriptional regulator AraC;protein_id=WP_000852388.1;transl_table=11
NZ_CAAR01000353.1	RefSeq	gene	6331	7098	.	+	.	ID=gene-STY7866_RS13830;Name=STY7866_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13830
NZ_CAAR01000353.1	Protein Homology	CDS	6331	7098	.	+	0	ID=cds-WP_001148375.1;Parent=gene-STY7866_RS13830;Dbxref=Genbank:WP_001148375.1;Name=WP_001148375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454717.1;locus_tag=STY7866_RS13830;product=DedA family protein;protein_id=WP_001148375.1;transl_table=11
NZ_CAAR01000353.1	RefSeq	gene	7137	7844	.	-	.	ID=gene-STY7866_RS13835;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=STY7866_RS13835
NZ_CAAR01000353.1	Protein Homology	CDS	7137	7844	.	-	0	ID=cds-WP_000915973.1;Parent=gene-STY7866_RS13835;Dbxref=Genbank:WP_000915973.1;Name=WP_000915973.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454718.1;locus_tag=STY7866_RS13835;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000915973.1;transl_table=11
NZ_CAAR01000353.1	RefSeq	gene	7828	8688	.	-	.	ID=gene-STY7866_RS13840;Name=thiP;end_range=8688,.;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=STY7866_RS13840;partial=true
NZ_CAAR01000353.1	Protein Homology	CDS	7828	8688	.	-	0	ID=cds-WP_000226956.1;Parent=gene-STY7866_RS13840;Dbxref=Genbank:WP_000226956.1;Name=WP_000226956.1;end_range=8688,.;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454719.1;locus_tag=STY7866_RS13840;partial=true;product=thiamine/thiamine pyrophosphate ABC transporter%2C permease protein;protein_id=WP_000226956.1;transl_table=11
##sequence-region NZ_CAAR01000352.1 1 2592
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000352.1	RefSeq	region	1	2592	.	+	.	ID=NZ_CAAR01000352.1:1..2592;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000352.1	RefSeq	gene	1	171	.	-	.	ID=gene-STY7866_RS13790;Name=STY7866_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13790;partial=true;start_range=.,1
NZ_CAAR01000352.1	Protein Homology	CDS	1	171	.	-	0	ID=cds-WP_001764226.1;Parent=gene-STY7866_RS13790;Dbxref=Genbank:WP_001764226.1;Name=WP_001764226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457559.1;locus_tag=STY7866_RS13790;partial=true;product=HIT domain-containing protein;protein_id=WP_001764226.1;start_range=.,1;transl_table=11
NZ_CAAR01000352.1	RefSeq	gene	216	1670	.	-	.	ID=gene-STY7866_RS13795;Name=STY7866_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13795
NZ_CAAR01000352.1	Protein Homology	CDS	216	1670	.	-	0	ID=cds-WP_000818491.1;Parent=gene-STY7866_RS13795;Dbxref=Genbank:WP_000818491.1;Name=WP_000818491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457558.1;locus_tag=STY7866_RS13795;product=DASS family sodium-coupled anion symporter;protein_id=WP_000818491.1;transl_table=11
NZ_CAAR01000352.1	RefSeq	pseudogene	1867	2592	.	-	.	ID=gene-STY7866_RS13800;Name=dkgA;end_range=2592,.;gbkey=Gene;gene=dkgA;gene_biotype=pseudogene;locus_tag=STY7866_RS13800;partial=true;pseudo=true
NZ_CAAR01000352.1	Protein Homology	CDS	1867	2592	.	-	2	ID=cds-STY7866_RS13800;Parent=gene-STY7866_RS13800;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;end_range=2592,.;gbkey=CDS;gene=dkgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=STY7866_RS13800;partial=true;product=2%2C5-didehydrogluconate reductase DkgA;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000351.1 1 4269
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000351.1	RefSeq	region	1	4269	.	+	.	ID=NZ_CAAR01000351.1:1..4269;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000351.1	RefSeq	pseudogene	1	205	.	+	.	ID=gene-STY7866_RS26430;Name=STY7866_RS26430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26430;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000351.1	Protein Homology	CDS	1	205	.	+	1	ID=cds-STY7866_RS26430;Parent=gene-STY7866_RS26430;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457522.1;locus_tag=STY7866_RS26430;partial=true;product=APC family amino acid permease;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000351.1	RefSeq	gene	183	740	.	+	.	ID=gene-STY7866_RS13755;Name=STY7866_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13755
NZ_CAAR01000351.1	Protein Homology	CDS	183	740	.	+	0	ID=cds-WP_000100097.1;Parent=gene-STY7866_RS13755;Dbxref=Genbank:WP_000100097.1;Name=WP_000100097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=STY7866_RS13755;product=DUF3156 family protein;protein_id=WP_000100097.1;transl_table=11
NZ_CAAR01000351.1	RefSeq	gene	845	1528	.	-	.	ID=gene-STY7866_RS13760;Name=STY7866_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13760
NZ_CAAR01000351.1	Protein Homology	CDS	845	1528	.	-	0	ID=cds-WP_001275352.1;Parent=gene-STY7866_RS13760;Dbxref=Genbank:WP_001275352.1;Name=WP_001275352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457520.1;locus_tag=STY7866_RS13760;product=LuxR family transcriptional regulator;protein_id=WP_001275352.1;transl_table=11
NZ_CAAR01000351.1	RefSeq	pseudogene	1846	2045	.	-	.	ID=gene-STY7866_RS27385;Name=STY7866_RS27385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27385;pseudo=true
NZ_CAAR01000351.1	Protein Homology	CDS	1846	2045	.	-	0	ID=cds-STY7866_RS27385;Parent=gene-STY7866_RS27385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493252.1;locus_tag=STY7866_RS27385;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000351.1	RefSeq	gene	2054	2281	.	+	.	ID=gene-STY7866_RS13765;Name=STY7866_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13765
NZ_CAAR01000351.1	Protein Homology	CDS	2054	2281	.	+	0	ID=cds-WP_010989239.1;Parent=gene-STY7866_RS13765;Dbxref=Genbank:WP_010989239.1;Name=WP_010989239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989239.1;locus_tag=STY7866_RS13765;product=hypothetical protein;protein_id=WP_010989239.1;transl_table=11
NZ_CAAR01000351.1	RefSeq	gene	2306	2512	.	-	.	ID=gene-STY7866_RS13770;Name=STY7866_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13770
NZ_CAAR01000351.1	Protein Homology	CDS	2306	2512	.	-	0	ID=cds-WP_000876705.1;Parent=gene-STY7866_RS13770;Dbxref=Genbank:WP_000876705.1;Name=WP_000876705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441070.1;locus_tag=STY7866_RS13770;product=hypothetical protein;protein_id=WP_000876705.1;transl_table=11
NZ_CAAR01000351.1	RefSeq	gene	2962	3588	.	-	.	ID=gene-STY7866_RS13780;Name=STY7866_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13780
NZ_CAAR01000351.1	Protein Homology	CDS	2962	3588	.	-	0	ID=cds-WP_072079429.1;Parent=gene-STY7866_RS13780;Dbxref=Genbank:WP_072079429.1;Name=WP_072079429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457516.1;locus_tag=STY7866_RS13780;product=hypothetical protein;protein_id=WP_072079429.1;transl_table=11
NZ_CAAR01000351.1	RefSeq	gene	3590	4120	.	-	.	ID=gene-STY7866_RS13785;Name=STY7866_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13785
NZ_CAAR01000351.1	Protein Homology	CDS	3590	4120	.	-	0	ID=cds-WP_001766640.1;Parent=gene-STY7866_RS13785;Dbxref=Genbank:WP_001766640.1;Name=WP_001766640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457515.1;locus_tag=STY7866_RS13785;product=DUF943 family protein;protein_id=WP_001766640.1;transl_table=11
##sequence-region NZ_CAAR01000350.1 1 4516
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000350.1	RefSeq	region	1	4516	.	+	.	ID=NZ_CAAR01000350.1:1..4516;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000350.1	RefSeq	gene	1	1412	.	-	.	ID=gene-STY7866_RS13730;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=STY7866_RS13730;partial=true;start_range=.,1
NZ_CAAR01000350.1	Protein Homology	CDS	1	1412	.	-	0	ID=cds-WP_001764223.1;Parent=gene-STY7866_RS13730;Dbxref=Genbank:WP_001764223.1;Name=WP_001764223.1;gbkey=CDS;gene=selB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458244.1;locus_tag=STY7866_RS13730;partial=true;product=selenocysteine-specific translation elongation factor;protein_id=WP_001764223.1;start_range=.,1;transl_table=11
NZ_CAAR01000350.1	RefSeq	gene	1409	2800	.	-	.	ID=gene-STY7866_RS13735;Name=STY7866_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13735
NZ_CAAR01000350.1	Protein Homology	CDS	1409	2800	.	-	0	ID=cds-WP_000200188.1;Parent=gene-STY7866_RS13735;Dbxref=Genbank:WP_000200188.1;Name=WP_000200188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458243.1;locus_tag=STY7866_RS13735;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_000200188.1;transl_table=11
NZ_CAAR01000350.1	RefSeq	gene	2899	3507	.	-	.	ID=gene-STY7866_RS13740;Name=STY7866_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13740
NZ_CAAR01000350.1	Protein Homology	CDS	2899	3507	.	-	0	ID=cds-WP_000766681.1;Parent=gene-STY7866_RS13740;Dbxref=Genbank:WP_000766681.1;Name=WP_000766681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458242.1;locus_tag=STY7866_RS13740;product=glutathione S-transferase;protein_id=WP_000766681.1;transl_table=11
NZ_CAAR01000350.1	RefSeq	gene	3982	4516	.	+	.	ID=gene-STY7866_RS13745;Name=STY7866_RS13745;end_range=4516,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13745;partial=true
NZ_CAAR01000350.1	Protein Homology	CDS	3982	4516	.	+	0	ID=cds-WP_000093282.1;Parent=gene-STY7866_RS13745;Dbxref=Genbank:WP_000093282.1;Name=WP_000093282.1;end_range=4516,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458241.1;locus_tag=STY7866_RS13745;partial=true;product=PTS transporter subunit EIIC;protein_id=WP_000093282.1;transl_table=11
##sequence-region NZ_CAAR01000349.1 1 7177
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000349.1	RefSeq	region	1	7177	.	+	.	ID=NZ_CAAR01000349.1:1..7177;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000349.1	RefSeq	pseudogene	1	396	.	+	.	ID=gene-STY7866_RS13690;Name=STY7866_RS13690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS13690;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000349.1	Protein Homology	CDS	1	396	.	+	1	ID=cds-STY7866_RS13690;Parent=gene-STY7866_RS13690;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456733.1;locus_tag=STY7866_RS13690;partial=true;product=tRNA dihydrouridine(16) synthase DusC;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000349.1	RefSeq	gene	454	537	.	-	.	ID=gene-STY7866_RS27380;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=STY7866_RS27380
NZ_CAAR01000349.1	Protein Homology	CDS	454	537	.	-	0	ID=cds-WP_000698460.1;Parent=gene-STY7866_RS27380;Dbxref=Genbank:WP_000698460.1;Name=WP_000698460.1;gbkey=CDS;gene=yohP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233574.1;locus_tag=STY7866_RS27380;product=protein YohP;protein_id=WP_000698460.1;transl_table=11
NZ_CAAR01000349.1	RefSeq	gene	855	2291	.	+	.	ID=gene-STY7866_RS13700;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=STY7866_RS13700
NZ_CAAR01000349.1	Protein Homology	CDS	855	2291	.	+	0	ID=cds-WP_001081453.1;Parent=gene-STY7866_RS13700;Dbxref=Genbank:WP_001081453.1;Name=WP_001081453.1;gbkey=CDS;gene=mdtQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456731.1;locus_tag=STY7866_RS13700;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001081453.1;transl_table=11
NZ_CAAR01000349.1	RefSeq	gene	2357	3118	.	+	.	ID=gene-STY7866_RS13705;Name=STY7866_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13705
NZ_CAAR01000349.1	Protein Homology	CDS	2357	3118	.	+	0	ID=cds-WP_000169609.1;Parent=gene-STY7866_RS13705;Dbxref=Genbank:WP_000169609.1;Name=WP_000169609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456730.1;locus_tag=STY7866_RS13705;product=SDR family oxidoreductase;protein_id=WP_000169609.1;transl_table=11
NZ_CAAR01000349.1	RefSeq	gene	3166	3762	.	-	.	ID=gene-STY7866_RS13710;Name=STY7866_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13710
NZ_CAAR01000349.1	Protein Homology	CDS	3166	3762	.	-	0	ID=cds-WP_000930540.1;Parent=gene-STY7866_RS13710;Dbxref=Genbank:WP_000930540.1;Name=WP_000930540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456729.1;locus_tag=STY7866_RS13710;product=DedA family protein;protein_id=WP_000930540.1;transl_table=11
NZ_CAAR01000349.1	RefSeq	gene	3894	4481	.	+	.	ID=gene-STY7866_RS13715;Name=STY7866_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13715
NZ_CAAR01000349.1	Protein Homology	CDS	3894	4481	.	+	0	ID=cds-WP_001017057.1;Parent=gene-STY7866_RS13715;Dbxref=Genbank:WP_001017057.1;Name=WP_001017057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456728.1;locus_tag=STY7866_RS13715;product=YIP1 family protein;protein_id=WP_001017057.1;transl_table=11
NZ_CAAR01000349.1	RefSeq	gene	4647	5594	.	+	.	ID=gene-STY7866_RS13720;Name=STY7866_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13720
NZ_CAAR01000349.1	Protein Homology	CDS	4647	5594	.	+	0	ID=cds-WP_000911555.1;Parent=gene-STY7866_RS13720;Dbxref=Genbank:WP_000911555.1;Name=WP_000911555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=STY7866_RS13720;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_000911555.1;transl_table=11
NZ_CAAR01000349.1	RefSeq	gene	5653	7177	.	-	.	ID=gene-STY7866_RS13725;Name=STY7866_RS13725;end_range=7177,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13725;partial=true
NZ_CAAR01000349.1	Protein Homology	CDS	5653	7177	.	-	1	ID=cds-WP_000585877.1;Parent=gene-STY7866_RS13725;Dbxref=Genbank:WP_000585877.1;Name=WP_000585877.1;end_range=7177,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456727.1;locus_tag=STY7866_RS13725;partial=true;product=D-lactate dehydrogenase;protein_id=WP_000585877.1;transl_table=11
##sequence-region NZ_CAAR01000348.1 1 3002
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000348.1	RefSeq	region	1	3002	.	+	.	ID=NZ_CAAR01000348.1:1..3002;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000348.1	RefSeq	gene	1	1025	.	+	.	ID=gene-STY7866_RS13670;Name=STY7866_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13670;partial=true;start_range=.,1
NZ_CAAR01000348.1	Protein Homology	CDS	1	1025	.	+	2	ID=cds-WP_000674933.1;Parent=gene-STY7866_RS13670;Dbxref=Genbank:WP_000674933.1;Name=WP_000674933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456899.1;locus_tag=STY7866_RS13670;partial=true;product=amino acid permease;protein_id=WP_000674933.1;start_range=.,1;transl_table=11
NZ_CAAR01000348.1	RefSeq	gene	1169	1738	.	+	.	ID=gene-STY7866_RS13675;Name=STY7866_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13675
NZ_CAAR01000348.1	Protein Homology	CDS	1169	1738	.	+	0	ID=cds-WP_000825682.1;Parent=gene-STY7866_RS13675;Dbxref=Genbank:WP_000825682.1;Name=WP_000825682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120208.1;locus_tag=STY7866_RS13675;product=UbiX family flavin prenyltransferase;protein_id=WP_000825682.1;transl_table=11
NZ_CAAR01000348.1	RefSeq	gene	2027	2809	.	+	.	ID=gene-STY7866_RS13685;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=STY7866_RS13685
NZ_CAAR01000348.1	Protein Homology	CDS	2027	2809	.	+	0	ID=cds-WP_000754418.1;Parent=gene-STY7866_RS13685;Dbxref=Genbank:WP_000754418.1;Name=WP_000754418.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456897.1;locus_tag=STY7866_RS13685;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000754418.1;transl_table=11
##sequence-region NZ_CAAR01000347.1 1 3011
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000347.1	RefSeq	region	1	3011	.	+	.	ID=NZ_CAAR01000347.1:1..3011;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000347.1	RefSeq	pseudogene	1	717	.	+	.	ID=gene-STY7866_RS13645;Name=actP;gbkey=Gene;gene=actP;gene_biotype=pseudogene;locus_tag=STY7866_RS13645;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000347.1	Protein Homology	CDS	1	717	.	+	0	ID=cds-STY7866_RS13645;Parent=gene-STY7866_RS13645;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=actP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132593.1;locus_tag=STY7866_RS13645;partial=true;product=cation acetate symporter;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000347.1	RefSeq	gene	756	1445	.	-	.	ID=gene-STY7866_RS13650;Name=STY7866_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13650
NZ_CAAR01000347.1	Protein Homology	CDS	756	1445	.	-	0	ID=cds-WP_001067098.1;Parent=gene-STY7866_RS13650;Dbxref=Genbank:WP_001067098.1;Name=WP_001067098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458570.1;locus_tag=STY7866_RS13650;product=LrgB family protein;protein_id=WP_001067098.1;transl_table=11
NZ_CAAR01000347.1	RefSeq	gene	1438	1848	.	-	.	ID=gene-STY7866_RS13655;Name=STY7866_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13655
NZ_CAAR01000347.1	Protein Homology	CDS	1438	1848	.	-	0	ID=cds-WP_000257347.1;Parent=gene-STY7866_RS13655;Dbxref=Genbank:WP_000257347.1;Name=WP_000257347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458569.1;locus_tag=STY7866_RS13655;product=CidA/LrgA family protein;protein_id=WP_000257347.1;transl_table=11
NZ_CAAR01000347.1	RefSeq	gene	1952	2839	.	+	.	ID=gene-STY7866_RS13660;Name=STY7866_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13660
NZ_CAAR01000347.1	Protein Homology	CDS	1952	2839	.	+	0	ID=cds-WP_000354962.1;Parent=gene-STY7866_RS13660;Dbxref=Genbank:WP_000354962.1;Name=WP_000354962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458568.1;locus_tag=STY7866_RS13660;product=LysR family transcriptional regulator;protein_id=WP_000354962.1;transl_table=11
##sequence-region NZ_CAAR01000346.1 1 10408
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000346.1	RefSeq	region	1	10408	.	+	.	ID=NZ_CAAR01000346.1:1..10408;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000346.1	RefSeq	gene	49	390	.	-	.	ID=gene-STY7866_RS13570;Name=STY7866_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13570
NZ_CAAR01000346.1	Protein Homology	CDS	49	390	.	-	0	ID=cds-WP_001194716.1;Parent=gene-STY7866_RS13570;Dbxref=Genbank:WP_001194716.1;Name=WP_001194716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001194716.1;locus_tag=STY7866_RS13570;product=toxin;protein_id=WP_001194716.1;transl_table=11
NZ_CAAR01000346.1	RefSeq	gene	448	813	.	-	.	ID=gene-STY7866_RS13575;Name=STY7866_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13575
NZ_CAAR01000346.1	Protein Homology	CDS	448	813	.	-	0	ID=cds-WP_001181715.1;Parent=gene-STY7866_RS13575;Dbxref=Genbank:WP_001181715.1;Name=WP_001181715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001181715.1;locus_tag=STY7866_RS13575;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_001181715.1;transl_table=11
NZ_CAAR01000346.1	RefSeq	gene	836	1057	.	-	.	ID=gene-STY7866_RS13580;Name=STY7866_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13580
NZ_CAAR01000346.1	Protein Homology	CDS	836	1057	.	-	0	ID=cds-WP_000691982.1;Parent=gene-STY7866_RS13580;Dbxref=Genbank:WP_000691982.1;Name=WP_000691982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004590745.1;locus_tag=STY7866_RS13580;product=DUF987 domain-containing protein;protein_id=WP_000691982.1;transl_table=11
NZ_CAAR01000346.1	RefSeq	gene	1071	1550	.	-	.	ID=gene-STY7866_RS13585;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=STY7866_RS13585
NZ_CAAR01000346.1	Protein Homology	CDS	1071	1550	.	-	0	ID=cds-WP_000437751.1;Parent=gene-STY7866_RS13585;Dbxref=Genbank:WP_000437751.1;Name=WP_000437751.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000437751.1;locus_tag=STY7866_RS13585;product=DNA repair protein RadC;protein_id=WP_000437751.1;transl_table=11
NZ_CAAR01000346.1	RefSeq	gene	1562	2038	.	-	.	ID=gene-STY7866_RS13590;Name=STY7866_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13590
NZ_CAAR01000346.1	Protein Homology	CDS	1562	2038	.	-	0	ID=cds-WP_001059754.1;Parent=gene-STY7866_RS13590;Dbxref=Genbank:WP_001059754.1;Name=WP_001059754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004590747.1;locus_tag=STY7866_RS13590;product=antirestriction protein;protein_id=WP_001059754.1;transl_table=11
NZ_CAAR01000346.1	RefSeq	gene	2035	2298	.	-	.	ID=gene-STY7866_RS27375;Name=STY7866_RS27375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27375
NZ_CAAR01000346.1	Protein Homology	CDS	2035	2298	.	-	0	ID=cds-WP_001149870.1;Parent=gene-STY7866_RS27375;Dbxref=Genbank:WP_001149870.1;Name=WP_001149870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149870.1;locus_tag=STY7866_RS27375;product=hypothetical protein;protein_id=WP_001149870.1;transl_table=11
NZ_CAAR01000346.1	RefSeq	gene	2298	3116	.	-	.	ID=gene-STY7866_RS13595;Name=STY7866_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13595
NZ_CAAR01000346.1	Protein Homology	CDS	2298	3116	.	-	0	ID=cds-WP_001234374.1;Parent=gene-STY7866_RS13595;Dbxref=Genbank:WP_001234374.1;Name=WP_001234374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234374.1;locus_tag=STY7866_RS13595;product=DUF945 domain-containing protein;protein_id=WP_001234374.1;transl_table=11
NZ_CAAR01000346.1	RefSeq	pseudogene	3232	3482	.	-	.	ID=gene-STY7866_RS13600;Name=STY7866_RS13600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS13600;pseudo=true
NZ_CAAR01000346.1	Protein Homology	CDS	3232	3482	.	-	0	ID=cds-STY7866_RS13600;Parent=gene-STY7866_RS13600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015370129.1;locus_tag=STY7866_RS13600;product=DUF905 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000346.1	RefSeq	gene	3673	4140	.	-	.	ID=gene-STY7866_RS13605;Name=STY7866_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13605
NZ_CAAR01000346.1	Protein Homology	CDS	3673	4140	.	-	0	ID=cds-WP_000727137.1;Parent=gene-STY7866_RS13605;Dbxref=Genbank:WP_000727137.1;Name=WP_000727137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000727137.1;locus_tag=STY7866_RS13605;product=hypothetical protein;protein_id=WP_000727137.1;transl_table=11
NZ_CAAR01000346.1	RefSeq	gene	4237	4638	.	-	.	ID=gene-STY7866_RS13610;Name=STY7866_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13610
NZ_CAAR01000346.1	Protein Homology	CDS	4237	4638	.	-	0	ID=cds-WP_000819262.1;Parent=gene-STY7866_RS13610;Dbxref=Genbank:WP_000819262.1;Name=WP_000819262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000819262.1;locus_tag=STY7866_RS13610;product=hypothetical protein;protein_id=WP_000819262.1;transl_table=11
NZ_CAAR01000346.1	RefSeq	gene	4844	5731	.	-	.	ID=gene-STY7866_RS13615;Name=STY7866_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13615
NZ_CAAR01000346.1	Protein Homology	CDS	4844	5731	.	-	0	ID=cds-WP_000682561.1;Parent=gene-STY7866_RS13615;Dbxref=Genbank:WP_000682561.1;Name=WP_000682561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000682561.1;locus_tag=STY7866_RS13615;product=hypothetical protein;protein_id=WP_000682561.1;transl_table=11
NZ_CAAR01000346.1	RefSeq	gene	5899	7002	.	-	.	ID=gene-STY7866_RS13620;Name=STY7866_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13620
NZ_CAAR01000346.1	Protein Homology	CDS	5899	7002	.	-	0	ID=cds-WP_001250503.1;Parent=gene-STY7866_RS13620;Dbxref=Genbank:WP_001250503.1;Name=WP_001250503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078275.1;locus_tag=STY7866_RS13620;product=hypothetical protein;protein_id=WP_001250503.1;transl_table=11
NZ_CAAR01000346.1	RefSeq	gene	8202	8777	.	+	.	ID=gene-STY7866_RS13625;Name=STY7866_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13625
NZ_CAAR01000346.1	Protein Homology	CDS	8202	8777	.	+	0	ID=cds-WP_000456945.1;Parent=gene-STY7866_RS13625;Dbxref=Genbank:WP_000456945.1;Name=WP_000456945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078274.1;locus_tag=STY7866_RS13625;product=inovirus-type Gp2 protein;protein_id=WP_000456945.1;transl_table=11
NZ_CAAR01000346.1	RefSeq	gene	8880	9086	.	+	.	ID=gene-STY7866_RS13630;Name=STY7866_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13630
NZ_CAAR01000346.1	Protein Homology	CDS	8880	9086	.	+	0	ID=cds-WP_000211143.1;Parent=gene-STY7866_RS13630;Dbxref=Genbank:WP_000211143.1;Name=WP_000211143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004590757.1;locus_tag=STY7866_RS13630;product=AlpA family transcriptional regulator;protein_id=WP_000211143.1;transl_table=11
NZ_CAAR01000346.1	RefSeq	gene	9617	10003	.	+	.	ID=gene-STY7866_RS13635;Name=STY7866_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13635
NZ_CAAR01000346.1	Protein Homology	CDS	9617	10003	.	+	0	ID=cds-WP_001160600.1;Parent=gene-STY7866_RS13635;Dbxref=Genbank:WP_001160600.1;Name=WP_001160600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078273.1;locus_tag=STY7866_RS13635;product=hypothetical protein;protein_id=WP_001160600.1;transl_table=11
##sequence-region NZ_CAAR01000345.1 1 2193
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000345.1	RefSeq	region	1	2193	.	+	.	ID=NZ_CAAR01000345.1:1..2193;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000345.1	RefSeq	gene	82	678	.	-	.	ID=gene-STY7866_RS13550;Name=STY7866_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13550
NZ_CAAR01000345.1	Protein Homology	CDS	82	678	.	-	0	ID=cds-WP_000173549.1;Parent=gene-STY7866_RS13550;Dbxref=Genbank:WP_000173549.1;Name=WP_000173549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000173549.1;locus_tag=STY7866_RS13550;product=TIGR02646 family protein;protein_id=WP_000173549.1;transl_table=11
NZ_CAAR01000345.1	RefSeq	gene	1239	1583	.	+	.	ID=gene-STY7866_RS13560;Name=STY7866_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13560
NZ_CAAR01000345.1	Protein Homology	CDS	1239	1583	.	+	0	ID=cds-WP_000120781.1;Parent=gene-STY7866_RS13560;Dbxref=Genbank:WP_000120781.1;Name=WP_000120781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462651.1;locus_tag=STY7866_RS13560;product=hypothetical protein;protein_id=WP_000120781.1;transl_table=11
NZ_CAAR01000345.1	RefSeq	gene	1903	1997	.	-	.	ID=gene-STY7866_RS13565;Name=STY7866_RS13565;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS13565
NZ_CAAR01000345.1	tRNAscan-SE	tRNA	1903	1997	.	-	.	ID=rna-STY7866_RS13565;Parent=gene-STY7866_RS13565;anticodon=(pos:complement(1961..1963));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS13565;product=tRNA-Sec
NZ_CAAR01000345.1	tRNAscan-SE	exon	1903	1997	.	-	.	ID=exon-STY7866_RS13565-1;Parent=rna-STY7866_RS13565;anticodon=(pos:complement(1961..1963));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS13565;product=tRNA-Sec
##sequence-region NZ_CAAR01000344.1 1 175
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000344.1	RefSeq	region	1	175	.	+	.	ID=NZ_CAAR01000344.1:1..175;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000343.1 1 941
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000343.1	RefSeq	region	1	941	.	+	.	ID=NZ_CAAR01000343.1:1..941;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000343.1	RefSeq	pseudogene	1	468	.	-	.	ID=gene-STY7866_RS13540;Name=STY7866_RS13540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS13540;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000343.1	Protein Homology	CDS	1	468	.	-	0	ID=cds-STY7866_RS13540;Parent=gene-STY7866_RS13540;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389730.1;locus_tag=STY7866_RS13540;partial=true;product=hydroxyacid dehydrogenase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000343.1	RefSeq	pseudogene	575	941	.	-	.	ID=gene-STY7866_RS13545;Name=STY7866_RS13545;end_range=941,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS13545;partial=true;pseudo=true;start_range=.,575
NZ_CAAR01000343.1	Protein Homology	CDS	575	941	.	-	1	ID=cds-STY7866_RS13545;Parent=gene-STY7866_RS13545;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=941,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192753.1;locus_tag=STY7866_RS13545;partial=true;product=DUF4942 domain-containing protein;pseudo=true;start_range=.,575;transl_table=11
##sequence-region NZ_CAAR01000342.1 1 3232
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000342.1	RefSeq	region	1	3232	.	+	.	ID=NZ_CAAR01000342.1:1..3232;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000342.1	RefSeq	gene	1	385	.	+	.	ID=gene-STY7866_RS13505;Name=STY7866_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13505;partial=true;start_range=.,1
NZ_CAAR01000342.1	Protein Homology	CDS	1	385	.	+	1	ID=cds-WP_000321266.1;Parent=gene-STY7866_RS13505;Dbxref=Genbank:WP_000321266.1;Name=WP_000321266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227719.1;locus_tag=STY7866_RS13505;partial=true;product=DUF4942 domain-containing protein;protein_id=WP_000321266.1;start_range=.,1;transl_table=11
NZ_CAAR01000342.1	RefSeq	gene	452	700	.	+	.	ID=gene-STY7866_RS13510;Name=STY7866_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13510
NZ_CAAR01000342.1	Protein Homology	CDS	452	700	.	+	0	ID=cds-WP_000535213.1;Parent=gene-STY7866_RS13510;Dbxref=Genbank:WP_000535213.1;Name=WP_000535213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155191.1;locus_tag=STY7866_RS13510;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_000535213.1;transl_table=11
NZ_CAAR01000342.1	RefSeq	pseudogene	704	979	.	+	.	ID=gene-STY7866_RS27355;Name=STY7866_RS27355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27355;pseudo=true
NZ_CAAR01000342.1	Protein Homology	CDS	704	979	.	+	0	ID=cds-STY7866_RS27355;Parent=gene-STY7866_RS27355;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012015892.1;locus_tag=STY7866_RS27355;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11
NZ_CAAR01000342.1	RefSeq	gene	1094	1891	.	+	.	ID=gene-STY7866_RS13515;Name=STY7866_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13515
NZ_CAAR01000342.1	Protein Homology	CDS	1094	1891	.	+	0	ID=cds-WP_000940052.1;Parent=gene-STY7866_RS13515;Dbxref=Genbank:WP_000940052.1;Name=WP_000940052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837283.1;locus_tag=STY7866_RS13515;product=helix-turn-helix transcriptional regulator;protein_id=WP_000940052.1;transl_table=11
NZ_CAAR01000342.1	RefSeq	pseudogene	2212	2352	.	+	.	ID=gene-STY7866_RS27360;Name=STY7866_RS27360;end_range=2352,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27360;partial=true;pseudo=true
NZ_CAAR01000342.1	Protein Homology	CDS	2212	2352	.	+	0	ID=cds-STY7866_RS27360;Parent=gene-STY7866_RS27360;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2352,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007705337.1;locus_tag=STY7866_RS27360;partial=true;product=DUF4102 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000342.1	RefSeq	pseudogene	2384	3232	.	-	.	ID=gene-STY7866_RS27365;Name=STY7866_RS27365;end_range=3232,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27365;partial=true;pseudo=true
NZ_CAAR01000342.1	Protein Homology	CDS	2384	3232	.	-	0	ID=cds-STY7866_RS27365;Parent=gene-STY7866_RS27365;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=3232,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=STY7866_RS27365;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000341.1 1 159
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000341.1	RefSeq	region	1	159	.	+	.	ID=NZ_CAAR01000341.1:1..159;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000340.1 1 620
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000340.1	RefSeq	region	1	620	.	+	.	ID=NZ_CAAR01000340.1:1..620;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000340.1	RefSeq	gene	101	620	.	+	.	ID=gene-STY7866_RS13500;Name=STY7866_RS13500;end_range=620,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13500;partial=true
NZ_CAAR01000340.1	Protein Homology	CDS	101	620	.	+	0	ID=cds-WP_000028215.1;Parent=gene-STY7866_RS13500;Dbxref=Genbank:WP_000028215.1;Name=WP_000028215.1;end_range=620,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456613.1;locus_tag=STY7866_RS13500;partial=true;product=molybdopterin-dependent oxidoreductase;protein_id=WP_000028215.1;transl_table=11
##sequence-region NZ_CAAR01000339.1 1 15562
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000339.1	RefSeq	region	1	15562	.	+	.	ID=NZ_CAAR01000339.1:1..15562;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000339.1	RefSeq	gene	1	470	.	+	.	ID=gene-STY7866_RS13410;Name=STY7866_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13410;partial=true;start_range=.,1
NZ_CAAR01000339.1	Protein Homology	CDS	1	470	.	+	2	ID=cds-WP_000506712.1;Parent=gene-STY7866_RS13410;Dbxref=Genbank:WP_000506712.1;Name=WP_000506712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457615.1;locus_tag=STY7866_RS13410;partial=true;product=DedA family protein;protein_id=WP_000506712.1;start_range=.,1;transl_table=11
NZ_CAAR01000339.1	RefSeq	gene	474	857	.	+	.	ID=gene-STY7866_RS13415;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=STY7866_RS13415
NZ_CAAR01000339.1	Protein Homology	CDS	474	857	.	+	0	ID=cds-WP_000917516.1;Parent=gene-STY7866_RS13415;Dbxref=Genbank:WP_000917516.1;Name=WP_000917516.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457616.1;locus_tag=STY7866_RS13415;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_000917516.1;transl_table=11
NZ_CAAR01000339.1	RefSeq	gene	1002	1370	.	+	.	ID=gene-STY7866_RS13420;Name=STY7866_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13420
NZ_CAAR01000339.1	Protein Homology	CDS	1002	1370	.	+	0	ID=cds-WP_000877297.1;Parent=gene-STY7866_RS13420;Dbxref=Genbank:WP_000877297.1;Name=WP_000877297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457617.1;locus_tag=STY7866_RS13420;product=DUF1090 domain-containing protein;protein_id=WP_000877297.1;transl_table=11
NZ_CAAR01000339.1	RefSeq	gene	1412	1717	.	+	.	ID=gene-STY7866_RS13425;Name=STY7866_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13425
NZ_CAAR01000339.1	Protein Homology	CDS	1412	1717	.	+	0	ID=cds-WP_000031219.1;Parent=gene-STY7866_RS13425;Dbxref=Genbank:WP_000031219.1;Name=WP_000031219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457618.1;locus_tag=STY7866_RS13425;product=DUF883 domain-containing protein;protein_id=WP_000031219.1;transl_table=11
NZ_CAAR01000339.1	RefSeq	gene	1720	2118	.	+	.	ID=gene-STY7866_RS13430;Name=STY7866_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13430
NZ_CAAR01000339.1	Protein Homology	CDS	1720	2118	.	+	0	ID=cds-WP_000785626.1;Parent=gene-STY7866_RS13430;Dbxref=Genbank:WP_000785626.1;Name=WP_000785626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457619.1;locus_tag=STY7866_RS13430;product=membrane protein;protein_id=WP_000785626.1;transl_table=11
NZ_CAAR01000339.1	RefSeq	gene	2152	2415	.	+	.	ID=gene-STY7866_RS13435;Name=STY7866_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13435
NZ_CAAR01000339.1	Protein Homology	CDS	2152	2415	.	+	0	ID=cds-WP_049783581.1;Parent=gene-STY7866_RS13435;Dbxref=Genbank:WP_049783581.1;Name=WP_049783581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000015588.1;locus_tag=STY7866_RS13435;product=hypothetical protein;protein_id=WP_049783581.1;transl_table=11
NZ_CAAR01000339.1	RefSeq	gene	2570	3055	.	+	.	ID=gene-STY7866_RS13440;Name=STY7866_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13440
NZ_CAAR01000339.1	Protein Homology	CDS	2570	3055	.	+	0	ID=cds-WP_000603910.1;Parent=gene-STY7866_RS13440;Dbxref=Genbank:WP_000603910.1;Name=WP_000603910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457621.1;locus_tag=STY7866_RS13440;product=DoxX family protein;protein_id=WP_000603910.1;transl_table=11
NZ_CAAR01000339.1	RefSeq	gene	3123	4109	.	+	.	ID=gene-STY7866_RS13445;Name=STY7866_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13445
NZ_CAAR01000339.1	Protein Homology	CDS	3123	4109	.	+	0	ID=cds-WP_000531164.1;Parent=gene-STY7866_RS13445;Dbxref=Genbank:WP_000531164.1;Name=WP_000531164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457622.1;locus_tag=STY7866_RS13445;product=glutathione S-transferase family protein;protein_id=WP_000531164.1;transl_table=11
NZ_CAAR01000339.1	RefSeq	gene	4233	4598	.	+	.	ID=gene-STY7866_RS13450;Name=STY7866_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13450
NZ_CAAR01000339.1	Protein Homology	CDS	4233	4598	.	+	0	ID=cds-WP_000384139.1;Parent=gene-STY7866_RS13450;Dbxref=Genbank:WP_000384139.1;Name=WP_000384139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457623.1;locus_tag=STY7866_RS13450;product=DUF805 domain-containing protein;protein_id=WP_000384139.1;transl_table=11
NZ_CAAR01000339.1	RefSeq	gene	4637	5533	.	-	.	ID=gene-STY7866_RS13455;Name=STY7866_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13455
NZ_CAAR01000339.1	Protein Homology	CDS	4637	5533	.	-	0	ID=cds-WP_001041028.1;Parent=gene-STY7866_RS13455;Dbxref=Genbank:WP_001041028.1;Name=WP_001041028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457624.1;locus_tag=STY7866_RS13455;product=LysR family transcriptional regulator;protein_id=WP_001041028.1;transl_table=11
NZ_CAAR01000339.1	RefSeq	gene	5638	6336	.	+	.	ID=gene-STY7866_RS13460;Name=STY7866_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13460
NZ_CAAR01000339.1	Protein Homology	CDS	5638	6336	.	+	0	ID=cds-WP_000633546.1;Parent=gene-STY7866_RS13460;Dbxref=Genbank:WP_000633546.1;Name=WP_000633546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457625.1;locus_tag=STY7866_RS13460;product=pirin family protein;protein_id=WP_000633546.1;transl_table=11
NZ_CAAR01000339.1	RefSeq	gene	6360	6524	.	+	.	ID=gene-STY7866_RS13465;Name=STY7866_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13465
NZ_CAAR01000339.1	Protein Homology	CDS	6360	6524	.	+	0	ID=cds-WP_000039324.1;Parent=gene-STY7866_RS13465;Dbxref=Genbank:WP_000039324.1;Name=WP_000039324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457626.1;locus_tag=STY7866_RS13465;product=hypothetical protein;protein_id=WP_000039324.1;transl_table=11
NZ_CAAR01000339.1	RefSeq	gene	6637	7947	.	-	.	ID=gene-STY7866_RS13470;Name=STY7866_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13470
NZ_CAAR01000339.1	Protein Homology	CDS	6637	7947	.	-	0	ID=cds-WP_000463069.1;Parent=gene-STY7866_RS13470;Dbxref=Genbank:WP_000463069.1;Name=WP_000463069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457627.1;locus_tag=STY7866_RS13470;product=serine dehydratase subunit alpha family protein;protein_id=WP_000463069.1;transl_table=11
NZ_CAAR01000339.1	RefSeq	pseudogene	7973	9118	.	-	.	ID=gene-STY7866_RS13475;Name=STY7866_RS13475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS13475;pseudo=true
NZ_CAAR01000339.1	Protein Homology	CDS	7973	9118	.	-	0	ID=cds-STY7866_RS13475;Parent=gene-STY7866_RS13475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005043673.1;locus_tag=STY7866_RS13475;product=transporter;pseudo=true;transl_table=11
NZ_CAAR01000339.1	RefSeq	gene	9128	9304	.	-	.	ID=gene-STY7866_RS27345;Name=STY7866_RS27345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27345
NZ_CAAR01000339.1	GeneMarkS-2+	CDS	9128	9304	.	-	0	ID=cds-WP_001751454.1;Parent=gene-STY7866_RS27345;Dbxref=Genbank:WP_001751454.1;Name=WP_001751454.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=STY7866_RS27345;product=hypothetical protein;protein_id=WP_001751454.1;transl_table=11
NZ_CAAR01000339.1	RefSeq	gene	9619	10983	.	-	.	ID=gene-STY7866_RS13480;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=STY7866_RS13480
NZ_CAAR01000339.1	Protein Homology	CDS	9619	10983	.	-	0	ID=cds-WP_000622070.1;Parent=gene-STY7866_RS13480;Dbxref=Genbank:WP_000622070.1;Name=WP_000622070.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457628.1;locus_tag=STY7866_RS13480;product=L-serine ammonia-lyase;protein_id=WP_000622070.1;transl_table=11
NZ_CAAR01000339.1	RefSeq	gene	11053	13347	.	-	.	ID=gene-STY7866_RS13485;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=STY7866_RS13485
NZ_CAAR01000339.1	Protein Homology	CDS	11053	13347	.	-	0	ID=cds-WP_000867312.1;Parent=gene-STY7866_RS13485;Dbxref=Genbank:WP_000867312.1;Name=WP_000867312.1;gbkey=CDS;gene=pflB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457629.1;locus_tag=STY7866_RS13485;product=formate C-acetyltransferase;protein_id=WP_000867312.1;transl_table=11
NZ_CAAR01000339.1	RefSeq	gene	13381	14589	.	-	.	ID=gene-STY7866_RS13490;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=STY7866_RS13490
NZ_CAAR01000339.1	Protein Homology	CDS	13381	14589	.	-	0	ID=cds-WP_001001859.1;Parent=gene-STY7866_RS13490;Dbxref=Genbank:WP_001001859.1;Name=WP_001001859.1;gbkey=CDS;gene=tdcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457630.1;locus_tag=STY7866_RS13490;product=propionate kinase;protein_id=WP_001001859.1;transl_table=11
NZ_CAAR01000339.1	RefSeq	pseudogene	14656	15562	.	-	.	ID=gene-STY7866_RS13495;Name=tdcC;end_range=15562,.;gbkey=Gene;gene=tdcC;gene_biotype=pseudogene;locus_tag=STY7866_RS13495;partial=true;pseudo=true
NZ_CAAR01000339.1	Protein Homology	CDS	14656	15562	.	-	2	ID=cds-STY7866_RS13495;Parent=gene-STY7866_RS13495;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=15562,.;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=STY7866_RS13495;partial=true;product=threonine/serine transporter TdcC;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000338.1 1 3137
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000338.1	RefSeq	region	1	3137	.	+	.	ID=NZ_CAAR01000338.1:1..3137;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000338.1	RefSeq	gene	74	952	.	-	.	ID=gene-STY7866_RS13390;Name=STY7866_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13390
NZ_CAAR01000338.1	Protein Homology	CDS	74	952	.	-	0	ID=cds-WP_001278615.1;Parent=gene-STY7866_RS13390;Dbxref=Genbank:WP_001278615.1;Name=WP_001278615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455236.1;locus_tag=STY7866_RS13390;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278615.1;transl_table=11
NZ_CAAR01000338.1	RefSeq	pseudogene	1110	1582	.	-	.	ID=gene-STY7866_RS13395;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=pseudogene;locus_tag=STY7866_RS13395;pseudo=true
NZ_CAAR01000338.1	Protein Homology	CDS	1110	1582	.	-	0	ID=cds-STY7866_RS13395;Parent=gene-STY7866_RS13395;Note=frameshifted;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455237.1;locus_tag=STY7866_RS13395;product=rRNA maturation RNase YbeY;pseudo=true;transl_table=11
NZ_CAAR01000338.1	RefSeq	gene	1579	2664	.	-	.	ID=gene-STY7866_RS13400;Name=STY7866_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13400
NZ_CAAR01000338.1	Protein Homology	CDS	1579	2664	.	-	0	ID=cds-WP_000493272.1;Parent=gene-STY7866_RS13400;Dbxref=Genbank:WP_000493272.1;Name=WP_000493272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455238.1;locus_tag=STY7866_RS13400;product=PhoH family protein;protein_id=WP_000493272.1;transl_table=11
NZ_CAAR01000338.1	RefSeq	gene	2830	3137	.	-	.	ID=gene-STY7866_RS13405;Name=STY7866_RS13405;end_range=3137,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13405;partial=true
NZ_CAAR01000338.1	Protein Homology	CDS	2830	3137	.	-	2	ID=cds-WP_000312588.1;Parent=gene-STY7866_RS13405;Dbxref=Genbank:WP_000312588.1;Name=WP_000312588.1;end_range=3137,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=STY7866_RS13405;partial=true;product=TRAM domain-containing protein;protein_id=WP_000312588.1;transl_table=11
##sequence-region NZ_CAAR01000337.1 1 3199
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000337.1	RefSeq	region	1	3199	.	+	.	ID=NZ_CAAR01000337.1:1..3199;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000337.1	RefSeq	gene	43	960	.	+	.	ID=gene-STY7866_RS13370;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=STY7866_RS13370
NZ_CAAR01000337.1	Protein Homology	CDS	43	960	.	+	0	ID=cds-WP_001025919.1;Parent=gene-STY7866_RS13370;Dbxref=Genbank:WP_001025919.1;Name=WP_001025919.1;gbkey=CDS;gene=oxyR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=STY7866_RS13370;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025919.1;transl_table=11
NZ_CAAR01000337.1	RefSeq	pseudogene	943	2344	.	-	.	ID=gene-STY7866_RS13375;Name=STY7866_RS13375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS13375;pseudo=true
NZ_CAAR01000337.1	Protein Homology	CDS	943	2344	.	-	0	ID=cds-STY7866_RS13375;Parent=gene-STY7866_RS13375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457934.1;locus_tag=STY7866_RS13375;product=Si-specific NAD(P)(+) transhydrogenase;pseudo=true;transl_table=11
NZ_CAAR01000337.1	RefSeq	gene	2543	3178	.	+	.	ID=gene-STY7866_RS13380;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=STY7866_RS13380
NZ_CAAR01000337.1	Protein Homology	CDS	2543	3178	.	+	0	ID=cds-WP_000971958.1;Parent=gene-STY7866_RS13380;Dbxref=Genbank:WP_000971958.1;Name=WP_000971958.1;gbkey=CDS;gene=fabR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457933.1;locus_tag=STY7866_RS13380;product=HTH-type transcriptional repressor FabR;protein_id=WP_000971958.1;transl_table=11
##sequence-region NZ_CAAR01000336.1 1 18507
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000336.1	RefSeq	region	1	18507	.	+	.	ID=NZ_CAAR01000336.1:1..18507;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000336.1	RefSeq	gene	1	519	.	+	.	ID=gene-STY7866_RS13305;Name=sefB;gbkey=Gene;gene=sefB;gene_biotype=protein_coding;locus_tag=STY7866_RS13305;partial=true;start_range=.,1
NZ_CAAR01000336.1	Protein Homology	CDS	1	519	.	+	0	ID=cds-WP_000607099.1;Parent=gene-STY7866_RS13305;Dbxref=Genbank:WP_000607099.1;Name=WP_000607099.1;gbkey=CDS;gene=sefB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458913.1;locus_tag=STY7866_RS13305;partial=true;product=fimbrial chaperone SefB;protein_id=WP_000607099.1;start_range=.,1;transl_table=11
NZ_CAAR01000336.1	RefSeq	pseudogene	524	2997	.	+	.	ID=gene-STY7866_RS13310;Name=sefC;gbkey=Gene;gene=sefC;gene_biotype=pseudogene;locus_tag=STY7866_RS13310;pseudo=true
NZ_CAAR01000336.1	Protein Homology	CDS	524	2997	.	+	0	ID=cds-STY7866_RS13310;Parent=gene-STY7866_RS13310;Note=frameshifted;gbkey=CDS;gene=sefC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458914.1;locus_tag=STY7866_RS13310;product=outer membrane fimbrial usher protein SefC;pseudo=true;transl_table=11
NZ_CAAR01000336.1	RefSeq	pseudogene	2994	3439	.	+	.	ID=gene-STY7866_RS27320;Name=STY7866_RS27320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27320;pseudo=true
NZ_CAAR01000336.1	Protein Homology	CDS	2994	3439	.	+	0	ID=cds-STY7866_RS27320;Parent=gene-STY7866_RS27320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001077813.1;locus_tag=STY7866_RS27320;product=adhesin;pseudo=true;transl_table=11
NZ_CAAR01000336.1	RefSeq	gene	3473	4117	.	-	.	ID=gene-STY7866_RS27325;Name=STY7866_RS27325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27325
NZ_CAAR01000336.1	Protein Homology	CDS	3473	4117	.	-	0	ID=cds-WP_001681529.1;Parent=gene-STY7866_RS27325;Dbxref=Genbank:WP_001681529.1;Name=WP_001681529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001706075.1;locus_tag=STY7866_RS27325;product=AraC family transcriptional regulator;protein_id=WP_001681529.1;transl_table=11
NZ_CAAR01000336.1	RefSeq	gene	4141	4287	.	-	.	ID=gene-STY7866_RS27330;Name=STY7866_RS27330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27330
NZ_CAAR01000336.1	Protein Homology	CDS	4141	4287	.	-	0	ID=cds-WP_001764209.1;Parent=gene-STY7866_RS27330;Dbxref=Genbank:WP_001764209.1;Name=WP_001764209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764209.1;locus_tag=STY7866_RS27330;product=hypothetical protein;protein_id=WP_001764209.1;transl_table=11
NZ_CAAR01000336.1	RefSeq	gene	4864	5073	.	+	.	ID=gene-STY7866_RS13320;Name=STY7866_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13320
NZ_CAAR01000336.1	Protein Homology	CDS	4864	5073	.	+	0	ID=cds-WP_000504713.1;Parent=gene-STY7866_RS13320;Dbxref=Genbank:WP_000504713.1;Name=WP_000504713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458915.1;locus_tag=STY7866_RS13320;product=transcriptional regulator PefI;protein_id=WP_000504713.1;transl_table=11
NZ_CAAR01000336.1	RefSeq	gene	5058	5408	.	+	.	ID=gene-STY7866_RS13325;Name=STY7866_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13325
NZ_CAAR01000336.1	Protein Homology	CDS	5058	5408	.	+	0	ID=cds-WP_000135400.1;Parent=gene-STY7866_RS13325;Dbxref=Genbank:WP_000135400.1;Name=WP_000135400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458916.1;locus_tag=STY7866_RS13325;product=helix-turn-helix transcriptional regulator;protein_id=WP_000135400.1;transl_table=11
NZ_CAAR01000336.1	RefSeq	gene	5653	6306	.	+	.	ID=gene-STY7866_RS13330;Name=STY7866_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13330
NZ_CAAR01000336.1	Protein Homology	CDS	5653	6306	.	+	0	ID=cds-WP_000178596.1;Parent=gene-STY7866_RS13330;Dbxref=Genbank:WP_000178596.1;Name=WP_000178596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490503.1;locus_tag=STY7866_RS13330;product=thioredoxin domain-containing protein;protein_id=WP_000178596.1;transl_table=11
NZ_CAAR01000336.1	RefSeq	gene	6493	7338	.	+	.	ID=gene-STY7866_RS13340;Name=STY7866_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13340
NZ_CAAR01000336.1	Protein Homology	CDS	6493	7338	.	+	0	ID=cds-WP_000490324.1;Parent=gene-STY7866_RS13340;Dbxref=Genbank:WP_000490324.1;Name=WP_000490324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458917.1;locus_tag=STY7866_RS13340;product=YjiK family protein;protein_id=WP_000490324.1;transl_table=11
NZ_CAAR01000336.1	RefSeq	pseudogene	7601	8435	.	+	.	ID=gene-STY7866_RS27335;Name=STY7866_RS27335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27335;pseudo=true
NZ_CAAR01000336.1	Protein Homology	CDS	7601	8435	.	+	0	ID=cds-STY7866_RS27335;Parent=gene-STY7866_RS27335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=STY7866_RS27335;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_CAAR01000336.1	RefSeq	pseudogene	8546	14870	.	-	.	ID=gene-STY7866_RS27340;Name=STY7866_RS27340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27340;pseudo=true
NZ_CAAR01000336.1	Protein Homology	CDS	8546	14870	.	-	0	ID=cds-STY7866_RS27340;Parent=gene-STY7866_RS27340;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213429.1;locus_tag=STY7866_RS27340;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11
NZ_CAAR01000336.1	RefSeq	gene	14883	18182	.	-	.	ID=gene-STY7866_RS13365;Name=STY7866_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13365
NZ_CAAR01000336.1	Protein Homology	CDS	14883	18182	.	-	0	ID=cds-WP_000083327.1;Parent=gene-STY7866_RS13365;Dbxref=Genbank:WP_000083327.1;Name=WP_000083327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458920.1;locus_tag=STY7866_RS13365;product=hypothetical protein;protein_id=WP_000083327.1;transl_table=11
##sequence-region NZ_CAAR01000335.1 1 15216
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000335.1	RefSeq	region	1	15216	.	+	.	ID=NZ_CAAR01000335.1:1..15216;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000335.1	RefSeq	gene	1	1150	.	-	.	ID=gene-STY7866_RS13240;Name=STY7866_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13240;partial=true;start_range=.,1
NZ_CAAR01000335.1	Protein Homology	CDS	1	1150	.	-	0	ID=cds-WP_000437366.1;Parent=gene-STY7866_RS13240;Dbxref=Genbank:WP_000437366.1;Name=WP_000437366.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311977.1;locus_tag=STY7866_RS13240;partial=true;product=RNA polymerase sigma factor RpoD;protein_id=WP_000437366.1;start_range=.,1;transl_table=11
NZ_CAAR01000335.1	RefSeq	gene	1300	3045	.	-	.	ID=gene-STY7866_RS13245;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=STY7866_RS13245
NZ_CAAR01000335.1	Protein Homology	CDS	1300	3045	.	-	0	ID=cds-WP_000918867.1;Parent=gene-STY7866_RS13245;Dbxref=Genbank:WP_000918867.1;Name=WP_000918867.1;gbkey=CDS;gene=dnaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457601.1;locus_tag=STY7866_RS13245;product=DNA primase;protein_id=WP_000918867.1;transl_table=11
NZ_CAAR01000335.1	RefSeq	gene	3281	3496	.	-	.	ID=gene-STY7866_RS13250;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=STY7866_RS13250
NZ_CAAR01000335.1	Protein Homology	CDS	3281	3496	.	-	0	ID=cds-WP_001144069.1;Parent=gene-STY7866_RS13250;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;gbkey=CDS;gene=rpsU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=STY7866_RS13250;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11
NZ_CAAR01000335.1	RefSeq	gene	3724	4737	.	+	.	ID=gene-STY7866_RS13255;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=STY7866_RS13255
NZ_CAAR01000335.1	Protein Homology	CDS	3724	4737	.	+	0	ID=cds-WP_001264383.1;Parent=gene-STY7866_RS13255;Dbxref=Genbank:WP_001264383.1;Name=WP_001264383.1;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=STY7866_RS13255;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264383.1;transl_table=11
NZ_CAAR01000335.1	RefSeq	pseudogene	4778	4858	.	-	.	ID=gene-STY7866_RS27305;Name=STY7866_RS27305;end_range=4858,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27305;partial=true;pseudo=true
NZ_CAAR01000335.1	Protein Homology	CDS	4778	4858	.	-	0	ID=cds-STY7866_RS27305;Parent=gene-STY7866_RS27305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4858,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311973.1;locus_tag=STY7866_RS27305;partial=true;product=sodium:sulfate symporter;pseudo=true;transl_table=11
NZ_CAAR01000335.1	RefSeq	pseudogene	4860	4988	.	-	.	ID=gene-STY7866_RS27310;Name=STY7866_RS27310;end_range=4988,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27310;partial=true;pseudo=true;start_range=.,4860
NZ_CAAR01000335.1	Protein Homology	CDS	4860	4988	.	-	0	ID=cds-STY7866_RS27310;Parent=gene-STY7866_RS27310;Note=Involved in the tartrate degradation pathway%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4988,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=STY7866_RS27310;partial=true;product=L(+)-tartrate dehydratase subunit alpha;pseudo=true;start_range=.,4860;transl_table=11
NZ_CAAR01000335.1	RefSeq	gene	4987	5598	.	-	.	ID=gene-STY7866_RS13260;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=STY7866_RS13260
NZ_CAAR01000335.1	Protein Homology	CDS	4987	5598	.	-	0	ID=cds-WP_001272784.1;Parent=gene-STY7866_RS13260;Dbxref=Genbank:WP_001272784.1;Name=WP_001272784.1;gbkey=CDS;gene=plsY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457598.1;locus_tag=STY7866_RS13260;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272784.1;transl_table=11
NZ_CAAR01000335.1	RefSeq	gene	5705	6064	.	+	.	ID=gene-STY7866_RS13265;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=STY7866_RS13265
NZ_CAAR01000335.1	Protein Homology	CDS	5705	6064	.	+	0	ID=cds-WP_001681574.1;Parent=gene-STY7866_RS13265;Dbxref=Genbank:WP_001681574.1;Name=WP_001681574.1;gbkey=CDS;gene=folB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417530.2;locus_tag=STY7866_RS13265;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_001681574.1;transl_table=11
NZ_CAAR01000335.1	RefSeq	gene	6161	6982	.	+	.	ID=gene-STY7866_RS13270;Name=STY7866_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13270
NZ_CAAR01000335.1	Protein Homology	CDS	6161	6982	.	+	0	ID=cds-WP_001281933.1;Parent=gene-STY7866_RS13270;Dbxref=Genbank:WP_001281933.1;Name=WP_001281933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457596.1;locus_tag=STY7866_RS13270;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281933.1;transl_table=11
NZ_CAAR01000335.1	RefSeq	gene	7087	8328	.	-	.	ID=gene-STY7866_RS13275;Name=STY7866_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13275
NZ_CAAR01000335.1	Protein Homology	CDS	7087	8328	.	-	0	ID=cds-WP_000708457.1;Parent=gene-STY7866_RS13275;Dbxref=Genbank:WP_000708457.1;Name=WP_000708457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457595.1;locus_tag=STY7866_RS13275;product=multifunctional CCA addition/repair protein;protein_id=WP_000708457.1;transl_table=11
NZ_CAAR01000335.1	RefSeq	gene	8391	9005	.	-	.	ID=gene-STY7866_RS13280;Name=STY7866_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13280
NZ_CAAR01000335.1	Protein Homology	CDS	8391	9005	.	-	0	ID=cds-WP_001125344.1;Parent=gene-STY7866_RS13280;Dbxref=Genbank:WP_001125344.1;Name=WP_001125344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457594.1;locus_tag=STY7866_RS13280;product=SH3 domain-containing protein;protein_id=WP_001125344.1;transl_table=11
NZ_CAAR01000335.1	RefSeq	gene	9247	10548	.	+	.	ID=gene-STY7866_RS13285;Name=STY7866_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13285
NZ_CAAR01000335.1	Protein Homology	CDS	9247	10548	.	+	0	ID=cds-WP_000046233.1;Parent=gene-STY7866_RS13285;Dbxref=Genbank:WP_000046233.1;Name=WP_000046233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457593.1;locus_tag=STY7866_RS13285;product=inorganic triphosphatase;protein_id=WP_000046233.1;transl_table=11
NZ_CAAR01000335.1	RefSeq	gene	10666	13509	.	+	.	ID=gene-STY7866_RS13290;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=STY7866_RS13290
NZ_CAAR01000335.1	Protein Homology	CDS	10666	13509	.	+	0	ID=cds-WP_000188297.1;Parent=gene-STY7866_RS13290;Dbxref=Genbank:WP_000188297.1;Name=WP_000188297.1;gbkey=CDS;gene=glnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457592.1;locus_tag=STY7866_RS13290;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_000188297.1;transl_table=11
NZ_CAAR01000335.1	RefSeq	gene	13557	14990	.	+	.	ID=gene-STY7866_RS13295;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=STY7866_RS13295
NZ_CAAR01000335.1	Protein Homology	CDS	13557	14990	.	+	0	ID=cds-WP_000867682.1;Parent=gene-STY7866_RS13295;Dbxref=Genbank:WP_000867682.1;Name=WP_000867682.1;gbkey=CDS;gene=hldE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457591.1;locus_tag=STY7866_RS13295;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000867682.1;transl_table=11
NZ_CAAR01000335.1	RefSeq	gene	15150	15216	.	-	.	ID=gene-STY7866_RS27315;Name=STY7866_RS27315;end_range=15216,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27315;partial=true
NZ_CAAR01000335.1	Protein Homology	CDS	15150	15216	.	-	1	ID=cds-WP_151260003.1;Parent=gene-STY7866_RS27315;Dbxref=Genbank:WP_151260003.1;Name=WP_151260003.1;end_range=15216,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13956.4;locus_tag=STY7866_RS27315;partial=true;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_151260003.1;transl_table=11
##sequence-region NZ_CAAR01000334.1 1 7822
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000334.1	RefSeq	region	1	7822	.	+	.	ID=NZ_CAAR01000334.1:1..7822;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000334.1	RefSeq	pseudogene	1	225	.	-	.	ID=gene-STY7866_RS13190;Name=STY7866_RS13190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS13190;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000334.1	Protein Homology	CDS	1	225	.	-	0	ID=cds-STY7866_RS13190;Parent=gene-STY7866_RS13190;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456394.1;locus_tag=STY7866_RS13190;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000334.1	RefSeq	gene	267	1208	.	-	.	ID=gene-STY7866_RS13195;Name=STY7866_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13195
NZ_CAAR01000334.1	Protein Homology	CDS	267	1208	.	-	0	ID=cds-WP_000627464.1;Parent=gene-STY7866_RS13195;Dbxref=Genbank:WP_000627464.1;Name=WP_000627464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456395.1;locus_tag=STY7866_RS13195;product=DUF2184 domain-containing protein;protein_id=WP_000627464.1;transl_table=11
NZ_CAAR01000334.1	RefSeq	gene	1220	1717	.	-	.	ID=gene-STY7866_RS13200;Name=STY7866_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13200
NZ_CAAR01000334.1	Protein Homology	CDS	1220	1717	.	-	0	ID=cds-WP_000128060.1;Parent=gene-STY7866_RS13200;Dbxref=Genbank:WP_000128060.1;Name=WP_000128060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456396.1;locus_tag=STY7866_RS13200;product=hypothetical protein;protein_id=WP_000128060.1;transl_table=11
NZ_CAAR01000334.1	RefSeq	pseudogene	1722	2953	.	-	.	ID=gene-STY7866_RS13205;Name=STY7866_RS13205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS13205;pseudo=true
NZ_CAAR01000334.1	Protein Homology	CDS	1722	2953	.	-	0	ID=cds-STY7866_RS13205;Parent=gene-STY7866_RS13205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456397.1;locus_tag=STY7866_RS13205;product=DUF2213 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000334.1	RefSeq	gene	2968	3705	.	-	.	ID=gene-STY7866_RS13210;Name=STY7866_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13210
NZ_CAAR01000334.1	Protein Homology	CDS	2968	3705	.	-	0	ID=cds-WP_138010671.1;Parent=gene-STY7866_RS13210;Dbxref=Genbank:WP_138010671.1;Name=WP_138010671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455527.1;locus_tag=STY7866_RS13210;product=phage head morphogenesis protein;protein_id=WP_138010671.1;transl_table=11
NZ_CAAR01000334.1	RefSeq	gene	3590	5059	.	-	.	ID=gene-STY7866_RS13215;Name=STY7866_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13215
NZ_CAAR01000334.1	Protein Homology	CDS	3590	5059	.	-	0	ID=cds-WP_000113509.1;Parent=gene-STY7866_RS13215;Dbxref=Genbank:WP_000113509.1;Name=WP_000113509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113511.1;locus_tag=STY7866_RS13215;product=DUF1073 domain-containing protein;protein_id=WP_000113509.1;transl_table=11
NZ_CAAR01000334.1	RefSeq	gene	5059	6462	.	-	.	ID=gene-STY7866_RS13220;Name=STY7866_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13220
NZ_CAAR01000334.1	Protein Homology	CDS	5059	6462	.	-	0	ID=cds-WP_000204794.1;Parent=gene-STY7866_RS13220;Dbxref=Genbank:WP_000204794.1;Name=WP_000204794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455525.1;locus_tag=STY7866_RS13220;product=PBSX family phage terminase large subunit;protein_id=WP_000204794.1;transl_table=11
NZ_CAAR01000334.1	RefSeq	gene	6428	7180	.	-	.	ID=gene-STY7866_RS13225;Name=STY7866_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13225
NZ_CAAR01000334.1	Protein Homology	CDS	6428	7180	.	-	0	ID=cds-WP_001118119.1;Parent=gene-STY7866_RS13225;Dbxref=Genbank:WP_001118119.1;Name=WP_001118119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455524.1;locus_tag=STY7866_RS13225;product=hypothetical protein;protein_id=WP_001118119.1;transl_table=11
NZ_CAAR01000334.1	RefSeq	gene	7271	7498	.	-	.	ID=gene-STY7866_RS13230;Name=STY7866_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13230
NZ_CAAR01000334.1	Protein Homology	CDS	7271	7498	.	-	0	ID=cds-WP_001070544.1;Parent=gene-STY7866_RS13230;Dbxref=Genbank:WP_001070544.1;Name=WP_001070544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001070544.1;locus_tag=STY7866_RS13230;product=hypothetical protein;protein_id=WP_001070544.1;transl_table=11
NZ_CAAR01000334.1	RefSeq	pseudogene	7595	7822	.	-	.	ID=gene-STY7866_RS13235;Name=STY7866_RS13235;end_range=7822,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS13235;partial=true;pseudo=true
NZ_CAAR01000334.1	Protein Homology	CDS	7595	7822	.	-	0	ID=cds-STY7866_RS13235;Parent=gene-STY7866_RS13235;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7822,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455522.1;locus_tag=STY7866_RS13235;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000333.1 1 5930
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000333.1	RefSeq	region	1	5930	.	+	.	ID=NZ_CAAR01000333.1:1..5930;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000333.1	RefSeq	gene	113	1102	.	+	.	ID=gene-STY7866_RS13155;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=STY7866_RS13155
NZ_CAAR01000333.1	Protein Homology	CDS	113	1102	.	+	0	ID=cds-WP_000093001.1;Parent=gene-STY7866_RS13155;Dbxref=Genbank:WP_000093001.1;Name=WP_000093001.1;gbkey=CDS;gene=pdxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454703.1;locus_tag=STY7866_RS13155;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000093001.1;transl_table=11
NZ_CAAR01000333.1	RefSeq	gene	1099	1920	.	+	.	ID=gene-STY7866_RS13160;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=STY7866_RS13160
NZ_CAAR01000333.1	Protein Homology	CDS	1099	1920	.	+	0	ID=cds-WP_001065397.1;Parent=gene-STY7866_RS13160;Dbxref=Genbank:WP_001065397.1;Name=WP_001065397.1;gbkey=CDS;gene=rsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454702.1;locus_tag=STY7866_RS13160;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065397.1;transl_table=11
NZ_CAAR01000333.1	RefSeq	gene	1923	2300	.	+	.	ID=gene-STY7866_RS13165;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=STY7866_RS13165
NZ_CAAR01000333.1	Protein Homology	CDS	1923	2300	.	+	0	ID=cds-WP_000610896.1;Parent=gene-STY7866_RS13165;Dbxref=Genbank:WP_000610896.1;Name=WP_000610896.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454701.1;locus_tag=STY7866_RS13165;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610896.1;transl_table=11
NZ_CAAR01000333.1	RefSeq	pseudogene	2311	3158	.	+	.	ID=gene-STY7866_RS13170;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=pseudogene;locus_tag=STY7866_RS13170;pseudo=true
NZ_CAAR01000333.1	Protein Homology	CDS	2311	3158	.	+	0	ID=cds-STY7866_RS13170;Parent=gene-STY7866_RS13170;Note=frameshifted;gbkey=CDS;gene=apaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454700.1;locus_tag=STY7866_RS13170;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical);pseudo=true;transl_table=11
NZ_CAAR01000333.1	RefSeq	gene	3254	3733	.	-	.	ID=gene-STY7866_RS13175;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=STY7866_RS13175
NZ_CAAR01000333.1	Protein Homology	CDS	3254	3733	.	-	0	ID=cds-WP_000624378.1;Parent=gene-STY7866_RS13175;Dbxref=Genbank:WP_000624378.1;Name=WP_000624378.1;gbkey=CDS;gene=folA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=STY7866_RS13175;product=type 3 dihydrofolate reductase;protein_id=WP_000624378.1;transl_table=11
NZ_CAAR01000333.1	RefSeq	gene	3933	5795	.	-	.	ID=gene-STY7866_RS13180;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=STY7866_RS13180
NZ_CAAR01000333.1	Protein Homology	CDS	3933	5795	.	-	0	ID=cds-WP_000377172.1;Parent=gene-STY7866_RS13180;Dbxref=Genbank:WP_000377172.1;Name=WP_000377172.1;gbkey=CDS;gene=kefC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454698.1;locus_tag=STY7866_RS13180;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377172.1;transl_table=11
NZ_CAAR01000333.1	RefSeq	pseudogene	5788	5930	.	-	.	ID=gene-STY7866_RS13185;Name=STY7866_RS13185;end_range=5930,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS13185;partial=true;pseudo=true
NZ_CAAR01000333.1	Protein Homology	CDS	5788	5930	.	-	2	ID=cds-STY7866_RS13185;Parent=gene-STY7866_RS13185;Note=Required for full activity of KefC%2C a potassium-proton antiporter%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5930,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454697.1;locus_tag=STY7866_RS13185;partial=true;product=glutathione-regulated potassium-efflux system ancillary protein KefF;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000332.1 1 14525
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000332.1	RefSeq	region	1	14525	.	+	.	ID=NZ_CAAR01000332.1:1..14525;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000332.1	RefSeq	gene	115	1029	.	-	.	ID=gene-STY7866_RS13080;Name=STY7866_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13080
NZ_CAAR01000332.1	Protein Homology	CDS	115	1029	.	-	0	ID=cds-WP_000803316.1;Parent=gene-STY7866_RS13080;Dbxref=Genbank:WP_000803316.1;Name=WP_000803316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456616.1;locus_tag=STY7866_RS13080;product=LysR family transcriptional regulator;protein_id=WP_000803316.1;transl_table=11
NZ_CAAR01000332.1	RefSeq	gene	1075	1899	.	-	.	ID=gene-STY7866_RS13085;Name=STY7866_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13085
NZ_CAAR01000332.1	Protein Homology	CDS	1075	1899	.	-	0	ID=cds-WP_000754712.1;Parent=gene-STY7866_RS13085;Dbxref=Genbank:WP_000754712.1;Name=WP_000754712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456617.1;locus_tag=STY7866_RS13085;product=SDR family oxidoreductase;protein_id=WP_000754712.1;transl_table=11
NZ_CAAR01000332.1	RefSeq	gene	2062	2103	.	+	.	ID=gene-STY7866_RS27300;Name=STY7866_RS27300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27300
NZ_CAAR01000332.1	Protein Homology	CDS	2062	2103	.	+	0	ID=cds-WP_010989201.1;Parent=gene-STY7866_RS27300;Dbxref=Genbank:WP_010989201.1;Name=WP_010989201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456618.1;locus_tag=STY7866_RS27300;product=his operon leader peptide;protein_id=WP_010989201.1;transl_table=11
NZ_CAAR01000332.1	RefSeq	gene	2247	3146	.	+	.	ID=gene-STY7866_RS13090;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=STY7866_RS13090
NZ_CAAR01000332.1	Protein Homology	CDS	2247	3146	.	+	0	ID=cds-WP_000886604.1;Parent=gene-STY7866_RS13090;Dbxref=Genbank:WP_000886604.1;Name=WP_000886604.1;gbkey=CDS;gene=hisG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=STY7866_RS13090;product=ATP phosphoribosyltransferase;protein_id=WP_000886604.1;transl_table=11
NZ_CAAR01000332.1	RefSeq	gene	3249	4553	.	+	.	ID=gene-STY7866_RS13095;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=STY7866_RS13095
NZ_CAAR01000332.1	Protein Homology	CDS	3249	4553	.	+	0	ID=cds-WP_000009629.1;Parent=gene-STY7866_RS13095;Dbxref=Genbank:WP_000009629.1;Name=WP_000009629.1;gbkey=CDS;gene=hisD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128080.1;locus_tag=STY7866_RS13095;product=histidinol dehydrogenase;protein_id=WP_000009629.1;transl_table=11
NZ_CAAR01000332.1	RefSeq	gene	4550	5629	.	+	.	ID=gene-STY7866_RS13100;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=STY7866_RS13100
NZ_CAAR01000332.1	Protein Homology	CDS	4550	5629	.	+	0	ID=cds-WP_000102709.1;Parent=gene-STY7866_RS13100;Dbxref=Genbank:WP_000102709.1;Name=WP_000102709.1;gbkey=CDS;gene=hisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456621.1;locus_tag=STY7866_RS13100;product=histidinol-phosphate transaminase;protein_id=WP_000102709.1;transl_table=11
NZ_CAAR01000332.1	RefSeq	gene	5626	6693	.	+	.	ID=gene-STY7866_RS13105;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=STY7866_RS13105
NZ_CAAR01000332.1	Protein Homology	CDS	5626	6693	.	+	0	ID=cds-WP_000080040.1;Parent=gene-STY7866_RS13105;Dbxref=Genbank:WP_000080040.1;Name=WP_000080040.1;gbkey=CDS;gene=hisB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128082.1;locus_tag=STY7866_RS13105;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_000080040.1;transl_table=11
NZ_CAAR01000332.1	RefSeq	gene	6693	7283	.	+	.	ID=gene-STY7866_RS13110;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=STY7866_RS13110
NZ_CAAR01000332.1	Protein Homology	CDS	6693	7283	.	+	0	ID=cds-WP_001103591.1;Parent=gene-STY7866_RS13110;Dbxref=Genbank:WP_001103591.1;Name=WP_001103591.1;gbkey=CDS;gene=hisH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=STY7866_RS13110;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001103591.1;transl_table=11
NZ_CAAR01000332.1	RefSeq	gene	7283	8020	.	+	.	ID=gene-STY7866_RS13115;Name=STY7866_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13115
NZ_CAAR01000332.1	Protein Homology	CDS	7283	8020	.	+	0	ID=cds-WP_000586403.1;Parent=gene-STY7866_RS13115;Dbxref=Genbank:WP_000586403.1;Name=WP_000586403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456624.1;locus_tag=STY7866_RS13115;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586403.1;transl_table=11
NZ_CAAR01000332.1	RefSeq	gene	8002	8778	.	+	.	ID=gene-STY7866_RS13120;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=STY7866_RS13120
NZ_CAAR01000332.1	Protein Homology	CDS	8002	8778	.	+	0	ID=cds-WP_000880125.1;Parent=gene-STY7866_RS13120;Dbxref=Genbank:WP_000880125.1;Name=WP_000880125.1;gbkey=CDS;gene=hisF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456625.1;locus_tag=STY7866_RS13120;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880125.1;transl_table=11
NZ_CAAR01000332.1	RefSeq	gene	8772	9383	.	+	.	ID=gene-STY7866_RS13125;Name=STY7866_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13125
NZ_CAAR01000332.1	Protein Homology	CDS	8772	9383	.	+	0	ID=cds-WP_000954855.1;Parent=gene-STY7866_RS13125;Dbxref=Genbank:WP_000954855.1;Name=WP_000954855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456626.1;locus_tag=STY7866_RS13125;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954855.1;transl_table=11
NZ_CAAR01000332.1	RefSeq	gene	9464	10447	.	-	.	ID=gene-STY7866_RS13130;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=STY7866_RS13130
NZ_CAAR01000332.1	Protein Homology	CDS	9464	10447	.	-	0	ID=cds-WP_000215243.1;Parent=gene-STY7866_RS13130;Dbxref=Genbank:WP_000215243.1;Name=WP_000215243.1;gbkey=CDS;gene=wzzB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456627.1;locus_tag=STY7866_RS13130;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_000215243.1;transl_table=11
NZ_CAAR01000332.1	RefSeq	gene	10590	11756	.	-	.	ID=gene-STY7866_RS13135;Name=STY7866_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13135
NZ_CAAR01000332.1	Protein Homology	CDS	10590	11756	.	-	0	ID=cds-WP_000704814.1;Parent=gene-STY7866_RS13135;Dbxref=Genbank:WP_000704814.1;Name=WP_000704814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456628.1;locus_tag=STY7866_RS13135;product=UDP-glucose 6-dehydrogenase;protein_id=WP_000704814.1;transl_table=11
NZ_CAAR01000332.1	RefSeq	gene	11993	13399	.	-	.	ID=gene-STY7866_RS13140;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=STY7866_RS13140
NZ_CAAR01000332.1	Protein Homology	CDS	11993	13399	.	-	0	ID=cds-WP_000043528.1;Parent=gene-STY7866_RS13140;Dbxref=Genbank:WP_000043528.1;Name=WP_000043528.1;gbkey=CDS;gene=gndA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043504.1;locus_tag=STY7866_RS13140;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_000043528.1;transl_table=11
NZ_CAAR01000332.1	RefSeq	gene	13563	14525	.	-	.	ID=gene-STY7866_RS13145;Name=wbaP;end_range=14525,.;gbkey=Gene;gene=wbaP;gene_biotype=protein_coding;locus_tag=STY7866_RS13145;partial=true
NZ_CAAR01000332.1	Protein Homology	CDS	13563	14525	.	-	0	ID=cds-WP_000292146.1;Parent=gene-STY7866_RS13145;Dbxref=Genbank:WP_000292146.1;Name=WP_000292146.1;end_range=14525,.;gbkey=CDS;gene=wbaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456630.1;locus_tag=STY7866_RS13145;partial=true;product=undecaprenyl-phosphate galactose phosphotransferase WbaP;protein_id=WP_000292146.1;transl_table=11
##sequence-region NZ_CAAR01000331.1 1 6576
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000331.1	RefSeq	region	1	6576	.	+	.	ID=NZ_CAAR01000331.1:1..6576;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000331.1	RefSeq	pseudogene	1	616	.	-	.	ID=gene-STY7866_RS13045;Name=STY7866_RS13045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS13045;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000331.1	Protein Homology	CDS	1	616	.	-	0	ID=cds-STY7866_RS13045;Parent=gene-STY7866_RS13045;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000925246.1;locus_tag=STY7866_RS13045;partial=true;product=fimbrial protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000331.1	RefSeq	gene	653	1249	.	-	.	ID=gene-STY7866_RS13050;Name=STY7866_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13050
NZ_CAAR01000331.1	Protein Homology	CDS	653	1249	.	-	0	ID=cds-WP_010989108.1;Parent=gene-STY7866_RS13050;Dbxref=Genbank:WP_010989108.1;Name=WP_010989108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454793.1;locus_tag=STY7866_RS13050;product=fimbrial protein;protein_id=WP_010989108.1;transl_table=11
NZ_CAAR01000331.1	RefSeq	gene	1249	1863	.	-	.	ID=gene-STY7866_RS13055;Name=staE;gbkey=Gene;gene=staE;gene_biotype=protein_coding;locus_tag=STY7866_RS13055
NZ_CAAR01000331.1	Protein Homology	CDS	1249	1863	.	-	0	ID=cds-WP_010989109.1;Parent=gene-STY7866_RS13055;Dbxref=Genbank:WP_010989109.1;Name=WP_010989109.1;gbkey=CDS;gene=staE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454794.1;locus_tag=STY7866_RS13055;product=fimbrial protein StaE;protein_id=WP_010989109.1;transl_table=11
NZ_CAAR01000331.1	RefSeq	gene	1872	2438	.	-	.	ID=gene-STY7866_RS13060;Name=STY7866_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13060
NZ_CAAR01000331.1	Protein Homology	CDS	1872	2438	.	-	0	ID=cds-WP_000827925.1;Parent=gene-STY7866_RS13060;Dbxref=Genbank:WP_000827925.1;Name=WP_000827925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454795.1;locus_tag=STY7866_RS13060;product=fimbrial protein;protein_id=WP_000827925.1;transl_table=11
NZ_CAAR01000331.1	RefSeq	gene	2425	5031	.	-	.	ID=gene-STY7866_RS13065;Name=STY7866_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13065
NZ_CAAR01000331.1	Protein Homology	CDS	2425	5031	.	-	0	ID=cds-WP_001125011.1;Parent=gene-STY7866_RS13065;Dbxref=Genbank:WP_001125011.1;Name=WP_001125011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001125008.1;locus_tag=STY7866_RS13065;product=outer membrane usher protein;protein_id=WP_001125011.1;transl_table=11
NZ_CAAR01000331.1	RefSeq	gene	5091	5825	.	-	.	ID=gene-STY7866_RS13070;Name=STY7866_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13070
NZ_CAAR01000331.1	Protein Homology	CDS	5091	5825	.	-	0	ID=cds-WP_000967611.1;Parent=gene-STY7866_RS13070;Dbxref=Genbank:WP_000967611.1;Name=WP_000967611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454797.1;locus_tag=STY7866_RS13070;product=fimbrial chaperone;protein_id=WP_000967611.1;transl_table=11
NZ_CAAR01000331.1	RefSeq	gene	6004	6576	.	-	.	ID=gene-STY7866_RS13075;Name=STY7866_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13075
NZ_CAAR01000331.1	Protein Homology	CDS	6004	6576	.	-	0	ID=cds-WP_001764203.1;Parent=gene-STY7866_RS13075;Dbxref=Genbank:WP_001764203.1;Name=WP_001764203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454798.1;locus_tag=STY7866_RS13075;product=fimbrial protein;protein_id=WP_001764203.1;transl_table=11
##sequence-region NZ_CAAR01000330.1 1 5054
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000330.1	RefSeq	region	1	5054	.	+	.	ID=NZ_CAAR01000330.1:1..5054;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000330.1	RefSeq	gene	396	1466	.	+	.	ID=gene-STY7866_RS13020;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=STY7866_RS13020
NZ_CAAR01000330.1	Protein Homology	CDS	396	1466	.	+	0	ID=cds-WP_001168062.1;Parent=gene-STY7866_RS13020;Dbxref=Genbank:WP_001168062.1;Name=WP_001168062.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457140.1;locus_tag=STY7866_RS13020;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168062.1;transl_table=11
NZ_CAAR01000330.1	RefSeq	gene	1476	2597	.	+	.	ID=gene-STY7866_RS13025;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=STY7866_RS13025
NZ_CAAR01000330.1	Protein Homology	CDS	1476	2597	.	+	0	ID=cds-WP_000225191.1;Parent=gene-STY7866_RS13025;Dbxref=Genbank:WP_000225191.1;Name=WP_000225191.1;gbkey=CDS;gene=tyrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457139.1;locus_tag=STY7866_RS13025;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225191.1;transl_table=11
NZ_CAAR01000330.1	RefSeq	gene	2655	3563	.	+	.	ID=gene-STY7866_RS13030;Name=STY7866_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13030
NZ_CAAR01000330.1	Protein Homology	CDS	2655	3563	.	+	0	ID=cds-WP_000210976.1;Parent=gene-STY7866_RS13030;Dbxref=Genbank:WP_000210976.1;Name=WP_000210976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457138.1;locus_tag=STY7866_RS13030;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_000210976.1;transl_table=11
NZ_CAAR01000330.1	RefSeq	gene	3524	4684	.	-	.	ID=gene-STY7866_RS13035;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=STY7866_RS13035
NZ_CAAR01000330.1	Protein Homology	CDS	3524	4684	.	-	0	ID=cds-WP_000200079.1;Parent=gene-STY7866_RS13035;Dbxref=Genbank:WP_000200079.1;Name=WP_000200079.1;gbkey=CDS;gene=pheA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457137.1;locus_tag=STY7866_RS13035;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200079.1;transl_table=11
NZ_CAAR01000330.1	RefSeq	gene	4784	4831	.	-	.	ID=gene-STY7866_RS27295;Name=STY7866_RS27295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27295
NZ_CAAR01000330.1	Protein Homology	CDS	4784	4831	.	-	0	ID=cds-WP_010989056.1;Parent=gene-STY7866_RS27295;Dbxref=Genbank:WP_010989056.1;Name=WP_010989056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457136.1;locus_tag=STY7866_RS27295;product=hypothetical protein;protein_id=WP_010989056.1;transl_table=11
NZ_CAAR01000330.1	RefSeq	pseudogene	4935	5054	.	-	.	ID=gene-STY7866_RS13040;Name=STY7866_RS13040;end_range=5054,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS13040;partial=true;pseudo=true
NZ_CAAR01000330.1	Protein Homology	CDS	4935	5054	.	-	0	ID=cds-STY7866_RS13040;Parent=gene-STY7866_RS13040;Note=associated with 30S ribosomal subunit%3B interferes with translation elongation%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5054,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311487.1;locus_tag=STY7866_RS13040;partial=true;product=translation inhibitor protein RaiA;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000329.1 1 1147
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000329.1	RefSeq	region	1	1147	.	+	.	ID=NZ_CAAR01000329.1:1..1147;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000329.1	RefSeq	gene	1	921	.	+	.	ID=gene-STY7866_RS13015;Name=STY7866_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13015;partial=true;start_range=.,1
NZ_CAAR01000329.1	Protein Homology	CDS	1	921	.	+	0	ID=cds-WP_000296572.1;Parent=gene-STY7866_RS13015;Dbxref=Genbank:WP_000296572.1;Name=WP_000296572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000003711.1;locus_tag=STY7866_RS13015;partial=true;product=nucleoid-associated protein;protein_id=WP_000296572.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000328.1 1 15602
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000328.1	RefSeq	region	1	15602	.	+	.	ID=NZ_CAAR01000328.1:1..15602;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000328.1	RefSeq	gene	1	585	.	+	.	ID=gene-STY7866_RS12950;Name=STY7866_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12950;partial=true;start_range=.,1
NZ_CAAR01000328.1	Protein Homology	CDS	1	585	.	+	0	ID=cds-WP_000851216.1;Parent=gene-STY7866_RS12950;Dbxref=Genbank:WP_000851216.1;Name=WP_000851216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458729.1;locus_tag=STY7866_RS12950;partial=true;product=class I SAM-dependent methyltransferase;protein_id=WP_000851216.1;start_range=.,1;transl_table=11
NZ_CAAR01000328.1	RefSeq	pseudogene	887	2856	.	-	.	ID=gene-STY7866_RS12955;Name=vexE;gbkey=Gene;gene=vexE;gene_biotype=pseudogene;locus_tag=STY7866_RS12955;pseudo=true
NZ_CAAR01000328.1	Protein Homology	CDS	887	2856	.	-	0	ID=cds-STY7866_RS12955;Parent=gene-STY7866_RS12955;Note=frameshifted;gbkey=CDS;gene=vexE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458730.1;locus_tag=STY7866_RS12955;product=Vi polysaccharide transport protein VexE;pseudo=true;transl_table=11
NZ_CAAR01000328.1	RefSeq	pseudogene	2876	4181	.	-	.	ID=gene-STY7866_RS12960;Name=vexD;gbkey=Gene;gene=vexD;gene_biotype=pseudogene;locus_tag=STY7866_RS12960;pseudo=true
NZ_CAAR01000328.1	Protein Homology	CDS	2876	4181	.	-	0	ID=cds-STY7866_RS12960;Parent=gene-STY7866_RS12960;Note=frameshifted;gbkey=CDS;gene=vexD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458731.1;locus_tag=STY7866_RS12960;product=Vi polysaccharide ABC transporter inner membrane protein VexD;pseudo=true;transl_table=11
NZ_CAAR01000328.1	RefSeq	gene	4204	4899	.	-	.	ID=gene-STY7866_RS12965;Name=vexC;gbkey=Gene;gene=vexC;gene_biotype=protein_coding;locus_tag=STY7866_RS12965
NZ_CAAR01000328.1	Protein Homology	CDS	4204	4899	.	-	0	ID=cds-WP_000467404.1;Parent=gene-STY7866_RS12965;Dbxref=Genbank:WP_000467404.1;Name=WP_000467404.1;gbkey=CDS;gene=vexC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458732.1;locus_tag=STY7866_RS12965;product=Vi polysaccharide ABC transporter ATP-binding protein VexC;protein_id=WP_000467404.1;transl_table=11
NZ_CAAR01000328.1	RefSeq	gene	4925	5719	.	-	.	ID=gene-STY7866_RS12970;Name=vexB;gbkey=Gene;gene=vexB;gene_biotype=protein_coding;locus_tag=STY7866_RS12970
NZ_CAAR01000328.1	Protein Homology	CDS	4925	5719	.	-	0	ID=cds-WP_001023498.1;Parent=gene-STY7866_RS12970;Dbxref=Genbank:WP_001023498.1;Name=WP_001023498.1;gbkey=CDS;gene=vexB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458733.1;locus_tag=STY7866_RS12970;product=Vi polysaccharide ABC transporter inner membrane protein VexB;protein_id=WP_001023498.1;transl_table=11
NZ_CAAR01000328.1	RefSeq	gene	5729	6796	.	-	.	ID=gene-STY7866_RS12975;Name=vexA;gbkey=Gene;gene=vexA;gene_biotype=protein_coding;locus_tag=STY7866_RS12975
NZ_CAAR01000328.1	Protein Homology	CDS	5729	6796	.	-	0	ID=cds-WP_000720235.1;Parent=gene-STY7866_RS12975;Dbxref=Genbank:WP_000720235.1;Name=WP_000720235.1;gbkey=CDS;gene=vexA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458734.1;locus_tag=STY7866_RS12975;product=Vi polysaccharide ABC transporter protein VexA;protein_id=WP_000720235.1;transl_table=11
NZ_CAAR01000328.1	RefSeq	gene	6841	8577	.	-	.	ID=gene-STY7866_RS12980;Name=tviE;gbkey=Gene;gene=tviE;gene_biotype=protein_coding;locus_tag=STY7866_RS12980
NZ_CAAR01000328.1	Protein Homology	CDS	6841	8577	.	-	0	ID=cds-WP_000632617.1;Parent=gene-STY7866_RS12980;Dbxref=Genbank:WP_000632617.1;Name=WP_000632617.1;gbkey=CDS;gene=tviE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458735.1;locus_tag=STY7866_RS12980;product=Vi polysaccharide biosynthesis glycosyltransferase TviE;protein_id=WP_000632617.1;transl_table=11
NZ_CAAR01000328.1	RefSeq	gene	8577	11072	.	-	.	ID=gene-STY7866_RS12985;Name=tviD;gbkey=Gene;gene=tviD;gene_biotype=protein_coding;locus_tag=STY7866_RS12985
NZ_CAAR01000328.1	Protein Homology	CDS	8577	11072	.	-	0	ID=cds-WP_010989299.1;Parent=gene-STY7866_RS12985;Dbxref=Genbank:WP_010989299.1;Name=WP_010989299.1;gbkey=CDS;gene=tviD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458738.1;locus_tag=STY7866_RS12985;product=Vi polysaccharide biosynthesis protein TviD;protein_id=WP_010989299.1;transl_table=11
NZ_CAAR01000328.1	RefSeq	gene	11096	12142	.	-	.	ID=gene-STY7866_RS12990;Name=tviC;gbkey=Gene;gene=tviC;gene_biotype=protein_coding;locus_tag=STY7866_RS12990
NZ_CAAR01000328.1	Protein Homology	CDS	11096	12142	.	-	0	ID=cds-WP_000127915.1;Parent=gene-STY7866_RS12990;Dbxref=Genbank:WP_000127915.1;Name=WP_000127915.1;gbkey=CDS;gene=tviC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458739.1;locus_tag=STY7866_RS12990;product=Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC;protein_id=WP_000127915.1;transl_table=11
NZ_CAAR01000328.1	RefSeq	gene	12145	13422	.	-	.	ID=gene-STY7866_RS12995;Name=tviB;gbkey=Gene;gene=tviB;gene_biotype=protein_coding;locus_tag=STY7866_RS12995
NZ_CAAR01000328.1	Protein Homology	CDS	12145	13422	.	-	0	ID=cds-WP_000466893.1;Parent=gene-STY7866_RS12995;Dbxref=Genbank:WP_000466893.1;Name=WP_000466893.1;gbkey=CDS;gene=tviB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458740.1;locus_tag=STY7866_RS12995;product=Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB;protein_id=WP_000466893.1;transl_table=11
NZ_CAAR01000328.1	RefSeq	gene	13667	14206	.	-	.	ID=gene-STY7866_RS13000;Name=tviA;gbkey=Gene;gene=tviA;gene_biotype=protein_coding;locus_tag=STY7866_RS13000
NZ_CAAR01000328.1	Protein Homology	CDS	13667	14206	.	-	0	ID=cds-WP_001210944.1;Parent=gene-STY7866_RS13000;Dbxref=Genbank:WP_001210944.1;Name=WP_001210944.1;gbkey=CDS;gene=tviA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458741.1;locus_tag=STY7866_RS13000;product=Vi polysaccharide biosynthesis regulator TviA;protein_id=WP_001210944.1;transl_table=11
NZ_CAAR01000328.1	RefSeq	gene	14747	14935	.	+	.	ID=gene-STY7866_RS13005;Name=STY7866_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS13005
NZ_CAAR01000328.1	Protein Homology	CDS	14747	14935	.	+	0	ID=cds-WP_001764200.1;Parent=gene-STY7866_RS13005;Dbxref=Genbank:WP_001764200.1;Name=WP_001764200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764200.1;locus_tag=STY7866_RS13005;product=hypothetical protein;protein_id=WP_001764200.1;transl_table=11
NZ_CAAR01000328.1	RefSeq	pseudogene	15060	15602	.	+	.	ID=gene-STY7866_RS13010;Name=STY7866_RS13010;end_range=15602,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS13010;partial=true;pseudo=true
NZ_CAAR01000328.1	Protein Homology	CDS	15060	15602	.	+	0	ID=cds-STY7866_RS13010;Parent=gene-STY7866_RS13010;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=15602,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458743.1;locus_tag=STY7866_RS13010;partial=true;product=DNA helicase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000327.1 1 1359
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000327.1	RefSeq	region	1	1359	.	+	.	ID=NZ_CAAR01000327.1:1..1359;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000327.1	RefSeq	pseudogene	1	498	.	+	.	ID=gene-STY7866_RS12940;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=pseudogene;locus_tag=STY7866_RS12940;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000327.1	Protein Homology	CDS	1	498	.	+	0	ID=cds-STY7866_RS12940;Parent=gene-STY7866_RS12940;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=pntB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456000.1;locus_tag=STY7866_RS12940;partial=true;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000327.1	RefSeq	pseudogene	673	1359	.	-	.	ID=gene-STY7866_RS12945;Name=STY7866_RS12945;end_range=1359,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12945;partial=true;pseudo=true
NZ_CAAR01000327.1	Protein Homology	CDS	673	1359	.	-	1	ID=cds-STY7866_RS12945;Parent=gene-STY7866_RS12945;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=1359,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455999.1;locus_tag=STY7866_RS12945;partial=true;product=AI-2E family transporter;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000326.1 1 4638
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000326.1	RefSeq	region	1	4638	.	+	.	ID=NZ_CAAR01000326.1:1..4638;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000326.1	RefSeq	gene	302	1579	.	-	.	ID=gene-STY7866_RS12910;Name=STY7866_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12910
NZ_CAAR01000326.1	Protein Homology	CDS	302	1579	.	-	0	ID=cds-WP_000344436.1;Parent=gene-STY7866_RS12910;Dbxref=Genbank:WP_000344436.1;Name=WP_000344436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456988.1;locus_tag=STY7866_RS12910;product=DUF1963 domain-containing protein;protein_id=WP_000344436.1;transl_table=11
NZ_CAAR01000326.1	RefSeq	gene	1708	2037	.	-	.	ID=gene-STY7866_RS12915;Name=STY7866_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12915
NZ_CAAR01000326.1	Protein Homology	CDS	1708	2037	.	-	0	ID=cds-WP_001194343.1;Parent=gene-STY7866_RS12915;Dbxref=Genbank:WP_001194343.1;Name=WP_001194343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=STY7866_RS12915;product=hypothetical protein;protein_id=WP_001194343.1;transl_table=11
NZ_CAAR01000326.1	RefSeq	pseudogene	2058	2958	.	-	.	ID=gene-STY7866_RS12920;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=pseudogene;locus_tag=STY7866_RS12920;pseudo=true
NZ_CAAR01000326.1	Protein Homology	CDS	2058	2958	.	-	0	ID=cds-STY7866_RS12920;Parent=gene-STY7866_RS12920;Note=frameshifted;gbkey=CDS;gene=hemF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456986.1;locus_tag=STY7866_RS12920;product=oxygen-dependent coproporphyrinogen oxidase;pseudo=true;transl_table=11
NZ_CAAR01000326.1	RefSeq	gene	2961	3830	.	-	.	ID=gene-STY7866_RS12925;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=STY7866_RS12925
NZ_CAAR01000326.1	Protein Homology	CDS	2961	3830	.	-	0	ID=cds-WP_000102880.1;Parent=gene-STY7866_RS12925;Dbxref=Genbank:WP_000102880.1;Name=WP_000102880.1;gbkey=CDS;gene=amiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456985.1;locus_tag=STY7866_RS12925;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102880.1;transl_table=11
NZ_CAAR01000326.1	RefSeq	gene	3932	4468	.	+	.	ID=gene-STY7866_RS12930;Name=STY7866_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12930
NZ_CAAR01000326.1	Protein Homology	CDS	3932	4468	.	+	0	ID=cds-WP_014344511.1;Parent=gene-STY7866_RS12930;Dbxref=Genbank:WP_014344511.1;Name=WP_014344511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461384.3;locus_tag=STY7866_RS12930;product=GNAT family acetyltransferase;protein_id=WP_014344511.1;transl_table=11
NZ_CAAR01000326.1	RefSeq	pseudogene	4455	4631	.	+	.	ID=gene-STY7866_RS12935;Name=STY7866_RS12935;end_range=4631,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12935;partial=true;pseudo=true
NZ_CAAR01000326.1	Protein Homology	CDS	4455	4631	.	+	0	ID=cds-STY7866_RS12935;Parent=gene-STY7866_RS12935;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4631,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456983.1;locus_tag=STY7866_RS12935;partial=true;product=DUF2919 family protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000325.1 1 2471
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000325.1	RefSeq	region	1	2471	.	+	.	ID=NZ_CAAR01000325.1:1..2471;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000325.1	RefSeq	pseudogene	1	1736	.	+	.	ID=gene-STY7866_RS12890;Name=STY7866_RS12890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12890;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000325.1	Protein Homology	CDS	1	1736	.	+	1	ID=cds-STY7866_RS12890;Parent=gene-STY7866_RS12890;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458618.1;locus_tag=STY7866_RS12890;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000325.1	RefSeq	gene	1726	1953	.	+	.	ID=gene-STY7866_RS12895;Name=STY7866_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12895
NZ_CAAR01000325.1	Protein Homology	CDS	1726	1953	.	+	0	ID=cds-WP_000020913.1;Parent=gene-STY7866_RS12895;Dbxref=Genbank:WP_000020913.1;Name=WP_000020913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000020911.1;locus_tag=STY7866_RS12895;product=hypothetical protein;protein_id=WP_000020913.1;transl_table=11
NZ_CAAR01000325.1	RefSeq	gene	1950	2210	.	+	.	ID=gene-STY7866_RS12900;Name=STY7866_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12900
NZ_CAAR01000325.1	Protein Homology	CDS	1950	2210	.	+	0	ID=cds-WP_000838568.1;Parent=gene-STY7866_RS12900;Dbxref=Genbank:WP_000838568.1;Name=WP_000838568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838568.1;locus_tag=STY7866_RS12900;product=hypothetical protein;protein_id=WP_000838568.1;transl_table=11
NZ_CAAR01000325.1	RefSeq	gene	2197	2471	.	+	.	ID=gene-STY7866_RS27290;Name=STY7866_RS27290;end_range=2471,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27290;partial=true
NZ_CAAR01000325.1	Protein Homology	CDS	2197	2471	.	+	0	ID=cds-WP_001275615.1;Parent=gene-STY7866_RS27290;Dbxref=Genbank:WP_001275615.1;Name=WP_001275615.1;end_range=2471,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001275616.1;locus_tag=STY7866_RS27290;partial=true;product=DUF2786 domain-containing protein;protein_id=WP_001275615.1;transl_table=11
##sequence-region NZ_CAAR01000324.1 1 12528
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000324.1	RefSeq	region	1	12528	.	+	.	ID=NZ_CAAR01000324.1:1..12528;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000324.1	RefSeq	gene	1	1477	.	-	.	ID=gene-STY7866_RS12830;Name=STY7866_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12830;partial=true;start_range=.,1
NZ_CAAR01000324.1	Protein Homology	CDS	1	1477	.	-	0	ID=cds-WP_024151061.1;Parent=gene-STY7866_RS12830;Dbxref=Genbank:WP_024151061.1;Name=WP_024151061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=STY7866_RS12830;partial=true;product=glucan biosynthesis protein;protein_id=WP_024151061.1;start_range=.,1;transl_table=11
NZ_CAAR01000324.1	RefSeq	gene	1697	3205	.	-	.	ID=gene-STY7866_RS12835;Name=STY7866_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12835
NZ_CAAR01000324.1	Protein Homology	CDS	1697	3205	.	-	0	ID=cds-WP_000933982.1;Parent=gene-STY7866_RS12835;Dbxref=Genbank:WP_000933982.1;Name=WP_000933982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455874.1;locus_tag=STY7866_RS12835;product=carboxylesterase/lipase family protein;protein_id=WP_000933982.1;transl_table=11
NZ_CAAR01000324.1	RefSeq	pseudogene	3254	4354	.	-	.	ID=gene-STY7866_RS12840;Name=STY7866_RS12840;end_range=4354,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12840;partial=true;pseudo=true
NZ_CAAR01000324.1	Protein Homology	CDS	3254	4354	.	-	0	ID=cds-STY7866_RS12840;Parent=gene-STY7866_RS12840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4354,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=STY7866_RS12840;partial=true;product=DUF1338 family protein;pseudo=true;transl_table=11
NZ_CAAR01000324.1	RefSeq	pseudogene	4355	4495	.	+	.	ID=gene-STY7866_RS27280;Name=STY7866_RS27280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27280;partial=true;pseudo=true;start_range=.,4355
NZ_CAAR01000324.1	Protein Homology	CDS	4355	4495	.	+	0	ID=cds-STY7866_RS27280;Parent=gene-STY7866_RS27280;Note=involved in bacterial survival in the host cell%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=STY7866_RS27280;partial=true;product=pathogenicity island 2 effector protein SseJ;pseudo=true;start_range=.,4355;transl_table=11
NZ_CAAR01000324.1	RefSeq	gene	4616	4960	.	-	.	ID=gene-STY7866_RS12845;Name=STY7866_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12845
NZ_CAAR01000324.1	Protein Homology	CDS	4616	4960	.	-	0	ID=cds-WP_000281194.1;Parent=gene-STY7866_RS12845;Dbxref=Genbank:WP_000281194.1;Name=WP_000281194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455872.1;locus_tag=STY7866_RS12845;product=DUF1294 domain-containing protein;protein_id=WP_000281194.1;transl_table=11
NZ_CAAR01000324.1	RefSeq	gene	5878	6639	.	+	.	ID=gene-STY7866_RS12850;Name=STY7866_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12850
NZ_CAAR01000324.1	Protein Homology	CDS	5878	6639	.	+	0	ID=cds-WP_000949382.1;Parent=gene-STY7866_RS12850;Dbxref=Genbank:WP_000949382.1;Name=WP_000949382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455871.1;locus_tag=STY7866_RS12850;product=transporter substrate-binding domain-containing protein;protein_id=WP_000949382.1;transl_table=11
NZ_CAAR01000324.1	RefSeq	gene	6646	7293	.	+	.	ID=gene-STY7866_RS12855;Name=STY7866_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12855
NZ_CAAR01000324.1	Protein Homology	CDS	6646	7293	.	+	0	ID=cds-WP_000094452.1;Parent=gene-STY7866_RS12855;Dbxref=Genbank:WP_000094452.1;Name=WP_000094452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455870.1;locus_tag=STY7866_RS12855;product=amino acid ABC transporter permease;protein_id=WP_000094452.1;transl_table=11
NZ_CAAR01000324.1	RefSeq	gene	7318	8049	.	+	.	ID=gene-STY7866_RS12860;Name=STY7866_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12860
NZ_CAAR01000324.1	Protein Homology	CDS	7318	8049	.	+	0	ID=cds-WP_001185897.1;Parent=gene-STY7866_RS12860;Dbxref=Genbank:WP_001185897.1;Name=WP_001185897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455869.1;locus_tag=STY7866_RS12860;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_001185897.1;transl_table=11
NZ_CAAR01000324.1	RefSeq	gene	8046	8726	.	+	.	ID=gene-STY7866_RS12865;Name=STY7866_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12865
NZ_CAAR01000324.1	Protein Homology	CDS	8046	8726	.	+	0	ID=cds-WP_000560165.1;Parent=gene-STY7866_RS12865;Dbxref=Genbank:WP_000560165.1;Name=WP_000560165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455868.1;locus_tag=STY7866_RS12865;product=amino acid ABC transporter permease;protein_id=WP_000560165.1;transl_table=11
NZ_CAAR01000324.1	RefSeq	gene	8863	10413	.	+	.	ID=gene-STY7866_RS12870;Name=STY7866_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12870
NZ_CAAR01000324.1	Protein Homology	CDS	8863	10413	.	+	0	ID=cds-WP_001764195.1;Parent=gene-STY7866_RS12870;Dbxref=Genbank:WP_001764195.1;Name=WP_001764195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455867.1;locus_tag=STY7866_RS12870;product=membrane protein;protein_id=WP_001764195.1;transl_table=11
NZ_CAAR01000324.1	RefSeq	gene	10877	11539	.	+	.	ID=gene-STY7866_RS12880;Name=STY7866_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12880
NZ_CAAR01000324.1	Protein Homology	CDS	10877	11539	.	+	0	ID=cds-WP_000683309.1;Parent=gene-STY7866_RS12880;Dbxref=Genbank:WP_000683309.1;Name=WP_000683309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576082.1;locus_tag=STY7866_RS12880;product=class I SAM-dependent methyltransferase;protein_id=WP_000683309.1;transl_table=11
NZ_CAAR01000324.1	RefSeq	pseudogene	11810	12340	.	-	.	ID=gene-STY7866_RS12885;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=pseudogene;locus_tag=STY7866_RS12885;pseudo=true
NZ_CAAR01000324.1	Protein Homology	CDS	11810	12340	.	-	0	ID=cds-STY7866_RS12885;Parent=gene-STY7866_RS12885;Note=internal stop;gbkey=CDS;gene=cybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=STY7866_RS12885;product=cytochrome b561;pseudo=true;transl_table=11
NZ_CAAR01000324.1	RefSeq	pseudogene	12457	12528	.	-	.	ID=gene-STY7866_RS27285;Name=STY7866_RS27285;end_range=12528,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27285;partial=true;pseudo=true
NZ_CAAR01000324.1	Protein Homology	CDS	12457	12528	.	-	0	ID=cds-STY7866_RS27285;Parent=gene-STY7866_RS27285;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=12528,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455864.1;locus_tag=STY7866_RS27285;partial=true;product=YdcF family protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000323.1 1 5394
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000323.1	RefSeq	region	1	5394	.	+	.	ID=NZ_CAAR01000323.1:1..5394;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000323.1	RefSeq	pseudogene	1	69	.	-	.	ID=gene-STY7866_RS27275;Name=STY7866_RS27275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27275;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000323.1	Protein Homology	CDS	1	69	.	-	0	ID=cds-STY7866_RS27275;Parent=gene-STY7866_RS27275;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456168.1;locus_tag=STY7866_RS27275;partial=true;product=endopeptidase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000323.1	RefSeq	gene	146	895	.	-	.	ID=gene-STY7866_RS12805;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=STY7866_RS12805
NZ_CAAR01000323.1	Protein Homology	CDS	146	895	.	-	0	ID=cds-WP_000080607.1;Parent=gene-STY7866_RS12805;Dbxref=Genbank:WP_000080607.1;Name=WP_000080607.1;gbkey=CDS;gene=btuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456169.1;locus_tag=STY7866_RS12805;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000080607.1;transl_table=11
NZ_CAAR01000323.1	RefSeq	gene	895	1446	.	-	.	ID=gene-STY7866_RS12810;Name=STY7866_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12810
NZ_CAAR01000323.1	Protein Homology	CDS	895	1446	.	-	0	ID=cds-WP_001181565.1;Parent=gene-STY7866_RS12810;Dbxref=Genbank:WP_001181565.1;Name=WP_001181565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456170.1;locus_tag=STY7866_RS12810;product=glutathione peroxidase;protein_id=WP_001181565.1;transl_table=11
NZ_CAAR01000323.1	RefSeq	pseudogene	1538	2517	.	-	.	ID=gene-STY7866_RS12815;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=pseudogene;locus_tag=STY7866_RS12815;pseudo=true
NZ_CAAR01000323.1	Protein Homology	CDS	1538	2517	.	-	0	ID=cds-STY7866_RS12815;Parent=gene-STY7866_RS12815;Note=frameshifted;gbkey=CDS;gene=btuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456171.1;locus_tag=STY7866_RS12815;product=vitamin B12 ABC transporter permease BtuC;pseudo=true;transl_table=11
NZ_CAAR01000323.1	RefSeq	gene	2721	3020	.	-	.	ID=gene-STY7866_RS12820;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=STY7866_RS12820
NZ_CAAR01000323.1	Protein Homology	CDS	2721	3020	.	-	0	ID=cds-WP_001229266.1;Parent=gene-STY7866_RS12820;Dbxref=Genbank:WP_001229266.1;Name=WP_001229266.1;gbkey=CDS;gene=ihfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456172.1;locus_tag=STY7866_RS12820;product=integration host factor subunit alpha;protein_id=WP_001229266.1;transl_table=11
NZ_CAAR01000323.1	RefSeq	gene	3025	5394	.	-	.	ID=gene-STY7866_RS12825;Name=pheT;end_range=5394,.;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=STY7866_RS12825;partial=true
NZ_CAAR01000323.1	Protein Homology	CDS	3025	5394	.	-	0	ID=cds-WP_000327042.1;Parent=gene-STY7866_RS12825;Dbxref=Genbank:WP_000327042.1;Name=WP_000327042.1;end_range=5394,.;gbkey=CDS;gene=pheT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012905611.1;locus_tag=STY7866_RS12825;partial=true;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000327042.1;transl_table=11
##sequence-region NZ_CAAR01000322.1 1 12715
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000322.1	RefSeq	region	1	12715	.	+	.	ID=NZ_CAAR01000322.1:1..12715;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000322.1	RefSeq	pseudogene	104	1056	.	-	.	ID=gene-STY7866_RS12745;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=pseudogene;locus_tag=STY7866_RS12745;pseudo=true
NZ_CAAR01000322.1	Protein Homology	CDS	104	1056	.	-	0	ID=cds-STY7866_RS12745;Parent=gene-STY7866_RS12745;Note=frameshifted;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457334.1;locus_tag=STY7866_RS12745;product=SPI-1 type III secretion system effector SopD;pseudo=true;transl_table=11
NZ_CAAR01000322.1	RefSeq	pseudogene	1437	4136	.	-	.	ID=gene-STY7866_RS12755;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=pseudogene;locus_tag=STY7866_RS12755;pseudo=true
NZ_CAAR01000322.1	Protein Homology	CDS	1437	4136	.	-	0	ID=cds-STY7866_RS12755;Parent=gene-STY7866_RS12755;Note=frameshifted;gbkey=CDS;gene=cas3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192071.1;locus_tag=STY7866_RS12755;product=CRISPR-associated helicase Cas3';pseudo=true;transl_table=11
NZ_CAAR01000322.1	RefSeq	gene	4494	6029	.	+	.	ID=gene-STY7866_RS12760;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;locus_tag=STY7866_RS12760
NZ_CAAR01000322.1	Protein Homology	CDS	4494	6029	.	+	0	ID=cds-WP_000366321.1;Parent=gene-STY7866_RS12760;Dbxref=Genbank:WP_000366321.1;Name=WP_000366321.1;gbkey=CDS;gene=casA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457332.1;locus_tag=STY7866_RS12760;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_000366321.1;transl_table=11
NZ_CAAR01000322.1	RefSeq	gene	6046	6648	.	+	.	ID=gene-STY7866_RS12765;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;locus_tag=STY7866_RS12765
NZ_CAAR01000322.1	Protein Homology	CDS	6046	6648	.	+	0	ID=cds-WP_000935107.1;Parent=gene-STY7866_RS12765;Dbxref=Genbank:WP_000935107.1;Name=WP_000935107.1;gbkey=CDS;gene=casB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457331.1;locus_tag=STY7866_RS12765;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_000935107.1;transl_table=11
NZ_CAAR01000322.1	RefSeq	gene	6665	7729	.	+	.	ID=gene-STY7866_RS12770;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=STY7866_RS12770
NZ_CAAR01000322.1	Protein Homology	CDS	6665	7729	.	+	0	ID=cds-WP_000606123.1;Parent=gene-STY7866_RS12770;Dbxref=Genbank:WP_000606123.1;Name=WP_000606123.1;gbkey=CDS;gene=cas7e;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457330.1;locus_tag=STY7866_RS12770;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_000606123.1;transl_table=11
NZ_CAAR01000322.1	RefSeq	gene	7739	8464	.	+	.	ID=gene-STY7866_RS12775;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=STY7866_RS12775
NZ_CAAR01000322.1	Protein Homology	CDS	7739	8464	.	+	0	ID=cds-WP_000666425.1;Parent=gene-STY7866_RS12775;Dbxref=Genbank:WP_000666425.1;Name=WP_000666425.1;gbkey=CDS;gene=cas5e;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457329.1;locus_tag=STY7866_RS12775;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_000666425.1;transl_table=11
NZ_CAAR01000322.1	RefSeq	gene	8464	9168	.	+	.	ID=gene-STY7866_RS12780;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=STY7866_RS12780
NZ_CAAR01000322.1	Protein Homology	CDS	8464	9168	.	+	0	ID=cds-WP_000281411.1;Parent=gene-STY7866_RS12780;Dbxref=Genbank:WP_000281411.1;Name=WP_000281411.1;gbkey=CDS;gene=cas6e;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457328.1;locus_tag=STY7866_RS12780;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_000281411.1;transl_table=11
NZ_CAAR01000322.1	RefSeq	gene	9168	10085	.	+	.	ID=gene-STY7866_RS12785;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=STY7866_RS12785
NZ_CAAR01000322.1	Protein Homology	CDS	9168	10085	.	+	0	ID=cds-WP_000118669.1;Parent=gene-STY7866_RS12785;Dbxref=Genbank:WP_000118669.1;Name=WP_000118669.1;gbkey=CDS;gene=cas1e;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457327.1;locus_tag=STY7866_RS12785;product=type I-E CRISPR-associated endonuclease Cas1;protein_id=WP_000118669.1;transl_table=11
NZ_CAAR01000322.1	RefSeq	gene	10088	10381	.	+	.	ID=gene-STY7866_RS12790;Name=STY7866_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12790
NZ_CAAR01000322.1	Protein Homology	CDS	10088	10381	.	+	0	ID=cds-WP_000062282.1;Parent=gene-STY7866_RS12790;Dbxref=Genbank:WP_000062282.1;Name=WP_000062282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457326.1;locus_tag=STY7866_RS12790;product=type I-E CRISPR-associated endoribonuclease Cas2;protein_id=WP_000062282.1;transl_table=11
NZ_CAAR01000322.1	RefSeq	direct_repeat	10466	10677	.	+	.	ID=id-NZ_CAAR01000322.1:10466..10677;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=10466..10494;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg
NZ_CAAR01000322.1	RefSeq	gene	10692	11738	.	-	.	ID=gene-STY7866_RS12795;Name=STY7866_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12795
NZ_CAAR01000322.1	Protein Homology	CDS	10692	11738	.	-	0	ID=cds-WP_000490486.1;Parent=gene-STY7866_RS12795;Dbxref=Genbank:WP_000490486.1;Name=WP_000490486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457325.1;locus_tag=STY7866_RS12795;product=aminopeptidase;protein_id=WP_000490486.1;transl_table=11
NZ_CAAR01000322.1	RefSeq	gene	11989	12715	.	+	.	ID=gene-STY7866_RS12800;Name=cysD;end_range=12715,.;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=STY7866_RS12800;partial=true
NZ_CAAR01000322.1	Protein Homology	CDS	11989	12715	.	+	0	ID=cds-WP_000372382.1;Parent=gene-STY7866_RS12800;Dbxref=Genbank:WP_000372382.1;Name=WP_000372382.1;end_range=12715,.;gbkey=CDS;gene=cysD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=STY7866_RS12800;partial=true;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372382.1;transl_table=11
##sequence-region NZ_CAAR01000321.1 1 7305
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000321.1	RefSeq	region	1	7305	.	+	.	ID=NZ_CAAR01000321.1:1..7305;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000321.1	RefSeq	gene	265	549	.	+	.	ID=gene-STY7866_RS12710;Name=STY7866_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12710
NZ_CAAR01000321.1	Protein Homology	CDS	265	549	.	+	0	ID=cds-WP_000030904.1;Parent=gene-STY7866_RS12710;Dbxref=Genbank:WP_000030904.1;Name=WP_000030904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=STY7866_RS12710;product=YfcZ/YiiS family protein;protein_id=WP_000030904.1;transl_table=11
NZ_CAAR01000321.1	RefSeq	gene	727	2037	.	+	.	ID=gene-STY7866_RS12715;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=STY7866_RS12715
NZ_CAAR01000321.1	Protein Homology	CDS	727	2037	.	+	0	ID=cds-WP_001248134.1;Parent=gene-STY7866_RS12715;Dbxref=Genbank:WP_001248134.1;Name=WP_001248134.1;gbkey=CDS;gene=fadI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456930.1;locus_tag=STY7866_RS12715;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_001248134.1;transl_table=11
NZ_CAAR01000321.1	RefSeq	gene	2037	4184	.	+	.	ID=gene-STY7866_RS12720;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=STY7866_RS12720
NZ_CAAR01000321.1	Protein Homology	CDS	2037	4184	.	+	0	ID=cds-WP_000214156.1;Parent=gene-STY7866_RS12720;Dbxref=Genbank:WP_000214156.1;Name=WP_000214156.1;gbkey=CDS;gene=fadJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456929.1;locus_tag=STY7866_RS12720;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_000214156.1;transl_table=11
NZ_CAAR01000321.1	RefSeq	gene	4393	4878	.	+	.	ID=gene-STY7866_RS12725;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=STY7866_RS12725
NZ_CAAR01000321.1	Protein Homology	CDS	4393	4878	.	+	0	ID=cds-WP_001195808.1;Parent=gene-STY7866_RS12725;Dbxref=Genbank:WP_001195808.1;Name=WP_001195808.1;gbkey=CDS;gene=sixA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456928.1;locus_tag=STY7866_RS12725;product=phosphohistidine phosphatase SixA;protein_id=WP_001195808.1;transl_table=11
NZ_CAAR01000321.1	RefSeq	gene	4927	5478	.	-	.	ID=gene-STY7866_RS12730;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=STY7866_RS12730
NZ_CAAR01000321.1	Protein Homology	CDS	4927	5478	.	-	0	ID=cds-WP_000730794.1;Parent=gene-STY7866_RS12730;Dbxref=Genbank:WP_000730794.1;Name=WP_000730794.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456927.1;locus_tag=STY7866_RS12730;product=endonuclease SmrB;protein_id=WP_000730794.1;transl_table=11
NZ_CAAR01000321.1	RefSeq	gene	5644	6576	.	+	.	ID=gene-STY7866_RS12735;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=STY7866_RS12735
NZ_CAAR01000321.1	Protein Homology	CDS	5644	6576	.	+	0	ID=cds-WP_001542329.1;Parent=gene-STY7866_RS12735;Dbxref=Genbank:WP_001542329.1;Name=WP_001542329.1;gbkey=CDS;gene=prmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=STY7866_RS12735;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001542329.1;transl_table=11
NZ_CAAR01000321.1	RefSeq	pseudogene	6612	7305	.	+	.	ID=gene-STY7866_RS12740;Name=aroC;end_range=7305,.;gbkey=Gene;gene=aroC;gene_biotype=pseudogene;locus_tag=STY7866_RS12740;partial=true;pseudo=true
NZ_CAAR01000321.1	Protein Homology	CDS	6612	7305	.	+	0	ID=cds-STY7866_RS12740;Parent=gene-STY7866_RS12740;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=7305,.;gbkey=CDS;gene=aroC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=STY7866_RS12740;partial=true;product=chorismate synthase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000320.1 1 2978
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000320.1	RefSeq	region	1	2978	.	+	.	ID=NZ_CAAR01000320.1:1..2978;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000320.1	RefSeq	gene	1	479	.	+	.	ID=gene-STY7866_RS12690;Name=STY7866_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12690;partial=true;start_range=.,1
NZ_CAAR01000320.1	Protein Homology	CDS	1	479	.	+	2	ID=cds-WP_000300397.1;Parent=gene-STY7866_RS12690;Dbxref=Genbank:WP_000300397.1;Name=WP_000300397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457528.1;locus_tag=STY7866_RS12690;partial=true;product=amidohydrolase;protein_id=WP_000300397.1;start_range=.,1;transl_table=11
NZ_CAAR01000320.1	RefSeq	gene	518	1441	.	+	.	ID=gene-STY7866_RS12695;Name=STY7866_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12695
NZ_CAAR01000320.1	Protein Homology	CDS	518	1441	.	+	0	ID=cds-WP_000540892.1;Parent=gene-STY7866_RS12695;Dbxref=Genbank:WP_000540892.1;Name=WP_000540892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457527.1;locus_tag=STY7866_RS12695;product=polysaccharide deacetylase;protein_id=WP_000540892.1;transl_table=11
NZ_CAAR01000320.1	RefSeq	gene	2167	2652	.	+	.	ID=gene-STY7866_RS12700;Name=STY7866_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12700
NZ_CAAR01000320.1	Protein Homology	CDS	2167	2652	.	+	0	ID=cds-WP_000338756.1;Parent=gene-STY7866_RS12700;Dbxref=Genbank:WP_000338756.1;Name=WP_000338756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457526.1;locus_tag=STY7866_RS12700;product=type VI secretion system tube protein Hcp;protein_id=WP_000338756.1;transl_table=11
NZ_CAAR01000320.1	RefSeq	gene	2652	2978	.	+	.	ID=gene-STY7866_RS26420;Name=iraD;end_range=2978,.;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=STY7866_RS26420;partial=true
NZ_CAAR01000320.1	Protein Homology	CDS	2652	2978	.	+	0	ID=cds-WP_049783579.1;Parent=gene-STY7866_RS26420;Dbxref=Genbank:WP_049783579.1;Name=WP_049783579.1;end_range=2978,.;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=STY7866_RS26420;partial=true;product=anti-adapter protein IraD;protein_id=WP_049783579.1;transl_table=11
##sequence-region NZ_CAAR01000319.1 1 3122
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000319.1	RefSeq	region	1	3122	.	+	.	ID=NZ_CAAR01000319.1:1..3122;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000319.1	RefSeq	pseudogene	471	2341	.	+	.	ID=gene-STY7866_RS12675;Name=STY7866_RS12675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12675;pseudo=true
NZ_CAAR01000319.1	Protein Homology	CDS	471	2341	.	+	0	ID=cds-STY7866_RS12675;Parent=gene-STY7866_RS12675;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001274790.1;locus_tag=STY7866_RS12675;product=sulfatase-like hydrolase/transferase;pseudo=true;transl_table=11
NZ_CAAR01000319.1	RefSeq	gene	2748	3122	.	+	.	ID=gene-STY7866_RS12685;Name=kefF;end_range=3122,.;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=STY7866_RS12685;partial=true
NZ_CAAR01000319.1	Protein Homology	CDS	2748	3122	.	+	0	ID=cds-WP_000600695.1;Parent=gene-STY7866_RS12685;Dbxref=Genbank:WP_000600695.1;Name=WP_000600695.1;end_range=3122,.;gbkey=CDS;gene=kefF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454697.1;locus_tag=STY7866_RS12685;partial=true;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600695.1;transl_table=11
##sequence-region NZ_CAAR01000318.1 1 2522
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000318.1	RefSeq	region	1	2522	.	+	.	ID=NZ_CAAR01000318.1:1..2522;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000318.1	RefSeq	gene	1	1043	.	+	.	ID=gene-STY7866_RS12660;Name=STY7866_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12660;partial=true;start_range=.,1
NZ_CAAR01000318.1	Protein Homology	CDS	1	1043	.	+	2	ID=cds-WP_000294718.1;Parent=gene-STY7866_RS12660;Dbxref=Genbank:WP_000294718.1;Name=WP_000294718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456808.1;locus_tag=STY7866_RS12660;partial=true;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_000294718.1;start_range=.,1;transl_table=11
NZ_CAAR01000318.1	RefSeq	gene	1252	1746	.	-	.	ID=gene-STY7866_RS12665;Name=STY7866_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12665
NZ_CAAR01000318.1	Protein Homology	CDS	1252	1746	.	-	0	ID=cds-WP_001764187.1;Parent=gene-STY7866_RS12665;Dbxref=Genbank:WP_001764187.1;Name=WP_001764187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456807.1;locus_tag=STY7866_RS12665;product=serine protease inhibitor ecotin;protein_id=WP_001764187.1;transl_table=11
NZ_CAAR01000318.1	RefSeq	gene	2160	2522	.	+	.	ID=gene-STY7866_RS12670;Name=napF;end_range=2522,.;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=STY7866_RS12670;partial=true
NZ_CAAR01000318.1	Protein Homology	CDS	2160	2522	.	+	0	ID=cds-WP_031626353.1;Parent=gene-STY7866_RS12670;Dbxref=Genbank:WP_031626353.1;Name=WP_031626353.1;end_range=2522,.;gbkey=CDS;gene=napF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456806.1;locus_tag=STY7866_RS12670;partial=true;product=ferredoxin-type protein NapF;protein_id=WP_031626353.1;transl_table=11
##sequence-region NZ_CAAR01000317.1 1 15126
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000317.1	RefSeq	region	1	15126	.	+	.	ID=NZ_CAAR01000317.1:1..15126;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000317.1	RefSeq	gene	81	1262	.	-	.	ID=gene-STY7866_RS12585;Name=STY7866_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12585
NZ_CAAR01000317.1	Protein Homology	CDS	81	1262	.	-	0	ID=cds-WP_000336171.1;Parent=gene-STY7866_RS12585;Dbxref=Genbank:WP_000336171.1;Name=WP_000336171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455935.1;locus_tag=STY7866_RS12585;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_000336171.1;transl_table=11
NZ_CAAR01000317.1	RefSeq	pseudogene	1258	1958	.	-	.	ID=gene-STY7866_RS12590;Name=STY7866_RS12590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12590;partial=true;pseudo=true;start_range=.,1258
NZ_CAAR01000317.1	Protein Homology	CDS	1258	1958	.	-	0	ID=cds-STY7866_RS12590;Parent=gene-STY7866_RS12590;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=STY7866_RS12590;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1258;transl_table=11
NZ_CAAR01000317.1	RefSeq	pseudogene	2024	3115	.	+	.	ID=gene-STY7866_RS12595;Name=STY7866_RS12595;end_range=3115,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12595;partial=true;pseudo=true
NZ_CAAR01000317.1	Protein Homology	CDS	2024	3115	.	+	0	ID=cds-STY7866_RS12595;Parent=gene-STY7866_RS12595;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3115,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460513.1;locus_tag=STY7866_RS12595;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000317.1	RefSeq	gene	3308	3607	.	-	.	ID=gene-STY7866_RS12600;Name=STY7866_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12600
NZ_CAAR01000317.1	Protein Homology	CDS	3308	3607	.	-	0	ID=cds-WP_000381837.1;Parent=gene-STY7866_RS12600;Dbxref=Genbank:WP_000381837.1;Name=WP_000381837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000381837.1;locus_tag=STY7866_RS12600;product=DUF1493 family protein;protein_id=WP_000381837.1;transl_table=11
NZ_CAAR01000317.1	RefSeq	pseudogene	3761	3889	.	+	.	ID=gene-STY7866_RS12605;Name=STY7866_RS12605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12605;partial=true;pseudo=true;start_range=.,3761
NZ_CAAR01000317.1	Protein Homology	CDS	3761	3889	.	+	0	ID=cds-STY7866_RS12605;Parent=gene-STY7866_RS12605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=STY7866_RS12605;partial=true;product=type II toxin-antitoxin system mRNA interferase toxin%2C RelE/StbE family;pseudo=true;start_range=.,3761;transl_table=11
NZ_CAAR01000317.1	RefSeq	gene	3889	4005	.	+	.	ID=gene-STY7866_RS27270;Name=STY7866_RS27270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27270
NZ_CAAR01000317.1	Protein Homology	CDS	3889	4005	.	+	0	ID=cds-WP_001759159.1;Parent=gene-STY7866_RS27270;Dbxref=Genbank:WP_001759159.1;Name=WP_001759159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728245.1;locus_tag=STY7866_RS27270;product=hypothetical protein;protein_id=WP_001759159.1;transl_table=11
NZ_CAAR01000317.1	RefSeq	gene	4057	5136	.	-	.	ID=gene-STY7866_RS12610;Name=STY7866_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12610
NZ_CAAR01000317.1	Protein Homology	CDS	4057	5136	.	-	0	ID=cds-WP_000954693.1;Parent=gene-STY7866_RS12610;Dbxref=Genbank:WP_000954693.1;Name=WP_000954693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455938.1;locus_tag=STY7866_RS12610;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_000954693.1;transl_table=11
NZ_CAAR01000317.1	RefSeq	gene	5318	5806	.	-	.	ID=gene-STY7866_RS12615;Name=STY7866_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12615
NZ_CAAR01000317.1	Protein Homology	CDS	5318	5806	.	-	0	ID=cds-WP_001293639.1;Parent=gene-STY7866_RS12615;Dbxref=Genbank:WP_001293639.1;Name=WP_001293639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455939.1;locus_tag=STY7866_RS12615;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_001293639.1;transl_table=11
NZ_CAAR01000317.1	RefSeq	pseudogene	5851	7013	.	+	.	ID=gene-STY7866_RS12620;Name=STY7866_RS12620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12620;pseudo=true
NZ_CAAR01000317.1	Protein Homology	CDS	5851	7013	.	+	0	ID=cds-STY7866_RS12620;Parent=gene-STY7866_RS12620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=STY7866_RS12620;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000317.1	RefSeq	gene	7003	8244	.	+	.	ID=gene-STY7866_RS12625;Name=STY7866_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12625
NZ_CAAR01000317.1	Protein Homology	CDS	7003	8244	.	+	0	ID=cds-WP_001095727.1;Parent=gene-STY7866_RS12625;Dbxref=Genbank:WP_001095727.1;Name=WP_001095727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455940.1;locus_tag=STY7866_RS12625;product=MFS transporter;protein_id=WP_001095727.1;transl_table=11
NZ_CAAR01000317.1	RefSeq	gene	8314	9870	.	+	.	ID=gene-STY7866_RS12630;Name=STY7866_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12630
NZ_CAAR01000317.1	Protein Homology	CDS	8314	9870	.	+	0	ID=cds-WP_000476914.1;Parent=gene-STY7866_RS12630;Dbxref=Genbank:WP_000476914.1;Name=WP_000476914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455941.1;locus_tag=STY7866_RS12630;product=PhoPQ-regulated protein;protein_id=WP_000476914.1;transl_table=11
NZ_CAAR01000317.1	RefSeq	gene	10047	11333	.	+	.	ID=gene-STY7866_RS12635;Name=STY7866_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12635
NZ_CAAR01000317.1	Protein Homology	CDS	10047	11333	.	+	0	ID=cds-WP_000824230.1;Parent=gene-STY7866_RS12635;Dbxref=Genbank:WP_000824230.1;Name=WP_000824230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455942.1;locus_tag=STY7866_RS12635;product=MFS transporter;protein_id=WP_000824230.1;transl_table=11
NZ_CAAR01000317.1	RefSeq	gene	11308	12333	.	+	.	ID=gene-STY7866_RS12640;Name=STY7866_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12640
NZ_CAAR01000317.1	Protein Homology	CDS	11308	12333	.	+	0	ID=cds-WP_000864932.1;Parent=gene-STY7866_RS12640;Dbxref=Genbank:WP_000864932.1;Name=WP_000864932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455943.1;locus_tag=STY7866_RS12640;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_000864932.1;transl_table=11
NZ_CAAR01000317.1	RefSeq	gene	12392	13183	.	-	.	ID=gene-STY7866_RS12645;Name=STY7866_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12645
NZ_CAAR01000317.1	Protein Homology	CDS	12392	13183	.	-	0	ID=cds-WP_001518759.1;Parent=gene-STY7866_RS12645;Dbxref=Genbank:WP_001518759.1;Name=WP_001518759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455944.1;locus_tag=STY7866_RS12645;product=FadR family transcriptional regulator;protein_id=WP_001518759.1;transl_table=11
NZ_CAAR01000317.1	RefSeq	gene	13229	14320	.	-	.	ID=gene-STY7866_RS12650;Name=STY7866_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12650
NZ_CAAR01000317.1	Protein Homology	CDS	13229	14320	.	-	0	ID=cds-WP_000976508.1;Parent=gene-STY7866_RS12650;Dbxref=Genbank:WP_000976508.1;Name=WP_000976508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455945.1;locus_tag=STY7866_RS12650;product=linear amide C-N hydrolase;protein_id=WP_000976508.1;transl_table=11
NZ_CAAR01000317.1	RefSeq	gene	14748	15126	.	+	.	ID=gene-STY7866_RS12655;Name=STY7866_RS12655;end_range=15126,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12655;partial=true
NZ_CAAR01000317.1	Protein Homology	CDS	14748	15126	.	+	0	ID=cds-WP_151260002.1;Parent=gene-STY7866_RS12655;Dbxref=Genbank:WP_151260002.1;Name=WP_151260002.1;end_range=15126,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455946.1;locus_tag=STY7866_RS12655;partial=true;product=hydrogenase small subunit;protein_id=WP_151260002.1;transl_table=11
##sequence-region NZ_CAAR01000316.1 1 8349
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000316.1	RefSeq	region	1	8349	.	+	.	ID=NZ_CAAR01000316.1:1..8349;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000316.1	RefSeq	gene	1	338	.	+	.	ID=gene-STY7866_RS12540;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=STY7866_RS12540;partial=true;start_range=.,1
NZ_CAAR01000316.1	Protein Homology	CDS	1	338	.	+	2	ID=cds-WP_000303649.1;Parent=gene-STY7866_RS12540;Dbxref=Genbank:WP_000303649.1;Name=WP_000303649.1;gbkey=CDS;gene=zipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456965.1;locus_tag=STY7866_RS12540;partial=true;product=cell division protein ZipA;protein_id=WP_000303649.1;start_range=.,1;transl_table=11
NZ_CAAR01000316.1	RefSeq	gene	409	2424	.	+	.	ID=gene-STY7866_RS12545;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=STY7866_RS12545
NZ_CAAR01000316.1	Protein Homology	CDS	409	2424	.	+	0	ID=cds-WP_000433257.1;Parent=gene-STY7866_RS12545;Dbxref=Genbank:WP_000433257.1;Name=WP_000433257.1;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456964.1;locus_tag=STY7866_RS12545;product=NAD-dependent DNA ligase LigA;protein_id=WP_000433257.1;transl_table=11
NZ_CAAR01000316.1	RefSeq	gene	2426	2644	.	+	.	ID=gene-STY7866_RS12550;Name=STY7866_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12550
NZ_CAAR01000316.1	Protein Homology	CDS	2426	2644	.	+	0	ID=cds-WP_001682115.1;Parent=gene-STY7866_RS12550;Dbxref=Genbank:WP_001682115.1;Name=WP_001682115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=STY7866_RS12550;product=hypothetical protein;protein_id=WP_001682115.1;transl_table=11
NZ_CAAR01000316.1	RefSeq	gene	2641	3639	.	-	.	ID=gene-STY7866_RS12555;Name=STY7866_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12555
NZ_CAAR01000316.1	Protein Homology	CDS	2641	3639	.	-	0	ID=cds-WP_000765569.1;Parent=gene-STY7866_RS12555;Dbxref=Genbank:WP_000765569.1;Name=WP_000765569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456962.1;locus_tag=STY7866_RS12555;product=bile acid:sodium symporter;protein_id=WP_000765569.1;transl_table=11
NZ_CAAR01000316.1	RefSeq	gene	3729	4655	.	+	.	ID=gene-STY7866_RS12560;Name=STY7866_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12560
NZ_CAAR01000316.1	Protein Homology	CDS	3729	4655	.	+	0	ID=cds-WP_001109831.1;Parent=gene-STY7866_RS12560;Dbxref=Genbank:WP_001109831.1;Name=WP_001109831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=STY7866_RS12560;product=LysR family transcriptional regulator;protein_id=WP_001109831.1;transl_table=11
NZ_CAAR01000316.1	RefSeq	gene	4718	5479	.	-	.	ID=gene-STY7866_RS12565;Name=STY7866_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12565
NZ_CAAR01000316.1	Protein Homology	CDS	4718	5479	.	-	0	ID=cds-WP_000722932.1;Parent=gene-STY7866_RS12565;Dbxref=Genbank:WP_000722932.1;Name=WP_000722932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456960.1;locus_tag=STY7866_RS12565;product=membrane protein;protein_id=WP_000722932.1;transl_table=11
NZ_CAAR01000316.1	RefSeq	gene	5735	6568	.	+	.	ID=gene-STY7866_RS12570;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=STY7866_RS12570
NZ_CAAR01000316.1	Protein Homology	CDS	5735	6568	.	+	0	ID=cds-WP_001119752.1;Parent=gene-STY7866_RS12570;Dbxref=Genbank:WP_001119752.1;Name=WP_001119752.1;gbkey=CDS;gene=xapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456959.1;locus_tag=STY7866_RS12570;product=xanthosine phosphorylase;protein_id=WP_001119752.1;transl_table=11
NZ_CAAR01000316.1	RefSeq	pseudogene	6623	7878	.	+	.	ID=gene-STY7866_RS12575;Name=STY7866_RS12575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12575;pseudo=true
NZ_CAAR01000316.1	Protein Homology	CDS	6623	7878	.	+	0	ID=cds-STY7866_RS12575;Parent=gene-STY7866_RS12575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456958.1;locus_tag=STY7866_RS12575;product=nucleoside permease;pseudo=true;transl_table=11
NZ_CAAR01000316.1	RefSeq	gene	7937	8095	.	+	.	ID=gene-STY7866_RS12580;Name=STY7866_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12580
NZ_CAAR01000316.1	Protein Homology	CDS	7937	8095	.	+	0	ID=cds-WP_000658727.1;Parent=gene-STY7866_RS12580;Dbxref=Genbank:WP_000658727.1;Name=WP_000658727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991992.1;locus_tag=STY7866_RS12580;product=DUF1427 family protein;protein_id=WP_000658727.1;transl_table=11
NZ_CAAR01000316.1	RefSeq	gene	8147	8349	.	+	.	ID=gene-STY7866_RS27265;Name=STY7866_RS27265;end_range=8349,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27265;partial=true
NZ_CAAR01000316.1	Protein Homology	CDS	8147	8349	.	+	0	ID=cds-WP_000438880.1;Parent=gene-STY7866_RS27265;Dbxref=Genbank:WP_000438880.1;Name=WP_000438880.1;end_range=8349,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456957.1;locus_tag=STY7866_RS27265;partial=true;product=LysR family transcriptional regulator;protein_id=WP_000438880.1;transl_table=11
##sequence-region NZ_CAAR01000315.1 1 3916
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000315.1	RefSeq	region	1	3916	.	+	.	ID=NZ_CAAR01000315.1:1..3916;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000315.1	RefSeq	gene	1	549	.	-	.	ID=gene-STY7866_RS12510;Name=STY7866_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12510;partial=true;start_range=.,1
NZ_CAAR01000315.1	Protein Homology	CDS	1	549	.	-	0	ID=cds-WP_000946050.1;Parent=gene-STY7866_RS12510;Dbxref=Genbank:WP_000946050.1;Name=WP_000946050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454781.1;locus_tag=STY7866_RS12510;partial=true;product=multicopper oxidase domain-containing protein;protein_id=WP_000946050.1;start_range=.,1;transl_table=11
NZ_CAAR01000315.1	RefSeq	gene	751	1098	.	+	.	ID=gene-STY7866_RS12515;Name=STY7866_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12515
NZ_CAAR01000315.1	Protein Homology	CDS	751	1098	.	+	0	ID=cds-WP_000846613.1;Parent=gene-STY7866_RS12515;Dbxref=Genbank:WP_000846613.1;Name=WP_000846613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=STY7866_RS12515;product=YacC family pilotin-like protein;protein_id=WP_000846613.1;transl_table=11
NZ_CAAR01000315.1	RefSeq	gene	1205	2065	.	+	.	ID=gene-STY7866_RS12520;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=STY7866_RS12520
NZ_CAAR01000315.1	Protein Homology	CDS	1205	2065	.	+	0	ID=cds-WP_000829972.1;Parent=gene-STY7866_RS12520;Dbxref=Genbank:WP_000829972.1;Name=WP_000829972.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454779.1;locus_tag=STY7866_RS12520;product=polyamine aminopropyltransferase;protein_id=WP_000829972.1;transl_table=11
NZ_CAAR01000315.1	RefSeq	gene	2086	2880	.	+	.	ID=gene-STY7866_RS12525;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=STY7866_RS12525
NZ_CAAR01000315.1	Protein Homology	CDS	2086	2880	.	+	0	ID=cds-WP_000734279.1;Parent=gene-STY7866_RS12525;Dbxref=Genbank:WP_000734279.1;Name=WP_000734279.1;gbkey=CDS;gene=speD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454778.1;locus_tag=STY7866_RS12525;product=adenosylmethionine decarboxylase;protein_id=WP_000734279.1;transl_table=11
NZ_CAAR01000315.1	RefSeq	gene	2910	3677	.	-	.	ID=gene-STY7866_RS12530;Name=STY7866_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12530
NZ_CAAR01000315.1	Protein Homology	CDS	2910	3677	.	-	0	ID=cds-WP_000678254.1;Parent=gene-STY7866_RS12530;Dbxref=Genbank:WP_000678254.1;Name=WP_000678254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454777.1;locus_tag=STY7866_RS12530;product=DeoR/GlpR transcriptional regulator;protein_id=WP_000678254.1;transl_table=11
NZ_CAAR01000315.1	RefSeq	pseudogene	3687	3916	.	-	.	ID=gene-STY7866_RS12535;Name=STY7866_RS12535;end_range=3916,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12535;partial=true;pseudo=true
NZ_CAAR01000315.1	Protein Homology	CDS	3687	3916	.	-	2	ID=cds-STY7866_RS12535;Parent=gene-STY7866_RS12535;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3916,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454776.1;locus_tag=STY7866_RS12535;partial=true;product=4-phospho-D-threonate 3-dehydrogenase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000314.1 1 27350
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000314.1	RefSeq	region	1	27350	.	+	.	ID=NZ_CAAR01000314.1:1..27350;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000314.1	RefSeq	pseudogene	1	954	.	+	.	ID=gene-STY7866_RS12375;Name=STY7866_RS12375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12375;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000314.1	Protein Homology	CDS	1	954	.	+	0	ID=cds-STY7866_RS12375;Parent=gene-STY7866_RS12375;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159092.1;locus_tag=STY7866_RS12375;partial=true;product=IMP dehydrogenase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	1024	2601	.	+	.	ID=gene-STY7866_RS12380;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=STY7866_RS12380
NZ_CAAR01000314.1	Protein Homology	CDS	1024	2601	.	+	0	ID=cds-WP_000138293.1;Parent=gene-STY7866_RS12380;Dbxref=Genbank:WP_000138293.1;Name=WP_000138293.1;gbkey=CDS;gene=guaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=STY7866_RS12380;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138293.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	2925	3614	.	-	.	ID=gene-STY7866_RS12390;Name=STY7866_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12390
NZ_CAAR01000314.1	Protein Homology	CDS	2925	3614	.	-	0	ID=cds-WP_001764183.1;Parent=gene-STY7866_RS12390;Dbxref=Genbank:WP_001764183.1;Name=WP_001764183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764183.1;locus_tag=STY7866_RS12390;product=hypothetical protein;protein_id=WP_001764183.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	3843	4382	.	-	.	ID=gene-STY7866_RS12395;Name=STY7866_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12395
NZ_CAAR01000314.1	Protein Homology	CDS	3843	4382	.	-	0	ID=cds-WP_000755800.1;Parent=gene-STY7866_RS12395;Dbxref=Genbank:WP_000755800.1;Name=WP_000755800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457041.1;locus_tag=STY7866_RS12395;product=hypothetical protein;protein_id=WP_000755800.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	4398	4898	.	-	.	ID=gene-STY7866_RS12400;Name=STY7866_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12400
NZ_CAAR01000314.1	Protein Homology	CDS	4398	4898	.	-	0	ID=cds-WP_151260000.1;Parent=gene-STY7866_RS12400;Dbxref=Genbank:WP_151260000.1;Name=WP_151260000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506172.1;locus_tag=STY7866_RS12400;product=glycine zipper 2TM domain-containing protein;protein_id=WP_151260000.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	5157	5330	.	-	.	ID=gene-STY7866_RS12405;Name=STY7866_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12405
NZ_CAAR01000314.1	Protein Homology	CDS	5157	5330	.	-	0	ID=cds-WP_001231515.1;Parent=gene-STY7866_RS12405;Dbxref=Genbank:WP_001231515.1;Name=WP_001231515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311393.2;locus_tag=STY7866_RS12405;product=DUF2633 family protein;protein_id=WP_001231515.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	5527	5664	.	+	.	ID=gene-STY7866_RS12410;Name=STY7866_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12410
NZ_CAAR01000314.1	Protein Homology	CDS	5527	5664	.	+	0	ID=cds-WP_001581698.1;Parent=gene-STY7866_RS12410;Dbxref=Genbank:WP_001581698.1;Name=WP_001581698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=STY7866_RS12410;product=hypothetical protein;protein_id=WP_001581698.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	pseudogene	5761	7975	.	+	.	ID=gene-STY7866_RS12415;Name=STY7866_RS12415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12415;pseudo=true
NZ_CAAR01000314.1	Protein Homology	CDS	5761	7975	.	+	0	ID=cds-STY7866_RS12415;Parent=gene-STY7866_RS12415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457038.1;locus_tag=STY7866_RS12415;product=sensor domain-containing phosphodiesterase;pseudo=true;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	8011	9552	.	-	.	ID=gene-STY7866_RS12420;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=STY7866_RS12420
NZ_CAAR01000314.1	Protein Homology	CDS	8011	9552	.	-	0	ID=cds-WP_001123330.1;Parent=gene-STY7866_RS12420;Dbxref=Genbank:WP_001123330.1;Name=WP_001123330.1;gbkey=CDS;gene=ppx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457037.1;locus_tag=STY7866_RS12420;product=exopolyphosphatase;protein_id=WP_001123330.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	9557	11623	.	-	.	ID=gene-STY7866_RS12425;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=STY7866_RS12425
NZ_CAAR01000314.1	Protein Homology	CDS	9557	11623	.	-	0	ID=cds-WP_000529558.1;Parent=gene-STY7866_RS12425;Dbxref=Genbank:WP_000529558.1;Name=WP_000529558.1;gbkey=CDS;gene=ppk1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457036.1;locus_tag=STY7866_RS12425;product=polyphosphate kinase 1;protein_id=WP_000529558.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	11812	12450	.	-	.	ID=gene-STY7866_RS12430;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=STY7866_RS12430
NZ_CAAR01000314.1	Protein Homology	CDS	11812	12450	.	-	0	ID=cds-WP_001028592.1;Parent=gene-STY7866_RS12430;Dbxref=Genbank:WP_001028592.1;Name=WP_001028592.1;gbkey=CDS;gene=purN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457035.1;locus_tag=STY7866_RS12430;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028592.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	pseudogene	12450	13488	.	-	.	ID=gene-STY7866_RS12435;Name=purM;gbkey=Gene;gene=purM;gene_biotype=pseudogene;locus_tag=STY7866_RS12435;pseudo=true
NZ_CAAR01000314.1	Protein Homology	CDS	12450	13488	.	-	0	ID=cds-STY7866_RS12435;Parent=gene-STY7866_RS12435;Note=frameshifted;gbkey=CDS;gene=purM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=STY7866_RS12435;product=phosphoribosylformylglycinamidine cyclo-ligase;pseudo=true;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	13901	14527	.	+	.	ID=gene-STY7866_RS12440;Name=STY7866_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12440
NZ_CAAR01000314.1	Protein Homology	CDS	13901	14527	.	+	0	ID=cds-WP_000706208.1;Parent=gene-STY7866_RS12440;Dbxref=Genbank:WP_000706208.1;Name=WP_000706208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=STY7866_RS12440;product=uracil phosphoribosyltransferase;protein_id=WP_000706208.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	14615	15904	.	+	.	ID=gene-STY7866_RS12445;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=STY7866_RS12445
NZ_CAAR01000314.1	Protein Homology	CDS	14615	15904	.	+	0	ID=cds-WP_000198341.1;Parent=gene-STY7866_RS12445;Dbxref=Genbank:WP_000198341.1;Name=WP_000198341.1;gbkey=CDS;gene=uraA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457032.1;locus_tag=STY7866_RS12445;product=uracil permease;protein_id=WP_000198341.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	15975	16700	.	+	.	ID=gene-STY7866_RS12450;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=STY7866_RS12450
NZ_CAAR01000314.1	Protein Homology	CDS	15975	16700	.	+	0	ID=cds-WP_000100388.1;Parent=gene-STY7866_RS12450;Dbxref=Genbank:WP_000100388.1;Name=WP_000100388.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457031.1;locus_tag=STY7866_RS12450;product=DnaA inactivator Hda;protein_id=WP_000100388.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	16727	17086	.	-	.	ID=gene-STY7866_RS12455;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=STY7866_RS12455
NZ_CAAR01000314.1	Protein Homology	CDS	16727	17086	.	-	0	ID=cds-WP_000132650.1;Parent=gene-STY7866_RS12455;Dbxref=Genbank:WP_000132650.1;Name=WP_000132650.1;gbkey=CDS;gene=arsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311384.1;locus_tag=STY7866_RS12455;product=arsenate reductase (glutaredoxin);protein_id=WP_000132650.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	17126	18589	.	-	.	ID=gene-STY7866_RS12460;Name=STY7866_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12460
NZ_CAAR01000314.1	Protein Homology	CDS	17126	18589	.	-	0	ID=cds-WP_000489630.1;Parent=gene-STY7866_RS12460;Dbxref=Genbank:WP_000489630.1;Name=WP_000489630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457029.1;locus_tag=STY7866_RS12460;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489630.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	18797	19864	.	+	.	ID=gene-STY7866_RS12465;Name=STY7866_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12465
NZ_CAAR01000314.1	Protein Homology	CDS	18797	19864	.	+	0	ID=cds-WP_000892056.1;Parent=gene-STY7866_RS12465;Dbxref=Genbank:WP_000892056.1;Name=WP_000892056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457028.1;locus_tag=STY7866_RS12465;product=AI-2E family transporter;protein_id=WP_000892056.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	pseudogene	20141	21328	.	+	.	ID=gene-STY7866_RS12470;Name=STY7866_RS12470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12470;pseudo=true
NZ_CAAR01000314.1	Protein Homology	CDS	20141	21328	.	+	0	ID=cds-STY7866_RS12470;Parent=gene-STY7866_RS12470;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=STY7866_RS12470;product=XRE family transcriptional regulator;pseudo=true;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	21396	22664	.	+	.	ID=gene-STY7866_RS12475;Name=STY7866_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12475
NZ_CAAR01000314.1	Protein Homology	CDS	21396	22664	.	+	0	ID=cds-WP_000200863.1;Parent=gene-STY7866_RS12475;Dbxref=Genbank:WP_000200863.1;Name=WP_000200863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457027.1;locus_tag=STY7866_RS12475;product=GntP family permease;protein_id=WP_000200863.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	22670	23809	.	+	.	ID=gene-STY7866_RS12480;Name=STY7866_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12480
NZ_CAAR01000314.1	Protein Homology	CDS	22670	23809	.	+	0	ID=cds-WP_000706383.1;Parent=gene-STY7866_RS12480;Dbxref=Genbank:WP_000706383.1;Name=WP_000706383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457026.1;locus_tag=STY7866_RS12480;product=glycerate kinase;protein_id=WP_000706383.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	23856	24326	.	-	.	ID=gene-STY7866_RS12485;Name=STY7866_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12485
NZ_CAAR01000314.1	Protein Homology	CDS	23856	24326	.	-	0	ID=cds-WP_001068686.1;Parent=gene-STY7866_RS12485;Dbxref=Genbank:WP_001068686.1;Name=WP_001068686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457025.1;locus_tag=STY7866_RS12485;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068686.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	24326	24928	.	-	.	ID=gene-STY7866_RS12490;Name=STY7866_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12490
NZ_CAAR01000314.1	Protein Homology	CDS	24326	24928	.	-	0	ID=cds-WP_151260001.1;Parent=gene-STY7866_RS12490;Dbxref=Genbank:WP_151260001.1;Name=WP_151260001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003835092.1;locus_tag=STY7866_RS12490;product=glycine cleavage system transcriptional repressor;protein_id=WP_151260001.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	25046	25924	.	+	.	ID=gene-STY7866_RS12495;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=STY7866_RS12495
NZ_CAAR01000314.1	Protein Homology	CDS	25046	25924	.	+	0	ID=cds-WP_000494019.1;Parent=gene-STY7866_RS12495;Dbxref=Genbank:WP_000494019.1;Name=WP_000494019.1;gbkey=CDS;gene=dapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=STY7866_RS12495;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_000494019.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	gene	25941	26975	.	+	.	ID=gene-STY7866_RS12500;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=STY7866_RS12500
NZ_CAAR01000314.1	Protein Homology	CDS	25941	26975	.	+	0	ID=cds-WP_000331880.1;Parent=gene-STY7866_RS12500;Dbxref=Genbank:WP_000331880.1;Name=WP_000331880.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457022.1;locus_tag=STY7866_RS12500;product=outer membrane protein assembly factor BamC;protein_id=WP_000331880.1;transl_table=11
NZ_CAAR01000314.1	RefSeq	pseudogene	27150	27350	.	+	.	ID=gene-STY7866_RS12505;Name=STY7866_RS12505;end_range=27350,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12505;partial=true;pseudo=true
NZ_CAAR01000314.1	Protein Homology	CDS	27150	27350	.	+	0	ID=cds-STY7866_RS12505;Parent=gene-STY7866_RS12505;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=27350,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=STY7866_RS12505;partial=true;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000313.1 1 2027
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000313.1	RefSeq	region	1	2027	.	+	.	ID=NZ_CAAR01000313.1:1..2027;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000313.1	RefSeq	pseudogene	1	732	.	-	.	ID=gene-STY7866_RS12360;Name=STY7866_RS12360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12360;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000313.1	Protein Homology	CDS	1	732	.	-	0	ID=cds-STY7866_RS12360;Parent=gene-STY7866_RS12360;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455571.1;locus_tag=STY7866_RS12360;partial=true;product=TIGR01666 family membrane protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000313.1	RefSeq	gene	751	1197	.	-	.	ID=gene-STY7866_RS12365;Name=STY7866_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12365
NZ_CAAR01000313.1	Protein Homology	CDS	751	1197	.	-	0	ID=cds-WP_001261222.1;Parent=gene-STY7866_RS12365;Dbxref=Genbank:WP_001261222.1;Name=WP_001261222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455572.1;locus_tag=STY7866_RS12365;product=YccF domain-containing protein;protein_id=WP_001261222.1;transl_table=11
NZ_CAAR01000313.1	RefSeq	pseudogene	1321	2027	.	+	.	ID=gene-STY7866_RS12370;Name=helD;end_range=2027,.;gbkey=Gene;gene=helD;gene_biotype=pseudogene;locus_tag=STY7866_RS12370;partial=true;pseudo=true
NZ_CAAR01000313.1	Protein Homology	CDS	1321	2027	.	+	0	ID=cds-STY7866_RS12370;Parent=gene-STY7866_RS12370;Note=catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2027,.;gbkey=CDS;gene=helD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455573.1;locus_tag=STY7866_RS12370;partial=true;product=DNA helicase IV;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000312.1 1 9568
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000312.1	RefSeq	region	1	9568	.	+	.	ID=NZ_CAAR01000312.1:1..9568;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000312.1	RefSeq	gene	1	602	.	+	.	ID=gene-STY7866_RS12310;Name=STY7866_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12310;partial=true;start_range=.,1
NZ_CAAR01000312.1	Protein Homology	CDS	1	602	.	+	2	ID=cds-WP_000352206.1;Parent=gene-STY7866_RS12310;Dbxref=Genbank:WP_000352206.1;Name=WP_000352206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001772497.1;locus_tag=STY7866_RS12310;partial=true;product=polysaccharide pyruvyl transferase family protein;protein_id=WP_000352206.1;start_range=.,1;transl_table=11
NZ_CAAR01000312.1	RefSeq	gene	662	1741	.	+	.	ID=gene-STY7866_RS12315;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=STY7866_RS12315
NZ_CAAR01000312.1	Protein Homology	CDS	662	1741	.	+	0	ID=cds-WP_000704702.1;Parent=gene-STY7866_RS12315;Dbxref=Genbank:WP_000704702.1;Name=WP_000704702.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458208.1;locus_tag=STY7866_RS12315;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WP_000704702.1;transl_table=11
NZ_CAAR01000312.1	RefSeq	gene	1747	2760	.	+	.	ID=gene-STY7866_RS12320;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=STY7866_RS12320
NZ_CAAR01000312.1	Protein Homology	CDS	1747	2760	.	+	0	ID=cds-WP_000088491.1;Parent=gene-STY7866_RS12320;Dbxref=Genbank:WP_000088491.1;Name=WP_000088491.1;gbkey=CDS;gene=waaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458209.1;locus_tag=STY7866_RS12320;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_000088491.1;transl_table=11
NZ_CAAR01000312.1	RefSeq	gene	2778	3788	.	+	.	ID=gene-STY7866_RS12325;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=STY7866_RS12325
NZ_CAAR01000312.1	Protein Homology	CDS	2778	3788	.	+	0	ID=cds-WP_000376863.1;Parent=gene-STY7866_RS12325;Dbxref=Genbank:WP_000376863.1;Name=WP_000376863.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458210.1;locus_tag=STY7866_RS12325;product=lipopolysaccharide glucosyltransferase RfaJ;protein_id=WP_000376863.1;transl_table=11
NZ_CAAR01000312.1	RefSeq	gene	3811	4509	.	+	.	ID=gene-STY7866_RS12330;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=STY7866_RS12330
NZ_CAAR01000312.1	Protein Homology	CDS	3811	4509	.	+	0	ID=cds-WP_000582822.1;Parent=gene-STY7866_RS12330;Dbxref=Genbank:WP_000582822.1;Name=WP_000582822.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458211.1;locus_tag=STY7866_RS12330;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000582822.1;transl_table=11
NZ_CAAR01000312.1	RefSeq	gene	4659	5468	.	+	.	ID=gene-STY7866_RS12335;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=STY7866_RS12335
NZ_CAAR01000312.1	Protein Homology	CDS	4659	5468	.	+	0	ID=cds-WP_000536021.1;Parent=gene-STY7866_RS12335;Dbxref=Genbank:WP_000536021.1;Name=WP_000536021.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458212.1;locus_tag=STY7866_RS12335;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=WP_000536021.1;transl_table=11
NZ_CAAR01000312.1	RefSeq	gene	5567	6712	.	+	.	ID=gene-STY7866_RS12340;Name=STY7866_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12340
NZ_CAAR01000312.1	Protein Homology	CDS	5567	6712	.	+	0	ID=cds-WP_000591814.1;Parent=gene-STY7866_RS12340;Dbxref=Genbank:WP_000591814.1;Name=WP_000591814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458213.1;locus_tag=STY7866_RS12340;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_000591814.1;transl_table=11
NZ_CAAR01000312.1	RefSeq	gene	6769	7983	.	-	.	ID=gene-STY7866_RS12345;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=STY7866_RS12345
NZ_CAAR01000312.1	Protein Homology	CDS	6769	7983	.	-	0	ID=cds-WP_000958453.1;Parent=gene-STY7866_RS12345;Dbxref=Genbank:WP_000958453.1;Name=WP_000958453.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458214.1;locus_tag=STY7866_RS12345;product=O-antigen ligase RfaL;protein_id=WP_000958453.1;transl_table=11
NZ_CAAR01000312.1	RefSeq	gene	8023	8976	.	-	.	ID=gene-STY7866_RS12350;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=STY7866_RS12350
NZ_CAAR01000312.1	Protein Homology	CDS	8023	8976	.	-	0	ID=cds-WP_001264610.1;Parent=gene-STY7866_RS12350;Dbxref=Genbank:WP_001264610.1;Name=WP_001264610.1;gbkey=CDS;gene=rfaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458215.1;locus_tag=STY7866_RS12350;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264610.1;transl_table=11
NZ_CAAR01000312.1	RefSeq	gene	8976	9568	.	-	.	ID=gene-STY7866_RS12355;Name=waaF;end_range=9568,.;gbkey=Gene;gene=waaF;gene_biotype=protein_coding;locus_tag=STY7866_RS12355;partial=true
NZ_CAAR01000312.1	Protein Homology	CDS	8976	9568	.	-	2	ID=cds-WP_000303048.1;Parent=gene-STY7866_RS12355;Dbxref=Genbank:WP_000303048.1;Name=WP_000303048.1;end_range=9568,.;gbkey=CDS;gene=waaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458216.1;locus_tag=STY7866_RS12355;partial=true;product=lipopolysaccharide heptosyltransferase II;protein_id=WP_000303048.1;transl_table=11
##sequence-region NZ_CAAR01000311.1 1 2857
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000311.1	RefSeq	region	1	2857	.	+	.	ID=NZ_CAAR01000311.1:1..2857;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000311.1	RefSeq	gene	1	1348	.	+	.	ID=gene-STY7866_RS12290;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=STY7866_RS12290;partial=true;start_range=.,1
NZ_CAAR01000311.1	Protein Homology	CDS	1	1348	.	+	1	ID=cds-WP_000464070.1;Parent=gene-STY7866_RS12290;Dbxref=Genbank:WP_000464070.1;Name=WP_000464070.1;gbkey=CDS;gene=helD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455573.1;locus_tag=STY7866_RS12290;partial=true;product=DNA helicase IV;protein_id=WP_000464070.1;start_range=.,1;transl_table=11
NZ_CAAR01000311.1	RefSeq	gene	1384	1842	.	-	.	ID=gene-STY7866_RS12295;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=STY7866_RS12295
NZ_CAAR01000311.1	Protein Homology	CDS	1384	1842	.	-	0	ID=cds-WP_000424187.1;Parent=gene-STY7866_RS12295;Dbxref=Genbank:WP_000424187.1;Name=WP_000424187.1;gbkey=CDS;gene=mgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455574.1;locus_tag=STY7866_RS12295;product=methylglyoxal synthase;protein_id=WP_000424187.1;transl_table=11
NZ_CAAR01000311.1	RefSeq	gene	1938	2600	.	-	.	ID=gene-STY7866_RS12300;Name=STY7866_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12300
NZ_CAAR01000311.1	Protein Homology	CDS	1938	2600	.	-	0	ID=cds-WP_000847719.1;Parent=gene-STY7866_RS12300;Dbxref=Genbank:WP_000847719.1;Name=WP_000847719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455575.1;locus_tag=STY7866_RS12300;product=DUF2057 family protein;protein_id=WP_000847719.1;transl_table=11
NZ_CAAR01000311.1	RefSeq	pseudogene	2771	2857	.	+	.	ID=gene-STY7866_RS12305;Name=STY7866_RS12305;end_range=2857,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12305;partial=true;pseudo=true
NZ_CAAR01000311.1	Protein Homology	CDS	2771	2857	.	+	0	ID=cds-STY7866_RS12305;Parent=gene-STY7866_RS12305;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2857,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455576.1;locus_tag=STY7866_RS12305;partial=true;product=CoA-binding protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000310.1 1 7989
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000310.1	RefSeq	region	1	7989	.	+	.	ID=NZ_CAAR01000310.1:1..7989;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000310.1	RefSeq	gene	32	880	.	-	.	ID=gene-STY7866_RS12250;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=STY7866_RS12250
NZ_CAAR01000310.1	Protein Homology	CDS	32	880	.	-	0	ID=cds-WP_000013291.1;Parent=gene-STY7866_RS12250;Dbxref=Genbank:WP_000013291.1;Name=WP_000013291.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458001.1;locus_tag=STY7866_RS12250;product=HTH-type transcriptional activator RhaR;protein_id=WP_000013291.1;transl_table=11
NZ_CAAR01000310.1	RefSeq	gene	1033	1869	.	-	.	ID=gene-STY7866_RS12255;Name=STY7866_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12255
NZ_CAAR01000310.1	Protein Homology	CDS	1033	1869	.	-	0	ID=cds-WP_000217112.1;Parent=gene-STY7866_RS12255;Dbxref=Genbank:WP_000217112.1;Name=WP_000217112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458002.1;locus_tag=STY7866_RS12255;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217112.1;transl_table=11
NZ_CAAR01000310.1	RefSeq	pseudogene	2157	3627	.	+	.	ID=gene-STY7866_RS12260;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=pseudogene;locus_tag=STY7866_RS12260;pseudo=true
NZ_CAAR01000310.1	Protein Homology	CDS	2157	3627	.	+	0	ID=cds-STY7866_RS12260;Parent=gene-STY7866_RS12260;Note=frameshifted;gbkey=CDS;gene=rhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458003.1;locus_tag=STY7866_RS12260;product=rhamnulokinase;pseudo=true;transl_table=11
NZ_CAAR01000310.1	RefSeq	gene	3624	4883	.	+	.	ID=gene-STY7866_RS12265;Name=STY7866_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12265
NZ_CAAR01000310.1	Protein Homology	CDS	3624	4883	.	+	0	ID=cds-WP_000211475.1;Parent=gene-STY7866_RS12265;Dbxref=Genbank:WP_000211475.1;Name=WP_000211475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458004.1;locus_tag=STY7866_RS12265;product=L-rhamnose isomerase;protein_id=WP_000211475.1;transl_table=11
NZ_CAAR01000310.1	RefSeq	pseudogene	4941	5767	.	+	.	ID=gene-STY7866_RS12270;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=pseudogene;locus_tag=STY7866_RS12270;pseudo=true
NZ_CAAR01000310.1	Protein Homology	CDS	4941	5767	.	+	0	ID=cds-STY7866_RS12270;Parent=gene-STY7866_RS12270;Note=frameshifted;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=STY7866_RS12270;product=rhamnulose-1-phosphate aldolase;pseudo=true;transl_table=11
NZ_CAAR01000310.1	RefSeq	gene	5894	7042	.	+	.	ID=gene-STY7866_RS12275;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=STY7866_RS12275
NZ_CAAR01000310.1	Protein Homology	CDS	5894	7042	.	+	0	ID=cds-WP_000009255.1;Parent=gene-STY7866_RS12275;Dbxref=Genbank:WP_000009255.1;Name=WP_000009255.1;gbkey=CDS;gene=fucO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458005.1;locus_tag=STY7866_RS12275;product=lactaldehyde reductase;protein_id=WP_000009255.1;transl_table=11
NZ_CAAR01000310.1	RefSeq	gene	7039	7353	.	+	.	ID=gene-STY7866_RS12280;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=STY7866_RS12280
NZ_CAAR01000310.1	Protein Homology	CDS	7039	7353	.	+	0	ID=cds-WP_000619478.1;Parent=gene-STY7866_RS12280;Dbxref=Genbank:WP_000619478.1;Name=WP_000619478.1;gbkey=CDS;gene=rhaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458006.1;locus_tag=STY7866_RS12280;product=L-rhamnose mutarotase;protein_id=WP_000619478.1;transl_table=11
NZ_CAAR01000310.1	RefSeq	gene	7442	7989	.	-	.	ID=gene-STY7866_RS12285;Name=STY7866_RS12285;end_range=7989,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12285;partial=true
NZ_CAAR01000310.1	Protein Homology	CDS	7442	7989	.	-	2	ID=cds-WP_000318717.1;Parent=gene-STY7866_RS12285;Dbxref=Genbank:WP_000318717.1;Name=WP_000318717.1;end_range=7989,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458007.1;locus_tag=STY7866_RS12285;partial=true;product=helix-turn-helix transcriptional regulator;protein_id=WP_000318717.1;transl_table=11
##sequence-region NZ_CAAR01000309.1 1 5455
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000309.1	RefSeq	region	1	5455	.	+	.	ID=NZ_CAAR01000309.1:1..5455;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000309.1	RefSeq	gene	1	716	.	-	.	ID=gene-STY7866_RS12220;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=STY7866_RS12220;partial=true;start_range=.,1
NZ_CAAR01000309.1	Protein Homology	CDS	1	716	.	-	0	ID=cds-WP_000192018.1;Parent=gene-STY7866_RS12220;Dbxref=Genbank:WP_000192018.1;Name=WP_000192018.1;gbkey=CDS;gene=bcsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458296.1;locus_tag=STY7866_RS12220;partial=true;product=cellulose biosynthesis protein BcsG;protein_id=WP_000192018.1;start_range=.,1;transl_table=11
NZ_CAAR01000309.1	RefSeq	gene	713	904	.	-	.	ID=gene-STY7866_RS12225;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=STY7866_RS12225
NZ_CAAR01000309.1	Protein Homology	CDS	713	904	.	-	0	ID=cds-WP_000988321.1;Parent=gene-STY7866_RS12225;Dbxref=Genbank:WP_000988321.1;Name=WP_000988321.1;gbkey=CDS;gene=bcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458297.1;locus_tag=STY7866_RS12225;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988321.1;transl_table=11
NZ_CAAR01000309.1	RefSeq	gene	901	2472	.	-	.	ID=gene-STY7866_RS12230;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=STY7866_RS12230
NZ_CAAR01000309.1	Protein Homology	CDS	901	2472	.	-	0	ID=cds-WP_001205773.1;Parent=gene-STY7866_RS12230;Dbxref=Genbank:WP_001205773.1;Name=WP_001205773.1;gbkey=CDS;gene=bcsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458298.1;locus_tag=STY7866_RS12230;product=cellulose biosynthesis protein BcsE;protein_id=WP_001205773.1;transl_table=11
NZ_CAAR01000309.1	RefSeq	gene	2717	2920	.	+	.	ID=gene-STY7866_RS12235;Name=STY7866_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12235
NZ_CAAR01000309.1	Protein Homology	CDS	2717	2920	.	+	0	ID=cds-WP_000282616.1;Parent=gene-STY7866_RS12235;Dbxref=Genbank:WP_000282616.1;Name=WP_000282616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458299.1;locus_tag=STY7866_RS12235;product=hypothetical protein;protein_id=WP_000282616.1;transl_table=11
NZ_CAAR01000309.1	RefSeq	gene	2921	3673	.	+	.	ID=gene-STY7866_RS12240;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=STY7866_RS12240
NZ_CAAR01000309.1	Protein Homology	CDS	2921	3673	.	+	0	ID=cds-WP_000996130.1;Parent=gene-STY7866_RS12240;Dbxref=Genbank:WP_000996130.1;Name=WP_000996130.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458300.1;locus_tag=STY7866_RS12240;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000996130.1;transl_table=11
NZ_CAAR01000309.1	RefSeq	gene	3670	5455	.	+	.	ID=gene-STY7866_RS12245;Name=bcsA;end_range=5455,.;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=STY7866_RS12245;partial=true
NZ_CAAR01000309.1	Protein Homology	CDS	3670	5455	.	+	0	ID=cds-WP_001275343.1;Parent=gene-STY7866_RS12245;Dbxref=Genbank:WP_001275343.1;Name=WP_001275343.1;end_range=5455,.;gbkey=CDS;gene=bcsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458301.1;locus_tag=STY7866_RS12245;partial=true;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_001275343.1;transl_table=11
##sequence-region NZ_CAAR01000308.1 1 8063
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000308.1	RefSeq	region	1	8063	.	+	.	ID=NZ_CAAR01000308.1:1..8063;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000308.1	RefSeq	gene	1	557	.	-	.	ID=gene-STY7866_RS12175;Name=STY7866_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12175;partial=true;start_range=.,1
NZ_CAAR01000308.1	Protein Homology	CDS	1	557	.	-	0	ID=cds-WP_001764177.1;Parent=gene-STY7866_RS12175;Dbxref=Genbank:WP_001764177.1;Name=WP_001764177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455210.1;locus_tag=STY7866_RS12175;partial=true;product=DNA-binding transcriptional regulator;protein_id=WP_001764177.1;start_range=.,1;transl_table=11
NZ_CAAR01000308.1	RefSeq	gene	859	1500	.	-	.	ID=gene-STY7866_RS12180;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=STY7866_RS12180
NZ_CAAR01000308.1	Protein Homology	CDS	859	1500	.	-	0	ID=cds-WP_000284017.1;Parent=gene-STY7866_RS12180;Dbxref=Genbank:WP_000284017.1;Name=WP_000284017.1;gbkey=CDS;gene=lipB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000284017.1;locus_tag=STY7866_RS12180;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284017.1;transl_table=11
NZ_CAAR01000308.1	RefSeq	gene	1600	1863	.	-	.	ID=gene-STY7866_RS12185;Name=STY7866_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12185
NZ_CAAR01000308.1	Protein Homology	CDS	1600	1863	.	-	0	ID=cds-WP_000850547.1;Parent=gene-STY7866_RS12185;Dbxref=Genbank:WP_000850547.1;Name=WP_000850547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455212.1;locus_tag=STY7866_RS12185;product=YbeD family protein;protein_id=WP_000850547.1;transl_table=11
NZ_CAAR01000308.1	RefSeq	pseudogene	1971	3183	.	-	.	ID=gene-STY7866_RS12190;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=pseudogene;locus_tag=STY7866_RS12190;pseudo=true
NZ_CAAR01000308.1	Protein Homology	CDS	1971	3183	.	-	0	ID=cds-STY7866_RS12190;Parent=gene-STY7866_RS12190;Note=frameshifted;gbkey=CDS;gene=dacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455213.1;locus_tag=STY7866_RS12190;product=D-alanyl-D-alanine carboxypeptidase DacA;pseudo=true;transl_table=11
NZ_CAAR01000308.1	RefSeq	gene	3322	4455	.	-	.	ID=gene-STY7866_RS12195;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=STY7866_RS12195
NZ_CAAR01000308.1	Protein Homology	CDS	3322	4455	.	-	0	ID=cds-WP_000549517.1;Parent=gene-STY7866_RS12195;Dbxref=Genbank:WP_000549517.1;Name=WP_000549517.1;gbkey=CDS;gene=rlpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455214.1;locus_tag=STY7866_RS12195;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_000549517.1;transl_table=11
NZ_CAAR01000308.1	RefSeq	pseudogene	4466	5577	.	-	.	ID=gene-STY7866_RS12200;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=pseudogene;gene_synonym=rodA;locus_tag=STY7866_RS12200;pseudo=true
NZ_CAAR01000308.1	Protein Homology	CDS	4466	5577	.	-	0	ID=cds-STY7866_RS12200;Parent=gene-STY7866_RS12200;Note=rod shape-determining protein RodA%3B frameshifted;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=STY7866_RS12200;product=peptidoglycan glycosyltransferase MrdB;pseudo=true;transl_table=11
NZ_CAAR01000308.1	RefSeq	gene	5580	7481	.	-	.	ID=gene-STY7866_RS12205;Name=STY7866_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12205
NZ_CAAR01000308.1	Protein Homology	CDS	5580	7481	.	-	0	ID=cds-WP_000828701.1;Parent=gene-STY7866_RS12205;Dbxref=Genbank:WP_000828701.1;Name=WP_000828701.1;Note=penicillin-binding protein 2;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455216.1;locus_tag=STY7866_RS12205;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000828701.1;transl_table=11
NZ_CAAR01000308.1	RefSeq	gene	7512	7979	.	-	.	ID=gene-STY7866_RS12210;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=STY7866_RS12210
NZ_CAAR01000308.1	Protein Homology	CDS	7512	7979	.	-	0	ID=cds-WP_000776107.1;Parent=gene-STY7866_RS12210;Dbxref=Genbank:WP_000776107.1;Name=WP_000776107.1;gbkey=CDS;gene=rlmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010618862.1;locus_tag=STY7866_RS12210;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776107.1;transl_table=11
NZ_CAAR01000308.1	RefSeq	pseudogene	7983	8063	.	-	.	ID=gene-STY7866_RS12215;Name=STY7866_RS12215;end_range=8063,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12215;partial=true;pseudo=true
NZ_CAAR01000308.1	Protein Homology	CDS	7983	8063	.	-	0	ID=cds-STY7866_RS12215;Parent=gene-STY7866_RS12215;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=8063,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=STY7866_RS12215;partial=true;product=ribosome silencing factor RsfS;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000307.1 1 305
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000307.1	RefSeq	region	1	305	.	+	.	ID=NZ_CAAR01000307.1:1..305;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000307.1	RefSeq	pseudogene	1	305	.	+	.	ID=gene-STY7866_RS12170;Name=STY7866_RS12170;end_range=305,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12170;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000307.1	Protein Homology	CDS	1	305	.	+	1	ID=cds-STY7866_RS12170;Parent=gene-STY7866_RS12170;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=305,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457410.1;locus_tag=STY7866_RS12170;partial=true;product=aspartate/glutamate racemase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000306.1 1 21058
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000306.1	RefSeq	region	1	21058	.	+	.	ID=NZ_CAAR01000306.1:1..21058;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000306.1	RefSeq	gene	1	1049	.	-	.	ID=gene-STY7866_RS12075;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=STY7866_RS12075;partial=true;start_range=.,1
NZ_CAAR01000306.1	Protein Homology	CDS	1	1049	.	-	0	ID=cds-WP_001764172.1;Parent=gene-STY7866_RS12075;Dbxref=Genbank:WP_001764172.1;Name=WP_001764172.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455117.1;locus_tag=STY7866_RS12075;partial=true;product=glycerate 3-kinase;protein_id=WP_001764172.1;start_range=.,1;transl_table=11
NZ_CAAR01000306.1	RefSeq	pseudogene	1072	2369	.	-	.	ID=gene-STY7866_RS12080;Name=STY7866_RS12080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12080;pseudo=true
NZ_CAAR01000306.1	Protein Homology	CDS	1072	2369	.	-	0	ID=cds-STY7866_RS12080;Parent=gene-STY7866_RS12080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455116.1;locus_tag=STY7866_RS12080;product=uracil/xanthine transporter;pseudo=true;transl_table=11
NZ_CAAR01000306.1	RefSeq	gene	2428	3789	.	-	.	ID=gene-STY7866_RS12085;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=STY7866_RS12085
NZ_CAAR01000306.1	Protein Homology	CDS	2428	3789	.	-	0	ID=cds-WP_000006865.1;Parent=gene-STY7866_RS12085;Dbxref=Genbank:WP_000006865.1;Name=WP_000006865.1;gbkey=CDS;gene=allB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455115.1;locus_tag=STY7866_RS12085;product=allantoinase AllB;protein_id=WP_000006865.1;transl_table=11
NZ_CAAR01000306.1	RefSeq	pseudogene	3868	5322	.	-	.	ID=gene-STY7866_RS12090;Name=STY7866_RS12090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12090;pseudo=true
NZ_CAAR01000306.1	Protein Homology	CDS	3868	5322	.	-	0	ID=cds-STY7866_RS12090;Parent=gene-STY7866_RS12090;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=STY7866_RS12090;product=putative allantoin permease;pseudo=true;transl_table=11
NZ_CAAR01000306.1	RefSeq	gene	5418	6665	.	-	.	ID=gene-STY7866_RS12095;Name=STY7866_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12095
NZ_CAAR01000306.1	Protein Homology	CDS	5418	6665	.	-	0	ID=cds-WP_000005062.1;Parent=gene-STY7866_RS12095;Dbxref=Genbank:WP_000005062.1;Name=WP_000005062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455114.1;locus_tag=STY7866_RS12095;product=MFS transporter;protein_id=WP_000005062.1;transl_table=11
NZ_CAAR01000306.1	RefSeq	gene	6731	7609	.	-	.	ID=gene-STY7866_RS12100;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=STY7866_RS12100
NZ_CAAR01000306.1	Protein Homology	CDS	6731	7609	.	-	0	ID=cds-WP_000765818.1;Parent=gene-STY7866_RS12100;Dbxref=Genbank:WP_000765818.1;Name=WP_000765818.1;gbkey=CDS;gene=glxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455113.1;locus_tag=STY7866_RS12100;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765818.1;transl_table=11
NZ_CAAR01000306.1	RefSeq	gene	7710	8486	.	-	.	ID=gene-STY7866_RS12105;Name=STY7866_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12105
NZ_CAAR01000306.1	Protein Homology	CDS	7710	8486	.	-	0	ID=cds-WP_000943597.1;Parent=gene-STY7866_RS12105;Dbxref=Genbank:WP_000943597.1;Name=WP_000943597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455112.1;locus_tag=STY7866_RS12105;product=hydroxypyruvate isomerase;protein_id=WP_000943597.1;transl_table=11
NZ_CAAR01000306.1	RefSeq	gene	8499	10280	.	-	.	ID=gene-STY7866_RS12110;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=STY7866_RS12110
NZ_CAAR01000306.1	Protein Homology	CDS	8499	10280	.	-	0	ID=cds-WP_001096863.1;Parent=gene-STY7866_RS12110;Dbxref=Genbank:WP_001096863.1;Name=WP_001096863.1;gbkey=CDS;gene=gcl;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455111.1;locus_tag=STY7866_RS12110;product=glyoxylate carboligase;protein_id=WP_001096863.1;transl_table=11
NZ_CAAR01000306.1	RefSeq	gene	10365	11183	.	-	.	ID=gene-STY7866_RS12115;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=STY7866_RS12115
NZ_CAAR01000306.1	Protein Homology	CDS	10365	11183	.	-	0	ID=cds-WP_000141266.1;Parent=gene-STY7866_RS12115;Dbxref=Genbank:WP_000141266.1;Name=WP_000141266.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455110.1;locus_tag=STY7866_RS12115;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141266.1;transl_table=11
NZ_CAAR01000306.1	RefSeq	pseudogene	11262	11743	.	-	.	ID=gene-STY7866_RS12120;Name=allA;gbkey=Gene;gene=allA;gene_biotype=pseudogene;locus_tag=STY7866_RS12120;pseudo=true
NZ_CAAR01000306.1	Protein Homology	CDS	11262	11743	.	-	0	ID=cds-STY7866_RS12120;Parent=gene-STY7866_RS12120;Note=frameshifted;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459510.1;locus_tag=STY7866_RS12120;product=ureidoglycolate lyase;pseudo=true;transl_table=11
NZ_CAAR01000306.1	RefSeq	pseudogene	11970	12866	.	+	.	ID=gene-STY7866_RS12125;Name=allS;end_range=12866,.;gbkey=Gene;gene=allS;gene_biotype=pseudogene;locus_tag=STY7866_RS12125;partial=true;pseudo=true
NZ_CAAR01000306.1	Protein Homology	CDS	11970	12866	.	+	0	ID=cds-STY7866_RS12125;Parent=gene-STY7866_RS12125;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=12866,.;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308592.1;locus_tag=STY7866_RS12125;partial=true;product=HTH-type transcriptional activator AllS;pseudo=true;transl_table=11
NZ_CAAR01000306.1	RefSeq	gene	12967	14061	.	+	.	ID=gene-STY7866_RS12130;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=STY7866_RS12130
NZ_CAAR01000306.1	Protein Homology	CDS	12967	14061	.	+	0	ID=cds-WP_001154074.1;Parent=gene-STY7866_RS12130;Dbxref=Genbank:WP_001154074.1;Name=WP_001154074.1;gbkey=CDS;gene=mnmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455108.1;locus_tag=STY7866_RS12130;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_001154074.1;transl_table=11
NZ_CAAR01000306.1	RefSeq	gene	14100	14759	.	-	.	ID=gene-STY7866_RS12135;Name=STY7866_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12135
NZ_CAAR01000306.1	Protein Homology	CDS	14100	14759	.	-	0	ID=cds-WP_000342247.1;Parent=gene-STY7866_RS12135;Dbxref=Genbank:WP_000342247.1;Name=WP_000342247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455107.1;locus_tag=STY7866_RS12135;product=ABC transporter permease;protein_id=WP_000342247.1;transl_table=11
NZ_CAAR01000306.1	RefSeq	gene	14752	15768	.	-	.	ID=gene-STY7866_RS12140;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=STY7866_RS12140
NZ_CAAR01000306.1	Protein Homology	CDS	14752	15768	.	-	0	ID=cds-WP_000569655.1;Parent=gene-STY7866_RS12140;Dbxref=Genbank:WP_000569655.1;Name=WP_000569655.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455106.1;locus_tag=STY7866_RS12140;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WP_000569655.1;transl_table=11
NZ_CAAR01000306.1	RefSeq	pseudogene	15805	16634	.	-	.	ID=gene-STY7866_RS12145;Name=STY7866_RS12145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12145;pseudo=true
NZ_CAAR01000306.1	Protein Homology	CDS	15805	16634	.	-	0	ID=cds-STY7866_RS12145;Parent=gene-STY7866_RS12145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455105.1;locus_tag=STY7866_RS12145;product=metal ABC transporter substrate-binding protein;pseudo=true;transl_table=11
NZ_CAAR01000306.1	RefSeq	gene	16891	18024	.	-	.	ID=gene-STY7866_RS12150;Name=STY7866_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12150
NZ_CAAR01000306.1	Protein Homology	CDS	16891	18024	.	-	0	ID=cds-WP_000152873.1;Parent=gene-STY7866_RS12150;Dbxref=Genbank:WP_000152873.1;Name=WP_000152873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455104.1;locus_tag=STY7866_RS12150;product=porin;protein_id=WP_000152873.1;transl_table=11
NZ_CAAR01000306.1	RefSeq	gene	18210	20624	.	-	.	ID=gene-STY7866_RS12160;Name=STY7866_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12160
NZ_CAAR01000306.1	Protein Homology	CDS	18210	20624	.	-	0	ID=cds-WP_000561782.1;Parent=gene-STY7866_RS12160;Dbxref=Genbank:WP_000561782.1;Name=WP_000561782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455103.1;locus_tag=STY7866_RS12160;product=ABC transporter permease;protein_id=WP_000561782.1;transl_table=11
NZ_CAAR01000306.1	RefSeq	gene	20621	21058	.	-	.	ID=gene-STY7866_RS12165;Name=STY7866_RS12165;end_range=21058,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12165;partial=true
NZ_CAAR01000306.1	Protein Homology	CDS	20621	21058	.	-	0	ID=cds-WP_000302637.1;Parent=gene-STY7866_RS12165;Dbxref=Genbank:WP_000302637.1;Name=WP_000302637.1;end_range=21058,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455102.1;locus_tag=STY7866_RS12165;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_000302637.1;transl_table=11
##sequence-region NZ_CAAR01000305.1 1 4692
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000305.1	RefSeq	region	1	4692	.	+	.	ID=NZ_CAAR01000305.1:1..4692;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000305.1	RefSeq	gene	1	1807	.	+	.	ID=gene-STY7866_RS12060;Name=STY7866_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12060;partial=true;start_range=.,1
NZ_CAAR01000305.1	Protein Homology	CDS	1	1807	.	+	1	ID=cds-WP_000641567.1;Parent=gene-STY7866_RS12060;Dbxref=Genbank:WP_000641567.1;Name=WP_000641567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457745.1;locus_tag=STY7866_RS12060;partial=true;product=TIGR02099 family protein;protein_id=WP_000641567.1;start_range=.,1;transl_table=11
NZ_CAAR01000305.1	RefSeq	gene	1952	3397	.	+	.	ID=gene-STY7866_RS12065;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=STY7866_RS12065
NZ_CAAR01000305.1	Protein Homology	CDS	1952	3397	.	+	0	ID=cds-WP_000055936.1;Parent=gene-STY7866_RS12065;Dbxref=Genbank:WP_000055936.1;Name=WP_000055936.1;gbkey=CDS;gene=tldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457744.1;locus_tag=STY7866_RS12065;product=metalloprotease TldD;protein_id=WP_000055936.1;transl_table=11
NZ_CAAR01000305.1	RefSeq	gene	3519	4448	.	-	.	ID=gene-STY7866_RS12070;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=STY7866_RS12070
NZ_CAAR01000305.1	Protein Homology	CDS	3519	4448	.	-	0	ID=cds-WP_000440300.1;Parent=gene-STY7866_RS12070;Dbxref=Genbank:WP_000440300.1;Name=WP_000440300.1;gbkey=CDS;gene=aaeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457743.1;locus_tag=STY7866_RS12070;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440300.1;transl_table=11
##sequence-region NZ_CAAR01000304.1 1 7577
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000304.1	RefSeq	region	1	7577	.	+	.	ID=NZ_CAAR01000304.1:1..7577;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000304.1	RefSeq	gene	18	434	.	+	.	ID=gene-STY7866_RS12005;Name=STY7866_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12005
NZ_CAAR01000304.1	Protein Homology	CDS	18	434	.	+	0	ID=cds-WP_000287291.1;Parent=gene-STY7866_RS12005;Dbxref=Genbank:WP_000287291.1;Name=WP_000287291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456697.1;locus_tag=STY7866_RS12005;product=CesT family type III secretion system chaperone;protein_id=WP_000287291.1;transl_table=11
NZ_CAAR01000304.1	RefSeq	gene	393	623	.	-	.	ID=gene-STY7866_RS27255;Name=STY7866_RS27255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27255
NZ_CAAR01000304.1	Protein Homology	CDS	393	623	.	-	0	ID=cds-WP_077905067.1;Parent=gene-STY7866_RS27255;Dbxref=Genbank:WP_077905067.1;Name=WP_077905067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001612046.1;locus_tag=STY7866_RS27255;product=hypothetical protein;protein_id=WP_077905067.1;transl_table=11
NZ_CAAR01000304.1	RefSeq	gene	1074	2435	.	-	.	ID=gene-STY7866_RS12010;Name=STY7866_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12010
NZ_CAAR01000304.1	Protein Homology	CDS	1074	2435	.	-	0	ID=cds-WP_001517981.1;Parent=gene-STY7866_RS12010;Dbxref=Genbank:WP_001517981.1;Name=WP_001517981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456696.1;locus_tag=STY7866_RS12010;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_001517981.1;transl_table=11
NZ_CAAR01000304.1	RefSeq	gene	2599	3216	.	+	.	ID=gene-STY7866_RS12015;Name=STY7866_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12015
NZ_CAAR01000304.1	Protein Homology	CDS	2599	3216	.	+	0	ID=cds-WP_000977162.1;Parent=gene-STY7866_RS12015;Dbxref=Genbank:WP_000977162.1;Name=WP_000977162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456695.1;locus_tag=STY7866_RS12015;product=hypothetical protein;protein_id=WP_000977162.1;transl_table=11
NZ_CAAR01000304.1	RefSeq	gene	3241	3438	.	+	.	ID=gene-STY7866_RS12020;Name=STY7866_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12020
NZ_CAAR01000304.1	Protein Homology	CDS	3241	3438	.	+	0	ID=cds-WP_000742015.1;Parent=gene-STY7866_RS12020;Dbxref=Genbank:WP_000742015.1;Name=WP_000742015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000742015.1;locus_tag=STY7866_RS12020;product=hypothetical protein;protein_id=WP_000742015.1;transl_table=11
NZ_CAAR01000304.1	RefSeq	gene	3873	4292	.	+	.	ID=gene-STY7866_RS12030;Name=STY7866_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12030
NZ_CAAR01000304.1	Protein Homology	CDS	3873	4292	.	+	0	ID=cds-WP_000502176.1;Parent=gene-STY7866_RS12030;Dbxref=Genbank:WP_000502176.1;Name=WP_000502176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502176.1;locus_tag=STY7866_RS12030;product=hypothetical protein;protein_id=WP_000502176.1;transl_table=11
NZ_CAAR01000304.1	RefSeq	pseudogene	4728	5089	.	+	.	ID=gene-STY7866_RS27260;Name=STY7866_RS27260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27260;pseudo=true
NZ_CAAR01000304.1	Protein Homology	CDS	4728	5089	.	+	0	ID=cds-STY7866_RS27260;Parent=gene-STY7866_RS27260;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747579.1;locus_tag=STY7866_RS27260;product=DUF4329 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000304.1	RefSeq	pseudogene	5099	5405	.	+	.	ID=gene-STY7866_RS12035;Name=STY7866_RS12035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12035;pseudo=true
NZ_CAAR01000304.1	Protein Homology	CDS	5099	5405	.	+	0	ID=cds-STY7866_RS12035;Parent=gene-STY7866_RS12035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000873939.1;locus_tag=STY7866_RS12035;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000304.1	RefSeq	gene	5536	6036	.	+	.	ID=gene-STY7866_RS12040;Name=STY7866_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12040
NZ_CAAR01000304.1	Protein Homology	CDS	5536	6036	.	+	0	ID=cds-WP_000142760.1;Parent=gene-STY7866_RS12040;Dbxref=Genbank:WP_000142760.1;Name=WP_000142760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456690.1;locus_tag=STY7866_RS12040;product=CdiI family contact-dependent growth inhibition immunity protein;protein_id=WP_000142760.1;transl_table=11
NZ_CAAR01000304.1	RefSeq	pseudogene	6110	6637	.	+	.	ID=gene-STY7866_RS12045;Name=STY7866_RS12045;end_range=6637,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS12045;partial=true;pseudo=true
NZ_CAAR01000304.1	Protein Homology	CDS	6110	6637	.	+	0	ID=cds-STY7866_RS12045;Parent=gene-STY7866_RS12045;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=6637,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505242.1;locus_tag=STY7866_RS12045;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000304.1	RefSeq	gene	6649	7050	.	+	.	ID=gene-STY7866_RS12050;Name=STY7866_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12050
NZ_CAAR01000304.1	Protein Homology	CDS	6649	7050	.	+	0	ID=cds-WP_001772657.1;Parent=gene-STY7866_RS12050;Dbxref=Genbank:WP_001772657.1;Name=WP_001772657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000643727.1;locus_tag=STY7866_RS12050;product=hypothetical protein;protein_id=WP_001772657.1;transl_table=11
NZ_CAAR01000304.1	RefSeq	gene	7119	7577	.	+	.	ID=gene-STY7866_RS12055;Name=STY7866_RS12055;end_range=7577,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS12055;partial=true
NZ_CAAR01000304.1	Protein Homology	CDS	7119	7577	.	+	0	ID=cds-WP_000277024.1;Parent=gene-STY7866_RS12055;Dbxref=Genbank:WP_000277024.1;Name=WP_000277024.1;end_range=7577,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456687.1;locus_tag=STY7866_RS12055;partial=true;product=hypothetical protein;protein_id=WP_000277024.1;transl_table=11
##sequence-region NZ_CAAR01000303.1 1 2430
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000303.1	RefSeq	region	1	2430	.	+	.	ID=NZ_CAAR01000303.1:1..2430;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000303.1	RefSeq	pseudogene	128	1539	.	-	.	ID=gene-STY7866_RS11995;Name=STY7866_RS11995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11995;pseudo=true
NZ_CAAR01000303.1	Protein Homology	CDS	128	1539	.	-	0	ID=cds-STY7866_RS11995;Parent=gene-STY7866_RS11995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457411.1;locus_tag=STY7866_RS11995;product=sugar porter family MFS transporter;pseudo=true;transl_table=11
NZ_CAAR01000303.1	RefSeq	gene	1891	2430	.	-	.	ID=gene-STY7866_RS12000;Name=kduD;end_range=2430,.;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=STY7866_RS12000;partial=true
NZ_CAAR01000303.1	Protein Homology	CDS	1891	2430	.	-	0	ID=cds-WP_000674263.1;Parent=gene-STY7866_RS12000;Dbxref=Genbank:WP_000674263.1;Name=WP_000674263.1;end_range=2430,.;gbkey=CDS;gene=kduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457412.1;locus_tag=STY7866_RS12000;partial=true;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000674263.1;transl_table=11
##sequence-region NZ_CAAR01000302.1 1 4498
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000302.1	RefSeq	region	1	4498	.	+	.	ID=NZ_CAAR01000302.1:1..4498;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000302.1	RefSeq	gene	1	702	.	+	.	ID=gene-STY7866_RS11965;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=STY7866_RS11965;partial=true;start_range=.,1
NZ_CAAR01000302.1	Protein Homology	CDS	1	702	.	+	0	ID=cds-WP_000001630.1;Parent=gene-STY7866_RS11965;Dbxref=Genbank:WP_000001630.1;Name=WP_000001630.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457265.1;locus_tag=STY7866_RS11965;partial=true;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WP_000001630.1;start_range=.,1;transl_table=11
NZ_CAAR01000302.1	RefSeq	gene	674	1273	.	+	.	ID=gene-STY7866_RS11970;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=STY7866_RS11970
NZ_CAAR01000302.1	Protein Homology	CDS	674	1273	.	+	0	ID=cds-WP_077905072.1;Parent=gene-STY7866_RS11970;Dbxref=Genbank:WP_077905072.1;Name=WP_077905072.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=STY7866_RS11970;product=oxygen-regulated invasion protein OrgA;protein_id=WP_077905072.1;transl_table=11
NZ_CAAR01000302.1	RefSeq	gene	1230	1901	.	+	.	ID=gene-STY7866_RS11975;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=STY7866_RS11975
NZ_CAAR01000302.1	Protein Homology	CDS	1230	1901	.	+	0	ID=cds-WP_000916657.1;Parent=gene-STY7866_RS11975;Dbxref=Genbank:WP_000916657.1;Name=WP_000916657.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457263.1;locus_tag=STY7866_RS11975;product=oxygen-regulated invasion protein OrgB;protein_id=WP_000916657.1;transl_table=11
NZ_CAAR01000302.1	RefSeq	gene	1917	2369	.	+	.	ID=gene-STY7866_RS11980;Name=STY7866_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11980
NZ_CAAR01000302.1	Protein Homology	CDS	1917	2369	.	+	0	ID=cds-WP_000612184.1;Parent=gene-STY7866_RS11980;Dbxref=Genbank:WP_000612184.1;Name=WP_000612184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457262.1;locus_tag=STY7866_RS11980;product=type III secretion system effector protein OrgC;protein_id=WP_000612184.1;transl_table=11
NZ_CAAR01000302.1	RefSeq	gene	2714	3601	.	+	.	ID=gene-STY7866_RS11985;Name=sirC;gbkey=Gene;gene=sirC;gene_biotype=protein_coding;locus_tag=STY7866_RS11985
NZ_CAAR01000302.1	Protein Homology	CDS	2714	3601	.	+	0	ID=cds-WP_000243995.1;Parent=gene-STY7866_RS11985;Dbxref=Genbank:WP_000243995.1;Name=WP_000243995.1;gbkey=CDS;gene=sirC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457261.1;locus_tag=STY7866_RS11985;product=transcriptional regulator SirC;protein_id=WP_000243995.1;transl_table=11
NZ_CAAR01000302.1	RefSeq	gene	3986	4498	.	+	.	ID=gene-STY7866_RS11990;Name=STY7866_RS11990;end_range=4498,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11990;partial=true
NZ_CAAR01000302.1	Protein Homology	CDS	3986	4498	.	+	0	ID=cds-WP_001246663.1;Parent=gene-STY7866_RS11990;Dbxref=Genbank:WP_001246663.1;Name=WP_001246663.1;Note=activates Salmonella pathogenicity island 4 genes and weakly represses Salmonella pathogenicity island 1 genes;end_range=4498,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457260.1;locus_tag=STY7866_RS11990;partial=true;product=hypothetical protein;protein_id=WP_001246663.1;transl_table=11
##sequence-region NZ_CAAR01000301.1 1 5836
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000301.1	RefSeq	region	1	5836	.	+	.	ID=NZ_CAAR01000301.1:1..5836;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000301.1	RefSeq	gene	1	1196	.	+	.	ID=gene-STY7866_RS11940;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=STY7866_RS11940;partial=true;start_range=.,1
NZ_CAAR01000301.1	Protein Homology	CDS	1	1196	.	+	2	ID=cds-WP_000327175.1;Parent=gene-STY7866_RS11940;Dbxref=Genbank:WP_000327175.1;Name=WP_000327175.1;gbkey=CDS;gene=ldtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455481.1;locus_tag=STY7866_RS11940;partial=true;product=L%2CD-transpeptidase;protein_id=WP_000327175.1;start_range=.,1;transl_table=11
NZ_CAAR01000301.1	RefSeq	gene	1456	2004	.	+	.	ID=gene-STY7866_RS11945;Name=STY7866_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11945
NZ_CAAR01000301.1	Protein Homology	CDS	1456	2004	.	+	0	ID=cds-WP_000357053.1;Parent=gene-STY7866_RS11945;Dbxref=Genbank:WP_000357053.1;Name=WP_000357053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455482.1;locus_tag=STY7866_RS11945;product=YcbK family protein;protein_id=WP_000357053.1;transl_table=11
NZ_CAAR01000301.1	RefSeq	gene	2032	2679	.	+	.	ID=gene-STY7866_RS11950;Name=STY7866_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11950
NZ_CAAR01000301.1	Protein Homology	CDS	2032	2679	.	+	0	ID=cds-WP_001109472.1;Parent=gene-STY7866_RS11950;Dbxref=Genbank:WP_001109472.1;Name=WP_001109472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=STY7866_RS11950;product=MBL fold metallo-hydrolase;protein_id=WP_001109472.1;transl_table=11
NZ_CAAR01000301.1	RefSeq	gene	2740	3930	.	-	.	ID=gene-STY7866_RS11955;Name=STY7866_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11955
NZ_CAAR01000301.1	Protein Homology	CDS	2740	3930	.	-	0	ID=cds-WP_000462648.1;Parent=gene-STY7866_RS11955;Dbxref=Genbank:WP_000462648.1;Name=WP_000462648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=STY7866_RS11955;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_000462648.1;transl_table=11
NZ_CAAR01000301.1	RefSeq	pseudogene	4115	5205	.	-	.	ID=gene-STY7866_RS11960;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=pseudogene;locus_tag=STY7866_RS11960;pseudo=true
NZ_CAAR01000301.1	Protein Homology	CDS	4115	5205	.	-	0	ID=cds-STY7866_RS11960;Parent=gene-STY7866_RS11960;Note=frameshifted;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455485.1;locus_tag=STY7866_RS11960;product=porin OmpF;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000300.1 1 1984
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000300.1	RefSeq	region	1	1984	.	+	.	ID=NZ_CAAR01000300.1:1..1984;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000300.1	RefSeq	pseudogene	1	1984	.	+	.	ID=gene-STY7866_RS11935;Name=ftsK;end_range=1984,.;gbkey=Gene;gene=ftsK;gene_biotype=pseudogene;locus_tag=STY7866_RS11935;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000300.1	Protein Homology	CDS	1	1984	.	+	1	ID=cds-STY7866_RS11935;Parent=gene-STY7866_RS11935;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1984,.;gbkey=CDS;gene=ftsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455448.1;locus_tag=STY7866_RS11935;partial=true;product=DNA translocase FtsK;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000299.1 1 9432
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000299.1	RefSeq	region	1	9432	.	+	.	ID=NZ_CAAR01000299.1:1..9432;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000299.1	RefSeq	pseudogene	1	366	.	+	.	ID=gene-STY7866_RS11890;Name=STY7866_RS11890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11890;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000299.1	Protein Homology	CDS	1	366	.	+	0	ID=cds-STY7866_RS11890;Parent=gene-STY7866_RS11890;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455053.1;locus_tag=STY7866_RS11890;partial=true;product=SgrR family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000299.1	RefSeq	gene	431	1126	.	+	.	ID=gene-STY7866_RS11895;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=STY7866_RS11895
NZ_CAAR01000299.1	Protein Homology	CDS	431	1126	.	+	0	ID=cds-WP_000817201.1;Parent=gene-STY7866_RS11895;Dbxref=Genbank:WP_000817201.1;Name=WP_000817201.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455052.1;locus_tag=STY7866_RS11895;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817201.1;transl_table=11
NZ_CAAR01000299.1	RefSeq	gene	1233	1631	.	-	.	ID=gene-STY7866_RS11900;Name=STY7866_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11900
NZ_CAAR01000299.1	Protein Homology	CDS	1233	1631	.	-	0	ID=cds-WP_001194543.1;Parent=gene-STY7866_RS11900;Dbxref=Genbank:WP_001194543.1;Name=WP_001194543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455051.1;locus_tag=STY7866_RS11900;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194543.1;transl_table=11
NZ_CAAR01000299.1	RefSeq	gene	1735	2109	.	-	.	ID=gene-STY7866_RS11905;Name=STY7866_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11905
NZ_CAAR01000299.1	Protein Homology	CDS	1735	2109	.	-	0	ID=cds-WP_000680322.1;Parent=gene-STY7866_RS11905;Dbxref=Genbank:WP_000680322.1;Name=WP_000680322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455050.1;locus_tag=STY7866_RS11905;product=hypothetical protein;protein_id=WP_000680322.1;transl_table=11
NZ_CAAR01000299.1	RefSeq	gene	2259	4130	.	-	.	ID=gene-STY7866_RS11910;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=STY7866_RS11910
NZ_CAAR01000299.1	Protein Homology	CDS	2259	4130	.	-	0	ID=cds-WP_000969436.1;Parent=gene-STY7866_RS11910;Dbxref=Genbank:WP_000969436.1;Name=WP_000969436.1;gbkey=CDS;gene=ppiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455049.1;locus_tag=STY7866_RS11910;product=peptidylprolyl isomerase;protein_id=WP_000969436.1;transl_table=11
NZ_CAAR01000299.1	RefSeq	gene	4421	4693	.	-	.	ID=gene-STY7866_RS11915;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=STY7866_RS11915
NZ_CAAR01000299.1	Protein Homology	CDS	4421	4693	.	-	0	ID=cds-WP_001043544.1;Parent=gene-STY7866_RS11915;Dbxref=Genbank:WP_001043544.1;Name=WP_001043544.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1;locus_tag=STY7866_RS11915;product=DNA-binding protein HU-beta;protein_id=WP_001043544.1;transl_table=11
NZ_CAAR01000299.1	RefSeq	gene	4902	7256	.	-	.	ID=gene-STY7866_RS11920;Name=STY7866_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11920
NZ_CAAR01000299.1	Protein Homology	CDS	4902	7256	.	-	0	ID=cds-WP_001067728.1;Parent=gene-STY7866_RS11920;Dbxref=Genbank:WP_001067728.1;Name=WP_001067728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455047.1;locus_tag=STY7866_RS11920;product=endopeptidase La;protein_id=WP_001067728.1;transl_table=11
NZ_CAAR01000299.1	RefSeq	gene	7441	8712	.	-	.	ID=gene-STY7866_RS11925;Name=STY7866_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11925
NZ_CAAR01000299.1	Protein Homology	CDS	7441	8712	.	-	0	ID=cds-WP_000130316.1;Parent=gene-STY7866_RS11925;Dbxref=Genbank:WP_000130316.1;Name=WP_000130316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=STY7866_RS11925;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130316.1;transl_table=11
NZ_CAAR01000299.1	RefSeq	gene	8964	9432	.	-	.	ID=gene-STY7866_RS11930;Name=STY7866_RS11930;end_range=9432,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11930;partial=true
NZ_CAAR01000299.1	Protein Homology	CDS	8964	9432	.	-	1	ID=cds-WP_001284957.1;Parent=gene-STY7866_RS11930;Dbxref=Genbank:WP_001284957.1;Name=WP_001284957.1;end_range=9432,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455045.1;locus_tag=STY7866_RS11930;partial=true;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_001284957.1;transl_table=11
##sequence-region NZ_CAAR01000298.1 1 6290
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000298.1	RefSeq	region	1	6290	.	+	.	ID=NZ_CAAR01000298.1:1..6290;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000298.1	RefSeq	pseudogene	1	90	.	-	.	ID=gene-STY7866_RS11845;Name=STY7866_RS11845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11845;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000298.1	Protein Homology	CDS	1	90	.	-	0	ID=cds-STY7866_RS11845;Parent=gene-STY7866_RS11845;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456044.1;locus_tag=STY7866_RS11845;partial=true;product=phage baseplate assembly protein V;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000298.1	RefSeq	gene	87	1241	.	-	.	ID=gene-STY7866_RS11850;Name=STY7866_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11850
NZ_CAAR01000298.1	Protein Homology	CDS	87	1241	.	-	0	ID=cds-WP_000808000.1;Parent=gene-STY7866_RS11850;Dbxref=Genbank:WP_000808000.1;Name=WP_000808000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456043.1;locus_tag=STY7866_RS11850;product=phage late control D family protein;protein_id=WP_000808000.1;transl_table=11
NZ_CAAR01000298.1	RefSeq	gene	1229	1444	.	-	.	ID=gene-STY7866_RS11855;Name=STY7866_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11855
NZ_CAAR01000298.1	Protein Homology	CDS	1229	1444	.	-	0	ID=cds-WP_010989167.1;Parent=gene-STY7866_RS11855;Dbxref=Genbank:WP_010989167.1;Name=WP_010989167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456042.1;locus_tag=STY7866_RS11855;product=membrane protein;protein_id=WP_010989167.1;transl_table=11
NZ_CAAR01000298.1	RefSeq	gene	1441	2325	.	-	.	ID=gene-STY7866_RS11860;Name=STY7866_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11860
NZ_CAAR01000298.1	Protein Homology	CDS	1441	2325	.	-	0	ID=cds-WP_000458383.1;Parent=gene-STY7866_RS11860;Dbxref=Genbank:WP_000458383.1;Name=WP_000458383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456041.1;locus_tag=STY7866_RS11860;product=phage tail protein;protein_id=WP_000458383.1;transl_table=11
NZ_CAAR01000298.1	RefSeq	gene	2325	4790	.	-	.	ID=gene-STY7866_RS11865;Name=STY7866_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11865
NZ_CAAR01000298.1	Protein Homology	CDS	2325	4790	.	-	0	ID=cds-WP_000135574.1;Parent=gene-STY7866_RS11865;Dbxref=Genbank:WP_000135574.1;Name=WP_000135574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456040.1;locus_tag=STY7866_RS11865;product=phage tail tape measure protein;protein_id=WP_000135574.1;transl_table=11
NZ_CAAR01000298.1	RefSeq	gene	4884	5021	.	-	.	ID=gene-STY7866_RS27250;Name=STY7866_RS27250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27250
NZ_CAAR01000298.1	Protein Homology	CDS	4884	5021	.	-	0	ID=cds-WP_001148841.1;Parent=gene-STY7866_RS27250;Dbxref=Genbank:WP_001148841.1;Name=WP_001148841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122450.1;locus_tag=STY7866_RS27250;product=GpE family phage tail protein;protein_id=WP_001148841.1;transl_table=11
NZ_CAAR01000298.1	RefSeq	gene	4966	5301	.	-	.	ID=gene-STY7866_RS11870;Name=STY7866_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11870
NZ_CAAR01000298.1	Protein Homology	CDS	4966	5301	.	-	0	ID=cds-WP_000084228.1;Parent=gene-STY7866_RS11870;Dbxref=Genbank:WP_000084228.1;Name=WP_000084228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456039.1;locus_tag=STY7866_RS11870;product=phage tail assembly protein;protein_id=WP_000084228.1;transl_table=11
NZ_CAAR01000298.1	RefSeq	gene	5399	5680	.	-	.	ID=gene-STY7866_RS11875;Name=STY7866_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11875
NZ_CAAR01000298.1	Protein Homology	CDS	5399	5680	.	-	0	ID=cds-WP_000110118.1;Parent=gene-STY7866_RS11875;Dbxref=Genbank:WP_000110118.1;Name=WP_000110118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456038.1;locus_tag=STY7866_RS11875;product=hypothetical protein;protein_id=WP_000110118.1;transl_table=11
NZ_CAAR01000298.1	RefSeq	gene	5683	6204	.	-	.	ID=gene-STY7866_RS11880;Name=STY7866_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11880
NZ_CAAR01000298.1	Protein Homology	CDS	5683	6204	.	-	0	ID=cds-WP_000034292.1;Parent=gene-STY7866_RS11880;Dbxref=Genbank:WP_000034292.1;Name=WP_000034292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456037.1;locus_tag=STY7866_RS11880;product=phage major tail tube protein;protein_id=WP_000034292.1;transl_table=11
##sequence-region NZ_CAAR01000297.1 1 9371
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000297.1	RefSeq	region	1	9371	.	+	.	ID=NZ_CAAR01000297.1:1..9371;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000297.1	RefSeq	pseudogene	1	137	.	-	.	ID=gene-STY7866_RS11790;Name=STY7866_RS11790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11790;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000297.1	Protein Homology	CDS	1	137	.	-	0	ID=cds-STY7866_RS11790;Parent=gene-STY7866_RS11790;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456707.1;locus_tag=STY7866_RS11790;partial=true;product=heavy metal resistance protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000297.1	cmsearch	riboswitch	419	515	.	+	.	ID=id-NZ_CAAR01000297.1:419..515;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_CAAR01000297.1	RefSeq	gene	547	1344	.	+	.	ID=gene-STY7866_RS11795;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=STY7866_RS11795
NZ_CAAR01000297.1	Protein Homology	CDS	547	1344	.	+	0	ID=cds-WP_001182157.1;Parent=gene-STY7866_RS11795;Dbxref=Genbank:WP_001182157.1;Name=WP_001182157.1;gbkey=CDS;gene=thiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456706.1;locus_tag=STY7866_RS11795;product=hydroxyethylthiazole kinase;protein_id=WP_001182157.1;transl_table=11
NZ_CAAR01000297.1	RefSeq	gene	1331	2131	.	+	.	ID=gene-STY7866_RS11800;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=STY7866_RS11800
NZ_CAAR01000297.1	Protein Homology	CDS	1331	2131	.	+	0	ID=cds-WP_001188955.1;Parent=gene-STY7866_RS11800;Dbxref=Genbank:WP_001188955.1;Name=WP_001188955.1;gbkey=CDS;gene=thiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456705.1;locus_tag=STY7866_RS11800;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_001188955.1;transl_table=11
NZ_CAAR01000297.1	RefSeq	gene	2167	2913	.	+	.	ID=gene-STY7866_RS11805;Name=STY7866_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11805
NZ_CAAR01000297.1	Protein Homology	CDS	2167	2913	.	+	0	ID=cds-WP_000434062.1;Parent=gene-STY7866_RS11805;Dbxref=Genbank:WP_000434062.1;Name=WP_000434062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456704.1;locus_tag=STY7866_RS11805;product=GntR family transcriptional regulator;protein_id=WP_000434062.1;transl_table=11
NZ_CAAR01000297.1	RefSeq	gene	2887	3852	.	-	.	ID=gene-STY7866_RS11810;Name=STY7866_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11810
NZ_CAAR01000297.1	Protein Homology	CDS	2887	3852	.	-	0	ID=cds-WP_001012656.1;Parent=gene-STY7866_RS11810;Dbxref=Genbank:WP_001012656.1;Name=WP_001012656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456703.1;locus_tag=STY7866_RS11810;product=sugar kinase;protein_id=WP_001012656.1;transl_table=11
NZ_CAAR01000297.1	RefSeq	gene	3849	4853	.	-	.	ID=gene-STY7866_RS11815;Name=STY7866_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11815
NZ_CAAR01000297.1	Protein Homology	CDS	3849	4853	.	-	0	ID=cds-WP_000642789.1;Parent=gene-STY7866_RS11815;Dbxref=Genbank:WP_000642789.1;Name=WP_000642789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456702.1;locus_tag=STY7866_RS11815;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000642789.1;transl_table=11
NZ_CAAR01000297.1	RefSeq	pseudogene	4850	6120	.	-	.	ID=gene-STY7866_RS11820;Name=STY7866_RS11820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11820;pseudo=true
NZ_CAAR01000297.1	Protein Homology	CDS	4850	6120	.	-	0	ID=cds-STY7866_RS11820;Parent=gene-STY7866_RS11820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456701.1;locus_tag=STY7866_RS11820;product=MFS transporter;pseudo=true;transl_table=11
NZ_CAAR01000297.1	RefSeq	gene	6374	7426	.	+	.	ID=gene-STY7866_RS11825;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=STY7866_RS11825
NZ_CAAR01000297.1	Protein Homology	CDS	6374	7426	.	+	0	ID=cds-WP_000129590.1;Parent=gene-STY7866_RS11825;Dbxref=Genbank:WP_000129590.1;Name=WP_000129590.1;gbkey=CDS;gene=fbaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=STY7866_RS11825;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129590.1;transl_table=11
NZ_CAAR01000297.1	RefSeq	pseudogene	7479	8377	.	-	.	ID=gene-STY7866_RS11830;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=pseudogene;locus_tag=STY7866_RS11830;pseudo=true
NZ_CAAR01000297.1	Protein Homology	CDS	7479	8377	.	-	0	ID=cds-STY7866_RS11830;Parent=gene-STY7866_RS11830;Note=frameshifted;gbkey=CDS;gene=yegS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991989.1;locus_tag=STY7866_RS11830;product=lipid kinase YegS;pseudo=true;transl_table=11
NZ_CAAR01000297.1	RefSeq	gene	8942	9277	.	+	.	ID=gene-STY7866_RS11840;Name=STY7866_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11840
NZ_CAAR01000297.1	Protein Homology	CDS	8942	9277	.	+	0	ID=cds-WP_010989208.1;Parent=gene-STY7866_RS11840;Dbxref=Genbank:WP_010989208.1;Name=WP_010989208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456698.1;locus_tag=STY7866_RS11840;product=hypothetical protein;protein_id=WP_010989208.1;transl_table=11
##sequence-region NZ_CAAR01000296.1 1 1836
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000296.1	RefSeq	region	1	1836	.	+	.	ID=NZ_CAAR01000296.1:1..1836;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000296.1	RefSeq	pseudogene	1	195	.	+	.	ID=gene-STY7866_RS11775;Name=STY7866_RS11775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11775;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000296.1	Protein Homology	CDS	1	195	.	+	0	ID=cds-STY7866_RS11775;Parent=gene-STY7866_RS11775;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456311.1;locus_tag=STY7866_RS11775;partial=true;product=SpoVR family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000296.1	RefSeq	gene	242	961	.	-	.	ID=gene-STY7866_RS11780;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=STY7866_RS11780
NZ_CAAR01000296.1	Protein Homology	CDS	242	961	.	-	0	ID=cds-WP_000234821.1;Parent=gene-STY7866_RS11780;Dbxref=Genbank:WP_000234821.1;Name=WP_000234821.1;gbkey=CDS;gene=fadR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456312.1;locus_tag=STY7866_RS11780;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234821.1;transl_table=11
NZ_CAAR01000296.1	RefSeq	pseudogene	1180	1836	.	+	.	ID=gene-STY7866_RS11785;Name=nhaB;end_range=1836,.;gbkey=Gene;gene=nhaB;gene_biotype=pseudogene;locus_tag=STY7866_RS11785;partial=true;pseudo=true
NZ_CAAR01000296.1	Protein Homology	CDS	1180	1836	.	+	0	ID=cds-STY7866_RS11785;Parent=gene-STY7866_RS11785;Note=involved in regulation of intracellular pH under alkaline conditions%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1836,.;gbkey=CDS;gene=nhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456313.1;locus_tag=STY7866_RS11785;partial=true;product=sodium/proton antiporter;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000295.1 1 7869
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000295.1	RefSeq	region	1	7869	.	+	.	ID=NZ_CAAR01000295.1:1..7869;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000295.1	RefSeq	pseudogene	1	807	.	-	.	ID=gene-STY7866_RS11725;Name=STY7866_RS11725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11725;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000295.1	Protein Homology	CDS	1	807	.	-	0	ID=cds-STY7866_RS11725;Parent=gene-STY7866_RS11725;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455819.1;locus_tag=STY7866_RS11725;partial=true;product=TIGR01620 family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000295.1	RefSeq	gene	804	2207	.	-	.	ID=gene-STY7866_RS11730;Name=STY7866_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11730
NZ_CAAR01000295.1	Protein Homology	CDS	804	2207	.	-	0	ID=cds-WP_000062139.1;Parent=gene-STY7866_RS11730;Dbxref=Genbank:WP_000062139.1;Name=WP_000062139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460643.3;locus_tag=STY7866_RS11730;product=YcjX family protein;protein_id=WP_000062139.1;transl_table=11
NZ_CAAR01000295.1	RefSeq	gene	2350	2664	.	-	.	ID=gene-STY7866_RS11735;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=STY7866_RS11735
NZ_CAAR01000295.1	Protein Homology	CDS	2350	2664	.	-	0	ID=cds-WP_000913432.1;Parent=gene-STY7866_RS11735;Dbxref=Genbank:WP_000913432.1;Name=WP_000913432.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455817.1;locus_tag=STY7866_RS11735;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000913432.1;transl_table=11
NZ_CAAR01000295.1	RefSeq	gene	2740	2958	.	-	.	ID=gene-STY7866_RS11740;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=STY7866_RS11740
NZ_CAAR01000295.1	Protein Homology	CDS	2740	2958	.	-	0	ID=cds-WP_001097607.1;Parent=gene-STY7866_RS11740;Dbxref=Genbank:WP_001097607.1;Name=WP_001097607.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455816.1;locus_tag=STY7866_RS11740;product=phage shock protein PspD;protein_id=WP_001097607.1;transl_table=11
NZ_CAAR01000295.1	RefSeq	pseudogene	2981	3341	.	-	.	ID=gene-STY7866_RS11745;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=pseudogene;locus_tag=STY7866_RS11745;pseudo=true
NZ_CAAR01000295.1	Protein Homology	CDS	2981	3341	.	-	0	ID=cds-STY7866_RS11745;Parent=gene-STY7866_RS11745;Note=frameshifted;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455815.1;locus_tag=STY7866_RS11745;product=envelope stress response membrane protein PspC;pseudo=true;transl_table=11
NZ_CAAR01000295.1	RefSeq	gene	3341	3565	.	-	.	ID=gene-STY7866_RS11750;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=STY7866_RS11750
NZ_CAAR01000295.1	Protein Homology	CDS	3341	3565	.	-	0	ID=cds-WP_001274953.1;Parent=gene-STY7866_RS11750;Dbxref=Genbank:WP_001274953.1;Name=WP_001274953.1;gbkey=CDS;gene=pspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455814.1;locus_tag=STY7866_RS11750;product=envelope stress response membrane protein PspB;protein_id=WP_001274953.1;transl_table=11
NZ_CAAR01000295.1	RefSeq	pseudogene	3625	4294	.	-	.	ID=gene-STY7866_RS11755;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=pseudogene;locus_tag=STY7866_RS11755;pseudo=true
NZ_CAAR01000295.1	Protein Homology	CDS	3625	4294	.	-	0	ID=cds-STY7866_RS11755;Parent=gene-STY7866_RS11755;Note=frameshifted;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455813.1;locus_tag=STY7866_RS11755;product=phage shock protein PspA;pseudo=true;transl_table=11
NZ_CAAR01000295.1	RefSeq	gene	4465	5445	.	+	.	ID=gene-STY7866_RS11760;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=STY7866_RS11760
NZ_CAAR01000295.1	Protein Homology	CDS	4465	5445	.	+	0	ID=cds-WP_001764157.1;Parent=gene-STY7866_RS11760;Dbxref=Genbank:WP_001764157.1;Name=WP_001764157.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455812.1;locus_tag=STY7866_RS11760;product=phage shock protein operon transcriptional activator;protein_id=WP_001764157.1;transl_table=11
NZ_CAAR01000295.1	RefSeq	pseudogene	5557	7205	.	+	.	ID=gene-STY7866_RS11765;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=pseudogene;locus_tag=STY7866_RS11765;pseudo=true
NZ_CAAR01000295.1	Protein Homology	CDS	5557	7205	.	+	0	ID=cds-STY7866_RS11765;Parent=gene-STY7866_RS11765;Note=frameshifted;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455811.1;locus_tag=STY7866_RS11765;product=peptide ABC transporter substrate-binding protein SapA;pseudo=true;transl_table=11
NZ_CAAR01000295.1	RefSeq	gene	7202	7869	.	+	.	ID=gene-STY7866_RS11770;Name=sapB;end_range=7869,.;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=STY7866_RS11770;partial=true
NZ_CAAR01000295.1	Protein Homology	CDS	7202	7869	.	+	0	ID=cds-WP_000583296.1;Parent=gene-STY7866_RS11770;Dbxref=Genbank:WP_000583296.1;Name=WP_000583296.1;end_range=7869,.;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=STY7866_RS11770;partial=true;product=peptide ABC transporter permease SapB;protein_id=WP_000583296.1;transl_table=11
##sequence-region NZ_CAAR01000294.1 1 8155
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000294.1	RefSeq	region	1	8155	.	+	.	ID=NZ_CAAR01000294.1:1..8155;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000294.1	RefSeq	gene	1	485	.	-	.	ID=gene-STY7866_RS11685;Name=STY7866_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11685;partial=true;start_range=.,1
NZ_CAAR01000294.1	Protein Homology	CDS	1	485	.	-	0	ID=cds-WP_000586682.1;Parent=gene-STY7866_RS11685;Dbxref=Genbank:WP_000586682.1;Name=WP_000586682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456682.1;locus_tag=STY7866_RS11685;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_000586682.1;start_range=.,1;transl_table=11
NZ_CAAR01000294.1	RefSeq	gene	490	2592	.	-	.	ID=gene-STY7866_RS11690;Name=STY7866_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11690
NZ_CAAR01000294.1	Protein Homology	CDS	490	2592	.	-	0	ID=cds-WP_001764156.1;Parent=gene-STY7866_RS11690;Dbxref=Genbank:WP_001764156.1;Name=WP_001764156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001565154.1;locus_tag=STY7866_RS11690;product=DUF4034 domain-containing protein;protein_id=WP_001764156.1;transl_table=11
NZ_CAAR01000294.1	RefSeq	gene	2613	3329	.	-	.	ID=gene-STY7866_RS11695;Name=STY7866_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11695
NZ_CAAR01000294.1	Protein Homology	CDS	2613	3329	.	-	0	ID=cds-WP_000498581.1;Parent=gene-STY7866_RS11695;Dbxref=Genbank:WP_000498581.1;Name=WP_000498581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=STY7866_RS11695;product=DUF1266 domain-containing protein;protein_id=WP_000498581.1;transl_table=11
NZ_CAAR01000294.1	RefSeq	pseudogene	3329	4515	.	-	.	ID=gene-STY7866_RS11700;Name=STY7866_RS11700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11700;pseudo=true
NZ_CAAR01000294.1	Protein Homology	CDS	3329	4515	.	-	0	ID=cds-STY7866_RS11700;Parent=gene-STY7866_RS11700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=STY7866_RS11700;product=cytoplasmic protein;pseudo=true;transl_table=11
NZ_CAAR01000294.1	RefSeq	gene	4784	5506	.	-	.	ID=gene-STY7866_RS11710;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=STY7866_RS11710
NZ_CAAR01000294.1	Protein Homology	CDS	4784	5506	.	-	0	ID=cds-WP_000137847.1;Parent=gene-STY7866_RS11710;Dbxref=Genbank:WP_000137847.1;Name=WP_000137847.1;gbkey=CDS;gene=baeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456677.1;locus_tag=STY7866_RS11710;product=two-component system response regulator BaeR;protein_id=WP_000137847.1;transl_table=11
NZ_CAAR01000294.1	RefSeq	gene	5503	6906	.	-	.	ID=gene-STY7866_RS11715;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=STY7866_RS11715
NZ_CAAR01000294.1	Protein Homology	CDS	5503	6906	.	-	0	ID=cds-WP_000870082.1;Parent=gene-STY7866_RS11715;Dbxref=Genbank:WP_000870082.1;Name=WP_000870082.1;gbkey=CDS;gene=baeS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456676.1;locus_tag=STY7866_RS11715;product=two-component system sensor histidine kinase BaeS;protein_id=WP_000870082.1;transl_table=11
NZ_CAAR01000294.1	RefSeq	gene	6906	8155	.	-	.	ID=gene-STY7866_RS11720;Name=STY7866_RS11720;end_range=8155,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11720;partial=true
NZ_CAAR01000294.1	Protein Homology	CDS	6906	8155	.	-	2	ID=cds-WP_000707530.1;Parent=gene-STY7866_RS11720;Dbxref=Genbank:WP_000707530.1;Name=WP_000707530.1;end_range=8155,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456675.1;locus_tag=STY7866_RS11720;partial=true;product=MFS transporter;protein_id=WP_000707530.1;transl_table=11
##sequence-region NZ_CAAR01000293.1 1 2363
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000293.1	RefSeq	region	1	2363	.	+	.	ID=NZ_CAAR01000293.1:1..2363;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000293.1	RefSeq	pseudogene	1	2363	.	-	.	ID=gene-STY7866_RS11680;Name=STY7866_RS11680;end_range=2363,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11680;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000293.1	Protein Homology	CDS	1	2363	.	-	1	ID=cds-STY7866_RS11680;Parent=gene-STY7866_RS11680;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;end_range=2363,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=STY7866_RS11680;partial=true;product=efflux RND transporter permease subunit;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000292.1 1 3432
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000292.1	RefSeq	region	1	3432	.	+	.	ID=NZ_CAAR01000292.1:1..3432;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000292.1	RefSeq	gene	1	706	.	+	.	ID=gene-STY7866_RS11660;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=STY7866_RS11660;partial=true;start_range=.,1
NZ_CAAR01000292.1	Protein Homology	CDS	1	706	.	+	1	ID=cds-WP_000430482.1;Parent=gene-STY7866_RS11660;Dbxref=Genbank:WP_000430482.1;Name=WP_000430482.1;gbkey=CDS;gene=oppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=STY7866_RS11660;partial=true;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000430482.1;start_range=.,1;transl_table=11
NZ_CAAR01000292.1	RefSeq	pseudogene	721	1628	.	+	.	ID=gene-STY7866_RS11665;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=pseudogene;locus_tag=STY7866_RS11665;pseudo=true
NZ_CAAR01000292.1	Protein Homology	CDS	721	1628	.	+	0	ID=cds-STY7866_RS11665;Parent=gene-STY7866_RS11665;Note=frameshifted;gbkey=CDS;gene=oppC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=STY7866_RS11665;product=oligopeptide ABC transporter permease OppC;pseudo=true;transl_table=11
NZ_CAAR01000292.1	RefSeq	gene	1640	2647	.	+	.	ID=gene-STY7866_RS11670;Name=STY7866_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11670
NZ_CAAR01000292.1	Protein Homology	CDS	1640	2647	.	+	0	ID=cds-WP_000058853.1;Parent=gene-STY7866_RS11670;Dbxref=Genbank:WP_000058853.1;Name=WP_000058853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455755.1;locus_tag=STY7866_RS11670;product=ABC transporter ATP-binding protein;protein_id=WP_000058853.1;transl_table=11
NZ_CAAR01000292.1	RefSeq	gene	2644	3432	.	+	.	ID=gene-STY7866_RS11675;Name=oppF;end_range=3432,.;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=STY7866_RS11675;partial=true
NZ_CAAR01000292.1	Protein Homology	CDS	2644	3432	.	+	0	ID=cds-WP_000994694.1;Parent=gene-STY7866_RS11675;Dbxref=Genbank:WP_000994694.1;Name=WP_000994694.1;end_range=3432,.;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=STY7866_RS11675;partial=true;product=murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF;protein_id=WP_000994694.1;transl_table=11
##sequence-region NZ_CAAR01000291.1 1 5059
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000291.1	RefSeq	region	1	5059	.	+	.	ID=NZ_CAAR01000291.1:1..5059;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000291.1	RefSeq	pseudogene	1	1403	.	-	.	ID=gene-STY7866_RS11635;Name=STY7866_RS11635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11635;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000291.1	Protein Homology	CDS	1	1403	.	-	0	ID=cds-STY7866_RS11635;Parent=gene-STY7866_RS11635;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458263.1;locus_tag=STY7866_RS11635;partial=true;product=alpha-amylase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000291.1	RefSeq	gene	1719	2543	.	+	.	ID=gene-STY7866_RS11645;Name=STY7866_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11645
NZ_CAAR01000291.1	Protein Homology	CDS	1719	2543	.	+	0	ID=cds-WP_001541103.1;Parent=gene-STY7866_RS11645;Dbxref=Genbank:WP_001541103.1;Name=WP_001541103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458264.1;locus_tag=STY7866_RS11645;product=protein bax;protein_id=WP_001541103.1;transl_table=11
NZ_CAAR01000291.1	RefSeq	gene	2604	3782	.	-	.	ID=gene-STY7866_RS11650;Name=STY7866_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11650
NZ_CAAR01000291.1	Protein Homology	CDS	2604	3782	.	-	0	ID=cds-WP_000459824.1;Parent=gene-STY7866_RS11650;Dbxref=Genbank:WP_000459824.1;Name=WP_000459824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458265.1;locus_tag=STY7866_RS11650;product=XylR family transcriptional regulator;protein_id=WP_000459824.1;transl_table=11
NZ_CAAR01000291.1	RefSeq	gene	4145	5059	.	+	.	ID=gene-STY7866_RS11655;Name=STY7866_RS11655;end_range=5059,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11655;partial=true
NZ_CAAR01000291.1	Protein Homology	CDS	4145	5059	.	+	0	ID=cds-WP_001149567.1;Parent=gene-STY7866_RS11655;Dbxref=Genbank:WP_001149567.1;Name=WP_001149567.1;end_range=5059,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458266.1;locus_tag=STY7866_RS11655;partial=true;product=xylose isomerase;protein_id=WP_001149567.1;transl_table=11
##sequence-region NZ_CAAR01000290.1 1 759
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000290.1	RefSeq	region	1	759	.	+	.	ID=NZ_CAAR01000290.1:1..759;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000290.1	RefSeq	pseudogene	1	759	.	+	.	ID=gene-STY7866_RS11630;Name=STY7866_RS11630;end_range=759,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11630;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000290.1	Protein Homology	CDS	1	759	.	+	0	ID=cds-STY7866_RS11630;Parent=gene-STY7866_RS11630;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=759,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458633.1;locus_tag=STY7866_RS11630;partial=true;product=pilus assembly protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000289.1 1 11643
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000289.1	RefSeq	region	1	11643	.	+	.	ID=NZ_CAAR01000289.1:1..11643;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000289.1	RefSeq	gene	1	1113	.	+	.	ID=gene-STY7866_RS11570;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=STY7866_RS11570;partial=true;start_range=.,1
NZ_CAAR01000289.1	Protein Homology	CDS	1	1113	.	+	0	ID=cds-WP_000552656.1;Parent=gene-STY7866_RS11570;Dbxref=Genbank:WP_000552656.1;Name=WP_000552656.1;gbkey=CDS;gene=cueO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454781.1;locus_tag=STY7866_RS11570;partial=true;product=multicopper oxidase CueO;protein_id=WP_000552656.1;start_range=.,1;transl_table=11
NZ_CAAR01000289.1	RefSeq	gene	1191	3581	.	-	.	ID=gene-STY7866_RS11575;Name=STY7866_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11575
NZ_CAAR01000289.1	Protein Homology	CDS	1191	3581	.	-	0	ID=cds-WP_000829735.1;Parent=gene-STY7866_RS11575;Dbxref=Genbank:WP_000829735.1;Name=WP_000829735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454782.1;locus_tag=STY7866_RS11575;product=pyrroloquinoline quinone-dependent dehydrogenase;protein_id=WP_000829735.1;transl_table=11
NZ_CAAR01000289.1	RefSeq	gene	3787	4323	.	+	.	ID=gene-STY7866_RS11580;Name=STY7866_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11580
NZ_CAAR01000289.1	Protein Homology	CDS	3787	4323	.	+	0	ID=cds-WP_000683333.1;Parent=gene-STY7866_RS11580;Dbxref=Genbank:WP_000683333.1;Name=WP_000683333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454783.1;locus_tag=STY7866_RS11580;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683333.1;transl_table=11
NZ_CAAR01000289.1	RefSeq	gene	4381	5043	.	-	.	ID=gene-STY7866_RS11585;Name=STY7866_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11585
NZ_CAAR01000289.1	Protein Homology	CDS	4381	5043	.	-	0	ID=cds-WP_000651591.1;Parent=gene-STY7866_RS11585;Dbxref=Genbank:WP_000651591.1;Name=WP_000651591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=STY7866_RS11585;product=carbonate dehydratase;protein_id=WP_000651591.1;transl_table=11
NZ_CAAR01000289.1	RefSeq	gene	5152	6078	.	+	.	ID=gene-STY7866_RS11590;Name=STY7866_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11590
NZ_CAAR01000289.1	Protein Homology	CDS	5152	6078	.	+	0	ID=cds-WP_000150629.1;Parent=gene-STY7866_RS11590;Dbxref=Genbank:WP_000150629.1;Name=WP_000150629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454785.1;locus_tag=STY7866_RS11590;product=ABC transporter ATP-binding protein;protein_id=WP_000150629.1;transl_table=11
NZ_CAAR01000289.1	RefSeq	gene	6075	6845	.	+	.	ID=gene-STY7866_RS11595;Name=STY7866_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11595
NZ_CAAR01000289.1	Protein Homology	CDS	6075	6845	.	+	0	ID=cds-WP_000983419.1;Parent=gene-STY7866_RS11595;Dbxref=Genbank:WP_000983419.1;Name=WP_000983419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=STY7866_RS11595;product=ABC transporter permease;protein_id=WP_000983419.1;transl_table=11
NZ_CAAR01000289.1	RefSeq	gene	6950	7390	.	+	.	ID=gene-STY7866_RS11600;Name=STY7866_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11600
NZ_CAAR01000289.1	Protein Homology	CDS	6950	7390	.	+	0	ID=cds-WP_000901966.1;Parent=gene-STY7866_RS11600;Dbxref=Genbank:WP_000901966.1;Name=WP_000901966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454787.1;locus_tag=STY7866_RS11600;product=PTS sugar transporter subunit IIA;protein_id=WP_000901966.1;transl_table=11
NZ_CAAR01000289.1	RefSeq	gene	7452	8681	.	+	.	ID=gene-STY7866_RS11605;Name=STY7866_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11605
NZ_CAAR01000289.1	Protein Homology	CDS	7452	8681	.	+	0	ID=cds-WP_000245324.1;Parent=gene-STY7866_RS11605;Dbxref=Genbank:WP_000245324.1;Name=WP_000245324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=STY7866_RS11605;product=polysaccharide deacetylase family protein;protein_id=WP_000245324.1;transl_table=11
NZ_CAAR01000289.1	RefSeq	gene	8688	9068	.	-	.	ID=gene-STY7866_RS11610;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=STY7866_RS11610
NZ_CAAR01000289.1	Protein Homology	CDS	8688	9068	.	-	0	ID=cds-WP_000621526.1;Parent=gene-STY7866_RS11610;Dbxref=Genbank:WP_000621526.1;Name=WP_000621526.1;gbkey=CDS;gene=panD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=STY7866_RS11610;product=aspartate 1-decarboxylase;protein_id=WP_000621526.1;transl_table=11
NZ_CAAR01000289.1	RefSeq	gene	9163	10017	.	-	.	ID=gene-STY7866_RS11615;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=STY7866_RS11615
NZ_CAAR01000289.1	Protein Homology	CDS	9163	10017	.	-	0	ID=cds-WP_000905353.1;Parent=gene-STY7866_RS11615;Dbxref=Genbank:WP_000905353.1;Name=WP_000905353.1;gbkey=CDS;gene=panC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454790.1;locus_tag=STY7866_RS11615;product=pantoate--beta-alanine ligase;protein_id=WP_000905353.1;transl_table=11
NZ_CAAR01000289.1	RefSeq	gene	10143	10937	.	-	.	ID=gene-STY7866_RS11620;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=STY7866_RS11620
NZ_CAAR01000289.1	Protein Homology	CDS	10143	10937	.	-	0	ID=cds-WP_000043003.1;Parent=gene-STY7866_RS11620;Dbxref=Genbank:WP_000043003.1;Name=WP_000043003.1;gbkey=CDS;gene=panB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454791.1;locus_tag=STY7866_RS11620;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000043003.1;transl_table=11
NZ_CAAR01000289.1	RefSeq	pseudogene	11047	11643	.	-	.	ID=gene-STY7866_RS11625;Name=STY7866_RS11625;end_range=11643,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11625;partial=true;pseudo=true
NZ_CAAR01000289.1	Protein Homology	CDS	11047	11643	.	-	0	ID=cds-STY7866_RS11625;Parent=gene-STY7866_RS11625;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=11643,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000925246.1;locus_tag=STY7866_RS11625;partial=true;product=fimbrial protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000288.1 1 14624
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000288.1	RefSeq	region	1	14624	.	+	.	ID=NZ_CAAR01000288.1:1..14624;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000288.1	RefSeq	pseudogene	1	429	.	-	.	ID=gene-STY7866_RS11525;Name=STY7866_RS11525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11525;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000288.1	Protein Homology	CDS	1	429	.	-	0	ID=cds-STY7866_RS11525;Parent=gene-STY7866_RS11525;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119118.1;locus_tag=STY7866_RS11525;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000288.1	RefSeq	gene	713	895	.	-	.	ID=gene-STY7866_RS11530;Name=STY7866_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11530
NZ_CAAR01000288.1	Protein Homology	CDS	713	895	.	-	0	ID=cds-WP_029139752.1;Parent=gene-STY7866_RS11530;Dbxref=Genbank:WP_029139752.1;Name=WP_029139752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001345327.1;locus_tag=STY7866_RS11530;product=hypothetical protein;protein_id=WP_029139752.1;transl_table=11
NZ_CAAR01000288.1	RefSeq	gene	832	1266	.	-	.	ID=gene-STY7866_RS27240;Name=STY7866_RS27240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27240
NZ_CAAR01000288.1	GeneMarkS-2+	CDS	832	1266	.	-	0	ID=cds-WP_135460447.1;Parent=gene-STY7866_RS27240;Dbxref=Genbank:WP_135460447.1;Name=WP_135460447.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=STY7866_RS27240;product=hypothetical protein;protein_id=WP_135460447.1;transl_table=11
NZ_CAAR01000288.1	RefSeq	pseudogene	1236	1491	.	-	.	ID=gene-STY7866_RS27245;Name=STY7866_RS27245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27245;pseudo=true
NZ_CAAR01000288.1	Protein Homology	CDS	1236	1491	.	-	0	ID=cds-STY7866_RS27245;Parent=gene-STY7866_RS27245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576401.1;locus_tag=STY7866_RS27245;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000288.1	RefSeq	gene	2006	2608	.	+	.	ID=gene-STY7866_RS11540;Name=STY7866_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11540
NZ_CAAR01000288.1	Protein Homology	CDS	2006	2608	.	+	0	ID=cds-WP_077907039.1;Parent=gene-STY7866_RS11540;Dbxref=Genbank:WP_077907039.1;Name=WP_077907039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463357.1;locus_tag=STY7866_RS11540;product=DUF1819 family protein;protein_id=WP_077907039.1;transl_table=11
NZ_CAAR01000288.1	RefSeq	gene	2605	3207	.	+	.	ID=gene-STY7866_RS11545;Name=STY7866_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11545
NZ_CAAR01000288.1	Protein Homology	CDS	2605	3207	.	+	0	ID=cds-WP_000566899.1;Parent=gene-STY7866_RS11545;Dbxref=Genbank:WP_000566899.1;Name=WP_000566899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463356.1;locus_tag=STY7866_RS11545;product=DUF1788 domain-containing protein;protein_id=WP_000566899.1;transl_table=11
NZ_CAAR01000288.1	RefSeq	pseudogene	3219	6861	.	+	.	ID=gene-STY7866_RS11550;Name=brxC;gbkey=Gene;gene=brxC;gene_biotype=pseudogene;locus_tag=STY7866_RS11550;pseudo=true
NZ_CAAR01000288.1	Protein Homology	CDS	3219	6861	.	+	0	ID=cds-STY7866_RS11550;Parent=gene-STY7866_RS11550;Note=frameshifted;gbkey=CDS;gene=brxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463355.1;locus_tag=STY7866_RS11550;product=BREX system P-loop protein BrxC;pseudo=true;transl_table=11
NZ_CAAR01000288.1	RefSeq	gene	6907	10584	.	+	.	ID=gene-STY7866_RS11555;Name=pglX;gbkey=Gene;gene=pglX;gene_biotype=protein_coding;locus_tag=STY7866_RS11555
NZ_CAAR01000288.1	Protein Homology	CDS	6907	10584	.	+	0	ID=cds-WP_001095586.1;Parent=gene-STY7866_RS11555;Dbxref=Genbank:WP_001095586.1;Name=WP_001095586.1;gbkey=CDS;gene=pglX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576403.1;locus_tag=STY7866_RS11555;product=BREX-1 system adenine-specific DNA-methyltransferase PglX;protein_id=WP_001095586.1;transl_table=11
NZ_CAAR01000288.1	RefSeq	gene	10761	13358	.	+	.	ID=gene-STY7866_RS11560;Name=pglZ;gbkey=Gene;gene=pglZ;gene_biotype=protein_coding;locus_tag=STY7866_RS11560
NZ_CAAR01000288.1	Protein Homology	CDS	10761	13358	.	+	0	ID=cds-WP_001180882.1;Parent=gene-STY7866_RS11560;Dbxref=Genbank:WP_001180882.1;Name=WP_001180882.1;gbkey=CDS;gene=pglZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463351.1;locus_tag=STY7866_RS11560;product=BREX-1 system phosphatase PglZ type A;protein_id=WP_001180882.1;transl_table=11
NZ_CAAR01000288.1	RefSeq	gene	13369	14624	.	+	.	ID=gene-STY7866_RS11565;Name=brxL;end_range=14624,.;gbkey=Gene;gene=brxL;gene_biotype=protein_coding;locus_tag=STY7866_RS11565;partial=true
NZ_CAAR01000288.1	Protein Homology	CDS	13369	14624	.	+	0	ID=cds-WP_001764150.1;Parent=gene-STY7866_RS11565;Dbxref=Genbank:WP_001764150.1;Name=WP_001764150.1;end_range=14624,.;gbkey=CDS;gene=brxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463350.1;locus_tag=STY7866_RS11565;partial=true;product=protease Lon-related BREX system protein BrxL;protein_id=WP_001764150.1;transl_table=11
##sequence-region NZ_CAAR01000287.1 1 1246
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000287.1	RefSeq	region	1	1246	.	+	.	ID=NZ_CAAR01000287.1:1..1246;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000287.1	RefSeq	gene	1	519	.	-	.	ID=gene-STY7866_RS11515;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=STY7866_RS11515;partial=true;start_range=.,1
NZ_CAAR01000287.1	Protein Homology	CDS	1	519	.	-	0	ID=cds-WP_024151053.1;Parent=gene-STY7866_RS11515;Dbxref=Genbank:WP_024151053.1;Name=WP_024151053.1;gbkey=CDS;gene=ftsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457959.1;locus_tag=STY7866_RS11515;partial=true;product=cell division protein FtsN;protein_id=WP_024151053.1;start_range=.,1;transl_table=11
NZ_CAAR01000287.1	RefSeq	gene	613	1246	.	-	.	ID=gene-STY7866_RS11520;Name=STY7866_RS11520;end_range=1246,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11520;partial=true
NZ_CAAR01000287.1	Protein Homology	CDS	613	1246	.	-	1	ID=cds-WP_000314049.1;Parent=gene-STY7866_RS11520;Dbxref=Genbank:WP_000314049.1;Name=WP_000314049.1;end_range=1246,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457958.1;locus_tag=STY7866_RS11520;partial=true;product=substrate-binding domain-containing protein;protein_id=WP_000314049.1;transl_table=11
##sequence-region NZ_CAAR01000286.1 1 1386
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000286.1	RefSeq	region	1	1386	.	+	.	ID=NZ_CAAR01000286.1:1..1386;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000286.1	RefSeq	gene	1	1036	.	+	.	ID=gene-STY7866_RS11510;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=STY7866_RS11510;partial=true;start_range=.,1
NZ_CAAR01000286.1	Protein Homology	CDS	1	1036	.	+	1	ID=cds-WP_000320897.1;Parent=gene-STY7866_RS11510;Dbxref=Genbank:WP_000320897.1;Name=WP_000320897.1;gbkey=CDS;gene=lnt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455235.1;locus_tag=STY7866_RS11510;partial=true;product=apolipoprotein N-acyltransferase;protein_id=WP_000320897.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000285.1 1 3809
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000285.1	RefSeq	region	1	3809	.	+	.	ID=NZ_CAAR01000285.1:1..3809;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000285.1	RefSeq	pseudogene	1	134	.	+	.	ID=gene-STY7866_RS11490;Name=STY7866_RS11490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11490;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000285.1	Protein Homology	CDS	1	134	.	+	2	ID=cds-STY7866_RS11490;Parent=gene-STY7866_RS11490;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311575.1;locus_tag=STY7866_RS11490;partial=true;product=multidrug transporter;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000285.1	RefSeq	gene	183	1553	.	-	.	ID=gene-STY7866_RS11495;Name=STY7866_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11495
NZ_CAAR01000285.1	Protein Homology	CDS	183	1553	.	-	0	ID=cds-WP_000645128.1;Parent=gene-STY7866_RS11495;Dbxref=Genbank:WP_000645128.1;Name=WP_000645128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457214.1;locus_tag=STY7866_RS11495;product=glycoporin;protein_id=WP_000645128.1;transl_table=11
NZ_CAAR01000285.1	RefSeq	gene	1899	2414	.	-	.	ID=gene-STY7866_RS11500;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=STY7866_RS11500
NZ_CAAR01000285.1	Protein Homology	CDS	1899	2414	.	-	0	ID=cds-WP_001130194.1;Parent=gene-STY7866_RS11500;Dbxref=Genbank:WP_001130194.1;Name=WP_001130194.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461743.1;locus_tag=STY7866_RS11500;product=S-ribosylhomocysteine lyase;protein_id=WP_001130194.1;transl_table=11
NZ_CAAR01000285.1	RefSeq	gene	2564	3809	.	-	.	ID=gene-STY7866_RS11505;Name=gshA;end_range=3809,.;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=STY7866_RS11505;partial=true
NZ_CAAR01000285.1	Protein Homology	CDS	2564	3809	.	-	1	ID=cds-WP_000296259.1;Parent=gene-STY7866_RS11505;Dbxref=Genbank:WP_000296259.1;Name=WP_000296259.1;end_range=3809,.;gbkey=CDS;gene=gshA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457216.1;locus_tag=STY7866_RS11505;partial=true;product=glutamate--cysteine ligase;protein_id=WP_000296259.1;transl_table=11
##sequence-region NZ_CAAR01000284.1 1 8448
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000284.1	RefSeq	region	1	8448	.	+	.	ID=NZ_CAAR01000284.1:1..8448;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000284.1	RefSeq	gene	107	532	.	+	.	ID=gene-STY7866_RS11450;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=STY7866_RS11450
NZ_CAAR01000284.1	Protein Homology	CDS	107	532	.	+	0	ID=cds-WP_001249902.1;Parent=gene-STY7866_RS11450;Dbxref=Genbank:WP_001249902.1;Name=WP_001249902.1;gbkey=CDS;gene=nudI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456838.1;locus_tag=STY7866_RS11450;product=nucleoside triphosphatase NudI;protein_id=WP_001249902.1;transl_table=11
NZ_CAAR01000284.1	RefSeq	gene	577	1182	.	-	.	ID=gene-STY7866_RS11455;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=STY7866_RS11455
NZ_CAAR01000284.1	Protein Homology	CDS	577	1182	.	-	0	ID=cds-WP_000879245.1;Parent=gene-STY7866_RS11455;Dbxref=Genbank:WP_000879245.1;Name=WP_000879245.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456839.1;locus_tag=STY7866_RS11455;product=lipopolysaccharide core heptose(II)-phosphate phosphatase;protein_id=WP_000879245.1;transl_table=11
NZ_CAAR01000284.1	RefSeq	gene	1475	2614	.	+	.	ID=gene-STY7866_RS11460;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=STY7866_RS11460
NZ_CAAR01000284.1	Protein Homology	CDS	1475	2614	.	+	0	ID=cds-WP_001279286.1;Parent=gene-STY7866_RS11460;Dbxref=Genbank:WP_001279286.1;Name=WP_001279286.1;gbkey=CDS;gene=arnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150690.1;locus_tag=STY7866_RS11460;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_001279286.1;transl_table=11
NZ_CAAR01000284.1	RefSeq	gene	2617	3600	.	+	.	ID=gene-STY7866_RS11465;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=STY7866_RS11465
NZ_CAAR01000284.1	Protein Homology	CDS	2617	3600	.	+	0	ID=cds-WP_000458894.1;Parent=gene-STY7866_RS11465;Dbxref=Genbank:WP_000458894.1;Name=WP_000458894.1;gbkey=CDS;gene=arnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456841.1;locus_tag=STY7866_RS11465;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000458894.1;transl_table=11
NZ_CAAR01000284.1	RefSeq	gene	3597	5579	.	+	.	ID=gene-STY7866_RS11470;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=STY7866_RS11470
NZ_CAAR01000284.1	Protein Homology	CDS	3597	5579	.	+	0	ID=cds-WP_000648774.1;Parent=gene-STY7866_RS11470;Dbxref=Genbank:WP_000648774.1;Name=WP_000648774.1;gbkey=CDS;gene=arnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456842.1;locus_tag=STY7866_RS11470;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_000648774.1;transl_table=11
NZ_CAAR01000284.1	RefSeq	pseudogene	5576	6474	.	+	.	ID=gene-STY7866_RS11475;Name=STY7866_RS11475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11475;pseudo=true
NZ_CAAR01000284.1	Protein Homology	CDS	5576	6474	.	+	0	ID=cds-STY7866_RS11475;Parent=gene-STY7866_RS11475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456843.1;locus_tag=STY7866_RS11475;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;pseudo=true;transl_table=11
NZ_CAAR01000284.1	RefSeq	gene	6471	8117	.	+	.	ID=gene-STY7866_RS11480;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=STY7866_RS11480
NZ_CAAR01000284.1	Protein Homology	CDS	6471	8117	.	+	0	ID=cds-WP_000978048.1;Parent=gene-STY7866_RS11480;Dbxref=Genbank:WP_000978048.1;Name=WP_000978048.1;gbkey=CDS;gene=arnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456844.1;locus_tag=STY7866_RS11480;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_000978048.1;transl_table=11
NZ_CAAR01000284.1	RefSeq	gene	8114	8448	.	+	.	ID=gene-STY7866_RS11485;Name=arnE;end_range=8448,.;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=STY7866_RS11485;partial=true
NZ_CAAR01000284.1	Protein Homology	CDS	8114	8448	.	+	0	ID=cds-WP_000579483.1;Parent=gene-STY7866_RS11485;Dbxref=Genbank:WP_000579483.1;Name=WP_000579483.1;end_range=8448,.;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456845.1;locus_tag=STY7866_RS11485;partial=true;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000579483.1;transl_table=11
##sequence-region NZ_CAAR01000283.1 1 1676
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000283.1	RefSeq	region	1	1676	.	+	.	ID=NZ_CAAR01000283.1:1..1676;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000283.1	RefSeq	pseudogene	1	1676	.	-	.	ID=gene-STY7866_RS11440;Name=STY7866_RS11440;end_range=1676,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11440;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000283.1	Protein Homology	CDS	1	1676	.	-	2	ID=cds-STY7866_RS11440;Parent=gene-STY7866_RS11440;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1676,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=STY7866_RS11440;partial=true;product=Ig-like domain repeat protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000282.1 1 437
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000282.1	RefSeq	region	1	437	.	+	.	ID=NZ_CAAR01000282.1:1..437;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000282.1	RefSeq	gene	1	437	.	+	.	ID=gene-STY7866_RS11435;Name=STY7866_RS11435;end_range=437,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11435;partial=true;start_range=.,1
NZ_CAAR01000282.1	Protein Homology	CDS	1	437	.	+	2	ID=cds-WP_000292269.1;Parent=gene-STY7866_RS11435;Dbxref=Genbank:WP_000292269.1;Name=WP_000292269.1;end_range=437,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466168.1;locus_tag=STY7866_RS11435;partial=true;product=hypothetical protein;protein_id=WP_000292269.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000281.1 1 18839
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000281.1	RefSeq	region	1	18839	.	+	.	ID=NZ_CAAR01000281.1:1..18839;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000281.1	RefSeq	gene	1	1925	.	+	.	ID=gene-STY7866_RS11380;Name=STY7866_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11380;partial=true;start_range=.,1
NZ_CAAR01000281.1	Protein Homology	CDS	1	1925	.	+	2	ID=cds-WP_000292463.1;Parent=gene-STY7866_RS11380;Dbxref=Genbank:WP_000292463.1;Name=WP_000292463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001772474.1;locus_tag=STY7866_RS11380;partial=true;product=hypothetical protein;protein_id=WP_000292463.1;start_range=.,1;transl_table=11
NZ_CAAR01000281.1	RefSeq	gene	1980	8753	.	+	.	ID=gene-STY7866_RS11385;Name=STY7866_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11385
NZ_CAAR01000281.1	Protein Homology	CDS	1980	8753	.	+	0	ID=cds-WP_000228957.1;Parent=gene-STY7866_RS11385;Dbxref=Genbank:WP_000228957.1;Name=WP_000228957.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12245.6;locus_tag=STY7866_RS11385;product=Ig-like domain repeat protein;protein_id=WP_000228957.1;transl_table=11
NZ_CAAR01000281.1	RefSeq	pseudogene	8793	10864	.	+	.	ID=gene-STY7866_RS11390;Name=STY7866_RS11390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11390;pseudo=true
NZ_CAAR01000281.1	Protein Homology	CDS	8793	10864	.	+	0	ID=cds-STY7866_RS11390;Parent=gene-STY7866_RS11390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458560.1;locus_tag=STY7866_RS11390;product=peptidase domain-containing ABC transporter;pseudo=true;transl_table=11
NZ_CAAR01000281.1	RefSeq	gene	11143	11424	.	-	.	ID=gene-STY7866_RS11395;Name=STY7866_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11395
NZ_CAAR01000281.1	Protein Homology	CDS	11143	11424	.	-	0	ID=cds-WP_000719058.1;Parent=gene-STY7866_RS11395;Dbxref=Genbank:WP_000719058.1;Name=WP_000719058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458561.1;locus_tag=STY7866_RS11395;product=membrane protein;protein_id=WP_000719058.1;transl_table=11
NZ_CAAR01000281.1	RefSeq	gene	11986	13587	.	+	.	ID=gene-STY7866_RS11400;Name=STY7866_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11400
NZ_CAAR01000281.1	Protein Homology	CDS	11986	13587	.	+	0	ID=cds-WP_000083646.1;Parent=gene-STY7866_RS11400;Dbxref=Genbank:WP_000083646.1;Name=WP_000083646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458562.1;locus_tag=STY7866_RS11400;product=EAL domain-containing protein;protein_id=WP_000083646.1;transl_table=11
NZ_CAAR01000281.1	RefSeq	gene	13575	13898	.	-	.	ID=gene-STY7866_RS11405;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=STY7866_RS11405
NZ_CAAR01000281.1	Protein Homology	CDS	13575	13898	.	-	0	ID=cds-WP_000019484.1;Parent=gene-STY7866_RS11405;Dbxref=Genbank:WP_000019484.1;Name=WP_000019484.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458563.1;locus_tag=STY7866_RS11405;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019484.1;transl_table=11
NZ_CAAR01000281.1	RefSeq	gene	13985	14443	.	+	.	ID=gene-STY7866_RS11410;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=STY7866_RS11410
NZ_CAAR01000281.1	Protein Homology	CDS	13985	14443	.	+	0	ID=cds-WP_000412686.1;Parent=gene-STY7866_RS11410;Dbxref=Genbank:WP_000412686.1;Name=WP_000412686.1;gbkey=CDS;gene=soxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458564.1;locus_tag=STY7866_RS11410;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412686.1;transl_table=11
NZ_CAAR01000281.1	RefSeq	gene	14736	15404	.	+	.	ID=gene-STY7866_RS11415;Name=STY7866_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11415
NZ_CAAR01000281.1	Protein Homology	CDS	14736	15404	.	+	0	ID=cds-WP_000958574.1;Parent=gene-STY7866_RS11415;Dbxref=Genbank:WP_000958574.1;Name=WP_000958574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458565.1;locus_tag=STY7866_RS11415;product=glutathione S-transferase;protein_id=WP_000958574.1;transl_table=11
NZ_CAAR01000281.1	RefSeq	gene	15751	17100	.	+	.	ID=gene-STY7866_RS11420;Name=STY7866_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11420
NZ_CAAR01000281.1	Protein Homology	CDS	15751	17100	.	+	0	ID=cds-WP_000106903.1;Parent=gene-STY7866_RS11420;Dbxref=Genbank:WP_000106903.1;Name=WP_000106903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=STY7866_RS11420;product=NCS2 family permease;protein_id=WP_000106903.1;transl_table=11
NZ_CAAR01000281.1	RefSeq	gene	17250	18839	.	+	.	ID=gene-STY7866_RS11430;Name=STY7866_RS11430;end_range=18839,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11430;partial=true
NZ_CAAR01000281.1	Protein Homology	CDS	17250	18839	.	+	0	ID=cds-WP_000402188.1;Parent=gene-STY7866_RS11430;Dbxref=Genbank:WP_000402188.1;Name=WP_000402188.1;end_range=18839,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=STY7866_RS11430;partial=true;product=Na+/H+ antiporter;protein_id=WP_000402188.1;transl_table=11
##sequence-region NZ_CAAR01000280.1 1 22432
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000280.1	RefSeq	region	1	22432	.	+	.	ID=NZ_CAAR01000280.1:1..22432;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000280.1	RefSeq	gene	24	437	.	+	.	ID=gene-STY7866_RS11245;Name=STY7866_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11245
NZ_CAAR01000280.1	Protein Homology	CDS	24	437	.	+	0	ID=cds-WP_000754694.1;Parent=gene-STY7866_RS11245;Dbxref=Genbank:WP_000754694.1;Name=WP_000754694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456525.1;locus_tag=STY7866_RS11245;product=lipoprotein;protein_id=WP_000754694.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	477	1961	.	-	.	ID=gene-STY7866_RS11250;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=STY7866_RS11250
NZ_CAAR01000280.1	Protein Homology	CDS	477	1961	.	-	0	ID=cds-WP_000795470.1;Parent=gene-STY7866_RS11250;Dbxref=Genbank:WP_000795470.1;Name=WP_000795470.1;gbkey=CDS;gene=amyA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456524.1;locus_tag=STY7866_RS11250;product=alpha-amylase;protein_id=WP_000795470.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	2033	2401	.	-	.	ID=gene-STY7866_RS11255;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=STY7866_RS11255
NZ_CAAR01000280.1	Protein Homology	CDS	2033	2401	.	-	0	ID=cds-WP_000204899.1;Parent=gene-STY7866_RS11255;Dbxref=Genbank:WP_000204899.1;Name=WP_000204899.1;gbkey=CDS;gene=fliT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456523.1;locus_tag=STY7866_RS11255;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_000204899.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	2401	2808	.	-	.	ID=gene-STY7866_RS11260;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=STY7866_RS11260
NZ_CAAR01000280.1	Protein Homology	CDS	2401	2808	.	-	0	ID=cds-WP_000287765.1;Parent=gene-STY7866_RS11260;Dbxref=Genbank:WP_000287765.1;Name=WP_000287765.1;gbkey=CDS;gene=fliS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456522.1;locus_tag=STY7866_RS11260;product=flagellar export chaperone FliS;protein_id=WP_000287765.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	2823	4226	.	-	.	ID=gene-STY7866_RS11265;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=STY7866_RS11265
NZ_CAAR01000280.1	Protein Homology	CDS	2823	4226	.	-	0	ID=cds-WP_000146805.1;Parent=gene-STY7866_RS11265;Dbxref=Genbank:WP_000146805.1;Name=WP_000146805.1;gbkey=CDS;gene=fliD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456521.1;locus_tag=STY7866_RS11265;product=flagellar filament capping protein FliD;protein_id=WP_000146805.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	4483	6003	.	+	.	ID=gene-STY7866_RS11270;Name=STY7866_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11270
NZ_CAAR01000280.1	Protein Homology	CDS	4483	6003	.	+	0	ID=cds-WP_000079784.1;Parent=gene-STY7866_RS11270;Dbxref=Genbank:WP_000079784.1;Name=WP_000079784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456520.1;locus_tag=STY7866_RS11270;product=FliC/FljB family flagellin;protein_id=WP_000079784.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	pseudogene	6082	7286	.	+	.	ID=gene-STY7866_RS11275;Name=STY7866_RS11275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11275;pseudo=true
NZ_CAAR01000280.1	Protein Homology	CDS	6082	7286	.	+	0	ID=cds-STY7866_RS11275;Parent=gene-STY7866_RS11275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=STY7866_RS11275;product=lysine-N-methylase;pseudo=true;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	7483	8202	.	+	.	ID=gene-STY7866_RS11280;Name=STY7866_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11280
NZ_CAAR01000280.1	Protein Homology	CDS	7483	8202	.	+	0	ID=cds-WP_001087453.1;Parent=gene-STY7866_RS11280;Dbxref=Genbank:WP_001087453.1;Name=WP_001087453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456519.1;locus_tag=STY7866_RS11280;product=RNA polymerase sigma factor FliA;protein_id=WP_001087453.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	8261	8812	.	+	.	ID=gene-STY7866_RS11285;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=STY7866_RS11285
NZ_CAAR01000280.1	Protein Homology	CDS	8261	8812	.	+	0	ID=cds-WP_000218080.1;Parent=gene-STY7866_RS11285;Dbxref=Genbank:WP_000218080.1;Name=WP_000218080.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456518.1;locus_tag=STY7866_RS11285;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_000218080.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	8959	9759	.	+	.	ID=gene-STY7866_RS11290;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=STY7866_RS11290
NZ_CAAR01000280.1	Protein Homology	CDS	8959	9759	.	+	0	ID=cds-WP_000761628.1;Parent=gene-STY7866_RS11290;Dbxref=Genbank:WP_000761628.1;Name=WP_000761628.1;gbkey=CDS;gene=tcyJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456517.1;locus_tag=STY7866_RS11290;product=cystine ABC transporter substrate-binding protein;protein_id=WP_000761628.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	9913	10899	.	+	.	ID=gene-STY7866_RS11295;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=STY7866_RS11295
NZ_CAAR01000280.1	Protein Homology	CDS	9913	10899	.	+	0	ID=cds-WP_001128192.1;Parent=gene-STY7866_RS11295;Dbxref=Genbank:WP_001128192.1;Name=WP_001128192.1;gbkey=CDS;gene=dcyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456516.1;locus_tag=STY7866_RS11295;product=D-cysteine desulfhydrase;protein_id=WP_001128192.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	10920	11588	.	+	.	ID=gene-STY7866_RS11300;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=STY7866_RS11300
NZ_CAAR01000280.1	Protein Homology	CDS	10920	11588	.	+	0	ID=cds-WP_001158238.1;Parent=gene-STY7866_RS11300;Dbxref=Genbank:WP_001158238.1;Name=WP_001158238.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456515.1;locus_tag=STY7866_RS11300;product=cystine ABC transporter permease;protein_id=WP_001158238.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	11585	12337	.	+	.	ID=gene-STY7866_RS11305;Name=yecC;gbkey=Gene;gene=yecC;gene_biotype=protein_coding;locus_tag=STY7866_RS11305
NZ_CAAR01000280.1	Protein Homology	CDS	11585	12337	.	+	0	ID=cds-WP_001273033.1;Parent=gene-STY7866_RS11305;Dbxref=Genbank:WP_001273033.1;Name=WP_001273033.1;gbkey=CDS;gene=yecC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456514.1;locus_tag=STY7866_RS11305;product=L-cystine ABC transporter ATP-binding protein YecC;protein_id=WP_001273033.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	12570	13292	.	+	.	ID=gene-STY7866_RS11310;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=STY7866_RS11310
NZ_CAAR01000280.1	Protein Homology	CDS	12570	13292	.	+	0	ID=cds-WP_001157173.1;Parent=gene-STY7866_RS11310;Dbxref=Genbank:WP_001157173.1;Name=WP_001157173.1;gbkey=CDS;gene=sdiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456513.1;locus_tag=STY7866_RS11310;product=transcriptional regulator SdiA;protein_id=WP_001157173.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	13359	13583	.	-	.	ID=gene-STY7866_RS11315;Name=STY7866_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11315
NZ_CAAR01000280.1	Protein Homology	CDS	13359	13583	.	-	0	ID=cds-WP_000106483.1;Parent=gene-STY7866_RS11315;Dbxref=Genbank:WP_000106483.1;Name=WP_000106483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456512.1;locus_tag=STY7866_RS11315;product=DUF2594 family protein;protein_id=WP_000106483.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	13580	13735	.	-	.	ID=gene-STY7866_RS11320;Name=STY7866_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11320
NZ_CAAR01000280.1	Protein Homology	CDS	13580	13735	.	-	0	ID=cds-WP_000546185.1;Parent=gene-STY7866_RS11320;Dbxref=Genbank:WP_000546185.1;Name=WP_000546185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=STY7866_RS11320;product=hypothetical protein;protein_id=WP_000546185.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	14047	14703	.	+	.	ID=gene-STY7866_RS11325;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=STY7866_RS11325
NZ_CAAR01000280.1	Protein Homology	CDS	14047	14703	.	+	0	ID=cds-WP_000611323.1;Parent=gene-STY7866_RS11325;Dbxref=Genbank:WP_000611323.1;Name=WP_000611323.1;gbkey=CDS;gene=uvrY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456510.1;locus_tag=STY7866_RS11325;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611323.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	14700	16532	.	+	.	ID=gene-STY7866_RS11330;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=STY7866_RS11330
NZ_CAAR01000280.1	Protein Homology	CDS	14700	16532	.	+	0	ID=cds-WP_001289473.1;Parent=gene-STY7866_RS11330;Dbxref=Genbank:WP_001289473.1;Name=WP_001289473.1;gbkey=CDS;gene=uvrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456509.1;locus_tag=STY7866_RS11330;product=excinuclease ABC subunit UvrC;protein_id=WP_001289473.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	16589	17137	.	+	.	ID=gene-STY7866_RS11335;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=STY7866_RS11335
NZ_CAAR01000280.1	Protein Homology	CDS	16589	17137	.	+	0	ID=cds-WP_001160192.1;Parent=gene-STY7866_RS11335;Dbxref=Genbank:WP_001160192.1;Name=WP_001160192.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456508.1;locus_tag=STY7866_RS11335;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160192.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	17289	17364	.	+	.	ID=gene-STY7866_RS11340;Name=STY7866_RS11340;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS11340
NZ_CAAR01000280.1	tRNAscan-SE	tRNA	17289	17364	.	+	.	ID=rna-STY7866_RS11340;Parent=gene-STY7866_RS11340;anticodon=(pos:17322..17324);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS11340;product=tRNA-Gly
NZ_CAAR01000280.1	tRNAscan-SE	exon	17289	17364	.	+	.	ID=exon-STY7866_RS11340-1;Parent=rna-STY7866_RS11340;anticodon=(pos:17322..17324);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS11340;product=tRNA-Gly
NZ_CAAR01000280.1	RefSeq	gene	17417	17490	.	+	.	ID=gene-STY7866_RS11345;Name=STY7866_RS11345;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS11345
NZ_CAAR01000280.1	tRNAscan-SE	tRNA	17417	17490	.	+	.	ID=rna-STY7866_RS11345;Parent=gene-STY7866_RS11345;anticodon=(pos:17449..17451);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS11345;product=tRNA-Cys
NZ_CAAR01000280.1	tRNAscan-SE	exon	17417	17490	.	+	.	ID=exon-STY7866_RS11345-1;Parent=rna-STY7866_RS11345;anticodon=(pos:17449..17451);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS11345;product=tRNA-Cys
NZ_CAAR01000280.1	RefSeq	gene	17502	17588	.	+	.	ID=gene-STY7866_RS11350;Name=STY7866_RS11350;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS11350
NZ_CAAR01000280.1	tRNAscan-SE	tRNA	17502	17588	.	+	.	ID=rna-STY7866_RS11350;Parent=gene-STY7866_RS11350;anticodon=(pos:17536..17538);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS11350;product=tRNA-Leu
NZ_CAAR01000280.1	tRNAscan-SE	exon	17502	17588	.	+	.	ID=exon-STY7866_RS11350-1;Parent=rna-STY7866_RS11350;anticodon=(pos:17536..17538);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS11350;product=tRNA-Leu
NZ_CAAR01000280.1	RefSeq	pseudogene	17838	18168	.	+	.	ID=gene-STY7866_RS11355;Name=STY7866_RS11355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11355;pseudo=true
NZ_CAAR01000280.1	Protein Homology	CDS	17838	18168	.	+	0	ID=cds-STY7866_RS11355;Parent=gene-STY7866_RS11355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=STY7866_RS11355;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000280.1	RefSeq	pseudogene	18382	19822	.	+	.	ID=gene-STY7866_RS11360;Name=STY7866_RS11360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11360;pseudo=true
NZ_CAAR01000280.1	Protein Homology	CDS	18382	19822	.	+	0	ID=cds-STY7866_RS11360;Parent=gene-STY7866_RS11360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=STY7866_RS11360;product=cell wall hydrolase;pseudo=true;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	20035	20361	.	+	.	ID=gene-STY7866_RS11365;Name=STY7866_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11365
NZ_CAAR01000280.1	Protein Homology	CDS	20035	20361	.	+	0	ID=cds-WP_000240835.1;Parent=gene-STY7866_RS11365;Dbxref=Genbank:WP_000240835.1;Name=WP_000240835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=STY7866_RS11365;product=hypothetical protein;protein_id=WP_000240835.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	20600	21265	.	+	.	ID=gene-STY7866_RS11370;Name=STY7866_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11370
NZ_CAAR01000280.1	Protein Homology	CDS	20600	21265	.	+	0	ID=cds-WP_000781529.1;Parent=gene-STY7866_RS11370;Dbxref=Genbank:WP_000781529.1;Name=WP_000781529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456502.1;locus_tag=STY7866_RS11370;product=YecA family protein;protein_id=WP_000781529.1;transl_table=11
NZ_CAAR01000280.1	RefSeq	gene	21340	22432	.	-	.	ID=gene-STY7866_RS11375;Name=tyrP;end_range=22432,.;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=STY7866_RS11375;partial=true
NZ_CAAR01000280.1	Protein Homology	CDS	21340	22432	.	-	1	ID=cds-WP_000530243.1;Parent=gene-STY7866_RS11375;Dbxref=Genbank:WP_000530243.1;Name=WP_000530243.1;end_range=22432,.;gbkey=CDS;gene=tyrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456501.1;locus_tag=STY7866_RS11375;partial=true;product=tyrosine transporter TyrP;protein_id=WP_000530243.1;transl_table=11
##sequence-region NZ_CAAR01000279.1 1 7469
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000279.1	RefSeq	region	1	7469	.	+	.	ID=NZ_CAAR01000279.1:1..7469;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000279.1	RefSeq	pseudogene	1	513	.	-	.	ID=gene-STY7866_RS11205;Name=STY7866_RS11205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11205;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000279.1	Protein Homology	CDS	1	513	.	-	0	ID=cds-STY7866_RS11205;Parent=gene-STY7866_RS11205;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675533.1;locus_tag=STY7866_RS11205;partial=true;product=cation:dicarboxylase symporter family transporter;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000279.1	RefSeq	gene	915	1283	.	+	.	ID=gene-STY7866_RS11210;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=STY7866_RS11210
NZ_CAAR01000279.1	Protein Homology	CDS	915	1283	.	+	0	ID=cds-WP_000418973.1;Parent=gene-STY7866_RS11210;Dbxref=Genbank:WP_000418973.1;Name=WP_000418973.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456155.1;locus_tag=STY7866_RS11210;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000418973.1;transl_table=11
NZ_CAAR01000279.1	RefSeq	gene	1292	2779	.	+	.	ID=gene-STY7866_RS11215;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=STY7866_RS11215
NZ_CAAR01000279.1	Protein Homology	CDS	1292	2779	.	+	0	ID=cds-WP_000089371.1;Parent=gene-STY7866_RS11215;Dbxref=Genbank:WP_000089371.1;Name=WP_000089371.1;gbkey=CDS;gene=sufB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456154.1;locus_tag=STY7866_RS11215;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089371.1;transl_table=11
NZ_CAAR01000279.1	RefSeq	gene	2796	3542	.	+	.	ID=gene-STY7866_RS11220;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=STY7866_RS11220
NZ_CAAR01000279.1	Protein Homology	CDS	2796	3542	.	+	0	ID=cds-WP_000948895.1;Parent=gene-STY7866_RS11220;Dbxref=Genbank:WP_000948895.1;Name=WP_000948895.1;gbkey=CDS;gene=sufC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=STY7866_RS11220;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948895.1;transl_table=11
NZ_CAAR01000279.1	RefSeq	pseudogene	3623	4788	.	+	.	ID=gene-STY7866_RS11225;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=pseudogene;locus_tag=STY7866_RS11225;pseudo=true
NZ_CAAR01000279.1	Protein Homology	CDS	3623	4788	.	+	0	ID=cds-STY7866_RS11225;Parent=gene-STY7866_RS11225;Note=frameshifted;gbkey=CDS;gene=sufD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001804766.1;locus_tag=STY7866_RS11225;product=Fe-S cluster assembly protein SufD;pseudo=true;transl_table=11
NZ_CAAR01000279.1	RefSeq	gene	4785	6005	.	+	.	ID=gene-STY7866_RS11230;Name=STY7866_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11230
NZ_CAAR01000279.1	Protein Homology	CDS	4785	6005	.	+	0	ID=cds-WP_000143859.1;Parent=gene-STY7866_RS11230;Dbxref=Genbank:WP_000143859.1;Name=WP_000143859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456151.1;locus_tag=STY7866_RS11230;product=cysteine desulfurase SufS;protein_id=WP_000143859.1;transl_table=11
NZ_CAAR01000279.1	RefSeq	gene	6018	6434	.	+	.	ID=gene-STY7866_RS11235;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=STY7866_RS11235
NZ_CAAR01000279.1	Protein Homology	CDS	6018	6434	.	+	0	ID=cds-WP_000729470.1;Parent=gene-STY7866_RS11235;Dbxref=Genbank:WP_000729470.1;Name=WP_000729470.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456150.1;locus_tag=STY7866_RS11235;product=cysteine desulfuration protein SufE;protein_id=WP_000729470.1;transl_table=11
NZ_CAAR01000279.1	RefSeq	pseudogene	6589	7469	.	+	.	ID=gene-STY7866_RS11240;Name=STY7866_RS11240;end_range=7469,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11240;partial=true;pseudo=true
NZ_CAAR01000279.1	Protein Homology	CDS	6589	7469	.	+	0	ID=cds-STY7866_RS11240;Parent=gene-STY7866_RS11240;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=7469,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=STY7866_RS11240;partial=true;product=L%2CD-transpeptidase family protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000278.1 1 2765
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000278.1	RefSeq	region	1	2765	.	+	.	ID=NZ_CAAR01000278.1:1..2765;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000278.1	RefSeq	pseudogene	1	464	.	+	.	ID=gene-STY7866_RS11180;Name=STY7866_RS11180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11180;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000278.1	Protein Homology	CDS	1	464	.	+	1	ID=cds-STY7866_RS11180;Parent=gene-STY7866_RS11180;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001275616.1;locus_tag=STY7866_RS11180;partial=true;product=DUF2786 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000278.1	RefSeq	gene	549	1106	.	+	.	ID=gene-STY7866_RS11190;Name=STY7866_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11190
NZ_CAAR01000278.1	Protein Homology	CDS	549	1106	.	+	0	ID=cds-WP_000144322.1;Parent=gene-STY7866_RS11190;Dbxref=Genbank:WP_000144322.1;Name=WP_000144322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458621.1;locus_tag=STY7866_RS11190;product=DUF2857 domain-containing protein;protein_id=WP_000144322.1;transl_table=11
NZ_CAAR01000278.1	RefSeq	gene	1106	1354	.	+	.	ID=gene-STY7866_RS11195;Name=STY7866_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11195
NZ_CAAR01000278.1	Protein Homology	CDS	1106	1354	.	+	0	ID=cds-WP_000377625.1;Parent=gene-STY7866_RS11195;Dbxref=Genbank:WP_000377625.1;Name=WP_000377625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000377625.1;locus_tag=STY7866_RS11195;product=hypothetical protein;protein_id=WP_000377625.1;transl_table=11
NZ_CAAR01000278.1	RefSeq	pseudogene	1351	2692	.	+	.	ID=gene-STY7866_RS11200;Name=STY7866_RS11200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11200;pseudo=true
NZ_CAAR01000278.1	Protein Homology	CDS	1351	2692	.	+	0	ID=cds-STY7866_RS11200;Parent=gene-STY7866_RS11200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458622.1;locus_tag=STY7866_RS11200;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000277.1 1 164
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000277.1	RefSeq	region	1	164	.	+	.	ID=NZ_CAAR01000277.1:1..164;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000276.1 1 4188
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000276.1	RefSeq	region	1	4188	.	+	.	ID=NZ_CAAR01000276.1:1..4188;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000276.1	RefSeq	pseudogene	1	671	.	-	.	ID=gene-STY7866_RS11155;Name=STY7866_RS11155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11155;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000276.1	Protein Homology	CDS	1	671	.	-	0	ID=cds-STY7866_RS11155;Parent=gene-STY7866_RS11155;Note=catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455087.1;locus_tag=STY7866_RS11155;partial=true;product=inosine/guanosine kinase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000276.1	RefSeq	gene	824	1795	.	+	.	ID=gene-STY7866_RS11160;Name=STY7866_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11160
NZ_CAAR01000276.1	Protein Homology	CDS	824	1795	.	+	0	ID=cds-WP_000801788.1;Parent=gene-STY7866_RS11160;Dbxref=Genbank:WP_000801788.1;Name=WP_000801788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455086.1;locus_tag=STY7866_RS11160;product=acetyl esterase;protein_id=WP_000801788.1;transl_table=11
NZ_CAAR01000276.1	RefSeq	gene	1792	2754	.	-	.	ID=gene-STY7866_RS11165;Name=STY7866_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11165
NZ_CAAR01000276.1	Protein Homology	CDS	1792	2754	.	-	0	ID=cds-WP_001250076.1;Parent=gene-STY7866_RS11165;Dbxref=Genbank:WP_001250076.1;Name=WP_001250076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455085.1;locus_tag=STY7866_RS11165;product=ferrochelatase;protein_id=WP_001250076.1;transl_table=11
NZ_CAAR01000276.1	RefSeq	gene	2984	3628	.	-	.	ID=gene-STY7866_RS11170;Name=STY7866_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11170
NZ_CAAR01000276.1	Protein Homology	CDS	2984	3628	.	-	0	ID=cds-WP_001220237.1;Parent=gene-STY7866_RS11170;Dbxref=Genbank:WP_001220237.1;Name=WP_001220237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455084.1;locus_tag=STY7866_RS11170;product=adenylate kinase;protein_id=WP_001220237.1;transl_table=11
NZ_CAAR01000276.1	RefSeq	pseudogene	4044	4188	.	-	.	ID=gene-STY7866_RS11175;Name=STY7866_RS11175;end_range=4188,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11175;partial=true;pseudo=true
NZ_CAAR01000276.1	Protein Homology	CDS	4044	4188	.	-	1	ID=cds-STY7866_RS11175;Parent=gene-STY7866_RS11175;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4188,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455083.1;locus_tag=STY7866_RS11175;partial=true;product=heat-shock protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000275.1 1 1180
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000275.1	RefSeq	region	1	1180	.	+	.	ID=NZ_CAAR01000275.1:1..1180;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000275.1	RefSeq	pseudogene	1	1180	.	-	.	ID=gene-STY7866_RS11150;Name=STY7866_RS11150;end_range=1180,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11150;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000275.1	Protein Homology	CDS	1	1180	.	-	2	ID=cds-STY7866_RS11150;Parent=gene-STY7866_RS11150;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;end_range=1180,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461448.1;locus_tag=STY7866_RS11150;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000274.1 1 7622
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000274.1	RefSeq	region	1	7622	.	+	.	ID=NZ_CAAR01000274.1:1..7622;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000274.1	RefSeq	gene	1	352	.	-	.	ID=gene-STY7866_RS11105;Name=STY7866_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11105;partial=true;start_range=.,1
NZ_CAAR01000274.1	Protein Homology	CDS	1	352	.	-	0	ID=cds-WP_151259999.1;Parent=gene-STY7866_RS11105;Dbxref=Genbank:WP_151259999.1;Name=WP_151259999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458551.1;locus_tag=STY7866_RS11105;partial=true;product=hypothetical protein;protein_id=WP_151259999.1;start_range=.,1;transl_table=11
NZ_CAAR01000274.1	RefSeq	gene	484	3309	.	-	.	ID=gene-STY7866_RS11110;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=STY7866_RS11110
NZ_CAAR01000274.1	Protein Homology	CDS	484	3309	.	-	0	ID=cds-WP_000357724.1;Parent=gene-STY7866_RS11110;Dbxref=Genbank:WP_000357724.1;Name=WP_000357724.1;gbkey=CDS;gene=uvrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458552.1;locus_tag=STY7866_RS11110;product=excinuclease ABC subunit UvrA;protein_id=WP_000357724.1;transl_table=11
NZ_CAAR01000274.1	RefSeq	pseudogene	3557	4086	.	+	.	ID=gene-STY7866_RS11125;Name=STY7866_RS11125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11125;pseudo=true
NZ_CAAR01000274.1	Protein Homology	CDS	3557	4086	.	+	0	ID=cds-STY7866_RS11125;Parent=gene-STY7866_RS11125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458553.1;locus_tag=STY7866_RS11125;product=single-stranded DNA-binding protein SSB1;pseudo=true;transl_table=11
NZ_CAAR01000274.1	RefSeq	gene	4102	4305	.	-	.	ID=gene-STY7866_RS27235;Name=STY7866_RS27235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27235
NZ_CAAR01000274.1	Protein Homology	CDS	4102	4305	.	-	0	ID=cds-WP_071525113.1;Parent=gene-STY7866_RS27235;Dbxref=Genbank:WP_071525113.1;Name=WP_071525113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001692031.1;locus_tag=STY7866_RS27235;product=hypothetical protein;protein_id=WP_071525113.1;transl_table=11
NZ_CAAR01000274.1	RefSeq	gene	5141	5773	.	+	.	ID=gene-STY7866_RS11135;Name=STY7866_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11135
NZ_CAAR01000274.1	Protein Homology	CDS	5141	5773	.	+	0	ID=cds-WP_000389247.1;Parent=gene-STY7866_RS11135;Dbxref=Genbank:WP_000389247.1;Name=WP_000389247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458554.1;locus_tag=STY7866_RS11135;product=hypothetical protein;protein_id=WP_000389247.1;transl_table=11
NZ_CAAR01000274.1	RefSeq	pseudogene	5770	7157	.	+	.	ID=gene-STY7866_RS11140;Name=STY7866_RS11140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11140;pseudo=true
NZ_CAAR01000274.1	Protein Homology	CDS	5770	7157	.	+	0	ID=cds-STY7866_RS11140;Parent=gene-STY7866_RS11140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458555.1;locus_tag=STY7866_RS11140;product=MotA/TolQ/ExbB proton channel family protein;pseudo=true;transl_table=11
NZ_CAAR01000274.1	RefSeq	gene	7147	7622	.	+	.	ID=gene-STY7866_RS11145;Name=STY7866_RS11145;end_range=7622,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11145;partial=true
NZ_CAAR01000274.1	Protein Homology	CDS	7147	7622	.	+	0	ID=cds-WP_000694754.1;Parent=gene-STY7866_RS11145;Dbxref=Genbank:WP_000694754.1;Name=WP_000694754.1;end_range=7622,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458556.1;locus_tag=STY7866_RS11145;partial=true;product=TolC family protein;protein_id=WP_000694754.1;transl_table=11
##sequence-region NZ_CAAR01000273.1 1 8173
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000273.1	RefSeq	region	1	8173	.	+	.	ID=NZ_CAAR01000273.1:1..8173;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000273.1	RefSeq	gene	1	1822	.	-	.	ID=gene-STY7866_RS11080;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=STY7866_RS11080;partial=true;start_range=.,1
NZ_CAAR01000273.1	Protein Homology	CDS	1	1822	.	-	0	ID=cds-WP_000963601.1;Parent=gene-STY7866_RS11080;Dbxref=Genbank:WP_000963601.1;Name=WP_000963601.1;gbkey=CDS;gene=aceF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454767.1;locus_tag=STY7866_RS11080;partial=true;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_000963601.1;start_range=.,1;transl_table=11
NZ_CAAR01000273.1	RefSeq	pseudogene	1837	4501	.	-	.	ID=gene-STY7866_RS11085;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=pseudogene;locus_tag=STY7866_RS11085;pseudo=true
NZ_CAAR01000273.1	Protein Homology	CDS	1837	4501	.	-	0	ID=cds-STY7866_RS11085;Parent=gene-STY7866_RS11085;Note=frameshifted;gbkey=CDS;gene=aceE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454766.1;locus_tag=STY7866_RS11085;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;pseudo=true;transl_table=11
NZ_CAAR01000273.1	RefSeq	gene	4661	5425	.	-	.	ID=gene-STY7866_RS11090;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=STY7866_RS11090
NZ_CAAR01000273.1	Protein Homology	CDS	4661	5425	.	-	0	ID=cds-WP_000331771.1;Parent=gene-STY7866_RS11090;Dbxref=Genbank:WP_000331771.1;Name=WP_000331771.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454765.1;locus_tag=STY7866_RS11090;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331771.1;transl_table=11
NZ_CAAR01000273.1	RefSeq	gene	5988	7361	.	+	.	ID=gene-STY7866_RS11095;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=STY7866_RS11095
NZ_CAAR01000273.1	Protein Homology	CDS	5988	7361	.	+	0	ID=cds-WP_000969487.1;Parent=gene-STY7866_RS11095;Dbxref=Genbank:WP_000969487.1;Name=WP_000969487.1;gbkey=CDS;gene=aroP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=STY7866_RS11095;product=aromatic amino acid transporter AroP;protein_id=WP_000969487.1;transl_table=11
NZ_CAAR01000273.1	RefSeq	pseudogene	7527	8173	.	+	.	ID=gene-STY7866_RS11100;Name=STY7866_RS11100;end_range=8173,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11100;partial=true;pseudo=true
NZ_CAAR01000273.1	Protein Homology	CDS	7527	8173	.	+	0	ID=cds-STY7866_RS11100;Parent=gene-STY7866_RS11100;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=8173,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454763.1;locus_tag=STY7866_RS11100;partial=true;product=MFS transporter;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000272.1 1 4225
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000272.1	RefSeq	region	1	4225	.	+	.	ID=NZ_CAAR01000272.1:1..4225;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000272.1	RefSeq	gene	1	161	.	+	.	ID=gene-STY7866_RS11060;Name=STY7866_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11060;partial=true;start_range=.,1
NZ_CAAR01000272.1	Protein Homology	CDS	1	161	.	+	2	ID=cds-WP_001764131.1;Parent=gene-STY7866_RS11060;Dbxref=Genbank:WP_001764131.1;Name=WP_001764131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=STY7866_RS11060;partial=true;product=tyrosine-type recombinase/integrase;protein_id=WP_001764131.1;start_range=.,1;transl_table=11
NZ_CAAR01000272.1	RefSeq	gene	267	1202	.	+	.	ID=gene-STY7866_RS11065;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=STY7866_RS11065
NZ_CAAR01000272.1	Protein Homology	CDS	267	1202	.	+	0	ID=cds-WP_001156215.1;Parent=gene-STY7866_RS11065;Dbxref=Genbank:WP_001156215.1;Name=WP_001156215.1;gbkey=CDS;gene=ttcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455849.1;locus_tag=STY7866_RS11065;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_001156215.1;transl_table=11
NZ_CAAR01000272.1	RefSeq	pseudogene	1246	2620	.	-	.	ID=gene-STY7866_RS11070;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=pseudogene;locus_tag=STY7866_RS11070;pseudo=true
NZ_CAAR01000272.1	Protein Homology	CDS	1246	2620	.	-	0	ID=cds-STY7866_RS11070;Parent=gene-STY7866_RS11070;Note=frameshifted;gbkey=CDS;gene=dbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=STY7866_RS11070;product=ATP-dependent RNA helicase DbpA;pseudo=true;transl_table=11
NZ_CAAR01000272.1	RefSeq	gene	2649	2831	.	-	.	ID=gene-STY7866_RS27225;Name=STY7866_RS27225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27225
NZ_CAAR01000272.1	Protein Homology	CDS	2649	2831	.	-	0	ID=cds-WP_001750081.1;Parent=gene-STY7866_RS27225;Dbxref=Genbank:WP_001750081.1;Name=WP_001750081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010618423.1;locus_tag=STY7866_RS27225;product=hypothetical protein;protein_id=WP_001750081.1;transl_table=11
NZ_CAAR01000272.1	RefSeq	gene	2931	3140	.	+	.	ID=gene-STY7866_RS27230;Name=STY7866_RS27230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27230
NZ_CAAR01000272.1	Protein Homology	CDS	2931	3140	.	+	0	ID=cds-WP_119957373.1;Parent=gene-STY7866_RS27230;Dbxref=Genbank:WP_119957373.1;Name=WP_119957373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015700232.1;locus_tag=STY7866_RS27230;product=hypothetical protein;protein_id=WP_119957373.1;transl_table=11
NZ_CAAR01000272.1	RefSeq	gene	3106	4089	.	-	.	ID=gene-STY7866_RS11075;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=STY7866_RS11075
NZ_CAAR01000272.1	Protein Homology	CDS	3106	4089	.	-	0	ID=cds-WP_000387372.1;Parent=gene-STY7866_RS11075;Dbxref=Genbank:WP_000387372.1;Name=WP_000387372.1;gbkey=CDS;gene=zntB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455848.1;locus_tag=STY7866_RS11075;product=zinc transporter ZntB;protein_id=WP_000387372.1;transl_table=11
##sequence-region NZ_CAAR01000271.1 1 2549
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000271.1	RefSeq	region	1	2549	.	+	.	ID=NZ_CAAR01000271.1:1..2549;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000271.1	RefSeq	pseudogene	875	2012	.	+	.	ID=gene-STY7866_RS11050;Name=STY7866_RS11050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11050;pseudo=true
NZ_CAAR01000271.1	Protein Homology	CDS	875	2012	.	+	0	ID=cds-STY7866_RS11050;Parent=gene-STY7866_RS11050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456812.1;locus_tag=STY7866_RS11050;product=porin OmpC;pseudo=true;transl_table=11
NZ_CAAR01000271.1	RefSeq	pseudogene	2127	2549	.	+	.	ID=gene-STY7866_RS11055;Name=STY7866_RS11055;end_range=2549,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS11055;partial=true;pseudo=true
NZ_CAAR01000271.1	Protein Homology	CDS	2127	2549	.	+	0	ID=cds-STY7866_RS11055;Parent=gene-STY7866_RS11055;Note=catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine%3B involved in the maintenance and/or assembly of sulfur clusters%3B periplasmic lipoporotein anchored to the inner membrane%3B part of the thiamine pyrophosphate biosynthesis pathway%3B frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2549,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456811.1;locus_tag=STY7866_RS11055;partial=true;product=FAD:protein FMN transferase ApbE;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000270.1 1 9489
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000270.1	RefSeq	region	1	9489	.	+	.	ID=NZ_CAAR01000270.1:1..9489;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000270.1	RefSeq	gene	1	225	.	+	.	ID=gene-STY7866_RS10970;Name=STY7866_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10970;partial=true;start_range=.,1
NZ_CAAR01000270.1	Protein Homology	CDS	1	225	.	+	0	ID=cds-WP_000430577.1;Parent=gene-STY7866_RS10970;Dbxref=Genbank:WP_000430577.1;Name=WP_000430577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991988.1;locus_tag=STY7866_RS10970;partial=true;product=hypothetical protein;protein_id=WP_000430577.1;start_range=.,1;transl_table=11
NZ_CAAR01000270.1	RefSeq	gene	360	435	.	-	.	ID=gene-STY7866_RS10975;Name=STY7866_RS10975;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS10975
NZ_CAAR01000270.1	tRNAscan-SE	tRNA	360	435	.	-	.	ID=rna-STY7866_RS10975;Parent=gene-STY7866_RS10975;anticodon=(pos:complement(400..402));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS10975;product=tRNA-Asn
NZ_CAAR01000270.1	tRNAscan-SE	exon	360	435	.	-	.	ID=exon-STY7866_RS10975-1;Parent=rna-STY7866_RS10975;anticodon=(pos:complement(400..402));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS10975;product=tRNA-Asn
NZ_CAAR01000270.1	RefSeq	gene	983	1058	.	-	.	ID=gene-STY7866_RS10990;Name=STY7866_RS10990;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS10990
NZ_CAAR01000270.1	tRNAscan-SE	tRNA	983	1058	.	-	.	ID=rna-STY7866_RS10990;Parent=gene-STY7866_RS10990;anticodon=(pos:complement(1023..1025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS10990;product=tRNA-Asn
NZ_CAAR01000270.1	tRNAscan-SE	exon	983	1058	.	-	.	ID=exon-STY7866_RS10990-1;Parent=rna-STY7866_RS10990;anticodon=(pos:complement(1023..1025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS10990;product=tRNA-Asn
NZ_CAAR01000270.1	RefSeq	pseudogene	1159	1957	.	-	.	ID=gene-STY7866_RS10995;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=pseudogene;locus_tag=STY7866_RS10995;pseudo=true
NZ_CAAR01000270.1	Protein Homology	CDS	1159	1957	.	-	0	ID=cds-STY7866_RS10995;Parent=gene-STY7866_RS10995;Note=frameshifted;gbkey=CDS;gene=mtfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456559.1;locus_tag=STY7866_RS10995;product=DgsA anti-repressor MtfA;pseudo=true;transl_table=11
NZ_CAAR01000270.1	RefSeq	gene	2046	2135	.	+	.	ID=gene-STY7866_RS11000;Name=STY7866_RS11000;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS11000
NZ_CAAR01000270.1	tRNAscan-SE	tRNA	2046	2135	.	+	.	ID=rna-STY7866_RS11000;Parent=gene-STY7866_RS11000;anticodon=(pos:2080..2082);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS11000;product=tRNA-Ser
NZ_CAAR01000270.1	tRNAscan-SE	exon	2046	2135	.	+	.	ID=exon-STY7866_RS11000-1;Parent=rna-STY7866_RS11000;anticodon=(pos:2080..2082);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS11000;product=tRNA-Ser
NZ_CAAR01000270.1	RefSeq	gene	2438	2599	.	+	.	ID=gene-STY7866_RS11005;Name=STY7866_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11005
NZ_CAAR01000270.1	Protein Homology	CDS	2438	2599	.	+	0	ID=cds-WP_000500833.1;Parent=gene-STY7866_RS11005;Dbxref=Genbank:WP_000500833.1;Name=WP_000500833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532308.1;locus_tag=STY7866_RS11005;product=hypothetical protein;protein_id=WP_000500833.1;transl_table=11
NZ_CAAR01000270.1	RefSeq	gene	2726	3145	.	+	.	ID=gene-STY7866_RS11010;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=STY7866_RS11010
NZ_CAAR01000270.1	Protein Homology	CDS	2726	3145	.	+	0	ID=cds-WP_000394197.1;Parent=gene-STY7866_RS11010;Dbxref=Genbank:WP_000394197.1;Name=WP_000394197.1;gbkey=CDS;gene=umuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456557.1;locus_tag=STY7866_RS11010;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000394197.1;transl_table=11
NZ_CAAR01000270.1	RefSeq	gene	3148	4416	.	+	.	ID=gene-STY7866_RS11015;Name=STY7866_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11015
NZ_CAAR01000270.1	Protein Homology	CDS	3148	4416	.	+	0	ID=cds-WP_000457648.1;Parent=gene-STY7866_RS11015;Dbxref=Genbank:WP_000457648.1;Name=WP_000457648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456556.1;locus_tag=STY7866_RS11015;product=Y-family DNA polymerase;protein_id=WP_000457648.1;transl_table=11
NZ_CAAR01000270.1	RefSeq	gene	4862	5074	.	+	.	ID=gene-STY7866_RS11020;Name=STY7866_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11020
NZ_CAAR01000270.1	Protein Homology	CDS	4862	5074	.	+	0	ID=cds-WP_000208507.1;Parent=gene-STY7866_RS11020;Dbxref=Genbank:WP_000208507.1;Name=WP_000208507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456555.1;locus_tag=STY7866_RS11020;product=cold-shock protein;protein_id=WP_000208507.1;transl_table=11
NZ_CAAR01000270.1	RefSeq	gene	5085	5273	.	+	.	ID=gene-STY7866_RS27220;Name=STY7866_RS27220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27220
NZ_CAAR01000270.1	Protein Homology	CDS	5085	5273	.	+	0	ID=cds-WP_024131163.1;Parent=gene-STY7866_RS27220;Dbxref=Genbank:WP_024131163.1;Name=WP_024131163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=STY7866_RS27220;product=hypothetical protein;protein_id=WP_024131163.1;transl_table=11
NZ_CAAR01000270.1	RefSeq	gene	5534	6718	.	-	.	ID=gene-STY7866_RS11025;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=STY7866_RS11025
NZ_CAAR01000270.1	Protein Homology	CDS	5534	6718	.	-	0	ID=cds-WP_001080666.1;Parent=gene-STY7866_RS11025;Dbxref=Genbank:WP_001080666.1;Name=WP_001080666.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456554.1;locus_tag=STY7866_RS11025;product=porin OmpS1;protein_id=WP_001080666.1;transl_table=11
NZ_CAAR01000270.1	RefSeq	gene	7369	7680	.	+	.	ID=gene-STY7866_RS11030;Name=STY7866_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11030
NZ_CAAR01000270.1	Protein Homology	CDS	7369	7680	.	+	0	ID=cds-WP_000107435.1;Parent=gene-STY7866_RS11030;Dbxref=Genbank:WP_000107435.1;Name=WP_000107435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456553.1;locus_tag=STY7866_RS11030;product=hypothetical protein;protein_id=WP_000107435.1;transl_table=11
NZ_CAAR01000270.1	RefSeq	gene	7760	8455	.	+	.	ID=gene-STY7866_RS11035;Name=STY7866_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS11035
NZ_CAAR01000270.1	Protein Homology	CDS	7760	8455	.	+	0	ID=cds-WP_000377043.1;Parent=gene-STY7866_RS11035;Dbxref=Genbank:WP_000377043.1;Name=WP_000377043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456552.1;locus_tag=STY7866_RS11035;product=phosphohydrolase;protein_id=WP_000377043.1;transl_table=11
NZ_CAAR01000270.1	RefSeq	gene	8529	9489	.	+	.	ID=gene-STY7866_RS11040;Name=dcm;end_range=9489,.;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=STY7866_RS11040;partial=true
NZ_CAAR01000270.1	Protein Homology	CDS	8529	9489	.	+	0	ID=cds-WP_001157298.1;Parent=gene-STY7866_RS11040;Dbxref=Genbank:WP_001157298.1;Name=WP_001157298.1;end_range=9489,.;gbkey=CDS;gene=dcm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456551.1;locus_tag=STY7866_RS11040;partial=true;product=DNA (cytosine-5-)-methyltransferase;protein_id=WP_001157298.1;transl_table=11
##sequence-region NZ_CAAR01000269.1 1 2730
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000269.1	RefSeq	region	1	2730	.	+	.	ID=NZ_CAAR01000269.1:1..2730;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000269.1	RefSeq	pseudogene	1	110	.	-	.	ID=gene-STY7866_RS10960;Name=STY7866_RS10960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10960;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000269.1	Protein Homology	CDS	1	110	.	-	0	ID=cds-STY7866_RS10960;Parent=gene-STY7866_RS10960;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458848.1;locus_tag=STY7866_RS10960;partial=true;product=gamma-glutamylcyclotransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000269.1	RefSeq	gene	113	2730	.	-	.	ID=gene-STY7866_RS10965;Name=tamB;end_range=2730,.;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=STY7866_RS10965;partial=true
NZ_CAAR01000269.1	Protein Homology	CDS	113	2730	.	-	2	ID=cds-WP_000696929.1;Parent=gene-STY7866_RS10965;Dbxref=Genbank:WP_000696929.1;Name=WP_000696929.1;end_range=2730,.;gbkey=CDS;gene=tamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458847.1;locus_tag=STY7866_RS10965;partial=true;product=autotransporter assembly complex protein TamB;protein_id=WP_000696929.1;transl_table=11
##sequence-region NZ_CAAR01000268.1 1 5720
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000268.1	RefSeq	region	1	5720	.	+	.	ID=NZ_CAAR01000268.1:1..5720;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000268.1	RefSeq	gene	1	378	.	+	.	ID=gene-STY7866_RS10905;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=STY7866_RS10905;partial=true;start_range=.,1
NZ_CAAR01000268.1	Protein Homology	CDS	1	378	.	+	0	ID=cds-WP_001184401.1;Parent=gene-STY7866_RS10905;Dbxref=Genbank:WP_001184401.1;Name=WP_001184401.1;gbkey=CDS;gene=csiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457193.1;locus_tag=STY7866_RS10905;partial=true;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_001184401.1;start_range=.,1;transl_table=11
NZ_CAAR01000268.1	RefSeq	pseudogene	400	849	.	-	.	ID=gene-STY7866_RS10910;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=pseudogene;locus_tag=STY7866_RS10910;pseudo=true
NZ_CAAR01000268.1	Protein Homology	CDS	400	849	.	-	0	ID=cds-STY7866_RS10910;Parent=gene-STY7866_RS10910;Note=internal stop;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=STY7866_RS10910;product=peptidoglycan-binding protein LysM;pseudo=true;transl_table=11
NZ_CAAR01000268.1	RefSeq	pseudogene	815	916	.	-	.	ID=gene-STY7866_RS27210;Name=STY7866_RS27210;end_range=916,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27210;partial=true;pseudo=true
NZ_CAAR01000268.1	Protein Homology	CDS	815	916	.	-	0	ID=cds-STY7866_RS27210;Parent=gene-STY7866_RS27210;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=916,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001640746.1;locus_tag=STY7866_RS27210;partial=true;product=uridine kinase;pseudo=true;transl_table=11
NZ_CAAR01000268.1	RefSeq	gene	949	1107	.	-	.	ID=gene-STY7866_RS10915;Name=STY7866_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10915
NZ_CAAR01000268.1	Protein Homology	CDS	949	1107	.	-	0	ID=cds-WP_000508175.1;Parent=gene-STY7866_RS10915;Dbxref=Genbank:WP_000508175.1;Name=WP_000508175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457194.1;locus_tag=STY7866_RS10915;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508175.1;transl_table=11
NZ_CAAR01000268.1	RefSeq	gene	1290	1589	.	+	.	ID=gene-STY7866_RS10920;Name=STY7866_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10920
NZ_CAAR01000268.1	Protein Homology	CDS	1290	1589	.	+	0	ID=cds-WP_000137417.1;Parent=gene-STY7866_RS10920;Dbxref=Genbank:WP_000137417.1;Name=WP_000137417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457195.1;locus_tag=STY7866_RS10920;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000137417.1;transl_table=11
NZ_CAAR01000268.1	RefSeq	gene	1599	2126	.	+	.	ID=gene-STY7866_RS10925;Name=STY7866_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10925
NZ_CAAR01000268.1	Protein Homology	CDS	1599	2126	.	+	0	ID=cds-WP_000022010.1;Parent=gene-STY7866_RS10925;Dbxref=Genbank:WP_000022010.1;Name=WP_000022010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457196.1;locus_tag=STY7866_RS10925;product=DUF2892 domain-containing protein;protein_id=WP_000022010.1;transl_table=11
NZ_CAAR01000268.1	RefSeq	pseudogene	2205	2385	.	+	.	ID=gene-STY7866_RS10930;Name=STY7866_RS10930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10930;pseudo=true
NZ_CAAR01000268.1	Protein Homology	CDS	2205	2385	.	+	0	ID=cds-STY7866_RS10930;Parent=gene-STY7866_RS10930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016154141.1;locus_tag=STY7866_RS10930;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000268.1	RefSeq	gene	2475	2876	.	-	.	ID=gene-STY7866_RS10935;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=STY7866_RS10935
NZ_CAAR01000268.1	Protein Homology	CDS	2475	2876	.	-	0	ID=cds-WP_001051100.1;Parent=gene-STY7866_RS10935;Dbxref=Genbank:WP_001051100.1;Name=WP_001051100.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457198.1;locus_tag=STY7866_RS10935;product=DNA-binding protein StpA;protein_id=WP_001051100.1;transl_table=11
NZ_CAAR01000268.1	RefSeq	pseudogene	3369	3549	.	+	.	ID=gene-STY7866_RS27215;Name=STY7866_RS27215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27215;pseudo=true
NZ_CAAR01000268.1	Protein Homology	CDS	3369	3549	.	+	0	ID=cds-STY7866_RS27215;Parent=gene-STY7866_RS27215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662860.1;locus_tag=STY7866_RS27215;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000268.1	RefSeq	gene	3575	4024	.	+	.	ID=gene-STY7866_RS10940;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=STY7866_RS10940
NZ_CAAR01000268.1	Protein Homology	CDS	3575	4024	.	+	0	ID=cds-WP_000492647.1;Parent=gene-STY7866_RS10940;Dbxref=Genbank:WP_000492647.1;Name=WP_000492647.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457199.1;locus_tag=STY7866_RS10940;product=L-alanine exporter AlaE;protein_id=WP_000492647.1;transl_table=11
NZ_CAAR01000268.1	RefSeq	gene	4059	4409	.	-	.	ID=gene-STY7866_RS10945;Name=STY7866_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10945
NZ_CAAR01000268.1	Protein Homology	CDS	4059	4409	.	-	0	ID=cds-WP_000281304.1;Parent=gene-STY7866_RS10945;Dbxref=Genbank:WP_000281304.1;Name=WP_000281304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457200.1;locus_tag=STY7866_RS10945;product=YgaC family protein;protein_id=WP_000281304.1;transl_table=11
NZ_CAAR01000268.1	RefSeq	gene	4571	4897	.	+	.	ID=gene-STY7866_RS10950;Name=STY7866_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10950
NZ_CAAR01000268.1	Protein Homology	CDS	4571	4897	.	+	0	ID=cds-WP_001519557.1;Parent=gene-STY7866_RS10950;Dbxref=Genbank:WP_001519557.1;Name=WP_001519557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457201.1;locus_tag=STY7866_RS10950;product=DUF883 domain-containing protein;protein_id=WP_001519557.1;transl_table=11
NZ_CAAR01000268.1	RefSeq	gene	4981	5720	.	-	.	ID=gene-STY7866_RS10955;Name=STY7866_RS10955;end_range=5720,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10955;partial=true
NZ_CAAR01000268.1	Protein Homology	CDS	4981	5720	.	-	2	ID=cds-WP_000631072.1;Parent=gene-STY7866_RS10955;Dbxref=Genbank:WP_000631072.1;Name=WP_000631072.1;end_range=5720,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=STY7866_RS10955;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_000631072.1;transl_table=11
##sequence-region NZ_CAAR01000267.1 1 104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000267.1	RefSeq	region	1	104	.	+	.	ID=NZ_CAAR01000267.1:1..104;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000266.1 1 5650
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000266.1	RefSeq	region	1	5650	.	+	.	ID=NZ_CAAR01000266.1:1..5650;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000266.1	RefSeq	pseudogene	1	1542	.	+	.	ID=gene-STY7866_RS10880;Name=STY7866_RS10880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10880;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000266.1	Protein Homology	CDS	1	1542	.	+	1	ID=cds-STY7866_RS10880;Parent=gene-STY7866_RS10880;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=STY7866_RS10880;partial=true;product=aryl-sulfate sulfotransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000266.1	RefSeq	gene	1743	2405	.	+	.	ID=gene-STY7866_RS10885;Name=STY7866_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10885
NZ_CAAR01000266.1	Protein Homology	CDS	1743	2405	.	+	0	ID=cds-WP_000792797.1;Parent=gene-STY7866_RS10885;Dbxref=Genbank:WP_000792797.1;Name=WP_000792797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457955.1;locus_tag=STY7866_RS10885;product=TIGR02117 family protein;protein_id=WP_000792797.1;transl_table=11
NZ_CAAR01000266.1	RefSeq	gene	2451	2663	.	-	.	ID=gene-STY7866_RS10890;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=STY7866_RS10890
NZ_CAAR01000266.1	Protein Homology	CDS	2451	2663	.	-	0	ID=cds-WP_000715284.1;Parent=gene-STY7866_RS10890;Dbxref=Genbank:WP_000715284.1;Name=WP_000715284.1;gbkey=CDS;gene=rpmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457956.1;locus_tag=STY7866_RS10890;product=50S ribosomal protein L31;protein_id=WP_000715284.1;transl_table=11
NZ_CAAR01000266.1	RefSeq	gene	2867	5065	.	+	.	ID=gene-STY7866_RS10895;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=STY7866_RS10895
NZ_CAAR01000266.1	Protein Homology	CDS	2867	5065	.	+	0	ID=cds-WP_000109394.1;Parent=gene-STY7866_RS10895;Dbxref=Genbank:WP_000109394.1;Name=WP_000109394.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457957.1;locus_tag=STY7866_RS10895;product=primosomal protein N';protein_id=WP_000109394.1;transl_table=11
NZ_CAAR01000266.1	RefSeq	gene	5220	5650	.	+	.	ID=gene-STY7866_RS10900;Name=STY7866_RS10900;end_range=5650,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10900;partial=true
NZ_CAAR01000266.1	Protein Homology	CDS	5220	5650	.	+	0	ID=cds-WP_000841332.1;Parent=gene-STY7866_RS10900;Dbxref=Genbank:WP_000841332.1;Name=WP_000841332.1;end_range=5650,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457958.1;locus_tag=STY7866_RS10900;partial=true;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000841332.1;transl_table=11
##sequence-region NZ_CAAR01000265.1 1 524
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000265.1	RefSeq	region	1	524	.	+	.	ID=NZ_CAAR01000265.1:1..524;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000265.1	RefSeq	gene	1	524	.	-	.	ID=gene-STY7866_RS10875;Name=STY7866_RS10875;end_range=524,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10875;partial=true;start_range=.,1
NZ_CAAR01000265.1	Protein Homology	CDS	1	524	.	-	0	ID=cds-WP_000304771.1;Parent=gene-STY7866_RS10875;Dbxref=Genbank:WP_000304771.1;Name=WP_000304771.1;end_range=524,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455561.1;locus_tag=STY7866_RS10875;partial=true;product=PqiA/YebS family transporter subunit;protein_id=WP_000304771.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000264.1 1 6039
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000264.1	RefSeq	region	1	6039	.	+	.	ID=NZ_CAAR01000264.1:1..6039;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000264.1	RefSeq	gene	1	370	.	-	.	ID=gene-STY7866_RS10845;Name=STY7866_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10845;partial=true;start_range=.,1
NZ_CAAR01000264.1	Protein Homology	CDS	1	370	.	-	0	ID=cds-WP_001253770.1;Parent=gene-STY7866_RS10845;Dbxref=Genbank:WP_001253770.1;Name=WP_001253770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001253771.1;locus_tag=STY7866_RS10845;partial=true;product=hypothetical protein;protein_id=WP_001253770.1;start_range=.,1;transl_table=11
NZ_CAAR01000264.1	RefSeq	gene	411	968	.	-	.	ID=gene-STY7866_RS10850;Name=STY7866_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10850
NZ_CAAR01000264.1	Protein Homology	CDS	411	968	.	-	0	ID=cds-WP_001056988.1;Parent=gene-STY7866_RS10850;Dbxref=Genbank:WP_001056988.1;Name=WP_001056988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458998.1;locus_tag=STY7866_RS10850;product=fimbrial protein SthD;protein_id=WP_001056988.1;transl_table=11
NZ_CAAR01000264.1	RefSeq	pseudogene	986	3522	.	-	.	ID=gene-STY7866_RS10855;Name=STY7866_RS10855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10855;pseudo=true
NZ_CAAR01000264.1	Protein Homology	CDS	986	3522	.	-	0	ID=cds-STY7866_RS10855;Parent=gene-STY7866_RS10855;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=STY7866_RS10855;product=fimbrial outer membrane usher protein;pseudo=true;transl_table=11
NZ_CAAR01000264.1	RefSeq	gene	3568	4251	.	-	.	ID=gene-STY7866_RS10860;Name=STY7866_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10860
NZ_CAAR01000264.1	Protein Homology	CDS	3568	4251	.	-	0	ID=cds-WP_000680527.1;Parent=gene-STY7866_RS10860;Dbxref=Genbank:WP_000680527.1;Name=WP_000680527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458999.1;locus_tag=STY7866_RS10860;product=fimbrial assembly chaperone;protein_id=WP_000680527.1;transl_table=11
NZ_CAAR01000264.1	RefSeq	gene	4322	4867	.	-	.	ID=gene-STY7866_RS10865;Name=STY7866_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10865
NZ_CAAR01000264.1	Protein Homology	CDS	4322	4867	.	-	0	ID=cds-WP_000482240.1;Parent=gene-STY7866_RS10865;Dbxref=Genbank:WP_000482240.1;Name=WP_000482240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459000.1;locus_tag=STY7866_RS10865;product=fimbrial protein SthA;protein_id=WP_000482240.1;transl_table=11
NZ_CAAR01000264.1	RefSeq	gene	5206	5877	.	-	.	ID=gene-STY7866_RS10870;Name=STY7866_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10870
NZ_CAAR01000264.1	Protein Homology	CDS	5206	5877	.	-	0	ID=cds-WP_000811633.1;Parent=gene-STY7866_RS10870;Dbxref=Genbank:WP_000811633.1;Name=WP_000811633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459001.1;locus_tag=STY7866_RS10870;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000811633.1;transl_table=11
##sequence-region NZ_CAAR01000263.1 1 5658
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000263.1	RefSeq	region	1	5658	.	+	.	ID=NZ_CAAR01000263.1:1..5658;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000263.1	RefSeq	gene	41	682	.	-	.	ID=gene-STY7866_RS10810;Name=STY7866_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10810
NZ_CAAR01000263.1	Protein Homology	CDS	41	682	.	-	0	ID=cds-WP_000535399.1;Parent=gene-STY7866_RS10810;Dbxref=Genbank:WP_000535399.1;Name=WP_000535399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455693.1;locus_tag=STY7866_RS10810;product=dTMP kinase;protein_id=WP_000535399.1;transl_table=11
NZ_CAAR01000263.1	RefSeq	gene	672	1688	.	-	.	ID=gene-STY7866_RS10815;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=STY7866_RS10815
NZ_CAAR01000263.1	Protein Homology	CDS	672	1688	.	-	0	ID=cds-WP_000736473.1;Parent=gene-STY7866_RS10815;Dbxref=Genbank:WP_000736473.1;Name=WP_000736473.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455692.1;locus_tag=STY7866_RS10815;product=cell division protein YceG;protein_id=WP_000736473.1;transl_table=11
NZ_CAAR01000263.1	RefSeq	gene	1691	2500	.	-	.	ID=gene-STY7866_RS10820;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=STY7866_RS10820
NZ_CAAR01000263.1	Protein Homology	CDS	1691	2500	.	-	0	ID=cds-WP_000478660.1;Parent=gene-STY7866_RS10820;Dbxref=Genbank:WP_000478660.1;Name=WP_000478660.1;gbkey=CDS;gene=pabC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455691.1;locus_tag=STY7866_RS10820;product=aminodeoxychorismate lyase;protein_id=WP_000478660.1;transl_table=11
NZ_CAAR01000263.1	RefSeq	gene	2624	3865	.	-	.	ID=gene-STY7866_RS10825;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=STY7866_RS10825
NZ_CAAR01000263.1	Protein Homology	CDS	2624	3865	.	-	0	ID=cds-WP_000044667.1;Parent=gene-STY7866_RS10825;Dbxref=Genbank:WP_000044667.1;Name=WP_000044667.1;gbkey=CDS;gene=fabF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129014.1;locus_tag=STY7866_RS10825;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044667.1;transl_table=11
NZ_CAAR01000263.1	RefSeq	gene	3951	4187	.	-	.	ID=gene-STY7866_RS10830;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=STY7866_RS10830
NZ_CAAR01000263.1	Protein Homology	CDS	3951	4187	.	-	0	ID=cds-WP_000103754.1;Parent=gene-STY7866_RS10830;Dbxref=Genbank:WP_000103754.1;Name=WP_000103754.1;gbkey=CDS;gene=acpP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=STY7866_RS10830;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11
NZ_CAAR01000263.1	RefSeq	gene	4343	5077	.	-	.	ID=gene-STY7866_RS10835;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=STY7866_RS10835
NZ_CAAR01000263.1	Protein Homology	CDS	4343	5077	.	-	0	ID=cds-WP_000007236.1;Parent=gene-STY7866_RS10835;Dbxref=Genbank:WP_000007236.1;Name=WP_000007236.1;gbkey=CDS;gene=fabG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=STY7866_RS10835;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_000007236.1;transl_table=11
NZ_CAAR01000263.1	RefSeq	pseudogene	5090	5658	.	-	.	ID=gene-STY7866_RS10840;Name=STY7866_RS10840;end_range=5658,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10840;partial=true;pseudo=true
NZ_CAAR01000263.1	Protein Homology	CDS	5090	5658	.	-	2	ID=cds-STY7866_RS10840;Parent=gene-STY7866_RS10840;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5658,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455687.1;locus_tag=STY7866_RS10840;partial=true;product=ACP S-malonyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000262.1 1 1614
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000262.1	RefSeq	region	1	1614	.	+	.	ID=NZ_CAAR01000262.1:1..1614;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000262.1	RefSeq	pseudogene	1	109	.	-	.	ID=gene-STY7866_RS10790;Name=STY7866_RS10790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10790;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000262.1	Protein Homology	CDS	1	109	.	-	0	ID=cds-STY7866_RS10790;Parent=gene-STY7866_RS10790;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454984.1;locus_tag=STY7866_RS10790;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000262.1	RefSeq	gene	136	681	.	-	.	ID=gene-STY7866_RS10795;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=STY7866_RS10795
NZ_CAAR01000262.1	Protein Homology	CDS	136	681	.	-	0	ID=cds-WP_000983569.1;Parent=gene-STY7866_RS10795;Dbxref=Genbank:WP_000983569.1;Name=WP_000983569.1;gbkey=CDS;gene=aroL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454983.1;locus_tag=STY7866_RS10795;product=shikimate kinase AroL;protein_id=WP_000983569.1;transl_table=11
NZ_CAAR01000262.1	RefSeq	gene	866	1321	.	-	.	ID=gene-STY7866_RS10800;Name=STY7866_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10800
NZ_CAAR01000262.1	Protein Homology	CDS	866	1321	.	-	0	ID=cds-WP_000158137.1;Parent=gene-STY7866_RS10800;Dbxref=Genbank:WP_000158137.1;Name=WP_000158137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454982.1;locus_tag=STY7866_RS10800;product=YaiI/YqxD family protein;protein_id=WP_000158137.1;transl_table=11
NZ_CAAR01000262.1	RefSeq	pseudogene	1461	1614	.	+	.	ID=gene-STY7866_RS10805;Name=STY7866_RS10805;end_range=1614,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10805;partial=true;pseudo=true
NZ_CAAR01000262.1	Protein Homology	CDS	1461	1614	.	+	0	ID=cds-STY7866_RS10805;Parent=gene-STY7866_RS10805;Note=catalyzes the formation of L-proline from pyrroline-5-carboxylate%3B frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1614,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454981.1;locus_tag=STY7866_RS10805;partial=true;product=pyrroline-5-carboxylate reductase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000261.1 1 4924
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000261.1	RefSeq	region	1	4924	.	+	.	ID=NZ_CAAR01000261.1:1..4924;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000261.1	RefSeq	pseudogene	1	413	.	+	.	ID=gene-STY7866_RS10750;Name=STY7866_RS10750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10750;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000261.1	Protein Homology	CDS	1	413	.	+	2	ID=cds-STY7866_RS10750;Parent=gene-STY7866_RS10750;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455210.1;locus_tag=STY7866_RS10750;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000261.1	RefSeq	gene	619	1584	.	+	.	ID=gene-STY7866_RS10755;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=STY7866_RS10755
NZ_CAAR01000261.1	Protein Homology	CDS	619	1584	.	+	0	ID=cds-WP_000042640.1;Parent=gene-STY7866_RS10755;Dbxref=Genbank:WP_000042640.1;Name=WP_000042640.1;gbkey=CDS;gene=lipA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=STY7866_RS10755;product=lipoyl synthase;protein_id=WP_000042640.1;transl_table=11
NZ_CAAR01000261.1	RefSeq	gene	1667	1873	.	-	.	ID=gene-STY7866_RS10760;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=STY7866_RS10760
NZ_CAAR01000261.1	Protein Homology	CDS	1667	1873	.	-	0	ID=cds-WP_000503939.1;Parent=gene-STY7866_RS10760;Dbxref=Genbank:WP_000503939.1;Name=WP_000503939.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503939.1;locus_tag=STY7866_RS10760;product=twin-arginine translocase subunit TatE;protein_id=WP_000503939.1;transl_table=11
NZ_CAAR01000261.1	RefSeq	pseudogene	2001	2788	.	-	.	ID=gene-STY7866_RS10765;Name=STY7866_RS10765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10765;pseudo=true
NZ_CAAR01000261.1	Protein Homology	CDS	2001	2788	.	-	0	ID=cds-STY7866_RS10765;Parent=gene-STY7866_RS10765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000959101.1;locus_tag=STY7866_RS10765;product=deaminated glutathione amidase;pseudo=true;transl_table=11
NZ_CAAR01000261.1	RefSeq	gene	2879	3262	.	+	.	ID=gene-STY7866_RS10770;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=STY7866_RS10770
NZ_CAAR01000261.1	Protein Homology	CDS	2879	3262	.	+	0	ID=cds-WP_000939753.1;Parent=gene-STY7866_RS10770;Dbxref=Genbank:WP_000939753.1;Name=WP_000939753.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455207.1;locus_tag=STY7866_RS10770;product=fluoride efflux transporter CrcB;protein_id=WP_000939753.1;transl_table=11
NZ_CAAR01000261.1	RefSeq	gene	3321	3530	.	-	.	ID=gene-STY7866_RS10775;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=STY7866_RS10775
NZ_CAAR01000261.1	Protein Homology	CDS	3321	3530	.	-	0	ID=cds-WP_000034826.1;Parent=gene-STY7866_RS10775;Dbxref=Genbank:WP_000034826.1;Name=WP_000034826.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455206.1;locus_tag=STY7866_RS10775;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034826.1;transl_table=11
NZ_CAAR01000261.1	RefSeq	gene	3718	4290	.	-	.	ID=gene-STY7866_RS10780;Name=pagp;gbkey=Gene;gene=pagp;gene_biotype=protein_coding;locus_tag=STY7866_RS10780
NZ_CAAR01000261.1	Protein Homology	CDS	3718	4290	.	-	0	ID=cds-WP_001784638.1;Parent=gene-STY7866_RS10780;Dbxref=Genbank:WP_001784638.1;Name=WP_001784638.1;gbkey=CDS;gene=pagp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455205.1;locus_tag=STY7866_RS10780;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001784638.1;transl_table=11
NZ_CAAR01000261.1	RefSeq	pseudogene	4670	4924	.	+	.	ID=gene-STY7866_RS10785;Name=dcuC;end_range=4924,.;gbkey=Gene;gene=dcuC;gene_biotype=pseudogene;locus_tag=STY7866_RS10785;partial=true;pseudo=true
NZ_CAAR01000261.1	Protein Homology	CDS	4670	4924	.	+	0	ID=cds-STY7866_RS10785;Parent=gene-STY7866_RS10785;Note=responsible for the transport of C4-dicarboxylates during anaerobic growth%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4924,.;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455204.1;locus_tag=STY7866_RS10785;partial=true;product=anaerobic C4-dicarboxylate transporter DcuC;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000260.1 1 9625
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000260.1	RefSeq	region	1	9625	.	+	.	ID=NZ_CAAR01000260.1:1..9625;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000260.1	RefSeq	gene	223	1065	.	-	.	ID=gene-STY7866_RS10705;Name=STY7866_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10705
NZ_CAAR01000260.1	Protein Homology	CDS	223	1065	.	-	0	ID=cds-WP_000954235.1;Parent=gene-STY7866_RS10705;Dbxref=Genbank:WP_000954235.1;Name=WP_000954235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122498.1;locus_tag=STY7866_RS10705;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_000954235.1;transl_table=11
NZ_CAAR01000260.1	RefSeq	gene	1186	1677	.	-	.	ID=gene-STY7866_RS10710;Name=STY7866_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10710
NZ_CAAR01000260.1	Protein Homology	CDS	1186	1677	.	-	0	ID=cds-WP_010989273.1;Parent=gene-STY7866_RS10710;Dbxref=Genbank:WP_010989273.1;Name=WP_010989273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458321.1;locus_tag=STY7866_RS10710;product=hypothetical protein;protein_id=WP_010989273.1;transl_table=11
NZ_CAAR01000260.1	RefSeq	gene	1907	2560	.	+	.	ID=gene-STY7866_RS10715;Name=STY7866_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10715
NZ_CAAR01000260.1	Protein Homology	CDS	1907	2560	.	+	0	ID=cds-WP_000469191.1;Parent=gene-STY7866_RS10715;Dbxref=Genbank:WP_000469191.1;Name=WP_000469191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458322.1;locus_tag=STY7866_RS10715;product=lipoprotein;protein_id=WP_000469191.1;transl_table=11
NZ_CAAR01000260.1	RefSeq	gene	2723	4765	.	+	.	ID=gene-STY7866_RS10720;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=STY7866_RS10720
NZ_CAAR01000260.1	Protein Homology	CDS	2723	4765	.	+	0	ID=cds-WP_000184173.1;Parent=gene-STY7866_RS10720;Dbxref=Genbank:WP_000184173.1;Name=WP_000184173.1;gbkey=CDS;gene=prlC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458323.1;locus_tag=STY7866_RS10720;product=oligopeptidase A;protein_id=WP_000184173.1;transl_table=11
NZ_CAAR01000260.1	RefSeq	gene	4772	5530	.	+	.	ID=gene-STY7866_RS10725;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=STY7866_RS10725
NZ_CAAR01000260.1	Protein Homology	CDS	4772	5530	.	+	0	ID=cds-WP_001165126.1;Parent=gene-STY7866_RS10725;Dbxref=Genbank:WP_001165126.1;Name=WP_001165126.1;gbkey=CDS;gene=rsmJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458324.1;locus_tag=STY7866_RS10725;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_001165126.1;transl_table=11
NZ_CAAR01000260.1	RefSeq	gene	5622	7091	.	-	.	ID=gene-STY7866_RS10730;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=STY7866_RS10730
NZ_CAAR01000260.1	Protein Homology	CDS	5622	7091	.	-	0	ID=cds-WP_001098284.1;Parent=gene-STY7866_RS10730;Dbxref=Genbank:WP_001098284.1;Name=WP_001098284.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458325.1;locus_tag=STY7866_RS10730;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098284.1;transl_table=11
NZ_CAAR01000260.1	RefSeq	pseudogene	7416	7849	.	-	.	ID=gene-STY7866_RS10735;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=pseudogene;locus_tag=STY7866_RS10735;pseudo=true
NZ_CAAR01000260.1	Protein Homology	CDS	7416	7849	.	-	0	ID=cds-STY7866_RS10735;Parent=gene-STY7866_RS10735;Note=frameshifted;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001472469.1;locus_tag=STY7866_RS10735;product=universal stress protein UspA;pseudo=true;transl_table=11
NZ_CAAR01000260.1	RefSeq	gene	8237	8572	.	+	.	ID=gene-STY7866_RS10740;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=STY7866_RS10740
NZ_CAAR01000260.1	Protein Homology	CDS	8237	8572	.	+	0	ID=cds-WP_000626193.1;Parent=gene-STY7866_RS10740;Dbxref=Genbank:WP_000626193.1;Name=WP_000626193.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458327.1;locus_tag=STY7866_RS10740;product=universal stress protein UspB;protein_id=WP_000626193.1;transl_table=11
NZ_CAAR01000260.1	RefSeq	gene	8712	9625	.	-	.	ID=gene-STY7866_RS10745;Name=STY7866_RS10745;end_range=9625,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10745;partial=true
NZ_CAAR01000260.1	Protein Homology	CDS	8712	9625	.	-	2	ID=cds-WP_000363808.1;Parent=gene-STY7866_RS10745;Dbxref=Genbank:WP_000363808.1;Name=WP_000363808.1;end_range=9625,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458328.1;locus_tag=STY7866_RS10745;partial=true;product=inorganic phosphate transporter;protein_id=WP_000363808.1;transl_table=11
##sequence-region NZ_CAAR01000259.1 1 6270
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000259.1	RefSeq	region	1	6270	.	+	.	ID=NZ_CAAR01000259.1:1..6270;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000259.1	RefSeq	gene	79	141	.	+	.	ID=gene-STY7866_RS27200;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=STY7866_RS27200
NZ_CAAR01000259.1	Protein Homology	CDS	79	141	.	+	0	ID=cds-WP_096335044.1;Parent=gene-STY7866_RS27200;Dbxref=Genbank:WP_096335044.1;Name=WP_096335044.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=STY7866_RS27200;product=membrane protein YoeI;protein_id=WP_096335044.1;transl_table=11
NZ_CAAR01000259.1	RefSeq	gene	131	1489	.	+	.	ID=gene-STY7866_RS10685;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=STY7866_RS10685
NZ_CAAR01000259.1	Protein Homology	CDS	131	1489	.	+	0	ID=cds-WP_001519005.1;Parent=gene-STY7866_RS10685;Dbxref=Genbank:WP_001519005.1;Name=WP_001519005.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=STY7866_RS10685;product=putrescine/proton symporter PlaP;protein_id=WP_001519005.1;transl_table=11
NZ_CAAR01000259.1	RefSeq	gene	1625	3055	.	-	.	ID=gene-STY7866_RS10690;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=STY7866_RS10690
NZ_CAAR01000259.1	Protein Homology	CDS	1625	3055	.	-	0	ID=cds-WP_000216700.1;Parent=gene-STY7866_RS10690;Dbxref=Genbank:WP_000216700.1;Name=WP_000216700.1;gbkey=CDS;gene=sbcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456614.1;locus_tag=STY7866_RS10690;product=exodeoxyribonuclease I;protein_id=WP_000216700.1;transl_table=11
NZ_CAAR01000259.1	RefSeq	pseudogene	3422	5764	.	-	.	ID=gene-STY7866_RS10695;Name=STY7866_RS10695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10695;pseudo=true
NZ_CAAR01000259.1	Protein Homology	CDS	3422	5764	.	-	0	ID=cds-STY7866_RS10695;Parent=gene-STY7866_RS10695;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=STY7866_RS10695;product=type III secretion system effector HECT-type E3 ubiquitin transferase;pseudo=true;transl_table=11
NZ_CAAR01000259.1	RefSeq	pseudogene	6031	6123	.	+	.	ID=gene-STY7866_RS27205;Name=STY7866_RS27205;end_range=6123,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27205;partial=true;pseudo=true;start_range=.,6031
NZ_CAAR01000259.1	Protein Homology	CDS	6031	6123	.	+	0	ID=cds-STY7866_RS27205;Parent=gene-STY7866_RS27205;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=6123,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308979.1;locus_tag=STY7866_RS27205;partial=true;product=heavy metal-binding domain-containing protein;pseudo=true;start_range=.,6031;transl_table=11
##sequence-region NZ_CAAR01000258.1 1 20788
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000258.1	RefSeq	region	1	20788	.	+	.	ID=NZ_CAAR01000258.1:1..20788;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000258.1	RefSeq	gene	3020	5239	.	+	.	ID=gene-STY7866_RS10600;Name=STY7866_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10600
NZ_CAAR01000258.1	Protein Homology	CDS	3020	5239	.	+	0	ID=cds-WP_001764112.1;Parent=gene-STY7866_RS10600;Dbxref=Genbank:WP_001764112.1;Name=WP_001764112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764112.1;locus_tag=STY7866_RS10600;product=autotransporter domain-containing protein;protein_id=WP_001764112.1;transl_table=11
NZ_CAAR01000258.1	RefSeq	gene	5433	5603	.	+	.	ID=gene-STY7866_RS10605;Name=STY7866_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10605
NZ_CAAR01000258.1	Protein Homology	CDS	5433	5603	.	+	0	ID=cds-WP_000472323.1;Parent=gene-STY7866_RS10605;Dbxref=Genbank:WP_000472323.1;Name=WP_000472323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458424.1;locus_tag=STY7866_RS10605;product=YhfL family protein;protein_id=WP_000472323.1;transl_table=11
NZ_CAAR01000258.1	RefSeq	gene	5747	6751	.	-	.	ID=gene-STY7866_RS10610;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=STY7866_RS10610
NZ_CAAR01000258.1	Protein Homology	CDS	5747	6751	.	-	0	ID=cds-WP_000165562.1;Parent=gene-STY7866_RS10610;Dbxref=Genbank:WP_000165562.1;Name=WP_000165562.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458423.1;locus_tag=STY7866_RS10610;product=tryptophan--tRNA ligase;protein_id=WP_000165562.1;transl_table=11
NZ_CAAR01000258.1	RefSeq	gene	6744	7502	.	-	.	ID=gene-STY7866_RS10615;Name=STY7866_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10615
NZ_CAAR01000258.1	Protein Homology	CDS	6744	7502	.	-	0	ID=cds-WP_001038042.1;Parent=gene-STY7866_RS10615;Dbxref=Genbank:WP_001038042.1;Name=WP_001038042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458422.1;locus_tag=STY7866_RS10615;product=phosphoglycolate phosphatase;protein_id=WP_001038042.1;transl_table=11
NZ_CAAR01000258.1	RefSeq	gene	7495	8172	.	-	.	ID=gene-STY7866_RS10620;Name=STY7866_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10620
NZ_CAAR01000258.1	Protein Homology	CDS	7495	8172	.	-	0	ID=cds-WP_000816285.1;Parent=gene-STY7866_RS10620;Dbxref=Genbank:WP_000816285.1;Name=WP_000816285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458421.1;locus_tag=STY7866_RS10620;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816285.1;transl_table=11
NZ_CAAR01000258.1	RefSeq	gene	8190	9026	.	-	.	ID=gene-STY7866_RS10625;Name=STY7866_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10625
NZ_CAAR01000258.1	Protein Homology	CDS	8190	9026	.	-	0	ID=cds-WP_000742132.1;Parent=gene-STY7866_RS10625;Dbxref=Genbank:WP_000742132.1;Name=WP_000742132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458420.1;locus_tag=STY7866_RS10625;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742132.1;transl_table=11
NZ_CAAR01000258.1	RefSeq	gene	9207	10484	.	-	.	ID=gene-STY7866_RS10630;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=STY7866_RS10630
NZ_CAAR01000258.1	Protein Homology	CDS	9207	10484	.	-	0	ID=cds-WP_000343137.1;Parent=gene-STY7866_RS10630;Dbxref=Genbank:WP_000343137.1;Name=WP_000343137.1;gbkey=CDS;gene=damX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458419.1;locus_tag=STY7866_RS10630;product=cell division protein DamX;protein_id=WP_000343137.1;transl_table=11
NZ_CAAR01000258.1	RefSeq	pseudogene	10582	11671	.	-	.	ID=gene-STY7866_RS10635;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=pseudogene;locus_tag=STY7866_RS10635;pseudo=true
NZ_CAAR01000258.1	Protein Homology	CDS	10582	11671	.	-	0	ID=cds-STY7866_RS10635;Parent=gene-STY7866_RS10635;Note=frameshifted;gbkey=CDS;gene=aroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458418.1;locus_tag=STY7866_RS10635;product=3-dehydroquinate synthase;pseudo=true;transl_table=11
NZ_CAAR01000258.1	RefSeq	gene	11728	12249	.	-	.	ID=gene-STY7866_RS10640;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=STY7866_RS10640
NZ_CAAR01000258.1	Protein Homology	CDS	11728	12249	.	-	0	ID=cds-WP_000818621.1;Parent=gene-STY7866_RS10640;Dbxref=Genbank:WP_000818621.1;Name=WP_000818621.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=STY7866_RS10640;product=shikimate kinase AroK;protein_id=WP_000818621.1;transl_table=11
NZ_CAAR01000258.1	RefSeq	gene	12714	13952	.	-	.	ID=gene-STY7866_RS10645;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=STY7866_RS10645
NZ_CAAR01000258.1	Protein Homology	CDS	12714	13952	.	-	0	ID=cds-WP_000832818.1;Parent=gene-STY7866_RS10645;Dbxref=Genbank:WP_000832818.1;Name=WP_000832818.1;gbkey=CDS;gene=hofQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458416.1;locus_tag=STY7866_RS10645;product=DNA uptake porin HofQ;protein_id=WP_000832818.1;transl_table=11
NZ_CAAR01000258.1	RefSeq	gene	13867	14268	.	-	.	ID=gene-STY7866_RS10650;Name=STY7866_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10650
NZ_CAAR01000258.1	Protein Homology	CDS	13867	14268	.	-	0	ID=cds-WP_000868832.1;Parent=gene-STY7866_RS10650;Dbxref=Genbank:WP_000868832.1;Name=WP_000868832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458415.1;locus_tag=STY7866_RS10650;product=DUF2531 family protein;protein_id=WP_000868832.1;transl_table=11
NZ_CAAR01000258.1	RefSeq	gene	14258	14731	.	-	.	ID=gene-STY7866_RS10655;Name=STY7866_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10655
NZ_CAAR01000258.1	Protein Homology	CDS	14258	14731	.	-	0	ID=cds-WP_000992480.1;Parent=gene-STY7866_RS10655;Dbxref=Genbank:WP_000992480.1;Name=WP_000992480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458414.1;locus_tag=STY7866_RS10655;product=hypothetical protein;protein_id=WP_000992480.1;transl_table=11
NZ_CAAR01000258.1	RefSeq	gene	14715	15254	.	-	.	ID=gene-STY7866_RS10660;Name=STY7866_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10660
NZ_CAAR01000258.1	Protein Homology	CDS	14715	15254	.	-	0	ID=cds-WP_000951390.1;Parent=gene-STY7866_RS10660;Dbxref=Genbank:WP_000951390.1;Name=WP_000951390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458413.1;locus_tag=STY7866_RS10660;product=PilN domain-containing protein;protein_id=WP_000951390.1;transl_table=11
NZ_CAAR01000258.1	RefSeq	gene	15254	16033	.	-	.	ID=gene-STY7866_RS10665;Name=STY7866_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10665
NZ_CAAR01000258.1	Protein Homology	CDS	15254	16033	.	-	0	ID=cds-WP_000874746.1;Parent=gene-STY7866_RS10665;Dbxref=Genbank:WP_000874746.1;Name=WP_000874746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458412.1;locus_tag=STY7866_RS10665;product=hypothetical protein;protein_id=WP_000874746.1;transl_table=11
NZ_CAAR01000258.1	RefSeq	gene	16130	18706	.	+	.	ID=gene-STY7866_RS10670;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=STY7866_RS10670
NZ_CAAR01000258.1	Protein Homology	CDS	16130	18706	.	+	0	ID=cds-WP_021013215.1;Parent=gene-STY7866_RS10670;Dbxref=Genbank:WP_021013215.1;Name=WP_021013215.1;gbkey=CDS;gene=mrcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458411.3;locus_tag=STY7866_RS10670;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_021013215.1;transl_table=11
NZ_CAAR01000258.1	RefSeq	gene	18802	19398	.	-	.	ID=gene-STY7866_RS10675;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=STY7866_RS10675
NZ_CAAR01000258.1	Protein Homology	CDS	18802	19398	.	-	0	ID=cds-WP_001519362.1;Parent=gene-STY7866_RS10675;Dbxref=Genbank:WP_001519362.1;Name=WP_001519362.1;gbkey=CDS;gene=nudE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458410.3;locus_tag=STY7866_RS10675;product=ADP compounds hydrolase NudE;protein_id=WP_001519362.1;transl_table=11
NZ_CAAR01000258.1	RefSeq	pseudogene	19688	20788	.	+	.	ID=gene-STY7866_RS10680;Name=igaA;end_range=20788,.;gbkey=Gene;gene=igaA;gene_biotype=pseudogene;locus_tag=STY7866_RS10680;partial=true;pseudo=true
NZ_CAAR01000258.1	Protein Homology	CDS	19688	20788	.	+	0	ID=cds-STY7866_RS10680;Parent=gene-STY7866_RS10680;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=20788,.;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458409.1;locus_tag=STY7866_RS10680;partial=true;product=intracellular growth attenuator protein IgaA;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000257.1 1 10231
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000257.1	RefSeq	region	1	10231	.	+	.	ID=NZ_CAAR01000257.1:1..10231;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000257.1	RefSeq	gene	1	337	.	-	.	ID=gene-STY7866_RS26410;Name=STY7866_RS26410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26410;partial=true;start_range=.,1
NZ_CAAR01000257.1	Protein Homology	CDS	1	337	.	-	0	ID=cds-WP_151259998.1;Parent=gene-STY7866_RS26410;Dbxref=Genbank:WP_151259998.1;Name=WP_151259998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462381.1;locus_tag=STY7866_RS26410;partial=true;product=hypothetical protein;protein_id=WP_151259998.1;start_range=.,1;transl_table=11
NZ_CAAR01000257.1	RefSeq	gene	664	2037	.	-	.	ID=gene-STY7866_RS10545;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=STY7866_RS10545
NZ_CAAR01000257.1	Protein Homology	CDS	664	2037	.	-	0	ID=cds-WP_000349908.1;Parent=gene-STY7866_RS10545;Dbxref=Genbank:WP_000349908.1;Name=WP_000349908.1;gbkey=CDS;gene=cobA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458425.1;locus_tag=STY7866_RS10545;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000349908.1;transl_table=11
NZ_CAAR01000257.1	RefSeq	gene	2049	2858	.	-	.	ID=gene-STY7866_RS10550;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=STY7866_RS10550
NZ_CAAR01000257.1	Protein Homology	CDS	2049	2858	.	-	0	ID=cds-WP_000493575.1;Parent=gene-STY7866_RS10550;Dbxref=Genbank:WP_000493575.1;Name=WP_000493575.1;gbkey=CDS;gene=nirC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458426.1;locus_tag=STY7866_RS10550;product=nitrite transporter NirC;protein_id=WP_000493575.1;transl_table=11
NZ_CAAR01000257.1	RefSeq	gene	3040	3366	.	-	.	ID=gene-STY7866_RS10555;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=STY7866_RS10555
NZ_CAAR01000257.1	Protein Homology	CDS	3040	3366	.	-	0	ID=cds-WP_000084814.1;Parent=gene-STY7866_RS10555;Dbxref=Genbank:WP_000084814.1;Name=WP_000084814.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458427.1;locus_tag=STY7866_RS10555;product=nitrite reductase small subunit NirD;protein_id=WP_000084814.1;transl_table=11
NZ_CAAR01000257.1	RefSeq	gene	3363	5906	.	-	.	ID=gene-STY7866_RS10560;Name=STY7866_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10560
NZ_CAAR01000257.1	Protein Homology	CDS	3363	5906	.	-	0	ID=cds-WP_000049259.1;Parent=gene-STY7866_RS10560;Dbxref=Genbank:WP_000049259.1;Name=WP_000049259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458428.1;locus_tag=STY7866_RS10560;product=nitrite reductase large subunit;protein_id=WP_000049259.1;transl_table=11
NZ_CAAR01000257.1	RefSeq	gene	6223	7404	.	-	.	ID=gene-STY7866_RS10565;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=STY7866_RS10565
NZ_CAAR01000257.1	Protein Homology	CDS	6223	7404	.	-	0	ID=cds-WP_000185273.1;Parent=gene-STY7866_RS10565;Dbxref=Genbank:WP_000185273.1;Name=WP_000185273.1;gbkey=CDS;gene=tsgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458429.1;locus_tag=STY7866_RS10565;product=MFS transporter TsgA;protein_id=WP_000185273.1;transl_table=11
NZ_CAAR01000257.1	RefSeq	gene	7681	8253	.	+	.	ID=gene-STY7866_RS10570;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=STY7866_RS10570
NZ_CAAR01000257.1	Protein Homology	CDS	7681	8253	.	+	0	ID=cds-WP_000920482.1;Parent=gene-STY7866_RS10570;Dbxref=Genbank:WP_000920482.1;Name=WP_000920482.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920493.1;locus_tag=STY7866_RS10570;product=peptidylprolyl isomerase A;protein_id=WP_000920482.1;transl_table=11
NZ_CAAR01000257.1	RefSeq	gene	8362	8529	.	+	.	ID=gene-STY7866_RS10575;Name=STY7866_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10575
NZ_CAAR01000257.1	Protein Homology	CDS	8362	8529	.	+	0	ID=cds-WP_001519136.1;Parent=gene-STY7866_RS10575;Dbxref=Genbank:WP_001519136.1;Name=WP_001519136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458431.1;locus_tag=STY7866_RS10575;product=YhfG family protein;protein_id=WP_001519136.1;transl_table=11
NZ_CAAR01000257.1	RefSeq	gene	8519	9121	.	+	.	ID=gene-STY7866_RS10580;Name=STY7866_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10580
NZ_CAAR01000257.1	Protein Homology	CDS	8519	9121	.	+	0	ID=cds-WP_001280679.1;Parent=gene-STY7866_RS10580;Dbxref=Genbank:WP_001280679.1;Name=WP_001280679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458432.1;locus_tag=STY7866_RS10580;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280679.1;transl_table=11
NZ_CAAR01000257.1	RefSeq	gene	9153	9716	.	+	.	ID=gene-STY7866_RS10585;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=STY7866_RS10585
NZ_CAAR01000257.1	Protein Homology	CDS	9153	9716	.	+	0	ID=cds-WP_000601879.1;Parent=gene-STY7866_RS10585;Dbxref=Genbank:WP_000601879.1;Name=WP_000601879.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458433.1;locus_tag=STY7866_RS10585;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601879.1;transl_table=11
NZ_CAAR01000257.1	RefSeq	gene	9802	10231	.	+	.	ID=gene-STY7866_RS10590;Name=STY7866_RS10590;end_range=10231,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10590;partial=true
NZ_CAAR01000257.1	Protein Homology	CDS	9802	10231	.	+	0	ID=cds-WP_000190016.1;Parent=gene-STY7866_RS10590;Dbxref=Genbank:WP_000190016.1;Name=WP_000190016.1;end_range=10231,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458434.1;locus_tag=STY7866_RS10590;partial=true;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_000190016.1;transl_table=11
##sequence-region NZ_CAAR01000256.1 1 6604
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000256.1	RefSeq	region	1	6604	.	+	.	ID=NZ_CAAR01000256.1:1..6604;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000256.1	RefSeq	gene	1	1511	.	+	.	ID=gene-STY7866_RS10505;Name=STY7866_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10505;partial=true;start_range=.,1
NZ_CAAR01000256.1	Protein Homology	CDS	1	1511	.	+	2	ID=cds-WP_000326829.1;Parent=gene-STY7866_RS10505;Dbxref=Genbank:WP_000326829.1;Name=WP_000326829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454657.1;locus_tag=STY7866_RS10505;partial=true;product=class I tRNA ligase family protein;protein_id=WP_000326829.1;start_range=.,1;transl_table=11
NZ_CAAR01000256.1	RefSeq	gene	1511	2011	.	+	.	ID=gene-STY7866_RS10510;Name=STY7866_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10510
NZ_CAAR01000256.1	Protein Homology	CDS	1511	2011	.	+	0	ID=cds-WP_000042743.1;Parent=gene-STY7866_RS10510;Dbxref=Genbank:WP_000042743.1;Name=WP_000042743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454658.1;locus_tag=STY7866_RS10510;product=lipoprotein signal peptidase;protein_id=WP_000042743.1;transl_table=11
NZ_CAAR01000256.1	RefSeq	gene	2166	2615	.	+	.	ID=gene-STY7866_RS10515;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=STY7866_RS10515
NZ_CAAR01000256.1	Protein Homology	CDS	2166	2615	.	+	0	ID=cds-WP_000047269.1;Parent=gene-STY7866_RS10515;Dbxref=Genbank:WP_000047269.1;Name=WP_000047269.1;gbkey=CDS;gene=fkpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454659.1;locus_tag=STY7866_RS10515;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000047269.1;transl_table=11
NZ_CAAR01000256.1	RefSeq	gene	2618	3568	.	+	.	ID=gene-STY7866_RS10520;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=STY7866_RS10520
NZ_CAAR01000256.1	Protein Homology	CDS	2618	3568	.	+	0	ID=cds-WP_001166426.1;Parent=gene-STY7866_RS10520;Dbxref=Genbank:WP_001166426.1;Name=WP_001166426.1;gbkey=CDS;gene=ispH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=STY7866_RS10520;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166426.1;transl_table=11
NZ_CAAR01000256.1	RefSeq	gene	3768	4970	.	+	.	ID=gene-STY7866_RS10525;Name=STY7866_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10525
NZ_CAAR01000256.1	Protein Homology	CDS	3768	4970	.	+	0	ID=cds-WP_000516332.1;Parent=gene-STY7866_RS10525;Dbxref=Genbank:WP_000516332.1;Name=WP_000516332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454661.1;locus_tag=STY7866_RS10525;product=hypothetical protein;protein_id=WP_000516332.1;transl_table=11
NZ_CAAR01000256.1	RefSeq	gene	4986	5906	.	+	.	ID=gene-STY7866_RS10530;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=STY7866_RS10530
NZ_CAAR01000256.1	Protein Homology	CDS	4986	5906	.	+	0	ID=cds-WP_000127280.1;Parent=gene-STY7866_RS10530;Dbxref=Genbank:WP_000127280.1;Name=WP_000127280.1;gbkey=CDS;gene=rihC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454662.1;locus_tag=STY7866_RS10530;product=ribonucleoside hydrolase RihC;protein_id=WP_000127280.1;transl_table=11
NZ_CAAR01000256.1	RefSeq	gene	5928	6604	.	-	.	ID=gene-STY7866_RS10535;Name=STY7866_RS10535;end_range=6604,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10535;partial=true
NZ_CAAR01000256.1	Protein Homology	CDS	5928	6604	.	-	2	ID=cds-WP_000319482.1;Parent=gene-STY7866_RS10535;Dbxref=Genbank:WP_000319482.1;Name=WP_000319482.1;end_range=6604,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454663.1;locus_tag=STY7866_RS10535;partial=true;product=response regulator;protein_id=WP_000319482.1;transl_table=11
##sequence-region NZ_CAAR01000255.1 1 9467
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000255.1	RefSeq	region	1	9467	.	+	.	ID=NZ_CAAR01000255.1:1..9467;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000255.1	RefSeq	pseudogene	1	137	.	-	.	ID=gene-STY7866_RS27195;Name=STY7866_RS27195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27195;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000255.1	Protein Homology	CDS	1	137	.	-	0	ID=cds-STY7866_RS27195;Parent=gene-STY7866_RS27195;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001522746.1;locus_tag=STY7866_RS27195;partial=true;product=NADH oxidoreductase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000255.1	RefSeq	gene	149	1801	.	-	.	ID=gene-STY7866_RS10470;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=STY7866_RS10470
NZ_CAAR01000255.1	Protein Homology	CDS	149	1801	.	-	0	ID=cds-WP_000458773.1;Parent=gene-STY7866_RS10470;Dbxref=Genbank:WP_000458773.1;Name=WP_000458773.1;gbkey=CDS;gene=hcp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=STY7866_RS10470;product=hydroxylamine reductase;protein_id=WP_000458773.1;transl_table=11
NZ_CAAR01000255.1	RefSeq	gene	1945	2844	.	-	.	ID=gene-STY7866_RS10475;Name=STY7866_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10475
NZ_CAAR01000255.1	Protein Homology	CDS	1945	2844	.	-	0	ID=cds-WP_000491116.1;Parent=gene-STY7866_RS10475;Dbxref=Genbank:WP_000491116.1;Name=WP_000491116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455428.1;locus_tag=STY7866_RS10475;product=lysine exporter LysO family protein;protein_id=WP_000491116.1;transl_table=11
NZ_CAAR01000255.1	RefSeq	gene	3045	4703	.	+	.	ID=gene-STY7866_RS10480;Name=STY7866_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10480
NZ_CAAR01000255.1	Protein Homology	CDS	3045	4703	.	+	0	ID=cds-WP_000599771.1;Parent=gene-STY7866_RS10480;Dbxref=Genbank:WP_000599771.1;Name=WP_000599771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455429.1;locus_tag=STY7866_RS10480;product=ATP-dependent endonuclease;protein_id=WP_000599771.1;transl_table=11
NZ_CAAR01000255.1	RefSeq	gene	4700	5650	.	-	.	ID=gene-STY7866_RS10485;Name=STY7866_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10485
NZ_CAAR01000255.1	Protein Homology	CDS	4700	5650	.	-	0	ID=cds-WP_001682088.1;Parent=gene-STY7866_RS10485;Dbxref=Genbank:WP_001682088.1;Name=WP_001682088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455430.1;locus_tag=STY7866_RS10485;product=VirK/YbjX family protein;protein_id=WP_001682088.1;transl_table=11
NZ_CAAR01000255.1	RefSeq	gene	5864	6913	.	+	.	ID=gene-STY7866_RS10490;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=STY7866_RS10490
NZ_CAAR01000255.1	Protein Homology	CDS	5864	6913	.	+	0	ID=cds-WP_072079555.1;Parent=gene-STY7866_RS10490;Dbxref=Genbank:WP_072079555.1;Name=WP_072079555.1;gbkey=CDS;gene=macA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805581.1;locus_tag=STY7866_RS10490;product=macrolide transporter subunit MacA;protein_id=WP_072079555.1;transl_table=11
NZ_CAAR01000255.1	RefSeq	gene	6910	8856	.	+	.	ID=gene-STY7866_RS10495;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=STY7866_RS10495
NZ_CAAR01000255.1	Protein Homology	CDS	6910	8856	.	+	0	ID=cds-WP_000125880.1;Parent=gene-STY7866_RS10495;Dbxref=Genbank:WP_000125880.1;Name=WP_000125880.1;gbkey=CDS;gene=macB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455432.1;locus_tag=STY7866_RS10495;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_000125880.1;transl_table=11
NZ_CAAR01000255.1	RefSeq	gene	8986	9207	.	-	.	ID=gene-STY7866_RS10500;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=STY7866_RS10500
NZ_CAAR01000255.1	Protein Homology	CDS	8986	9207	.	-	0	ID=cds-WP_000447499.1;Parent=gene-STY7866_RS10500;Dbxref=Genbank:WP_000447499.1;Name=WP_000447499.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455433.1;locus_tag=STY7866_RS10500;product=cold shock-like protein CspD;protein_id=WP_000447499.1;transl_table=11
##sequence-region NZ_CAAR01000254.1 1 11493
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000254.1	RefSeq	region	1	11493	.	+	.	ID=NZ_CAAR01000254.1:1..11493;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000254.1	RefSeq	gene	1	1481	.	-	.	ID=gene-STY7866_RS10405;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=STY7866_RS10405;partial=true;start_range=.,1
NZ_CAAR01000254.1	Protein Homology	CDS	1	1481	.	-	0	ID=cds-WP_001764106.1;Parent=gene-STY7866_RS10405;Dbxref=Genbank:WP_001764106.1;Name=WP_001764106.1;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455290.1;locus_tag=STY7866_RS10405;partial=true;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_001764106.1;start_range=.,1;transl_table=11
NZ_CAAR01000254.1	RefSeq	gene	1481	1828	.	-	.	ID=gene-STY7866_RS10410;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=STY7866_RS10410
NZ_CAAR01000254.1	Protein Homology	CDS	1481	1828	.	-	0	ID=cds-WP_000254356.1;Parent=gene-STY7866_RS10410;Dbxref=Genbank:WP_000254356.1;Name=WP_000254356.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=STY7866_RS10410;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254356.1;transl_table=11
NZ_CAAR01000254.1	RefSeq	gene	1822	2211	.	-	.	ID=gene-STY7866_RS10415;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=STY7866_RS10415
NZ_CAAR01000254.1	Protein Homology	CDS	1822	2211	.	-	0	ID=cds-WP_001539490.1;Parent=gene-STY7866_RS10415;Dbxref=Genbank:WP_001539490.1;Name=WP_001539490.1;gbkey=CDS;gene=sdhC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455288.1;locus_tag=STY7866_RS10415;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_001539490.1;transl_table=11
NZ_CAAR01000254.1	RefSeq	gene	2966	4249	.	+	.	ID=gene-STY7866_RS10425;Name=STY7866_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10425
NZ_CAAR01000254.1	Protein Homology	CDS	2966	4249	.	+	0	ID=cds-WP_000785816.1;Parent=gene-STY7866_RS10425;Dbxref=Genbank:WP_000785816.1;Name=WP_000785816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455286.1;locus_tag=STY7866_RS10425;product=citrate synthase;protein_id=WP_000785816.1;transl_table=11
NZ_CAAR01000254.1	RefSeq	gene	4386	5432	.	+	.	ID=gene-STY7866_RS10430;Name=STY7866_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10430
NZ_CAAR01000254.1	Protein Homology	CDS	4386	5432	.	+	0	ID=cds-WP_001122050.1;Parent=gene-STY7866_RS10430;Dbxref=Genbank:WP_001122050.1;Name=WP_001122050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455285.1;locus_tag=STY7866_RS10430;product=AbrB family transcriptional regulator;protein_id=WP_001122050.1;transl_table=11
NZ_CAAR01000254.1	RefSeq	gene	5487	6278	.	-	.	ID=gene-STY7866_RS10435;Name=STY7866_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10435
NZ_CAAR01000254.1	Protein Homology	CDS	5487	6278	.	-	0	ID=cds-WP_001113965.1;Parent=gene-STY7866_RS10435;Dbxref=Genbank:WP_001113965.1;Name=WP_001113965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455284.1;locus_tag=STY7866_RS10435;product=endonuclease VIII;protein_id=WP_001113965.1;transl_table=11
NZ_CAAR01000254.1	RefSeq	gene	6312	6464	.	-	.	ID=gene-STY7866_RS10440;Name=STY7866_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10440
NZ_CAAR01000254.1	Protein Homology	CDS	6312	6464	.	-	0	ID=cds-WP_010989129.1;Parent=gene-STY7866_RS10440;Dbxref=Genbank:WP_010989129.1;Name=WP_010989129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528779.1;locus_tag=STY7866_RS10440;product=hypothetical protein;protein_id=WP_010989129.1;transl_table=11
NZ_CAAR01000254.1	RefSeq	pseudogene	6532	7954	.	-	.	ID=gene-STY7866_RS27190;Name=STY7866_RS27190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27190;pseudo=true
NZ_CAAR01000254.1	Protein Homology	CDS	6532	7954	.	-	0	ID=cds-STY7866_RS27190;Parent=gene-STY7866_RS27190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459711.1;locus_tag=STY7866_RS27190;product=glycosyl transferase;pseudo=true;transl_table=11
NZ_CAAR01000254.1	RefSeq	gene	8012	8845	.	-	.	ID=gene-STY7866_RS10450;Name=STY7866_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10450
NZ_CAAR01000254.1	Protein Homology	CDS	8012	8845	.	-	0	ID=cds-WP_001800477.1;Parent=gene-STY7866_RS10450;Dbxref=Genbank:WP_001800477.1;Name=WP_001800477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455282.1;locus_tag=STY7866_RS10450;product=glycosyltransferase family 2 protein;protein_id=WP_001800477.1;transl_table=11
NZ_CAAR01000254.1	RefSeq	pseudogene	9038	10822	.	-	.	ID=gene-STY7866_RS10455;Name=STY7866_RS10455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10455;pseudo=true
NZ_CAAR01000254.1	Protein Homology	CDS	9038	10822	.	-	0	ID=cds-STY7866_RS10455;Parent=gene-STY7866_RS10455;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459709.1;locus_tag=STY7866_RS10455;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11
NZ_CAAR01000254.1	RefSeq	gene	10916	11493	.	-	.	ID=gene-STY7866_RS10460;Name=STY7866_RS10460;end_range=11493,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10460;partial=true
NZ_CAAR01000254.1	Protein Homology	CDS	10916	11493	.	-	2	ID=cds-WP_000330374.1;Parent=gene-STY7866_RS10460;Dbxref=Genbank:WP_000330374.1;Name=WP_000330374.1;end_range=11493,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455281.1;locus_tag=STY7866_RS10460;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_000330374.1;transl_table=11
##sequence-region NZ_CAAR01000253.1 1 4026
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000253.1	RefSeq	region	1	4026	.	+	.	ID=NZ_CAAR01000253.1:1..4026;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000253.1	RefSeq	gene	41	256	.	-	.	ID=gene-STY7866_RS10380;Name=STY7866_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10380
NZ_CAAR01000253.1	Protein Homology	CDS	41	256	.	-	0	ID=cds-WP_000359982.1;Parent=gene-STY7866_RS10380;Dbxref=Genbank:WP_000359982.1;Name=WP_000359982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466138.1;locus_tag=STY7866_RS10380;product=hypothetical protein;protein_id=WP_000359982.1;transl_table=11
NZ_CAAR01000253.1	RefSeq	gene	710	1054	.	+	.	ID=gene-STY7866_RS10390;Name=STY7866_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10390
NZ_CAAR01000253.1	Protein Homology	CDS	710	1054	.	+	0	ID=cds-WP_031624270.1;Parent=gene-STY7866_RS10390;Dbxref=Genbank:WP_031624270.1;Name=WP_031624270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=STY7866_RS10390;product=hypothetical protein;protein_id=WP_031624270.1;transl_table=11
NZ_CAAR01000253.1	RefSeq	pseudogene	1060	1382	.	-	.	ID=gene-STY7866_RS10395;Name=STY7866_RS10395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10395;pseudo=true
NZ_CAAR01000253.1	Protein Homology	CDS	1060	1382	.	-	0	ID=cds-STY7866_RS10395;Parent=gene-STY7866_RS10395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463024.1;locus_tag=STY7866_RS10395;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000253.1	RefSeq	pseudogene	1424	4026	.	-	.	ID=gene-STY7866_RS10400;Name=STY7866_RS10400;end_range=4026,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10400;partial=true;pseudo=true
NZ_CAAR01000253.1	Protein Homology	CDS	1424	4026	.	-	2	ID=cds-STY7866_RS10400;Parent=gene-STY7866_RS10400;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4026,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457916.1;locus_tag=STY7866_RS10400;partial=true;product=DNA-directed RNA polymerase subunit beta';pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000252.1 1 16327
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000252.1	RefSeq	region	1	16327	.	+	.	ID=NZ_CAAR01000252.1:1..16327;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000252.1	RefSeq	gene	1	620	.	+	.	ID=gene-STY7866_RS10285;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=STY7866_RS10285;partial=true;start_range=.,1
NZ_CAAR01000252.1	Protein Homology	CDS	1	620	.	+	2	ID=cds-WP_000652735.1;Parent=gene-STY7866_RS10285;Dbxref=Genbank:WP_000652735.1;Name=WP_000652735.1;gbkey=CDS;gene=treR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458873.1;locus_tag=STY7866_RS10285;partial=true;product=HTH-type transcriptional regulator TreR;protein_id=WP_000652735.1;start_range=.,1;transl_table=11
NZ_CAAR01000252.1	RefSeq	gene	758	2176	.	+	.	ID=gene-STY7866_RS10290;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=STY7866_RS10290
NZ_CAAR01000252.1	Protein Homology	CDS	758	2176	.	+	0	ID=cds-WP_000048823.1;Parent=gene-STY7866_RS10290;Dbxref=Genbank:WP_000048823.1;Name=WP_000048823.1;gbkey=CDS;gene=treB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458872.1;locus_tag=STY7866_RS10290;product=PTS trehalose transporter subunit IIBC;protein_id=WP_000048823.1;transl_table=11
NZ_CAAR01000252.1	RefSeq	gene	2226	3878	.	+	.	ID=gene-STY7866_RS10295;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=STY7866_RS10295
NZ_CAAR01000252.1	Protein Homology	CDS	2226	3878	.	+	0	ID=cds-WP_000155051.1;Parent=gene-STY7866_RS10295;Dbxref=Genbank:WP_000155051.1;Name=WP_000155051.1;gbkey=CDS;gene=treC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458871.1;locus_tag=STY7866_RS10295;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_000155051.1;transl_table=11
NZ_CAAR01000252.1	RefSeq	gene	4287	6425	.	+	.	ID=gene-STY7866_RS10305;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=STY7866_RS10305
NZ_CAAR01000252.1	Protein Homology	CDS	4287	6425	.	+	0	ID=cds-WP_000187820.1;Parent=gene-STY7866_RS10305;Dbxref=Genbank:WP_000187820.1;Name=WP_000187820.1;gbkey=CDS;gene=nrdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004128226.1;locus_tag=STY7866_RS10305;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187820.1;transl_table=11
NZ_CAAR01000252.1	RefSeq	gene	6546	7010	.	+	.	ID=gene-STY7866_RS10310;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=STY7866_RS10310
NZ_CAAR01000252.1	Protein Homology	CDS	6546	7010	.	+	0	ID=cds-WP_001268860.1;Parent=gene-STY7866_RS10310;Dbxref=Genbank:WP_001268860.1;Name=WP_001268860.1;gbkey=CDS;gene=nrdG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458868.1;locus_tag=STY7866_RS10310;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001268860.1;transl_table=11
NZ_CAAR01000252.1	RefSeq	gene	7014	7298	.	-	.	ID=gene-STY7866_RS10315;Name=STY7866_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10315
NZ_CAAR01000252.1	Protein Homology	CDS	7014	7298	.	-	0	ID=cds-WP_000220578.1;Parent=gene-STY7866_RS10315;Dbxref=Genbank:WP_000220578.1;Name=WP_000220578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458867.1;locus_tag=STY7866_RS10315;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000220578.1;transl_table=11
NZ_CAAR01000252.1	RefSeq	gene	7288	7530	.	-	.	ID=gene-STY7866_RS10320;Name=STY7866_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10320
NZ_CAAR01000252.1	Protein Homology	CDS	7288	7530	.	-	0	ID=cds-WP_000212724.1;Parent=gene-STY7866_RS10320;Dbxref=Genbank:WP_000212724.1;Name=WP_000212724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458866.1;locus_tag=STY7866_RS10320;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000212724.1;transl_table=11
NZ_CAAR01000252.1	RefSeq	gene	7608	9437	.	-	.	ID=gene-STY7866_RS26405;Name=STY7866_RS26405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26405
NZ_CAAR01000252.1	Protein Homology	CDS	7608	9437	.	-	0	ID=cds-WP_000779261.1;Parent=gene-STY7866_RS26405;Dbxref=Genbank:WP_000779261.1;Name=WP_000779261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458864.1;locus_tag=STY7866_RS26405;product=oxo-acid lyase;protein_id=WP_000779261.1;transl_table=11
NZ_CAAR01000252.1	RefSeq	gene	9434	10552	.	-	.	ID=gene-STY7866_RS10335;Name=STY7866_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10335
NZ_CAAR01000252.1	Protein Homology	CDS	9434	10552	.	-	0	ID=cds-WP_001139189.1;Parent=gene-STY7866_RS10335;Dbxref=Genbank:WP_001139189.1;Name=WP_001139189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458863.1;locus_tag=STY7866_RS10335;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_001139189.1;transl_table=11
NZ_CAAR01000252.1	RefSeq	gene	10536	11669	.	-	.	ID=gene-STY7866_RS10340;Name=STY7866_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10340
NZ_CAAR01000252.1	Protein Homology	CDS	10536	11669	.	-	0	ID=cds-WP_000459938.1;Parent=gene-STY7866_RS10340;Dbxref=Genbank:WP_000459938.1;Name=WP_000459938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458862.1;locus_tag=STY7866_RS10340;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_000459938.1;transl_table=11
NZ_CAAR01000252.1	RefSeq	gene	11728	12372	.	-	.	ID=gene-STY7866_RS10345;Name=STY7866_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10345
NZ_CAAR01000252.1	Protein Homology	CDS	11728	12372	.	-	0	ID=cds-WP_000392132.1;Parent=gene-STY7866_RS10345;Dbxref=Genbank:WP_000392132.1;Name=WP_000392132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458861.1;locus_tag=STY7866_RS10345;product=DUF4310 family protein;protein_id=WP_000392132.1;transl_table=11
NZ_CAAR01000252.1	RefSeq	gene	12384	13160	.	-	.	ID=gene-STY7866_RS10350;Name=STY7866_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10350
NZ_CAAR01000252.1	Protein Homology	CDS	12384	13160	.	-	0	ID=cds-WP_000478578.1;Parent=gene-STY7866_RS10350;Dbxref=Genbank:WP_000478578.1;Name=WP_000478578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458860.1;locus_tag=STY7866_RS10350;product=DUF4311 domain-containing protein;protein_id=WP_000478578.1;transl_table=11
NZ_CAAR01000252.1	RefSeq	gene	13183	13485	.	-	.	ID=gene-STY7866_RS10355;Name=STY7866_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10355
NZ_CAAR01000252.1	Protein Homology	CDS	13183	13485	.	-	0	ID=cds-WP_000975186.1;Parent=gene-STY7866_RS10355;Dbxref=Genbank:WP_000975186.1;Name=WP_000975186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458859.1;locus_tag=STY7866_RS10355;product=DUF4312 family protein;protein_id=WP_000975186.1;transl_table=11
NZ_CAAR01000252.1	RefSeq	gene	13485	13847	.	-	.	ID=gene-STY7866_RS10360;Name=STY7866_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10360
NZ_CAAR01000252.1	Protein Homology	CDS	13485	13847	.	-	0	ID=cds-WP_000435389.1;Parent=gene-STY7866_RS10360;Dbxref=Genbank:WP_000435389.1;Name=WP_000435389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458858.1;locus_tag=STY7866_RS10360;product=hypothetical protein;protein_id=WP_000435389.1;transl_table=11
NZ_CAAR01000252.1	RefSeq	gene	13858	14196	.	-	.	ID=gene-STY7866_RS10365;Name=STY7866_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10365
NZ_CAAR01000252.1	Protein Homology	CDS	13858	14196	.	-	0	ID=cds-WP_001255103.1;Parent=gene-STY7866_RS10365;Dbxref=Genbank:WP_001255103.1;Name=WP_001255103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458857.1;locus_tag=STY7866_RS10365;product=glycine dehydrogenase;protein_id=WP_001255103.1;transl_table=11
NZ_CAAR01000252.1	RefSeq	gene	14221	14463	.	-	.	ID=gene-STY7866_RS27185;Name=STY7866_RS27185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27185
NZ_CAAR01000252.1	Protein Homology	CDS	14221	14463	.	-	0	ID=cds-WP_071525137.1;Parent=gene-STY7866_RS27185;Dbxref=Genbank:WP_071525137.1;Name=WP_071525137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007871070.1;locus_tag=STY7866_RS27185;product=hypothetical protein;protein_id=WP_071525137.1;transl_table=11
NZ_CAAR01000252.1	RefSeq	gene	14474	14860	.	-	.	ID=gene-STY7866_RS10370;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=STY7866_RS10370
NZ_CAAR01000252.1	Protein Homology	CDS	14474	14860	.	-	0	ID=cds-WP_001232231.1;Parent=gene-STY7866_RS10370;Dbxref=Genbank:WP_001232231.1;Name=WP_001232231.1;gbkey=CDS;gene=cybC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458856.1;locus_tag=STY7866_RS10370;product=cytochrome b562;protein_id=WP_001232231.1;transl_table=11
NZ_CAAR01000252.1	RefSeq	gene	14958	16310	.	-	.	ID=gene-STY7866_RS10375;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=STY7866_RS10375
NZ_CAAR01000252.1	Protein Homology	CDS	14958	16310	.	-	0	ID=cds-WP_000852994.1;Parent=gene-STY7866_RS10375;Dbxref=Genbank:WP_000852994.1;Name=WP_000852994.1;gbkey=CDS;gene=pmbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458855.1;locus_tag=STY7866_RS10375;product=metalloprotease PmbA;protein_id=WP_000852994.1;transl_table=11
##sequence-region NZ_CAAR01000251.1 1 4208
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000251.1	RefSeq	region	1	4208	.	+	.	ID=NZ_CAAR01000251.1:1..4208;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000251.1	RefSeq	pseudogene	1	286	.	+	.	ID=gene-STY7866_RS10270;Name=STY7866_RS10270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10270;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000251.1	Protein Homology	CDS	1	286	.	+	1	ID=cds-STY7866_RS10270;Parent=gene-STY7866_RS10270;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455290.1;locus_tag=STY7866_RS10270;partial=true;product=succinate dehydrogenase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000251.1	RefSeq	gene	303	1019	.	+	.	ID=gene-STY7866_RS10275;Name=STY7866_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10275
NZ_CAAR01000251.1	Protein Homology	CDS	303	1019	.	+	0	ID=cds-WP_001764104.1;Parent=gene-STY7866_RS10275;Dbxref=Genbank:WP_001764104.1;Name=WP_001764104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=STY7866_RS10275;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_001764104.1;transl_table=11
NZ_CAAR01000251.1	RefSeq	gene	1545	4208	.	+	.	ID=gene-STY7866_RS10280;Name=sucA;end_range=4208,.;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=STY7866_RS10280;partial=true
NZ_CAAR01000251.1	Protein Homology	CDS	1545	4208	.	+	0	ID=cds-WP_001181499.1;Parent=gene-STY7866_RS10280;Dbxref=Genbank:WP_001181499.1;Name=WP_001181499.1;end_range=4208,.;gbkey=CDS;gene=sucA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455292.1;locus_tag=STY7866_RS10280;partial=true;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181499.1;transl_table=11
##sequence-region NZ_CAAR01000250.1 1 4190
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000250.1	RefSeq	region	1	4190	.	+	.	ID=NZ_CAAR01000250.1:1..4190;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000250.1	RefSeq	pseudogene	1	175	.	+	.	ID=gene-STY7866_RS27180;Name=STY7866_RS27180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27180;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000250.1	Protein Homology	CDS	1	175	.	+	1	ID=cds-STY7866_RS27180;Parent=gene-STY7866_RS27180;Note=catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=STY7866_RS27180;partial=true;product=isovaleryl-CoA dehydrogenase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000250.1	RefSeq	gene	220	495	.	-	.	ID=gene-STY7866_RS10245;Name=STY7866_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10245
NZ_CAAR01000250.1	Protein Homology	CDS	220	495	.	-	0	ID=cds-WP_001681845.1;Parent=gene-STY7866_RS10245;Dbxref=Genbank:WP_001681845.1;Name=WP_001681845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=STY7866_RS10245;product=DUF1471 domain-containing protein;protein_id=WP_001681845.1;transl_table=11
NZ_CAAR01000250.1	RefSeq	gene	626	955	.	-	.	ID=gene-STY7866_RS10250;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=STY7866_RS10250
NZ_CAAR01000250.1	Protein Homology	CDS	626	955	.	-	0	ID=cds-WP_000586831.1;Parent=gene-STY7866_RS10250;Dbxref=Genbank:WP_000586831.1;Name=WP_000586831.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458813.1;locus_tag=STY7866_RS10250;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000586831.1;transl_table=11
NZ_CAAR01000250.1	RefSeq	gene	1139	1888	.	+	.	ID=gene-STY7866_RS10255;Name=STY7866_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10255
NZ_CAAR01000250.1	Protein Homology	CDS	1139	1888	.	+	0	ID=cds-WP_000560304.1;Parent=gene-STY7866_RS10255;Dbxref=Genbank:WP_000560304.1;Name=WP_000560304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458814.1;locus_tag=STY7866_RS10255;product=esterase;protein_id=WP_000560304.1;transl_table=11
NZ_CAAR01000250.1	RefSeq	gene	1885	2640	.	-	.	ID=gene-STY7866_RS10260;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=STY7866_RS10260
NZ_CAAR01000250.1	Protein Homology	CDS	1885	2640	.	-	0	ID=cds-WP_000133618.1;Parent=gene-STY7866_RS10260;Dbxref=Genbank:WP_000133618.1;Name=WP_000133618.1;gbkey=CDS;gene=ulaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458815.1;locus_tag=STY7866_RS10260;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133618.1;transl_table=11
NZ_CAAR01000250.1	RefSeq	gene	2745	3809	.	-	.	ID=gene-STY7866_RS10265;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=STY7866_RS10265
NZ_CAAR01000250.1	Protein Homology	CDS	2745	3809	.	-	0	ID=cds-WP_000049161.1;Parent=gene-STY7866_RS10265;Dbxref=Genbank:WP_000049161.1;Name=WP_000049161.1;gbkey=CDS;gene=ulaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=STY7866_RS10265;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_000049161.1;transl_table=11
##sequence-region NZ_CAAR01000249.1 1 7252
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000249.1	RefSeq	region	1	7252	.	+	.	ID=NZ_CAAR01000249.1:1..7252;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000249.1	RefSeq	pseudogene	1	76	.	-	.	ID=gene-STY7866_RS27170;Name=STY7866_RS27170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27170;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000249.1	Protein Homology	CDS	1	76	.	-	0	ID=cds-STY7866_RS27170;Parent=gene-STY7866_RS27170;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455799.1;locus_tag=STY7866_RS27170;partial=true;product=EAL domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000249.1	RefSeq	gene	297	482	.	+	.	ID=gene-STY7866_RS27175;Name=STY7866_RS27175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27175
NZ_CAAR01000249.1	Protein Homology	CDS	297	482	.	+	0	ID=cds-WP_071525148.1;Parent=gene-STY7866_RS27175;Dbxref=Genbank:WP_071525148.1;Name=WP_071525148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344074.1;locus_tag=STY7866_RS27175;product=hypothetical protein;protein_id=WP_071525148.1;transl_table=11
NZ_CAAR01000249.1	RefSeq	gene	559	1941	.	-	.	ID=gene-STY7866_RS10205;Name=STY7866_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10205
NZ_CAAR01000249.1	Protein Homology	CDS	559	1941	.	-	0	ID=cds-WP_001116915.1;Parent=gene-STY7866_RS10205;Dbxref=Genbank:WP_001116915.1;Name=WP_001116915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455798.1;locus_tag=STY7866_RS10205;product=hypothetical protein;protein_id=WP_001116915.1;transl_table=11
NZ_CAAR01000249.1	RefSeq	gene	1976	2155	.	+	.	ID=gene-STY7866_RS10210;Name=STY7866_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10210
NZ_CAAR01000249.1	Protein Homology	CDS	1976	2155	.	+	0	ID=cds-WP_031624296.1;Parent=gene-STY7866_RS10210;Dbxref=Genbank:WP_031624296.1;Name=WP_031624296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=STY7866_RS10210;product=hypothetical protein;protein_id=WP_031624296.1;transl_table=11
NZ_CAAR01000249.1	RefSeq	gene	2130	2429	.	+	.	ID=gene-STY7866_RS10215;Name=STY7866_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10215
NZ_CAAR01000249.1	Protein Homology	CDS	2130	2429	.	+	0	ID=cds-WP_031610532.1;Parent=gene-STY7866_RS10215;Dbxref=Genbank:WP_031610532.1;Name=WP_031610532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=STY7866_RS10215;product=hypothetical protein;protein_id=WP_031610532.1;transl_table=11
NZ_CAAR01000249.1	RefSeq	gene	2547	3335	.	+	.	ID=gene-STY7866_RS10220;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=STY7866_RS10220
NZ_CAAR01000249.1	Protein Homology	CDS	2547	3335	.	+	0	ID=cds-WP_000506501.1;Parent=gene-STY7866_RS10220;Dbxref=Genbank:WP_000506501.1;Name=WP_000506501.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=STY7866_RS10220;product=enoyl-ACP reductase FabI;protein_id=WP_000506501.1;transl_table=11
NZ_CAAR01000249.1	RefSeq	gene	3535	4455	.	+	.	ID=gene-STY7866_RS10225;Name=STY7866_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10225
NZ_CAAR01000249.1	Protein Homology	CDS	3535	4455	.	+	0	ID=cds-WP_000434186.1;Parent=gene-STY7866_RS10225;Dbxref=Genbank:WP_000434186.1;Name=WP_000434186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=STY7866_RS10225;product=hypothetical protein;protein_id=WP_000434186.1;transl_table=11
NZ_CAAR01000249.1	RefSeq	gene	4757	6691	.	+	.	ID=gene-STY7866_RS10230;Name=STY7866_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10230
NZ_CAAR01000249.1	Protein Homology	CDS	4757	6691	.	+	0	ID=cds-WP_000485046.1;Parent=gene-STY7866_RS10230;Dbxref=Genbank:WP_000485046.1;Name=WP_000485046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455795.1;locus_tag=STY7866_RS10230;product=exoribonuclease II;protein_id=WP_000485046.1;transl_table=11
NZ_CAAR01000249.1	RefSeq	pseudogene	6953	7252	.	+	.	ID=gene-STY7866_RS26400;Name=STY7866_RS26400;end_range=7252,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26400;partial=true;pseudo=true
NZ_CAAR01000249.1	Protein Homology	CDS	6953	7252	.	+	0	ID=cds-STY7866_RS26400;Parent=gene-STY7866_RS26400;Note=c-di-GMP phosphodiesterase%3B probably degrades signalling molecule c-di-GMP%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7252,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455794.1;locus_tag=STY7866_RS26400;partial=true;product=cyclic di-GMP phosphodiesterase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000248.1 1 13702
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000248.1	RefSeq	region	1	13702	.	+	.	ID=NZ_CAAR01000248.1:1..13702;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000248.1	RefSeq	pseudogene	1	252	.	-	.	ID=gene-STY7866_RS10135;Name=STY7866_RS10135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10135;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000248.1	Protein Homology	CDS	1	252	.	-	0	ID=cds-STY7866_RS10135;Parent=gene-STY7866_RS10135;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456945.1;locus_tag=STY7866_RS10135;partial=true;product=alanine transaminase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000248.1	RefSeq	gene	976	1941	.	-	.	ID=gene-STY7866_RS10140;Name=STY7866_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10140
NZ_CAAR01000248.1	Protein Homology	CDS	976	1941	.	-	0	ID=cds-WP_000170371.1;Parent=gene-STY7866_RS10140;Dbxref=Genbank:WP_000170371.1;Name=WP_000170371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456946.1;locus_tag=STY7866_RS10140;product=glucokinase;protein_id=WP_000170371.1;transl_table=11
NZ_CAAR01000248.1	RefSeq	gene	2145	3380	.	+	.	ID=gene-STY7866_RS10145;Name=STY7866_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10145
NZ_CAAR01000248.1	Protein Homology	CDS	2145	3380	.	+	0	ID=cds-WP_000468932.1;Parent=gene-STY7866_RS10145;Dbxref=Genbank:WP_000468932.1;Name=WP_000468932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456947.1;locus_tag=STY7866_RS10145;product=ion channel protein;protein_id=WP_000468932.1;transl_table=11
NZ_CAAR01000248.1	RefSeq	pseudogene	3400	5051	.	-	.	ID=gene-STY7866_RS10150;Name=STY7866_RS10150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10150;pseudo=true
NZ_CAAR01000248.1	Protein Homology	CDS	3400	5051	.	-	0	ID=cds-STY7866_RS10150;Parent=gene-STY7866_RS10150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456948.1;locus_tag=STY7866_RS10150;product=alpha-keto acid decarboxylase family protein;pseudo=true;transl_table=11
NZ_CAAR01000248.1	RefSeq	gene	5231	6229	.	+	.	ID=gene-STY7866_RS10155;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=STY7866_RS10155
NZ_CAAR01000248.1	Protein Homology	CDS	5231	6229	.	+	0	ID=cds-WP_000640297.1;Parent=gene-STY7866_RS10155;Dbxref=Genbank:WP_000640297.1;Name=WP_000640297.1;gbkey=CDS;gene=mgrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456949.1;locus_tag=STY7866_RS10155;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_000640297.1;transl_table=11
NZ_CAAR01000248.1	RefSeq	gene	6343	6669	.	+	.	ID=gene-STY7866_RS10160;Name=STY7866_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10160
NZ_CAAR01000248.1	Protein Homology	CDS	6343	6669	.	+	0	ID=cds-WP_000490091.1;Parent=gene-STY7866_RS10160;Dbxref=Genbank:WP_000490091.1;Name=WP_000490091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456950.1;locus_tag=STY7866_RS10160;product=DUF2502 domain-containing protein;protein_id=WP_000490091.1;transl_table=11
NZ_CAAR01000248.1	RefSeq	gene	6730	7971	.	-	.	ID=gene-STY7866_RS10165;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;locus_tag=STY7866_RS10165
NZ_CAAR01000248.1	Protein Homology	CDS	6730	7971	.	-	0	ID=cds-WP_000131734.1;Parent=gene-STY7866_RS10165;Dbxref=Genbank:WP_000131734.1;Name=WP_000131734.1;gbkey=CDS;gene=mntH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456951.1;locus_tag=STY7866_RS10165;product=Mn(2+) uptake NRAMP transporter MntH;protein_id=WP_000131734.1;transl_table=11
NZ_CAAR01000248.1	RefSeq	gene	8314	9516	.	+	.	ID=gene-STY7866_RS10170;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=STY7866_RS10170
NZ_CAAR01000248.1	Protein Homology	CDS	8314	9516	.	+	0	ID=cds-WP_000376341.1;Parent=gene-STY7866_RS10170;Dbxref=Genbank:WP_000376341.1;Name=WP_000376341.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456952.1;locus_tag=STY7866_RS10170;product=nucleoside permease NupC;protein_id=WP_000376341.1;transl_table=11
NZ_CAAR01000248.1	RefSeq	gene	9569	11758	.	-	.	ID=gene-STY7866_RS10175;Name=STY7866_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10175
NZ_CAAR01000248.1	Protein Homology	CDS	9569	11758	.	-	0	ID=cds-WP_001112949.1;Parent=gene-STY7866_RS10175;Dbxref=Genbank:WP_001112949.1;Name=WP_001112949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456953.1;locus_tag=STY7866_RS10175;product=sensor domain-containing phosphodiesterase;protein_id=WP_001112949.1;transl_table=11
NZ_CAAR01000248.1	RefSeq	gene	11949	12024	.	-	.	ID=gene-STY7866_RS10180;Name=STY7866_RS10180;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS10180
NZ_CAAR01000248.1	tRNAscan-SE	tRNA	11949	12024	.	-	.	ID=rna-STY7866_RS10180;Parent=gene-STY7866_RS10180;anticodon=(pos:complement(11989..11991));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS10180;product=tRNA-Ala
NZ_CAAR01000248.1	tRNAscan-SE	exon	11949	12024	.	-	.	ID=exon-STY7866_RS10180-1;Parent=rna-STY7866_RS10180;anticodon=(pos:complement(11989..11991));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS10180;product=tRNA-Ala
NZ_CAAR01000248.1	RefSeq	gene	12067	12142	.	-	.	ID=gene-STY7866_RS10185;Name=STY7866_RS10185;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS10185
NZ_CAAR01000248.1	tRNAscan-SE	tRNA	12067	12142	.	-	.	ID=rna-STY7866_RS10185;Parent=gene-STY7866_RS10185;anticodon=(pos:complement(12107..12109));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS10185;product=tRNA-Ala
NZ_CAAR01000248.1	tRNAscan-SE	exon	12067	12142	.	-	.	ID=exon-STY7866_RS10185-1;Parent=rna-STY7866_RS10185;anticodon=(pos:complement(12107..12109));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS10185;product=tRNA-Ala
NZ_CAAR01000248.1	RefSeq	gene	12364	12726	.	+	.	ID=gene-STY7866_RS10190;Name=STY7866_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10190
NZ_CAAR01000248.1	Protein Homology	CDS	12364	12726	.	+	0	ID=cds-WP_000472034.1;Parent=gene-STY7866_RS10190;Dbxref=Genbank:WP_000472034.1;Name=WP_000472034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456954.1;locus_tag=STY7866_RS10190;product=putative DNA-binding transcriptional regulator;protein_id=WP_000472034.1;transl_table=11
NZ_CAAR01000248.1	RefSeq	gene	12728	13120	.	+	.	ID=gene-STY7866_RS10195;Name=STY7866_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10195
NZ_CAAR01000248.1	Protein Homology	CDS	12728	13120	.	+	0	ID=cds-WP_000826515.1;Parent=gene-STY7866_RS10195;Dbxref=Genbank:WP_000826515.1;Name=WP_000826515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456955.1;locus_tag=STY7866_RS10195;product=putative DNA-binding transcriptional regulator;protein_id=WP_000826515.1;transl_table=11
NZ_CAAR01000248.1	RefSeq	pseudogene	13174	13702	.	-	.	ID=gene-STY7866_RS10200;Name=gltX;end_range=13702,.;gbkey=Gene;gene=gltX;gene_biotype=pseudogene;locus_tag=STY7866_RS10200;partial=true;pseudo=true
NZ_CAAR01000248.1	Protein Homology	CDS	13174	13702	.	-	1	ID=cds-STY7866_RS10200;Parent=gene-STY7866_RS10200;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=13702,.;gbkey=CDS;gene=gltX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695624.1;locus_tag=STY7866_RS10200;partial=true;product=glutamate--tRNA ligase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000247.1 1 5755
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000247.1	RefSeq	region	1	5755	.	+	.	ID=NZ_CAAR01000247.1:1..5755;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000247.1	RefSeq	pseudogene	1	821	.	+	.	ID=gene-STY7866_RS10115;Name=STY7866_RS10115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10115;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000247.1	Protein Homology	CDS	1	821	.	+	2	ID=cds-STY7866_RS10115;Parent=gene-STY7866_RS10115;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458378.1;locus_tag=STY7866_RS10115;partial=true;product=gluconate transporter;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000247.1	RefSeq	pseudogene	744	1118	.	-	.	ID=gene-STY7866_RS27165;Name=STY7866_RS27165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27165;partial=true;pseudo=true;start_range=.,744
NZ_CAAR01000247.1	Protein Homology	CDS	744	1118	.	-	0	ID=cds-STY7866_RS27165;Parent=gene-STY7866_RS27165;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=STY7866_RS27165;partial=true;product=MarC family protein;pseudo=true;start_range=.,744;transl_table=11
NZ_CAAR01000247.1	RefSeq	gene	1244	2350	.	+	.	ID=gene-STY7866_RS10120;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=STY7866_RS10120
NZ_CAAR01000247.1	Protein Homology	CDS	1244	2350	.	+	0	ID=cds-WP_000799940.1;Parent=gene-STY7866_RS10120;Dbxref=Genbank:WP_000799940.1;Name=WP_000799940.1;gbkey=CDS;gene=asd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121607.1;locus_tag=STY7866_RS10120;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799940.1;transl_table=11
NZ_CAAR01000247.1	RefSeq	gene	2726	4912	.	+	.	ID=gene-STY7866_RS10125;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=STY7866_RS10125
NZ_CAAR01000247.1	Protein Homology	CDS	2726	4912	.	+	0	ID=cds-WP_000098552.1;Parent=gene-STY7866_RS10125;Dbxref=Genbank:WP_000098552.1;Name=WP_000098552.1;gbkey=CDS;gene=glgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458380.1;locus_tag=STY7866_RS10125;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_000098552.1;transl_table=11
NZ_CAAR01000247.1	RefSeq	pseudogene	4909	5755	.	+	.	ID=gene-STY7866_RS10130;Name=STY7866_RS10130;end_range=5755,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10130;partial=true;pseudo=true
NZ_CAAR01000247.1	Protein Homology	CDS	4909	5755	.	+	0	ID=cds-STY7866_RS10130;Parent=gene-STY7866_RS10130;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5755,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458381.1;locus_tag=STY7866_RS10130;partial=true;product=glycogen debranching enzyme;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000246.1 1 3346
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000246.1	RefSeq	region	1	3346	.	+	.	ID=NZ_CAAR01000246.1:1..3346;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000246.1	RefSeq	gene	1	855	.	+	.	ID=gene-STY7866_RS10090;Name=STY7866_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10090;partial=true;start_range=.,1
NZ_CAAR01000246.1	Protein Homology	CDS	1	855	.	+	0	ID=cds-WP_000324786.1;Parent=gene-STY7866_RS10090;Dbxref=Genbank:WP_000324786.1;Name=WP_000324786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456584.1;locus_tag=STY7866_RS10090;partial=true;product=cobalamin biosynthesis protein;protein_id=WP_000324786.1;start_range=.,1;transl_table=11
NZ_CAAR01000246.1	RefSeq	gene	866	1498	.	+	.	ID=gene-STY7866_RS10095;Name=STY7866_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10095
NZ_CAAR01000246.1	Protein Homology	CDS	866	1498	.	+	0	ID=cds-WP_000558992.1;Parent=gene-STY7866_RS10095;Dbxref=Genbank:WP_000558992.1;Name=WP_000558992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=STY7866_RS10095;product=cobalt-precorrin-8 methylmutase;protein_id=WP_000558992.1;transl_table=11
NZ_CAAR01000246.1	RefSeq	gene	1498	2637	.	+	.	ID=gene-STY7866_RS10100;Name=STY7866_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10100
NZ_CAAR01000246.1	Protein Homology	CDS	1498	2637	.	+	0	ID=cds-WP_001292925.1;Parent=gene-STY7866_RS10100;Dbxref=Genbank:WP_001292925.1;Name=WP_001292925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456583.1;locus_tag=STY7866_RS10100;product=cobalt-precorrin-5B (C(1))-methyltransferase;protein_id=WP_001292925.1;transl_table=11
NZ_CAAR01000246.1	RefSeq	gene	2631	3236	.	+	.	ID=gene-STY7866_RS10105;Name=STY7866_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10105
NZ_CAAR01000246.1	Protein Homology	CDS	2631	3236	.	+	0	ID=cds-WP_000958833.1;Parent=gene-STY7866_RS10105;Dbxref=Genbank:WP_000958833.1;Name=WP_000958833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456582.1;locus_tag=STY7866_RS10105;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_000958833.1;transl_table=11
NZ_CAAR01000246.1	RefSeq	pseudogene	3226	3346	.	+	.	ID=gene-STY7866_RS10110;Name=STY7866_RS10110;end_range=3346,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10110;partial=true;pseudo=true
NZ_CAAR01000246.1	Protein Homology	CDS	3226	3346	.	+	0	ID=cds-STY7866_RS10110;Parent=gene-STY7866_RS10110;Note=catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W%3B decarboxylating%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3346,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456581.1;locus_tag=STY7866_RS10110;partial=true;product=cobalt-precorrin-6Y C(15)-methyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000245.1 1 11519
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000245.1	RefSeq	region	1	11519	.	+	.	ID=NZ_CAAR01000245.1:1..11519;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000245.1	RefSeq	pseudogene	1	3744	.	+	.	ID=gene-STY7866_RS10055;Name=purL;gbkey=Gene;gene=purL;gene_biotype=pseudogene;gene_synonym=purI;locus_tag=STY7866_RS10055;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000245.1	Protein Homology	CDS	1	3744	.	+	2	ID=cds-STY7866_RS10055;Parent=gene-STY7866_RS10055;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;gene=purL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683423.1;locus_tag=STY7866_RS10055;partial=true;product=phosphoribosylformylglycinamidine synthase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000245.1	RefSeq	gene	4394	5824	.	+	.	ID=gene-STY7866_RS10060;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=STY7866_RS10060
NZ_CAAR01000245.1	Protein Homology	CDS	4394	5824	.	+	0	ID=cds-WP_001676035.1;Parent=gene-STY7866_RS10060;Dbxref=Genbank:WP_001676035.1;Name=WP_001676035.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847077.1;locus_tag=STY7866_RS10060;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_001676035.1;transl_table=11
NZ_CAAR01000245.1	RefSeq	gene	5826	6590	.	+	.	ID=gene-STY7866_RS10065;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=STY7866_RS10065
NZ_CAAR01000245.1	Protein Homology	CDS	5826	6590	.	+	0	ID=cds-WP_001054239.1;Parent=gene-STY7866_RS10065;Dbxref=Genbank:WP_001054239.1;Name=WP_001054239.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457093.1;locus_tag=STY7866_RS10065;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001054239.1;transl_table=11
NZ_CAAR01000245.1	RefSeq	gene	6587	7924	.	+	.	ID=gene-STY7866_RS10070;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=STY7866_RS10070
NZ_CAAR01000245.1	Protein Homology	CDS	6587	7924	.	+	0	ID=cds-WP_000625590.1;Parent=gene-STY7866_RS10070;Dbxref=Genbank:WP_000625590.1;Name=WP_000625590.1;gbkey=CDS;gene=glrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457092.1;locus_tag=STY7866_RS10070;product=two-component system response regulator GlrR;protein_id=WP_000625590.1;transl_table=11
NZ_CAAR01000245.1	RefSeq	pseudogene	8001	8338	.	+	.	ID=gene-STY7866_RS10075;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=pseudogene;locus_tag=STY7866_RS10075;pseudo=true
NZ_CAAR01000245.1	Protein Homology	CDS	8001	8338	.	+	0	ID=cds-STY7866_RS10075;Parent=gene-STY7866_RS10075;Note=frameshifted;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013574351.1;locus_tag=STY7866_RS10075;product=nitrogen regulatory protein P-II;pseudo=true;transl_table=11
NZ_CAAR01000245.1	RefSeq	gene	8387	9847	.	-	.	ID=gene-STY7866_RS10080;Name=STY7866_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10080
NZ_CAAR01000245.1	Protein Homology	CDS	8387	9847	.	-	0	ID=cds-WP_000856790.1;Parent=gene-STY7866_RS10080;Dbxref=Genbank:WP_000856790.1;Name=WP_000856790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457090.1;locus_tag=STY7866_RS10080;product=MFS transporter;protein_id=WP_000856790.1;transl_table=11
NZ_CAAR01000245.1	RefSeq	gene	9903	11519	.	-	.	ID=gene-STY7866_RS10085;Name=STY7866_RS10085;end_range=11519,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10085;partial=true
NZ_CAAR01000245.1	Protein Homology	CDS	9903	11519	.	-	0	ID=cds-WP_000618402.1;Parent=gene-STY7866_RS10085;Dbxref=Genbank:WP_000618402.1;Name=WP_000618402.1;end_range=11519,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457089.1;locus_tag=STY7866_RS10085;partial=true;product=lysine decarboxylase CadA;protein_id=WP_000618402.1;transl_table=11
##sequence-region NZ_CAAR01000244.1 1 14592
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000244.1	RefSeq	region	1	14592	.	+	.	ID=NZ_CAAR01000244.1:1..14592;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000244.1	RefSeq	pseudogene	1	215	.	-	.	ID=gene-STY7866_RS27150;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=pseudogene;locus_tag=STY7866_RS27150;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000244.1	Protein Homology	CDS	1	215	.	-	0	ID=cds-STY7866_RS27150;Parent=gene-STY7866_RS27150;Note=translocated by the type III secretion system SPI-2%3B localizes to Sifs in infected cells and specifically to Salmonella-containing vacuoles%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455895.1;locus_tag=STY7866_RS27150;partial=true;product=SPI-2 type III secretion system effector SifB;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000244.1	RefSeq	gene	744	1142	.	+	.	ID=gene-STY7866_RS09990;Name=STY7866_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09990
NZ_CAAR01000244.1	Protein Homology	CDS	744	1142	.	+	0	ID=cds-WP_000747901.1;Parent=gene-STY7866_RS09990;Dbxref=Genbank:WP_000747901.1;Name=WP_000747901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455896.1;locus_tag=STY7866_RS09990;product=hypothetical protein;protein_id=WP_000747901.1;transl_table=11
NZ_CAAR01000244.1	RefSeq	gene	1175	1405	.	+	.	ID=gene-STY7866_RS09995;Name=STY7866_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09995
NZ_CAAR01000244.1	Protein Homology	CDS	1175	1405	.	+	0	ID=cds-WP_010989159.1;Parent=gene-STY7866_RS09995;Dbxref=Genbank:WP_010989159.1;Name=WP_010989159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=STY7866_RS09995;product=hypothetical protein;protein_id=WP_010989159.1;transl_table=11
NZ_CAAR01000244.1	RefSeq	gene	1668	2438	.	+	.	ID=gene-STY7866_RS10000;Name=STY7866_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10000
NZ_CAAR01000244.1	Protein Homology	CDS	1668	2438	.	+	0	ID=cds-WP_000237711.1;Parent=gene-STY7866_RS10000;Dbxref=Genbank:WP_000237711.1;Name=WP_000237711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455898.1;locus_tag=STY7866_RS10000;product=M15 family metallopeptidase;protein_id=WP_000237711.1;transl_table=11
NZ_CAAR01000244.1	RefSeq	gene	2574	3998	.	+	.	ID=gene-STY7866_RS10005;Name=STY7866_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10005
NZ_CAAR01000244.1	Protein Homology	CDS	2574	3998	.	+	0	ID=cds-WP_000760699.1;Parent=gene-STY7866_RS10005;Dbxref=Genbank:WP_000760699.1;Name=WP_000760699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455899.1;locus_tag=STY7866_RS10005;product=PLP-dependent aminotransferase family protein;protein_id=WP_000760699.1;transl_table=11
NZ_CAAR01000244.1	RefSeq	gene	4113	5558	.	+	.	ID=gene-STY7866_RS10010;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=STY7866_RS10010
NZ_CAAR01000244.1	Protein Homology	CDS	4113	5558	.	+	0	ID=cds-WP_000158108.1;Parent=gene-STY7866_RS10010;Dbxref=Genbank:WP_000158108.1;Name=WP_000158108.1;gbkey=CDS;gene=patD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455900.3;locus_tag=STY7866_RS10010;product=aminobutyraldehyde dehydrogenase;protein_id=WP_000158108.1;transl_table=11
NZ_CAAR01000244.1	RefSeq	gene	5663	5758	.	-	.	ID=gene-STY7866_RS27155;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=STY7866_RS27155
NZ_CAAR01000244.1	Protein Homology	CDS	5663	5758	.	-	0	ID=cds-WP_001103198.1;Parent=gene-STY7866_RS27155;Dbxref=Genbank:WP_001103198.1;Name=WP_001103198.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=STY7866_RS27155;product=stress response membrane protein YncL;protein_id=WP_001103198.1;transl_table=11
NZ_CAAR01000244.1	RefSeq	gene	5896	5994	.	+	.	ID=gene-STY7866_RS27160;Name=STY7866_RS27160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27160
NZ_CAAR01000244.1	Protein Homology	CDS	5896	5994	.	+	0	ID=cds-WP_100208319.1;Parent=gene-STY7866_RS27160;Dbxref=Genbank:WP_100208319.1;Name=WP_100208319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001173343.1;locus_tag=STY7866_RS27160;product=GhoT/OrtT family toxin;protein_id=WP_100208319.1;transl_table=11
NZ_CAAR01000244.1	RefSeq	gene	6039	8186	.	-	.	ID=gene-STY7866_RS10020;Name=STY7866_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10020
NZ_CAAR01000244.1	Protein Homology	CDS	6039	8186	.	-	0	ID=cds-WP_000165637.1;Parent=gene-STY7866_RS10020;Dbxref=Genbank:WP_000165637.1;Name=WP_000165637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455901.1;locus_tag=STY7866_RS10020;product=virulence effector SrfC;protein_id=WP_000165637.1;transl_table=11
NZ_CAAR01000244.1	RefSeq	gene	8183	11164	.	-	.	ID=gene-STY7866_RS10025;Name=STY7866_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10025
NZ_CAAR01000244.1	Protein Homology	CDS	8183	11164	.	-	0	ID=cds-WP_000960825.1;Parent=gene-STY7866_RS10025;Dbxref=Genbank:WP_000960825.1;Name=WP_000960825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455902.1;locus_tag=STY7866_RS10025;product=virulence factor SrfB;protein_id=WP_000960825.1;transl_table=11
NZ_CAAR01000244.1	RefSeq	gene	11169	12494	.	-	.	ID=gene-STY7866_RS10030;Name=STY7866_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10030
NZ_CAAR01000244.1	Protein Homology	CDS	11169	12494	.	-	0	ID=cds-WP_001129971.1;Parent=gene-STY7866_RS10030;Dbxref=Genbank:WP_001129971.1;Name=WP_001129971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=STY7866_RS10030;product=hypothetical protein;protein_id=WP_001129971.1;transl_table=11
NZ_CAAR01000244.1	RefSeq	gene	12718	12951	.	+	.	ID=gene-STY7866_RS10035;Name=STY7866_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10035
NZ_CAAR01000244.1	Protein Homology	CDS	12718	12951	.	+	0	ID=cds-WP_000018716.1;Parent=gene-STY7866_RS10035;Dbxref=Genbank:WP_000018716.1;Name=WP_000018716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455904.1;locus_tag=STY7866_RS10035;product=YdcY family protein;protein_id=WP_000018716.1;transl_table=11
NZ_CAAR01000244.1	RefSeq	gene	12956	13405	.	-	.	ID=gene-STY7866_RS10040;Name=STY7866_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10040
NZ_CAAR01000244.1	Protein Homology	CDS	12956	13405	.	-	0	ID=cds-WP_001076571.1;Parent=gene-STY7866_RS10040;Dbxref=Genbank:WP_001076571.1;Name=WP_001076571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455905.1;locus_tag=STY7866_RS10040;product=DMT family transporter;protein_id=WP_001076571.1;transl_table=11
NZ_CAAR01000244.1	RefSeq	gene	13405	13920	.	-	.	ID=gene-STY7866_RS10045;Name=STY7866_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS10045
NZ_CAAR01000244.1	Protein Homology	CDS	13405	13920	.	-	0	ID=cds-WP_000155377.1;Parent=gene-STY7866_RS10045;Dbxref=Genbank:WP_000155377.1;Name=WP_000155377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455906.1;locus_tag=STY7866_RS10045;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WP_000155377.1;transl_table=11
NZ_CAAR01000244.1	RefSeq	pseudogene	14132	14592	.	+	.	ID=gene-STY7866_RS10050;Name=STY7866_RS10050;end_range=14592,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS10050;partial=true;pseudo=true
NZ_CAAR01000244.1	Protein Homology	CDS	14132	14592	.	+	0	ID=cds-STY7866_RS10050;Parent=gene-STY7866_RS10050;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=14592,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455907.1;locus_tag=STY7866_RS10050;partial=true;product=NADP-dependent oxidoreductase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000243.1 1 12226
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000243.1	RefSeq	region	1	12226	.	+	.	ID=NZ_CAAR01000243.1:1..12226;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000243.1	RefSeq	gene	1	1801	.	+	.	ID=gene-STY7866_RS09920;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=STY7866_RS09920;partial=true;start_range=.,1
NZ_CAAR01000243.1	Protein Homology	CDS	1	1801	.	+	1	ID=cds-WP_000296005.1;Parent=gene-STY7866_RS09920;Dbxref=Genbank:WP_000296005.1;Name=WP_000296005.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457423.1;locus_tag=STY7866_RS09920;partial=true;product=fimbrial outer membrane usher protein StdB;protein_id=WP_000296005.1;start_range=.,1;transl_table=11
NZ_CAAR01000243.1	RefSeq	gene	1842	2585	.	+	.	ID=gene-STY7866_RS09925;Name=STY7866_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09925
NZ_CAAR01000243.1	Protein Homology	CDS	1842	2585	.	+	0	ID=cds-WP_000798497.1;Parent=gene-STY7866_RS09925;Dbxref=Genbank:WP_000798497.1;Name=WP_000798497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457422.1;locus_tag=STY7866_RS09925;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000798497.1;transl_table=11
NZ_CAAR01000243.1	RefSeq	gene	2582	3658	.	+	.	ID=gene-STY7866_RS09930;Name=STY7866_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09930
NZ_CAAR01000243.1	Protein Homology	CDS	2582	3658	.	+	0	ID=cds-WP_000141334.1;Parent=gene-STY7866_RS09930;Dbxref=Genbank:WP_000141334.1;Name=WP_000141334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457421.1;locus_tag=STY7866_RS09930;product=hypothetical protein;protein_id=WP_000141334.1;transl_table=11
NZ_CAAR01000243.1	RefSeq	gene	3803	4315	.	+	.	ID=gene-STY7866_RS09935;Name=STY7866_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09935
NZ_CAAR01000243.1	Protein Homology	CDS	3803	4315	.	+	0	ID=cds-WP_000336256.1;Parent=gene-STY7866_RS09935;Dbxref=Genbank:WP_000336256.1;Name=WP_000336256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457420.1;locus_tag=STY7866_RS09935;product=CaiF/GrlA family transcriptional regulator;protein_id=WP_000336256.1;transl_table=11
NZ_CAAR01000243.1	RefSeq	gene	4302	5060	.	+	.	ID=gene-STY7866_RS09940;Name=STY7866_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09940
NZ_CAAR01000243.1	Protein Homology	CDS	4302	5060	.	+	0	ID=cds-WP_000134788.1;Parent=gene-STY7866_RS09940;Dbxref=Genbank:WP_000134788.1;Name=WP_000134788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457419.1;locus_tag=STY7866_RS09940;product=transcriptional regulator;protein_id=WP_000134788.1;transl_table=11
NZ_CAAR01000243.1	RefSeq	pseudogene	5270	6136	.	-	.	ID=gene-STY7866_RS09945;Name=STY7866_RS09945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09945;pseudo=true
NZ_CAAR01000243.1	Protein Homology	CDS	5270	6136	.	-	0	ID=cds-STY7866_RS09945;Parent=gene-STY7866_RS09945;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=STY7866_RS09945;product=nickel/cobalt efflux protein RcnA;pseudo=true;transl_table=11
NZ_CAAR01000243.1	RefSeq	gene	6258	6530	.	+	.	ID=gene-STY7866_RS09950;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=STY7866_RS09950
NZ_CAAR01000243.1	Protein Homology	CDS	6258	6530	.	+	0	ID=cds-WP_000019953.1;Parent=gene-STY7866_RS09950;Dbxref=Genbank:WP_000019953.1;Name=WP_000019953.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457418.1;locus_tag=STY7866_RS09950;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019953.1;transl_table=11
NZ_CAAR01000243.1	RefSeq	gene	6561	7790	.	-	.	ID=gene-STY7866_RS09955;Name=STY7866_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09955
NZ_CAAR01000243.1	Protein Homology	CDS	6561	7790	.	-	0	ID=cds-WP_000036833.1;Parent=gene-STY7866_RS09955;Dbxref=Genbank:WP_000036833.1;Name=WP_000036833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457417.1;locus_tag=STY7866_RS09955;product=transporter;protein_id=WP_000036833.1;transl_table=11
NZ_CAAR01000243.1	RefSeq	gene	7932	8387	.	-	.	ID=gene-STY7866_RS09960;Name=STY7866_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09960
NZ_CAAR01000243.1	Protein Homology	CDS	7932	8387	.	-	0	ID=cds-WP_001519547.1;Parent=gene-STY7866_RS09960;Dbxref=Genbank:WP_001519547.1;Name=WP_001519547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785723.1;locus_tag=STY7866_RS09960;product=multidrug/biocide efflux PACE transporter;protein_id=WP_001519547.1;transl_table=11
NZ_CAAR01000243.1	RefSeq	gene	8491	9354	.	+	.	ID=gene-STY7866_RS09965;Name=STY7866_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09965
NZ_CAAR01000243.1	Protein Homology	CDS	8491	9354	.	+	0	ID=cds-WP_001270764.1;Parent=gene-STY7866_RS09965;Dbxref=Genbank:WP_001270764.1;Name=WP_001270764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457415.1;locus_tag=STY7866_RS09965;product=LysR family transcriptional regulator;protein_id=WP_001270764.1;transl_table=11
NZ_CAAR01000243.1	RefSeq	gene	9477	10655	.	+	.	ID=gene-STY7866_RS09970;Name=STY7866_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09970
NZ_CAAR01000243.1	Protein Homology	CDS	9477	10655	.	+	0	ID=cds-WP_000665983.1;Parent=gene-STY7866_RS09970;Dbxref=Genbank:WP_000665983.1;Name=WP_000665983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457414.1;locus_tag=STY7866_RS09970;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000665983.1;transl_table=11
NZ_CAAR01000243.1	RefSeq	gene	11085	11921	.	+	.	ID=gene-STY7866_RS09975;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=STY7866_RS09975
NZ_CAAR01000243.1	Protein Homology	CDS	11085	11921	.	+	0	ID=cds-WP_000383268.1;Parent=gene-STY7866_RS09975;Dbxref=Genbank:WP_000383268.1;Name=WP_000383268.1;gbkey=CDS;gene=kduI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457413.1;locus_tag=STY7866_RS09975;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383268.1;transl_table=11
NZ_CAAR01000243.1	RefSeq	gene	11976	12226	.	+	.	ID=gene-STY7866_RS09980;Name=STY7866_RS09980;end_range=12226,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09980;partial=true
NZ_CAAR01000243.1	Protein Homology	CDS	11976	12226	.	+	0	ID=cds-WP_000602484.1;Parent=gene-STY7866_RS09980;Dbxref=Genbank:WP_000602484.1;Name=WP_000602484.1;end_range=12226,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457412.1;locus_tag=STY7866_RS09980;partial=true;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_000602484.1;transl_table=11
##sequence-region NZ_CAAR01000242.1 1 12709
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000242.1	RefSeq	region	1	12709	.	+	.	ID=NZ_CAAR01000242.1:1..12709;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000242.1	RefSeq	pseudogene	1	128	.	-	.	ID=gene-STY7866_RS09845;Name=STY7866_RS09845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09845;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000242.1	Protein Homology	CDS	1	128	.	-	0	ID=cds-STY7866_RS09845;Parent=gene-STY7866_RS09845;Note=catalyzes the formation of glutamate from glutamine%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=STY7866_RS09845;partial=true;product=glutaminase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000242.1	RefSeq	gene	201	1589	.	-	.	ID=gene-STY7866_RS09850;Name=STY7866_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09850
NZ_CAAR01000242.1	Protein Homology	CDS	201	1589	.	-	0	ID=cds-WP_000178404.1;Parent=gene-STY7866_RS09850;Dbxref=Genbank:WP_000178404.1;Name=WP_000178404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=STY7866_RS09850;product=succinate-semialdehyde dehydrogenase;protein_id=WP_000178404.1;transl_table=11
NZ_CAAR01000242.1	RefSeq	gene	1692	2564	.	+	.	ID=gene-STY7866_RS09855;Name=STY7866_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09855
NZ_CAAR01000242.1	Protein Homology	CDS	1692	2564	.	+	0	ID=cds-WP_000366540.1;Parent=gene-STY7866_RS09855;Dbxref=Genbank:WP_000366540.1;Name=WP_000366540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455957.1;locus_tag=STY7866_RS09855;product=LysR family transcriptional regulator;protein_id=WP_000366540.1;transl_table=11
NZ_CAAR01000242.1	RefSeq	pseudogene	2680	3871	.	+	.	ID=gene-STY7866_RS09860;Name=STY7866_RS09860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09860;pseudo=true
NZ_CAAR01000242.1	Protein Homology	CDS	2680	3871	.	+	0	ID=cds-STY7866_RS09860;Parent=gene-STY7866_RS09860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455958.1;locus_tag=STY7866_RS09860;product=sugar transporter;pseudo=true;transl_table=11
NZ_CAAR01000242.1	RefSeq	gene	3918	4583	.	-	.	ID=gene-STY7866_RS09865;Name=STY7866_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09865
NZ_CAAR01000242.1	Protein Homology	CDS	3918	4583	.	-	0	ID=cds-WP_000968968.1;Parent=gene-STY7866_RS09865;Dbxref=Genbank:WP_000968968.1;Name=WP_000968968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455959.1;locus_tag=STY7866_RS09865;product=MarC family NAAT transporter;protein_id=WP_000968968.1;transl_table=11
NZ_CAAR01000242.1	RefSeq	gene	4842	5276	.	+	.	ID=gene-STY7866_RS09870;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=STY7866_RS09870
NZ_CAAR01000242.1	Protein Homology	CDS	4842	5276	.	+	0	ID=cds-WP_000843434.1;Parent=gene-STY7866_RS09870;Dbxref=Genbank:WP_000843434.1;Name=WP_000843434.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=STY7866_RS09870;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843434.1;transl_table=11
NZ_CAAR01000242.1	RefSeq	gene	5296	5679	.	+	.	ID=gene-STY7866_RS09875;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=STY7866_RS09875
NZ_CAAR01000242.1	Protein Homology	CDS	5296	5679	.	+	0	ID=cds-WP_000091194.1;Parent=gene-STY7866_RS09875;Dbxref=Genbank:WP_000091194.1;Name=WP_000091194.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=STY7866_RS09875;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091194.1;transl_table=11
NZ_CAAR01000242.1	RefSeq	gene	5708	5923	.	+	.	ID=gene-STY7866_RS09880;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=STY7866_RS09880
NZ_CAAR01000242.1	Protein Homology	CDS	5708	5923	.	+	0	ID=cds-WP_000783049.1;Parent=gene-STY7866_RS09880;Dbxref=Genbank:WP_000783049.1;Name=WP_000783049.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455962.1;locus_tag=STY7866_RS09880;product=multiple antibiotic resistance protein MarB;protein_id=WP_000783049.1;transl_table=11
NZ_CAAR01000242.1	RefSeq	gene	6042	6944	.	-	.	ID=gene-STY7866_RS09885;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=STY7866_RS09885
NZ_CAAR01000242.1	Protein Homology	CDS	6042	6944	.	-	0	ID=cds-WP_000987753.1;Parent=gene-STY7866_RS09885;Dbxref=Genbank:WP_000987753.1;Name=WP_000987753.1;gbkey=CDS;gene=eamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455963.1;locus_tag=STY7866_RS09885;product=O-acetylserine/cysteine exporter;protein_id=WP_000987753.1;transl_table=11
NZ_CAAR01000242.1	RefSeq	gene	7172	8359	.	+	.	ID=gene-STY7866_RS09890;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=STY7866_RS09890
NZ_CAAR01000242.1	Protein Homology	CDS	7172	8359	.	+	0	ID=cds-WP_001068053.1;Parent=gene-STY7866_RS09890;Dbxref=Genbank:WP_001068053.1;Name=WP_001068053.1;gbkey=CDS;gene=ydeE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455964.1;locus_tag=STY7866_RS09890;product=efflux MFS transporter YdeE;protein_id=WP_001068053.1;transl_table=11
NZ_CAAR01000242.1	RefSeq	gene	8609	8704	.	+	.	ID=gene-STY7866_RS09895;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=STY7866_RS09895
NZ_CAAR01000242.1	Protein Homology	CDS	8609	8704	.	+	0	ID=cds-WP_000901531.1;Parent=gene-STY7866_RS09895;Dbxref=Genbank:WP_000901531.1;Name=WP_000901531.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=STY7866_RS09895;product=protein MgtS;protein_id=WP_000901531.1;transl_table=11
NZ_CAAR01000242.1	RefSeq	pseudogene	9051	9424	.	-	.	ID=gene-STY7866_RS09900;Name=STY7866_RS09900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09900;pseudo=true
NZ_CAAR01000242.1	Protein Homology	CDS	9051	9424	.	-	0	ID=cds-STY7866_RS09900;Parent=gene-STY7866_RS09900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=STY7866_RS09900;product=YdeI family stress tolerance OB fold protein;pseudo=true;transl_table=11
NZ_CAAR01000242.1	RefSeq	gene	9851	10378	.	+	.	ID=gene-STY7866_RS09905;Name=STY7866_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09905
NZ_CAAR01000242.1	Protein Homology	CDS	9851	10378	.	+	0	ID=cds-WP_001235351.1;Parent=gene-STY7866_RS09905;Dbxref=Genbank:WP_001235351.1;Name=WP_001235351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455966.1;locus_tag=STY7866_RS09905;product=2-oxo-tetronate isomerase;protein_id=WP_001235351.1;transl_table=11
NZ_CAAR01000242.1	RefSeq	gene	10498	10680	.	-	.	ID=gene-STY7866_RS09910;Name=STY7866_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09910
NZ_CAAR01000242.1	Protein Homology	CDS	10498	10680	.	-	0	ID=cds-WP_000807642.1;Parent=gene-STY7866_RS09910;Dbxref=Genbank:WP_000807642.1;Name=WP_000807642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455967.1;locus_tag=STY7866_RS09910;product=general stress protein;protein_id=WP_000807642.1;transl_table=11
NZ_CAAR01000242.1	RefSeq	gene	10827	11027	.	+	.	ID=gene-STY7866_RS27145;Name=STY7866_RS27145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27145
NZ_CAAR01000242.1	Protein Homology	CDS	10827	11027	.	+	0	ID=cds-WP_071777316.1;Parent=gene-STY7866_RS27145;Dbxref=Genbank:WP_071777316.1;Name=WP_071777316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218829.1;locus_tag=STY7866_RS27145;product=hypothetical protein;protein_id=WP_071777316.1;transl_table=11
NZ_CAAR01000242.1	RefSeq	gene	11024	12709	.	-	.	ID=gene-STY7866_RS09915;Name=dcp;end_range=12709,.;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=STY7866_RS09915;partial=true
NZ_CAAR01000242.1	Protein Homology	CDS	11024	12709	.	-	0	ID=cds-WP_000303296.1;Parent=gene-STY7866_RS09915;Dbxref=Genbank:WP_000303296.1;Name=WP_000303296.1;end_range=12709,.;gbkey=CDS;gene=dcp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455968.1;locus_tag=STY7866_RS09915;partial=true;product=peptidyl-dipeptidase Dcp;protein_id=WP_000303296.1;transl_table=11
##sequence-region NZ_CAAR01000241.1 1 9530
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000241.1	RefSeq	region	1	9530	.	+	.	ID=NZ_CAAR01000241.1:1..9530;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000241.1	RefSeq	gene	67	1086	.	-	.	ID=gene-STY7866_RS09800;Name=STY7866_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09800
NZ_CAAR01000241.1	Protein Homology	CDS	67	1086	.	-	0	ID=cds-WP_000836484.1;Parent=gene-STY7866_RS09800;Dbxref=Genbank:WP_000836484.1;Name=WP_000836484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=STY7866_RS09800;product=Zn-dependent oxidoreductase;protein_id=WP_000836484.1;transl_table=11
NZ_CAAR01000241.1	RefSeq	gene	1097	2311	.	-	.	ID=gene-STY7866_RS09805;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=STY7866_RS09805
NZ_CAAR01000241.1	Protein Homology	CDS	1097	2311	.	-	0	ID=cds-WP_000706283.1;Parent=gene-STY7866_RS09805;Dbxref=Genbank:WP_000706283.1;Name=WP_000706283.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=STY7866_RS09805;product=starvation-sensing protein RspA;protein_id=WP_000706283.1;transl_table=11
NZ_CAAR01000241.1	RefSeq	gene	2433	2759	.	-	.	ID=gene-STY7866_RS09810;Name=STY7866_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09810
NZ_CAAR01000241.1	Protein Homology	CDS	2433	2759	.	-	0	ID=cds-WP_000921383.1;Parent=gene-STY7866_RS09810;Dbxref=Genbank:WP_000921383.1;Name=WP_000921383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455976.1;locus_tag=STY7866_RS09810;product=YnfA family protein;protein_id=WP_000921383.1;transl_table=11
NZ_CAAR01000241.1	RefSeq	gene	2912	3253	.	+	.	ID=gene-STY7866_RS09815;Name=STY7866_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09815
NZ_CAAR01000241.1	Protein Homology	CDS	2912	3253	.	+	0	ID=cds-WP_001066440.1;Parent=gene-STY7866_RS09815;Dbxref=Genbank:WP_001066440.1;Name=WP_001066440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455977.1;locus_tag=STY7866_RS09815;product=DUF1283 family protein;protein_id=WP_001066440.1;transl_table=11
NZ_CAAR01000241.1	RefSeq	gene	3289	3849	.	+	.	ID=gene-STY7866_RS09820;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=STY7866_RS09820
NZ_CAAR01000241.1	Protein Homology	CDS	3289	3849	.	+	0	ID=cds-WP_000199998.1;Parent=gene-STY7866_RS09820;Dbxref=Genbank:WP_000199998.1;Name=WP_000199998.1;gbkey=CDS;gene=speG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455978.1;locus_tag=STY7866_RS09820;product=spermidine N1-acetyltransferase;protein_id=WP_000199998.1;transl_table=11
NZ_CAAR01000241.1	RefSeq	gene	3890	4600	.	-	.	ID=gene-STY7866_RS09825;Name=STY7866_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09825
NZ_CAAR01000241.1	Protein Homology	CDS	3890	4600	.	-	0	ID=cds-WP_000743128.1;Parent=gene-STY7866_RS09825;Dbxref=Genbank:WP_000743128.1;Name=WP_000743128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455979.1;locus_tag=STY7866_RS09825;product=YnfC family lipoprotein;protein_id=WP_000743128.1;transl_table=11
NZ_CAAR01000241.1	RefSeq	gene	4707	5012	.	+	.	ID=gene-STY7866_RS09830;Name=STY7866_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09830
NZ_CAAR01000241.1	Protein Homology	CDS	4707	5012	.	+	0	ID=cds-WP_001764090.1;Parent=gene-STY7866_RS09830;Dbxref=Genbank:WP_001764090.1;Name=WP_001764090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764090.1;locus_tag=STY7866_RS09830;product=DUF1161 domain-containing protein;protein_id=WP_001764090.1;transl_table=11
NZ_CAAR01000241.1	RefSeq	gene	5169	7607	.	+	.	ID=gene-STY7866_RS09835;Name=STY7866_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09835
NZ_CAAR01000241.1	Protein Homology	CDS	5169	7607	.	+	0	ID=cds-WP_001117601.1;Parent=gene-STY7866_RS09835;Dbxref=Genbank:WP_001117601.1;Name=WP_001117601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455980.1;locus_tag=STY7866_RS09835;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_001117601.1;transl_table=11
NZ_CAAR01000241.1	RefSeq	gene	7709	9530	.	+	.	ID=gene-STY7866_RS09840;Name=STY7866_RS09840;end_range=9530,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09840;partial=true
NZ_CAAR01000241.1	Protein Homology	CDS	7709	9530	.	+	0	ID=cds-WP_000705266.1;Parent=gene-STY7866_RS09840;Dbxref=Genbank:WP_000705266.1;Name=WP_000705266.1;end_range=9530,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455981.1;locus_tag=STY7866_RS09840;partial=true;product=molybdopterin-dependent oxidoreductase;protein_id=WP_000705266.1;transl_table=11
##sequence-region NZ_CAAR01000240.1 1 10777
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000240.1	RefSeq	region	1	10777	.	+	.	ID=NZ_CAAR01000240.1:1..10777;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000240.1	RefSeq	gene	1	636	.	-	.	ID=gene-STY7866_RS09775;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=STY7866_RS09775;partial=true;start_range=.,1
NZ_CAAR01000240.1	Protein Homology	CDS	1	636	.	-	0	ID=cds-WP_001764089.1;Parent=gene-STY7866_RS09775;Dbxref=Genbank:WP_001764089.1;Name=WP_001764089.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098282.1;locus_tag=STY7866_RS09775;partial=true;product=dimethylsulfoxide reductase subunit B;protein_id=WP_001764089.1;start_range=.,1;transl_table=11
NZ_CAAR01000240.1	RefSeq	pseudogene	633	3037	.	-	.	ID=gene-STY7866_RS09780;Name=STY7866_RS09780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09780;pseudo=true
NZ_CAAR01000240.1	Protein Homology	CDS	633	3037	.	-	0	ID=cds-STY7866_RS09780;Parent=gene-STY7866_RS09780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461465.1;locus_tag=STY7866_RS09780;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11
NZ_CAAR01000240.1	RefSeq	gene	3166	5481	.	-	.	ID=gene-STY7866_RS09785;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=STY7866_RS09785
NZ_CAAR01000240.1	Protein Homology	CDS	3166	5481	.	-	0	ID=cds-WP_001014751.1;Parent=gene-STY7866_RS09785;Dbxref=Genbank:WP_001014751.1;Name=WP_001014751.1;Note=penicillin-binding protein 1C;gbkey=CDS;gene=pbpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457062.1;locus_tag=STY7866_RS09785;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_001014751.1;transl_table=11
NZ_CAAR01000240.1	RefSeq	gene	5482	10416	.	-	.	ID=gene-STY7866_RS09790;Name=STY7866_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09790
NZ_CAAR01000240.1	Protein Homology	CDS	5482	10416	.	-	0	ID=cds-WP_000681887.1;Parent=gene-STY7866_RS09790;Dbxref=Genbank:WP_000681887.1;Name=WP_000681887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457063.1;locus_tag=STY7866_RS09790;product=alpha-2-macroglobulin family protein;protein_id=WP_000681887.1;transl_table=11
NZ_CAAR01000240.1	RefSeq	pseudogene	10625	10777	.	+	.	ID=gene-STY7866_RS27140;Name=STY7866_RS27140;end_range=10777,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27140;partial=true;pseudo=true
NZ_CAAR01000240.1	Protein Homology	CDS	10625	10777	.	+	0	ID=cds-STY7866_RS27140;Parent=gene-STY7866_RS27140;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=10777,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457064.1;locus_tag=STY7866_RS27140;partial=true;product=sulfurtransferase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000239.1 1 2188
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000239.1	RefSeq	region	1	2188	.	+	.	ID=NZ_CAAR01000239.1:1..2188;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000239.1	RefSeq	pseudogene	1	338	.	-	.	ID=gene-STY7866_RS09760;Name=STY7866_RS09760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09760;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000239.1	Protein Homology	CDS	1	338	.	-	0	ID=cds-STY7866_RS09760;Parent=gene-STY7866_RS09760;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456911.1;locus_tag=STY7866_RS09760;partial=true;product=aspartate-semialdehyde dehydrogenase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000239.1	RefSeq	gene	406	1542	.	-	.	ID=gene-STY7866_RS09765;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=STY7866_RS09765
NZ_CAAR01000239.1	Protein Homology	CDS	406	1542	.	-	0	ID=cds-WP_000699178.1;Parent=gene-STY7866_RS09765;Dbxref=Genbank:WP_000699178.1;Name=WP_000699178.1;gbkey=CDS;gene=pdxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456912.1;locus_tag=STY7866_RS09765;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699178.1;transl_table=11
NZ_CAAR01000239.1	RefSeq	pseudogene	1646	2188	.	+	.	ID=gene-STY7866_RS09770;Name=flk;end_range=2188,.;gbkey=Gene;gene=flk;gene_biotype=pseudogene;locus_tag=STY7866_RS09770;partial=true;pseudo=true
NZ_CAAR01000239.1	Protein Homology	CDS	1646	2188	.	+	0	ID=cds-STY7866_RS09770;Parent=gene-STY7866_RS09770;Note=in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system%3B lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm%3B inner membrane-anchored protein%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2188,.;gbkey=CDS;gene=flk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456913.1;locus_tag=STY7866_RS09770;partial=true;product=flagella biosynthesis regulator Flk;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000238.1 1 1824
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000238.1	RefSeq	region	1	1824	.	+	.	ID=NZ_CAAR01000238.1:1..1824;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000238.1	RefSeq	gene	6	1346	.	+	.	ID=gene-STY7866_RS09750;Name=STY7866_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09750
NZ_CAAR01000238.1	Protein Homology	CDS	6	1346	.	+	0	ID=cds-WP_001200730.1;Parent=gene-STY7866_RS09750;Dbxref=Genbank:WP_001200730.1;Name=WP_001200730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506259.1;locus_tag=STY7866_RS09750;product=MHS family MFS transporter;protein_id=WP_001200730.1;transl_table=11
NZ_CAAR01000238.1	RefSeq	pseudogene	1490	1824	.	+	.	ID=gene-STY7866_RS09755;Name=STY7866_RS09755;end_range=1824,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09755;partial=true;pseudo=true
NZ_CAAR01000238.1	Protein Homology	CDS	1490	1824	.	+	0	ID=cds-STY7866_RS09755;Parent=gene-STY7866_RS09755;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1824,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455972.1;locus_tag=STY7866_RS09755;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000237.1 1 15618
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000237.1	RefSeq	region	1	15618	.	+	.	ID=NZ_CAAR01000237.1:1..15618;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000237.1	RefSeq	pseudogene	1	349	.	+	.	ID=gene-STY7866_RS09665;Name=STY7866_RS09665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09665;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000237.1	Protein Homology	CDS	1	349	.	+	1	ID=cds-STY7866_RS09665;Parent=gene-STY7866_RS09665;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456723.1;locus_tag=STY7866_RS09665;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000237.1	RefSeq	gene	333	1064	.	+	.	ID=gene-STY7866_RS09670;Name=STY7866_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09670
NZ_CAAR01000237.1	Protein Homology	CDS	333	1064	.	+	0	ID=cds-WP_000824854.1;Parent=gene-STY7866_RS09670;Dbxref=Genbank:WP_000824854.1;Name=WP_000824854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456722.1;locus_tag=STY7866_RS09670;product=ABC transporter permease;protein_id=WP_000824854.1;transl_table=11
NZ_CAAR01000237.1	RefSeq	gene	1045	1152	.	-	.	ID=gene-STY7866_RS09675;Name=STY7866_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09675
NZ_CAAR01000237.1	Protein Homology	CDS	1045	1152	.	-	0	ID=cds-WP_001261696.1;Parent=gene-STY7866_RS09675;Dbxref=Genbank:WP_001261696.1;Name=WP_001261696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456721.1;locus_tag=STY7866_RS09675;product=protein YohO;protein_id=WP_001261696.1;transl_table=11
NZ_CAAR01000237.1	RefSeq	gene	1212	1943	.	-	.	ID=gene-STY7866_RS09680;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=STY7866_RS09680
NZ_CAAR01000237.1	Protein Homology	CDS	1212	1943	.	-	0	ID=cds-WP_001240415.1;Parent=gene-STY7866_RS09680;Dbxref=Genbank:WP_001240415.1;Name=WP_001240415.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456720.1;locus_tag=STY7866_RS09680;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240415.1;transl_table=11
NZ_CAAR01000237.1	RefSeq	gene	2166	3851	.	+	.	ID=gene-STY7866_RS09685;Name=STY7866_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09685
NZ_CAAR01000237.1	Protein Homology	CDS	2166	3851	.	+	0	ID=cds-WP_001764081.1;Parent=gene-STY7866_RS09685;Dbxref=Genbank:WP_001764081.1;Name=WP_001764081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456719.1;locus_tag=STY7866_RS09685;product=sensor histidine kinase;protein_id=WP_001764081.1;transl_table=11
NZ_CAAR01000237.1	RefSeq	gene	3848	4567	.	+	.	ID=gene-STY7866_RS09690;Name=yehT;gbkey=Gene;gene=yehT;gene_biotype=protein_coding;locus_tag=STY7866_RS09690
NZ_CAAR01000237.1	Protein Homology	CDS	3848	4567	.	+	0	ID=cds-WP_000598637.1;Parent=gene-STY7866_RS09690;Dbxref=Genbank:WP_000598637.1;Name=WP_000598637.1;gbkey=CDS;gene=yehT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=STY7866_RS09690;product=two-component system response regulator BtsR;protein_id=WP_000598637.1;transl_table=11
NZ_CAAR01000237.1	RefSeq	gene	4614	5081	.	+	.	ID=gene-STY7866_RS09695;Name=STY7866_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09695
NZ_CAAR01000237.1	Protein Homology	CDS	4614	5081	.	+	0	ID=cds-WP_000950413.1;Parent=gene-STY7866_RS09695;Dbxref=Genbank:WP_000950413.1;Name=WP_000950413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456717.1;locus_tag=STY7866_RS09695;product=DUF1456 family protein;protein_id=WP_000950413.1;transl_table=11
NZ_CAAR01000237.1	RefSeq	gene	5138	5668	.	-	.	ID=gene-STY7866_RS09700;Name=STY7866_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09700
NZ_CAAR01000237.1	Protein Homology	CDS	5138	5668	.	-	0	ID=cds-WP_001197951.1;Parent=gene-STY7866_RS09700;Dbxref=Genbank:WP_001197951.1;Name=WP_001197951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456716.1;locus_tag=STY7866_RS09700;product=YehR family lipoprotein;protein_id=WP_001197951.1;transl_table=11
NZ_CAAR01000237.1	RefSeq	gene	5840	6298	.	-	.	ID=gene-STY7866_RS09705;Name=STY7866_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09705
NZ_CAAR01000237.1	Protein Homology	CDS	5840	6298	.	-	0	ID=cds-WP_000703137.1;Parent=gene-STY7866_RS09705;Dbxref=Genbank:WP_000703137.1;Name=WP_000703137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456715.1;locus_tag=STY7866_RS09705;product=YehR family lipoprotein;protein_id=WP_000703137.1;transl_table=11
NZ_CAAR01000237.1	RefSeq	pseudogene	6539	8573	.	-	.	ID=gene-STY7866_RS09710;Name=metG;gbkey=Gene;gene=metG;gene_biotype=pseudogene;locus_tag=STY7866_RS09710;pseudo=true
NZ_CAAR01000237.1	Protein Homology	CDS	6539	8573	.	-	0	ID=cds-STY7866_RS09710;Parent=gene-STY7866_RS09710;Note=frameshifted;gbkey=CDS;gene=metG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456714.1;locus_tag=STY7866_RS09710;product=methionine--tRNA ligase;pseudo=true;transl_table=11
NZ_CAAR01000237.1	RefSeq	pseudogene	8738	9848	.	+	.	ID=gene-STY7866_RS09715;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=pseudogene;locus_tag=STY7866_RS09715;pseudo=true
NZ_CAAR01000237.1	Protein Homology	CDS	8738	9848	.	+	0	ID=cds-STY7866_RS09715;Parent=gene-STY7866_RS09715;Note=frameshifted;gbkey=CDS;gene=apbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456713.1;locus_tag=STY7866_RS09715;product=iron-sulfur cluster carrier protein ApbC;pseudo=true;transl_table=11
NZ_CAAR01000237.1	RefSeq	gene	10126	10407	.	+	.	ID=gene-STY7866_RS09720;Name=STY7866_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09720
NZ_CAAR01000237.1	Protein Homology	CDS	10126	10407	.	+	0	ID=cds-WP_000760404.1;Parent=gene-STY7866_RS09720;Dbxref=Genbank:WP_000760404.1;Name=WP_000760404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456712.1;locus_tag=STY7866_RS09720;product=YehE family protein;protein_id=WP_000760404.1;transl_table=11
NZ_CAAR01000237.1	RefSeq	gene	10686	11216	.	+	.	ID=gene-STY7866_RS09725;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=STY7866_RS09725
NZ_CAAR01000237.1	Protein Homology	CDS	10686	11216	.	+	0	ID=cds-WP_000830686.1;Parent=gene-STY7866_RS09725;Dbxref=Genbank:WP_000830686.1;Name=WP_000830686.1;gbkey=CDS;gene=yehD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456711.1;locus_tag=STY7866_RS09725;product=fimbrial protein YehD;protein_id=WP_000830686.1;transl_table=11
NZ_CAAR01000237.1	RefSeq	gene	11272	11955	.	+	.	ID=gene-STY7866_RS09730;Name=STY7866_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09730
NZ_CAAR01000237.1	Protein Homology	CDS	11272	11955	.	+	0	ID=cds-WP_000698775.1;Parent=gene-STY7866_RS09730;Dbxref=Genbank:WP_000698775.1;Name=WP_000698775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456710.1;locus_tag=STY7866_RS09730;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000698775.1;transl_table=11
NZ_CAAR01000237.1	RefSeq	gene	12076	14457	.	+	.	ID=gene-STY7866_RS09740;Name=STY7866_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09740
NZ_CAAR01000237.1	Protein Homology	CDS	12076	14457	.	+	0	ID=cds-WP_001764086.1;Parent=gene-STY7866_RS09740;Dbxref=Genbank:WP_001764086.1;Name=WP_001764086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001683898.1;locus_tag=STY7866_RS09740;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_001764086.1;transl_table=11
NZ_CAAR01000237.1	RefSeq	gene	14473	15480	.	+	.	ID=gene-STY7866_RS09745;Name=STY7866_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09745
NZ_CAAR01000237.1	Protein Homology	CDS	14473	15480	.	+	0	ID=cds-WP_000765280.1;Parent=gene-STY7866_RS09745;Dbxref=Genbank:WP_000765280.1;Name=WP_000765280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456708.1;locus_tag=STY7866_RS09745;product=putative fimbrial-like adhesin protein;protein_id=WP_000765280.1;transl_table=11
##sequence-region NZ_CAAR01000236.1 1 23024
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000236.1	RefSeq	region	1	23024	.	+	.	ID=NZ_CAAR01000236.1:1..23024;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000236.1	RefSeq	gene	99	677	.	-	.	ID=gene-STY7866_RS09535;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=STY7866_RS09535
NZ_CAAR01000236.1	Protein Homology	CDS	99	677	.	-	0	ID=cds-WP_000284366.1;Parent=gene-STY7866_RS09535;Dbxref=Genbank:WP_000284366.1;Name=WP_000284366.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458338.1;locus_tag=STY7866_RS09535;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000284366.1;transl_table=11
NZ_CAAR01000236.1	RefSeq	gene	729	1778	.	-	.	ID=gene-STY7866_RS09540;Name=STY7866_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09540
NZ_CAAR01000236.1	Protein Homology	CDS	729	1778	.	-	0	ID=cds-WP_000179588.1;Parent=gene-STY7866_RS09540;Dbxref=Genbank:WP_000179588.1;Name=WP_000179588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458339.1;locus_tag=STY7866_RS09540;product=AI-2E family transporter;protein_id=WP_000179588.1;transl_table=11
NZ_CAAR01000236.1	RefSeq	pseudogene	1910	3126	.	+	.	ID=gene-STY7866_RS09545;Name=STY7866_RS09545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09545;pseudo=true
NZ_CAAR01000236.1	Protein Homology	CDS	1910	3126	.	+	0	ID=cds-STY7866_RS09545;Parent=gene-STY7866_RS09545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458340.1;locus_tag=STY7866_RS09545;product=MFS transporter;pseudo=true;transl_table=11
NZ_CAAR01000236.1	RefSeq	pseudogene	3130	3688	.	-	.	ID=gene-STY7866_RS09550;Name=STY7866_RS09550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09550;pseudo=true
NZ_CAAR01000236.1	Protein Homology	CDS	3130	3688	.	-	0	ID=cds-STY7866_RS09550;Parent=gene-STY7866_RS09550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458341.1;locus_tag=STY7866_RS09550;product=DUF1795 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000236.1	RefSeq	gene	3761	4426	.	-	.	ID=gene-STY7866_RS09555;Name=STY7866_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09555
NZ_CAAR01000236.1	Protein Homology	CDS	3761	4426	.	-	0	ID=cds-WP_000187489.1;Parent=gene-STY7866_RS09555;Dbxref=Genbank:WP_000187489.1;Name=WP_000187489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458342.1;locus_tag=STY7866_RS09555;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_000187489.1;transl_table=11
NZ_CAAR01000236.1	RefSeq	gene	4596	4841	.	+	.	ID=gene-STY7866_RS09560;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=STY7866_RS09560
NZ_CAAR01000236.1	Protein Homology	CDS	4596	4841	.	+	0	ID=cds-WP_001541054.1;Parent=gene-STY7866_RS09560;Dbxref=Genbank:WP_001541054.1;Name=WP_001541054.1;gbkey=CDS;gene=tusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458343.1;locus_tag=STY7866_RS09560;product=sulfurtransferase TusA;protein_id=WP_001541054.1;transl_table=11
NZ_CAAR01000236.1	RefSeq	gene	4865	6508	.	-	.	ID=gene-STY7866_RS09565;Name=STY7866_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09565
NZ_CAAR01000236.1	Protein Homology	CDS	4865	6508	.	-	0	ID=cds-WP_000789682.1;Parent=gene-STY7866_RS09565;Dbxref=Genbank:WP_000789682.1;Name=WP_000789682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458344.1;locus_tag=STY7866_RS09565;product=methyl-accepting chemotaxis citrate transducer;protein_id=WP_000789682.1;transl_table=11
NZ_CAAR01000236.1	RefSeq	gene	6705	8903	.	-	.	ID=gene-STY7866_RS09570;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=STY7866_RS09570
NZ_CAAR01000236.1	Protein Homology	CDS	6705	8903	.	-	0	ID=cds-WP_000106671.1;Parent=gene-STY7866_RS09570;Dbxref=Genbank:WP_000106671.1;Name=WP_000106671.1;gbkey=CDS;gene=zntA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458345.1;locus_tag=STY7866_RS09570;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_000106671.1;transl_table=11
NZ_CAAR01000236.1	RefSeq	gene	8984	9610	.	-	.	ID=gene-STY7866_RS09575;Name=STY7866_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09575
NZ_CAAR01000236.1	Protein Homology	CDS	8984	9610	.	-	0	ID=cds-WP_000964735.1;Parent=gene-STY7866_RS09575;Dbxref=Genbank:WP_000964735.1;Name=WP_000964735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458346.1;locus_tag=STY7866_RS09575;product=lysoplasmalogenase;protein_id=WP_000964735.1;transl_table=11
NZ_CAAR01000236.1	RefSeq	pseudogene	9752	10124	.	+	.	ID=gene-STY7866_RS09580;Name=STY7866_RS09580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09580;pseudo=true
NZ_CAAR01000236.1	Protein Homology	CDS	9752	10124	.	+	0	ID=cds-STY7866_RS09580;Parent=gene-STY7866_RS09580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458347.1;locus_tag=STY7866_RS09580;product=DUF2500 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000236.1	RefSeq	gene	10146	10418	.	-	.	ID=gene-STY7866_RS09585;Name=STY7866_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09585
NZ_CAAR01000236.1	Protein Homology	CDS	10146	10418	.	-	0	ID=cds-WP_000979179.1;Parent=gene-STY7866_RS09585;Dbxref=Genbank:WP_000979179.1;Name=WP_000979179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458348.1;locus_tag=STY7866_RS09585;product=DUF1145 family protein;protein_id=WP_000979179.1;transl_table=11
NZ_CAAR01000236.1	RefSeq	gene	10405	11001	.	-	.	ID=gene-STY7866_RS09590;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=STY7866_RS09590
NZ_CAAR01000236.1	Protein Homology	CDS	10405	11001	.	-	0	ID=cds-WP_000743275.1;Parent=gene-STY7866_RS09590;Dbxref=Genbank:WP_000743275.1;Name=WP_000743275.1;gbkey=CDS;gene=rsmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458349.1;locus_tag=STY7866_RS09590;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743275.1;transl_table=11
NZ_CAAR01000236.1	RefSeq	gene	11127	12602	.	+	.	ID=gene-STY7866_RS09595;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=STY7866_RS09595
NZ_CAAR01000236.1	Protein Homology	CDS	11127	12602	.	+	0	ID=cds-WP_001118701.1;Parent=gene-STY7866_RS09595;Dbxref=Genbank:WP_001118701.1;Name=WP_001118701.1;gbkey=CDS;gene=ftsY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458350.1;locus_tag=STY7866_RS09595;product=signal recognition particle-docking protein FtsY;protein_id=WP_001118701.1;transl_table=11
NZ_CAAR01000236.1	RefSeq	gene	12605	13273	.	+	.	ID=gene-STY7866_RS09600;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=STY7866_RS09600
NZ_CAAR01000236.1	Protein Homology	CDS	12605	13273	.	+	0	ID=cds-WP_000617729.1;Parent=gene-STY7866_RS09600;Dbxref=Genbank:WP_000617729.1;Name=WP_000617729.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458351.1;locus_tag=STY7866_RS09600;product=cell division ATP-binding protein FtsE;protein_id=WP_000617729.1;transl_table=11
NZ_CAAR01000236.1	RefSeq	gene	13266	14321	.	+	.	ID=gene-STY7866_RS09605;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=STY7866_RS09605
NZ_CAAR01000236.1	Protein Homology	CDS	13266	14321	.	+	0	ID=cds-WP_001081708.1;Parent=gene-STY7866_RS09605;Dbxref=Genbank:WP_001081708.1;Name=WP_001081708.1;gbkey=CDS;gene=ftsX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458352.1;locus_tag=STY7866_RS09605;product=cell division protein FtsX;protein_id=WP_001081708.1;transl_table=11
NZ_CAAR01000236.1	RefSeq	pseudogene	14567	15423	.	+	.	ID=gene-STY7866_RS09610;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=pseudogene;locus_tag=STY7866_RS09610;pseudo=true
NZ_CAAR01000236.1	Protein Homology	CDS	14567	15423	.	+	0	ID=cds-STY7866_RS09610;Parent=gene-STY7866_RS09610;Note=frameshifted;gbkey=CDS;gene=rpoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458573.1;locus_tag=STY7866_RS09610;product=RNA polymerase sigma factor RpoH;pseudo=true;transl_table=11
NZ_CAAR01000236.1	RefSeq	pseudogene	15745	16848	.	+	.	ID=gene-STY7866_RS27135;Name=STY7866_RS27135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27135;pseudo=true
NZ_CAAR01000236.1	Protein Homology	CDS	15745	16848	.	+	0	ID=cds-STY7866_RS27135;Parent=gene-STY7866_RS27135;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=STY7866_RS27135;product=branched-chain amino acid ABC transporter substrate-binding protein;pseudo=true;transl_table=11
NZ_CAAR01000236.1	RefSeq	gene	16932	17066	.	-	.	ID=gene-STY7866_RS09625;Name=STY7866_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09625
NZ_CAAR01000236.1	Protein Homology	CDS	16932	17066	.	-	0	ID=cds-WP_001517957.1;Parent=gene-STY7866_RS09625;Dbxref=Genbank:WP_001517957.1;Name=WP_001517957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=STY7866_RS09625;product=hypothetical protein;protein_id=WP_001517957.1;transl_table=11
NZ_CAAR01000236.1	RefSeq	gene	17044	17427	.	-	.	ID=gene-STY7866_RS09630;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=STY7866_RS09630
NZ_CAAR01000236.1	Protein Homology	CDS	17044	17427	.	-	0	ID=cds-WP_000778873.1;Parent=gene-STY7866_RS09630;Dbxref=Genbank:WP_000778873.1;Name=WP_000778873.1;gbkey=CDS;gene=panM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458355.1;locus_tag=STY7866_RS09630;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778873.1;transl_table=11
NZ_CAAR01000236.1	RefSeq	gene	17849	18958	.	+	.	ID=gene-STY7866_RS09635;Name=livk;gbkey=Gene;gene=livk;gene_biotype=protein_coding;locus_tag=STY7866_RS09635
NZ_CAAR01000236.1	Protein Homology	CDS	17849	18958	.	+	0	ID=cds-WP_000822976.1;Parent=gene-STY7866_RS09635;Dbxref=Genbank:WP_000822976.1;Name=WP_000822976.1;gbkey=CDS;gene=livk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458356.1;locus_tag=STY7866_RS09635;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000822976.1;transl_table=11
NZ_CAAR01000236.1	RefSeq	pseudogene	19018	19943	.	+	.	ID=gene-STY7866_RS09640;Name=livH;gbkey=Gene;gene=livH;gene_biotype=pseudogene;locus_tag=STY7866_RS09640;pseudo=true
NZ_CAAR01000236.1	Protein Homology	CDS	19018	19943	.	+	0	ID=cds-STY7866_RS09640;Parent=gene-STY7866_RS09640;Note=frameshifted;gbkey=CDS;gene=livH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=STY7866_RS09640;product=high-affinity branched-chain amino acid ABC transporter permease LivH;pseudo=true;transl_table=11
NZ_CAAR01000236.1	RefSeq	gene	19940	21217	.	+	.	ID=gene-STY7866_RS09645;Name=STY7866_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09645
NZ_CAAR01000236.1	Protein Homology	CDS	19940	21217	.	+	0	ID=cds-WP_000803764.1;Parent=gene-STY7866_RS09645;Dbxref=Genbank:WP_000803764.1;Name=WP_000803764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458358.1;locus_tag=STY7866_RS09645;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=WP_000803764.1;transl_table=11
NZ_CAAR01000236.1	RefSeq	gene	21214	21981	.	+	.	ID=gene-STY7866_RS09650;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=STY7866_RS09650
NZ_CAAR01000236.1	Protein Homology	CDS	21214	21981	.	+	0	ID=cds-WP_000082083.1;Parent=gene-STY7866_RS09650;Dbxref=Genbank:WP_000082083.1;Name=WP_000082083.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=STY7866_RS09650;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082083.1;transl_table=11
NZ_CAAR01000236.1	RefSeq	gene	21983	22696	.	+	.	ID=gene-STY7866_RS09655;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=STY7866_RS09655
NZ_CAAR01000236.1	Protein Homology	CDS	21983	22696	.	+	0	ID=cds-WP_000416114.1;Parent=gene-STY7866_RS09655;Dbxref=Genbank:WP_000416114.1;Name=WP_000416114.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458360.1;locus_tag=STY7866_RS09655;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416114.1;transl_table=11
##sequence-region NZ_CAAR01000235.1 1 15028
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000235.1	RefSeq	region	1	15028	.	+	.	ID=NZ_CAAR01000235.1:1..15028;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000235.1	RefSeq	pseudogene	1	203	.	-	.	ID=gene-STY7866_RS09465;Name=STY7866_RS09465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09465;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000235.1	Protein Homology	CDS	1	203	.	-	0	ID=cds-STY7866_RS09465;Parent=gene-STY7866_RS09465;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457603.1;locus_tag=STY7866_RS09465;partial=true;product=double-stranded uracil-DNA glycosylase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000235.1	RefSeq	gene	329	404	.	+	.	ID=gene-STY7866_RS09470;Name=STY7866_RS09470;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS09470
NZ_CAAR01000235.1	tRNAscan-SE	tRNA	329	404	.	+	.	ID=rna-STY7866_RS09470;Parent=gene-STY7866_RS09470;anticodon=(pos:362..364);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS09470;product=tRNA-Met
NZ_CAAR01000235.1	tRNAscan-SE	exon	329	404	.	+	.	ID=exon-STY7866_RS09470-1;Parent=rna-STY7866_RS09470;anticodon=(pos:362..364);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS09470;product=tRNA-Met
NZ_CAAR01000235.1	RefSeq	gene	484	1251	.	-	.	ID=gene-STY7866_RS09475;Name=STY7866_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09475
NZ_CAAR01000235.1	Protein Homology	CDS	484	1251	.	-	0	ID=cds-WP_000213683.1;Parent=gene-STY7866_RS09475;Dbxref=Genbank:WP_000213683.1;Name=WP_000213683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457604.1;locus_tag=STY7866_RS09475;product=siderophore-interacting protein;protein_id=WP_000213683.1;transl_table=11
NZ_CAAR01000235.1	RefSeq	gene	1483	2130	.	+	.	ID=gene-STY7866_RS09480;Name=STY7866_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09480
NZ_CAAR01000235.1	Protein Homology	CDS	1483	2130	.	+	0	ID=cds-WP_086011941.1;Parent=gene-STY7866_RS09480;Dbxref=Genbank:WP_086011941.1;Name=WP_086011941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=STY7866_RS09480;product=PadR family transcriptional regulator;protein_id=WP_086011941.1;transl_table=11
NZ_CAAR01000235.1	RefSeq	gene	2127	3695	.	-	.	ID=gene-STY7866_RS09485;Name=STY7866_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09485
NZ_CAAR01000235.1	Protein Homology	CDS	2127	3695	.	-	0	ID=cds-WP_000478457.1;Parent=gene-STY7866_RS09485;Dbxref=Genbank:WP_000478457.1;Name=WP_000478457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457606.1;locus_tag=STY7866_RS09485;product=HAMP domain-containing protein;protein_id=WP_000478457.1;transl_table=11
NZ_CAAR01000235.1	RefSeq	gene	4083	5603	.	-	.	ID=gene-STY7866_RS09490;Name=STY7866_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09490
NZ_CAAR01000235.1	Protein Homology	CDS	4083	5603	.	-	0	ID=cds-WP_000094654.1;Parent=gene-STY7866_RS09490;Dbxref=Genbank:WP_000094654.1;Name=WP_000094654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457607.1;locus_tag=STY7866_RS09490;product=PAS domain-containing methyl-accepting chemotaxis protein;protein_id=WP_000094654.1;transl_table=11
NZ_CAAR01000235.1	RefSeq	gene	5982	7412	.	+	.	ID=gene-STY7866_RS09495;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=STY7866_RS09495
NZ_CAAR01000235.1	Protein Homology	CDS	5982	7412	.	+	0	ID=cds-WP_122023570.1;Parent=gene-STY7866_RS09495;Dbxref=Genbank:WP_122023570.1;Name=WP_122023570.1;gbkey=CDS;gene=ygjG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640213.1;locus_tag=STY7866_RS09495;product=putrescine aminotransferase;protein_id=WP_122023570.1;transl_table=11
NZ_CAAR01000235.1	RefSeq	pseudogene	7583	9601	.	+	.	ID=gene-STY7866_RS09500;Name=STY7866_RS09500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09500;pseudo=true
NZ_CAAR01000235.1	Protein Homology	CDS	7583	9601	.	+	0	ID=cds-STY7866_RS09500;Parent=gene-STY7866_RS09500;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=STY7866_RS09500;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;pseudo=true;transl_table=11
NZ_CAAR01000235.1	RefSeq	gene	9682	10818	.	-	.	ID=gene-STY7866_RS09505;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=STY7866_RS09505
NZ_CAAR01000235.1	Protein Homology	CDS	9682	10818	.	-	0	ID=cds-WP_000019977.1;Parent=gene-STY7866_RS09505;Dbxref=Genbank:WP_000019977.1;Name=WP_000019977.1;gbkey=CDS;gene=rlmG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457609.1;locus_tag=STY7866_RS09505;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000019977.1;transl_table=11
NZ_CAAR01000235.1	RefSeq	gene	10904	11401	.	+	.	ID=gene-STY7866_RS09510;Name=STY7866_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09510
NZ_CAAR01000235.1	Protein Homology	CDS	10904	11401	.	+	0	ID=cds-WP_000202965.1;Parent=gene-STY7866_RS09510;Dbxref=Genbank:WP_000202965.1;Name=WP_000202965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457610.1;locus_tag=STY7866_RS09510;product=M48 family metallopeptidase;protein_id=WP_000202965.1;transl_table=11
NZ_CAAR01000235.1	RefSeq	gene	11553	12245	.	+	.	ID=gene-STY7866_RS09515;Name=STY7866_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09515
NZ_CAAR01000235.1	Protein Homology	CDS	11553	12245	.	+	0	ID=cds-WP_000951045.1;Parent=gene-STY7866_RS09515;Dbxref=Genbank:WP_000951045.1;Name=WP_000951045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457611.1;locus_tag=STY7866_RS09515;product=vancomycin high temperature exclusion protein;protein_id=WP_000951045.1;transl_table=11
NZ_CAAR01000235.1	RefSeq	gene	12333	13331	.	+	.	ID=gene-STY7866_RS09520;Name=STY7866_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09520
NZ_CAAR01000235.1	Protein Homology	CDS	12333	13331	.	+	0	ID=cds-WP_024131215.1;Parent=gene-STY7866_RS09520;Dbxref=Genbank:WP_024131215.1;Name=WP_024131215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=STY7866_RS09520;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_024131215.1;transl_table=11
NZ_CAAR01000235.1	RefSeq	gene	13599	14567	.	+	.	ID=gene-STY7866_RS09525;Name=STY7866_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09525
NZ_CAAR01000235.1	Protein Homology	CDS	13599	14567	.	+	0	ID=cds-WP_001098788.1;Parent=gene-STY7866_RS09525;Dbxref=Genbank:WP_001098788.1;Name=WP_001098788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457613.1;locus_tag=STY7866_RS09525;product=TerC family protein;protein_id=WP_001098788.1;transl_table=11
NZ_CAAR01000235.1	RefSeq	pseudogene	14818	15028	.	+	.	ID=gene-STY7866_RS09530;Name=STY7866_RS09530;end_range=15028,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09530;partial=true;pseudo=true
NZ_CAAR01000235.1	Protein Homology	CDS	14818	15028	.	+	0	ID=cds-STY7866_RS09530;Parent=gene-STY7866_RS09530;Note=involved in the import of serine and threonine coupled with the import of sodium%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=15028,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457614.1;locus_tag=STY7866_RS09530;partial=true;product=serine/threonine transporter SstT;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000234.1 1 5475
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000234.1	RefSeq	region	1	5475	.	+	.	ID=NZ_CAAR01000234.1:1..5475;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000234.1	RefSeq	pseudogene	1	78	.	-	.	ID=gene-STY7866_RS27130;Name=STY7866_RS27130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27130;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000234.1	Protein Homology	CDS	1	78	.	-	0	ID=cds-STY7866_RS27130;Parent=gene-STY7866_RS27130;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455830.1;locus_tag=STY7866_RS27130;partial=true;product=TetR/AcrR family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000234.1	RefSeq	gene	156	869	.	+	.	ID=gene-STY7866_RS09440;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=STY7866_RS09440
NZ_CAAR01000234.1	Protein Homology	CDS	156	869	.	+	0	ID=cds-WP_000979081.1;Parent=gene-STY7866_RS09440;Dbxref=Genbank:WP_000979081.1;Name=WP_000979081.1;gbkey=CDS;gene=bdcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455829.1;locus_tag=STY7866_RS09440;product=SDR family oxidoreductase;protein_id=WP_000979081.1;transl_table=11
NZ_CAAR01000234.1	RefSeq	gene	960	1829	.	-	.	ID=gene-STY7866_RS09445;Name=STY7866_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09445
NZ_CAAR01000234.1	Protein Homology	CDS	960	1829	.	-	0	ID=cds-WP_000456775.1;Parent=gene-STY7866_RS09445;Dbxref=Genbank:WP_000456775.1;Name=WP_000456775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455828.1;locus_tag=STY7866_RS09445;product=aldo/keto reductase;protein_id=WP_000456775.1;transl_table=11
NZ_CAAR01000234.1	RefSeq	gene	2106	3011	.	-	.	ID=gene-STY7866_RS09450;Name=STY7866_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09450
NZ_CAAR01000234.1	Protein Homology	CDS	2106	3011	.	-	0	ID=cds-WP_000359197.1;Parent=gene-STY7866_RS09450;Dbxref=Genbank:WP_000359197.1;Name=WP_000359197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455827.1;locus_tag=STY7866_RS09450;product=LysR family transcriptional regulator;protein_id=WP_000359197.1;transl_table=11
NZ_CAAR01000234.1	RefSeq	gene	3130	4059	.	+	.	ID=gene-STY7866_RS09455;Name=STY7866_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09455
NZ_CAAR01000234.1	Protein Homology	CDS	3130	4059	.	+	0	ID=cds-WP_000814344.1;Parent=gene-STY7866_RS09455;Dbxref=Genbank:WP_000814344.1;Name=WP_000814344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455826.1;locus_tag=STY7866_RS09455;product=aromatic alcohol reductase;protein_id=WP_000814344.1;transl_table=11
NZ_CAAR01000234.1	RefSeq	gene	4156	5475	.	-	.	ID=gene-STY7866_RS09460;Name=STY7866_RS09460;end_range=5475,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09460;partial=true
NZ_CAAR01000234.1	Protein Homology	CDS	4156	5475	.	-	0	ID=cds-WP_000304838.1;Parent=gene-STY7866_RS09460;Dbxref=Genbank:WP_000304838.1;Name=WP_000304838.1;end_range=5475,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455825.1;locus_tag=STY7866_RS09460;partial=true;product=peptide ABC transporter substrate-binding protein;protein_id=WP_000304838.1;transl_table=11
##sequence-region NZ_CAAR01000233.1 1 2043
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000233.1	RefSeq	region	1	2043	.	+	.	ID=NZ_CAAR01000233.1:1..2043;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000233.1	RefSeq	pseudogene	26	424	.	+	.	ID=gene-STY7866_RS09425;Name=STY7866_RS09425;end_range=424,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09425;partial=true;pseudo=true
NZ_CAAR01000233.1	Protein Homology	CDS	26	424	.	+	0	ID=cds-STY7866_RS09425;Parent=gene-STY7866_RS09425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=424,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=STY7866_RS09425;partial=true;product=YdcF family protein;pseudo=true;transl_table=11
NZ_CAAR01000233.1	RefSeq	gene	500	1708	.	-	.	ID=gene-STY7866_RS09430;Name=STY7866_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09430
NZ_CAAR01000233.1	Protein Homology	CDS	500	1708	.	-	0	ID=cds-WP_001762563.1;Parent=gene-STY7866_RS09430;Dbxref=Genbank:WP_001762563.1;Name=WP_001762563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454711.1;locus_tag=STY7866_RS09430;product=IS200/IS605 family element transposase accessory protein TnpB;protein_id=WP_001762563.1;transl_table=11
NZ_CAAR01000233.1	RefSeq	gene	1728	2043	.	+	.	ID=gene-STY7866_RS09435;Name=STY7866_RS09435;end_range=2043,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09435;partial=true
NZ_CAAR01000233.1	Protein Homology	CDS	1728	2043	.	+	0	ID=cds-WP_049783575.1;Parent=gene-STY7866_RS09435;Dbxref=Genbank:WP_049783575.1;Name=WP_049783575.1;end_range=2043,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458342.1;locus_tag=STY7866_RS09435;partial=true;product=IS200/IS605-like element ISSen6 family transposase;protein_id=WP_049783575.1;transl_table=11
##sequence-region NZ_CAAR01000232.1 1 3755
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000232.1	RefSeq	region	1	3755	.	+	.	ID=NZ_CAAR01000232.1:1..3755;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000232.1	RefSeq	pseudogene	1	282	.	-	.	ID=gene-STY7866_RS09400;Name=STY7866_RS09400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09400;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000232.1	Protein Homology	CDS	1	282	.	-	0	ID=cds-STY7866_RS09400;Parent=gene-STY7866_RS09400;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=STY7866_RS09400;partial=true;product=cytoplasmic protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000232.1	RefSeq	gene	293	1288	.	-	.	ID=gene-STY7866_RS09405;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=STY7866_RS09405
NZ_CAAR01000232.1	Protein Homology	CDS	293	1288	.	-	0	ID=cds-WP_000145233.1;Parent=gene-STY7866_RS09405;Dbxref=Genbank:WP_000145233.1;Name=WP_000145233.1;gbkey=CDS;gene=tssG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454870.1;locus_tag=STY7866_RS09405;product=type VI secretion system baseplate subunit TssG;protein_id=WP_000145233.1;transl_table=11
NZ_CAAR01000232.1	RefSeq	gene	1285	3168	.	-	.	ID=gene-STY7866_RS09410;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=STY7866_RS09410
NZ_CAAR01000232.1	Protein Homology	CDS	1285	3168	.	-	0	ID=cds-WP_000371495.1;Parent=gene-STY7866_RS09410;Dbxref=Genbank:WP_000371495.1;Name=WP_000371495.1;gbkey=CDS;gene=tssF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454871.1;locus_tag=STY7866_RS09410;product=type VI secretion system baseplate subunit TssF;protein_id=WP_000371495.1;transl_table=11
NZ_CAAR01000232.1	RefSeq	gene	3184	3678	.	-	.	ID=gene-STY7866_RS09415;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=STY7866_RS09415
NZ_CAAR01000232.1	Protein Homology	CDS	3184	3678	.	-	0	ID=cds-WP_000108006.1;Parent=gene-STY7866_RS09415;Dbxref=Genbank:WP_000108006.1;Name=WP_000108006.1;gbkey=CDS;gene=tssE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454872.1;locus_tag=STY7866_RS09415;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000108006.1;transl_table=11
NZ_CAAR01000232.1	RefSeq	pseudogene	3675	3755	.	-	.	ID=gene-STY7866_RS27125;Name=STY7866_RS27125;end_range=3755,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27125;partial=true;pseudo=true
NZ_CAAR01000232.1	Protein Homology	CDS	3675	3755	.	-	0	ID=cds-STY7866_RS27125;Parent=gene-STY7866_RS27125;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3755,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454873.1;locus_tag=STY7866_RS27125;partial=true;product=impE family protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000231.1 1 5569
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000231.1	RefSeq	region	1	5569	.	+	.	ID=NZ_CAAR01000231.1:1..5569;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000231.1	RefSeq	gene	358	1548	.	+	.	ID=gene-STY7866_RS09380;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=STY7866_RS09380
NZ_CAAR01000231.1	Protein Homology	CDS	358	1548	.	+	0	ID=cds-WP_000883143.1;Parent=gene-STY7866_RS09380;Dbxref=Genbank:WP_000883143.1;Name=WP_000883143.1;gbkey=CDS;gene=hmpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457086.1;locus_tag=STY7866_RS09380;product=NO-inducible flavohemoprotein;protein_id=WP_000883143.1;transl_table=11
NZ_CAAR01000231.1	RefSeq	gene	1729	3273	.	+	.	ID=gene-STY7866_RS09385;Name=STY7866_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09385
NZ_CAAR01000231.1	Protein Homology	CDS	1729	3273	.	+	0	ID=cds-WP_001187128.1;Parent=gene-STY7866_RS09385;Dbxref=Genbank:WP_001187128.1;Name=WP_001187128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457087.1;locus_tag=STY7866_RS09385;product=CadC family transcriptional regulator;protein_id=WP_001187128.1;transl_table=11
NZ_CAAR01000231.1	RefSeq	gene	3622	4953	.	+	.	ID=gene-STY7866_RS09390;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=STY7866_RS09390
NZ_CAAR01000231.1	Protein Homology	CDS	3622	4953	.	+	0	ID=cds-WP_000100004.1;Parent=gene-STY7866_RS09390;Dbxref=Genbank:WP_000100004.1;Name=WP_000100004.1;gbkey=CDS;gene=cadB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457088.1;locus_tag=STY7866_RS09390;product=cadaverine/lysine antiporter;protein_id=WP_000100004.1;transl_table=11
NZ_CAAR01000231.1	RefSeq	pseudogene	5036	5569	.	+	.	ID=gene-STY7866_RS09395;Name=STY7866_RS09395;end_range=5569,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09395;partial=true;pseudo=true
NZ_CAAR01000231.1	Protein Homology	CDS	5036	5569	.	+	0	ID=cds-STY7866_RS09395;Parent=gene-STY7866_RS09395;Note=constitutive%3B catalyzes the formation of cadaverine from lysine%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5569,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457089.1;locus_tag=STY7866_RS09395;partial=true;product=lysine decarboxylase LdcC;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000230.1 1 6177
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000230.1	RefSeq	region	1	6177	.	+	.	ID=NZ_CAAR01000230.1:1..6177;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000230.1	RefSeq	gene	183	1388	.	+	.	ID=gene-STY7866_RS09345;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=STY7866_RS09345
NZ_CAAR01000230.1	Protein Homology	CDS	183	1388	.	+	0	ID=cds-WP_001681881.1;Parent=gene-STY7866_RS09345;Dbxref=Genbank:WP_001681881.1;Name=WP_001681881.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=STY7866_RS09345;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_001681881.1;transl_table=11
NZ_CAAR01000230.1	RefSeq	gene	1385	1618	.	+	.	ID=gene-STY7866_RS09350;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=STY7866_RS09350
NZ_CAAR01000230.1	Protein Homology	CDS	1385	1618	.	+	0	ID=cds-WP_000790506.1;Parent=gene-STY7866_RS09350;Dbxref=Genbank:WP_000790506.1;Name=WP_000790506.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=STY7866_RS09350;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790506.1;transl_table=11
NZ_CAAR01000230.1	RefSeq	gene	1883	2269	.	+	.	ID=gene-STY7866_RS09355;Name=STY7866_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09355
NZ_CAAR01000230.1	Protein Homology	CDS	1883	2269	.	+	0	ID=cds-WP_077905068.1;Parent=gene-STY7866_RS09355;Dbxref=Genbank:WP_077905068.1;Name=WP_077905068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=STY7866_RS09355;product=hypothetical protein;protein_id=WP_077905068.1;transl_table=11
NZ_CAAR01000230.1	RefSeq	gene	2389	2703	.	-	.	ID=gene-STY7866_RS09360;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=STY7866_RS09360
NZ_CAAR01000230.1	Protein Homology	CDS	2389	2703	.	-	0	ID=cds-WP_000719033.1;Parent=gene-STY7866_RS09360;Dbxref=Genbank:WP_000719033.1;Name=WP_000719033.1;gbkey=CDS;gene=fliE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456529.1;locus_tag=STY7866_RS09360;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000719033.1;transl_table=11
NZ_CAAR01000230.1	RefSeq	gene	2920	4602	.	+	.	ID=gene-STY7866_RS09365;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=STY7866_RS09365
NZ_CAAR01000230.1	Protein Homology	CDS	2920	4602	.	+	0	ID=cds-WP_001276827.1;Parent=gene-STY7866_RS09365;Dbxref=Genbank:WP_001276827.1;Name=WP_001276827.1;gbkey=CDS;gene=fliF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456530.1;locus_tag=STY7866_RS09365;product=flagellar basal body M-ring protein FliF;protein_id=WP_001276827.1;transl_table=11
NZ_CAAR01000230.1	RefSeq	gene	4595	5590	.	+	.	ID=gene-STY7866_RS09370;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=STY7866_RS09370
NZ_CAAR01000230.1	Protein Homology	CDS	4595	5590	.	+	0	ID=cds-WP_000067735.1;Parent=gene-STY7866_RS09370;Dbxref=Genbank:WP_000067735.1;Name=WP_000067735.1;gbkey=CDS;gene=fliG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456531.1;locus_tag=STY7866_RS09370;product=flagellar motor switch protein FliG;protein_id=WP_000067735.1;transl_table=11
NZ_CAAR01000230.1	RefSeq	gene	5583	6177	.	+	.	ID=gene-STY7866_RS09375;Name=fliH;end_range=6177,.;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=STY7866_RS09375;partial=true
NZ_CAAR01000230.1	Protein Homology	CDS	5583	6177	.	+	0	ID=cds-WP_000064156.1;Parent=gene-STY7866_RS09375;Dbxref=Genbank:WP_000064156.1;Name=WP_000064156.1;end_range=6177,.;gbkey=CDS;gene=fliH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456532.1;locus_tag=STY7866_RS09375;partial=true;product=flagellar assembly protein FliH;protein_id=WP_000064156.1;transl_table=11
##sequence-region NZ_CAAR01000229.1 1 31968
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000229.1	RefSeq	region	1	31968	.	+	.	ID=NZ_CAAR01000229.1:1..31968;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000229.1	RefSeq	gene	1	472	.	+	.	ID=gene-STY7866_RS09185;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=STY7866_RS09185;partial=true;start_range=.,1
NZ_CAAR01000229.1	Protein Homology	CDS	1	472	.	+	1	ID=cds-WP_000303812.1;Parent=gene-STY7866_RS09185;Dbxref=Genbank:WP_000303812.1;Name=WP_000303812.1;gbkey=CDS;gene=sspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=STY7866_RS09185;partial=true;product=stringent starvation protein A;protein_id=WP_000303812.1;start_range=.,1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	478	978	.	+	.	ID=gene-STY7866_RS09190;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=STY7866_RS09190
NZ_CAAR01000229.1	Protein Homology	CDS	478	978	.	+	0	ID=cds-WP_000366112.1;Parent=gene-STY7866_RS09190;Dbxref=Genbank:WP_000366112.1;Name=WP_000366112.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457719.1;locus_tag=STY7866_RS09190;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366112.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	1087	1878	.	+	.	ID=gene-STY7866_RS09195;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=STY7866_RS09195
NZ_CAAR01000229.1	Protein Homology	CDS	1087	1878	.	+	0	ID=cds-WP_000382926.1;Parent=gene-STY7866_RS09195;Dbxref=Genbank:WP_000382926.1;Name=WP_000382926.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457718.1;locus_tag=STY7866_RS09195;product=transcriptional regulator NanR;protein_id=WP_000382926.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	2013	2906	.	+	.	ID=gene-STY7866_RS09200;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=STY7866_RS09200
NZ_CAAR01000229.1	Protein Homology	CDS	2013	2906	.	+	0	ID=cds-WP_001029662.1;Parent=gene-STY7866_RS09200;Dbxref=Genbank:WP_001029662.1;Name=WP_001029662.1;gbkey=CDS;gene=nanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457717.1;locus_tag=STY7866_RS09200;product=N-acetylneuraminate lyase;protein_id=WP_001029662.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	3022	4512	.	+	.	ID=gene-STY7866_RS09205;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=STY7866_RS09205
NZ_CAAR01000229.1	Protein Homology	CDS	3022	4512	.	+	0	ID=cds-WP_000108069.1;Parent=gene-STY7866_RS09205;Dbxref=Genbank:WP_000108069.1;Name=WP_000108069.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457716.1;locus_tag=STY7866_RS09205;product=sialic acid transporter NanT;protein_id=WP_000108069.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	pseudogene	4559	5238	.	+	.	ID=gene-STY7866_RS09210;Name=STY7866_RS09210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09210;pseudo=true
NZ_CAAR01000229.1	Protein Homology	CDS	4559	5238	.	+	0	ID=cds-STY7866_RS09210;Parent=gene-STY7866_RS09210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=STY7866_RS09210;product=N-acetylmannosamine-6-phosphate 2-epimerase;pseudo=true;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	5235	6110	.	+	.	ID=gene-STY7866_RS09215;Name=STY7866_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09215
NZ_CAAR01000229.1	Protein Homology	CDS	5235	6110	.	+	0	ID=cds-WP_000208982.1;Parent=gene-STY7866_RS09215;Dbxref=Genbank:WP_000208982.1;Name=WP_000208982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457715.1;locus_tag=STY7866_RS09215;product=N-acetylmannosamine kinase;protein_id=WP_000208982.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	6107	6574	.	+	.	ID=gene-STY7866_RS09220;Name=STY7866_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09220
NZ_CAAR01000229.1	Protein Homology	CDS	6107	6574	.	+	0	ID=cds-WP_000979902.1;Parent=gene-STY7866_RS09220;Dbxref=Genbank:WP_000979902.1;Name=WP_000979902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457714.1;locus_tag=STY7866_RS09220;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000979902.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	6656	7936	.	-	.	ID=gene-STY7866_RS09225;Name=STY7866_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09225
NZ_CAAR01000229.1	Protein Homology	CDS	6656	7936	.	-	0	ID=cds-WP_001180693.1;Parent=gene-STY7866_RS09225;Dbxref=Genbank:WP_001180693.1;Name=WP_001180693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457713.1;locus_tag=STY7866_RS09225;product=cytosine deaminase;protein_id=WP_001180693.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	7923	9176	.	-	.	ID=gene-STY7866_RS09230;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=STY7866_RS09230
NZ_CAAR01000229.1	Protein Homology	CDS	7923	9176	.	-	0	ID=cds-WP_000076275.1;Parent=gene-STY7866_RS09230;Dbxref=Genbank:WP_000076275.1;Name=WP_000076275.1;gbkey=CDS;gene=codB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457712.1;locus_tag=STY7866_RS09230;product=cytosine permease;protein_id=WP_000076275.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	9293	10396	.	-	.	ID=gene-STY7866_RS09235;Name=STY7866_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09235
NZ_CAAR01000229.1	Protein Homology	CDS	9293	10396	.	-	0	ID=cds-WP_000184299.1;Parent=gene-STY7866_RS09235;Dbxref=Genbank:WP_000184299.1;Name=WP_000184299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457711.1;locus_tag=STY7866_RS09235;product=DUF1016 domain-containing protein;protein_id=WP_000184299.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	10604	12022	.	-	.	ID=gene-STY7866_RS09240;Name=STY7866_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09240
NZ_CAAR01000229.1	Protein Homology	CDS	10604	12022	.	-	0	ID=cds-WP_000081705.1;Parent=gene-STY7866_RS09240;Dbxref=Genbank:WP_000081705.1;Name=WP_000081705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=STY7866_RS09240;product=glutamate synthase subunit GltD;protein_id=WP_000081705.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	pseudogene	12032	16494	.	-	.	ID=gene-STY7866_RS09245;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=pseudogene;locus_tag=STY7866_RS09245;pseudo=true
NZ_CAAR01000229.1	Protein Homology	CDS	12032	16494	.	-	0	ID=cds-STY7866_RS09245;Parent=gene-STY7866_RS09245;Note=frameshifted;gbkey=CDS;gene=gltB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=STY7866_RS09245;product=glutamate synthase large subunit;pseudo=true;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	17166	18095	.	+	.	ID=gene-STY7866_RS09255;Name=STY7866_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09255
NZ_CAAR01000229.1	Protein Homology	CDS	17166	18095	.	+	0	ID=cds-WP_001176887.1;Parent=gene-STY7866_RS09255;Dbxref=Genbank:WP_001176887.1;Name=WP_001176887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457708.1;locus_tag=STY7866_RS09255;product=TIGR01212 family radical SAM protein;protein_id=WP_001176887.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	18188	20524	.	+	.	ID=gene-STY7866_RS09260;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=STY7866_RS09260
NZ_CAAR01000229.1	Protein Homology	CDS	18188	20524	.	+	0	ID=cds-WP_000809818.1;Parent=gene-STY7866_RS09260;Dbxref=Genbank:WP_000809818.1;Name=WP_000809818.1;gbkey=CDS;gene=arcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457707.1;locus_tag=STY7866_RS09260;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809818.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	20751	21404	.	+	.	ID=gene-STY7866_RS09265;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=STY7866_RS09265
NZ_CAAR01000229.1	Protein Homology	CDS	20751	21404	.	+	0	ID=cds-WP_000719819.1;Parent=gene-STY7866_RS09265;Dbxref=Genbank:WP_000719819.1;Name=WP_000719819.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457706.1;locus_tag=STY7866_RS09265;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_000719819.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	21401	22129	.	+	.	ID=gene-STY7866_RS09270;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=STY7866_RS09270
NZ_CAAR01000229.1	Protein Homology	CDS	21401	22129	.	+	0	ID=cds-WP_000044653.1;Parent=gene-STY7866_RS09270;Dbxref=Genbank:WP_000044653.1;Name=WP_000044653.1;gbkey=CDS;gene=mtgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457705.1;locus_tag=STY7866_RS09270;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000044653.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	22204	22836	.	-	.	ID=gene-STY7866_RS09275;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=STY7866_RS09275
NZ_CAAR01000229.1	Protein Homology	CDS	22204	22836	.	-	0	ID=cds-WP_000602196.1;Parent=gene-STY7866_RS09275;Dbxref=Genbank:WP_000602196.1;Name=WP_000602196.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457704.1;locus_tag=STY7866_RS09275;product=PhoP regulatory network protein YrbL;protein_id=WP_000602196.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	23081	23353	.	-	.	ID=gene-STY7866_RS09280;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=STY7866_RS09280
NZ_CAAR01000229.1	Protein Homology	CDS	23081	23353	.	-	0	ID=cds-WP_000216797.1;Parent=gene-STY7866_RS09280;Dbxref=Genbank:WP_000216797.1;Name=WP_000216797.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=STY7866_RS09280;product=PTS phosphocarrier protein NPr;protein_id=WP_000216797.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	23350	24204	.	-	.	ID=gene-STY7866_RS09285;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=STY7866_RS09285
NZ_CAAR01000229.1	Protein Homology	CDS	23350	24204	.	-	0	ID=cds-WP_000243749.1;Parent=gene-STY7866_RS09285;Dbxref=Genbank:WP_000243749.1;Name=WP_000243749.1;gbkey=CDS;gene=rapZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121329.1;locus_tag=STY7866_RS09285;product=RNase adapter RapZ;protein_id=WP_000243749.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	24250	24741	.	-	.	ID=gene-STY7866_RS09290;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=STY7866_RS09290
NZ_CAAR01000229.1	Protein Homology	CDS	24250	24741	.	-	0	ID=cds-WP_000609332.1;Parent=gene-STY7866_RS09290;Dbxref=Genbank:WP_000609332.1;Name=WP_000609332.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457701.1;locus_tag=STY7866_RS09290;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000609332.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	24859	25146	.	-	.	ID=gene-STY7866_RS09295;Name=STY7866_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09295
NZ_CAAR01000229.1	Protein Homology	CDS	24859	25146	.	-	0	ID=cds-WP_001176588.1;Parent=gene-STY7866_RS09295;Dbxref=Genbank:WP_001176588.1;Name=WP_001176588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007369896.1;locus_tag=STY7866_RS09295;product=ribosome hibernation promoting factor;protein_id=WP_001176588.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	25169	26602	.	-	.	ID=gene-STY7866_RS09300;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=STY7866_RS09300
NZ_CAAR01000229.1	Protein Homology	CDS	25169	26602	.	-	0	ID=cds-WP_000809020.1;Parent=gene-STY7866_RS09300;Dbxref=Genbank:WP_000809020.1;Name=WP_000809020.1;gbkey=CDS;gene=rpoN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=STY7866_RS09300;product=RNA polymerase factor sigma-54;protein_id=WP_000809020.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	26650	27375	.	-	.	ID=gene-STY7866_RS09305;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=STY7866_RS09305
NZ_CAAR01000229.1	Protein Homology	CDS	26650	27375	.	-	0	ID=cds-WP_000224104.1;Parent=gene-STY7866_RS09305;Dbxref=Genbank:WP_000224104.1;Name=WP_000224104.1;gbkey=CDS;gene=lptB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=STY7866_RS09305;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224104.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	27382	27936	.	-	.	ID=gene-STY7866_RS09310;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=STY7866_RS09310
NZ_CAAR01000229.1	Protein Homology	CDS	27382	27936	.	-	0	ID=cds-WP_000669770.1;Parent=gene-STY7866_RS09310;Dbxref=Genbank:WP_000669770.1;Name=WP_000669770.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=STY7866_RS09310;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669770.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	27905	28480	.	-	.	ID=gene-STY7866_RS09315;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=STY7866_RS09315
NZ_CAAR01000229.1	Protein Homology	CDS	27905	28480	.	-	0	ID=cds-WP_000047845.1;Parent=gene-STY7866_RS09315;Dbxref=Genbank:WP_000047845.1;Name=WP_000047845.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457696.1;locus_tag=STY7866_RS09315;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000047845.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	28477	29043	.	-	.	ID=gene-STY7866_RS09320;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=STY7866_RS09320
NZ_CAAR01000229.1	Protein Homology	CDS	28477	29043	.	-	0	ID=cds-WP_000030029.1;Parent=gene-STY7866_RS09320;Dbxref=Genbank:WP_000030029.1;Name=WP_000030029.1;gbkey=CDS;gene=kdsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457695.1;locus_tag=STY7866_RS09320;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030029.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	29064	30050	.	-	.	ID=gene-STY7866_RS09325;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=STY7866_RS09325
NZ_CAAR01000229.1	Protein Homology	CDS	29064	30050	.	-	0	ID=cds-WP_000018616.1;Parent=gene-STY7866_RS09325;Dbxref=Genbank:WP_000018616.1;Name=WP_000018616.1;gbkey=CDS;gene=kdsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457694.1;locus_tag=STY7866_RS09325;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_000018616.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	30064	31041	.	-	.	ID=gene-STY7866_RS09330;Name=STY7866_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09330
NZ_CAAR01000229.1	Protein Homology	CDS	30064	31041	.	-	0	ID=cds-WP_000922739.1;Parent=gene-STY7866_RS09330;Dbxref=Genbank:WP_000922739.1;Name=WP_000922739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457693.1;locus_tag=STY7866_RS09330;product=calcium/sodium antiporter;protein_id=WP_000922739.1;transl_table=11
NZ_CAAR01000229.1	RefSeq	gene	31254	31968	.	+	.	ID=gene-STY7866_RS09335;Name=mlaF;end_range=31968,.;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=STY7866_RS09335;partial=true
NZ_CAAR01000229.1	Protein Homology	CDS	31254	31968	.	+	0	ID=cds-WP_000531559.1;Parent=gene-STY7866_RS09335;Dbxref=Genbank:WP_000531559.1;Name=WP_000531559.1;end_range=31968,.;gbkey=CDS;gene=mlaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457692.1;locus_tag=STY7866_RS09335;partial=true;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000531559.1;transl_table=11
##sequence-region NZ_CAAR01000228.1 1 11113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000228.1	RefSeq	region	1	11113	.	+	.	ID=NZ_CAAR01000228.1:1..11113;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000228.1	RefSeq	gene	47	1186	.	+	.	ID=gene-STY7866_RS09145;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=STY7866_RS09145
NZ_CAAR01000228.1	Protein Homology	CDS	47	1186	.	+	0	ID=cds-WP_000811143.1;Parent=gene-STY7866_RS09145;Dbxref=Genbank:WP_000811143.1;Name=WP_000811143.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455251.1;locus_tag=STY7866_RS09145;product=tricarballylate utilization protein TcuB;protein_id=WP_000811143.1;transl_table=11
NZ_CAAR01000228.1	RefSeq	gene	1237	2541	.	+	.	ID=gene-STY7866_RS09150;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=STY7866_RS09150
NZ_CAAR01000228.1	Protein Homology	CDS	1237	2541	.	+	0	ID=cds-WP_000057014.1;Parent=gene-STY7866_RS09150;Dbxref=Genbank:WP_000057014.1;Name=WP_000057014.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455250.1;locus_tag=STY7866_RS09150;product=tricarballylate/proton symporter TcuC;protein_id=WP_000057014.1;transl_table=11
NZ_CAAR01000228.1	RefSeq	gene	2590	2922	.	-	.	ID=gene-STY7866_RS09155;Name=STY7866_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09155
NZ_CAAR01000228.1	Protein Homology	CDS	2590	2922	.	-	0	ID=cds-WP_000722260.1;Parent=gene-STY7866_RS09155;Dbxref=Genbank:WP_000722260.1;Name=WP_000722260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455249.1;locus_tag=STY7866_RS09155;product=lipoprotein;protein_id=WP_000722260.1;transl_table=11
NZ_CAAR01000228.1	RefSeq	gene	2972	4378	.	-	.	ID=gene-STY7866_RS09160;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=STY7866_RS09160
NZ_CAAR01000228.1	Protein Homology	CDS	2972	4378	.	-	0	ID=cds-WP_001258803.1;Parent=gene-STY7866_RS09160;Dbxref=Genbank:WP_001258803.1;Name=WP_001258803.1;gbkey=CDS;gene=chiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455248.1;locus_tag=STY7866_RS09160;product=chitoporin;protein_id=WP_001258803.1;transl_table=11
NZ_CAAR01000228.1	RefSeq	gene	4830	6497	.	-	.	ID=gene-STY7866_RS09165;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=STY7866_RS09165
NZ_CAAR01000228.1	Protein Homology	CDS	4830	6497	.	-	0	ID=cds-WP_001287188.1;Parent=gene-STY7866_RS09165;Dbxref=Genbank:WP_001287188.1;Name=WP_001287188.1;gbkey=CDS;gene=glnS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455247.1;locus_tag=STY7866_RS09165;product=glutamine--tRNA ligase;protein_id=WP_001287188.1;transl_table=11
NZ_CAAR01000228.1	RefSeq	gene	6708	8660	.	-	.	ID=gene-STY7866_RS09170;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=STY7866_RS09170
NZ_CAAR01000228.1	Protein Homology	CDS	6708	8660	.	-	0	ID=cds-WP_001023150.1;Parent=gene-STY7866_RS09170;Dbxref=Genbank:WP_001023150.1;Name=WP_001023150.1;gbkey=CDS;gene=nagE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455246.1;locus_tag=STY7866_RS09170;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_001023150.1;transl_table=11
NZ_CAAR01000228.1	RefSeq	gene	8987	9787	.	+	.	ID=gene-STY7866_RS09175;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=STY7866_RS09175
NZ_CAAR01000228.1	Protein Homology	CDS	8987	9787	.	+	0	ID=cds-WP_001237064.1;Parent=gene-STY7866_RS09175;Dbxref=Genbank:WP_001237064.1;Name=WP_001237064.1;gbkey=CDS;gene=nagB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=STY7866_RS09175;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237064.1;transl_table=11
NZ_CAAR01000228.1	RefSeq	gene	9847	11001	.	+	.	ID=gene-STY7866_RS09180;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=STY7866_RS09180
NZ_CAAR01000228.1	Protein Homology	CDS	9847	11001	.	+	0	ID=cds-WP_000271187.1;Parent=gene-STY7866_RS09180;Dbxref=Genbank:WP_000271187.1;Name=WP_000271187.1;gbkey=CDS;gene=nagA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455244.1;locus_tag=STY7866_RS09180;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000271187.1;transl_table=11
NZ_CAAR01000228.1	RefSeq	pseudogene	11006	11113	.	+	.	ID=gene-STY7866_RS27120;Name=STY7866_RS27120;end_range=11113,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27120;partial=true;pseudo=true
NZ_CAAR01000228.1	Protein Homology	CDS	11006	11113	.	+	0	ID=cds-STY7866_RS27120;Parent=gene-STY7866_RS27120;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=11113,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455243.1;locus_tag=STY7866_RS27120;partial=true;product=MarR family transcriptional regulator;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000227.1 1 268
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000227.1	RefSeq	region	1	268	.	+	.	ID=NZ_CAAR01000227.1:1..268;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000226.1 1 1056
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000226.1	RefSeq	region	1	1056	.	+	.	ID=NZ_CAAR01000226.1:1..1056;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000226.1	RefSeq	gene	1	120	.	-	.	ID=gene-STY7866_RS09135;Name=STY7866_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09135;partial=true;start_range=.,1
NZ_CAAR01000226.1	Protein Homology	CDS	1	120	.	-	0	ID=cds-WP_001764063.1;Parent=gene-STY7866_RS09135;Dbxref=Genbank:WP_001764063.1;Name=WP_001764063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457065.1;locus_tag=STY7866_RS09135;partial=true;product=DUF5066 family protein;protein_id=WP_001764063.1;start_range=.,1;transl_table=11
NZ_CAAR01000226.1	RefSeq	gene	367	1056	.	-	.	ID=gene-STY7866_RS09140;Name=sseA;end_range=1056,.;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=STY7866_RS09140;partial=true
NZ_CAAR01000226.1	Protein Homology	CDS	367	1056	.	-	0	ID=cds-WP_000385903.1;Parent=gene-STY7866_RS09140;Dbxref=Genbank:WP_000385903.1;Name=WP_000385903.1;end_range=1056,.;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457064.1;locus_tag=STY7866_RS09140;partial=true;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000385903.1;transl_table=11
##sequence-region NZ_CAAR01000225.1 1 3347
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000225.1	RefSeq	region	1	3347	.	+	.	ID=NZ_CAAR01000225.1:1..3347;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000225.1	RefSeq	pseudogene	1	155	.	-	.	ID=gene-STY7866_RS27110;Name=STY7866_RS27110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27110;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000225.1	Protein Homology	CDS	1	155	.	-	0	ID=cds-STY7866_RS27110;Parent=gene-STY7866_RS27110;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001326362.1;locus_tag=STY7866_RS27110;partial=true;product=phosphoribosylglycinamide synthetase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000225.1	RefSeq	gene	180	410	.	+	.	ID=gene-STY7866_RS09110;Name=STY7866_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09110
NZ_CAAR01000225.1	Protein Homology	CDS	180	410	.	+	0	ID=cds-WP_001764061.1;Parent=gene-STY7866_RS09110;Dbxref=Genbank:WP_001764061.1;Name=WP_001764061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669324.1;locus_tag=STY7866_RS09110;product=hypothetical protein;protein_id=WP_001764061.1;transl_table=11
NZ_CAAR01000225.1	RefSeq	gene	411	1838	.	+	.	ID=gene-STY7866_RS09115;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=STY7866_RS09115
NZ_CAAR01000225.1	Protein Homology	CDS	411	1838	.	+	0	ID=cds-WP_000734247.1;Parent=gene-STY7866_RS09115;Dbxref=Genbank:WP_000734247.1;Name=WP_000734247.1;gbkey=CDS;gene=mltF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734247.1;locus_tag=STY7866_RS09115;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734247.1;transl_table=11
NZ_CAAR01000225.1	RefSeq	gene	2006	2557	.	-	.	ID=gene-STY7866_RS09120;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=STY7866_RS09120
NZ_CAAR01000225.1	Protein Homology	CDS	2006	2557	.	-	0	ID=cds-WP_001134566.1;Parent=gene-STY7866_RS09120;Dbxref=Genbank:WP_001134566.1;Name=WP_001134566.1;gbkey=CDS;gene=tadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457097.1;locus_tag=STY7866_RS09120;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001134566.1;transl_table=11
NZ_CAAR01000225.1	RefSeq	gene	2582	3217	.	-	.	ID=gene-STY7866_RS09125;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=STY7866_RS09125
NZ_CAAR01000225.1	Protein Homology	CDS	2582	3217	.	-	0	ID=cds-WP_000253562.1;Parent=gene-STY7866_RS09125;Dbxref=Genbank:WP_000253562.1;Name=WP_000253562.1;gbkey=CDS;gene=yfhb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457098.1;locus_tag=STY7866_RS09125;product=phosphatidylglycerophosphatase C;protein_id=WP_000253562.1;transl_table=11
NZ_CAAR01000225.1	RefSeq	pseudogene	3221	3347	.	-	.	ID=gene-STY7866_RS27115;Name=STY7866_RS27115;end_range=3347,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27115;partial=true;pseudo=true
NZ_CAAR01000225.1	Protein Homology	CDS	3221	3347	.	-	1	ID=cds-STY7866_RS27115;Parent=gene-STY7866_RS27115;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3347,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457099.1;locus_tag=STY7866_RS27115;partial=true;product=PTS N-acetylmuramic acid IIB subunit / PTS N-acetylmuramic acid IIC subunit;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000224.1 1 1833
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000224.1	RefSeq	region	1	1833	.	+	.	ID=NZ_CAAR01000224.1:1..1833;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000224.1	RefSeq	gene	1	752	.	-	.	ID=gene-STY7866_RS09090;Name=STY7866_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09090;partial=true;start_range=.,1
NZ_CAAR01000224.1	Protein Homology	CDS	1	752	.	-	0	ID=cds-WP_001764059.1;Parent=gene-STY7866_RS09090;Dbxref=Genbank:WP_001764059.1;Name=WP_001764059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457078.1;locus_tag=STY7866_RS09090;partial=true;product=alpha/beta hydrolase;protein_id=WP_001764059.1;start_range=.,1;transl_table=11
NZ_CAAR01000224.1	RefSeq	gene	897	1700	.	-	.	ID=gene-STY7866_RS09095;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=STY7866_RS09095
NZ_CAAR01000224.1	Protein Homology	CDS	897	1700	.	-	0	ID=cds-WP_000553464.1;Parent=gene-STY7866_RS09095;Dbxref=Genbank:WP_000553464.1;Name=WP_000553464.1;gbkey=CDS;gene=suhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=STY7866_RS09095;product=inositol-1-monophosphatase;protein_id=WP_000553464.1;transl_table=11
##sequence-region NZ_CAAR01000223.1 1 6666
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000223.1	RefSeq	region	1	6666	.	+	.	ID=NZ_CAAR01000223.1:1..6666;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000223.1	RefSeq	gene	1	758	.	+	.	ID=gene-STY7866_RS09060;Name=STY7866_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09060;partial=true;start_range=.,1
NZ_CAAR01000223.1	Protein Homology	CDS	1	758	.	+	2	ID=cds-WP_000292900.1;Parent=gene-STY7866_RS09060;Dbxref=Genbank:WP_000292900.1;Name=WP_000292900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456300.1;locus_tag=STY7866_RS09060;partial=true;product=hydrogenase expression/formation protein;protein_id=WP_000292900.1;start_range=.,1;transl_table=11
NZ_CAAR01000223.1	RefSeq	gene	833	2377	.	+	.	ID=gene-STY7866_RS09065;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=STY7866_RS09065
NZ_CAAR01000223.1	Protein Homology	CDS	833	2377	.	+	0	ID=cds-WP_000263597.1;Parent=gene-STY7866_RS09065;Dbxref=Genbank:WP_000263597.1;Name=WP_000263597.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456301.1;locus_tag=STY7866_RS09065;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263597.1;transl_table=11
NZ_CAAR01000223.1	RefSeq	gene	2389	3525	.	+	.	ID=gene-STY7866_RS09070;Name=STY7866_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09070
NZ_CAAR01000223.1	Protein Homology	CDS	2389	3525	.	+	0	ID=cds-WP_000888121.1;Parent=gene-STY7866_RS09070;Dbxref=Genbank:WP_000888121.1;Name=WP_000888121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456302.1;locus_tag=STY7866_RS09070;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000888121.1;transl_table=11
NZ_CAAR01000223.1	RefSeq	gene	3538	3627	.	+	.	ID=gene-STY7866_RS09075;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=STY7866_RS09075
NZ_CAAR01000223.1	Protein Homology	CDS	3538	3627	.	+	0	ID=cds-WP_000270306.1;Parent=gene-STY7866_RS09075;Dbxref=Genbank:WP_000270306.1;Name=WP_000270306.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=STY7866_RS09075;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270306.1;transl_table=11
NZ_CAAR01000223.1	RefSeq	gene	4128	5297	.	+	.	ID=gene-STY7866_RS09080;Name=STY7866_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09080
NZ_CAAR01000223.1	Protein Homology	CDS	4128	5297	.	+	0	ID=cds-WP_000380369.1;Parent=gene-STY7866_RS09080;Dbxref=Genbank:WP_000380369.1;Name=WP_000380369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015702904.1;locus_tag=STY7866_RS09080;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WP_000380369.1;transl_table=11
NZ_CAAR01000223.1	RefSeq	pseudogene	5511	6653	.	+	.	ID=gene-STY7866_RS09085;Name=treA;end_range=6653,.;gbkey=Gene;gene=treA;gene_biotype=pseudogene;locus_tag=STY7866_RS09085;partial=true;pseudo=true
NZ_CAAR01000223.1	Protein Homology	CDS	5511	6653	.	+	0	ID=cds-STY7866_RS09085;Parent=gene-STY7866_RS09085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=6653,.;gbkey=CDS;gene=treA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586371.1;locus_tag=STY7866_RS09085;partial=true;product=alpha%2Calpha-trehalase TreA;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000222.1 1 2529
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000222.1	RefSeq	region	1	2529	.	+	.	ID=NZ_CAAR01000222.1:1..2529;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000222.1	RefSeq	pseudogene	1	1102	.	+	.	ID=gene-STY7866_RS09045;Name=STY7866_RS09045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS09045;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000222.1	Protein Homology	CDS	1	1102	.	+	1	ID=cds-STY7866_RS09045;Parent=gene-STY7866_RS09045;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458381.1;locus_tag=STY7866_RS09045;partial=true;product=glycogen debranching enzyme;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000222.1	RefSeq	gene	1117	2412	.	+	.	ID=gene-STY7866_RS09050;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=STY7866_RS09050
NZ_CAAR01000222.1	Protein Homology	CDS	1117	2412	.	+	0	ID=cds-WP_000253993.1;Parent=gene-STY7866_RS09050;Dbxref=Genbank:WP_000253993.1;Name=WP_000253993.1;gbkey=CDS;gene=glgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458382.1;locus_tag=STY7866_RS09050;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253993.1;transl_table=11
NZ_CAAR01000222.1	RefSeq	gene	2412	2529	.	+	.	ID=gene-STY7866_RS27105;Name=STY7866_RS27105;end_range=2529,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27105;partial=true
NZ_CAAR01000222.1	Protein Homology	CDS	2412	2529	.	+	0	ID=cds-WP_001764057.1;Parent=gene-STY7866_RS27105;Dbxref=Genbank:WP_001764057.1;Name=WP_001764057.1;end_range=2529,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458383.1;locus_tag=STY7866_RS27105;partial=true;product=glycogen synthase;protein_id=WP_001764057.1;transl_table=11
##sequence-region NZ_CAAR01000221.1 1 10989
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000221.1	RefSeq	region	1	10989	.	+	.	ID=NZ_CAAR01000221.1:1..10989;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000221.1	RefSeq	pseudogene	1	478	.	-	.	ID=gene-STY7866_RS08980;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=pseudogene;locus_tag=STY7866_RS08980;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000221.1	Protein Homology	CDS	1	478	.	-	0	ID=cds-STY7866_RS08980;Parent=gene-STY7866_RS08980;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=pdxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=STY7866_RS08980;partial=true;product=pyridoxine/pyridoxal/pyridoxamine kinase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000221.1	RefSeq	gene	561	1853	.	+	.	ID=gene-STY7866_RS08985;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=STY7866_RS08985
NZ_CAAR01000221.1	Protein Homology	CDS	561	1853	.	+	0	ID=cds-WP_000565130.1;Parent=gene-STY7866_RS08985;Dbxref=Genbank:WP_000565130.1;Name=WP_000565130.1;gbkey=CDS;gene=ptsJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456972.1;locus_tag=STY7866_RS08985;product=transcriptional regulator PtsJ;protein_id=WP_000565130.1;transl_table=11
NZ_CAAR01000221.1	RefSeq	gene	1868	2587	.	+	.	ID=gene-STY7866_RS08990;Name=STY7866_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08990
NZ_CAAR01000221.1	Protein Homology	CDS	1868	2587	.	+	0	ID=cds-WP_001263738.1;Parent=gene-STY7866_RS08990;Dbxref=Genbank:WP_001263738.1;Name=WP_001263738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456973.1;locus_tag=STY7866_RS08990;product=GMP synthase;protein_id=WP_001263738.1;transl_table=11
NZ_CAAR01000221.1	RefSeq	gene	2646	3023	.	+	.	ID=gene-STY7866_RS08995;Name=STY7866_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08995
NZ_CAAR01000221.1	Protein Homology	CDS	2646	3023	.	+	0	ID=cds-WP_000710735.1;Parent=gene-STY7866_RS08995;Dbxref=Genbank:WP_000710735.1;Name=WP_000710735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456974.1;locus_tag=STY7866_RS08995;product=YfeK family protein;protein_id=WP_000710735.1;transl_table=11
NZ_CAAR01000221.1	RefSeq	gene	3056	3967	.	-	.	ID=gene-STY7866_RS09000;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=STY7866_RS09000
NZ_CAAR01000221.1	Protein Homology	CDS	3056	3967	.	-	0	ID=cds-WP_001093881.1;Parent=gene-STY7866_RS09000;Dbxref=Genbank:WP_001093881.1;Name=WP_001093881.1;gbkey=CDS;gene=cysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456975.1;locus_tag=STY7866_RS09000;product=cysteine synthase CysM;protein_id=WP_001093881.1;transl_table=11
NZ_CAAR01000221.1	RefSeq	gene	4088	5182	.	-	.	ID=gene-STY7866_RS09005;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=STY7866_RS09005
NZ_CAAR01000221.1	Protein Homology	CDS	4088	5182	.	-	0	ID=cds-WP_000021072.1;Parent=gene-STY7866_RS09005;Dbxref=Genbank:WP_000021072.1;Name=WP_000021072.1;gbkey=CDS;gene=cysA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456976.1;locus_tag=STY7866_RS09005;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021072.1;transl_table=11
NZ_CAAR01000221.1	RefSeq	gene	5172	6047	.	-	.	ID=gene-STY7866_RS09010;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=STY7866_RS09010
NZ_CAAR01000221.1	Protein Homology	CDS	5172	6047	.	-	0	ID=cds-WP_000852703.1;Parent=gene-STY7866_RS09010;Dbxref=Genbank:WP_000852703.1;Name=WP_000852703.1;gbkey=CDS;gene=cysW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456977.1;locus_tag=STY7866_RS09010;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852703.1;transl_table=11
NZ_CAAR01000221.1	RefSeq	gene	6047	6880	.	-	.	ID=gene-STY7866_RS09015;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=STY7866_RS09015
NZ_CAAR01000221.1	Protein Homology	CDS	6047	6880	.	-	0	ID=cds-WP_000881746.1;Parent=gene-STY7866_RS09015;Dbxref=Genbank:WP_000881746.1;Name=WP_000881746.1;gbkey=CDS;gene=cysT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=STY7866_RS09015;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000881746.1;transl_table=11
NZ_CAAR01000221.1	RefSeq	gene	6880	7896	.	-	.	ID=gene-STY7866_RS09020;Name=STY7866_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09020
NZ_CAAR01000221.1	Protein Homology	CDS	6880	7896	.	-	0	ID=cds-WP_000290266.1;Parent=gene-STY7866_RS09020;Dbxref=Genbank:WP_000290266.1;Name=WP_000290266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121936.1;locus_tag=STY7866_RS09020;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_000290266.1;transl_table=11
NZ_CAAR01000221.1	RefSeq	gene	8054	8845	.	-	.	ID=gene-STY7866_RS09025;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=STY7866_RS09025
NZ_CAAR01000221.1	Protein Homology	CDS	8054	8845	.	-	0	ID=cds-WP_000517460.1;Parent=gene-STY7866_RS09025;Dbxref=Genbank:WP_000517460.1;Name=WP_000517460.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456980.1;locus_tag=STY7866_RS09025;product=SDR family oxidoreductase UcpA;protein_id=WP_000517460.1;transl_table=11
NZ_CAAR01000221.1	RefSeq	gene	9082	9981	.	-	.	ID=gene-STY7866_RS09030;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=STY7866_RS09030
NZ_CAAR01000221.1	Protein Homology	CDS	9082	9981	.	-	0	ID=cds-WP_000084583.1;Parent=gene-STY7866_RS09030;Dbxref=Genbank:WP_000084583.1;Name=WP_000084583.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456981.1;locus_tag=STY7866_RS09030;product=porphyrinogen peroxidase;protein_id=WP_000084583.1;transl_table=11
NZ_CAAR01000221.1	RefSeq	gene	10076	10651	.	-	.	ID=gene-STY7866_RS09035;Name=STY7866_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09035
NZ_CAAR01000221.1	Protein Homology	CDS	10076	10651	.	-	0	ID=cds-WP_000838971.1;Parent=gene-STY7866_RS09035;Dbxref=Genbank:WP_000838971.1;Name=WP_000838971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456982.1;locus_tag=STY7866_RS09035;product=RpoE-regulated lipoprotein;protein_id=WP_000838971.1;transl_table=11
NZ_CAAR01000221.1	RefSeq	gene	10713	10989	.	-	.	ID=gene-STY7866_RS09040;Name=STY7866_RS09040;end_range=10989,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS09040;partial=true
NZ_CAAR01000221.1	Protein Homology	CDS	10713	10989	.	-	1	ID=cds-WP_001764056.1;Parent=gene-STY7866_RS09040;Dbxref=Genbank:WP_001764056.1;Name=WP_001764056.1;end_range=10989,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121926.1;locus_tag=STY7866_RS09040;partial=true;product=DUF2919 family protein;protein_id=WP_001764056.1;transl_table=11
##sequence-region NZ_CAAR01000220.1 1 5379
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000220.1	RefSeq	region	1	5379	.	+	.	ID=NZ_CAAR01000220.1:1..5379;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000220.1	RefSeq	gene	1	516	.	+	.	ID=gene-STY7866_RS08950;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=STY7866_RS08950;partial=true;start_range=.,1
NZ_CAAR01000220.1	Protein Homology	CDS	1	516	.	+	0	ID=cds-WP_000299334.1;Parent=gene-STY7866_RS08950;Dbxref=Genbank:WP_000299334.1;Name=WP_000299334.1;gbkey=CDS;gene=purC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457021.1;locus_tag=STY7866_RS08950;partial=true;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_000299334.1;start_range=.,1;transl_table=11
NZ_CAAR01000220.1	RefSeq	pseudogene	648	1512	.	+	.	ID=gene-STY7866_RS08955;Name=STY7866_RS08955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS08955;pseudo=true
NZ_CAAR01000220.1	Protein Homology	CDS	648	1512	.	+	0	ID=cds-STY7866_RS08955;Parent=gene-STY7866_RS08955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457020.1;locus_tag=STY7866_RS08955;product=neutral zinc metallopeptidase;pseudo=true;transl_table=11
NZ_CAAR01000220.1	RefSeq	gene	1528	3546	.	+	.	ID=gene-STY7866_RS08960;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=STY7866_RS08960
NZ_CAAR01000220.1	Protein Homology	CDS	1528	3546	.	+	0	ID=cds-WP_001279842.1;Parent=gene-STY7866_RS08960;Dbxref=Genbank:WP_001279842.1;Name=WP_001279842.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457019.1;locus_tag=STY7866_RS08960;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_001279842.1;transl_table=11
NZ_CAAR01000220.1	RefSeq	gene	3573	3773	.	-	.	ID=gene-STY7866_RS08965;Name=STY7866_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08965
NZ_CAAR01000220.1	Protein Homology	CDS	3573	3773	.	-	0	ID=cds-WP_000383839.1;Parent=gene-STY7866_RS08965;Dbxref=Genbank:WP_000383839.1;Name=WP_000383839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457018.1;locus_tag=STY7866_RS08965;product=YpfN family protein;protein_id=WP_000383839.1;transl_table=11
NZ_CAAR01000220.1	RefSeq	gene	3801	4928	.	-	.	ID=gene-STY7866_RS08970;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=STY7866_RS08970
NZ_CAAR01000220.1	Protein Homology	CDS	3801	4928	.	-	0	ID=cds-WP_001277830.1;Parent=gene-STY7866_RS08970;Dbxref=Genbank:WP_001277830.1;Name=WP_001277830.1;gbkey=CDS;gene=dapE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=STY7866_RS08970;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277830.1;transl_table=11
NZ_CAAR01000220.1	RefSeq	gene	4932	5288	.	-	.	ID=gene-STY7866_RS08975;Name=STY7866_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08975
NZ_CAAR01000220.1	Protein Homology	CDS	4932	5288	.	-	0	ID=cds-WP_000631925.1;Parent=gene-STY7866_RS08975;Dbxref=Genbank:WP_000631925.1;Name=WP_000631925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457016.1;locus_tag=STY7866_RS08975;product=ArsC family reductase;protein_id=WP_000631925.1;transl_table=11
##sequence-region NZ_CAAR01000219.1 1 15424
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000219.1	RefSeq	region	1	15424	.	+	.	ID=NZ_CAAR01000219.1:1..15424;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000219.1	RefSeq	gene	1	1086	.	-	.	ID=gene-STY7866_RS08860;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=STY7866_RS08860;partial=true;start_range=.,1
NZ_CAAR01000219.1	Protein Homology	CDS	1	1086	.	-	0	ID=cds-WP_001764051.1;Parent=gene-STY7866_RS08860;Dbxref=Genbank:WP_001764051.1;Name=WP_001764051.1;gbkey=CDS;gene=mdtG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455648.1;locus_tag=STY7866_RS08860;partial=true;product=multidrug efflux MFS transporter MdtG;protein_id=WP_001764051.1;start_range=.,1;transl_table=11
NZ_CAAR01000219.1	RefSeq	gene	1241	2161	.	-	.	ID=gene-STY7866_RS08865;Name=STY7866_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08865
NZ_CAAR01000219.1	Protein Homology	CDS	1241	2161	.	-	0	ID=cds-WP_000163974.1;Parent=gene-STY7866_RS08865;Dbxref=Genbank:WP_000163974.1;Name=WP_000163974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455649.1;locus_tag=STY7866_RS08865;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee;protein_id=WP_000163974.1;transl_table=11
NZ_CAAR01000219.1	RefSeq	gene	2381	3433	.	+	.	ID=gene-STY7866_RS08870;Name=STY7866_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08870
NZ_CAAR01000219.1	Protein Homology	CDS	2381	3433	.	+	0	ID=cds-WP_001144640.1;Parent=gene-STY7866_RS08870;Dbxref=Genbank:WP_001144640.1;Name=WP_001144640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455650.1;locus_tag=STY7866_RS08870;product=rhodanese-related sulfurtransferase;protein_id=WP_001144640.1;transl_table=11
NZ_CAAR01000219.1	RefSeq	gene	3485	4060	.	-	.	ID=gene-STY7866_RS08875;Name=STY7866_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08875
NZ_CAAR01000219.1	Protein Homology	CDS	3485	4060	.	-	0	ID=cds-WP_000739886.1;Parent=gene-STY7866_RS08875;Dbxref=Genbank:WP_000739886.1;Name=WP_000739886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455651.1;locus_tag=STY7866_RS08875;product=YceI family protein;protein_id=WP_000739886.1;transl_table=11
NZ_CAAR01000219.1	RefSeq	pseudogene	4057	4629	.	-	.	ID=gene-STY7866_RS08880;Name=STY7866_RS08880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS08880;pseudo=true
NZ_CAAR01000219.1	Protein Homology	CDS	4057	4629	.	-	0	ID=cds-STY7866_RS08880;Parent=gene-STY7866_RS08880;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=STY7866_RS08880;product=cytochrome b;pseudo=true;transl_table=11
NZ_CAAR01000219.1	RefSeq	gene	4892	5005	.	-	.	ID=gene-STY7866_RS08885;Name=STY7866_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08885
NZ_CAAR01000219.1	Protein Homology	CDS	4892	5005	.	-	0	ID=cds-WP_001253282.1;Parent=gene-STY7866_RS08885;Dbxref=Genbank:WP_001253282.1;Name=WP_001253282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455652.1;locus_tag=STY7866_RS08885;product=DUF2770 domain-containing protein;protein_id=WP_001253282.1;transl_table=11
NZ_CAAR01000219.1	RefSeq	gene	5046	6164	.	-	.	ID=gene-STY7866_RS08890;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=STY7866_RS08890
NZ_CAAR01000219.1	Protein Homology	CDS	5046	6164	.	-	0	ID=cds-WP_000872781.1;Parent=gene-STY7866_RS08890;Dbxref=Genbank:WP_000872781.1;Name=WP_000872781.1;gbkey=CDS;gene=solA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455653.1;locus_tag=STY7866_RS08890;product=N-methyl-L-tryptophan oxidase;protein_id=WP_000872781.1;transl_table=11
NZ_CAAR01000219.1	RefSeq	gene	6277	6531	.	-	.	ID=gene-STY7866_RS08895;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=STY7866_RS08895
NZ_CAAR01000219.1	Protein Homology	CDS	6277	6531	.	-	0	ID=cds-WP_000414440.1;Parent=gene-STY7866_RS08895;Dbxref=Genbank:WP_000414440.1;Name=WP_000414440.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=STY7866_RS08895;product=biofilm formation regulator BssS;protein_id=WP_000414440.1;transl_table=11
NZ_CAAR01000219.1	RefSeq	gene	6821	7066	.	-	.	ID=gene-STY7866_RS08900;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=STY7866_RS08900
NZ_CAAR01000219.1	Protein Homology	CDS	6821	7066	.	-	0	ID=cds-WP_001217768.1;Parent=gene-STY7866_RS08900;Dbxref=Genbank:WP_001217768.1;Name=WP_001217768.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455655.1;locus_tag=STY7866_RS08900;product=DNA damage-inducible protein I;protein_id=WP_001217768.1;transl_table=11
NZ_CAAR01000219.1	RefSeq	gene	7140	8186	.	-	.	ID=gene-STY7866_RS08905;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=STY7866_RS08905
NZ_CAAR01000219.1	Protein Homology	CDS	7140	8186	.	-	0	ID=cds-WP_000126592.1;Parent=gene-STY7866_RS08905;Dbxref=Genbank:WP_000126592.1;Name=WP_000126592.1;gbkey=CDS;gene=pyrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455656.1;locus_tag=STY7866_RS08905;product=dihydroorotase;protein_id=WP_000126592.1;transl_table=11
NZ_CAAR01000219.1	RefSeq	gene	8290	8889	.	-	.	ID=gene-STY7866_RS08910;Name=STY7866_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08910
NZ_CAAR01000219.1	Protein Homology	CDS	8290	8889	.	-	0	ID=cds-WP_000088637.1;Parent=gene-STY7866_RS08910;Dbxref=Genbank:WP_000088637.1;Name=WP_000088637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129069.1;locus_tag=STY7866_RS08910;product=lipoprotein;protein_id=WP_000088637.1;transl_table=11
NZ_CAAR01000219.1	RefSeq	gene	8974	9573	.	-	.	ID=gene-STY7866_RS08915;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=STY7866_RS08915
NZ_CAAR01000219.1	Protein Homology	CDS	8974	9573	.	-	0	ID=cds-WP_001574520.1;Parent=gene-STY7866_RS08915;Dbxref=Genbank:WP_001574520.1;Name=WP_001574520.1;gbkey=CDS;gene=grxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210267.1;locus_tag=STY7866_RS08915;product=glutaredoxin 2;protein_id=WP_001574520.1;transl_table=11
NZ_CAAR01000219.1	RefSeq	gene	9687	10895	.	-	.	ID=gene-STY7866_RS08920;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=STY7866_RS08920
NZ_CAAR01000219.1	Protein Homology	CDS	9687	10895	.	-	0	ID=cds-WP_000092167.1;Parent=gene-STY7866_RS08920;Dbxref=Genbank:WP_000092167.1;Name=WP_000092167.1;gbkey=CDS;gene=mdtH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455659.1;locus_tag=STY7866_RS08920;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092167.1;transl_table=11
NZ_CAAR01000219.1	RefSeq	gene	11132	11716	.	+	.	ID=gene-STY7866_RS08925;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=STY7866_RS08925
NZ_CAAR01000219.1	Protein Homology	CDS	11132	11716	.	+	0	ID=cds-WP_000468201.1;Parent=gene-STY7866_RS08925;Dbxref=Genbank:WP_000468201.1;Name=WP_000468201.1;gbkey=CDS;gene=rimJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455660.1;locus_tag=STY7866_RS08925;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468201.1;transl_table=11
NZ_CAAR01000219.1	RefSeq	gene	11752	12399	.	+	.	ID=gene-STY7866_RS08930;Name=STY7866_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08930
NZ_CAAR01000219.1	Protein Homology	CDS	11752	12399	.	+	0	ID=cds-WP_000873047.1;Parent=gene-STY7866_RS08930;Dbxref=Genbank:WP_000873047.1;Name=WP_000873047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455661.1;locus_tag=STY7866_RS08930;product=YceH family protein;protein_id=WP_000873047.1;transl_table=11
NZ_CAAR01000219.1	RefSeq	gene	12401	13324	.	+	.	ID=gene-STY7866_RS08935;Name=STY7866_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08935
NZ_CAAR01000219.1	Protein Homology	CDS	12401	13324	.	+	0	ID=cds-WP_001259737.1;Parent=gene-STY7866_RS08935;Dbxref=Genbank:WP_001259737.1;Name=WP_001259737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455662.1;locus_tag=STY7866_RS08935;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_001259737.1;transl_table=11
NZ_CAAR01000219.1	RefSeq	gene	13628	15163	.	+	.	ID=gene-STY7866_RS08940;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=STY7866_RS08940
NZ_CAAR01000219.1	Protein Homology	CDS	13628	15163	.	+	0	ID=cds-WP_001764055.1;Parent=gene-STY7866_RS08940;Dbxref=Genbank:WP_001764055.1;Name=WP_001764055.1;gbkey=CDS;gene=murJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129059.1;locus_tag=STY7866_RS08940;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001764055.1;transl_table=11
NZ_CAAR01000219.1	RefSeq	gene	15245	15424	.	-	.	ID=gene-STY7866_RS08945;Name=STY7866_RS08945;end_range=15424,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08945;partial=true
NZ_CAAR01000219.1	Protein Homology	CDS	15245	15424	.	-	0	ID=cds-WP_000316190.1;Parent=gene-STY7866_RS08945;Dbxref=Genbank:WP_000316190.1;Name=WP_000316190.1;end_range=15424,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455664.1;locus_tag=STY7866_RS08945;partial=true;product=hypothetical protein;protein_id=WP_000316190.1;transl_table=11
##sequence-region NZ_CAAR01000218.1 1 1423
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000218.1	RefSeq	region	1	1423	.	+	.	ID=NZ_CAAR01000218.1:1..1423;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000218.1	RefSeq	gene	1	1423	.	+	.	ID=gene-STY7866_RS08855;Name=STY7866_RS08855;end_range=1423,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08855;partial=true;start_range=.,1
NZ_CAAR01000218.1	Protein Homology	CDS	1	1423	.	+	0	ID=cds-WP_000385526.1;Parent=gene-STY7866_RS08855;Dbxref=Genbank:WP_000385526.1;Name=WP_000385526.1;end_range=1423,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454907.1;locus_tag=STY7866_RS08855;partial=true;product=fimbria/pilus outer membrane usher protein;protein_id=WP_000385526.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000217.1 1 2141
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000217.1	RefSeq	region	1	2141	.	+	.	ID=NZ_CAAR01000217.1:1..2141;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000217.1	RefSeq	pseudogene	39	114	.	-	.	ID=gene-STY7866_RS27100;Name=STY7866_RS27100;end_range=114,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27100;partial=true;pseudo=true
NZ_CAAR01000217.1	Protein Homology	CDS	39	114	.	-	0	ID=cds-STY7866_RS27100;Parent=gene-STY7866_RS27100;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=114,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455554.1;locus_tag=STY7866_RS27100;partial=true;product=MsgA-like protein;pseudo=true;transl_table=11
NZ_CAAR01000217.1	RefSeq	gene	519	887	.	-	.	ID=gene-STY7866_RS08840;Name=STY7866_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08840
NZ_CAAR01000217.1	Protein Homology	CDS	519	887	.	-	0	ID=cds-WP_001764048.1;Parent=gene-STY7866_RS08840;Dbxref=Genbank:WP_001764048.1;Name=WP_001764048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525027.1;locus_tag=STY7866_RS08840;product=tyrosine-type recombinase/integrase;protein_id=WP_001764048.1;transl_table=11
NZ_CAAR01000217.1	RefSeq	pseudogene	1011	2141	.	+	.	ID=gene-STY7866_RS08850;Name=STY7866_RS08850;end_range=2141,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS08850;partial=true;pseudo=true
NZ_CAAR01000217.1	Protein Homology	CDS	1011	2141	.	+	0	ID=cds-STY7866_RS08850;Parent=gene-STY7866_RS08850;Note=internal stop%3B incomplete%3B missing C-terminus;end_range=2141,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=STY7866_RS08850;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000216.1 1 3720
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000216.1	RefSeq	region	1	3720	.	+	.	ID=NZ_CAAR01000216.1:1..3720;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000216.1	RefSeq	gene	165	1172	.	-	.	ID=gene-STY7866_RS08820;Name=STY7866_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08820
NZ_CAAR01000216.1	Protein Homology	CDS	165	1172	.	-	0	ID=cds-WP_000050806.1;Parent=gene-STY7866_RS08820;Dbxref=Genbank:WP_000050806.1;Name=WP_000050806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456784.1;locus_tag=STY7866_RS08820;product=nucleoid-associated protein YejK;protein_id=WP_000050806.1;transl_table=11
NZ_CAAR01000216.1	RefSeq	gene	1352	1579	.	+	.	ID=gene-STY7866_RS08825;Name=STY7866_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08825
NZ_CAAR01000216.1	Protein Homology	CDS	1352	1579	.	+	0	ID=cds-WP_001135904.1;Parent=gene-STY7866_RS08825;Dbxref=Genbank:WP_001135904.1;Name=WP_001135904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456785.1;locus_tag=STY7866_RS08825;product=YejL family protein;protein_id=WP_001135904.1;transl_table=11
NZ_CAAR01000216.1	RefSeq	gene	1611	3371	.	+	.	ID=gene-STY7866_RS08830;Name=pbgA;gbkey=Gene;gene=pbgA;gene_biotype=protein_coding;locus_tag=STY7866_RS08830
NZ_CAAR01000216.1	Protein Homology	CDS	1611	3371	.	+	0	ID=cds-WP_000256150.1;Parent=gene-STY7866_RS08830;Dbxref=Genbank:WP_000256150.1;Name=WP_000256150.1;gbkey=CDS;gene=pbgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=STY7866_RS08830;product=cardiolipin transport protein PbgA;protein_id=WP_000256150.1;transl_table=11
NZ_CAAR01000216.1	RefSeq	gene	3445	3521	.	+	.	ID=gene-STY7866_RS08835;Name=STY7866_RS08835;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS08835
NZ_CAAR01000216.1	tRNAscan-SE	tRNA	3445	3521	.	+	.	ID=rna-STY7866_RS08835;Parent=gene-STY7866_RS08835;anticodon=(pos:3479..3481);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS08835;product=tRNA-Pro
NZ_CAAR01000216.1	tRNAscan-SE	exon	3445	3521	.	+	.	ID=exon-STY7866_RS08835-1;Parent=rna-STY7866_RS08835;anticodon=(pos:3479..3481);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS08835;product=tRNA-Pro
##sequence-region NZ_CAAR01000215.1 1 5188
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000215.1	RefSeq	region	1	5188	.	+	.	ID=NZ_CAAR01000215.1:1..5188;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000215.1	RefSeq	pseudogene	1	122	.	+	.	ID=gene-STY7866_RS27095;Name=STY7866_RS27095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27095;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000215.1	Protein Homology	CDS	1	122	.	+	2	ID=cds-STY7866_RS27095;Parent=gene-STY7866_RS27095;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456546.1;locus_tag=STY7866_RS27095;partial=true;product=mannosyl-3-phosphoglycerate phosphatase-related protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000215.1	RefSeq	gene	101	1804	.	-	.	ID=gene-STY7866_RS08785;Name=yedQ;gbkey=Gene;gene=yedQ;gene_biotype=protein_coding;locus_tag=STY7866_RS08785
NZ_CAAR01000215.1	Protein Homology	CDS	101	1804	.	-	0	ID=cds-WP_001119838.1;Parent=gene-STY7866_RS08785;Dbxref=Genbank:WP_001119838.1;Name=WP_001119838.1;gbkey=CDS;gene=yedQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=STY7866_RS08785;product=cellulose biosynthesis regulator YedQ;protein_id=WP_001119838.1;transl_table=11
NZ_CAAR01000215.1	RefSeq	pseudogene	2230	3141	.	-	.	ID=gene-STY7866_RS08795;Name=STY7866_RS08795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS08795;pseudo=true
NZ_CAAR01000215.1	Protein Homology	CDS	2230	3141	.	-	0	ID=cds-STY7866_RS08795;Parent=gene-STY7866_RS08795;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460940.1;locus_tag=STY7866_RS08795;product=DUF808 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000215.1	RefSeq	gene	3317	4237	.	+	.	ID=gene-STY7866_RS08800;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=STY7866_RS08800
NZ_CAAR01000215.1	Protein Homology	CDS	3317	4237	.	+	0	ID=cds-WP_001212262.1;Parent=gene-STY7866_RS08800;Dbxref=Genbank:WP_001212262.1;Name=WP_001212262.1;gbkey=CDS;gene=yedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456549.1;locus_tag=STY7866_RS08800;product=drug/metabolite exporter YedA;protein_id=WP_001212262.1;transl_table=11
NZ_CAAR01000215.1	RefSeq	gene	4226	4696	.	-	.	ID=gene-STY7866_RS08805;Name=STY7866_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08805
NZ_CAAR01000215.1	Protein Homology	CDS	4226	4696	.	-	0	ID=cds-WP_000785981.1;Parent=gene-STY7866_RS08805;Dbxref=Genbank:WP_000785981.1;Name=WP_000785981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456550.1;locus_tag=STY7866_RS08805;product=very short patch repair endonuclease;protein_id=WP_000785981.1;transl_table=11
NZ_CAAR01000215.1	RefSeq	pseudogene	4677	5188	.	-	.	ID=gene-STY7866_RS08810;Name=STY7866_RS08810;end_range=5188,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS08810;partial=true;pseudo=true
NZ_CAAR01000215.1	Protein Homology	CDS	4677	5188	.	-	2	ID=cds-STY7866_RS08810;Parent=gene-STY7866_RS08810;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5188,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456551.1;locus_tag=STY7866_RS08810;partial=true;product=DNA (cytosine-5-)-methyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000214.1 1 4716
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000214.1	RefSeq	region	1	4716	.	+	.	ID=NZ_CAAR01000214.1:1..4716;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000214.1	RefSeq	gene	1	960	.	-	.	ID=gene-STY7866_RS08750;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=STY7866_RS08750;partial=true;start_range=.,1
NZ_CAAR01000214.1	Protein Homology	CDS	1	960	.	-	0	ID=cds-WP_000502814.1;Parent=gene-STY7866_RS08750;Dbxref=Genbank:WP_000502814.1;Name=WP_000502814.1;gbkey=CDS;gene=fliM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=STY7866_RS08750;partial=true;product=flagellar motor switch protein FliM;protein_id=WP_000502814.1;start_range=.,1;transl_table=11
NZ_CAAR01000214.1	RefSeq	gene	965	1432	.	-	.	ID=gene-STY7866_RS08755;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=STY7866_RS08755
NZ_CAAR01000214.1	Protein Homology	CDS	965	1432	.	-	0	ID=cds-WP_000132172.1;Parent=gene-STY7866_RS08755;Dbxref=Genbank:WP_000132172.1;Name=WP_000132172.1;gbkey=CDS;gene=fliL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456536.1;locus_tag=STY7866_RS08755;product=flagellar basal body-associated protein FliL;protein_id=WP_000132172.1;transl_table=11
NZ_CAAR01000214.1	RefSeq	gene	1537	2766	.	-	.	ID=gene-STY7866_RS08760;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=STY7866_RS08760
NZ_CAAR01000214.1	Protein Homology	CDS	1537	2766	.	-	0	ID=cds-WP_000631663.1;Parent=gene-STY7866_RS08760;Dbxref=Genbank:WP_000631663.1;Name=WP_000631663.1;gbkey=CDS;gene=fliK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456535.1;locus_tag=STY7866_RS08760;product=flagellar hook length control protein FliK;protein_id=WP_000631663.1;transl_table=11
NZ_CAAR01000214.1	RefSeq	gene	2763	3206	.	-	.	ID=gene-STY7866_RS08765;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=STY7866_RS08765
NZ_CAAR01000214.1	Protein Homology	CDS	2763	3206	.	-	0	ID=cds-WP_000046981.1;Parent=gene-STY7866_RS08765;Dbxref=Genbank:WP_000046981.1;Name=WP_000046981.1;gbkey=CDS;gene=fliJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456534.1;locus_tag=STY7866_RS08765;product=flagella biosynthesis chaperone FliJ;protein_id=WP_000046981.1;transl_table=11
NZ_CAAR01000214.1	RefSeq	gene	3228	4598	.	-	.	ID=gene-STY7866_RS08770;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=STY7866_RS08770
NZ_CAAR01000214.1	Protein Homology	CDS	3228	4598	.	-	0	ID=cds-WP_000213259.1;Parent=gene-STY7866_RS08770;Dbxref=Genbank:WP_000213259.1;Name=WP_000213259.1;gbkey=CDS;gene=fliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456533.1;locus_tag=STY7866_RS08770;product=flagellum-specific ATP synthase FliI;protein_id=WP_000213259.1;transl_table=11
NZ_CAAR01000214.1	RefSeq	pseudogene	4598	4716	.	-	.	ID=gene-STY7866_RS08775;Name=fliH;end_range=4716,.;gbkey=Gene;gene=fliH;gene_biotype=pseudogene;locus_tag=STY7866_RS08775;partial=true;pseudo=true
NZ_CAAR01000214.1	Protein Homology	CDS	4598	4716	.	-	2	ID=cds-STY7866_RS08775;Parent=gene-STY7866_RS08775;Note=binds to and inhibits the function of flagella specific ATPase FliI%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4716,.;gbkey=CDS;gene=fliH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456532.1;locus_tag=STY7866_RS08775;partial=true;product=flagellar assembly protein FliH;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000213.1 1 6257
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000213.1	RefSeq	region	1	6257	.	+	.	ID=NZ_CAAR01000213.1:1..6257;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000213.1	RefSeq	pseudogene	47	683	.	+	.	ID=gene-STY7866_RS08705;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=pseudogene;locus_tag=STY7866_RS08705;pseudo=true
NZ_CAAR01000213.1	Protein Homology	CDS	47	683	.	+	0	ID=cds-STY7866_RS08705;Parent=gene-STY7866_RS08705;Note=frameshifted;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457689.1;locus_tag=STY7866_RS08705;product=phospholipid-binding protein MlaC;pseudo=true;transl_table=11
NZ_CAAR01000213.1	RefSeq	gene	683	979	.	+	.	ID=gene-STY7866_RS08710;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=STY7866_RS08710
NZ_CAAR01000213.1	Protein Homology	CDS	683	979	.	+	0	ID=cds-WP_000188843.1;Parent=gene-STY7866_RS08710;Dbxref=Genbank:WP_000188843.1;Name=WP_000188843.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457688.1;locus_tag=STY7866_RS08710;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000188843.1;transl_table=11
NZ_CAAR01000213.1	RefSeq	gene	1167	1421	.	+	.	ID=gene-STY7866_RS08715;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=STY7866_RS08715
NZ_CAAR01000213.1	Protein Homology	CDS	1167	1421	.	+	0	ID=cds-WP_001518349.1;Parent=gene-STY7866_RS08715;Dbxref=Genbank:WP_001518349.1;Name=WP_001518349.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585657.1;locus_tag=STY7866_RS08715;product=BolA family iron metabolism protein IbaG;protein_id=WP_001518349.1;transl_table=11
NZ_CAAR01000213.1	RefSeq	gene	1475	2734	.	+	.	ID=gene-STY7866_RS08720;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=STY7866_RS08720
NZ_CAAR01000213.1	Protein Homology	CDS	1475	2734	.	+	0	ID=cds-WP_000357288.1;Parent=gene-STY7866_RS08720;Dbxref=Genbank:WP_000357288.1;Name=WP_000357288.1;gbkey=CDS;gene=murA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457686.1;locus_tag=STY7866_RS08720;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357288.1;transl_table=11
NZ_CAAR01000213.1	RefSeq	gene	2793	3080	.	-	.	ID=gene-STY7866_RS08725;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=STY7866_RS08725
NZ_CAAR01000213.1	Protein Homology	CDS	2793	3080	.	-	0	ID=cds-WP_000444167.1;Parent=gene-STY7866_RS08725;Dbxref=Genbank:WP_000444167.1;Name=WP_000444167.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457685.1;locus_tag=STY7866_RS08725;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000444167.1;transl_table=11
NZ_CAAR01000213.1	RefSeq	gene	3313	4284	.	-	.	ID=gene-STY7866_RS08730;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=STY7866_RS08730
NZ_CAAR01000213.1	Protein Homology	CDS	3313	4284	.	-	0	ID=cds-WP_001047354.1;Parent=gene-STY7866_RS08730;Dbxref=Genbank:WP_001047354.1;Name=WP_001047354.1;gbkey=CDS;gene=ispB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457684.1;locus_tag=STY7866_RS08730;product=octaprenyl diphosphate synthase;protein_id=WP_001047354.1;transl_table=11
NZ_CAAR01000213.1	RefSeq	gene	4544	4855	.	+	.	ID=gene-STY7866_RS08735;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=STY7866_RS08735
NZ_CAAR01000213.1	Protein Homology	CDS	4544	4855	.	+	0	ID=cds-WP_000271396.1;Parent=gene-STY7866_RS08735;Dbxref=Genbank:WP_000271396.1;Name=WP_000271396.1;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=STY7866_RS08735;product=50S ribosomal protein L21;protein_id=WP_000271396.1;transl_table=11
NZ_CAAR01000213.1	RefSeq	gene	4875	5132	.	+	.	ID=gene-STY7866_RS08740;Name=STY7866_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08740
NZ_CAAR01000213.1	Protein Homology	CDS	4875	5132	.	+	0	ID=cds-WP_000940593.1;Parent=gene-STY7866_RS08740;Dbxref=Genbank:WP_000940593.1;Name=WP_000940593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007369914.1;locus_tag=STY7866_RS08740;product=50S ribosomal protein L27;protein_id=WP_000940593.1;transl_table=11
NZ_CAAR01000213.1	RefSeq	gene	5262	6227	.	+	.	ID=gene-STY7866_RS08745;Name=STY7866_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08745
NZ_CAAR01000213.1	Protein Homology	CDS	5262	6227	.	+	0	ID=cds-WP_000813052.1;Parent=gene-STY7866_RS08745;Dbxref=Genbank:WP_000813052.1;Name=WP_000813052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=STY7866_RS08745;product=DMT family transporter;protein_id=WP_000813052.1;transl_table=11
##sequence-region NZ_CAAR01000212.1 1 14557
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000212.1	RefSeq	region	1	14557	.	+	.	ID=NZ_CAAR01000212.1:1..14557;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000212.1	RefSeq	pseudogene	1	1204	.	+	.	ID=gene-STY7866_RS08640;Name=STY7866_RS08640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS08640;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000212.1	Protein Homology	CDS	1	1204	.	+	2	ID=cds-STY7866_RS08640;Parent=gene-STY7866_RS08640;Note=cleaves DNA 25 basepairs downstream from the recognition site%3B frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=STY7866_RS08640;partial=true;product=type III restriction endonuclease subunit R;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000212.1	RefSeq	gene	1480	1581	.	+	.	ID=gene-STY7866_RS08645;Name=STY7866_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08645
NZ_CAAR01000212.1	Protein Homology	CDS	1480	1581	.	+	0	ID=cds-WP_000934834.1;Parent=gene-STY7866_RS08645;Dbxref=Genbank:WP_000934834.1;Name=WP_000934834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=STY7866_RS08645;product=hypothetical protein;protein_id=WP_000934834.1;transl_table=11
NZ_CAAR01000212.1	RefSeq	gene	1696	3099	.	+	.	ID=gene-STY7866_RS08650;Name=STY7866_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08650
NZ_CAAR01000212.1	Protein Homology	CDS	1696	3099	.	+	0	ID=cds-WP_000393706.1;Parent=gene-STY7866_RS08650;Dbxref=Genbank:WP_000393706.1;Name=WP_000393706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454955.1;locus_tag=STY7866_RS08650;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000393706.1;transl_table=11
NZ_CAAR01000212.1	RefSeq	gene	3096	4106	.	+	.	ID=gene-STY7866_RS08655;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=STY7866_RS08655
NZ_CAAR01000212.1	Protein Homology	CDS	3096	4106	.	+	0	ID=cds-WP_000151052.1;Parent=gene-STY7866_RS08655;Dbxref=Genbank:WP_000151052.1;Name=WP_000151052.1;gbkey=CDS;gene=cydB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454956.1;locus_tag=STY7866_RS08655;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000151052.1;transl_table=11
NZ_CAAR01000212.1	RefSeq	gene	4106	4237	.	+	.	ID=gene-STY7866_RS08660;Name=STY7866_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08660
NZ_CAAR01000212.1	Protein Homology	CDS	4106	4237	.	+	0	ID=cds-WP_000241458.1;Parent=gene-STY7866_RS08660;Dbxref=Genbank:WP_000241458.1;Name=WP_000241458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.2;locus_tag=STY7866_RS08660;product=DUF2474 domain-containing protein;protein_id=WP_000241458.1;transl_table=11
NZ_CAAR01000212.1	RefSeq	gene	4443	5447	.	+	.	ID=gene-STY7866_RS08665;Name=STY7866_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08665
NZ_CAAR01000212.1	Protein Homology	CDS	4443	5447	.	+	0	ID=cds-WP_000074609.1;Parent=gene-STY7866_RS08665;Dbxref=Genbank:WP_000074609.1;Name=WP_000074609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454958.1;locus_tag=STY7866_RS08665;product=helix-turn-helix domain-containing protein;protein_id=WP_000074609.1;transl_table=11
NZ_CAAR01000212.1	RefSeq	gene	5593	7701	.	+	.	ID=gene-STY7866_RS08670;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=STY7866_RS08670
NZ_CAAR01000212.1	Protein Homology	CDS	5593	7701	.	+	0	ID=cds-WP_100208312.1;Parent=gene-STY7866_RS08670;Dbxref=Genbank:WP_100208312.1;Name=WP_100208312.1;gbkey=CDS;gene=foxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=STY7866_RS08670;product=ferrioxamine B receptor FoxA;protein_id=WP_100208312.1;transl_table=11
NZ_CAAR01000212.1	RefSeq	gene	7742	8374	.	-	.	ID=gene-STY7866_RS08675;Name=STY7866_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08675
NZ_CAAR01000212.1	Protein Homology	CDS	7742	8374	.	-	0	ID=cds-WP_000433130.1;Parent=gene-STY7866_RS08675;Dbxref=Genbank:WP_000433130.1;Name=WP_000433130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454960.1;locus_tag=STY7866_RS08675;product=LysE family transporter;protein_id=WP_000433130.1;transl_table=11
NZ_CAAR01000212.1	RefSeq	gene	8606	8881	.	+	.	ID=gene-STY7866_RS08680;Name=STY7866_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08680
NZ_CAAR01000212.1	Protein Homology	CDS	8606	8881	.	+	0	ID=cds-WP_000848026.1;Parent=gene-STY7866_RS08680;Dbxref=Genbank:WP_000848026.1;Name=WP_000848026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454961.1;locus_tag=STY7866_RS08680;product=DUF1471 domain-containing protein;protein_id=WP_000848026.1;transl_table=11
NZ_CAAR01000212.1	RefSeq	gene	9017	10642	.	-	.	ID=gene-STY7866_RS08685;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=STY7866_RS08685
NZ_CAAR01000212.1	Protein Homology	CDS	9017	10642	.	-	0	ID=cds-WP_000205290.1;Parent=gene-STY7866_RS08685;Dbxref=Genbank:WP_000205290.1;Name=WP_000205290.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454962.1;locus_tag=STY7866_RS08685;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_000205290.1;transl_table=11
NZ_CAAR01000212.1	RefSeq	gene	10908	11795	.	+	.	ID=gene-STY7866_RS08690;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=STY7866_RS08690
NZ_CAAR01000212.1	Protein Homology	CDS	10908	11795	.	+	0	ID=cds-WP_000052221.1;Parent=gene-STY7866_RS08690;Dbxref=Genbank:WP_000052221.1;Name=WP_000052221.1;gbkey=CDS;gene=prpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454963.1;locus_tag=STY7866_RS08690;product=methylisocitrate lyase;protein_id=WP_000052221.1;transl_table=11
NZ_CAAR01000212.1	RefSeq	gene	11918	13087	.	+	.	ID=gene-STY7866_RS08695;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=STY7866_RS08695
NZ_CAAR01000212.1	Protein Homology	CDS	11918	13087	.	+	0	ID=cds-WP_000132750.1;Parent=gene-STY7866_RS08695;Dbxref=Genbank:WP_000132750.1;Name=WP_000132750.1;gbkey=CDS;gene=prpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454964.1;locus_tag=STY7866_RS08695;product=2-methylcitrate synthase;protein_id=WP_000132750.1;transl_table=11
NZ_CAAR01000212.1	RefSeq	gene	13125	14557	.	+	.	ID=gene-STY7866_RS08700;Name=STY7866_RS08700;end_range=14557,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08700;partial=true
NZ_CAAR01000212.1	Protein Homology	CDS	13125	14557	.	+	0	ID=cds-WP_001764044.1;Parent=gene-STY7866_RS08700;Dbxref=Genbank:WP_001764044.1;Name=WP_001764044.1;end_range=14557,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454965.1;locus_tag=STY7866_RS08700;partial=true;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_001764044.1;transl_table=11
##sequence-region NZ_CAAR01000211.1 1 762
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000211.1	RefSeq	region	1	762	.	+	.	ID=NZ_CAAR01000211.1:1..762;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000211.1	RefSeq	pseudogene	169	705	.	+	.	ID=gene-STY7866_RS08635;Name=STY7866_RS08635;end_range=705,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS08635;partial=true;pseudo=true
NZ_CAAR01000211.1	Protein Homology	CDS	169	705	.	+	0	ID=cds-STY7866_RS08635;Parent=gene-STY7866_RS08635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=705,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458922.1;locus_tag=STY7866_RS08635;partial=true;product=HNH endonuclease;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000210.1 1 989
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000210.1	RefSeq	region	1	989	.	+	.	ID=NZ_CAAR01000210.1:1..989;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000210.1	RefSeq	gene	1	964	.	+	.	ID=gene-STY7866_RS08625;Name=STY7866_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08625;partial=true;start_range=.,1
NZ_CAAR01000210.1	Protein Homology	CDS	1	964	.	+	1	ID=cds-WP_000314180.1;Parent=gene-STY7866_RS08625;Dbxref=Genbank:WP_000314180.1;Name=WP_000314180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458743.1;locus_tag=STY7866_RS08625;partial=true;product=ATP-binding domain-containing protein;protein_id=WP_000314180.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000209.1 1 17316
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000209.1	RefSeq	region	1	17316	.	+	.	ID=NZ_CAAR01000209.1:1..17316;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000209.1	RefSeq	pseudogene	1	166	.	-	.	ID=gene-STY7866_RS08480;Name=STY7866_RS08480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS08480;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000209.1	Protein Homology	CDS	1	166	.	-	0	ID=cds-STY7866_RS08480;Parent=gene-STY7866_RS08480;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456249.1;locus_tag=STY7866_RS08480;partial=true;product=four-helix bundle copper-binding protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000209.1	RefSeq	gene	360	1493	.	+	.	ID=gene-STY7866_RS08485;Name=STY7866_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08485
NZ_CAAR01000209.1	Protein Homology	CDS	360	1493	.	+	0	ID=cds-WP_000456065.1;Parent=gene-STY7866_RS08485;Dbxref=Genbank:WP_000456065.1;Name=WP_000456065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456250.1;locus_tag=STY7866_RS08485;product=mechanosensitive ion channel family protein;protein_id=WP_000456065.1;transl_table=11
NZ_CAAR01000209.1	RefSeq	gene	1575	2165	.	-	.	ID=gene-STY7866_RS08490;Name=STY7866_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08490
NZ_CAAR01000209.1	Protein Homology	CDS	1575	2165	.	-	0	ID=cds-WP_000947464.1;Parent=gene-STY7866_RS08490;Dbxref=Genbank:WP_000947464.1;Name=WP_000947464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456251.1;locus_tag=STY7866_RS08490;product=ATP-binding cassette domain-containing protein;protein_id=WP_000947464.1;transl_table=11
NZ_CAAR01000209.1	RefSeq	gene	2159	2956	.	-	.	ID=gene-STY7866_RS08495;Name=STY7866_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08495
NZ_CAAR01000209.1	Protein Homology	CDS	2159	2956	.	-	0	ID=cds-WP_000950217.1;Parent=gene-STY7866_RS08495;Dbxref=Genbank:WP_000950217.1;Name=WP_000950217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456252.1;locus_tag=STY7866_RS08495;product=ATP-binding cassette domain-containing protein;protein_id=WP_000950217.1;transl_table=11
NZ_CAAR01000209.1	RefSeq	gene	2950	3762	.	-	.	ID=gene-STY7866_RS08500;Name=STY7866_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08500
NZ_CAAR01000209.1	Protein Homology	CDS	2950	3762	.	-	0	ID=cds-WP_000966645.1;Parent=gene-STY7866_RS08500;Dbxref=Genbank:WP_000966645.1;Name=WP_000966645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456253.1;locus_tag=STY7866_RS08500;product=ABC transporter permease;protein_id=WP_000966645.1;transl_table=11
NZ_CAAR01000209.1	RefSeq	gene	3752	4726	.	-	.	ID=gene-STY7866_RS08505;Name=STY7866_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08505
NZ_CAAR01000209.1	Protein Homology	CDS	3752	4726	.	-	0	ID=cds-WP_001520270.1;Parent=gene-STY7866_RS08505;Dbxref=Genbank:WP_001520270.1;Name=WP_001520270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=STY7866_RS08505;product=ABC transporter permease;protein_id=WP_001520270.1;transl_table=11
NZ_CAAR01000209.1	RefSeq	gene	4726	6360	.	-	.	ID=gene-STY7866_RS08510;Name=STY7866_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08510
NZ_CAAR01000209.1	Protein Homology	CDS	4726	6360	.	-	0	ID=cds-WP_000946074.1;Parent=gene-STY7866_RS08510;Dbxref=Genbank:WP_000946074.1;Name=WP_000946074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456255.1;locus_tag=STY7866_RS08510;product=ABC transporter substrate-binding protein;protein_id=WP_000946074.1;transl_table=11
NZ_CAAR01000209.1	RefSeq	gene	7064	7378	.	+	.	ID=gene-STY7866_RS08515;Name=STY7866_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08515
NZ_CAAR01000209.1	Protein Homology	CDS	7064	7378	.	+	0	ID=cds-WP_000182479.1;Parent=gene-STY7866_RS08515;Dbxref=Genbank:WP_000182479.1;Name=WP_000182479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456256.1;locus_tag=STY7866_RS08515;product=hypothetical protein;protein_id=WP_000182479.1;transl_table=11
NZ_CAAR01000209.1	RefSeq	pseudogene	7527	8055	.	+	.	ID=gene-STY7866_RS08520;Name=STY7866_RS08520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS08520;pseudo=true
NZ_CAAR01000209.1	Protein Homology	CDS	7527	8055	.	+	0	ID=cds-STY7866_RS08520;Parent=gene-STY7866_RS08520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456257.1;locus_tag=STY7866_RS08520;product=cytochrome b;pseudo=true;transl_table=11
NZ_CAAR01000209.1	RefSeq	gene	8138	9181	.	-	.	ID=gene-STY7866_RS08525;Name=STY7866_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08525
NZ_CAAR01000209.1	Protein Homology	CDS	8138	9181	.	-	0	ID=cds-WP_000761736.1;Parent=gene-STY7866_RS08525;Dbxref=Genbank:WP_000761736.1;Name=WP_000761736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456258.1;locus_tag=STY7866_RS08525;product=exo-alpha-sialidase;protein_id=WP_000761736.1;transl_table=11
NZ_CAAR01000209.1	RefSeq	gene	9519	9989	.	-	.	ID=gene-STY7866_RS08535;Name=STY7866_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08535
NZ_CAAR01000209.1	Protein Homology	CDS	9519	9989	.	-	0	ID=cds-WP_001518864.1;Parent=gene-STY7866_RS08535;Dbxref=Genbank:WP_001518864.1;Name=WP_001518864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456260.1;locus_tag=STY7866_RS08535;product=Hsp20 family protein;protein_id=WP_001518864.1;transl_table=11
NZ_CAAR01000209.1	RefSeq	gene	10184	10411	.	-	.	ID=gene-STY7866_RS08540;Name=STY7866_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08540
NZ_CAAR01000209.1	Protein Homology	CDS	10184	10411	.	-	0	ID=cds-WP_000927830.1;Parent=gene-STY7866_RS08540;Dbxref=Genbank:WP_000927830.1;Name=WP_000927830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=STY7866_RS08540;product=hypothetical protein;protein_id=WP_000927830.1;transl_table=11
NZ_CAAR01000209.1	RefSeq	gene	10611	10736	.	-	.	ID=gene-STY7866_RS08545;Name=STY7866_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08545
NZ_CAAR01000209.1	Protein Homology	CDS	10611	10736	.	-	0	ID=cds-WP_000758947.1;Parent=gene-STY7866_RS08545;Dbxref=Genbank:WP_000758947.1;Name=WP_000758947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456262.1;locus_tag=STY7866_RS08545;product=lipoprotein;protein_id=WP_000758947.1;transl_table=11
NZ_CAAR01000209.1	RefSeq	gene	11114	11458	.	+	.	ID=gene-STY7866_RS08560;Name=STY7866_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08560
NZ_CAAR01000209.1	Protein Homology	CDS	11114	11458	.	+	0	ID=cds-WP_000977726.1;Parent=gene-STY7866_RS08560;Dbxref=Genbank:WP_000977726.1;Name=WP_000977726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=STY7866_RS08560;product=c-type lysozyme inhibitor;protein_id=WP_000977726.1;transl_table=11
NZ_CAAR01000209.1	RefSeq	gene	12212	12288	.	-	.	ID=gene-STY7866_RS08570;Name=STY7866_RS08570;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS08570
NZ_CAAR01000209.1	tRNAscan-SE	tRNA	12212	12288	.	-	.	ID=rna-STY7866_RS08570;Parent=gene-STY7866_RS08570;anticodon=(pos:complement(12252..12254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS08570;product=tRNA-Arg
NZ_CAAR01000209.1	tRNAscan-SE	exon	12212	12288	.	-	.	ID=exon-STY7866_RS08570-1;Parent=rna-STY7866_RS08570;anticodon=(pos:complement(12252..12254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS08570;product=tRNA-Arg
NZ_CAAR01000209.1	RefSeq	gene	12693	13250	.	-	.	ID=gene-STY7866_RS08580;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=STY7866_RS08580
NZ_CAAR01000209.1	Protein Homology	CDS	12693	13250	.	-	0	ID=cds-WP_000789474.1;Parent=gene-STY7866_RS08580;Dbxref=Genbank:WP_000789474.1;Name=WP_000789474.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456268.1;locus_tag=STY7866_RS08580;product=virulence membrane protein PagC;protein_id=WP_000789474.1;transl_table=11
NZ_CAAR01000209.1	RefSeq	pseudogene	13284	13480	.	+	.	ID=gene-STY7866_RS27090;Name=STY7866_RS27090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27090;pseudo=true
NZ_CAAR01000209.1	Protein Homology	CDS	13284	13480	.	+	0	ID=cds-STY7866_RS27090;Parent=gene-STY7866_RS27090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218891.1;locus_tag=STY7866_RS27090;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000209.1	RefSeq	pseudogene	14055	14319	.	+	.	ID=gene-STY7866_RS08595;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=pseudogene;locus_tag=STY7866_RS08595;pseudo=true
NZ_CAAR01000209.1	Protein Homology	CDS	14055	14319	.	+	0	ID=cds-STY7866_RS08595;Parent=gene-STY7866_RS08595;Note=frameshifted;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456271.1;locus_tag=STY7866_RS08595;product=virulence protein PagD;pseudo=true;transl_table=11
NZ_CAAR01000209.1	RefSeq	gene	14451	14663	.	+	.	ID=gene-STY7866_RS08600;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=STY7866_RS08600
NZ_CAAR01000209.1	Protein Homology	CDS	14451	14663	.	+	0	ID=cds-WP_001537306.1;Parent=gene-STY7866_RS08600;Dbxref=Genbank:WP_001537306.1;Name=WP_001537306.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456272.1;locus_tag=STY7866_RS08600;product=cold shock-like protein CspF;protein_id=WP_001537306.1;transl_table=11
NZ_CAAR01000209.1	RefSeq	gene	15081	15602	.	+	.	ID=gene-STY7866_RS08605;Name=STY7866_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08605
NZ_CAAR01000209.1	Protein Homology	CDS	15081	15602	.	+	0	ID=cds-WP_001537478.1;Parent=gene-STY7866_RS08605;Dbxref=Genbank:WP_001537478.1;Name=WP_001537478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456273.1;locus_tag=STY7866_RS08605;product=ricin-type beta-trefoil lectin domain protein;protein_id=WP_001537478.1;transl_table=11
NZ_CAAR01000209.1	RefSeq	gene	15793	16032	.	+	.	ID=gene-STY7866_RS08610;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=STY7866_RS08610
NZ_CAAR01000209.1	Protein Homology	CDS	15793	16032	.	+	0	ID=cds-WP_000497451.1;Parent=gene-STY7866_RS08610;Dbxref=Genbank:WP_000497451.1;Name=WP_000497451.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456274.1;locus_tag=STY7866_RS08610;product=virulence protein MsgA;protein_id=WP_000497451.1;transl_table=11
NZ_CAAR01000209.1	RefSeq	pseudogene	16905	17316	.	+	.	ID=gene-STY7866_RS08620;Name=cdtB;end_range=17316,.;gbkey=Gene;gene=cdtB;gene_biotype=pseudogene;locus_tag=STY7866_RS08620;partial=true;pseudo=true
NZ_CAAR01000209.1	Protein Homology	CDS	16905	17316	.	+	0	ID=cds-STY7866_RS08620;Parent=gene-STY7866_RS08620;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=17316,.;gbkey=CDS;gene=cdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456275.1;locus_tag=STY7866_RS08620;partial=true;product=cytolethal distending toxin S-CDT;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000208.1 1 684
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000208.1	RefSeq	region	1	684	.	+	.	ID=NZ_CAAR01000208.1:1..684;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000208.1	RefSeq	gene	93	684	.	-	.	ID=gene-STY7866_RS08475;Name=STY7866_RS08475;end_range=684,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08475;partial=true
NZ_CAAR01000208.1	Protein Homology	CDS	93	684	.	-	1	ID=cds-WP_000519171.1;Parent=gene-STY7866_RS08475;Dbxref=Genbank:WP_000519171.1;Name=WP_000519171.1;end_range=684,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=STY7866_RS08475;partial=true;product=dienelactone hydrolase family protein;protein_id=WP_000519171.1;transl_table=11
##sequence-region NZ_CAAR01000207.1 1 2667
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000207.1	RefSeq	region	1	2667	.	+	.	ID=NZ_CAAR01000207.1:1..2667;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000207.1	RefSeq	pseudogene	1	187	.	+	.	ID=gene-STY7866_RS08460;Name=STY7866_RS08460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS08460;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000207.1	Protein Homology	CDS	1	187	.	+	1	ID=cds-STY7866_RS08460;Parent=gene-STY7866_RS08460;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457555.1;locus_tag=STY7866_RS08460;partial=true;product=DedA family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000207.1	RefSeq	pseudogene	251	1149	.	-	.	ID=gene-STY7866_RS08465;Name=STY7866_RS08465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS08465;pseudo=true
NZ_CAAR01000207.1	Protein Homology	CDS	251	1149	.	-	0	ID=cds-STY7866_RS08465;Parent=gene-STY7866_RS08465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024513.1;locus_tag=STY7866_RS08465;product=AraC family transcriptional regulator;pseudo=true;transl_table=11
NZ_CAAR01000207.1	RefSeq	gene	1342	2505	.	+	.	ID=gene-STY7866_RS08470;Name=STY7866_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08470
NZ_CAAR01000207.1	Protein Homology	CDS	1342	2505	.	+	0	ID=cds-WP_000787713.1;Parent=gene-STY7866_RS08470;Dbxref=Genbank:WP_000787713.1;Name=WP_000787713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457557.1;locus_tag=STY7866_RS08470;product=alcohol dehydrogenase;protein_id=WP_000787713.1;transl_table=11
##sequence-region NZ_CAAR01000206.1 1 4364
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000206.1	RefSeq	region	1	4364	.	+	.	ID=NZ_CAAR01000206.1:1..4364;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000206.1	RefSeq	gene	1	2422	.	-	.	ID=gene-STY7866_RS08445;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=STY7866_RS08445;partial=true;start_range=.,1
NZ_CAAR01000206.1	Protein Homology	CDS	1	2422	.	-	0	ID=cds-WP_000850258.1;Parent=gene-STY7866_RS08445;Dbxref=Genbank:WP_000850258.1;Name=WP_000850258.1;gbkey=CDS;gene=dmsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455452.1;locus_tag=STY7866_RS08445;partial=true;product=dimethylsulfoxide reductase subunit A;protein_id=WP_000850258.1;start_range=.,1;transl_table=11
NZ_CAAR01000206.1	RefSeq	pseudogene	2660	3951	.	-	.	ID=gene-STY7866_RS08450;Name=serS;gbkey=Gene;gene=serS;gene_biotype=pseudogene;locus_tag=STY7866_RS08450;pseudo=true
NZ_CAAR01000206.1	Protein Homology	CDS	2660	3951	.	-	0	ID=cds-STY7866_RS08450;Parent=gene-STY7866_RS08450;Note=frameshifted;gbkey=CDS;gene=serS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=STY7866_RS08450;product=serine--tRNA ligase;pseudo=true;transl_table=11
NZ_CAAR01000206.1	RefSeq	pseudogene	4210	4364	.	-	.	ID=gene-STY7866_RS27085;Name=STY7866_RS27085;end_range=4364,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27085;partial=true;pseudo=true
NZ_CAAR01000206.1	Protein Homology	CDS	4210	4364	.	-	2	ID=cds-STY7866_RS27085;Parent=gene-STY7866_RS27085;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4364,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455450.1;locus_tag=STY7866_RS27085;partial=true;product=recombination factor protein RarA;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000205.1 1 21757
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000205.1	RefSeq	region	1	21757	.	+	.	ID=NZ_CAAR01000205.1:1..21757;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000205.1	RefSeq	gene	1	745	.	+	.	ID=gene-STY7866_RS08345;Name=STY7866_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08345;partial=true;start_range=.,1
NZ_CAAR01000205.1	Protein Homology	CDS	1	745	.	+	1	ID=cds-WP_000707750.1;Parent=gene-STY7866_RS08345;Dbxref=Genbank:WP_000707750.1;Name=WP_000707750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131802.1;locus_tag=STY7866_RS08345;partial=true;product=MsnO8 family LLM class oxidoreductase;protein_id=WP_000707750.1;start_range=.,1;transl_table=11
NZ_CAAR01000205.1	RefSeq	gene	836	2080	.	-	.	ID=gene-STY7866_RS08350;Name=STY7866_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08350
NZ_CAAR01000205.1	Protein Homology	CDS	836	2080	.	-	0	ID=cds-WP_000224390.1;Parent=gene-STY7866_RS08350;Dbxref=Genbank:WP_000224390.1;Name=WP_000224390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131807.1;locus_tag=STY7866_RS08350;product=tryptophan permease;protein_id=WP_000224390.1;transl_table=11
NZ_CAAR01000205.1	RefSeq	gene	2234	4123	.	-	.	ID=gene-STY7866_RS08355;Name=STY7866_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08355
NZ_CAAR01000205.1	Protein Homology	CDS	2234	4123	.	-	0	ID=cds-WP_000807240.1;Parent=gene-STY7866_RS08355;Dbxref=Genbank:WP_000807240.1;Name=WP_000807240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=STY7866_RS08355;product=DEAD/DEAH family ATP-dependent RNA helicase;protein_id=WP_000807240.1;transl_table=11
NZ_CAAR01000205.1	RefSeq	gene	4116	4196	.	-	.	ID=gene-STY7866_RS27080;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=STY7866_RS27080
NZ_CAAR01000205.1	Protein Homology	CDS	4116	4196	.	-	0	ID=cds-WP_010723222.1;Parent=gene-STY7866_RS27080;Dbxref=Genbank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=STY7866_RS27080;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11
NZ_CAAR01000205.1	RefSeq	gene	4302	5186	.	-	.	ID=gene-STY7866_RS08360;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=STY7866_RS08360
NZ_CAAR01000205.1	Protein Homology	CDS	4302	5186	.	-	0	ID=cds-WP_000802069.1;Parent=gene-STY7866_RS08360;Dbxref=Genbank:WP_000802069.1;Name=WP_000802069.1;gbkey=CDS;gene=nlpI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=STY7866_RS08360;product=lipoprotein NlpI;protein_id=WP_000802069.1;transl_table=11
NZ_CAAR01000205.1	RefSeq	gene	5296	7431	.	-	.	ID=gene-STY7866_RS08365;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=STY7866_RS08365
NZ_CAAR01000205.1	Protein Homology	CDS	5296	7431	.	-	0	ID=cds-WP_010989243.1;Parent=gene-STY7866_RS08365;Dbxref=Genbank:WP_010989243.1;Name=WP_010989243.1;gbkey=CDS;gene=pnp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457664.1;locus_tag=STY7866_RS08365;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_010989243.1;transl_table=11
NZ_CAAR01000205.1	RefSeq	gene	7673	7942	.	-	.	ID=gene-STY7866_RS08370;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=STY7866_RS08370
NZ_CAAR01000205.1	Protein Homology	CDS	7673	7942	.	-	0	ID=cds-WP_000059465.1;Parent=gene-STY7866_RS08370;Dbxref=Genbank:WP_000059465.1;Name=WP_000059465.1;gbkey=CDS;gene=rpsO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=STY7866_RS08370;product=30S ribosomal protein S15;protein_id=WP_000059465.1;transl_table=11
NZ_CAAR01000205.1	RefSeq	gene	8093	9037	.	-	.	ID=gene-STY7866_RS08375;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=STY7866_RS08375
NZ_CAAR01000205.1	Protein Homology	CDS	8093	9037	.	-	0	ID=cds-WP_000089681.1;Parent=gene-STY7866_RS08375;Dbxref=Genbank:WP_000089681.1;Name=WP_000089681.1;gbkey=CDS;gene=truB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457666.1;locus_tag=STY7866_RS08375;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_000089681.1;transl_table=11
NZ_CAAR01000205.1	RefSeq	gene	9037	9438	.	-	.	ID=gene-STY7866_RS08380;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=STY7866_RS08380
NZ_CAAR01000205.1	Protein Homology	CDS	9037	9438	.	-	0	ID=cds-WP_001040208.1;Parent=gene-STY7866_RS08380;Dbxref=Genbank:WP_001040208.1;Name=WP_001040208.1;gbkey=CDS;gene=rbfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457667.1;locus_tag=STY7866_RS08380;product=30S ribosome-binding factor RbfA;protein_id=WP_001040208.1;transl_table=11
NZ_CAAR01000205.1	RefSeq	gene	9659	12337	.	-	.	ID=gene-STY7866_RS08385;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=STY7866_RS08385
NZ_CAAR01000205.1	Protein Homology	CDS	9659	12337	.	-	0	ID=cds-WP_000131175.1;Parent=gene-STY7866_RS08385;Dbxref=Genbank:WP_000131175.1;Name=WP_000131175.1;gbkey=CDS;gene=infB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457668.1;locus_tag=STY7866_RS08385;product=translation initiation factor IF-2;protein_id=WP_000131175.1;transl_table=11
NZ_CAAR01000205.1	RefSeq	gene	12362	13849	.	-	.	ID=gene-STY7866_RS08390;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=STY7866_RS08390
NZ_CAAR01000205.1	Protein Homology	CDS	12362	13849	.	-	0	ID=cds-WP_000301802.1;Parent=gene-STY7866_RS08390;Dbxref=Genbank:WP_000301802.1;Name=WP_000301802.1;gbkey=CDS;gene=nusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001677576.1;locus_tag=STY7866_RS08390;product=transcription termination/antitermination protein NusA;protein_id=WP_000301802.1;transl_table=11
NZ_CAAR01000205.1	RefSeq	gene	13891	14343	.	-	.	ID=gene-STY7866_RS08395;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=STY7866_RS08395
NZ_CAAR01000205.1	Protein Homology	CDS	13891	14343	.	-	0	ID=cds-WP_000105461.1;Parent=gene-STY7866_RS08395;Dbxref=Genbank:WP_000105461.1;Name=WP_000105461.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=STY7866_RS08395;product=ribosome maturation factor RimP;protein_id=WP_000105461.1;transl_table=11
NZ_CAAR01000205.1	RefSeq	gene	14552	14628	.	-	.	ID=gene-STY7866_RS08405;Name=STY7866_RS08405;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS08405
NZ_CAAR01000205.1	tRNAscan-SE	tRNA	14552	14628	.	-	.	ID=rna-STY7866_RS08405;Parent=gene-STY7866_RS08405;anticodon=(pos:complement(14592..14594));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS08405;product=tRNA-Met
NZ_CAAR01000205.1	tRNAscan-SE	exon	14552	14628	.	-	.	ID=exon-STY7866_RS08405-1;Parent=rna-STY7866_RS08405;anticodon=(pos:complement(14592..14594));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS08405;product=tRNA-Met
NZ_CAAR01000205.1	RefSeq	gene	14906	16315	.	+	.	ID=gene-STY7866_RS08410;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=STY7866_RS08410
NZ_CAAR01000205.1	Protein Homology	CDS	14906	16315	.	+	0	ID=cds-WP_011233187.1;Parent=gene-STY7866_RS08410;Dbxref=Genbank:WP_011233187.1;Name=WP_011233187.1;gbkey=CDS;gene=argG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457671.3;locus_tag=STY7866_RS08410;product=argininosuccinate synthase;protein_id=WP_011233187.1;transl_table=11
NZ_CAAR01000205.1	RefSeq	gene	16513	16599	.	-	.	ID=gene-STY7866_RS08415;Name=STY7866_RS08415;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS08415
NZ_CAAR01000205.1	tRNAscan-SE	tRNA	16513	16599	.	-	.	ID=rna-STY7866_RS08415;Parent=gene-STY7866_RS08415;anticodon=(pos:complement(16563..16565));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS08415;product=tRNA-Leu
NZ_CAAR01000205.1	tRNAscan-SE	exon	16513	16599	.	-	.	ID=exon-STY7866_RS08415-1;Parent=rna-STY7866_RS08415;anticodon=(pos:complement(16563..16565));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS08415;product=tRNA-Leu
NZ_CAAR01000205.1	RefSeq	gene	16613	16945	.	-	.	ID=gene-STY7866_RS08420;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=STY7866_RS08420
NZ_CAAR01000205.1	Protein Homology	CDS	16613	16945	.	-	0	ID=cds-WP_000272680.1;Parent=gene-STY7866_RS08420;Dbxref=Genbank:WP_000272680.1;Name=WP_000272680.1;gbkey=CDS;gene=secG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457672.1;locus_tag=STY7866_RS08420;product=preprotein translocase subunit SecG;protein_id=WP_000272680.1;transl_table=11
NZ_CAAR01000205.1	RefSeq	gene	17168	18505	.	-	.	ID=gene-STY7866_RS08425;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=STY7866_RS08425
NZ_CAAR01000205.1	Protein Homology	CDS	17168	18505	.	-	0	ID=cds-WP_000071169.1;Parent=gene-STY7866_RS08425;Dbxref=Genbank:WP_000071169.1;Name=WP_000071169.1;gbkey=CDS;gene=glmM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003905541.1;locus_tag=STY7866_RS08425;product=phosphoglucosamine mutase;protein_id=WP_000071169.1;transl_table=11
NZ_CAAR01000205.1	RefSeq	gene	18498	19346	.	-	.	ID=gene-STY7866_RS08430;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=STY7866_RS08430
NZ_CAAR01000205.1	Protein Homology	CDS	18498	19346	.	-	0	ID=cds-WP_000764715.1;Parent=gene-STY7866_RS08430;Dbxref=Genbank:WP_000764715.1;Name=WP_000764715.1;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457674.1;locus_tag=STY7866_RS08430;product=dihydropteroate synthase;protein_id=WP_000764715.1;transl_table=11
NZ_CAAR01000205.1	RefSeq	gene	19451	21385	.	-	.	ID=gene-STY7866_RS08435;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=STY7866_RS08435
NZ_CAAR01000205.1	Protein Homology	CDS	19451	21385	.	-	0	ID=cds-WP_001107481.1;Parent=gene-STY7866_RS08435;Dbxref=Genbank:WP_001107481.1;Name=WP_001107481.1;gbkey=CDS;gene=ftsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=STY7866_RS08435;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107481.1;transl_table=11
NZ_CAAR01000205.1	RefSeq	pseudogene	21489	21757	.	-	.	ID=gene-STY7866_RS08440;Name=STY7866_RS08440;end_range=21757,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS08440;partial=true;pseudo=true
NZ_CAAR01000205.1	Protein Homology	CDS	21489	21757	.	-	2	ID=cds-STY7866_RS08440;Parent=gene-STY7866_RS08440;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=21757,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457676.1;locus_tag=STY7866_RS08440;partial=true;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000204.1 1 14965
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000204.1	RefSeq	region	1	14965	.	+	.	ID=NZ_CAAR01000204.1:1..14965;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000204.1	RefSeq	pseudogene	1	1552	.	+	.	ID=gene-STY7866_RS08270;Name=recB;gbkey=Gene;gene=recB;gene_biotype=pseudogene;locus_tag=STY7866_RS08270;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000204.1	Protein Homology	CDS	1	1552	.	+	1	ID=cds-STY7866_RS08270;Parent=gene-STY7866_RS08270;Note=helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=recB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457387.1;locus_tag=STY7866_RS08270;partial=true;product=exodeoxyribonuclease V subunit beta;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000204.1	RefSeq	gene	1549	3384	.	+	.	ID=gene-STY7866_RS08275;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=STY7866_RS08275
NZ_CAAR01000204.1	Protein Homology	CDS	1549	3384	.	+	0	ID=cds-WP_000155175.1;Parent=gene-STY7866_RS08275;Dbxref=Genbank:WP_000155175.1;Name=WP_000155175.1;gbkey=CDS;gene=recD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457386.1;locus_tag=STY7866_RS08275;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_000155175.1;transl_table=11
NZ_CAAR01000204.1	RefSeq	gene	3487	4818	.	-	.	ID=gene-STY7866_RS08280;Name=STY7866_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08280
NZ_CAAR01000204.1	Protein Homology	CDS	3487	4818	.	-	0	ID=cds-WP_000588970.1;Parent=gene-STY7866_RS08280;Dbxref=Genbank:WP_000588970.1;Name=WP_000588970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457385.1;locus_tag=STY7866_RS08280;product=amino-acid N-acetyltransferase;protein_id=WP_000588970.1;transl_table=11
NZ_CAAR01000204.1	RefSeq	gene	5051	6304	.	+	.	ID=gene-STY7866_RS08285;Name=STY7866_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08285
NZ_CAAR01000204.1	Protein Homology	CDS	5051	6304	.	+	0	ID=cds-WP_000011916.1;Parent=gene-STY7866_RS08285;Dbxref=Genbank:WP_000011916.1;Name=WP_000011916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457384.1;locus_tag=STY7866_RS08285;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_000011916.1;transl_table=11
NZ_CAAR01000204.1	RefSeq	gene	6414	6490	.	-	.	ID=gene-STY7866_RS08290;Name=STY7866_RS08290;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS08290
NZ_CAAR01000204.1	tRNAscan-SE	tRNA	6414	6490	.	-	.	ID=rna-STY7866_RS08290;Parent=gene-STY7866_RS08290;anticodon=(pos:complement(6454..6456));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS08290;product=tRNA-Met
NZ_CAAR01000204.1	tRNAscan-SE	exon	6414	6490	.	-	.	ID=exon-STY7866_RS08290-1;Parent=rna-STY7866_RS08290;anticodon=(pos:complement(6454..6456));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS08290;product=tRNA-Met
NZ_CAAR01000204.1	RefSeq	gene	6520	6596	.	-	.	ID=gene-STY7866_RS08295;Name=STY7866_RS08295;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS08295
NZ_CAAR01000204.1	tRNAscan-SE	tRNA	6520	6596	.	-	.	ID=rna-STY7866_RS08295;Parent=gene-STY7866_RS08295;anticodon=(pos:complement(6560..6562));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS08295;product=tRNA-Met
NZ_CAAR01000204.1	tRNAscan-SE	exon	6520	6596	.	-	.	ID=exon-STY7866_RS08295-1;Parent=rna-STY7866_RS08295;anticodon=(pos:complement(6560..6562));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS08295;product=tRNA-Met
NZ_CAAR01000204.1	RefSeq	gene	6805	7902	.	+	.	ID=gene-STY7866_RS08300;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=STY7866_RS08300
NZ_CAAR01000204.1	Protein Homology	CDS	6805	7902	.	+	0	ID=cds-WP_000678621.1;Parent=gene-STY7866_RS08300;Dbxref=Genbank:WP_000678621.1;Name=WP_000678621.1;gbkey=CDS;gene=mltA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=STY7866_RS08300;product=murein transglycosylase A;protein_id=WP_000678621.1;transl_table=11
NZ_CAAR01000204.1	RefSeq	gene	8011	8817	.	+	.	ID=gene-STY7866_RS08305;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=STY7866_RS08305
NZ_CAAR01000204.1	Protein Homology	CDS	8011	8817	.	+	0	ID=cds-WP_000117742.1;Parent=gene-STY7866_RS08305;Dbxref=Genbank:WP_000117742.1;Name=WP_000117742.1;gbkey=CDS;gene=tcdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457382.1;locus_tag=STY7866_RS08305;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117742.1;transl_table=11
NZ_CAAR01000204.1	RefSeq	pseudogene	8869	9755	.	-	.	ID=gene-STY7866_RS08310;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=pseudogene;locus_tag=STY7866_RS08310;pseudo=true
NZ_CAAR01000204.1	Protein Homology	CDS	8869	9755	.	-	0	ID=cds-STY7866_RS08310;Parent=gene-STY7866_RS08310;Note=frameshifted;gbkey=CDS;gene=rarD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=STY7866_RS08310;product=EamA family transporter RarD;pseudo=true;transl_table=11
NZ_CAAR01000204.1	RefSeq	gene	10055	10498	.	-	.	ID=gene-STY7866_RS08315;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=STY7866_RS08315
NZ_CAAR01000204.1	Protein Homology	CDS	10055	10498	.	-	0	ID=cds-WP_000184198.1;Parent=gene-STY7866_RS08315;Dbxref=Genbank:WP_000184198.1;Name=WP_000184198.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457380.1;locus_tag=STY7866_RS08315;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184198.1;transl_table=11
NZ_CAAR01000204.1	RefSeq	gene	10498	11703	.	-	.	ID=gene-STY7866_RS08320;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=STY7866_RS08320
NZ_CAAR01000204.1	Protein Homology	CDS	10498	11703	.	-	0	ID=cds-WP_000991058.1;Parent=gene-STY7866_RS08320;Dbxref=Genbank:WP_000991058.1;Name=WP_000991058.1;gbkey=CDS;gene=csdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457379.1;locus_tag=STY7866_RS08320;product=cysteine desulfurase CsdA;protein_id=WP_000991058.1;transl_table=11
NZ_CAAR01000204.1	RefSeq	gene	11896	12123	.	+	.	ID=gene-STY7866_RS08325;Name=STY7866_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08325
NZ_CAAR01000204.1	Protein Homology	CDS	11896	12123	.	+	0	ID=cds-WP_000750393.1;Parent=gene-STY7866_RS08325;Dbxref=Genbank:WP_000750393.1;Name=WP_000750393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457378.1;locus_tag=STY7866_RS08325;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750393.1;transl_table=11
NZ_CAAR01000204.1	RefSeq	pseudogene	12470	13388	.	+	.	ID=gene-STY7866_RS08330;Name=STY7866_RS08330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS08330;pseudo=true
NZ_CAAR01000204.1	Protein Homology	CDS	12470	13388	.	+	0	ID=cds-STY7866_RS08330;Parent=gene-STY7866_RS08330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=STY7866_RS08330;product=transcriptional regulator GcvA;pseudo=true;transl_table=11
NZ_CAAR01000204.1	RefSeq	gene	13407	13802	.	+	.	ID=gene-STY7866_RS08335;Name=STY7866_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08335
NZ_CAAR01000204.1	Protein Homology	CDS	13407	13802	.	+	0	ID=cds-WP_000203913.1;Parent=gene-STY7866_RS08335;Dbxref=Genbank:WP_000203913.1;Name=WP_000203913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457376.1;locus_tag=STY7866_RS08335;product=DUF423 domain-containing protein;protein_id=WP_000203913.1;transl_table=11
NZ_CAAR01000204.1	RefSeq	gene	13795	14895	.	+	.	ID=gene-STY7866_RS08340;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=STY7866_RS08340
NZ_CAAR01000204.1	Protein Homology	CDS	13795	14895	.	+	0	ID=cds-WP_001045494.1;Parent=gene-STY7866_RS08340;Dbxref=Genbank:WP_001045494.1;Name=WP_001045494.1;gbkey=CDS;gene=rlmM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457375.1;locus_tag=STY7866_RS08340;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045494.1;transl_table=11
##sequence-region NZ_CAAR01000203.1 1 4612
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000203.1	RefSeq	region	1	4612	.	+	.	ID=NZ_CAAR01000203.1:1..4612;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000203.1	RefSeq	gene	287	1711	.	+	.	ID=gene-STY7866_RS08250;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=STY7866_RS08250
NZ_CAAR01000203.1	Protein Homology	CDS	287	1711	.	+	0	ID=cds-WP_001527420.1;Parent=gene-STY7866_RS08250;Dbxref=Genbank:WP_001527420.1;Name=WP_001527420.1;gbkey=CDS;gene=lpdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=STY7866_RS08250;product=dihydrolipoyl dehydrogenase;protein_id=WP_001527420.1;transl_table=11
NZ_CAAR01000203.1	RefSeq	gene	2000	2284	.	+	.	ID=gene-STY7866_RS08255;Name=STY7866_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08255
NZ_CAAR01000203.1	Protein Homology	CDS	2000	2284	.	+	0	ID=cds-WP_000765363.1;Parent=gene-STY7866_RS08255;Dbxref=Genbank:WP_000765363.1;Name=WP_000765363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454769.1;locus_tag=STY7866_RS08255;product=outer membrane protein;protein_id=WP_000765363.1;transl_table=11
NZ_CAAR01000203.1	RefSeq	gene	2322	3113	.	-	.	ID=gene-STY7866_RS08260;Name=STY7866_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08260
NZ_CAAR01000203.1	Protein Homology	CDS	2322	3113	.	-	0	ID=cds-WP_000757452.1;Parent=gene-STY7866_RS08260;Dbxref=Genbank:WP_000757452.1;Name=WP_000757452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454770.1;locus_tag=STY7866_RS08260;product=DUF2950 family protein;protein_id=WP_000757452.1;transl_table=11
NZ_CAAR01000203.1	RefSeq	gene	3126	4612	.	-	.	ID=gene-STY7866_RS08265;Name=STY7866_RS08265;end_range=4612,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08265;partial=true
NZ_CAAR01000203.1	Protein Homology	CDS	3126	4612	.	-	2	ID=cds-WP_000303846.1;Parent=gene-STY7866_RS08265;Dbxref=Genbank:WP_000303846.1;Name=WP_000303846.1;end_range=4612,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454771.1;locus_tag=STY7866_RS08265;partial=true;product=DUF3300 domain-containing protein;protein_id=WP_000303846.1;transl_table=11
##sequence-region NZ_CAAR01000202.1 1 1817
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000202.1	RefSeq	region	1	1817	.	+	.	ID=NZ_CAAR01000202.1:1..1817;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000202.1	RefSeq	gene	69	380	.	+	.	ID=gene-STY7866_RS08225;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=STY7866_RS08225
NZ_CAAR01000202.1	Protein Homology	CDS	69	380	.	+	0	ID=cds-WP_001181005.1;Parent=gene-STY7866_RS08225;Dbxref=Genbank:WP_001181005.1;Name=WP_001181005.1;gbkey=CDS;gene=rpsJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=STY7866_RS08225;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11
NZ_CAAR01000202.1	RefSeq	gene	413	1042	.	+	.	ID=gene-STY7866_RS08230;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=STY7866_RS08230
NZ_CAAR01000202.1	Protein Homology	CDS	413	1042	.	+	0	ID=cds-WP_000579838.1;Parent=gene-STY7866_RS08230;Dbxref=Genbank:WP_000579838.1;Name=WP_000579838.1;gbkey=CDS;gene=rplC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=STY7866_RS08230;product=50S ribosomal protein L3;protein_id=WP_000579838.1;transl_table=11
NZ_CAAR01000202.1	RefSeq	gene	1053	1658	.	+	.	ID=gene-STY7866_RS08235;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=STY7866_RS08235
NZ_CAAR01000202.1	Protein Homology	CDS	1053	1658	.	+	0	ID=cds-WP_000424395.1;Parent=gene-STY7866_RS08235;Dbxref=Genbank:WP_000424395.1;Name=WP_000424395.1;gbkey=CDS;gene=rplD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=STY7866_RS08235;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11
NZ_CAAR01000202.1	RefSeq	gene	1655	1817	.	+	.	ID=gene-STY7866_RS27075;Name=rplW;end_range=1817,.;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=STY7866_RS27075;partial=true
NZ_CAAR01000202.1	Protein Homology	CDS	1655	1817	.	+	0	ID=cds-WP_000617545.1;Parent=gene-STY7866_RS27075;Dbxref=Genbank:WP_000617545.1;Name=WP_000617545.1;end_range=1817,.;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=STY7866_RS27075;partial=true;product=50S ribosomal protein L23;protein_id=WP_000617545.1;transl_table=11
##sequence-region NZ_CAAR01000201.1 1 3956
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000201.1	RefSeq	region	1	3956	.	+	.	ID=NZ_CAAR01000201.1:1..3956;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000201.1	RefSeq	gene	1	844	.	+	.	ID=gene-STY7866_RS08205;Name=STY7866_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08205;partial=true;start_range=.,1
NZ_CAAR01000201.1	Protein Homology	CDS	1	844	.	+	1	ID=cds-WP_000325621.1;Parent=gene-STY7866_RS08205;Dbxref=Genbank:WP_000325621.1;Name=WP_000325621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457102.1;locus_tag=STY7866_RS08205;partial=true;product=oxidoreductase;protein_id=WP_000325621.1;start_range=.,1;transl_table=11
NZ_CAAR01000201.1	RefSeq	gene	883	1731	.	-	.	ID=gene-STY7866_RS08210;Name=STY7866_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08210
NZ_CAAR01000201.1	Protein Homology	CDS	883	1731	.	-	0	ID=cds-WP_000995694.1;Parent=gene-STY7866_RS08210;Dbxref=Genbank:WP_000995694.1;Name=WP_000995694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457101.1;locus_tag=STY7866_RS08210;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000995694.1;transl_table=11
NZ_CAAR01000201.1	RefSeq	gene	1847	2740	.	+	.	ID=gene-STY7866_RS08215;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=STY7866_RS08215
NZ_CAAR01000201.1	Protein Homology	CDS	1847	2740	.	+	0	ID=cds-WP_001048539.1;Parent=gene-STY7866_RS08215;Dbxref=Genbank:WP_001048539.1;Name=WP_001048539.1;gbkey=CDS;gene=murQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457100.1;locus_tag=STY7866_RS08215;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001048539.1;transl_table=11
NZ_CAAR01000201.1	RefSeq	gene	2751	3956	.	+	.	ID=gene-STY7866_RS08220;Name=STY7866_RS08220;end_range=3956,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08220;partial=true
NZ_CAAR01000201.1	Protein Homology	CDS	2751	3956	.	+	0	ID=cds-WP_000361657.1;Parent=gene-STY7866_RS08220;Dbxref=Genbank:WP_000361657.1;Name=WP_000361657.1;end_range=3956,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457099.1;locus_tag=STY7866_RS08220;partial=true;product=PTS transporter subunit EIIC;protein_id=WP_000361657.1;transl_table=11
##sequence-region NZ_CAAR01000200.1 1 31134
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000200.1	RefSeq	region	1	31134	.	+	.	ID=NZ_CAAR01000200.1:1..31134;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000200.1	RefSeq	gene	19	396	.	+	.	ID=gene-STY7866_RS08050;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=STY7866_RS08050
NZ_CAAR01000200.1	Protein Homology	CDS	19	396	.	+	0	ID=cds-WP_000538693.1;Parent=gene-STY7866_RS08050;Dbxref=Genbank:WP_000538693.1;Name=WP_000538693.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456846.1;locus_tag=STY7866_RS08050;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000538693.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	391	648	.	-	.	ID=gene-STY7866_RS08055;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=STY7866_RS08055
NZ_CAAR01000200.1	Protein Homology	CDS	391	648	.	-	0	ID=cds-WP_000455131.1;Parent=gene-STY7866_RS08055;Dbxref=Genbank:WP_000455131.1;Name=WP_000455131.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456847.1;locus_tag=STY7866_RS08055;product=signal transduction protein PmrD;protein_id=WP_000455131.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	746	2113	.	-	.	ID=gene-STY7866_RS08060;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=STY7866_RS08060
NZ_CAAR01000200.1	Protein Homology	CDS	746	2113	.	-	0	ID=cds-WP_000144672.1;Parent=gene-STY7866_RS08060;Dbxref=Genbank:WP_000144672.1;Name=WP_000144672.1;gbkey=CDS;gene=menE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456848.1;locus_tag=STY7866_RS08060;product=o-succinylbenzoate--CoA ligase;protein_id=WP_000144672.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	2110	3072	.	-	.	ID=gene-STY7866_RS08065;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=STY7866_RS08065
NZ_CAAR01000200.1	Protein Homology	CDS	2110	3072	.	-	0	ID=cds-WP_001255562.1;Parent=gene-STY7866_RS08065;Dbxref=Genbank:WP_001255562.1;Name=WP_001255562.1;gbkey=CDS;gene=menC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456849.1;locus_tag=STY7866_RS08065;product=o-succinylbenzoate synthase;protein_id=WP_001255562.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	3072	3929	.	-	.	ID=gene-STY7866_RS08070;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=STY7866_RS08070
NZ_CAAR01000200.1	Protein Homology	CDS	3072	3929	.	-	0	ID=cds-WP_000640013.1;Parent=gene-STY7866_RS08070;Dbxref=Genbank:WP_000640013.1;Name=WP_000640013.1;gbkey=CDS;gene=menB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=STY7866_RS08070;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000640013.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	3944	4702	.	-	.	ID=gene-STY7866_RS08075;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=STY7866_RS08075
NZ_CAAR01000200.1	Protein Homology	CDS	3944	4702	.	-	0	ID=cds-WP_000979151.1;Parent=gene-STY7866_RS08075;Dbxref=Genbank:WP_000979151.1;Name=WP_000979151.1;gbkey=CDS;gene=menH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=STY7866_RS08075;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000979151.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	4699	6369	.	-	.	ID=gene-STY7866_RS08080;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=STY7866_RS08080
NZ_CAAR01000200.1	Protein Homology	CDS	4699	6369	.	-	0	ID=cds-WP_000116387.1;Parent=gene-STY7866_RS08080;Dbxref=Genbank:WP_000116387.1;Name=WP_000116387.1;gbkey=CDS;gene=menD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456852.1;locus_tag=STY7866_RS08080;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_000116387.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	6455	7750	.	-	.	ID=gene-STY7866_RS08085;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=STY7866_RS08085
NZ_CAAR01000200.1	Protein Homology	CDS	6455	7750	.	-	0	ID=cds-WP_000555672.1;Parent=gene-STY7866_RS08085;Dbxref=Genbank:WP_000555672.1;Name=WP_000555672.1;gbkey=CDS;gene=menF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456853.1;locus_tag=STY7866_RS08085;product=isochorismate synthase MenF;protein_id=WP_000555672.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	7851	8162	.	-	.	ID=gene-STY7866_RS08090;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=STY7866_RS08090
NZ_CAAR01000200.1	Protein Homology	CDS	7851	8162	.	-	0	ID=cds-WP_001242981.1;Parent=gene-STY7866_RS08090;Dbxref=Genbank:WP_001242981.1;Name=WP_001242981.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456854.1;locus_tag=STY7866_RS08090;product=stress response protein ElaB;protein_id=WP_001242981.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	8211	8672	.	-	.	ID=gene-STY7866_RS08095;Name=STY7866_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08095
NZ_CAAR01000200.1	Protein Homology	CDS	8211	8672	.	-	0	ID=cds-WP_000568155.1;Parent=gene-STY7866_RS08095;Dbxref=Genbank:WP_000568155.1;Name=WP_000568155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456855.1;locus_tag=STY7866_RS08095;product=GNAT family N-acetyltransferase;protein_id=WP_000568155.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	8738	9649	.	+	.	ID=gene-STY7866_RS08100;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=STY7866_RS08100
NZ_CAAR01000200.1	Protein Homology	CDS	8738	9649	.	+	0	ID=cds-WP_024132429.1;Parent=gene-STY7866_RS08100;Dbxref=Genbank:WP_024132429.1;Name=WP_024132429.1;gbkey=CDS;gene=rbn;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456856.1;locus_tag=STY7866_RS08100;product=ribonuclease BN;protein_id=WP_024132429.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	9715	10719	.	+	.	ID=gene-STY7866_RS08105;Name=STY7866_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08105
NZ_CAAR01000200.1	Protein Homology	CDS	9715	10719	.	+	0	ID=cds-WP_000368546.1;Parent=gene-STY7866_RS08105;Dbxref=Genbank:WP_000368546.1;Name=WP_000368546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456857.1;locus_tag=STY7866_RS08105;product=chemotaxis protein CheV;protein_id=WP_000368546.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	10860	12317	.	-	.	ID=gene-STY7866_RS08110;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=STY7866_RS08110
NZ_CAAR01000200.1	Protein Homology	CDS	10860	12317	.	-	0	ID=cds-WP_000156669.1;Parent=gene-STY7866_RS08110;Dbxref=Genbank:WP_000156669.1;Name=WP_000156669.1;gbkey=CDS;gene=nuoN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=STY7866_RS08110;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156669.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	12324	13853	.	-	.	ID=gene-STY7866_RS08115;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=STY7866_RS08115
NZ_CAAR01000200.1	Protein Homology	CDS	12324	13853	.	-	0	ID=cds-WP_000926422.1;Parent=gene-STY7866_RS08115;Dbxref=Genbank:WP_000926422.1;Name=WP_000926422.1;gbkey=CDS;gene=nuoM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=STY7866_RS08115;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926422.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	14167	16008	.	-	.	ID=gene-STY7866_RS08120;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=STY7866_RS08120
NZ_CAAR01000200.1	Protein Homology	CDS	14167	16008	.	-	0	ID=cds-WP_001056574.1;Parent=gene-STY7866_RS08120;Dbxref=Genbank:WP_001056574.1;Name=WP_001056574.1;gbkey=CDS;gene=nuoL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=STY7866_RS08120;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056574.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	16005	16307	.	-	.	ID=gene-STY7866_RS08125;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=STY7866_RS08125
NZ_CAAR01000200.1	Protein Homology	CDS	16005	16307	.	-	0	ID=cds-WP_000612687.1;Parent=gene-STY7866_RS08125;Dbxref=Genbank:WP_000612687.1;Name=WP_000612687.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833671.1;locus_tag=STY7866_RS08125;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612687.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	16304	16858	.	-	.	ID=gene-STY7866_RS08130;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=STY7866_RS08130
NZ_CAAR01000200.1	Protein Homology	CDS	16304	16858	.	-	0	ID=cds-WP_000393522.1;Parent=gene-STY7866_RS08130;Dbxref=Genbank:WP_000393522.1;Name=WP_000393522.1;gbkey=CDS;gene=nuoJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774950.1;locus_tag=STY7866_RS08130;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393522.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	16869	17411	.	-	.	ID=gene-STY7866_RS08135;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=STY7866_RS08135
NZ_CAAR01000200.1	Protein Homology	CDS	16869	17411	.	-	0	ID=cds-WP_000172747.1;Parent=gene-STY7866_RS08135;Dbxref=Genbank:WP_000172747.1;Name=WP_000172747.1;gbkey=CDS;gene=nuoI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=STY7866_RS08135;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172747.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	17426	18403	.	-	.	ID=gene-STY7866_RS08140;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=STY7866_RS08140
NZ_CAAR01000200.1	Protein Homology	CDS	17426	18403	.	-	0	ID=cds-WP_000118517.1;Parent=gene-STY7866_RS08140;Dbxref=Genbank:WP_000118517.1;Name=WP_000118517.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=STY7866_RS08140;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118517.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	18400	21126	.	-	.	ID=gene-STY7866_RS08145;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=STY7866_RS08145
NZ_CAAR01000200.1	Protein Homology	CDS	18400	21126	.	-	0	ID=cds-WP_001518099.1;Parent=gene-STY7866_RS08145;Dbxref=Genbank:WP_001518099.1;Name=WP_001518099.1;gbkey=CDS;gene=nuoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=STY7866_RS08145;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_001518099.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	21157	22494	.	-	.	ID=gene-STY7866_RS08150;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=STY7866_RS08150
NZ_CAAR01000200.1	Protein Homology	CDS	21157	22494	.	-	0	ID=cds-WP_000800046.1;Parent=gene-STY7866_RS08150;Dbxref=Genbank:WP_000800046.1;Name=WP_000800046.1;gbkey=CDS;gene=nuoF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456866.1;locus_tag=STY7866_RS08150;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000800046.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	22491	22991	.	-	.	ID=gene-STY7866_RS08155;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=STY7866_RS08155
NZ_CAAR01000200.1	Protein Homology	CDS	22491	22991	.	-	0	ID=cds-WP_000545038.1;Parent=gene-STY7866_RS08155;Dbxref=Genbank:WP_000545038.1;Name=WP_000545038.1;gbkey=CDS;gene=nuoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124159.1;locus_tag=STY7866_RS08155;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545038.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	pseudogene	22994	24795	.	-	.	ID=gene-STY7866_RS08160;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=pseudogene;locus_tag=STY7866_RS08160;pseudo=true
NZ_CAAR01000200.1	Protein Homology	CDS	22994	24795	.	-	0	ID=cds-STY7866_RS08160;Parent=gene-STY7866_RS08160;Note=frameshifted;gbkey=CDS;gene=nuoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456868.1;locus_tag=STY7866_RS08160;product=NADH-quinone oxidoreductase subunit C/D;pseudo=true;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	24882	25544	.	-	.	ID=gene-STY7866_RS08165;Name=STY7866_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08165
NZ_CAAR01000200.1	Protein Homology	CDS	24882	25544	.	-	0	ID=cds-WP_000386728.1;Parent=gene-STY7866_RS08165;Dbxref=Genbank:WP_000386728.1;Name=WP_000386728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017490251.1;locus_tag=STY7866_RS08165;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_000386728.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	25560	26003	.	-	.	ID=gene-STY7866_RS08170;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=STY7866_RS08170
NZ_CAAR01000200.1	Protein Homology	CDS	25560	26003	.	-	0	ID=cds-WP_000062993.1;Parent=gene-STY7866_RS08170;Dbxref=Genbank:WP_000062993.1;Name=WP_000062993.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456870.1;locus_tag=STY7866_RS08170;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062993.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	26395	26547	.	-	.	ID=gene-STY7866_RS08175;Name=STY7866_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08175
NZ_CAAR01000200.1	Protein Homology	CDS	26395	26547	.	-	0	ID=cds-WP_001522276.1;Parent=gene-STY7866_RS08175;Dbxref=Genbank:WP_001522276.1;Name=WP_001522276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=STY7866_RS08175;product=hypothetical protein;protein_id=WP_001522276.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	26627	27565	.	-	.	ID=gene-STY7866_RS08180;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=STY7866_RS08180
NZ_CAAR01000200.1	Protein Homology	CDS	26627	27565	.	-	0	ID=cds-WP_000606282.1;Parent=gene-STY7866_RS08180;Dbxref=Genbank:WP_000606282.1;Name=WP_000606282.1;gbkey=CDS;gene=lrhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456872.1;locus_tag=STY7866_RS08180;product=transcriptional regulator LrhA;protein_id=WP_000606282.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	28497	29711	.	+	.	ID=gene-STY7866_RS08190;Name=STY7866_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08190
NZ_CAAR01000200.1	Protein Homology	CDS	28497	29711	.	+	0	ID=cds-WP_000074540.1;Parent=gene-STY7866_RS08190;Dbxref=Genbank:WP_000074540.1;Name=WP_000074540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456873.1;locus_tag=STY7866_RS08190;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_000074540.1;transl_table=11
NZ_CAAR01000200.1	RefSeq	pseudogene	29805	30403	.	+	.	ID=gene-STY7866_RS08195;Name=STY7866_RS08195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS08195;pseudo=true
NZ_CAAR01000200.1	Protein Homology	CDS	29805	30403	.	+	0	ID=cds-STY7866_RS08195;Parent=gene-STY7866_RS08195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456874.1;locus_tag=STY7866_RS08195;product=5'-deoxynucleotidase;pseudo=true;transl_table=11
NZ_CAAR01000200.1	RefSeq	pseudogene	30392	30454	.	-	.	ID=gene-STY7866_RS27070;Name=STY7866_RS27070;end_range=30454,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27070;partial=true;pseudo=true
NZ_CAAR01000200.1	Protein Homology	CDS	30392	30454	.	-	0	ID=cds-STY7866_RS27070;Parent=gene-STY7866_RS27070;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=30454,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00756.1;locus_tag=STY7866_RS27070;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000200.1	RefSeq	gene	30495	31134	.	-	.	ID=gene-STY7866_RS08200;Name=STY7866_RS08200;end_range=31134,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08200;partial=true
NZ_CAAR01000200.1	Protein Homology	CDS	30495	31134	.	-	1	ID=cds-WP_000419505.1;Parent=gene-STY7866_RS08200;Dbxref=Genbank:WP_000419505.1;Name=WP_000419505.1;end_range=31134,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129486.1;locus_tag=STY7866_RS08200;partial=true;product=TRAP transporter large permease subunit;protein_id=WP_000419505.1;transl_table=11
##sequence-region NZ_CAAR01000199.1 1 11002
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000199.1	RefSeq	region	1	11002	.	+	.	ID=NZ_CAAR01000199.1:1..11002;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000199.1	RefSeq	gene	106	1245	.	-	.	ID=gene-STY7866_RS08000;Name=STY7866_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08000
NZ_CAAR01000199.1	Protein Homology	CDS	106	1245	.	-	0	ID=cds-WP_001078027.1;Parent=gene-STY7866_RS08000;Dbxref=Genbank:WP_001078027.1;Name=WP_001078027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458113.1;locus_tag=STY7866_RS08000;product=BamA/TamA family outer membrane protein;protein_id=WP_001078027.1;transl_table=11
NZ_CAAR01000199.1	RefSeq	gene	1242	2264	.	-	.	ID=gene-STY7866_RS08005;Name=STY7866_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08005
NZ_CAAR01000199.1	Protein Homology	CDS	1242	2264	.	-	0	ID=cds-WP_000747401.1;Parent=gene-STY7866_RS08005;Dbxref=Genbank:WP_000747401.1;Name=WP_000747401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458112.1;locus_tag=STY7866_RS08005;product=hypothetical protein;protein_id=WP_000747401.1;transl_table=11
NZ_CAAR01000199.1	RefSeq	gene	2466	3278	.	-	.	ID=gene-STY7866_RS08015;Name=STY7866_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08015
NZ_CAAR01000199.1	Protein Homology	CDS	2466	3278	.	-	0	ID=cds-WP_000985571.1;Parent=gene-STY7866_RS08015;Dbxref=Genbank:WP_000985571.1;Name=WP_000985571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458111.1;locus_tag=STY7866_RS08015;product=sugar-phosphatase;protein_id=WP_000985571.1;transl_table=11
NZ_CAAR01000199.1	RefSeq	gene	3567	4829	.	+	.	ID=gene-STY7866_RS08020;Name=STY7866_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08020
NZ_CAAR01000199.1	Protein Homology	CDS	3567	4829	.	+	0	ID=cds-WP_000061243.1;Parent=gene-STY7866_RS08020;Dbxref=Genbank:WP_000061243.1;Name=WP_000061243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458110.1;locus_tag=STY7866_RS08020;product=MFS transporter;protein_id=WP_000061243.1;transl_table=11
NZ_CAAR01000199.1	RefSeq	gene	4843	6036	.	+	.	ID=gene-STY7866_RS08025;Name=STY7866_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS08025
NZ_CAAR01000199.1	Protein Homology	CDS	4843	6036	.	+	0	ID=cds-WP_000975831.1;Parent=gene-STY7866_RS08025;Dbxref=Genbank:WP_000975831.1;Name=WP_000975831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458109.1;locus_tag=STY7866_RS08025;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000975831.1;transl_table=11
NZ_CAAR01000199.1	RefSeq	pseudogene	6151	7060	.	+	.	ID=gene-STY7866_RS08030;Name=STY7866_RS08030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS08030;pseudo=true
NZ_CAAR01000199.1	Protein Homology	CDS	6151	7060	.	+	0	ID=cds-STY7866_RS08030;Parent=gene-STY7866_RS08030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458108.1;locus_tag=STY7866_RS08030;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
NZ_CAAR01000199.1	RefSeq	pseudogene	7067	9482	.	-	.	ID=gene-STY7866_RS08035;Name=STY7866_RS08035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS08035;pseudo=true
NZ_CAAR01000199.1	Protein Homology	CDS	7067	9482	.	-	0	ID=cds-STY7866_RS08035;Parent=gene-STY7866_RS08035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458107.1;locus_tag=STY7866_RS08035;product=DNA gyrase subunit B;pseudo=true;transl_table=11
NZ_CAAR01000199.1	RefSeq	gene	9511	10584	.	-	.	ID=gene-STY7866_RS08040;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=STY7866_RS08040
NZ_CAAR01000199.1	Protein Homology	CDS	9511	10584	.	-	0	ID=cds-WP_000059373.1;Parent=gene-STY7866_RS08040;Dbxref=Genbank:WP_000059373.1;Name=WP_000059373.1;gbkey=CDS;gene=recF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=STY7866_RS08040;product=DNA replication/repair protein RecF;protein_id=WP_000059373.1;transl_table=11
NZ_CAAR01000199.1	RefSeq	pseudogene	10782	11002	.	-	.	ID=gene-STY7866_RS08045;Name=STY7866_RS08045;end_range=11002,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS08045;partial=true;pseudo=true
NZ_CAAR01000199.1	Protein Homology	CDS	10782	11002	.	-	2	ID=cds-STY7866_RS08045;Parent=gene-STY7866_RS08045;Note=binds the polymerase to DNA and acts as a sliding clamp%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=11002,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=STY7866_RS08045;partial=true;product=DNA polymerase III subunit beta;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000198.1 1 7772
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000198.1	RefSeq	region	1	7772	.	+	.	ID=NZ_CAAR01000198.1:1..7772;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000198.1	RefSeq	gene	1	818	.	+	.	ID=gene-STY7866_RS07960;Name=STY7866_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07960;partial=true;start_range=.,1
NZ_CAAR01000198.1	Protein Homology	CDS	1	818	.	+	2	ID=cds-WP_000530206.1;Parent=gene-STY7866_RS07960;Dbxref=Genbank:WP_000530206.1;Name=WP_000530206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456156.1;locus_tag=STY7866_RS07960;partial=true;product=cation:dicarboxylase symporter family transporter;protein_id=WP_000530206.1;start_range=.,1;transl_table=11
NZ_CAAR01000198.1	RefSeq	gene	1106	1294	.	-	.	ID=gene-STY7866_RS07965;Name=STY7866_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07965
NZ_CAAR01000198.1	Protein Homology	CDS	1106	1294	.	-	0	ID=cds-WP_001682019.1;Parent=gene-STY7866_RS07965;Dbxref=Genbank:WP_001682019.1;Name=WP_001682019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=STY7866_RS07965;product=hypothetical protein;protein_id=WP_001682019.1;transl_table=11
NZ_CAAR01000198.1	RefSeq	gene	1393	1803	.	-	.	ID=gene-STY7866_RS07970;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=STY7866_RS07970
NZ_CAAR01000198.1	Protein Homology	CDS	1393	1803	.	-	0	ID=cds-WP_000637930.1;Parent=gene-STY7866_RS07970;Dbxref=Genbank:WP_000637930.1;Name=WP_000637930.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=STY7866_RS07970;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637930.1;transl_table=11
NZ_CAAR01000198.1	RefSeq	pseudogene	1800	4855	.	-	.	ID=gene-STY7866_RS07975;Name=STY7866_RS07975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07975;pseudo=true
NZ_CAAR01000198.1	Protein Homology	CDS	1800	4855	.	-	0	ID=cds-STY7866_RS07975;Parent=gene-STY7866_RS07975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456159.1;locus_tag=STY7866_RS07975;product=FAD-binding oxidoreductase;pseudo=true;transl_table=11
NZ_CAAR01000198.1	RefSeq	gene	5120	6238	.	+	.	ID=gene-STY7866_RS07980;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=STY7866_RS07980
NZ_CAAR01000198.1	Protein Homology	CDS	5120	6238	.	+	0	ID=cds-WP_000248612.1;Parent=gene-STY7866_RS07980;Dbxref=Genbank:WP_000248612.1;Name=WP_000248612.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456160.1;locus_tag=STY7866_RS07980;product=AI-2E family transporter YdiK;protein_id=WP_000248612.1;transl_table=11
NZ_CAAR01000198.1	RefSeq	gene	6421	6528	.	+	.	ID=gene-STY7866_RS27065;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=STY7866_RS27065
NZ_CAAR01000198.1	cmsearch	antisense_RNA	6421	6528	.	+	.	ID=rna-STY7866_RS27065;Parent=gene-STY7866_RS27065;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS27065;product=antisense sRNA RprA
NZ_CAAR01000198.1	cmsearch	exon	6421	6528	.	+	.	ID=exon-STY7866_RS27065-1;Parent=rna-STY7866_RS27065;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS27065;product=antisense sRNA RprA
NZ_CAAR01000198.1	RefSeq	gene	6593	7351	.	+	.	ID=gene-STY7866_RS07985;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=STY7866_RS07985
NZ_CAAR01000198.1	Protein Homology	CDS	6593	7351	.	+	0	ID=cds-WP_000860215.1;Parent=gene-STY7866_RS07985;Dbxref=Genbank:WP_000860215.1;Name=WP_000860215.1;gbkey=CDS;gene=aroD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456161.1;locus_tag=STY7866_RS07985;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860215.1;transl_table=11
NZ_CAAR01000198.1	RefSeq	pseudogene	7451	7772	.	-	.	ID=gene-STY7866_RS07990;Name=STY7866_RS07990;end_range=7772,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07990;partial=true;pseudo=true
NZ_CAAR01000198.1	Protein Homology	CDS	7451	7772	.	-	1	ID=cds-STY7866_RS07990;Parent=gene-STY7866_RS07990;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7772,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310436.1;locus_tag=STY7866_RS07990;partial=true;product=phosphoenolpyruvate synthase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000197.1 1 805
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000197.1	RefSeq	region	1	805	.	+	.	ID=NZ_CAAR01000197.1:1..805;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000197.1	RefSeq	gene	129	805	.	-	.	ID=gene-STY7866_RS07955;Name=STY7866_RS07955;end_range=805,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07955;partial=true
NZ_CAAR01000197.1	Protein Homology	CDS	129	805	.	-	2	ID=cds-WP_000300317.1;Parent=gene-STY7866_RS07955;Dbxref=Genbank:WP_000300317.1;Name=WP_000300317.1;end_range=805,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000975154.1;locus_tag=STY7866_RS07955;partial=true;product=SH3 domain-containing protein;protein_id=WP_000300317.1;transl_table=11
##sequence-region NZ_CAAR01000196.1 1 386
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000196.1	RefSeq	region	1	386	.	+	.	ID=NZ_CAAR01000196.1:1..386;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000196.1	RefSeq	pseudogene	146	386	.	-	.	ID=gene-STY7866_RS07950;Name=STY7866_RS07950;end_range=386,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07950;partial=true;pseudo=true
NZ_CAAR01000196.1	Protein Homology	CDS	146	386	.	-	1	ID=cds-STY7866_RS07950;Parent=gene-STY7866_RS07950;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=386,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114529.1;locus_tag=STY7866_RS07950;partial=true;product=integrase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000195.1 1 11047
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000195.1	RefSeq	region	1	11047	.	+	.	ID=NZ_CAAR01000195.1:1..11047;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000195.1	RefSeq	pseudogene	1	223	.	+	.	ID=gene-STY7866_RS07890;Name=STY7866_RS07890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07890;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000195.1	Protein Homology	CDS	1	223	.	+	1	ID=cds-STY7866_RS07890;Parent=gene-STY7866_RS07890;Note=hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455014.1;locus_tag=STY7866_RS07890;partial=true;product=phosphatidylglycerophosphatase A;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000195.1	RefSeq	gene	327	1301	.	-	.	ID=gene-STY7866_RS07895;Name=STY7866_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07895
NZ_CAAR01000195.1	Protein Homology	CDS	327	1301	.	-	0	ID=cds-WP_001199865.1;Parent=gene-STY7866_RS07895;Dbxref=Genbank:WP_001199865.1;Name=WP_001199865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455015.1;locus_tag=STY7866_RS07895;product=aldo/keto reductase;protein_id=WP_001199865.1;transl_table=11
NZ_CAAR01000195.1	RefSeq	gene	1358	3220	.	-	.	ID=gene-STY7866_RS07900;Name=STY7866_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07900
NZ_CAAR01000195.1	Protein Homology	CDS	1358	3220	.	-	0	ID=cds-WP_000006791.1;Parent=gene-STY7866_RS07900;Dbxref=Genbank:WP_000006791.1;Name=WP_000006791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455016.1;locus_tag=STY7866_RS07900;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006791.1;transl_table=11
NZ_CAAR01000195.1	RefSeq	gene	3244	4143	.	-	.	ID=gene-STY7866_RS07905;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=STY7866_RS07905
NZ_CAAR01000195.1	Protein Homology	CDS	3244	4143	.	-	0	ID=cds-WP_000348078.1;Parent=gene-STY7866_RS07905;Dbxref=Genbank:WP_000348078.1;Name=WP_000348078.1;gbkey=CDS;gene=ispA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455017.1;locus_tag=STY7866_RS07905;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000348078.1;transl_table=11
NZ_CAAR01000195.1	RefSeq	gene	4144	4386	.	-	.	ID=gene-STY7866_RS07910;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=STY7866_RS07910
NZ_CAAR01000195.1	Protein Homology	CDS	4144	4386	.	-	0	ID=cds-WP_001124944.1;Parent=gene-STY7866_RS07910;Dbxref=Genbank:WP_001124944.1;Name=WP_001124944.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455018.1;locus_tag=STY7866_RS07910;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124944.1;transl_table=11
NZ_CAAR01000195.1	RefSeq	gene	4596	6044	.	+	.	ID=gene-STY7866_RS07915;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=STY7866_RS07915
NZ_CAAR01000195.1	Protein Homology	CDS	4596	6044	.	+	0	ID=cds-WP_000668658.1;Parent=gene-STY7866_RS07915;Dbxref=Genbank:WP_000668658.1;Name=WP_000668658.1;gbkey=CDS;gene=thiI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=STY7866_RS07915;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WP_000668658.1;transl_table=11
NZ_CAAR01000195.1	RefSeq	gene	6094	6885	.	-	.	ID=gene-STY7866_RS07920;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=STY7866_RS07920
NZ_CAAR01000195.1	Protein Homology	CDS	6094	6885	.	-	0	ID=cds-WP_000909802.1;Parent=gene-STY7866_RS07920;Dbxref=Genbank:WP_000909802.1;Name=WP_000909802.1;gbkey=CDS;gene=phnV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455020.1;locus_tag=STY7866_RS07920;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_000909802.1;transl_table=11
NZ_CAAR01000195.1	RefSeq	gene	6879	7748	.	-	.	ID=gene-STY7866_RS07925;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=STY7866_RS07925
NZ_CAAR01000195.1	Protein Homology	CDS	6879	7748	.	-	0	ID=cds-WP_000052708.1;Parent=gene-STY7866_RS07925;Dbxref=Genbank:WP_000052708.1;Name=WP_000052708.1;gbkey=CDS;gene=phnU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455021.1;locus_tag=STY7866_RS07925;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_000052708.1;transl_table=11
NZ_CAAR01000195.1	RefSeq	gene	7751	8860	.	-	.	ID=gene-STY7866_RS07930;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=STY7866_RS07930
NZ_CAAR01000195.1	Protein Homology	CDS	7751	8860	.	-	0	ID=cds-WP_000928794.1;Parent=gene-STY7866_RS07930;Dbxref=Genbank:WP_000928794.1;Name=WP_000928794.1;gbkey=CDS;gene=phnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455022.1;locus_tag=STY7866_RS07930;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_000928794.1;transl_table=11
NZ_CAAR01000195.1	RefSeq	gene	8866	9879	.	-	.	ID=gene-STY7866_RS07935;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=STY7866_RS07935
NZ_CAAR01000195.1	Protein Homology	CDS	8866	9879	.	-	0	ID=cds-WP_000778002.1;Parent=gene-STY7866_RS07935;Dbxref=Genbank:WP_000778002.1;Name=WP_000778002.1;gbkey=CDS;gene=phnS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455023.1;locus_tag=STY7866_RS07935;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_000778002.1;transl_table=11
NZ_CAAR01000195.1	RefSeq	gene	10077	10796	.	-	.	ID=gene-STY7866_RS07940;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=STY7866_RS07940
NZ_CAAR01000195.1	Protein Homology	CDS	10077	10796	.	-	0	ID=cds-WP_000836268.1;Parent=gene-STY7866_RS07940;Dbxref=Genbank:WP_000836268.1;Name=WP_000836268.1;gbkey=CDS;gene=phnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455024.1;locus_tag=STY7866_RS07940;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_000836268.1;transl_table=11
NZ_CAAR01000195.1	RefSeq	pseudogene	10936	11047	.	+	.	ID=gene-STY7866_RS27060;Name=STY7866_RS27060;end_range=11047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27060;partial=true;pseudo=true
NZ_CAAR01000195.1	Protein Homology	CDS	10936	11047	.	+	0	ID=cds-STY7866_RS27060;Parent=gene-STY7866_RS27060;Note=catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=11047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455025.1;locus_tag=STY7866_RS27060;partial=true;product=2-aminoethylphosphonate--pyruvate transaminase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000194.1 1 7475
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000194.1	RefSeq	region	1	7475	.	+	.	ID=NZ_CAAR01000194.1:1..7475;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000194.1	RefSeq	pseudogene	1	462	.	+	.	ID=gene-STY7866_RS07815;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=pseudogene;gene_synonym=sapG;locus_tag=STY7866_RS07815;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000194.1	Protein Homology	CDS	1	462	.	+	0	ID=cds-STY7866_RS07815;Parent=gene-STY7866_RS07815;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=trkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=STY7866_RS07815;partial=true;product=Trk system potassium transporter TrkA;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000194.1	RefSeq	gene	604	1017	.	+	.	ID=gene-STY7866_RS07820;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=STY7866_RS07820
NZ_CAAR01000194.1	Protein Homology	CDS	604	1017	.	+	0	ID=cds-WP_000008119.1;Parent=gene-STY7866_RS07820;Dbxref=Genbank:WP_000008119.1;Name=WP_000008119.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458489.1;locus_tag=STY7866_RS07820;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000008119.1;transl_table=11
NZ_CAAR01000194.1	RefSeq	gene	953	1222	.	-	.	ID=gene-STY7866_RS07825;Name=STY7866_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07825
NZ_CAAR01000194.1	Protein Homology	CDS	953	1222	.	-	0	ID=cds-WP_001543084.1;Parent=gene-STY7866_RS07825;Dbxref=Genbank:WP_001543084.1;Name=WP_001543084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462315.1;locus_tag=STY7866_RS07825;product=alternative ribosome-rescue factor A;protein_id=WP_001543084.1;transl_table=11
NZ_CAAR01000194.1	RefSeq	gene	1281	1706	.	-	.	ID=gene-STY7866_RS07830;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=STY7866_RS07830
NZ_CAAR01000194.1	Protein Homology	CDS	1281	1706	.	-	0	ID=cds-WP_000285589.1;Parent=gene-STY7866_RS07830;Dbxref=Genbank:WP_000285589.1;Name=WP_000285589.1;gbkey=CDS;gene=zntR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458488.1;locus_tag=STY7866_RS07830;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285589.1;transl_table=11
NZ_CAAR01000194.1	RefSeq	gene	1717	2085	.	-	.	ID=gene-STY7866_RS07835;Name=STY7866_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07835
NZ_CAAR01000194.1	Protein Homology	CDS	1717	2085	.	-	0	ID=cds-WP_000266513.1;Parent=gene-STY7866_RS07835;Dbxref=Genbank:WP_000266513.1;Name=WP_000266513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458487.1;locus_tag=STY7866_RS07835;product=DUF1992 domain-containing protein;protein_id=WP_000266513.1;transl_table=11
NZ_CAAR01000194.1	RefSeq	gene	2192	2575	.	-	.	ID=gene-STY7866_RS07840;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=STY7866_RS07840
NZ_CAAR01000194.1	Protein Homology	CDS	2192	2575	.	-	0	ID=cds-WP_001216370.1;Parent=gene-STY7866_RS07840;Dbxref=Genbank:WP_001216370.1;Name=WP_001216370.1;gbkey=CDS;gene=rplQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458486.1;locus_tag=STY7866_RS07840;product=50S ribosomal protein L17;protein_id=WP_001216370.1;transl_table=11
NZ_CAAR01000194.1	RefSeq	gene	2616	3605	.	-	.	ID=gene-STY7866_RS07845;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=STY7866_RS07845
NZ_CAAR01000194.1	Protein Homology	CDS	2616	3605	.	-	0	ID=cds-WP_001162094.1;Parent=gene-STY7866_RS07845;Dbxref=Genbank:WP_001162094.1;Name=WP_001162094.1;gbkey=CDS;gene=rpoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=STY7866_RS07845;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11
NZ_CAAR01000194.1	RefSeq	gene	3631	4251	.	-	.	ID=gene-STY7866_RS07850;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=STY7866_RS07850
NZ_CAAR01000194.1	Protein Homology	CDS	3631	4251	.	-	0	ID=cds-WP_000135229.1;Parent=gene-STY7866_RS07850;Dbxref=Genbank:WP_000135229.1;Name=WP_000135229.1;gbkey=CDS;gene=rpsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006704135.1;locus_tag=STY7866_RS07850;product=30S ribosomal protein S4;protein_id=WP_000135229.1;transl_table=11
NZ_CAAR01000194.1	RefSeq	gene	4285	4674	.	-	.	ID=gene-STY7866_RS07855;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=STY7866_RS07855
NZ_CAAR01000194.1	Protein Homology	CDS	4285	4674	.	-	0	ID=cds-WP_001029757.1;Parent=gene-STY7866_RS07855;Dbxref=Genbank:WP_001029757.1;Name=WP_001029757.1;gbkey=CDS;gene=rpsK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=STY7866_RS07855;product=30S ribosomal protein S11;protein_id=WP_001029757.1;transl_table=11
NZ_CAAR01000194.1	RefSeq	gene	4691	5047	.	-	.	ID=gene-STY7866_RS07860;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=STY7866_RS07860
NZ_CAAR01000194.1	Protein Homology	CDS	4691	5047	.	-	0	ID=cds-WP_000090779.1;Parent=gene-STY7866_RS07860;Dbxref=Genbank:WP_000090779.1;Name=WP_000090779.1;gbkey=CDS;gene=rpsM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017051447.1;locus_tag=STY7866_RS07860;product=30S ribosomal protein S13;protein_id=WP_000090779.1;transl_table=11
NZ_CAAR01000194.1	RefSeq	gene	5194	5310	.	-	.	ID=gene-STY7866_RS07865;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=STY7866_RS07865
NZ_CAAR01000194.1	Protein Homology	CDS	5194	5310	.	-	0	ID=cds-WP_000868187.1;Parent=gene-STY7866_RS07865;Dbxref=Genbank:WP_000868187.1;Name=WP_000868187.1;gbkey=CDS;gene=rpmJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=STY7866_RS07865;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11
NZ_CAAR01000194.1	RefSeq	gene	5342	6673	.	-	.	ID=gene-STY7866_RS07870;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=STY7866_RS07870
NZ_CAAR01000194.1	Protein Homology	CDS	5342	6673	.	-	0	ID=cds-WP_001118863.1;Parent=gene-STY7866_RS07870;Dbxref=Genbank:WP_001118863.1;Name=WP_001118863.1;gbkey=CDS;gene=secY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=STY7866_RS07870;product=preprotein translocase subunit SecY;protein_id=WP_001118863.1;transl_table=11
NZ_CAAR01000194.1	RefSeq	gene	6681	7115	.	-	.	ID=gene-STY7866_RS07875;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=STY7866_RS07875
NZ_CAAR01000194.1	Protein Homology	CDS	6681	7115	.	-	0	ID=cds-WP_001238917.1;Parent=gene-STY7866_RS07875;Dbxref=Genbank:WP_001238917.1;Name=WP_001238917.1;gbkey=CDS;gene=rplO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=STY7866_RS07875;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11
NZ_CAAR01000194.1	RefSeq	gene	7119	7298	.	-	.	ID=gene-STY7866_RS07880;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=STY7866_RS07880
NZ_CAAR01000194.1	Protein Homology	CDS	7119	7298	.	-	0	ID=cds-WP_001140434.1;Parent=gene-STY7866_RS07880;Dbxref=Genbank:WP_001140434.1;Name=WP_001140434.1;gbkey=CDS;gene=rpmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=STY7866_RS07880;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11
NZ_CAAR01000194.1	RefSeq	pseudogene	7302	7475	.	-	.	ID=gene-STY7866_RS07885;Name=rpsE;end_range=7475,.;gbkey=Gene;gene=rpsE;gene_biotype=pseudogene;locus_tag=STY7866_RS07885;partial=true;pseudo=true
NZ_CAAR01000194.1	Protein Homology	CDS	7302	7475	.	-	0	ID=cds-STY7866_RS07885;Parent=gene-STY7866_RS07885;Note=located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body%3B contacts S4 and S8%3B with S4 and S12 plays a role in translational accuracy%3B mutations in this gene result in spectinomycin resistance%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7475,.;gbkey=CDS;gene=rpsE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=STY7866_RS07885;partial=true;product=30S ribosomal protein S5;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000193.1 1 3875
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000193.1	RefSeq	region	1	3875	.	+	.	ID=NZ_CAAR01000193.1:1..3875;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000193.1	RefSeq	gene	1	196	.	+	.	ID=gene-STY7866_RS27055;Name=STY7866_RS27055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27055;partial=true;start_range=.,1
NZ_CAAR01000193.1	Protein Homology	CDS	1	196	.	+	1	ID=cds-WP_024151041.1;Parent=gene-STY7866_RS27055;Dbxref=Genbank:WP_024151041.1;Name=WP_024151041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456919.1;locus_tag=STY7866_RS27055;partial=true;product=CPBP family intramembrane metalloprotease;protein_id=WP_024151041.1;start_range=.,1;transl_table=11
NZ_CAAR01000193.1	RefSeq	gene	263	781	.	-	.	ID=gene-STY7866_RS07785;Name=STY7866_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07785
NZ_CAAR01000193.1	Protein Homology	CDS	263	781	.	-	0	ID=cds-WP_000847532.1;Parent=gene-STY7866_RS07785;Dbxref=Genbank:WP_000847532.1;Name=WP_000847532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456918.1;locus_tag=STY7866_RS07785;product=YbjP/YqhG family protein;protein_id=WP_000847532.1;transl_table=11
NZ_CAAR01000193.1	RefSeq	gene	781	1149	.	-	.	ID=gene-STY7866_RS07790;Name=STY7866_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07790
NZ_CAAR01000193.1	Protein Homology	CDS	781	1149	.	-	0	ID=cds-WP_000118257.1;Parent=gene-STY7866_RS07790;Dbxref=Genbank:WP_000118257.1;Name=WP_000118257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456917.1;locus_tag=STY7866_RS07790;product=hypothetical protein;protein_id=WP_000118257.1;transl_table=11
NZ_CAAR01000193.1	RefSeq	gene	1318	1566	.	-	.	ID=gene-STY7866_RS07795;Name=STY7866_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07795
NZ_CAAR01000193.1	Protein Homology	CDS	1318	1566	.	-	0	ID=cds-WP_000433427.1;Parent=gene-STY7866_RS07795;Dbxref=Genbank:WP_000433427.1;Name=WP_000433427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456916.1;locus_tag=STY7866_RS07795;product=transcriptional regulator;protein_id=WP_000433427.1;transl_table=11
NZ_CAAR01000193.1	RefSeq	gene	1738	2112	.	+	.	ID=gene-STY7866_RS07800;Name=STY7866_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07800
NZ_CAAR01000193.1	Protein Homology	CDS	1738	2112	.	+	0	ID=cds-WP_001051260.1;Parent=gene-STY7866_RS07800;Dbxref=Genbank:WP_001051260.1;Name=WP_001051260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456915.1;locus_tag=STY7866_RS07800;product=hypothetical protein;protein_id=WP_001051260.1;transl_table=11
NZ_CAAR01000193.1	RefSeq	gene	2292	3470	.	+	.	ID=gene-STY7866_RS07805;Name=STY7866_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07805
NZ_CAAR01000193.1	Protein Homology	CDS	2292	3470	.	+	0	ID=cds-WP_000127714.1;Parent=gene-STY7866_RS07805;Dbxref=Genbank:WP_000127714.1;Name=WP_000127714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456914.1;locus_tag=STY7866_RS07805;product=MFS transporter;protein_id=WP_000127714.1;transl_table=11
NZ_CAAR01000193.1	RefSeq	pseudogene	3467	3875	.	-	.	ID=gene-STY7866_RS07810;Name=flk;end_range=3875,.;gbkey=Gene;gene=flk;gene_biotype=pseudogene;locus_tag=STY7866_RS07810;partial=true;pseudo=true
NZ_CAAR01000193.1	Protein Homology	CDS	3467	3875	.	-	1	ID=cds-STY7866_RS07810;Parent=gene-STY7866_RS07810;Note=in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system%3B lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm%3B inner membrane-anchored protein%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3875,.;gbkey=CDS;gene=flk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456913.1;locus_tag=STY7866_RS07810;partial=true;product=flagella biosynthesis regulator Flk;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000192.1 1 5047
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000192.1	RefSeq	region	1	5047	.	+	.	ID=NZ_CAAR01000192.1:1..5047;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000192.1	RefSeq	pseudogene	1	252	.	-	.	ID=gene-STY7866_RS07755;Name=STY7866_RS07755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07755;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000192.1	Protein Homology	CDS	1	252	.	-	0	ID=cds-STY7866_RS07755;Parent=gene-STY7866_RS07755;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457784.1;locus_tag=STY7866_RS07755;partial=true;product=carboxymethylenebutenolidase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000192.1	RefSeq	gene	511	1272	.	+	.	ID=gene-STY7866_RS07760;Name=STY7866_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07760
NZ_CAAR01000192.1	Protein Homology	CDS	511	1272	.	+	0	ID=cds-WP_000045169.1;Parent=gene-STY7866_RS07760;Dbxref=Genbank:WP_000045169.1;Name=WP_000045169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457783.1;locus_tag=STY7866_RS07760;product=uridine phosphorylase;protein_id=WP_000045169.1;transl_table=11
NZ_CAAR01000192.1	RefSeq	gene	1412	2842	.	+	.	ID=gene-STY7866_RS07765;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=STY7866_RS07765
NZ_CAAR01000192.1	Protein Homology	CDS	1412	2842	.	+	0	ID=cds-WP_000355562.1;Parent=gene-STY7866_RS07765;Dbxref=Genbank:WP_000355562.1;Name=WP_000355562.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457782.1;locus_tag=STY7866_RS07765;product=DNA recombination protein RmuC;protein_id=WP_000355562.1;transl_table=11
NZ_CAAR01000192.1	RefSeq	gene	2938	3693	.	+	.	ID=gene-STY7866_RS07770;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=STY7866_RS07770
NZ_CAAR01000192.1	Protein Homology	CDS	2938	3693	.	+	0	ID=cds-WP_000229009.1;Parent=gene-STY7866_RS07770;Dbxref=Genbank:WP_000229009.1;Name=WP_000229009.1;gbkey=CDS;gene=ubiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457781.1;locus_tag=STY7866_RS07770;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000229009.1;transl_table=11
NZ_CAAR01000192.1	RefSeq	gene	3703	4308	.	+	.	ID=gene-STY7866_RS07775;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=STY7866_RS07775
NZ_CAAR01000192.1	Protein Homology	CDS	3703	4308	.	+	0	ID=cds-WP_001116094.1;Parent=gene-STY7866_RS07775;Dbxref=Genbank:WP_001116094.1;Name=WP_001116094.1;gbkey=CDS;gene=ubiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457780.1;locus_tag=STY7866_RS07775;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001116094.1;transl_table=11
NZ_CAAR01000192.1	RefSeq	pseudogene	4305	5047	.	+	.	ID=gene-STY7866_RS07780;Name=ubiB;end_range=5047,.;gbkey=Gene;gene=ubiB;gene_biotype=pseudogene;gene_synonym=aarF,yigQ,yigR;locus_tag=STY7866_RS07780;partial=true;pseudo=true
NZ_CAAR01000192.1	Protein Homology	CDS	4305	5047	.	+	0	ID=cds-STY7866_RS07780;Parent=gene-STY7866_RS07780;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5047,.;gbkey=CDS;gene=ubiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457779.1;locus_tag=STY7866_RS07780;partial=true;product=ubiquinone biosynthesis regulatory protein kinase UbiB;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000191.1 1 8340
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000191.1	RefSeq	region	1	8340	.	+	.	ID=NZ_CAAR01000191.1:1..8340;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000191.1	RefSeq	gene	1	1148	.	-	.	ID=gene-STY7866_RS07720;Name=STY7866_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07720;partial=true;start_range=.,1
NZ_CAAR01000191.1	Protein Homology	CDS	1	1148	.	-	0	ID=cds-WP_001012870.1;Parent=gene-STY7866_RS07720;Dbxref=Genbank:WP_001012870.1;Name=WP_001012870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456875.1;locus_tag=STY7866_RS07720;partial=true;product=citrate transporter;protein_id=WP_001012870.1;start_range=.,1;transl_table=11
NZ_CAAR01000191.1	RefSeq	gene	1224	1901	.	-	.	ID=gene-STY7866_RS07725;Name=STY7866_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07725
NZ_CAAR01000191.1	Protein Homology	CDS	1224	1901	.	-	0	ID=cds-WP_021013205.1;Parent=gene-STY7866_RS07725;Dbxref=Genbank:WP_021013205.1;Name=WP_021013205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456876.3;locus_tag=STY7866_RS07725;product=sugar phosphatase;protein_id=WP_021013205.1;transl_table=11
NZ_CAAR01000191.1	RefSeq	gene	1894	2388	.	-	.	ID=gene-STY7866_RS07730;Name=STY7866_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07730
NZ_CAAR01000191.1	Protein Homology	CDS	1894	2388	.	-	0	ID=cds-WP_000426135.1;Parent=gene-STY7866_RS07730;Dbxref=Genbank:WP_000426135.1;Name=WP_000426135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=STY7866_RS07730;product=YfbU family protein;protein_id=WP_000426135.1;transl_table=11
NZ_CAAR01000191.1	RefSeq	gene	2471	2926	.	-	.	ID=gene-STY7866_RS07735;Name=STY7866_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07735
NZ_CAAR01000191.1	Protein Homology	CDS	2471	2926	.	-	0	ID=cds-WP_000106616.1;Parent=gene-STY7866_RS07735;Dbxref=Genbank:WP_000106616.1;Name=WP_000106616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=STY7866_RS07735;product=DUF412 domain-containing protein;protein_id=WP_000106616.1;transl_table=11
NZ_CAAR01000191.1	RefSeq	gene	3266	4468	.	+	.	ID=gene-STY7866_RS07740;Name=STY7866_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07740
NZ_CAAR01000191.1	Protein Homology	CDS	3266	4468	.	+	0	ID=cds-WP_000095689.1;Parent=gene-STY7866_RS07740;Dbxref=Genbank:WP_000095689.1;Name=WP_000095689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=STY7866_RS07740;product=acetate kinase;protein_id=WP_000095689.1;transl_table=11
NZ_CAAR01000191.1	RefSeq	gene	4545	6689	.	+	.	ID=gene-STY7866_RS07745;Name=STY7866_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07745
NZ_CAAR01000191.1	Protein Homology	CDS	4545	6689	.	+	0	ID=cds-WP_000086696.1;Parent=gene-STY7866_RS07745;Dbxref=Genbank:WP_000086696.1;Name=WP_000086696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456880.1;locus_tag=STY7866_RS07745;product=phosphate acetyltransferase;protein_id=WP_000086696.1;transl_table=11
NZ_CAAR01000191.1	RefSeq	gene	6907	8340	.	+	.	ID=gene-STY7866_RS07750;Name=yfcC;end_range=8340,.;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=STY7866_RS07750;partial=true
NZ_CAAR01000191.1	Protein Homology	CDS	6907	8340	.	+	0	ID=cds-WP_049783573.1;Parent=gene-STY7866_RS07750;Dbxref=Genbank:WP_049783573.1;Name=WP_049783573.1;end_range=8340,.;gbkey=CDS;gene=yfcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456881.1;locus_tag=STY7866_RS07750;partial=true;product=putative basic amino acid antiporter YfcC;protein_id=WP_049783573.1;transl_table=11
##sequence-region NZ_CAAR01000190.1 1 15863
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000190.1	RefSeq	region	1	15863	.	+	.	ID=NZ_CAAR01000190.1:1..15863;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000190.1	RefSeq	gene	1	586	.	-	.	ID=gene-STY7866_RS07650;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=STY7866_RS07650;partial=true;start_range=.,1
NZ_CAAR01000190.1	Protein Homology	CDS	1	586	.	-	0	ID=cds-WP_000462796.1;Parent=gene-STY7866_RS07650;Dbxref=Genbank:WP_000462796.1;Name=WP_000462796.1;gbkey=CDS;gene=ftsZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=STY7866_RS07650;partial=true;product=cell division protein FtsZ;protein_id=WP_000462796.1;start_range=.,1;transl_table=11
NZ_CAAR01000190.1	RefSeq	gene	647	1909	.	-	.	ID=gene-STY7866_RS07655;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=STY7866_RS07655
NZ_CAAR01000190.1	Protein Homology	CDS	647	1909	.	-	0	ID=cds-WP_000588458.1;Parent=gene-STY7866_RS07655;Dbxref=Genbank:WP_000588458.1;Name=WP_000588458.1;gbkey=CDS;gene=ftsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374018.1;locus_tag=STY7866_RS07655;product=cell division protein FtsA;protein_id=WP_000588458.1;transl_table=11
NZ_CAAR01000190.1	RefSeq	gene	1906	2736	.	-	.	ID=gene-STY7866_RS07660;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=STY7866_RS07660
NZ_CAAR01000190.1	Protein Homology	CDS	1906	2736	.	-	0	ID=cds-WP_000075728.1;Parent=gene-STY7866_RS07660;Dbxref=Genbank:WP_000075728.1;Name=WP_000075728.1;gbkey=CDS;gene=ftsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454743.1;locus_tag=STY7866_RS07660;product=cell division protein FtsQ;protein_id=WP_000075728.1;transl_table=11
NZ_CAAR01000190.1	RefSeq	gene	2738	3658	.	-	.	ID=gene-STY7866_RS07665;Name=STY7866_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07665
NZ_CAAR01000190.1	Protein Homology	CDS	2738	3658	.	-	0	ID=cds-WP_000763895.1;Parent=gene-STY7866_RS07665;Dbxref=Genbank:WP_000763895.1;Name=WP_000763895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454742.1;locus_tag=STY7866_RS07665;product=D-alanine--D-alanine ligase;protein_id=WP_000763895.1;transl_table=11
NZ_CAAR01000190.1	RefSeq	gene	3651	5126	.	-	.	ID=gene-STY7866_RS07670;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=STY7866_RS07670
NZ_CAAR01000190.1	Protein Homology	CDS	3651	5126	.	-	0	ID=cds-WP_001096072.1;Parent=gene-STY7866_RS07670;Dbxref=Genbank:WP_001096072.1;Name=WP_001096072.1;gbkey=CDS;gene=murC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454741.1;locus_tag=STY7866_RS07670;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096072.1;transl_table=11
NZ_CAAR01000190.1	RefSeq	gene	5245	6312	.	-	.	ID=gene-STY7866_RS07675;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=STY7866_RS07675
NZ_CAAR01000190.1	Protein Homology	CDS	5245	6312	.	-	0	ID=cds-WP_000016622.1;Parent=gene-STY7866_RS07675;Dbxref=Genbank:WP_000016622.1;Name=WP_000016622.1;gbkey=CDS;gene=murG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454740.1;locus_tag=STY7866_RS07675;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016622.1;transl_table=11
NZ_CAAR01000190.1	RefSeq	pseudogene	6309	7552	.	-	.	ID=gene-STY7866_RS07680;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=pseudogene;locus_tag=STY7866_RS07680;pseudo=true
NZ_CAAR01000190.1	Protein Homology	CDS	6309	7552	.	-	0	ID=cds-STY7866_RS07680;Parent=gene-STY7866_RS07680;Note=frameshifted;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454739.1;locus_tag=STY7866_RS07680;product=cell division protein FtsW;pseudo=true;transl_table=11
NZ_CAAR01000190.1	RefSeq	gene	7552	8868	.	-	.	ID=gene-STY7866_RS07685;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=STY7866_RS07685
NZ_CAAR01000190.1	Protein Homology	CDS	7552	8868	.	-	0	ID=cds-WP_000796441.1;Parent=gene-STY7866_RS07685;Dbxref=Genbank:WP_000796441.1;Name=WP_000796441.1;gbkey=CDS;gene=murD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=STY7866_RS07685;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796441.1;transl_table=11
NZ_CAAR01000190.1	RefSeq	gene	8871	9953	.	-	.	ID=gene-STY7866_RS07690;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=STY7866_RS07690
NZ_CAAR01000190.1	Protein Homology	CDS	8871	9953	.	-	0	ID=cds-WP_000964138.1;Parent=gene-STY7866_RS07690;Dbxref=Genbank:WP_000964138.1;Name=WP_000964138.1;gbkey=CDS;gene=mraY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=STY7866_RS07690;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964138.1;transl_table=11
NZ_CAAR01000190.1	RefSeq	gene	9947	11305	.	-	.	ID=gene-STY7866_RS07695;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=STY7866_RS07695
NZ_CAAR01000190.1	Protein Homology	CDS	9947	11305	.	-	0	ID=cds-WP_000626645.1;Parent=gene-STY7866_RS07695;Dbxref=Genbank:WP_000626645.1;Name=WP_000626645.1;gbkey=CDS;gene=murF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454736.1;locus_tag=STY7866_RS07695;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626645.1;transl_table=11
NZ_CAAR01000190.1	RefSeq	gene	11302	12789	.	-	.	ID=gene-STY7866_RS07700;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=STY7866_RS07700
NZ_CAAR01000190.1	Protein Homology	CDS	11302	12789	.	-	0	ID=cds-WP_000775075.1;Parent=gene-STY7866_RS07700;Dbxref=Genbank:WP_000775075.1;Name=WP_000775075.1;gbkey=CDS;gene=murE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454735.1;locus_tag=STY7866_RS07700;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_000775075.1;transl_table=11
NZ_CAAR01000190.1	RefSeq	gene	12776	14542	.	-	.	ID=gene-STY7866_RS07705;Name=STY7866_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07705
NZ_CAAR01000190.1	Protein Homology	CDS	12776	14542	.	-	0	ID=cds-WP_000642235.1;Parent=gene-STY7866_RS07705;Dbxref=Genbank:WP_000642235.1;Name=WP_000642235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=STY7866_RS07705;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642235.1;transl_table=11
NZ_CAAR01000190.1	RefSeq	gene	14558	14923	.	-	.	ID=gene-STY7866_RS07710;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=STY7866_RS07710
NZ_CAAR01000190.1	Protein Homology	CDS	14558	14923	.	-	0	ID=cds-WP_000625651.1;Parent=gene-STY7866_RS07710;Dbxref=Genbank:WP_000625651.1;Name=WP_000625651.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=STY7866_RS07710;product=cell division protein FtsL;protein_id=WP_000625651.1;transl_table=11
NZ_CAAR01000190.1	RefSeq	gene	14920	15861	.	-	.	ID=gene-STY7866_RS07715;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=STY7866_RS07715
NZ_CAAR01000190.1	Protein Homology	CDS	14920	15861	.	-	0	ID=cds-WP_000970440.1;Parent=gene-STY7866_RS07715;Dbxref=Genbank:WP_000970440.1;Name=WP_000970440.1;gbkey=CDS;gene=rsmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=STY7866_RS07715;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970440.1;transl_table=11
##sequence-region NZ_CAAR01000189.1 1 1934
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000189.1	RefSeq	region	1	1934	.	+	.	ID=NZ_CAAR01000189.1:1..1934;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000189.1	RefSeq	gene	1	1466	.	-	.	ID=gene-STY7866_RS07640;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=STY7866_RS07640;partial=true;start_range=.,1
NZ_CAAR01000189.1	Protein Homology	CDS	1	1466	.	-	0	ID=cds-WP_000871551.1;Parent=gene-STY7866_RS07640;Dbxref=Genbank:WP_000871551.1;Name=WP_000871551.1;gbkey=CDS;gene=bglX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456726.1;locus_tag=STY7866_RS07640;partial=true;product=beta-glucosidase BglX;protein_id=WP_000871551.1;start_range=.,1;transl_table=11
NZ_CAAR01000189.1	RefSeq	pseudogene	1733	1934	.	+	.	ID=gene-STY7866_RS07645;Name=STY7866_RS07645;end_range=1934,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07645;partial=true;pseudo=true
NZ_CAAR01000189.1	Protein Homology	CDS	1733	1934	.	+	0	ID=cds-STY7866_RS07645;Parent=gene-STY7866_RS07645;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1934,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456727.1;locus_tag=STY7866_RS07645;partial=true;product=D-lactate dehydrogenase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000188.1 1 18886
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000188.1	RefSeq	region	1	18886	.	+	.	ID=NZ_CAAR01000188.1:1..18886;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000188.1	RefSeq	gene	1	641	.	+	.	ID=gene-STY7866_RS07555;Name=STY7866_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07555;partial=true;start_range=.,1
NZ_CAAR01000188.1	Protein Homology	CDS	1	641	.	+	2	ID=cds-WP_000630824.1;Parent=gene-STY7866_RS07555;Dbxref=Genbank:WP_000630824.1;Name=WP_000630824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456647.1;locus_tag=STY7866_RS07555;partial=true;product=hypothetical protein;protein_id=WP_000630824.1;start_range=.,1;transl_table=11
NZ_CAAR01000188.1	RefSeq	gene	1018	2103	.	+	.	ID=gene-STY7866_RS07560;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=STY7866_RS07560
NZ_CAAR01000188.1	Protein Homology	CDS	1018	2103	.	+	0	ID=cds-WP_000697846.1;Parent=gene-STY7866_RS07560;Dbxref=Genbank:WP_000697846.1;Name=WP_000697846.1;gbkey=CDS;gene=rfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456646.1;locus_tag=STY7866_RS07560;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000697846.1;transl_table=11
NZ_CAAR01000188.1	RefSeq	pseudogene	2103	3001	.	+	.	ID=gene-STY7866_RS07565;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=pseudogene;locus_tag=STY7866_RS07565;pseudo=true
NZ_CAAR01000188.1	Protein Homology	CDS	2103	3001	.	+	0	ID=cds-STY7866_RS07565;Parent=gene-STY7866_RS07565;Note=frameshifted;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456645.1;locus_tag=STY7866_RS07565;product=dTDP-4-dehydrorhamnose reductase;pseudo=true;transl_table=11
NZ_CAAR01000188.1	RefSeq	gene	3049	3927	.	+	.	ID=gene-STY7866_RS07570;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=STY7866_RS07570
NZ_CAAR01000188.1	Protein Homology	CDS	3049	3927	.	+	0	ID=cds-WP_000857536.1;Parent=gene-STY7866_RS07570;Dbxref=Genbank:WP_000857536.1;Name=WP_000857536.1;gbkey=CDS;gene=rfbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456644.1;locus_tag=STY7866_RS07570;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000857536.1;transl_table=11
NZ_CAAR01000188.1	RefSeq	gene	3928	4479	.	+	.	ID=gene-STY7866_RS07575;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=STY7866_RS07575
NZ_CAAR01000188.1	Protein Homology	CDS	3928	4479	.	+	0	ID=cds-WP_000973711.1;Parent=gene-STY7866_RS07575;Dbxref=Genbank:WP_000973711.1;Name=WP_000973711.1;gbkey=CDS;gene=rfbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456643.1;locus_tag=STY7866_RS07575;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_000973711.1;transl_table=11
NZ_CAAR01000188.1	RefSeq	gene	4485	5459	.	+	.	ID=gene-STY7866_RS07580;Name=STY7866_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07580
NZ_CAAR01000188.1	Protein Homology	CDS	4485	5459	.	+	0	ID=cds-WP_000018220.1;Parent=gene-STY7866_RS07580;Dbxref=Genbank:WP_000018220.1;Name=WP_000018220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456642.1;locus_tag=STY7866_RS07580;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;protein_id=WP_000018220.1;transl_table=11
NZ_CAAR01000188.1	RefSeq	pseudogene	5475	6247	.	+	.	ID=gene-STY7866_RS07585;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=pseudogene;locus_tag=STY7866_RS07585;pseudo=true
NZ_CAAR01000188.1	Protein Homology	CDS	5475	6247	.	+	0	ID=cds-STY7866_RS07585;Parent=gene-STY7866_RS07585;Note=frameshifted;gbkey=CDS;gene=rfbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456641.1;locus_tag=STY7866_RS07585;product=glucose-1-phosphate cytidylyltransferase;pseudo=true;transl_table=11
NZ_CAAR01000188.1	RefSeq	gene	6252	7331	.	+	.	ID=gene-STY7866_RS07590;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=STY7866_RS07590
NZ_CAAR01000188.1	Protein Homology	CDS	6252	7331	.	+	0	ID=cds-WP_000565909.1;Parent=gene-STY7866_RS07590;Dbxref=Genbank:WP_000565909.1;Name=WP_000565909.1;gbkey=CDS;gene=rfbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456640.1;locus_tag=STY7866_RS07590;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_000565909.1;transl_table=11
NZ_CAAR01000188.1	RefSeq	gene	7358	8671	.	+	.	ID=gene-STY7866_RS07595;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=STY7866_RS07595
NZ_CAAR01000188.1	Protein Homology	CDS	7358	8671	.	+	0	ID=cds-WP_000126347.1;Parent=gene-STY7866_RS07595;Dbxref=Genbank:WP_000126347.1;Name=WP_000126347.1;gbkey=CDS;gene=rfbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456639.1;locus_tag=STY7866_RS07595;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=WP_000126347.1;transl_table=11
NZ_CAAR01000188.1	RefSeq	gene	8705	9544	.	+	.	ID=gene-STY7866_RS07600;Name=STY7866_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07600
NZ_CAAR01000188.1	Protein Homology	CDS	8705	9544	.	+	0	ID=cds-WP_000697757.1;Parent=gene-STY7866_RS07600;Dbxref=Genbank:WP_000697757.1;Name=WP_000697757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456638.1;locus_tag=STY7866_RS07600;product=CDP-paratose synthase;protein_id=WP_000697757.1;transl_table=11
NZ_CAAR01000188.1	RefSeq	gene	9541	10557	.	+	.	ID=gene-STY7866_RS07605;Name=STY7866_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07605
NZ_CAAR01000188.1	Protein Homology	CDS	9541	10557	.	+	0	ID=cds-WP_000770936.1;Parent=gene-STY7866_RS07605;Dbxref=Genbank:WP_000770936.1;Name=WP_000770936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456637.1;locus_tag=STY7866_RS07605;product=CDP-paratose 2-epimerase;protein_id=WP_000770936.1;transl_table=11
NZ_CAAR01000188.1	RefSeq	gene	10628	11926	.	+	.	ID=gene-STY7866_RS07610;Name=STY7866_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07610
NZ_CAAR01000188.1	Protein Homology	CDS	10628	11926	.	+	0	ID=cds-WP_001228890.1;Parent=gene-STY7866_RS07610;Dbxref=Genbank:WP_001228890.1;Name=WP_001228890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456636.1;locus_tag=STY7866_RS07610;product=MATE family efflux transporter;protein_id=WP_001228890.1;transl_table=11
NZ_CAAR01000188.1	RefSeq	gene	11928	12929	.	+	.	ID=gene-STY7866_RS07615;Name=STY7866_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07615
NZ_CAAR01000188.1	Protein Homology	CDS	11928	12929	.	+	0	ID=cds-WP_010989202.1;Parent=gene-STY7866_RS07615;Dbxref=Genbank:WP_010989202.1;Name=WP_010989202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456635.1;locus_tag=STY7866_RS07615;product=glycosyltransferase family 2 protein;protein_id=WP_010989202.1;transl_table=11
NZ_CAAR01000188.1	RefSeq	pseudogene	13504	14565	.	+	.	ID=gene-STY7866_RS07620;Name=STY7866_RS07620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07620;pseudo=true
NZ_CAAR01000188.1	Protein Homology	CDS	13504	14565	.	+	0	ID=cds-STY7866_RS07620;Parent=gene-STY7866_RS07620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456634.1;locus_tag=STY7866_RS07620;product=glycosyltransferase family 4 protein;pseudo=true;transl_table=11
NZ_CAAR01000188.1	RefSeq	gene	14566	15510	.	+	.	ID=gene-STY7866_RS07625;Name=rfbN;gbkey=Gene;gene=rfbN;gene_biotype=protein_coding;locus_tag=STY7866_RS07625
NZ_CAAR01000188.1	Protein Homology	CDS	14566	15510	.	+	0	ID=cds-WP_000705149.1;Parent=gene-STY7866_RS07625;Dbxref=Genbank:WP_000705149.1;Name=WP_000705149.1;gbkey=CDS;gene=rfbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456633.1;locus_tag=STY7866_RS07625;product=O antigen biosynthesis rhamnosyltransferase RfbN;protein_id=WP_000705149.1;transl_table=11
NZ_CAAR01000188.1	RefSeq	gene	15511	16950	.	+	.	ID=gene-STY7866_RS07630;Name=STY7866_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07630
NZ_CAAR01000188.1	Protein Homology	CDS	15511	16950	.	+	0	ID=cds-WP_000009019.1;Parent=gene-STY7866_RS07630;Dbxref=Genbank:WP_000009019.1;Name=WP_000009019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456632.1;locus_tag=STY7866_RS07630;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_000009019.1;transl_table=11
NZ_CAAR01000188.1	RefSeq	gene	16937	18370	.	+	.	ID=gene-STY7866_RS07635;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;locus_tag=STY7866_RS07635
NZ_CAAR01000188.1	Protein Homology	CDS	16937	18370	.	+	0	ID=cds-WP_001103638.1;Parent=gene-STY7866_RS07635;Dbxref=Genbank:WP_001103638.1;Name=WP_001103638.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456631.1;locus_tag=STY7866_RS07635;product=phosphomannomutase CpsG;protein_id=WP_001103638.1;transl_table=11
NZ_CAAR01000188.1	RefSeq	pseudogene	18442	18886	.	+	.	ID=gene-STY7866_RS27050;Name=STY7866_RS27050;end_range=18886,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27050;partial=true;pseudo=true
NZ_CAAR01000188.1	Protein Homology	CDS	18442	18886	.	+	0	ID=cds-STY7866_RS27050;Parent=gene-STY7866_RS27050;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=18886,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456630.1;locus_tag=STY7866_RS27050;partial=true;product=UDP-phosphate galactose phosphotransferase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000187.1 1 115
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000187.1	RefSeq	region	1	115	.	+	.	ID=NZ_CAAR01000187.1:1..115;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000186.1 1 4901
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000186.1	RefSeq	region	1	4901	.	+	.	ID=NZ_CAAR01000186.1:1..4901;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000186.1	RefSeq	gene	293	649	.	+	.	ID=gene-STY7866_RS07530;Name=STY7866_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07530
NZ_CAAR01000186.1	Protein Homology	CDS	293	649	.	+	0	ID=cds-WP_001120250.1;Parent=gene-STY7866_RS07530;Dbxref=Genbank:WP_001120250.1;Name=WP_001120250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458314.1;locus_tag=STY7866_RS07530;product=lysozyme;protein_id=WP_001120250.1;transl_table=11
NZ_CAAR01000186.1	RefSeq	gene	655	1257	.	-	.	ID=gene-STY7866_RS07535;Name=STY7866_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07535
NZ_CAAR01000186.1	Protein Homology	CDS	655	1257	.	-	0	ID=cds-WP_001196086.1;Parent=gene-STY7866_RS07535;Dbxref=Genbank:WP_001196086.1;Name=WP_001196086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458313.1;locus_tag=STY7866_RS07535;product=response regulator transcription factor;protein_id=WP_001196086.1;transl_table=11
NZ_CAAR01000186.1	RefSeq	gene	1885	2787	.	+	.	ID=gene-STY7866_RS07540;Name=STY7866_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07540
NZ_CAAR01000186.1	Protein Homology	CDS	1885	2787	.	+	0	ID=cds-WP_000968873.1;Parent=gene-STY7866_RS07540;Dbxref=Genbank:WP_000968873.1;Name=WP_000968873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458312.1;locus_tag=STY7866_RS07540;product=LysR family transcriptional regulator;protein_id=WP_000968873.1;transl_table=11
NZ_CAAR01000186.1	RefSeq	gene	2860	3888	.	+	.	ID=gene-STY7866_RS07545;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=STY7866_RS07545
NZ_CAAR01000186.1	Protein Homology	CDS	2860	3888	.	+	0	ID=cds-WP_000191231.1;Parent=gene-STY7866_RS07545;Dbxref=Genbank:WP_000191231.1;Name=WP_000191231.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458311.1;locus_tag=STY7866_RS07545;product=inner membrane protein YhjD;protein_id=WP_000191231.1;transl_table=11
NZ_CAAR01000186.1	RefSeq	gene	4239	4901	.	+	.	ID=gene-STY7866_RS07550;Name=STY7866_RS07550;end_range=4901,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07550;partial=true
NZ_CAAR01000186.1	Protein Homology	CDS	4239	4901	.	+	0	ID=cds-WP_001148984.1;Parent=gene-STY7866_RS07550;Dbxref=Genbank:WP_001148984.1;Name=WP_001148984.1;end_range=4901,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458310.1;locus_tag=STY7866_RS07550;partial=true;product=MFS transporter;protein_id=WP_001148984.1;transl_table=11
##sequence-region NZ_CAAR01000185.1 1 19315
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000185.1	RefSeq	region	1	19315	.	+	.	ID=NZ_CAAR01000185.1:1..19315;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000185.1	RefSeq	pseudogene	1	570	.	+	.	ID=gene-STY7866_RS07435;Name=STY7866_RS07435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07435;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000185.1	Protein Homology	CDS	1	570	.	+	0	ID=cds-STY7866_RS07435;Parent=gene-STY7866_RS07435;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458263.1;locus_tag=STY7866_RS07435;partial=true;product=alpha-amylase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000185.1	RefSeq	gene	744	1994	.	+	.	ID=gene-STY7866_RS07440;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=STY7866_RS07440
NZ_CAAR01000185.1	Protein Homology	CDS	744	1994	.	+	0	ID=cds-WP_000144384.1;Parent=gene-STY7866_RS07440;Dbxref=Genbank:WP_000144384.1;Name=WP_000144384.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458262.1;locus_tag=STY7866_RS07440;product=valine--pyruvate transaminase;protein_id=WP_000144384.1;transl_table=11
NZ_CAAR01000185.1	RefSeq	gene	2031	2504	.	-	.	ID=gene-STY7866_RS07445;Name=STY7866_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07445
NZ_CAAR01000185.1	Protein Homology	CDS	2031	2504	.	-	0	ID=cds-WP_001078818.1;Parent=gene-STY7866_RS07445;Dbxref=Genbank:WP_001078818.1;Name=WP_001078818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458261.1;locus_tag=STY7866_RS07445;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001078818.1;transl_table=11
NZ_CAAR01000185.1	RefSeq	gene	2621	3421	.	-	.	ID=gene-STY7866_RS07450;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=STY7866_RS07450
NZ_CAAR01000185.1	Protein Homology	CDS	2621	3421	.	-	0	ID=cds-WP_000081338.1;Parent=gene-STY7866_RS07450;Dbxref=Genbank:WP_000081338.1;Name=WP_000081338.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458260.1;locus_tag=STY7866_RS07450;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000081338.1;transl_table=11
NZ_CAAR01000185.1	RefSeq	gene	3651	4649	.	+	.	ID=gene-STY7866_RS07455;Name=STY7866_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07455
NZ_CAAR01000185.1	Protein Homology	CDS	3651	4649	.	+	0	ID=cds-WP_000869006.1;Parent=gene-STY7866_RS07455;Dbxref=Genbank:WP_000869006.1;Name=WP_000869006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458259.1;locus_tag=STY7866_RS07455;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869006.1;transl_table=11
NZ_CAAR01000185.1	RefSeq	gene	4661	5125	.	+	.	ID=gene-STY7866_RS07460;Name=STY7866_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07460
NZ_CAAR01000185.1	Protein Homology	CDS	4661	5125	.	+	0	ID=cds-WP_000576062.1;Parent=gene-STY7866_RS07460;Dbxref=Genbank:WP_000576062.1;Name=WP_000576062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458258.1;locus_tag=STY7866_RS07460;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576062.1;transl_table=11
NZ_CAAR01000185.1	RefSeq	gene	5149	6081	.	+	.	ID=gene-STY7866_RS07465;Name=STY7866_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07465
NZ_CAAR01000185.1	Protein Homology	CDS	5149	6081	.	+	0	ID=cds-WP_000794971.1;Parent=gene-STY7866_RS07465;Dbxref=Genbank:WP_000794971.1;Name=WP_000794971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458257.1;locus_tag=STY7866_RS07465;product=DUF4862 family protein;protein_id=WP_000794971.1;transl_table=11
NZ_CAAR01000185.1	RefSeq	gene	6220	6693	.	+	.	ID=gene-STY7866_RS07470;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=STY7866_RS07470
NZ_CAAR01000185.1	Protein Homology	CDS	6220	6693	.	+	0	ID=cds-WP_000832313.1;Parent=gene-STY7866_RS07470;Dbxref=Genbank:WP_000832313.1;Name=WP_000832313.1;gbkey=CDS;gene=yiaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458256.1;locus_tag=STY7866_RS07470;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000832313.1;transl_table=11
NZ_CAAR01000185.1	RefSeq	gene	6696	7973	.	+	.	ID=gene-STY7866_RS07475;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=STY7866_RS07475
NZ_CAAR01000185.1	Protein Homology	CDS	6696	7973	.	+	0	ID=cds-WP_000301825.1;Parent=gene-STY7866_RS07475;Dbxref=Genbank:WP_000301825.1;Name=WP_000301825.1;gbkey=CDS;gene=yiaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458255.1;locus_tag=STY7866_RS07475;product=2%2C3-diketo-L-gulonate transporter large permease YiaN;protein_id=WP_000301825.1;transl_table=11
NZ_CAAR01000185.1	RefSeq	gene	7985	8971	.	+	.	ID=gene-STY7866_RS07480;Name=STY7866_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07480
NZ_CAAR01000185.1	Protein Homology	CDS	7985	8971	.	+	0	ID=cds-WP_000766344.1;Parent=gene-STY7866_RS07480;Dbxref=Genbank:WP_000766344.1;Name=WP_000766344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=STY7866_RS07480;product=TRAP transporter substrate-binding protein;protein_id=WP_000766344.1;transl_table=11
NZ_CAAR01000185.1	RefSeq	gene	8975	10471	.	+	.	ID=gene-STY7866_RS07485;Name=STY7866_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07485
NZ_CAAR01000185.1	Protein Homology	CDS	8975	10471	.	+	0	ID=cds-WP_000074072.1;Parent=gene-STY7866_RS07485;Dbxref=Genbank:WP_000074072.1;Name=WP_000074072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458252.1;locus_tag=STY7866_RS07485;product=carbohydrate kinase;protein_id=WP_000074072.1;transl_table=11
NZ_CAAR01000185.1	RefSeq	pseudogene	10468	11126	.	+	.	ID=gene-STY7866_RS07490;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=pseudogene;locus_tag=STY7866_RS07490;pseudo=true
NZ_CAAR01000185.1	Protein Homology	CDS	10468	11126	.	+	0	ID=cds-STY7866_RS07490;Parent=gene-STY7866_RS07490;Note=frameshifted;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458251.1;locus_tag=STY7866_RS07490;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;pseudo=true;transl_table=11
NZ_CAAR01000185.1	RefSeq	gene	11119	11979	.	+	.	ID=gene-STY7866_RS07495;Name=STY7866_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07495
NZ_CAAR01000185.1	Protein Homology	CDS	11119	11979	.	+	0	ID=cds-WP_001244034.1;Parent=gene-STY7866_RS07495;Dbxref=Genbank:WP_001244034.1;Name=WP_001244034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458250.1;locus_tag=STY7866_RS07495;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_001244034.1;transl_table=11
NZ_CAAR01000185.1	RefSeq	gene	11973	12668	.	+	.	ID=gene-STY7866_RS07500;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=STY7866_RS07500
NZ_CAAR01000185.1	Protein Homology	CDS	11973	12668	.	+	0	ID=cds-WP_000893174.1;Parent=gene-STY7866_RS07500;Dbxref=Genbank:WP_000893174.1;Name=WP_000893174.1;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458249.1;locus_tag=STY7866_RS07500;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000893174.1;transl_table=11
NZ_CAAR01000185.1	RefSeq	gene	12829	13641	.	-	.	ID=gene-STY7866_RS07505;Name=STY7866_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07505
NZ_CAAR01000185.1	Protein Homology	CDS	12829	13641	.	-	0	ID=cds-WP_000891802.1;Parent=gene-STY7866_RS07505;Dbxref=Genbank:WP_000891802.1;Name=WP_000891802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458248.1;locus_tag=STY7866_RS07505;product=helix-turn-helix transcriptional regulator;protein_id=WP_000891802.1;transl_table=11
NZ_CAAR01000185.1	RefSeq	gene	13905	15860	.	+	.	ID=gene-STY7866_RS07510;Name=STY7866_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07510
NZ_CAAR01000185.1	Protein Homology	CDS	13905	15860	.	+	0	ID=cds-WP_001101526.1;Parent=gene-STY7866_RS07510;Dbxref=Genbank:WP_001101526.1;Name=WP_001101526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458247.1;locus_tag=STY7866_RS07510;product=glycoside hydrolase family 127 protein;protein_id=WP_001101526.1;transl_table=11
NZ_CAAR01000185.1	RefSeq	gene	15978	17516	.	-	.	ID=gene-STY7866_RS07515;Name=STY7866_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07515
NZ_CAAR01000185.1	Protein Homology	CDS	15978	17516	.	-	0	ID=cds-WP_000183998.1;Parent=gene-STY7866_RS07515;Dbxref=Genbank:WP_000183998.1;Name=WP_000183998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551836.1;locus_tag=STY7866_RS07515;product=aldehyde dehydrogenase;protein_id=WP_000183998.1;transl_table=11
NZ_CAAR01000185.1	RefSeq	gene	17685	18566	.	+	.	ID=gene-STY7866_RS07520;Name=STY7866_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07520
NZ_CAAR01000185.1	Protein Homology	CDS	17685	18566	.	+	0	ID=cds-WP_001188270.1;Parent=gene-STY7866_RS07520;Dbxref=Genbank:WP_001188270.1;Name=WP_001188270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458245.1;locus_tag=STY7866_RS07520;product=ROK family protein;protein_id=WP_001188270.1;transl_table=11
NZ_CAAR01000185.1	RefSeq	pseudogene	18851	19315	.	-	.	ID=gene-STY7866_RS07525;Name=STY7866_RS07525;end_range=19315,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07525;partial=true;pseudo=true
NZ_CAAR01000185.1	Protein Homology	CDS	18851	19315	.	-	0	ID=cds-STY7866_RS07525;Parent=gene-STY7866_RS07525;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=19315,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458244.1;locus_tag=STY7866_RS07525;partial=true;product=selenocysteinyl-tRNA-specific translation elongation factor SelB;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000184.1 1 7094
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000184.1	RefSeq	region	1	7094	.	+	.	ID=NZ_CAAR01000184.1:1..7094;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000184.1	RefSeq	gene	1	623	.	-	.	ID=gene-STY7866_RS07400;Name=STY7866_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07400;partial=true;start_range=.,1
NZ_CAAR01000184.1	Protein Homology	CDS	1	623	.	-	0	ID=cds-WP_001764011.1;Parent=gene-STY7866_RS07400;Dbxref=Genbank:WP_001764011.1;Name=WP_001764011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458026.1;locus_tag=STY7866_RS07400;partial=true;product=DeoR/GlpR transcriptional regulator;protein_id=WP_001764011.1;start_range=.,1;transl_table=11
NZ_CAAR01000184.1	RefSeq	gene	657	1553	.	-	.	ID=gene-STY7866_RS07405;Name=STY7866_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07405
NZ_CAAR01000184.1	Protein Homology	CDS	657	1553	.	-	0	ID=cds-WP_001520529.1;Parent=gene-STY7866_RS07405;Dbxref=Genbank:WP_001520529.1;Name=WP_001520529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458027.1;locus_tag=STY7866_RS07405;product=sugar kinase;protein_id=WP_001520529.1;transl_table=11
NZ_CAAR01000184.1	RefSeq	gene	1718	2614	.	+	.	ID=gene-STY7866_RS07410;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=STY7866_RS07410
NZ_CAAR01000184.1	Protein Homology	CDS	1718	2614	.	+	0	ID=cds-WP_000268240.1;Parent=gene-STY7866_RS07410;Dbxref=Genbank:WP_000268240.1;Name=WP_000268240.1;gbkey=CDS;gene=yihU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458028.1;locus_tag=STY7866_RS07410;product=sulfolactaldehyde 3-reductase;protein_id=WP_000268240.1;transl_table=11
NZ_CAAR01000184.1	RefSeq	gene	2637	3515	.	+	.	ID=gene-STY7866_RS07415;Name=STY7866_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07415
NZ_CAAR01000184.1	Protein Homology	CDS	2637	3515	.	+	0	ID=cds-WP_001067413.1;Parent=gene-STY7866_RS07415;Dbxref=Genbank:WP_001067413.1;Name=WP_001067413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458029.1;locus_tag=STY7866_RS07415;product=sulfofructosephosphate aldolase;protein_id=WP_001067413.1;transl_table=11
NZ_CAAR01000184.1	RefSeq	gene	3531	4667	.	+	.	ID=gene-STY7866_RS07420;Name=STY7866_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07420
NZ_CAAR01000184.1	Protein Homology	CDS	3531	4667	.	+	0	ID=cds-WP_000870931.1;Parent=gene-STY7866_RS07420;Dbxref=Genbank:WP_000870931.1;Name=WP_000870931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015606244.1;locus_tag=STY7866_RS07420;product=sulfoquinovose isomerase;protein_id=WP_000870931.1;transl_table=11
NZ_CAAR01000184.1	RefSeq	pseudogene	4776	5632	.	+	.	ID=gene-STY7866_RS07425;Name=STY7866_RS07425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07425;pseudo=true
NZ_CAAR01000184.1	Protein Homology	CDS	4776	5632	.	+	0	ID=cds-STY7866_RS07425;Parent=gene-STY7866_RS07425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462900.3;locus_tag=STY7866_RS07425;product=aldose-1-epimerase;pseudo=true;transl_table=11
NZ_CAAR01000184.1	RefSeq	gene	5676	7094	.	+	.	ID=gene-STY7866_RS07430;Name=STY7866_RS07430;end_range=7094,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07430;partial=true
NZ_CAAR01000184.1	Protein Homology	CDS	5676	7094	.	+	0	ID=cds-WP_001087027.1;Parent=gene-STY7866_RS07430;Dbxref=Genbank:WP_001087027.1;Name=WP_001087027.1;end_range=7094,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458031.1;locus_tag=STY7866_RS07430;partial=true;product=alpha-glucosidase;protein_id=WP_001087027.1;transl_table=11
##sequence-region NZ_CAAR01000183.1 1 8066
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000183.1	RefSeq	region	1	8066	.	+	.	ID=NZ_CAAR01000183.1:1..8066;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000183.1	RefSeq	gene	1	499	.	-	.	ID=gene-STY7866_RS07350;Name=STY7866_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07350;partial=true;start_range=.,1
NZ_CAAR01000183.1	Protein Homology	CDS	1	499	.	-	0	ID=cds-WP_000444504.1;Parent=gene-STY7866_RS07350;Dbxref=Genbank:WP_000444504.1;Name=WP_000444504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=STY7866_RS07350;partial=true;product=hypothetical protein;protein_id=WP_000444504.1;start_range=.,1;transl_table=11
NZ_CAAR01000183.1	RefSeq	gene	671	1336	.	+	.	ID=gene-STY7866_RS07355;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=STY7866_RS07355
NZ_CAAR01000183.1	Protein Homology	CDS	671	1336	.	+	0	ID=cds-WP_001249410.1;Parent=gene-STY7866_RS07355;Dbxref=Genbank:WP_001249410.1;Name=WP_001249410.1;gbkey=CDS;gene=rluE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455729.1;locus_tag=STY7866_RS07355;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001249410.1;transl_table=11
NZ_CAAR01000183.1	RefSeq	gene	1333	1662	.	+	.	ID=gene-STY7866_RS07360;Name=STY7866_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07360
NZ_CAAR01000183.1	Protein Homology	CDS	1333	1662	.	+	0	ID=cds-WP_000825956.1;Parent=gene-STY7866_RS07360;Dbxref=Genbank:WP_000825956.1;Name=WP_000825956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455728.1;locus_tag=STY7866_RS07360;product=DUF1311 domain-containing protein;protein_id=WP_000825956.1;transl_table=11
NZ_CAAR01000183.1	RefSeq	gene	1674	2135	.	+	.	ID=gene-STY7866_RS07365;Name=STY7866_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07365
NZ_CAAR01000183.1	Protein Homology	CDS	1674	2135	.	+	0	ID=cds-WP_000476064.1;Parent=gene-STY7866_RS07365;Dbxref=Genbank:WP_000476064.1;Name=WP_000476064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455727.1;locus_tag=STY7866_RS07365;product=NUDIX hydrolase;protein_id=WP_000476064.1;transl_table=11
NZ_CAAR01000183.1	RefSeq	gene	2172	3296	.	+	.	ID=gene-STY7866_RS07370;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=STY7866_RS07370
NZ_CAAR01000183.1	Protein Homology	CDS	2172	3296	.	+	0	ID=cds-WP_000091971.1;Parent=gene-STY7866_RS07370;Dbxref=Genbank:WP_000091971.1;Name=WP_000091971.1;gbkey=CDS;gene=mnmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455726.1;locus_tag=STY7866_RS07370;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_000091971.1;transl_table=11
NZ_CAAR01000183.1	RefSeq	gene	3383	4024	.	+	.	ID=gene-STY7866_RS07375;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=STY7866_RS07375
NZ_CAAR01000183.1	Protein Homology	CDS	3383	4024	.	+	0	ID=cds-WP_024131182.1;Parent=gene-STY7866_RS07375;Dbxref=Genbank:WP_024131182.1;Name=WP_024131182.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120991.1;locus_tag=STY7866_RS07375;product=high frequency lysogenization protein HflD;protein_id=WP_024131182.1;transl_table=11
NZ_CAAR01000183.1	RefSeq	gene	4028	5398	.	+	.	ID=gene-STY7866_RS07380;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=STY7866_RS07380
NZ_CAAR01000183.1	Protein Homology	CDS	4028	5398	.	+	0	ID=cds-WP_000423756.1;Parent=gene-STY7866_RS07380;Dbxref=Genbank:WP_000423756.1;Name=WP_000423756.1;gbkey=CDS;gene=purB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819529.1;locus_tag=STY7866_RS07380;product=adenylosuccinate lyase;protein_id=WP_000423756.1;transl_table=11
NZ_CAAR01000183.1	RefSeq	gene	5522	6196	.	+	.	ID=gene-STY7866_RS07385;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=STY7866_RS07385
NZ_CAAR01000183.1	Protein Homology	CDS	5522	6196	.	+	0	ID=cds-WP_000986523.1;Parent=gene-STY7866_RS07385;Dbxref=Genbank:WP_000986523.1;Name=WP_000986523.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455723.1;locus_tag=STY7866_RS07385;product=two-component system response regulator PhoP;protein_id=WP_000986523.1;transl_table=11
NZ_CAAR01000183.1	RefSeq	gene	6196	7659	.	+	.	ID=gene-STY7866_RS07390;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=STY7866_RS07390
NZ_CAAR01000183.1	Protein Homology	CDS	6196	7659	.	+	0	ID=cds-WP_001031689.1;Parent=gene-STY7866_RS07390;Dbxref=Genbank:WP_001031689.1;Name=WP_001031689.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455722.1;locus_tag=STY7866_RS07390;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_001031689.1;transl_table=11
NZ_CAAR01000183.1	RefSeq	gene	7740	8066	.	+	.	ID=gene-STY7866_RS07395;Name=STY7866_RS07395;end_range=8066,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07395;partial=true
NZ_CAAR01000183.1	Protein Homology	CDS	7740	8066	.	+	0	ID=cds-WP_000456521.1;Parent=gene-STY7866_RS07395;Dbxref=Genbank:WP_000456521.1;Name=WP_000456521.1;end_range=8066,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455721.1;locus_tag=STY7866_RS07395;partial=true;product=hypothetical protein;protein_id=WP_000456521.1;transl_table=11
##sequence-region NZ_CAAR01000182.1 1 2013
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000182.1	RefSeq	region	1	2013	.	+	.	ID=NZ_CAAR01000182.1:1..2013;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000182.1	RefSeq	gene	1	1078	.	+	.	ID=gene-STY7866_RS07340;Name=STY7866_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07340;partial=true;start_range=.,1
NZ_CAAR01000182.1	Protein Homology	CDS	1	1078	.	+	1	ID=cds-WP_000296463.1;Parent=gene-STY7866_RS07340;Dbxref=Genbank:WP_000296463.1;Name=WP_000296463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=STY7866_RS07340;partial=true;product=hypothetical protein;protein_id=WP_000296463.1;start_range=.,1;transl_table=11
NZ_CAAR01000182.1	RefSeq	gene	1091	2013	.	-	.	ID=gene-STY7866_RS07345;Name=treF;end_range=2013,.;gbkey=Gene;gene=treF;gene_biotype=protein_coding;locus_tag=STY7866_RS07345;partial=true
NZ_CAAR01000182.1	Protein Homology	CDS	1091	2013	.	-	2	ID=cds-WP_000308907.1;Parent=gene-STY7866_RS07345;Dbxref=Genbank:WP_000308907.1;Name=WP_000308907.1;end_range=2013,.;gbkey=CDS;gene=treF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458316.1;locus_tag=STY7866_RS07345;partial=true;product=alpha%2Calpha-trehalase TreF;protein_id=WP_000308907.1;transl_table=11
##sequence-region NZ_CAAR01000181.1 1 7752
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000181.1	RefSeq	region	1	7752	.	+	.	ID=NZ_CAAR01000181.1:1..7752;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000181.1	RefSeq	gene	1	200	.	-	.	ID=gene-STY7866_RS27030;Name=STY7866_RS27030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27030;partial=true;start_range=.,1
NZ_CAAR01000181.1	Protein Homology	CDS	1	200	.	-	0	ID=cds-WP_151259997.1;Parent=gene-STY7866_RS27030;Dbxref=Genbank:WP_151259997.1;Name=WP_151259997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000927728.1;locus_tag=STY7866_RS27030;partial=true;product=hypothetical protein;protein_id=WP_151259997.1;start_range=.,1;transl_table=11
NZ_CAAR01000181.1	RefSeq	gene	207	1397	.	-	.	ID=gene-STY7866_RS27035;Name=STY7866_RS27035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27035
NZ_CAAR01000181.1	Protein Homology	CDS	207	1397	.	-	0	ID=cds-WP_001255705.1;Parent=gene-STY7866_RS27035;Dbxref=Genbank:WP_001255705.1;Name=WP_001255705.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05688.9;locus_tag=STY7866_RS27035;product=hypothetical protein;protein_id=WP_001255705.1;transl_table=11
NZ_CAAR01000181.1	RefSeq	gene	1485	4643	.	-	.	ID=gene-STY7866_RS27040;Name=STY7866_RS27040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27040
NZ_CAAR01000181.1	Protein Homology	CDS	1485	4643	.	-	0	ID=cds-WP_149134877.1;Parent=gene-STY7866_RS27040;Dbxref=Genbank:WP_149134877.1;Name=WP_149134877.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05689.9;locus_tag=STY7866_RS27040;product=hypothetical protein;protein_id=WP_149134877.1;transl_table=11
NZ_CAAR01000181.1	RefSeq	gene	4640	5887	.	-	.	ID=gene-STY7866_RS27045;Name=STY7866_RS27045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27045
NZ_CAAR01000181.1	Protein Homology	CDS	4640	5887	.	-	0	ID=cds-WP_001688086.1;Parent=gene-STY7866_RS27045;Dbxref=Genbank:WP_001688086.1;Name=WP_001688086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001638703.1;locus_tag=STY7866_RS27045;product=hypothetical protein;protein_id=WP_001688086.1;transl_table=11
NZ_CAAR01000181.1	RefSeq	pseudogene	5999	7752	.	-	.	ID=gene-STY7866_RS07335;Name=STY7866_RS07335;end_range=7752,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07335;partial=true;pseudo=true
NZ_CAAR01000181.1	Protein Homology	CDS	5999	7752	.	-	2	ID=cds-STY7866_RS07335;Parent=gene-STY7866_RS07335;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7752,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457048.1;locus_tag=STY7866_RS07335;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000180.1 1 22810
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000180.1	RefSeq	region	1	22810	.	+	.	ID=NZ_CAAR01000180.1:1..22810;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000180.1	RefSeq	gene	1	1265	.	-	.	ID=gene-STY7866_RS07195;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=STY7866_RS07195;partial=true;start_range=.,1
NZ_CAAR01000180.1	Protein Homology	CDS	1	1265	.	-	0	ID=cds-WP_000786292.1;Parent=gene-STY7866_RS07195;Dbxref=Genbank:WP_000786292.1;Name=WP_000786292.1;gbkey=CDS;gene=pheP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455152.1;locus_tag=STY7866_RS07195;partial=true;product=phenylalanine transporter;protein_id=WP_000786292.1;start_range=.,1;transl_table=11
NZ_CAAR01000180.1	RefSeq	pseudogene	1591	2766	.	+	.	ID=gene-STY7866_RS07200;Name=STY7866_RS07200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07200;pseudo=true
NZ_CAAR01000180.1	Protein Homology	CDS	1591	2766	.	+	0	ID=cds-STY7866_RS07200;Parent=gene-STY7866_RS07200;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=STY7866_RS07200;product=DNA repair protein;pseudo=true;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	2845	3405	.	-	.	ID=gene-STY7866_RS07205;Name=STY7866_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07205
NZ_CAAR01000180.1	Protein Homology	CDS	2845	3405	.	-	0	ID=cds-WP_000362177.1;Parent=gene-STY7866_RS07205;Dbxref=Genbank:WP_000362177.1;Name=WP_000362177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455149.1;locus_tag=STY7866_RS07205;product=YkgB family protein;protein_id=WP_000362177.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	3418	3654	.	-	.	ID=gene-STY7866_RS07210;Name=STY7866_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07210
NZ_CAAR01000180.1	Protein Homology	CDS	3418	3654	.	-	0	ID=cds-WP_000922170.1;Parent=gene-STY7866_RS07210;Dbxref=Genbank:WP_000922170.1;Name=WP_000922170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455148.1;locus_tag=STY7866_RS07210;product=DUF1471 domain-containing protein;protein_id=WP_000922170.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	3811	5136	.	-	.	ID=gene-STY7866_RS07215;Name=STY7866_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07215
NZ_CAAR01000180.1	Protein Homology	CDS	3811	5136	.	-	0	ID=cds-WP_000195937.1;Parent=gene-STY7866_RS07215;Dbxref=Genbank:WP_000195937.1;Name=WP_000195937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455147.1;locus_tag=STY7866_RS07215;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=WP_000195937.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	5352	6206	.	+	.	ID=gene-STY7866_RS07220;Name=STY7866_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07220
NZ_CAAR01000180.1	Protein Homology	CDS	5352	6206	.	+	0	ID=cds-WP_000339629.1;Parent=gene-STY7866_RS07220;Dbxref=Genbank:WP_000339629.1;Name=WP_000339629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455146.1;locus_tag=STY7866_RS07220;product=AraC family transcriptional regulator;protein_id=WP_000339629.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	6257	6469	.	-	.	ID=gene-STY7866_RS27005;Name=STY7866_RS27005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27005
NZ_CAAR01000180.1	GeneMarkS-2+	CDS	6257	6469	.	-	0	ID=cds-WP_095075270.1;Parent=gene-STY7866_RS27005;Dbxref=Genbank:WP_095075270.1;Name=WP_095075270.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=STY7866_RS27005;product=hypothetical protein;protein_id=WP_095075270.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	pseudogene	6373	6568	.	+	.	ID=gene-STY7866_RS07230;Name=STY7866_RS07230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07230;partial=true;pseudo=true;start_range=.,6373
NZ_CAAR01000180.1	Protein Homology	CDS	6373	6568	.	+	0	ID=cds-STY7866_RS07230;Parent=gene-STY7866_RS07230;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459553.1;locus_tag=STY7866_RS07230;partial=true;product=hypothetical protein;pseudo=true;start_range=.,6373;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	6700	7011	.	+	.	ID=gene-STY7866_RS07235;Name=STY7866_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07235
NZ_CAAR01000180.1	Protein Homology	CDS	6700	7011	.	+	0	ID=cds-WP_031624284.1;Parent=gene-STY7866_RS07235;Dbxref=Genbank:WP_031624284.1;Name=WP_031624284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001032257.1;locus_tag=STY7866_RS07235;product=hypothetical protein;protein_id=WP_031624284.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	7414	7776	.	+	.	ID=gene-STY7866_RS07240;Name=STY7866_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07240
NZ_CAAR01000180.1	Protein Homology	CDS	7414	7776	.	+	0	ID=cds-WP_000915523.1;Parent=gene-STY7866_RS07240;Dbxref=Genbank:WP_000915523.1;Name=WP_000915523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455144.1;locus_tag=STY7866_RS07240;product=GtrA family protein;protein_id=WP_000915523.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	7773	8699	.	+	.	ID=gene-STY7866_RS07245;Name=STY7866_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07245
NZ_CAAR01000180.1	Protein Homology	CDS	7773	8699	.	+	0	ID=cds-WP_000703607.1;Parent=gene-STY7866_RS07245;Dbxref=Genbank:WP_000703607.1;Name=WP_000703607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455143.1;locus_tag=STY7866_RS07245;product=glycosyltransferase family 2 protein;protein_id=WP_000703607.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	8680	10332	.	+	.	ID=gene-STY7866_RS07250;Name=STY7866_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07250
NZ_CAAR01000180.1	Protein Homology	CDS	8680	10332	.	+	0	ID=cds-WP_077905070.1;Parent=gene-STY7866_RS07250;Dbxref=Genbank:WP_077905070.1;Name=WP_077905070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459550.1;locus_tag=STY7866_RS07250;product=hypothetical protein;protein_id=WP_077905070.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	pseudogene	10718	11385	.	+	.	ID=gene-STY7866_RS27010;Name=STY7866_RS27010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27010;pseudo=true
NZ_CAAR01000180.1	Protein Homology	CDS	10718	11385	.	+	0	ID=cds-STY7866_RS27010;Parent=gene-STY7866_RS27010;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611920.1;locus_tag=STY7866_RS27010;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_CAAR01000180.1	RefSeq	pseudogene	11357	11479	.	+	.	ID=gene-STY7866_RS27015;Name=STY7866_RS27015;end_range=11479,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS27015;partial=true;pseudo=true;start_range=.,11357
NZ_CAAR01000180.1	Protein Homology	CDS	11357	11479	.	+	0	ID=cds-STY7866_RS27015;Parent=gene-STY7866_RS27015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=11479,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415069.1;locus_tag=STY7866_RS27015;partial=true;product=integrase;pseudo=true;start_range=.,11357;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	11501	11577	.	-	.	ID=gene-STY7866_RS07265;Name=STY7866_RS07265;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS07265
NZ_CAAR01000180.1	tRNAscan-SE	tRNA	11501	11577	.	-	.	ID=rna-STY7866_RS07265;Parent=gene-STY7866_RS07265;anticodon=(pos:complement(11541..11543));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS07265;product=tRNA-Arg
NZ_CAAR01000180.1	tRNAscan-SE	exon	11501	11577	.	-	.	ID=exon-STY7866_RS07265-1;Parent=rna-STY7866_RS07265;anticodon=(pos:complement(11541..11543));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS07265;product=tRNA-Arg
NZ_CAAR01000180.1	RefSeq	gene	11640	11876	.	-	.	ID=gene-STY7866_RS27020;Name=STY7866_RS27020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27020
NZ_CAAR01000180.1	Protein Homology	CDS	11640	11876	.	-	0	ID=cds-WP_014341429.1;Parent=gene-STY7866_RS27020;Dbxref=Genbank:WP_014341429.1;Name=WP_014341429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523413.1;locus_tag=STY7866_RS27020;product=hypothetical protein;protein_id=WP_014341429.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	11832	12428	.	+	.	ID=gene-STY7866_RS07270;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=STY7866_RS07270
NZ_CAAR01000180.1	Protein Homology	CDS	11832	12428	.	+	0	ID=cds-WP_000948632.1;Parent=gene-STY7866_RS07270;Dbxref=Genbank:WP_000948632.1;Name=WP_000948632.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455141.1;locus_tag=STY7866_RS07270;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WP_000948632.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	12590	12901	.	+	.	ID=gene-STY7866_RS07275;Name=STY7866_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07275
NZ_CAAR01000180.1	Protein Homology	CDS	12590	12901	.	+	0	ID=cds-WP_000226497.1;Parent=gene-STY7866_RS07275;Dbxref=Genbank:WP_000226497.1;Name=WP_000226497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455140.1;locus_tag=STY7866_RS07275;product=diguanylate cyclase;protein_id=WP_000226497.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	12920	13642	.	+	.	ID=gene-STY7866_RS07280;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=STY7866_RS07280
NZ_CAAR01000180.1	Protein Homology	CDS	12920	13642	.	+	0	ID=cds-WP_001258098.1;Parent=gene-STY7866_RS07280;Dbxref=Genbank:WP_001258098.1;Name=WP_001258098.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455139.1;locus_tag=STY7866_RS07280;product=fimbria biosynthesis regulator FimY;protein_id=WP_001258098.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	14243	14875	.	+	.	ID=gene-STY7866_RS07285;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=STY7866_RS07285
NZ_CAAR01000180.1	Protein Homology	CDS	14243	14875	.	+	0	ID=cds-WP_000801270.1;Parent=gene-STY7866_RS07285;Dbxref=Genbank:WP_000801270.1;Name=WP_000801270.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455138.1;locus_tag=STY7866_RS07285;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000801270.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	14921	15439	.	-	.	ID=gene-STY7866_RS07290;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=STY7866_RS07290
NZ_CAAR01000180.1	Protein Homology	CDS	14921	15439	.	-	0	ID=cds-WP_000603407.1;Parent=gene-STY7866_RS07290;Dbxref=Genbank:WP_000603407.1;Name=WP_000603407.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455137.1;locus_tag=STY7866_RS07290;product=fimbria assembly protein;protein_id=WP_000603407.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	15449	16456	.	-	.	ID=gene-STY7866_RS07295;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=STY7866_RS07295
NZ_CAAR01000180.1	Protein Homology	CDS	15449	16456	.	-	0	ID=cds-WP_000708646.1;Parent=gene-STY7866_RS07295;Dbxref=Genbank:WP_000708646.1;Name=WP_000708646.1;gbkey=CDS;gene=fimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455136.1;locus_tag=STY7866_RS07295;product=type 1 fimbrin D-mannose specific adhesin FimH;protein_id=WP_000708646.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	16471	19083	.	-	.	ID=gene-STY7866_RS07300;Name=STY7866_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07300
NZ_CAAR01000180.1	Protein Homology	CDS	16471	19083	.	-	0	ID=cds-WP_000754216.1;Parent=gene-STY7866_RS07300;Dbxref=Genbank:WP_000754216.1;Name=WP_000754216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455135.1;locus_tag=STY7866_RS07300;product=fimbrial biogenesis usher protein;protein_id=WP_000754216.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	19114	19806	.	-	.	ID=gene-STY7866_RS07305;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=STY7866_RS07305
NZ_CAAR01000180.1	Protein Homology	CDS	19114	19806	.	-	0	ID=cds-WP_001764009.1;Parent=gene-STY7866_RS07305;Dbxref=Genbank:WP_001764009.1;Name=WP_001764009.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455134.1;locus_tag=STY7866_RS07305;product=type 1 fimbria chaperone FimC;protein_id=WP_001764009.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	19850	20383	.	-	.	ID=gene-STY7866_RS07310;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=STY7866_RS07310
NZ_CAAR01000180.1	Protein Homology	CDS	19850	20383	.	-	0	ID=cds-WP_000619617.1;Parent=gene-STY7866_RS07310;Dbxref=Genbank:WP_000619617.1;Name=WP_000619617.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=STY7866_RS07310;product=type 1 fimbrial protein subunit FimI;protein_id=WP_000619617.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	20458	21012	.	-	.	ID=gene-STY7866_RS07315;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=STY7866_RS07315
NZ_CAAR01000180.1	Protein Homology	CDS	20458	21012	.	-	0	ID=cds-WP_000681037.1;Parent=gene-STY7866_RS07315;Dbxref=Genbank:WP_000681037.1;Name=WP_000681037.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455133.1;locus_tag=STY7866_RS07315;product=type 1 fimbrial protein subunit FimA;protein_id=WP_000681037.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	21002	21196	.	-	.	ID=gene-STY7866_RS27025;Name=STY7866_RS27025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27025
NZ_CAAR01000180.1	Protein Homology	CDS	21002	21196	.	-	0	ID=cds-WP_071531826.1;Parent=gene-STY7866_RS27025;Dbxref=Genbank:WP_071531826.1;Name=WP_071531826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663608.1;locus_tag=STY7866_RS27025;product=hypothetical protein;protein_id=WP_071531826.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	21559	22425	.	+	.	ID=gene-STY7866_RS07320;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=STY7866_RS07320
NZ_CAAR01000180.1	Protein Homology	CDS	21559	22425	.	+	0	ID=cds-WP_000729163.1;Parent=gene-STY7866_RS07320;Dbxref=Genbank:WP_000729163.1;Name=WP_000729163.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818895.1;locus_tag=STY7866_RS07320;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729163.1;transl_table=11
NZ_CAAR01000180.1	RefSeq	gene	22427	22639	.	+	.	ID=gene-STY7866_RS07325;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=STY7866_RS07325
NZ_CAAR01000180.1	Protein Homology	CDS	22427	22639	.	+	0	ID=cds-WP_000190278.1;Parent=gene-STY7866_RS07325;Dbxref=Genbank:WP_000190278.1;Name=WP_000190278.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455131.1;locus_tag=STY7866_RS07325;product=ribosome-associated protein YbcJ;protein_id=WP_000190278.1;transl_table=11
##sequence-region NZ_CAAR01000179.1 1 22139
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000179.1	RefSeq	region	1	22139	.	+	.	ID=NZ_CAAR01000179.1:1..22139;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000179.1	RefSeq	gene	1	775	.	-	.	ID=gene-STY7866_RS07075;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=STY7866_RS07075;partial=true;start_range=.,1
NZ_CAAR01000179.1	Protein Homology	CDS	1	775	.	-	0	ID=cds-WP_024151037.1;Parent=gene-STY7866_RS07075;Dbxref=Genbank:WP_024151037.1;Name=WP_024151037.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457975.1;locus_tag=STY7866_RS07075;partial=true;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_024151037.1;start_range=.,1;transl_table=11
NZ_CAAR01000179.1	RefSeq	pseudogene	804	1806	.	-	.	ID=gene-STY7866_RS26995;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=pseudogene;locus_tag=STY7866_RS26995;pseudo=true
NZ_CAAR01000179.1	Protein Homology	CDS	804	1806	.	-	0	ID=cds-STY7866_RS26995;Parent=gene-STY7866_RS26995;Note=frameshifted;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457976.1;locus_tag=STY7866_RS26995;product=autoinducer 2 ABC transporter permease LsrD;pseudo=true;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	1803	2846	.	-	.	ID=gene-STY7866_RS07085;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=STY7866_RS07085
NZ_CAAR01000179.1	Protein Homology	CDS	1803	2846	.	-	0	ID=cds-WP_000911130.1;Parent=gene-STY7866_RS07085;Dbxref=Genbank:WP_000911130.1;Name=WP_000911130.1;gbkey=CDS;gene=lsrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457977.1;locus_tag=STY7866_RS07085;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_000911130.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	2840	4375	.	-	.	ID=gene-STY7866_RS07090;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=STY7866_RS07090
NZ_CAAR01000179.1	Protein Homology	CDS	2840	4375	.	-	0	ID=cds-WP_001167253.1;Parent=gene-STY7866_RS07090;Dbxref=Genbank:WP_001167253.1;Name=WP_001167253.1;gbkey=CDS;gene=lsrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457978.1;locus_tag=STY7866_RS07090;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_001167253.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	4631	5590	.	+	.	ID=gene-STY7866_RS07095;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=STY7866_RS07095
NZ_CAAR01000179.1	Protein Homology	CDS	4631	5590	.	+	0	ID=cds-WP_001283049.1;Parent=gene-STY7866_RS07095;Dbxref=Genbank:WP_001283049.1;Name=WP_001283049.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457979.1;locus_tag=STY7866_RS07095;product=transcriptional regulator LsrR;protein_id=WP_001283049.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	5677	7269	.	+	.	ID=gene-STY7866_RS07100;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=STY7866_RS07100
NZ_CAAR01000179.1	Protein Homology	CDS	5677	7269	.	+	0	ID=cds-WP_000113081.1;Parent=gene-STY7866_RS07100;Dbxref=Genbank:WP_000113081.1;Name=WP_000113081.1;gbkey=CDS;gene=lsrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457980.1;locus_tag=STY7866_RS07100;product=autoinducer-2 kinase;protein_id=WP_000113081.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	7283	7564	.	+	.	ID=gene-STY7866_RS07105;Name=STY7866_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07105
NZ_CAAR01000179.1	Protein Homology	CDS	7283	7564	.	+	0	ID=cds-WP_001173084.1;Parent=gene-STY7866_RS07105;Dbxref=Genbank:WP_001173084.1;Name=WP_001173084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001173084.1;locus_tag=STY7866_RS07105;product=cupin domain-containing protein;protein_id=WP_001173084.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	7723	7854	.	-	.	ID=gene-STY7866_RS27000;Name=STY7866_RS27000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS27000
NZ_CAAR01000179.1	Protein Homology	CDS	7723	7854	.	-	0	ID=cds-WP_000252182.1;Parent=gene-STY7866_RS27000;Dbxref=Genbank:WP_000252182.1;Name=WP_000252182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462951.1;locus_tag=STY7866_RS27000;product=hypothetical protein;protein_id=WP_000252182.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	7870	8040	.	-	.	ID=gene-STY7866_RS07115;Name=STY7866_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07115
NZ_CAAR01000179.1	Protein Homology	CDS	7870	8040	.	-	0	ID=cds-WP_000061017.1;Parent=gene-STY7866_RS07115;Dbxref=Genbank:WP_000061017.1;Name=WP_000061017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000061017.1;locus_tag=STY7866_RS07115;product=hypothetical protein;protein_id=WP_000061017.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	8138	8860	.	-	.	ID=gene-STY7866_RS07120;Name=STY7866_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07120
NZ_CAAR01000179.1	Protein Homology	CDS	8138	8860	.	-	0	ID=cds-WP_001764005.1;Parent=gene-STY7866_RS07120;Dbxref=Genbank:WP_001764005.1;Name=WP_001764005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457982.1;locus_tag=STY7866_RS07120;product=GntR family transcriptional regulator;protein_id=WP_001764005.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	8923	9963	.	-	.	ID=gene-STY7866_RS07125;Name=STY7866_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07125
NZ_CAAR01000179.1	Protein Homology	CDS	8923	9963	.	-	0	ID=cds-WP_000557877.1;Parent=gene-STY7866_RS07125;Dbxref=Genbank:WP_000557877.1;Name=WP_000557877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457983.1;locus_tag=STY7866_RS07125;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000557877.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	9973	10932	.	-	.	ID=gene-STY7866_RS07130;Name=STY7866_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07130
NZ_CAAR01000179.1	Protein Homology	CDS	9973	10932	.	-	0	ID=cds-WP_000646490.1;Parent=gene-STY7866_RS07130;Dbxref=Genbank:WP_000646490.1;Name=WP_000646490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457984.1;locus_tag=STY7866_RS07130;product=aminoimidazole riboside kinase;protein_id=WP_000646490.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	pseudogene	10943	12232	.	-	.	ID=gene-STY7866_RS07135;Name=STY7866_RS07135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07135;pseudo=true
NZ_CAAR01000179.1	Protein Homology	CDS	10943	12232	.	-	0	ID=cds-STY7866_RS07135;Parent=gene-STY7866_RS07135;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575232.1;locus_tag=STY7866_RS07135;product=MFS transporter;pseudo=true;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	12544	13299	.	-	.	ID=gene-STY7866_RS07140;Name=STY7866_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07140
NZ_CAAR01000179.1	Protein Homology	CDS	12544	13299	.	-	0	ID=cds-WP_000750765.1;Parent=gene-STY7866_RS07140;Dbxref=Genbank:WP_000750765.1;Name=WP_000750765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457987.1;locus_tag=STY7866_RS07140;product=CDP-diacylglycerol diphosphatase;protein_id=WP_000750765.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	13400	14389	.	-	.	ID=gene-STY7866_RS07145;Name=STY7866_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07145
NZ_CAAR01000179.1	Protein Homology	CDS	13400	14389	.	-	0	ID=cds-WP_000758715.1;Parent=gene-STY7866_RS07145;Dbxref=Genbank:WP_000758715.1;Name=WP_000758715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=STY7866_RS07145;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_000758715.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	14593	15555	.	-	.	ID=gene-STY7866_RS07150;Name=STY7866_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07150
NZ_CAAR01000179.1	Protein Homology	CDS	14593	15555	.	-	0	ID=cds-WP_000591793.1;Parent=gene-STY7866_RS07150;Dbxref=Genbank:WP_000591793.1;Name=WP_000591793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457989.1;locus_tag=STY7866_RS07150;product=6-phosphofructokinase;protein_id=WP_000591793.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	15740	16636	.	-	.	ID=gene-STY7866_RS07155;Name=STY7866_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07155
NZ_CAAR01000179.1	Protein Homology	CDS	15740	16636	.	-	0	ID=cds-WP_001077323.1;Parent=gene-STY7866_RS07155;Dbxref=Genbank:WP_001077323.1;Name=WP_001077323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457990.1;locus_tag=STY7866_RS07155;product=CDF family cation-efflux transporter FieF;protein_id=WP_001077323.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	16784	17284	.	-	.	ID=gene-STY7866_RS07160;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=STY7866_RS07160
NZ_CAAR01000179.1	Protein Homology	CDS	16784	17284	.	-	0	ID=cds-WP_001233466.1;Parent=gene-STY7866_RS07160;Dbxref=Genbank:WP_001233466.1;Name=WP_001233466.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457991.1;locus_tag=STY7866_RS07160;product=cell-envelope stress modulator CpxP;protein_id=WP_001233466.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	17435	18133	.	+	.	ID=gene-STY7866_RS07165;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=STY7866_RS07165
NZ_CAAR01000179.1	Protein Homology	CDS	17435	18133	.	+	0	ID=cds-WP_001033727.1;Parent=gene-STY7866_RS07165;Dbxref=Genbank:WP_001033727.1;Name=WP_001033727.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=STY7866_RS07165;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033727.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	18130	19503	.	+	.	ID=gene-STY7866_RS07170;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=STY7866_RS07170
NZ_CAAR01000179.1	Protein Homology	CDS	18130	19503	.	+	0	ID=cds-WP_000580406.1;Parent=gene-STY7866_RS07170;Dbxref=Genbank:WP_000580406.1;Name=WP_000580406.1;gbkey=CDS;gene=cpxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457993.1;locus_tag=STY7866_RS07170;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580406.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	gene	19554	19949	.	-	.	ID=gene-STY7866_RS07175;Name=STY7866_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07175
NZ_CAAR01000179.1	Protein Homology	CDS	19554	19949	.	-	0	ID=cds-WP_000133445.1;Parent=gene-STY7866_RS07175;Dbxref=Genbank:WP_000133445.1;Name=WP_000133445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457994.1;locus_tag=STY7866_RS07175;product=nuclear transport factor 2 family protein;protein_id=WP_000133445.1;transl_table=11
NZ_CAAR01000179.1	RefSeq	pseudogene	19961	20712	.	-	.	ID=gene-STY7866_RS07180;Name=STY7866_RS07180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07180;pseudo=true
NZ_CAAR01000179.1	Protein Homology	CDS	19961	20712	.	-	0	ID=cds-STY7866_RS07180;Parent=gene-STY7866_RS07180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457995.3;locus_tag=STY7866_RS07180;product=6-N-hydroxylaminopurine resistance protein;pseudo=true;transl_table=11
NZ_CAAR01000179.1	RefSeq	pseudogene	20719	21340	.	-	.	ID=gene-STY7866_RS07185;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=pseudogene;locus_tag=STY7866_RS07185;pseudo=true
NZ_CAAR01000179.1	Protein Homology	CDS	20719	21340	.	-	0	ID=cds-STY7866_RS07185;Parent=gene-STY7866_RS07185;Note=frameshifted;gbkey=CDS;gene=sodA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=STY7866_RS07185;product=superoxide dismutase [Mn];pseudo=true;transl_table=11
NZ_CAAR01000179.1	RefSeq	pseudogene	21669	22139	.	+	.	ID=gene-STY7866_RS07190;Name=STY7866_RS07190;end_range=22139,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07190;partial=true;pseudo=true
NZ_CAAR01000179.1	Protein Homology	CDS	21669	22139	.	+	0	ID=cds-STY7866_RS07190;Parent=gene-STY7866_RS07190;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=22139,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=STY7866_RS07190;partial=true;product=TRAP transporter substrate-binding protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000178.1 1 6110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000178.1	RefSeq	region	1	6110	.	+	.	ID=NZ_CAAR01000178.1:1..6110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000178.1	RefSeq	pseudogene	1	1437	.	-	.	ID=gene-STY7866_RS07050;Name=STY7866_RS07050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07050;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000178.1	Protein Homology	CDS	1	1437	.	-	0	ID=cds-STY7866_RS07050;Parent=gene-STY7866_RS07050;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455618.1;locus_tag=STY7866_RS07050;partial=true;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000178.1	RefSeq	gene	1859	3367	.	+	.	ID=gene-STY7866_RS07055;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=STY7866_RS07055
NZ_CAAR01000178.1	Protein Homology	CDS	1859	3367	.	+	0	ID=cds-WP_001018468.1;Parent=gene-STY7866_RS07055;Dbxref=Genbank:WP_001018468.1;Name=WP_001018468.1;gbkey=CDS;gene=putP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455619.1;locus_tag=STY7866_RS07055;product=sodium/proline symporter PutP;protein_id=WP_001018468.1;transl_table=11
NZ_CAAR01000178.1	RefSeq	gene	4194	5048	.	+	.	ID=gene-STY7866_RS07065;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=STY7866_RS07065
NZ_CAAR01000178.1	Protein Homology	CDS	4194	5048	.	+	0	ID=cds-WP_001617488.1;Parent=gene-STY7866_RS07065;Dbxref=Genbank:WP_001617488.1;Name=WP_001617488.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455620.1;locus_tag=STY7866_RS07065;product=phosphate starvation-inducible protein PhoH;protein_id=WP_001617488.1;transl_table=11
NZ_CAAR01000178.1	RefSeq	gene	5154	6035	.	-	.	ID=gene-STY7866_RS07070;Name=STY7866_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07070
NZ_CAAR01000178.1	Protein Homology	CDS	5154	6035	.	-	0	ID=cds-WP_000433673.1;Parent=gene-STY7866_RS07070;Dbxref=Genbank:WP_000433673.1;Name=WP_000433673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455621.1;locus_tag=STY7866_RS07070;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000433673.1;transl_table=11
##sequence-region NZ_CAAR01000177.1 1 18922
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000177.1	RefSeq	region	1	18922	.	+	.	ID=NZ_CAAR01000177.1:1..18922;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000177.1	RefSeq	gene	1	1637	.	-	.	ID=gene-STY7866_RS07005;Name=STY7866_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07005;partial=true;start_range=.,1
NZ_CAAR01000177.1	Protein Homology	CDS	1	1637	.	-	0	ID=cds-WP_000196136.1;Parent=gene-STY7866_RS07005;Dbxref=Genbank:WP_000196136.1;Name=WP_000196136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457160.1;locus_tag=STY7866_RS07005;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_000196136.1;start_range=.,1;transl_table=11
NZ_CAAR01000177.1	RefSeq	gene	1634	3043	.	-	.	ID=gene-STY7866_RS07010;Name=STY7866_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07010
NZ_CAAR01000177.1	Protein Homology	CDS	1634	3043	.	-	0	ID=cds-WP_000533850.1;Parent=gene-STY7866_RS07010;Dbxref=Genbank:WP_000533850.1;Name=WP_000533850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457159.1;locus_tag=STY7866_RS07010;product=TolC family outer membrane protein;protein_id=WP_000533850.1;transl_table=11
NZ_CAAR01000177.1	RefSeq	gene	3107	13975	.	-	.	ID=gene-STY7866_RS07015;Name=STY7866_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07015
NZ_CAAR01000177.1	Protein Homology	CDS	3107	13975	.	-	0	ID=cds-WP_001237655.1;Parent=gene-STY7866_RS07015;Dbxref=Genbank:WP_001237655.1;Name=WP_001237655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457158.1;locus_tag=STY7866_RS07015;product=Ig-like domain repeat protein;protein_id=WP_001237655.1;transl_table=11
NZ_CAAR01000177.1	RefSeq	gene	14595	15077	.	-	.	ID=gene-STY7866_RS07020;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=STY7866_RS07020
NZ_CAAR01000177.1	Protein Homology	CDS	14595	15077	.	-	0	ID=cds-WP_001518569.1;Parent=gene-STY7866_RS07020;Dbxref=Genbank:WP_001518569.1;Name=WP_001518569.1;gbkey=CDS;gene=smpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457157.1;locus_tag=STY7866_RS07020;product=SsrA-binding protein SmpB;protein_id=WP_001518569.1;transl_table=11
NZ_CAAR01000177.1	RefSeq	gene	15227	15703	.	+	.	ID=gene-STY7866_RS07025;Name=STY7866_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07025
NZ_CAAR01000177.1	Protein Homology	CDS	15227	15703	.	+	0	ID=cds-WP_000242603.1;Parent=gene-STY7866_RS07025;Dbxref=Genbank:WP_000242603.1;Name=WP_000242603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457156.1;locus_tag=STY7866_RS07025;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_000242603.1;transl_table=11
NZ_CAAR01000177.1	RefSeq	gene	15693	15983	.	+	.	ID=gene-STY7866_RS07030;Name=STY7866_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS07030
NZ_CAAR01000177.1	Protein Homology	CDS	15693	15983	.	+	0	ID=cds-WP_001112990.1;Parent=gene-STY7866_RS07030;Dbxref=Genbank:WP_001112990.1;Name=WP_001112990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=STY7866_RS07030;product=RnfH family protein;protein_id=WP_001112990.1;transl_table=11
NZ_CAAR01000177.1	RefSeq	gene	16149	16487	.	-	.	ID=gene-STY7866_RS07035;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=STY7866_RS07035
NZ_CAAR01000177.1	Protein Homology	CDS	16149	16487	.	-	0	ID=cds-WP_001203445.1;Parent=gene-STY7866_RS07035;Dbxref=Genbank:WP_001203445.1;Name=WP_001203445.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457154.1;locus_tag=STY7866_RS07035;product=outer membrane protein assembly factor BamE;protein_id=WP_001203445.1;transl_table=11
NZ_CAAR01000177.1	RefSeq	gene	16589	18298	.	-	.	ID=gene-STY7866_RS07040;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=STY7866_RS07040
NZ_CAAR01000177.1	Protein Homology	CDS	16589	18298	.	-	0	ID=cds-WP_000880974.1;Parent=gene-STY7866_RS07040;Dbxref=Genbank:WP_000880974.1;Name=WP_000880974.1;gbkey=CDS;gene=recN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000880974.1;locus_tag=STY7866_RS07040;product=DNA repair protein RecN;protein_id=WP_000880974.1;transl_table=11
NZ_CAAR01000177.1	RefSeq	pseudogene	18384	18922	.	-	.	ID=gene-STY7866_RS07045;Name=ppnK;end_range=18922,.;gbkey=Gene;gene=ppnK;gene_biotype=pseudogene;locus_tag=STY7866_RS07045;partial=true;pseudo=true
NZ_CAAR01000177.1	Protein Homology	CDS	18384	18922	.	-	2	ID=cds-STY7866_RS07045;Parent=gene-STY7866_RS07045;Note=catalyzes the phosphorylation of NAD to NADP%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=18922,.;gbkey=CDS;gene=ppnK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=STY7866_RS07045;partial=true;product=NAD(+) kinase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000176.1 1 1764
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000176.1	RefSeq	region	1	1764	.	+	.	ID=NZ_CAAR01000176.1:1..1764;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000176.1	RefSeq	pseudogene	1	597	.	+	.	ID=gene-STY7866_RS06990;Name=STY7866_RS06990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS06990;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000176.1	Protein Homology	CDS	1	597	.	+	0	ID=cds-STY7866_RS06990;Parent=gene-STY7866_RS06990;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458230.1;locus_tag=STY7866_RS06990;partial=true;product=GntR family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000176.1	RefSeq	gene	665	1138	.	-	.	ID=gene-STY7866_RS06995;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=STY7866_RS06995
NZ_CAAR01000176.1	Protein Homology	CDS	665	1138	.	-	0	ID=cds-WP_000932331.1;Parent=gene-STY7866_RS06995;Dbxref=Genbank:WP_000932331.1;Name=WP_000932331.1;gbkey=CDS;gene=trmL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=STY7866_RS06995;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932331.1;transl_table=11
NZ_CAAR01000176.1	RefSeq	pseudogene	1201	1764	.	-	.	ID=gene-STY7866_RS07000;Name=STY7866_RS07000;end_range=1764,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS07000;partial=true;pseudo=true
NZ_CAAR01000176.1	Protein Homology	CDS	1201	1764	.	-	0	ID=cds-STY7866_RS07000;Parent=gene-STY7866_RS07000;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1764,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458232.1;locus_tag=STY7866_RS07000;partial=true;product=L-lactate dehydrogenase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000175.1 1 3637
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000175.1	RefSeq	region	1	3637	.	+	.	ID=NZ_CAAR01000175.1:1..3637;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000175.1	RefSeq	pseudogene	1	337	.	-	.	ID=gene-STY7866_RS06965;Name=STY7866_RS06965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS06965;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000175.1	Protein Homology	CDS	1	337	.	-	0	ID=cds-STY7866_RS06965;Parent=gene-STY7866_RS06965;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455968.1;locus_tag=STY7866_RS06965;partial=true;product=dipeptidyl carboxypeptidase II;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000175.1	RefSeq	gene	476	1222	.	+	.	ID=gene-STY7866_RS06970;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=STY7866_RS06970
NZ_CAAR01000175.1	Protein Homology	CDS	476	1222	.	+	0	ID=cds-WP_000636564.1;Parent=gene-STY7866_RS06970;Dbxref=Genbank:WP_000636564.1;Name=WP_000636564.1;gbkey=CDS;gene=ydfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455969.1;locus_tag=STY7866_RS06970;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636564.1;transl_table=11
NZ_CAAR01000175.1	RefSeq	gene	1352	2038	.	+	.	ID=gene-STY7866_RS06975;Name=STY7866_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06975
NZ_CAAR01000175.1	Protein Homology	CDS	1352	2038	.	+	0	ID=cds-WP_000215563.1;Parent=gene-STY7866_RS06975;Dbxref=Genbank:WP_000215563.1;Name=WP_000215563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455970.1;locus_tag=STY7866_RS06975;product=GntR family transcriptional regulator;protein_id=WP_000215563.1;transl_table=11
NZ_CAAR01000175.1	RefSeq	gene	2219	2422	.	+	.	ID=gene-STY7866_RS06980;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=STY7866_RS06980
NZ_CAAR01000175.1	Protein Homology	CDS	2219	2422	.	+	0	ID=cds-WP_000989267.1;Parent=gene-STY7866_RS06980;Dbxref=Genbank:WP_000989267.1;Name=WP_000989267.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455971.1;locus_tag=STY7866_RS06980;product=putative selenium delivery protein YdfZ;protein_id=WP_000989267.1;transl_table=11
NZ_CAAR01000175.1	RefSeq	gene	2489	3637	.	-	.	ID=gene-STY7866_RS06985;Name=STY7866_RS06985;end_range=3637,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06985;partial=true
NZ_CAAR01000175.1	Protein Homology	CDS	2489	3637	.	-	0	ID=cds-WP_000308520.1;Parent=gene-STY7866_RS06985;Dbxref=Genbank:WP_000308520.1;Name=WP_000308520.1;end_range=3637,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455972.1;locus_tag=STY7866_RS06985;partial=true;product=mannitol dehydrogenase family protein;protein_id=WP_000308520.1;transl_table=11
##sequence-region NZ_CAAR01000174.1 1 11234
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000174.1	RefSeq	region	1	11234	.	+	.	ID=NZ_CAAR01000174.1:1..11234;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000174.1	RefSeq	gene	79	747	.	-	.	ID=gene-STY7866_RS06905;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=STY7866_RS06905
NZ_CAAR01000174.1	Protein Homology	CDS	79	747	.	-	0	ID=cds-WP_000895396.1;Parent=gene-STY7866_RS06905;Dbxref=Genbank:WP_000895396.1;Name=WP_000895396.1;gbkey=CDS;gene=artM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455415.1;locus_tag=STY7866_RS06905;product=arginine ABC transporter permease ArtM;protein_id=WP_000895396.1;transl_table=11
NZ_CAAR01000174.1	RefSeq	gene	747	1463	.	-	.	ID=gene-STY7866_RS06910;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=STY7866_RS06910
NZ_CAAR01000174.1	Protein Homology	CDS	747	1463	.	-	0	ID=cds-WP_001001677.1;Parent=gene-STY7866_RS06910;Dbxref=Genbank:WP_001001677.1;Name=WP_001001677.1;gbkey=CDS;gene=artQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455416.1;locus_tag=STY7866_RS06910;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001677.1;transl_table=11
NZ_CAAR01000174.1	RefSeq	gene	1470	2201	.	-	.	ID=gene-STY7866_RS06915;Name=STY7866_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06915
NZ_CAAR01000174.1	Protein Homology	CDS	1470	2201	.	-	0	ID=cds-WP_000756586.1;Parent=gene-STY7866_RS06915;Dbxref=Genbank:WP_000756586.1;Name=WP_000756586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455417.1;locus_tag=STY7866_RS06915;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000756586.1;transl_table=11
NZ_CAAR01000174.1	RefSeq	gene	2219	2947	.	-	.	ID=gene-STY7866_RS06920;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=STY7866_RS06920
NZ_CAAR01000174.1	Protein Homology	CDS	2219	2947	.	-	0	ID=cds-WP_000027186.1;Parent=gene-STY7866_RS06920;Dbxref=Genbank:WP_000027186.1;Name=WP_000027186.1;gbkey=CDS;gene=artP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=STY7866_RS06920;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027186.1;transl_table=11
NZ_CAAR01000174.1	RefSeq	gene	3176	3691	.	-	.	ID=gene-STY7866_RS06925;Name=STY7866_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06925
NZ_CAAR01000174.1	Protein Homology	CDS	3176	3691	.	-	0	ID=cds-WP_001270727.1;Parent=gene-STY7866_RS06925;Dbxref=Genbank:WP_001270727.1;Name=WP_001270727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455419.1;locus_tag=STY7866_RS06925;product=lipoprotein;protein_id=WP_001270727.1;transl_table=11
NZ_CAAR01000174.1	RefSeq	gene	3819	4142	.	+	.	ID=gene-STY7866_RS06930;Name=STY7866_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06930
NZ_CAAR01000174.1	Protein Homology	CDS	3819	4142	.	+	0	ID=cds-WP_001160725.1;Parent=gene-STY7866_RS06930;Dbxref=Genbank:WP_001160725.1;Name=WP_001160725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455420.1;locus_tag=STY7866_RS06930;product=heavy metal-binding domain-containing protein;protein_id=WP_001160725.1;transl_table=11
NZ_CAAR01000174.1	RefSeq	gene	4139	4969	.	+	.	ID=gene-STY7866_RS06935;Name=STY7866_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06935
NZ_CAAR01000174.1	Protein Homology	CDS	4139	4969	.	+	0	ID=cds-WP_000645850.1;Parent=gene-STY7866_RS06935;Dbxref=Genbank:WP_000645850.1;Name=WP_000645850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455421.1;locus_tag=STY7866_RS06935;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_000645850.1;transl_table=11
NZ_CAAR01000174.1	RefSeq	gene	4966	5979	.	-	.	ID=gene-STY7866_RS06940;Name=STY7866_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06940
NZ_CAAR01000174.1	Protein Homology	CDS	4966	5979	.	-	0	ID=cds-WP_000866904.1;Parent=gene-STY7866_RS06940;Dbxref=Genbank:WP_000866904.1;Name=WP_000866904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455422.1;locus_tag=STY7866_RS06940;product=NAD(P)-dependent oxidoreductase;protein_id=WP_000866904.1;transl_table=11
NZ_CAAR01000174.1	RefSeq	gene	6075	7508	.	-	.	ID=gene-STY7866_RS06945;Name=STY7866_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06945
NZ_CAAR01000174.1	Protein Homology	CDS	6075	7508	.	-	0	ID=cds-WP_000079004.1;Parent=gene-STY7866_RS06945;Dbxref=Genbank:WP_000079004.1;Name=WP_000079004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455423.1;locus_tag=STY7866_RS06945;product=SDR family oxidoreductase;protein_id=WP_000079004.1;transl_table=11
NZ_CAAR01000174.1	RefSeq	gene	7519	8520	.	-	.	ID=gene-STY7866_RS06950;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=STY7866_RS06950
NZ_CAAR01000174.1	Protein Homology	CDS	7519	8520	.	-	0	ID=cds-WP_000566341.1;Parent=gene-STY7866_RS06950;Dbxref=Genbank:WP_000566341.1;Name=WP_000566341.1;gbkey=CDS;gene=ltaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455424.1;locus_tag=STY7866_RS06950;product=low-specificity L-threonine aldolase;protein_id=WP_000566341.1;transl_table=11
NZ_CAAR01000174.1	RefSeq	gene	8559	10277	.	-	.	ID=gene-STY7866_RS06955;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=STY7866_RS06955
NZ_CAAR01000174.1	Protein Homology	CDS	8559	10277	.	-	0	ID=cds-WP_000815309.1;Parent=gene-STY7866_RS06955;Dbxref=Genbank:WP_000815309.1;Name=WP_000815309.1;gbkey=CDS;gene=poxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532507.1;locus_tag=STY7866_RS06955;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_000815309.1;transl_table=11
NZ_CAAR01000174.1	RefSeq	gene	10435	11234	.	-	.	ID=gene-STY7866_RS06960;Name=STY7866_RS06960;end_range=11234,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06960;partial=true
NZ_CAAR01000174.1	Protein Homology	CDS	10435	11234	.	-	2	ID=cds-WP_000318012.1;Parent=gene-STY7866_RS06960;Dbxref=Genbank:WP_000318012.1;Name=WP_000318012.1;end_range=11234,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455426.1;locus_tag=STY7866_RS06960;partial=true;product=NADH oxidoreductase;protein_id=WP_000318012.1;transl_table=11
##sequence-region NZ_CAAR01000173.1 1 45082
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000173.1	RefSeq	region	1	45082	.	+	.	ID=NZ_CAAR01000173.1:1..45082;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000173.1	RefSeq	gene	1	644	.	+	.	ID=gene-STY7866_RS06675;Name=STY7866_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06675;partial=true;start_range=.,1
NZ_CAAR01000173.1	Protein Homology	CDS	1	644	.	+	2	ID=cds-WP_000317712.1;Parent=gene-STY7866_RS06675;Dbxref=Genbank:WP_000317712.1;Name=WP_000317712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458065.1;locus_tag=STY7866_RS06675;partial=true;product=VWA domain-containing protein;protein_id=WP_000317712.1;start_range=.,1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	649	1641	.	-	.	ID=gene-STY7866_RS06680;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=STY7866_RS06680
NZ_CAAR01000173.1	Protein Homology	CDS	649	1641	.	-	0	ID=cds-WP_000845119.1;Parent=gene-STY7866_RS06680;Dbxref=Genbank:WP_000845119.1;Name=WP_000845119.1;gbkey=CDS;gene=asnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458066.1;locus_tag=STY7866_RS06680;product=aspartate--ammonia ligase;protein_id=WP_000845119.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	1792	2250	.	+	.	ID=gene-STY7866_RS06685;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=STY7866_RS06685
NZ_CAAR01000173.1	Protein Homology	CDS	1792	2250	.	+	0	ID=cds-WP_000433016.1;Parent=gene-STY7866_RS06685;Dbxref=Genbank:WP_000433016.1;Name=WP_000433016.1;gbkey=CDS;gene=asnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458067.1;locus_tag=STY7866_RS06685;product=transcriptional regulator AsnC;protein_id=WP_000433016.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	pseudogene	2340	2784	.	+	.	ID=gene-STY7866_RS06690;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=pseudogene;locus_tag=STY7866_RS06690;pseudo=true
NZ_CAAR01000173.1	Protein Homology	CDS	2340	2784	.	+	0	ID=cds-STY7866_RS06690;Parent=gene-STY7866_RS06690;Note=frameshifted;gbkey=CDS;gene=mioC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458068.1;locus_tag=STY7866_RS06690;product=FMN-binding protein MioC;pseudo=true;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	3163	5052	.	+	.	ID=gene-STY7866_RS06695;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=STY7866_RS06695
NZ_CAAR01000173.1	Protein Homology	CDS	3163	5052	.	+	0	ID=cds-WP_000499882.1;Parent=gene-STY7866_RS06695;Dbxref=Genbank:WP_000499882.1;Name=WP_000499882.1;gbkey=CDS;gene=mnmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=STY7866_RS06695;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499882.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	5155	5778	.	+	.	ID=gene-STY7866_RS06700;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=STY7866_RS06700
NZ_CAAR01000173.1	Protein Homology	CDS	5155	5778	.	+	0	ID=cds-WP_001519938.1;Parent=gene-STY7866_RS06700;Dbxref=Genbank:WP_001519938.1;Name=WP_001519938.1;gbkey=CDS;gene=rsmG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458070.1;locus_tag=STY7866_RS06700;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_001519938.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	6392	6772	.	+	.	ID=gene-STY7866_RS06705;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=STY7866_RS06705
NZ_CAAR01000173.1	Protein Homology	CDS	6392	6772	.	+	0	ID=cds-WP_001145371.1;Parent=gene-STY7866_RS06705;Dbxref=Genbank:WP_001145371.1;Name=WP_001145371.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458071.1;locus_tag=STY7866_RS06705;product=F0F1 ATP synthase subunit I;protein_id=WP_001145371.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	6781	7596	.	+	.	ID=gene-STY7866_RS06710;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=STY7866_RS06710
NZ_CAAR01000173.1	Protein Homology	CDS	6781	7596	.	+	0	ID=cds-WP_000135632.1;Parent=gene-STY7866_RS06710;Dbxref=Genbank:WP_000135632.1;Name=WP_000135632.1;gbkey=CDS;gene=atpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=STY7866_RS06710;product=F0F1 ATP synthase subunit A;protein_id=WP_000135632.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	7643	7882	.	+	.	ID=gene-STY7866_RS06715;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=STY7866_RS06715
NZ_CAAR01000173.1	Protein Homology	CDS	7643	7882	.	+	0	ID=cds-WP_000429386.1;Parent=gene-STY7866_RS06715;Dbxref=Genbank:WP_000429386.1;Name=WP_000429386.1;gbkey=CDS;gene=atpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312706.1;locus_tag=STY7866_RS06715;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	7942	8412	.	+	.	ID=gene-STY7866_RS06720;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=STY7866_RS06720
NZ_CAAR01000173.1	Protein Homology	CDS	7942	8412	.	+	0	ID=cds-WP_001052212.1;Parent=gene-STY7866_RS06720;Dbxref=Genbank:WP_001052212.1;Name=WP_001052212.1;gbkey=CDS;gene=atpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=STY7866_RS06720;product=F0F1 ATP synthase subunit B;protein_id=WP_001052212.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	8427	8960	.	+	.	ID=gene-STY7866_RS06725;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=STY7866_RS06725
NZ_CAAR01000173.1	Protein Homology	CDS	8427	8960	.	+	0	ID=cds-WP_001288957.1;Parent=gene-STY7866_RS06725;Dbxref=Genbank:WP_001288957.1;Name=WP_001288957.1;gbkey=CDS;gene=atpH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=STY7866_RS06725;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288957.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	8973	10514	.	+	.	ID=gene-STY7866_RS06730;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=STY7866_RS06730
NZ_CAAR01000173.1	Protein Homology	CDS	8973	10514	.	+	0	ID=cds-WP_001176756.1;Parent=gene-STY7866_RS06730;Dbxref=Genbank:WP_001176756.1;Name=WP_001176756.1;gbkey=CDS;gene=atpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=STY7866_RS06730;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176756.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	10565	11428	.	+	.	ID=gene-STY7866_RS06735;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=STY7866_RS06735
NZ_CAAR01000173.1	Protein Homology	CDS	10565	11428	.	+	0	ID=cds-WP_000896504.1;Parent=gene-STY7866_RS06735;Dbxref=Genbank:WP_000896504.1;Name=WP_000896504.1;gbkey=CDS;gene=atpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077994.1;locus_tag=STY7866_RS06735;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896504.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	11455	12837	.	+	.	ID=gene-STY7866_RS06740;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=STY7866_RS06740
NZ_CAAR01000173.1	Protein Homology	CDS	11455	12837	.	+	0	ID=cds-WP_000190499.1;Parent=gene-STY7866_RS06740;Dbxref=Genbank:WP_000190499.1;Name=WP_000190499.1;gbkey=CDS;gene=atpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=STY7866_RS06740;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190499.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	12858	13277	.	+	.	ID=gene-STY7866_RS06745;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=STY7866_RS06745
NZ_CAAR01000173.1	Protein Homology	CDS	12858	13277	.	+	0	ID=cds-WP_001251971.1;Parent=gene-STY7866_RS06745;Dbxref=Genbank:WP_001251971.1;Name=WP_001251971.1;gbkey=CDS;gene=atpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=STY7866_RS06745;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	pseudogene	13505	14202	.	+	.	ID=gene-STY7866_RS06755;Name=STY7866_RS06755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS06755;pseudo=true
NZ_CAAR01000173.1	Protein Homology	CDS	13505	14202	.	+	0	ID=cds-STY7866_RS06755;Parent=gene-STY7866_RS06755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458080.1;locus_tag=STY7866_RS06755;product=permease;pseudo=true;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	14522	15892	.	+	.	ID=gene-STY7866_RS06765;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=STY7866_RS06765
NZ_CAAR01000173.1	Protein Homology	CDS	14522	15892	.	+	0	ID=cds-WP_000934853.1;Parent=gene-STY7866_RS06765;Dbxref=Genbank:WP_000934853.1;Name=WP_000934853.1;gbkey=CDS;gene=glmU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458081.1;locus_tag=STY7866_RS06765;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000934853.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	16081	17910	.	+	.	ID=gene-STY7866_RS06770;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=STY7866_RS06770
NZ_CAAR01000173.1	Protein Homology	CDS	16081	17910	.	+	0	ID=cds-WP_000334049.1;Parent=gene-STY7866_RS06770;Dbxref=Genbank:WP_000334049.1;Name=WP_000334049.1;gbkey=CDS;gene=glmS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=STY7866_RS06770;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334049.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	18321	18896	.	+	.	ID=gene-STY7866_RS06775;Name=STY7866_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06775
NZ_CAAR01000173.1	Protein Homology	CDS	18321	18896	.	+	0	ID=cds-WP_000773772.1;Parent=gene-STY7866_RS06775;Dbxref=Genbank:WP_000773772.1;Name=WP_000773772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458083.1;locus_tag=STY7866_RS06775;product=fimbrial protein;protein_id=WP_000773772.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	pseudogene	18994	19693	.	+	.	ID=gene-STY7866_RS06780;Name=STY7866_RS06780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS06780;pseudo=true
NZ_CAAR01000173.1	Protein Homology	CDS	18994	19693	.	+	0	ID=cds-STY7866_RS06780;Parent=gene-STY7866_RS06780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458084.1;locus_tag=STY7866_RS06780;product=fimbrial chaperone;pseudo=true;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	19715	20227	.	+	.	ID=gene-STY7866_RS26985;Name=STY7866_RS26985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26985
NZ_CAAR01000173.1	Protein Homology	CDS	19715	20227	.	+	0	ID=cds-WP_024131224.1;Parent=gene-STY7866_RS26985;Dbxref=Genbank:WP_024131224.1;Name=WP_024131224.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13954.4;locus_tag=STY7866_RS26985;product=hypothetical protein;protein_id=WP_024131224.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	pseudogene	20330	22248	.	+	.	ID=gene-STY7866_RS26990;Name=STY7866_RS26990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26990;pseudo=true
NZ_CAAR01000173.1	Protein Homology	CDS	20330	22248	.	+	0	ID=cds-STY7866_RS26990;Parent=gene-STY7866_RS26990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001247056.1;locus_tag=STY7866_RS26990;product=fimbrial biogenesis outer membrane usher protein;pseudo=true;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	22260	23327	.	+	.	ID=gene-STY7866_RS06795;Name=stgD;gbkey=Gene;gene=stgD;gene_biotype=protein_coding;locus_tag=STY7866_RS06795
NZ_CAAR01000173.1	Protein Homology	CDS	22260	23327	.	+	0	ID=cds-WP_001241930.1;Parent=gene-STY7866_RS06795;Dbxref=Genbank:WP_001241930.1;Name=WP_001241930.1;gbkey=CDS;gene=stgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458085.1;locus_tag=STY7866_RS06795;product=fimbrial protein StgD;protein_id=WP_001241930.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	23358	25115	.	-	.	ID=gene-STY7866_RS06800;Name=STY7866_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06800
NZ_CAAR01000173.1	Protein Homology	CDS	23358	25115	.	-	0	ID=cds-WP_000235491.1;Parent=gene-STY7866_RS06800;Dbxref=Genbank:WP_000235491.1;Name=WP_000235491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458086.1;locus_tag=STY7866_RS06800;product=SgrR family transcriptional regulator;protein_id=WP_000235491.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	25210	25980	.	+	.	ID=gene-STY7866_RS06805;Name=STY7866_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06805
NZ_CAAR01000173.1	Protein Homology	CDS	25210	25980	.	+	0	ID=cds-WP_000166706.1;Parent=gene-STY7866_RS06805;Dbxref=Genbank:WP_000166706.1;Name=WP_000166706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458087.1;locus_tag=STY7866_RS06805;product=shikimate 5-dehydrogenase;protein_id=WP_000166706.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	26029	27402	.	+	.	ID=gene-STY7866_RS06810;Name=STY7866_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06810
NZ_CAAR01000173.1	Protein Homology	CDS	26029	27402	.	+	0	ID=cds-WP_000162538.1;Parent=gene-STY7866_RS06810;Dbxref=Genbank:WP_000162538.1;Name=WP_000162538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458088.1;locus_tag=STY7866_RS06810;product=PTS transporter subunit EIIC;protein_id=WP_000162538.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	27569	28609	.	+	.	ID=gene-STY7866_RS06815;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=STY7866_RS06815
NZ_CAAR01000173.1	Protein Homology	CDS	27569	28609	.	+	0	ID=cds-WP_000867129.1;Parent=gene-STY7866_RS06815;Dbxref=Genbank:WP_000867129.1;Name=WP_000867129.1;gbkey=CDS;gene=pstS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000867129.1;locus_tag=STY7866_RS06815;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867129.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	28745	29704	.	+	.	ID=gene-STY7866_RS06820;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=STY7866_RS06820
NZ_CAAR01000173.1	Protein Homology	CDS	28745	29704	.	+	0	ID=cds-WP_000741630.1;Parent=gene-STY7866_RS06820;Dbxref=Genbank:WP_000741630.1;Name=WP_000741630.1;gbkey=CDS;gene=pstC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458090.1;locus_tag=STY7866_RS06820;product=phosphate ABC transporter permease PstC;protein_id=WP_000741630.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	29704	30594	.	+	.	ID=gene-STY7866_RS06825;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=STY7866_RS06825
NZ_CAAR01000173.1	Protein Homology	CDS	29704	30594	.	+	0	ID=cds-WP_000212190.1;Parent=gene-STY7866_RS06825;Dbxref=Genbank:WP_000212190.1;Name=WP_000212190.1;gbkey=CDS;gene=pstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458091.1;locus_tag=STY7866_RS06825;product=phosphate ABC transporter permease PstA;protein_id=WP_000212190.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	30681	31454	.	+	.	ID=gene-STY7866_RS06830;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=STY7866_RS06830
NZ_CAAR01000173.1	Protein Homology	CDS	30681	31454	.	+	0	ID=cds-WP_000063118.1;Parent=gene-STY7866_RS06830;Dbxref=Genbank:WP_000063118.1;Name=WP_000063118.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=STY7866_RS06830;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063118.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	31469	32194	.	+	.	ID=gene-STY7866_RS06835;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=STY7866_RS06835
NZ_CAAR01000173.1	Protein Homology	CDS	31469	32194	.	+	0	ID=cds-WP_000377800.1;Parent=gene-STY7866_RS06835;Dbxref=Genbank:WP_000377800.1;Name=WP_000377800.1;gbkey=CDS;gene=phoU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435540.1;locus_tag=STY7866_RS06835;product=phosphate signaling complex protein PhoU;protein_id=WP_000377800.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	32289	32954	.	-	.	ID=gene-STY7866_RS06840;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=STY7866_RS06840
NZ_CAAR01000173.1	Protein Homology	CDS	32289	32954	.	-	0	ID=cds-WP_000078084.1;Parent=gene-STY7866_RS06840;Dbxref=Genbank:WP_000078084.1;Name=WP_000078084.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458094.1;locus_tag=STY7866_RS06840;product=6-phosphogluconate phosphatase;protein_id=WP_000078084.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	33123	34460	.	+	.	ID=gene-STY7866_RS06845;Name=STY7866_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06845
NZ_CAAR01000173.1	Protein Homology	CDS	33123	34460	.	+	0	ID=cds-WP_001583487.1;Parent=gene-STY7866_RS06845;Dbxref=Genbank:WP_001583487.1;Name=WP_001583487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=STY7866_RS06845;product=NCS2 family permease;protein_id=WP_001583487.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	34505	35089	.	-	.	ID=gene-STY7866_RS06850;Name=STY7866_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06850
NZ_CAAR01000173.1	Protein Homology	CDS	34505	35089	.	-	0	ID=cds-WP_021013212.1;Parent=gene-STY7866_RS06850;Dbxref=Genbank:WP_021013212.1;Name=WP_021013212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458096.3;locus_tag=STY7866_RS06850;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_021013212.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	35089	35844	.	-	.	ID=gene-STY7866_RS06855;Name=STY7866_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06855
NZ_CAAR01000173.1	Protein Homology	CDS	35089	35844	.	-	0	ID=cds-WP_000190678.1;Parent=gene-STY7866_RS06855;Dbxref=Genbank:WP_000190678.1;Name=WP_000190678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458097.1;locus_tag=STY7866_RS06855;product=hypothetical protein;protein_id=WP_000190678.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	36002	36961	.	-	.	ID=gene-STY7866_RS06860;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=STY7866_RS06860
NZ_CAAR01000173.1	Protein Homology	CDS	36002	36961	.	-	0	ID=cds-WP_000749374.1;Parent=gene-STY7866_RS06860;Dbxref=Genbank:WP_000749374.1;Name=WP_000749374.1;gbkey=CDS;gene=yidZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=STY7866_RS06860;product=HTH-type transcriptional regulator YidZ;protein_id=WP_000749374.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	36930	38117	.	-	.	ID=gene-STY7866_RS06865;Name=STY7866_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06865
NZ_CAAR01000173.1	Protein Homology	CDS	36930	38117	.	-	0	ID=cds-WP_000819608.1;Parent=gene-STY7866_RS06865;Dbxref=Genbank:WP_000819608.1;Name=WP_000819608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458099.1;locus_tag=STY7866_RS06865;product=MFS transporter;protein_id=WP_000819608.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	38300	39664	.	-	.	ID=gene-STY7866_RS06870;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=STY7866_RS06870
NZ_CAAR01000173.1	Protein Homology	CDS	38300	39664	.	-	0	ID=cds-WP_000019075.1;Parent=gene-STY7866_RS06870;Dbxref=Genbank:WP_000019075.1;Name=WP_000019075.1;gbkey=CDS;gene=mnmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458100.1;locus_tag=STY7866_RS06870;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_000019075.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	39806	41452	.	-	.	ID=gene-STY7866_RS06875;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=STY7866_RS06875
NZ_CAAR01000173.1	Protein Homology	CDS	39806	41452	.	-	0	ID=cds-WP_000378272.1;Parent=gene-STY7866_RS06875;Dbxref=Genbank:WP_000378272.1;Name=WP_000378272.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458101.1;locus_tag=STY7866_RS06875;product=membrane protein insertase YidC;protein_id=WP_000378272.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	41455	41712	.	-	.	ID=gene-STY7866_RS06880;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=STY7866_RS06880
NZ_CAAR01000173.1	Protein Homology	CDS	41455	41712	.	-	0	ID=cds-WP_001307474.1;Parent=gene-STY7866_RS06880;Dbxref=Genbank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=STY7866_RS06880;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	41676	42035	.	-	.	ID=gene-STY7866_RS06885;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=STY7866_RS06885
NZ_CAAR01000173.1	Protein Homology	CDS	41676	42035	.	-	0	ID=cds-WP_000239725.1;Parent=gene-STY7866_RS06885;Dbxref=Genbank:WP_000239725.1;Name=WP_000239725.1;gbkey=CDS;gene=rnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=STY7866_RS06885;product=ribonuclease P protein component;protein_id=WP_000239725.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	pseudogene	42052	42193	.	-	.	ID=gene-STY7866_RS06890;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=pseudogene;locus_tag=STY7866_RS06890;pseudo=true
NZ_CAAR01000173.1	Protein Homology	CDS	42052	42193	.	-	0	ID=cds-STY7866_RS06890;Parent=gene-STY7866_RS06890;Note=frameshifted;gbkey=CDS;gene=rpmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=STY7866_RS06890;product=50S ribosomal protein L34;pseudo=true;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	42854	44254	.	+	.	ID=gene-STY7866_RS06895;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=STY7866_RS06895
NZ_CAAR01000173.1	Protein Homology	CDS	42854	44254	.	+	0	ID=cds-WP_000059095.1;Parent=gene-STY7866_RS06895;Dbxref=Genbank:WP_000059095.1;Name=WP_000059095.1;gbkey=CDS;gene=dnaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458104.1;locus_tag=STY7866_RS06895;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059095.1;transl_table=11
NZ_CAAR01000173.1	RefSeq	gene	44259	45082	.	+	.	ID=gene-STY7866_RS06900;Name=dnaN;end_range=45082,.;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=STY7866_RS06900;partial=true
NZ_CAAR01000173.1	Protein Homology	CDS	44259	45082	.	+	0	ID=cds-WP_000673471.1;Parent=gene-STY7866_RS06900;Dbxref=Genbank:WP_000673471.1;Name=WP_000673471.1;end_range=45082,.;gbkey=CDS;gene=dnaN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=STY7866_RS06900;partial=true;product=DNA polymerase III subunit beta;protein_id=WP_000673471.1;transl_table=11
##sequence-region NZ_CAAR01000172.1 1 13076
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000172.1	RefSeq	region	1	13076	.	+	.	ID=NZ_CAAR01000172.1:1..13076;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000172.1	RefSeq	pseudogene	1	1627	.	-	.	ID=gene-STY7866_RS06610;Name=recG;gbkey=Gene;gene=recG;gene_biotype=pseudogene;locus_tag=STY7866_RS06610;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000172.1	Protein Homology	CDS	1	1627	.	-	0	ID=cds-STY7866_RS06610;Parent=gene-STY7866_RS06610;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;gene=recG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122596.1;locus_tag=STY7866_RS06610;partial=true;product=ATP-dependent DNA helicase RecG;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000172.1	RefSeq	gene	1633	2322	.	-	.	ID=gene-STY7866_RS06615;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=STY7866_RS06615
NZ_CAAR01000172.1	Protein Homology	CDS	1633	2322	.	-	0	ID=cds-WP_001068431.1;Parent=gene-STY7866_RS06615;Dbxref=Genbank:WP_001068431.1;Name=WP_001068431.1;gbkey=CDS;gene=trmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458184.1;locus_tag=STY7866_RS06615;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001068431.1;transl_table=11
NZ_CAAR01000172.1	RefSeq	gene	2327	4438	.	-	.	ID=gene-STY7866_RS06620;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=STY7866_RS06620
NZ_CAAR01000172.1	Protein Homology	CDS	2327	4438	.	-	0	ID=cds-WP_000280498.1;Parent=gene-STY7866_RS06620;Dbxref=Genbank:WP_000280498.1;Name=WP_000280498.1;gbkey=CDS;gene=spoT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455762.1;locus_tag=STY7866_RS06620;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280498.1;transl_table=11
NZ_CAAR01000172.1	RefSeq	gene	4457	4732	.	-	.	ID=gene-STY7866_RS06625;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=STY7866_RS06625
NZ_CAAR01000172.1	Protein Homology	CDS	4457	4732	.	-	0	ID=cds-WP_000135058.1;Parent=gene-STY7866_RS06625;Dbxref=Genbank:WP_000135058.1;Name=WP_000135058.1;gbkey=CDS;gene=rpoZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=STY7866_RS06625;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11
NZ_CAAR01000172.1	RefSeq	gene	4787	5410	.	-	.	ID=gene-STY7866_RS06630;Name=STY7866_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06630
NZ_CAAR01000172.1	Protein Homology	CDS	4787	5410	.	-	0	ID=cds-WP_000046966.1;Parent=gene-STY7866_RS06630;Dbxref=Genbank:WP_000046966.1;Name=WP_000046966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=STY7866_RS06630;product=guanylate kinase;protein_id=WP_000046966.1;transl_table=11
NZ_CAAR01000172.1	RefSeq	pseudogene	5667	7351	.	+	.	ID=gene-STY7866_RS06635;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=pseudogene;locus_tag=STY7866_RS06635;pseudo=true
NZ_CAAR01000172.1	Protein Homology	CDS	5667	7351	.	+	0	ID=cds-STY7866_RS06635;Parent=gene-STY7866_RS06635;Note=frameshifted;gbkey=CDS;gene=ligB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=STY7866_RS06635;product=NAD-dependent DNA ligase LigB;pseudo=true;transl_table=11
NZ_CAAR01000172.1	RefSeq	pseudogene	7348	7966	.	-	.	ID=gene-STY7866_RS06640;Name=STY7866_RS06640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS06640;pseudo=true
NZ_CAAR01000172.1	Protein Homology	CDS	7348	7966	.	-	0	ID=cds-STY7866_RS06640;Parent=gene-STY7866_RS06640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458188.1;locus_tag=STY7866_RS06640;product=trimeric intracellular cation channel family protein;pseudo=true;transl_table=11
NZ_CAAR01000172.1	RefSeq	gene	8214	9098	.	-	.	ID=gene-STY7866_RS06645;Name=STY7866_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06645
NZ_CAAR01000172.1	Protein Homology	CDS	8214	9098	.	-	0	ID=cds-WP_001083231.1;Parent=gene-STY7866_RS06645;Dbxref=Genbank:WP_001083231.1;Name=WP_001083231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458189.1;locus_tag=STY7866_RS06645;product=HARLDQ motif MBL-fold protein;protein_id=WP_001083231.1;transl_table=11
NZ_CAAR01000172.1	RefSeq	gene	9172	10074	.	+	.	ID=gene-STY7866_RS06650;Name=STY7866_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06650
NZ_CAAR01000172.1	Protein Homology	CDS	9172	10074	.	+	0	ID=cds-WP_001050861.1;Parent=gene-STY7866_RS06650;Dbxref=Genbank:WP_001050861.1;Name=WP_001050861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458190.1;locus_tag=STY7866_RS06650;product=LysR family transcriptional regulator;protein_id=WP_001050861.1;transl_table=11
NZ_CAAR01000172.1	RefSeq	gene	10124	10987	.	-	.	ID=gene-STY7866_RS06655;Name=STY7866_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06655
NZ_CAAR01000172.1	Protein Homology	CDS	10124	10987	.	-	0	ID=cds-WP_000621352.1;Parent=gene-STY7866_RS06655;Dbxref=Genbank:WP_000621352.1;Name=WP_000621352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=STY7866_RS06655;product=YicC family protein;protein_id=WP_000621352.1;transl_table=11
NZ_CAAR01000172.1	RefSeq	gene	11113	11829	.	+	.	ID=gene-STY7866_RS06660;Name=STY7866_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06660
NZ_CAAR01000172.1	Protein Homology	CDS	11113	11829	.	+	0	ID=cds-WP_001247078.1;Parent=gene-STY7866_RS06660;Dbxref=Genbank:WP_001247078.1;Name=WP_001247078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=STY7866_RS06660;product=ribonuclease PH;protein_id=WP_001247078.1;transl_table=11
NZ_CAAR01000172.1	RefSeq	gene	11908	12549	.	+	.	ID=gene-STY7866_RS06665;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=STY7866_RS06665
NZ_CAAR01000172.1	Protein Homology	CDS	11908	12549	.	+	0	ID=cds-WP_000806169.1;Parent=gene-STY7866_RS06665;Dbxref=Genbank:WP_000806169.1;Name=WP_000806169.1;gbkey=CDS;gene=pyrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458193.1;locus_tag=STY7866_RS06665;product=orotate phosphoribosyltransferase;protein_id=WP_000806169.1;transl_table=11
NZ_CAAR01000172.1	RefSeq	gene	12627	13076	.	-	.	ID=gene-STY7866_RS06670;Name=slmA;end_range=13076,.;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=STY7866_RS06670;partial=true
NZ_CAAR01000172.1	Protein Homology	CDS	12627	13076	.	-	0	ID=cds-WP_001764001.1;Parent=gene-STY7866_RS06670;Dbxref=Genbank:WP_001764001.1;Name=WP_001764001.1;end_range=13076,.;gbkey=CDS;gene=slmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=STY7866_RS06670;partial=true;product=nucleoid occlusion factor SlmA;protein_id=WP_001764001.1;transl_table=11
##sequence-region NZ_CAAR01000171.1 1 17149
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000171.1	RefSeq	region	1	17149	.	+	.	ID=NZ_CAAR01000171.1:1..17149;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000171.1	RefSeq	pseudogene	1	104	.	+	.	ID=gene-STY7866_RS26975;Name=STY7866_RS26975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26975;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000171.1	Protein Homology	CDS	1	104	.	+	2	ID=cds-STY7866_RS26975;Parent=gene-STY7866_RS26975;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458700.1;locus_tag=STY7866_RS26975;partial=true;product=LysB family phage lysis regulatory protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000171.1	RefSeq	gene	200	631	.	+	.	ID=gene-STY7866_RS06500;Name=STY7866_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06500
NZ_CAAR01000171.1	Protein Homology	CDS	200	631	.	+	0	ID=cds-WP_001039961.1;Parent=gene-STY7866_RS06500;Dbxref=Genbank:WP_001039961.1;Name=WP_001039961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458699.1;locus_tag=STY7866_RS06500;product=phage tail protein;protein_id=WP_001039961.1;transl_table=11
NZ_CAAR01000171.1	RefSeq	gene	624	1070	.	+	.	ID=gene-STY7866_RS06505;Name=STY7866_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06505
NZ_CAAR01000171.1	Protein Homology	CDS	624	1070	.	+	0	ID=cds-WP_000343944.1;Parent=gene-STY7866_RS06505;Dbxref=Genbank:WP_000343944.1;Name=WP_000343944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458698.1;locus_tag=STY7866_RS06505;product=phage virion morphogenesis protein;protein_id=WP_000343944.1;transl_table=11
NZ_CAAR01000171.1	RefSeq	gene	1139	1717	.	+	.	ID=gene-STY7866_RS06510;Name=STY7866_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06510
NZ_CAAR01000171.1	Protein Homology	CDS	1139	1717	.	+	0	ID=cds-WP_000993749.1;Parent=gene-STY7866_RS06510;Dbxref=Genbank:WP_000993749.1;Name=WP_000993749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458697.1;locus_tag=STY7866_RS06510;product=phage baseplate assembly protein V;protein_id=WP_000993749.1;transl_table=11
NZ_CAAR01000171.1	RefSeq	gene	1714	2073	.	+	.	ID=gene-STY7866_RS06515;Name=STY7866_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06515
NZ_CAAR01000171.1	Protein Homology	CDS	1714	2073	.	+	0	ID=cds-WP_000177408.1;Parent=gene-STY7866_RS06515;Dbxref=Genbank:WP_000177408.1;Name=WP_000177408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458696.1;locus_tag=STY7866_RS06515;product=baseplate assembly protein;protein_id=WP_000177408.1;transl_table=11
NZ_CAAR01000171.1	RefSeq	gene	2060	2968	.	+	.	ID=gene-STY7866_RS06520;Name=STY7866_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06520
NZ_CAAR01000171.1	Protein Homology	CDS	2060	2968	.	+	0	ID=cds-WP_000268328.1;Parent=gene-STY7866_RS06520;Dbxref=Genbank:WP_000268328.1;Name=WP_000268328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461636.1;locus_tag=STY7866_RS06520;product=baseplate assembly protein;protein_id=WP_000268328.1;transl_table=11
NZ_CAAR01000171.1	RefSeq	gene	2961	3566	.	+	.	ID=gene-STY7866_RS06525;Name=STY7866_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06525
NZ_CAAR01000171.1	Protein Homology	CDS	2961	3566	.	+	0	ID=cds-WP_001086800.1;Parent=gene-STY7866_RS06525;Dbxref=Genbank:WP_001086800.1;Name=WP_001086800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461635.1;locus_tag=STY7866_RS06525;product=phage tail protein I;protein_id=WP_001086800.1;transl_table=11
NZ_CAAR01000171.1	RefSeq	pseudogene	3563	5181	.	+	.	ID=gene-STY7866_RS26395;Name=STY7866_RS26395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26395;pseudo=true
NZ_CAAR01000171.1	Protein Homology	CDS	3563	5181	.	+	0	ID=cds-STY7866_RS26395;Parent=gene-STY7866_RS26395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458693.1;locus_tag=STY7866_RS26395;product=phage tail protein;pseudo=true;transl_table=11
NZ_CAAR01000171.1	RefSeq	gene	5188	5595	.	+	.	ID=gene-STY7866_RS06540;Name=STY7866_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06540
NZ_CAAR01000171.1	Protein Homology	CDS	5188	5595	.	+	0	ID=cds-WP_000006337.1;Parent=gene-STY7866_RS06540;Dbxref=Genbank:WP_000006337.1;Name=WP_000006337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458692.1;locus_tag=STY7866_RS06540;product=tail assembly protein;protein_id=WP_000006337.1;transl_table=11
NZ_CAAR01000171.1	RefSeq	pseudogene	5793	6514	.	-	.	ID=gene-STY7866_RS06545;Name=sopE;gbkey=Gene;gene=sopE;gene_biotype=pseudogene;locus_tag=STY7866_RS06545;pseudo=true
NZ_CAAR01000171.1	Protein Homology	CDS	5793	6514	.	-	0	ID=cds-STY7866_RS06545;Parent=gene-STY7866_RS06545;Note=frameshifted;gbkey=CDS;gene=sopE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458691.1;locus_tag=STY7866_RS06545;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE;pseudo=true;transl_table=11
NZ_CAAR01000171.1	RefSeq	gene	6728	6946	.	+	.	ID=gene-STY7866_RS06550;Name=STY7866_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06550
NZ_CAAR01000171.1	Protein Homology	CDS	6728	6946	.	+	0	ID=cds-WP_000388790.1;Parent=gene-STY7866_RS06550;Dbxref=Genbank:WP_000388790.1;Name=WP_000388790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015606335.1;locus_tag=STY7866_RS06550;product=Hin recombinase;protein_id=WP_000388790.1;transl_table=11
NZ_CAAR01000171.1	RefSeq	gene	7049	8221	.	+	.	ID=gene-STY7866_RS06555;Name=STY7866_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06555
NZ_CAAR01000171.1	Protein Homology	CDS	7049	8221	.	+	0	ID=cds-WP_000046101.1;Parent=gene-STY7866_RS06555;Dbxref=Genbank:WP_000046101.1;Name=WP_000046101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458690.1;locus_tag=STY7866_RS06555;product=phage tail sheath protein;protein_id=WP_000046101.1;transl_table=11
NZ_CAAR01000171.1	RefSeq	gene	8231	8746	.	+	.	ID=gene-STY7866_RS06560;Name=STY7866_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06560
NZ_CAAR01000171.1	Protein Homology	CDS	8231	8746	.	+	0	ID=cds-WP_001207653.1;Parent=gene-STY7866_RS06560;Dbxref=Genbank:WP_001207653.1;Name=WP_001207653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458689.1;locus_tag=STY7866_RS06560;product=phage major tail tube protein;protein_id=WP_001207653.1;transl_table=11
NZ_CAAR01000171.1	RefSeq	gene	8801	9103	.	+	.	ID=gene-STY7866_RS06565;Name=STY7866_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06565
NZ_CAAR01000171.1	Protein Homology	CDS	8801	9103	.	+	0	ID=cds-WP_001280965.1;Parent=gene-STY7866_RS06565;Dbxref=Genbank:WP_001280965.1;Name=WP_001280965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458688.1;locus_tag=STY7866_RS06565;product=phage tail assembly protein;protein_id=WP_001280965.1;transl_table=11
NZ_CAAR01000171.1	RefSeq	gene	9118	9237	.	+	.	ID=gene-STY7866_RS06570;Name=STY7866_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06570
NZ_CAAR01000171.1	Protein Homology	CDS	9118	9237	.	+	0	ID=cds-WP_000763315.1;Parent=gene-STY7866_RS06570;Dbxref=Genbank:WP_000763315.1;Name=WP_000763315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458687.1;locus_tag=STY7866_RS06570;product=GpE family phage tail protein;protein_id=WP_000763315.1;transl_table=11
NZ_CAAR01000171.1	RefSeq	pseudogene	9230	12009	.	+	.	ID=gene-STY7866_RS06575;Name=STY7866_RS06575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS06575;pseudo=true
NZ_CAAR01000171.1	Protein Homology	CDS	9230	12009	.	+	0	ID=cds-STY7866_RS06575;Parent=gene-STY7866_RS06575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458686.1;locus_tag=STY7866_RS06575;product=phage tail tape measure protein;pseudo=true;transl_table=11
NZ_CAAR01000171.1	RefSeq	pseudogene	12182	12268	.	+	.	ID=gene-STY7866_RS26980;Name=STY7866_RS26980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26980;partial=true;pseudo=true;start_range=.,12182
NZ_CAAR01000171.1	Protein Homology	CDS	12182	12268	.	+	0	ID=cds-STY7866_RS26980;Parent=gene-STY7866_RS26980;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490545.1;locus_tag=STY7866_RS26980;partial=true;product=peptidase;pseudo=true;start_range=.,12182;transl_table=11
NZ_CAAR01000171.1	RefSeq	gene	12268	13542	.	+	.	ID=gene-STY7866_RS06580;Name=STY7866_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06580
NZ_CAAR01000171.1	Protein Homology	CDS	12268	13542	.	+	0	ID=cds-WP_000457555.1;Parent=gene-STY7866_RS06580;Dbxref=Genbank:WP_000457555.1;Name=WP_000457555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458681.1;locus_tag=STY7866_RS06580;product=Y-family DNA polymerase;protein_id=WP_000457555.1;transl_table=11
NZ_CAAR01000171.1	RefSeq	gene	13674	13943	.	+	.	ID=gene-STY7866_RS06585;Name=STY7866_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06585
NZ_CAAR01000171.1	Protein Homology	CDS	13674	13943	.	+	0	ID=cds-WP_001222413.1;Parent=gene-STY7866_RS06585;Dbxref=Genbank:WP_001222413.1;Name=WP_001222413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222413.1;locus_tag=STY7866_RS06585;product=hypothetical protein;protein_id=WP_001222413.1;transl_table=11
NZ_CAAR01000171.1	RefSeq	gene	14043	14402	.	-	.	ID=gene-STY7866_RS06590;Name=STY7866_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06590
NZ_CAAR01000171.1	Protein Homology	CDS	14043	14402	.	-	0	ID=cds-WP_010989298.1;Parent=gene-STY7866_RS06590;Dbxref=Genbank:WP_010989298.1;Name=WP_010989298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458679.1;locus_tag=STY7866_RS06590;product=DUF3085 domain-containing protein;protein_id=WP_010989298.1;transl_table=11
NZ_CAAR01000171.1	RefSeq	gene	14444	15343	.	-	.	ID=gene-STY7866_RS06595;Name=STY7866_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06595
NZ_CAAR01000171.1	Protein Homology	CDS	14444	15343	.	-	0	ID=cds-WP_000022217.1;Parent=gene-STY7866_RS06595;Dbxref=Genbank:WP_000022217.1;Name=WP_000022217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458678.1;locus_tag=STY7866_RS06595;product=hypothetical protein;protein_id=WP_000022217.1;transl_table=11
NZ_CAAR01000171.1	RefSeq	gene	15417	16325	.	-	.	ID=gene-STY7866_RS06600;Name=STY7866_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06600
NZ_CAAR01000171.1	Protein Homology	CDS	15417	16325	.	-	0	ID=cds-WP_000881183.1;Parent=gene-STY7866_RS06600;Dbxref=Genbank:WP_000881183.1;Name=WP_000881183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458677.1;locus_tag=STY7866_RS06600;product=hypothetical protein;protein_id=WP_000881183.1;transl_table=11
NZ_CAAR01000171.1	RefSeq	pseudogene	16397	17149	.	-	.	ID=gene-STY7866_RS06605;Name=STY7866_RS06605;end_range=17149,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS06605;partial=true;pseudo=true
NZ_CAAR01000171.1	Protein Homology	CDS	16397	17149	.	-	2	ID=cds-STY7866_RS06605;Parent=gene-STY7866_RS06605;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=17149,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458676.1;locus_tag=STY7866_RS06605;partial=true;product=N-6 DNA methylase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000170.1 1 5665
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000170.1	RefSeq	region	1	5665	.	+	.	ID=NZ_CAAR01000170.1:1..5665;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000170.1	RefSeq	pseudogene	1	194	.	-	.	ID=gene-STY7866_RS06460;Name=folE;gbkey=Gene;gene=folE;gene_biotype=pseudogene;locus_tag=STY7866_RS06460;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000170.1	Protein Homology	CDS	1	194	.	-	0	ID=cds-STY7866_RS06460;Parent=gene-STY7866_RS06460;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=folE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456752.1;locus_tag=STY7866_RS06460;partial=true;product=GTP cyclohydrolase I FolE;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000170.1	RefSeq	gene	523	1380	.	+	.	ID=gene-STY7866_RS06465;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=STY7866_RS06465
NZ_CAAR01000170.1	Protein Homology	CDS	523	1380	.	+	0	ID=cds-WP_000425481.1;Parent=gene-STY7866_RS06465;Dbxref=Genbank:WP_000425481.1;Name=WP_000425481.1;gbkey=CDS;gene=fghA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456753.1;locus_tag=STY7866_RS06465;product=S-formylglutathione hydrolase;protein_id=WP_000425481.1;transl_table=11
NZ_CAAR01000170.1	RefSeq	gene	1369	1758	.	-	.	ID=gene-STY7866_RS06470;Name=STY7866_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06470
NZ_CAAR01000170.1	Protein Homology	CDS	1369	1758	.	-	0	ID=cds-WP_000876815.1;Parent=gene-STY7866_RS06470;Dbxref=Genbank:WP_000876815.1;Name=WP_000876815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456754.1;locus_tag=STY7866_RS06470;product=helix-turn-helix transcriptional regulator;protein_id=WP_000876815.1;transl_table=11
NZ_CAAR01000170.1	RefSeq	gene	1763	3130	.	-	.	ID=gene-STY7866_RS06475;Name=STY7866_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06475
NZ_CAAR01000170.1	Protein Homology	CDS	1763	3130	.	-	0	ID=cds-WP_000443204.1;Parent=gene-STY7866_RS06475;Dbxref=Genbank:WP_000443204.1;Name=WP_000443204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456755.1;locus_tag=STY7866_RS06475;product=L-serine ammonia-lyase;protein_id=WP_000443204.1;transl_table=11
NZ_CAAR01000170.1	RefSeq	gene	3347	4234	.	+	.	ID=gene-STY7866_RS06480;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=STY7866_RS06480
NZ_CAAR01000170.1	Protein Homology	CDS	3347	4234	.	+	0	ID=cds-WP_000022911.1;Parent=gene-STY7866_RS06480;Dbxref=Genbank:WP_000022911.1;Name=WP_000022911.1;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456756.1;locus_tag=STY7866_RS06480;product=phosphoserine phosphatase SerB;protein_id=WP_000022911.1;transl_table=11
NZ_CAAR01000170.1	RefSeq	pseudogene	4267	5589	.	+	.	ID=gene-STY7866_RS26970;Name=STY7866_RS26970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26970;pseudo=true
NZ_CAAR01000170.1	Protein Homology	CDS	4267	5589	.	+	0	ID=cds-STY7866_RS26970;Parent=gene-STY7866_RS26970;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=STY7866_RS26970;product=MFS transporter;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000169.1 1 8918
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000169.1	RefSeq	region	1	8918	.	+	.	ID=NZ_CAAR01000169.1:1..8918;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000169.1	RefSeq	gene	1	240	.	-	.	ID=gene-STY7866_RS06415;Name=STY7866_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06415;partial=true;start_range=.,1
NZ_CAAR01000169.1	Protein Homology	CDS	1	240	.	-	0	ID=cds-WP_000290590.1;Parent=gene-STY7866_RS06415;Dbxref=Genbank:WP_000290590.1;Name=WP_000290590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456326.1;locus_tag=STY7866_RS06415;partial=true;product=Slp family lipoprotein;protein_id=WP_000290590.1;start_range=.,1;transl_table=11
NZ_CAAR01000169.1	RefSeq	gene	311	1006	.	-	.	ID=gene-STY7866_RS06420;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=STY7866_RS06420
NZ_CAAR01000169.1	Protein Homology	CDS	311	1006	.	-	0	ID=cds-WP_001221014.1;Parent=gene-STY7866_RS06420;Dbxref=Genbank:WP_001221014.1;Name=WP_001221014.1;gbkey=CDS;gene=tsaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456327.1;locus_tag=STY7866_RS06420;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001221014.1;transl_table=11
NZ_CAAR01000169.1	RefSeq	gene	1064	2974	.	-	.	ID=gene-STY7866_RS06425;Name=STY7866_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06425
NZ_CAAR01000169.1	Protein Homology	CDS	1064	2974	.	-	0	ID=cds-WP_000128807.1;Parent=gene-STY7866_RS06425;Dbxref=Genbank:WP_000128807.1;Name=WP_000128807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456328.1;locus_tag=STY7866_RS06425;product=ATP-dependent DNA helicase;protein_id=WP_000128807.1;transl_table=11
NZ_CAAR01000169.1	RefSeq	gene	3106	3450	.	+	.	ID=gene-STY7866_RS06430;Name=STY7866_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06430
NZ_CAAR01000169.1	Protein Homology	CDS	3106	3450	.	+	0	ID=cds-WP_000029549.1;Parent=gene-STY7866_RS06430;Dbxref=Genbank:WP_000029549.1;Name=WP_000029549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456329.1;locus_tag=STY7866_RS06430;product=RidA family protein;protein_id=WP_000029549.1;transl_table=11
NZ_CAAR01000169.1	RefSeq	gene	3456	3635	.	-	.	ID=gene-STY7866_RS06435;Name=STY7866_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06435
NZ_CAAR01000169.1	Protein Homology	CDS	3456	3635	.	-	0	ID=cds-WP_000457328.1;Parent=gene-STY7866_RS06435;Dbxref=Genbank:WP_000457328.1;Name=WP_000457328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456330.1;locus_tag=STY7866_RS06435;product=YoaH family protein;protein_id=WP_000457328.1;transl_table=11
NZ_CAAR01000169.1	RefSeq	gene	3716	5080	.	+	.	ID=gene-STY7866_RS06440;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=STY7866_RS06440
NZ_CAAR01000169.1	Protein Homology	CDS	3716	5080	.	+	0	ID=cds-WP_000978456.1;Parent=gene-STY7866_RS06440;Dbxref=Genbank:WP_000978456.1;Name=WP_000978456.1;gbkey=CDS;gene=pabB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456331.1;locus_tag=STY7866_RS06440;product=aminodeoxychorismate synthase component 1;protein_id=WP_000978456.1;transl_table=11
NZ_CAAR01000169.1	RefSeq	gene	5084	5662	.	+	.	ID=gene-STY7866_RS06445;Name=STY7866_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06445
NZ_CAAR01000169.1	Protein Homology	CDS	5084	5662	.	+	0	ID=cds-WP_000381544.1;Parent=gene-STY7866_RS06445;Dbxref=Genbank:WP_000381544.1;Name=WP_000381544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456332.1;locus_tag=STY7866_RS06445;product=CoA pyrophosphatase;protein_id=WP_000381544.1;transl_table=11
NZ_CAAR01000169.1	RefSeq	gene	5926	7290	.	+	.	ID=gene-STY7866_RS06450;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=STY7866_RS06450
NZ_CAAR01000169.1	Protein Homology	CDS	5926	7290	.	+	0	ID=cds-WP_000624274.1;Parent=gene-STY7866_RS06450;Dbxref=Genbank:WP_000624274.1;Name=WP_000624274.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456333.1;locus_tag=STY7866_RS06450;product=L-serine ammonia-lyase;protein_id=WP_000624274.1;transl_table=11
NZ_CAAR01000169.1	RefSeq	gene	7428	8918	.	+	.	ID=gene-STY7866_RS06455;Name=STY7866_RS06455;end_range=8918,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06455;partial=true
NZ_CAAR01000169.1	Protein Homology	CDS	7428	8918	.	+	0	ID=cds-WP_001192511.1;Parent=gene-STY7866_RS06455;Dbxref=Genbank:WP_001192511.1;Name=WP_001192511.1;end_range=8918,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456334.1;locus_tag=STY7866_RS06455;partial=true;product=cyclic diguanylate phosphodiesterase;protein_id=WP_001192511.1;transl_table=11
##sequence-region NZ_CAAR01000168.1 1 2876
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000168.1	RefSeq	region	1	2876	.	+	.	ID=NZ_CAAR01000168.1:1..2876;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000168.1	RefSeq	gene	141	611	.	+	.	ID=gene-STY7866_RS06390;Name=STY7866_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06390
NZ_CAAR01000168.1	Protein Homology	CDS	141	611	.	+	0	ID=cds-WP_000680120.1;Parent=gene-STY7866_RS06390;Dbxref=Genbank:WP_000680120.1;Name=WP_000680120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662679.1;locus_tag=STY7866_RS06390;product=hypothetical protein;protein_id=WP_000680120.1;transl_table=11
NZ_CAAR01000168.1	RefSeq	gene	679	1128	.	+	.	ID=gene-STY7866_RS06395;Name=STY7866_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06395
NZ_CAAR01000168.1	Protein Homology	CDS	679	1128	.	+	0	ID=cds-WP_010989205.1;Parent=gene-STY7866_RS06395;Dbxref=Genbank:WP_010989205.1;Name=WP_010989205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989205.1;locus_tag=STY7866_RS06395;product=hypothetical protein;protein_id=WP_010989205.1;transl_table=11
NZ_CAAR01000168.1	RefSeq	gene	1244	1687	.	+	.	ID=gene-STY7866_RS06400;Name=STY7866_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06400
NZ_CAAR01000168.1	Protein Homology	CDS	1244	1687	.	+	0	ID=cds-WP_000871136.1;Parent=gene-STY7866_RS06400;Dbxref=Genbank:WP_000871136.1;Name=WP_000871136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456684.1;locus_tag=STY7866_RS06400;product=hypothetical protein;protein_id=WP_000871136.1;transl_table=11
NZ_CAAR01000168.1	RefSeq	gene	1789	2502	.	+	.	ID=gene-STY7866_RS06405;Name=STY7866_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06405
NZ_CAAR01000168.1	Protein Homology	CDS	1789	2502	.	+	0	ID=cds-WP_010989204.1;Parent=gene-STY7866_RS06405;Dbxref=Genbank:WP_010989204.1;Name=WP_010989204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456683.1;locus_tag=STY7866_RS06405;product=hypothetical protein;protein_id=WP_010989204.1;transl_table=11
NZ_CAAR01000168.1	RefSeq	pseudogene	2656	2876	.	-	.	ID=gene-STY7866_RS06410;Name=STY7866_RS06410;end_range=2876,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS06410;partial=true;pseudo=true
NZ_CAAR01000168.1	Protein Homology	CDS	2656	2876	.	-	2	ID=cds-STY7866_RS06410;Parent=gene-STY7866_RS06410;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2876,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456682.1;locus_tag=STY7866_RS06410;partial=true;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000167.1 1 8444
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000167.1	RefSeq	region	1	8444	.	+	.	ID=NZ_CAAR01000167.1:1..8444;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000167.1	RefSeq	gene	1	715	.	+	.	ID=gene-STY7866_RS06320;Name=STY7866_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06320;partial=true;start_range=.,1
NZ_CAAR01000167.1	Protein Homology	CDS	1	715	.	+	1	ID=cds-WP_000314347.1;Parent=gene-STY7866_RS06320;Dbxref=Genbank:WP_000314347.1;Name=WP_000314347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456325.1;locus_tag=STY7866_RS06320;partial=true;product=AMP-binding protein;protein_id=WP_000314347.1;start_range=.,1;transl_table=11
NZ_CAAR01000167.1	RefSeq	gene	788	1915	.	+	.	ID=gene-STY7866_RS06325;Name=STY7866_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06325
NZ_CAAR01000167.1	Protein Homology	CDS	788	1915	.	+	0	ID=cds-WP_001109129.1;Parent=gene-STY7866_RS06325;Dbxref=Genbank:WP_001109129.1;Name=WP_001109129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456324.1;locus_tag=STY7866_RS06325;product=ribonuclease D;protein_id=WP_001109129.1;transl_table=11
NZ_CAAR01000167.1	RefSeq	gene	2037	2303	.	-	.	ID=gene-STY7866_RS06330;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=STY7866_RS06330
NZ_CAAR01000167.1	Protein Homology	CDS	2037	2303	.	-	0	ID=cds-WP_001185666.1;Parent=gene-STY7866_RS06330;Dbxref=Genbank:WP_001185666.1;Name=WP_001185666.1;gbkey=CDS;gene=minE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456323.1;locus_tag=STY7866_RS06330;product=cell division topological specificity factor MinE;protein_id=WP_001185666.1;transl_table=11
NZ_CAAR01000167.1	RefSeq	gene	2307	3119	.	-	.	ID=gene-STY7866_RS06335;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=STY7866_RS06335
NZ_CAAR01000167.1	Protein Homology	CDS	2307	3119	.	-	0	ID=cds-WP_000101048.1;Parent=gene-STY7866_RS06335;Dbxref=Genbank:WP_000101048.1;Name=WP_000101048.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=STY7866_RS06335;product=septum site-determining protein MinD;protein_id=WP_000101048.1;transl_table=11
NZ_CAAR01000167.1	RefSeq	gene	3143	3850	.	-	.	ID=gene-STY7866_RS06340;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=STY7866_RS06340
NZ_CAAR01000167.1	Protein Homology	CDS	3143	3850	.	-	0	ID=cds-WP_000072527.1;Parent=gene-STY7866_RS06340;Dbxref=Genbank:WP_000072527.1;Name=WP_000072527.1;gbkey=CDS;gene=minC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456321.1;locus_tag=STY7866_RS06340;product=septum site-determining protein MinC;protein_id=WP_000072527.1;transl_table=11
NZ_CAAR01000167.1	RefSeq	gene	3976	4269	.	+	.	ID=gene-STY7866_RS06345;Name=STY7866_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06345
NZ_CAAR01000167.1	Protein Homology	CDS	3976	4269	.	+	0	ID=cds-WP_001763996.1;Parent=gene-STY7866_RS06345;Dbxref=Genbank:WP_001763996.1;Name=WP_001763996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020949.1;locus_tag=STY7866_RS06345;product=hypothetical protein;protein_id=WP_001763996.1;transl_table=11
NZ_CAAR01000167.1	RefSeq	gene	4319	4978	.	+	.	ID=gene-STY7866_RS06350;Name=STY7866_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06350
NZ_CAAR01000167.1	Protein Homology	CDS	4319	4978	.	+	0	ID=cds-WP_001519895.1;Parent=gene-STY7866_RS06350;Dbxref=Genbank:WP_001519895.1;Name=WP_001519895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456319.1;locus_tag=STY7866_RS06350;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_001519895.1;transl_table=11
NZ_CAAR01000167.1	RefSeq	gene	5056	5517	.	+	.	ID=gene-STY7866_RS06355;Name=STY7866_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06355
NZ_CAAR01000167.1	Protein Homology	CDS	5056	5517	.	+	0	ID=cds-WP_000785858.1;Parent=gene-STY7866_RS06355;Dbxref=Genbank:WP_000785858.1;Name=WP_000785858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456318.3;locus_tag=STY7866_RS06355;product=YcgN family cysteine cluster protein;protein_id=WP_000785858.1;transl_table=11
NZ_CAAR01000167.1	RefSeq	gene	5869	6006	.	+	.	ID=gene-STY7866_RS06365;Name=STY7866_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06365
NZ_CAAR01000167.1	Protein Homology	CDS	5869	6006	.	+	0	ID=cds-WP_001519337.1;Parent=gene-STY7866_RS06365;Dbxref=Genbank:WP_001519337.1;Name=WP_001519337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=STY7866_RS06365;product=hypothetical protein;protein_id=WP_001519337.1;transl_table=11
NZ_CAAR01000167.1	RefSeq	gene	6198	6371	.	+	.	ID=gene-STY7866_RS06370;Name=STY7866_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06370
NZ_CAAR01000167.1	Protein Homology	CDS	6198	6371	.	+	0	ID=cds-WP_001083582.1;Parent=gene-STY7866_RS06370;Dbxref=Genbank:WP_001083582.1;Name=WP_001083582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456316.1;locus_tag=STY7866_RS06370;product=addiction module toxin%2C GnsA/GnsB family;protein_id=WP_001083582.1;transl_table=11
NZ_CAAR01000167.1	RefSeq	gene	6443	6784	.	-	.	ID=gene-STY7866_RS06375;Name=STY7866_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06375
NZ_CAAR01000167.1	Protein Homology	CDS	6443	6784	.	-	0	ID=cds-WP_000018971.1;Parent=gene-STY7866_RS06375;Dbxref=Genbank:WP_000018971.1;Name=WP_000018971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456315.1;locus_tag=STY7866_RS06375;product=DUF1971 domain-containing protein;protein_id=WP_000018971.1;transl_table=11
NZ_CAAR01000167.1	RefSeq	gene	6892	7422	.	-	.	ID=gene-STY7866_RS06380;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=STY7866_RS06380
NZ_CAAR01000167.1	Protein Homology	CDS	6892	7422	.	-	0	ID=cds-WP_000943475.1;Parent=gene-STY7866_RS06380;Dbxref=Genbank:WP_000943475.1;Name=WP_000943475.1;gbkey=CDS;gene=dsbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456314.1;locus_tag=STY7866_RS06380;product=disulfide bond formation protein DsbB;protein_id=WP_000943475.1;transl_table=11
NZ_CAAR01000167.1	RefSeq	pseudogene	7564	8444	.	-	.	ID=gene-STY7866_RS06385;Name=STY7866_RS06385;end_range=8444,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS06385;partial=true;pseudo=true
NZ_CAAR01000167.1	Protein Homology	CDS	7564	8444	.	-	0	ID=cds-STY7866_RS06385;Parent=gene-STY7866_RS06385;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=8444,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456313.1;locus_tag=STY7866_RS06385;partial=true;product=sodium/proton antiporter;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000166.1 1 8958
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000166.1	RefSeq	region	1	8958	.	+	.	ID=NZ_CAAR01000166.1:1..8958;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000166.1	RefSeq	pseudogene	1	1094	.	+	.	ID=gene-STY7866_RS06265;Name=STY7866_RS06265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS06265;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000166.1	Protein Homology	CDS	1	1094	.	+	2	ID=cds-STY7866_RS06265;Parent=gene-STY7866_RS06265;Note=Catalyzes the conversion of citrate to isocitrate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455785.1;locus_tag=STY7866_RS06265;partial=true;product=aconitate hydratase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000166.1	RefSeq	gene	1150	1740	.	-	.	ID=gene-STY7866_RS06270;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=STY7866_RS06270
NZ_CAAR01000166.1	Protein Homology	CDS	1150	1740	.	-	0	ID=cds-WP_001176284.1;Parent=gene-STY7866_RS06270;Dbxref=Genbank:WP_001176284.1;Name=WP_001176284.1;gbkey=CDS;gene=ribA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455786.1;locus_tag=STY7866_RS06270;product=GTP cyclohydrolase II;protein_id=WP_001176284.1;transl_table=11
NZ_CAAR01000166.1	RefSeq	gene	1936	2700	.	+	.	ID=gene-STY7866_RS06275;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=STY7866_RS06275
NZ_CAAR01000166.1	Protein Homology	CDS	1936	2700	.	+	0	ID=cds-WP_000948651.1;Parent=gene-STY7866_RS06275;Dbxref=Genbank:WP_000948651.1;Name=WP_000948651.1;gbkey=CDS;gene=pgpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455787.1;locus_tag=STY7866_RS06275;product=phosphatidylglycerophosphatase B;protein_id=WP_000948651.1;transl_table=11
NZ_CAAR01000166.1	RefSeq	gene	2850	3158	.	+	.	ID=gene-STY7866_RS06280;Name=STY7866_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06280
NZ_CAAR01000166.1	Protein Homology	CDS	2850	3158	.	+	0	ID=cds-WP_000876301.1;Parent=gene-STY7866_RS06280;Dbxref=Genbank:WP_000876301.1;Name=WP_000876301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455788.1;locus_tag=STY7866_RS06280;product=LapA family protein;protein_id=WP_000876301.1;transl_table=11
NZ_CAAR01000166.1	RefSeq	gene	3165	4334	.	+	.	ID=gene-STY7866_RS06285;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=STY7866_RS06285
NZ_CAAR01000166.1	Protein Homology	CDS	3165	4334	.	+	0	ID=cds-WP_000891378.1;Parent=gene-STY7866_RS06285;Dbxref=Genbank:WP_000891378.1;Name=WP_000891378.1;gbkey=CDS;gene=lapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=STY7866_RS06285;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891378.1;transl_table=11
NZ_CAAR01000166.1	RefSeq	gene	4524	5261	.	+	.	ID=gene-STY7866_RS06290;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=STY7866_RS06290
NZ_CAAR01000166.1	Protein Homology	CDS	4524	5261	.	+	0	ID=cds-WP_001763993.1;Parent=gene-STY7866_RS06290;Dbxref=Genbank:WP_001763993.1;Name=WP_001763993.1;gbkey=CDS;gene=pyrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455790.1;locus_tag=STY7866_RS06290;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_001763993.1;transl_table=11
NZ_CAAR01000166.1	RefSeq	gene	5261	5587	.	+	.	ID=gene-STY7866_RS06295;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=STY7866_RS06295
NZ_CAAR01000166.1	Protein Homology	CDS	5261	5587	.	+	0	ID=cds-WP_001285199.1;Parent=gene-STY7866_RS06295;Dbxref=Genbank:WP_001285199.1;Name=WP_001285199.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455791.1;locus_tag=STY7866_RS06295;product=stress response translation initiation inhibitor YciH;protein_id=WP_001285199.1;transl_table=11
NZ_CAAR01000166.1	RefSeq	pseudogene	5707	5924	.	-	.	ID=gene-STY7866_RS06300;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=pseudogene;locus_tag=STY7866_RS06300;pseudo=true
NZ_CAAR01000166.1	Protein Homology	CDS	5707	5924	.	-	0	ID=cds-STY7866_RS06300;Parent=gene-STY7866_RS06300;Note=frameshifted;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455792.1;locus_tag=STY7866_RS06300;product=osmotically-inducible lipoprotein OsmB;pseudo=true;transl_table=11
NZ_CAAR01000166.1	RefSeq	gene	6185	6937	.	-	.	ID=gene-STY7866_RS06305;Name=STY7866_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06305
NZ_CAAR01000166.1	Protein Homology	CDS	6185	6937	.	-	0	ID=cds-WP_001088593.1;Parent=gene-STY7866_RS06305;Dbxref=Genbank:WP_001088593.1;Name=WP_001088593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455793.1;locus_tag=STY7866_RS06305;product=DeoR/GlpR transcriptional regulator;protein_id=WP_001088593.1;transl_table=11
NZ_CAAR01000166.1	RefSeq	gene	7024	7203	.	-	.	ID=gene-STY7866_RS06310;Name=STY7866_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06310
NZ_CAAR01000166.1	Protein Homology	CDS	7024	7203	.	-	0	ID=cds-WP_001279854.1;Parent=gene-STY7866_RS06310;Dbxref=Genbank:WP_001279854.1;Name=WP_001279854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=STY7866_RS06310;product=hypothetical protein;protein_id=WP_001279854.1;transl_table=11
NZ_CAAR01000166.1	RefSeq	gene	7325	8958	.	-	.	ID=gene-STY7866_RS06315;Name=pdeR;end_range=8958,.;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=STY7866_RS06315;partial=true
NZ_CAAR01000166.1	Protein Homology	CDS	7325	8958	.	-	2	ID=cds-WP_000295134.1;Parent=gene-STY7866_RS06315;Dbxref=Genbank:WP_000295134.1;Name=WP_000295134.1;end_range=8958,.;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455794.1;locus_tag=STY7866_RS06315;partial=true;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000295134.1;transl_table=11
##sequence-region NZ_CAAR01000165.1 1 678
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000165.1	RefSeq	region	1	678	.	+	.	ID=NZ_CAAR01000165.1:1..678;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000165.1	RefSeq	pseudogene	1	678	.	+	.	ID=gene-STY7866_RS06260;Name=STY7866_RS06260;end_range=678,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS06260;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000165.1	Protein Homology	CDS	1	678	.	+	2	ID=cds-STY7866_RS06260;Parent=gene-STY7866_RS06260;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=678,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454914.1;locus_tag=STY7866_RS06260;partial=true;product=fimbrial assembly protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000164.1 1 5567
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000164.1	RefSeq	region	1	5567	.	+	.	ID=NZ_CAAR01000164.1:1..5567;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000164.1	RefSeq	pseudogene	509	3107	.	+	.	ID=gene-STY7866_RS06240;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=pseudogene;locus_tag=STY7866_RS06240;pseudo=true
NZ_CAAR01000164.1	Protein Homology	CDS	509	3107	.	+	0	ID=cds-STY7866_RS06240;Parent=gene-STY7866_RS06240;Note=frameshifted;gbkey=CDS;gene=acnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454772.1;locus_tag=STY7866_RS06240;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;pseudo=true;transl_table=11
NZ_CAAR01000164.1	RefSeq	gene	3295	3657	.	+	.	ID=gene-STY7866_RS06245;Name=STY7866_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06245
NZ_CAAR01000164.1	Protein Homology	CDS	3295	3657	.	+	0	ID=cds-WP_000384314.1;Parent=gene-STY7866_RS06245;Dbxref=Genbank:WP_000384314.1;Name=WP_000384314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454773.1;locus_tag=STY7866_RS06245;product=YacL family protein;protein_id=WP_000384314.1;transl_table=11
NZ_CAAR01000164.1	RefSeq	gene	3892	4845	.	+	.	ID=gene-STY7866_RS06250;Name=STY7866_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06250
NZ_CAAR01000164.1	Protein Homology	CDS	3892	4845	.	+	0	ID=cds-WP_001022089.1;Parent=gene-STY7866_RS06250;Dbxref=Genbank:WP_001022089.1;Name=WP_001022089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454774.1;locus_tag=STY7866_RS06250;product=2-keto-3-deoxygluconate permease 1;protein_id=WP_001022089.1;transl_table=11
NZ_CAAR01000164.1	RefSeq	pseudogene	4842	5567	.	+	.	ID=gene-STY7866_RS06255;Name=STY7866_RS06255;end_range=5567,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS06255;partial=true;pseudo=true
NZ_CAAR01000164.1	Protein Homology	CDS	4842	5567	.	+	0	ID=cds-STY7866_RS06255;Parent=gene-STY7866_RS06255;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5567,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454775.1;locus_tag=STY7866_RS06255;partial=true;product=D-threonate kinase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000163.1 1 1710
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000163.1	RefSeq	region	1	1710	.	+	.	ID=NZ_CAAR01000163.1:1..1710;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000163.1	RefSeq	pseudogene	1	297	.	+	.	ID=gene-STY7866_RS06220;Name=STY7866_RS06220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS06220;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000163.1	Protein Homology	CDS	1	297	.	+	0	ID=cds-STY7866_RS06220;Parent=gene-STY7866_RS06220;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458930.1;locus_tag=STY7866_RS06220;partial=true;product=dienelactone hydrolase family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000163.1	RefSeq	gene	314	775	.	-	.	ID=gene-STY7866_RS06225;Name=STY7866_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06225
NZ_CAAR01000163.1	Protein Homology	CDS	314	775	.	-	0	ID=cds-WP_001796324.1;Parent=gene-STY7866_RS06225;Dbxref=Genbank:WP_001796324.1;Name=WP_001796324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458929.1;locus_tag=STY7866_RS06225;product=DUF302 domain-containing protein;protein_id=WP_001796324.1;transl_table=11
NZ_CAAR01000163.1	RefSeq	gene	986	1710	.	-	.	ID=gene-STY7866_RS06230;Name=STY7866_RS06230;end_range=1710,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06230;partial=true
NZ_CAAR01000163.1	Protein Homology	CDS	986	1710	.	-	2	ID=cds-WP_000317951.1;Parent=gene-STY7866_RS06230;Dbxref=Genbank:WP_000317951.1;Name=WP_000317951.1;end_range=1710,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458928.1;locus_tag=STY7866_RS06230;partial=true;product=hypothetical protein;protein_id=WP_000317951.1;transl_table=11
##sequence-region NZ_CAAR01000162.1 1 4001
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000162.1	RefSeq	region	1	4001	.	+	.	ID=NZ_CAAR01000162.1:1..4001;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000162.1	RefSeq	pseudogene	65	848	.	+	.	ID=gene-STY7866_RS06195;Name=STY7866_RS06195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS06195;pseudo=true
NZ_CAAR01000162.1	Protein Homology	CDS	65	848	.	+	0	ID=cds-STY7866_RS06195;Parent=gene-STY7866_RS06195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457148.1;locus_tag=STY7866_RS06195;product=inner membrane protein YpjD;pseudo=true;transl_table=11
NZ_CAAR01000162.1	RefSeq	gene	868	2154	.	+	.	ID=gene-STY7866_RS06200;Name=STY7866_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06200
NZ_CAAR01000162.1	Protein Homology	CDS	868	2154	.	+	0	ID=cds-WP_127172650.1;Parent=gene-STY7866_RS06200;Dbxref=Genbank:WP_127172650.1;Name=WP_127172650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=STY7866_RS06200;product=HlyC/CorC family transporter;protein_id=WP_127172650.1;transl_table=11
NZ_CAAR01000162.1	RefSeq	gene	2275	2832	.	+	.	ID=gene-STY7866_RS06205;Name=STY7866_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06205
NZ_CAAR01000162.1	Protein Homology	CDS	2275	2832	.	+	0	ID=cds-WP_001682111.1;Parent=gene-STY7866_RS06205;Dbxref=Genbank:WP_001682111.1;Name=WP_001682111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001688360.1;locus_tag=STY7866_RS06205;product=hypothetical protein;protein_id=WP_001682111.1;transl_table=11
NZ_CAAR01000162.1	RefSeq	gene	2914	3504	.	-	.	ID=gene-STY7866_RS06210;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=STY7866_RS06210
NZ_CAAR01000162.1	Protein Homology	CDS	2914	3504	.	-	0	ID=cds-WP_001518875.1;Parent=gene-STY7866_RS06210;Dbxref=Genbank:WP_001518875.1;Name=WP_001518875.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457151.1;locus_tag=STY7866_RS06210;product=nucleotide exchange factor GrpE;protein_id=WP_001518875.1;transl_table=11
NZ_CAAR01000162.1	RefSeq	pseudogene	3628	4001	.	+	.	ID=gene-STY7866_RS06215;Name=ppnK;end_range=4001,.;gbkey=Gene;gene=ppnK;gene_biotype=pseudogene;locus_tag=STY7866_RS06215;partial=true;pseudo=true
NZ_CAAR01000162.1	Protein Homology	CDS	3628	4001	.	+	0	ID=cds-STY7866_RS06215;Parent=gene-STY7866_RS06215;Note=catalyzes the phosphorylation of NAD to NADP%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4001,.;gbkey=CDS;gene=ppnK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=STY7866_RS06215;partial=true;product=NAD(+) kinase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000161.1 1 8283
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000161.1	RefSeq	region	1	8283	.	+	.	ID=NZ_CAAR01000161.1:1..8283;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000161.1	RefSeq	gene	1	699	.	+	.	ID=gene-STY7866_RS06135;Name=STY7866_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06135
NZ_CAAR01000161.1	Protein Homology	CDS	1	699	.	+	0	ID=cds-WP_031626195.1;Parent=gene-STY7866_RS06135;Dbxref=Genbank:WP_031626195.1;Name=WP_031626195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456894.1;locus_tag=STY7866_RS06135;product=ABC transporter permease;protein_id=WP_031626195.1;transl_table=11
NZ_CAAR01000161.1	RefSeq	gene	713	1486	.	+	.	ID=gene-STY7866_RS06140;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=STY7866_RS06140
NZ_CAAR01000161.1	Protein Homology	CDS	713	1486	.	+	0	ID=cds-WP_001763985.1;Parent=gene-STY7866_RS06140;Dbxref=Genbank:WP_001763985.1;Name=WP_001763985.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=STY7866_RS06140;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001763985.1;transl_table=11
NZ_CAAR01000161.1	RefSeq	gene	1538	2431	.	-	.	ID=gene-STY7866_RS06145;Name=STY7866_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06145
NZ_CAAR01000161.1	Protein Homology	CDS	1538	2431	.	-	0	ID=cds-WP_001166265.1;Parent=gene-STY7866_RS06145;Dbxref=Genbank:WP_001166265.1;Name=WP_001166265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456892.1;locus_tag=STY7866_RS06145;product=TIGR01777 family protein;protein_id=WP_001166265.1;transl_table=11
NZ_CAAR01000161.1	RefSeq	gene	2555	3202	.	-	.	ID=gene-STY7866_RS06150;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=STY7866_RS06150
NZ_CAAR01000161.1	Protein Homology	CDS	2555	3202	.	-	0	ID=cds-WP_000566559.1;Parent=gene-STY7866_RS06150;Dbxref=Genbank:WP_000566559.1;Name=WP_000566559.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456891.1;locus_tag=STY7866_RS06150;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566559.1;transl_table=11
NZ_CAAR01000161.1	RefSeq	gene	3345	3989	.	+	.	ID=gene-STY7866_RS06155;Name=STY7866_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06155
NZ_CAAR01000161.1	Protein Homology	CDS	3345	3989	.	+	0	ID=cds-WP_000043013.1;Parent=gene-STY7866_RS06155;Dbxref=Genbank:WP_000043013.1;Name=WP_000043013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456890.1;locus_tag=STY7866_RS06155;product=glutathione transferase;protein_id=WP_000043013.1;transl_table=11
NZ_CAAR01000161.1	RefSeq	gene	4045	4596	.	+	.	ID=gene-STY7866_RS06160;Name=STY7866_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06160
NZ_CAAR01000161.1	Protein Homology	CDS	4045	4596	.	+	0	ID=cds-WP_000772458.1;Parent=gene-STY7866_RS06160;Dbxref=Genbank:WP_000772458.1;Name=WP_000772458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456889.1;locus_tag=STY7866_RS06160;product=phosphodiesterase;protein_id=WP_000772458.1;transl_table=11
NZ_CAAR01000161.1	RefSeq	gene	4653	5207	.	+	.	ID=gene-STY7866_RS06165;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=STY7866_RS06165
NZ_CAAR01000161.1	Protein Homology	CDS	4653	5207	.	+	0	ID=cds-WP_000230215.1;Parent=gene-STY7866_RS06165;Dbxref=Genbank:WP_000230215.1;Name=WP_000230215.1;gbkey=CDS;gene=yfcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456888.1;locus_tag=STY7866_RS06165;product=NUDIX hydrolase YfcD;protein_id=WP_000230215.1;transl_table=11
NZ_CAAR01000161.1	RefSeq	gene	5213	6232	.	-	.	ID=gene-STY7866_RS06170;Name=STY7866_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06170
NZ_CAAR01000161.1	Protein Homology	CDS	5213	6232	.	-	0	ID=cds-WP_000026949.1;Parent=gene-STY7866_RS06170;Dbxref=Genbank:WP_000026949.1;Name=WP_000026949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=STY7866_RS06170;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000026949.1;transl_table=11
NZ_CAAR01000161.1	RefSeq	gene	6485	6928	.	+	.	ID=gene-STY7866_RS06180;Name=STY7866_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06180
NZ_CAAR01000161.1	Protein Homology	CDS	6485	6928	.	+	0	ID=cds-WP_000901818.1;Parent=gene-STY7866_RS06180;Dbxref=Genbank:WP_000901818.1;Name=WP_000901818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456886.1;locus_tag=STY7866_RS06180;product=PTS sugar transporter subunit IIA;protein_id=WP_000901818.1;transl_table=11
NZ_CAAR01000161.1	RefSeq	gene	7009	7281	.	+	.	ID=gene-STY7866_RS06185;Name=STY7866_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06185
NZ_CAAR01000161.1	Protein Homology	CDS	7009	7281	.	+	0	ID=cds-WP_000699818.1;Parent=gene-STY7866_RS06185;Dbxref=Genbank:WP_000699818.1;Name=WP_000699818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456885.1;locus_tag=STY7866_RS06185;product=PTS sugar transporter subunit IIB;protein_id=WP_000699818.1;transl_table=11
NZ_CAAR01000161.1	RefSeq	gene	7302	8283	.	+	.	ID=gene-STY7866_RS06190;Name=STY7866_RS06190;end_range=8283,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06190;partial=true
NZ_CAAR01000161.1	Protein Homology	CDS	7302	8283	.	+	0	ID=cds-WP_000470231.1;Parent=gene-STY7866_RS06190;Dbxref=Genbank:WP_000470231.1;Name=WP_000470231.1;end_range=8283,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456884.3;locus_tag=STY7866_RS06190;partial=true;product=PTS sugar transporter subunit IIC;protein_id=WP_000470231.1;transl_table=11
##sequence-region NZ_CAAR01000160.1 1 9429
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000160.1	RefSeq	region	1	9429	.	+	.	ID=NZ_CAAR01000160.1:1..9429;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000160.1	RefSeq	pseudogene	298	1670	.	+	.	ID=gene-STY7866_RS06090;Name=STY7866_RS06090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS06090;pseudo=true
NZ_CAAR01000160.1	Protein Homology	CDS	298	1670	.	+	0	ID=cds-STY7866_RS06090;Parent=gene-STY7866_RS06090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=STY7866_RS06090;product=NAD-dependent succinate-semialdehyde dehydrogenase;pseudo=true;transl_table=11
NZ_CAAR01000160.1	RefSeq	gene	1766	1909	.	-	.	ID=gene-STY7866_RS06095;Name=STY7866_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06095
NZ_CAAR01000160.1	Protein Homology	CDS	1766	1909	.	-	0	ID=cds-WP_010989318.1;Parent=gene-STY7866_RS06095;Dbxref=Genbank:WP_010989318.1;Name=WP_010989318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=STY7866_RS06095;product=hypothetical protein;protein_id=WP_010989318.1;transl_table=11
NZ_CAAR01000160.1	RefSeq	gene	1876	2040	.	+	.	ID=gene-STY7866_RS06105;Name=STY7866_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06105
NZ_CAAR01000160.1	Protein Homology	CDS	1876	2040	.	+	0	ID=cds-WP_000397918.1;Parent=gene-STY7866_RS06105;Dbxref=Genbank:WP_000397918.1;Name=WP_000397918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=STY7866_RS06105;product=DUF1127 domain-containing protein;protein_id=WP_000397918.1;transl_table=11
NZ_CAAR01000160.1	RefSeq	gene	2115	2816	.	-	.	ID=gene-STY7866_RS06110;Name=STY7866_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06110
NZ_CAAR01000160.1	Protein Homology	CDS	2115	2816	.	-	0	ID=cds-WP_001237614.1;Parent=gene-STY7866_RS06110;Dbxref=Genbank:WP_001237614.1;Name=WP_001237614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463381.1;locus_tag=STY7866_RS06110;product=hypothetical protein;protein_id=WP_001237614.1;transl_table=11
NZ_CAAR01000160.1	RefSeq	gene	2890	3222	.	-	.	ID=gene-STY7866_RS06115;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=STY7866_RS06115
NZ_CAAR01000160.1	Protein Homology	CDS	2890	3222	.	-	0	ID=cds-WP_001681523.1;Parent=gene-STY7866_RS06115;Dbxref=Genbank:WP_001681523.1;Name=WP_001681523.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463382.1;locus_tag=STY7866_RS06115;product=endoribonuclease SymE;protein_id=WP_001681523.1;transl_table=11
NZ_CAAR01000160.1	RefSeq	gene	3450	4838	.	-	.	ID=gene-STY7866_RS06120;Name=hsdS;gbkey=Gene;gene=hsdS;gene_biotype=protein_coding;locus_tag=STY7866_RS06120
NZ_CAAR01000160.1	Protein Homology	CDS	3450	4838	.	-	0	ID=cds-WP_000014003.1;Parent=gene-STY7866_RS06120;Dbxref=Genbank:WP_000014003.1;Name=WP_000014003.1;gbkey=CDS;gene=hsdS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458948.1;locus_tag=STY7866_RS06120;product=type I restriction-modification system specificity subunit;protein_id=WP_000014003.1;transl_table=11
NZ_CAAR01000160.1	RefSeq	gene	5024	6421	.	-	.	ID=gene-STY7866_RS06125;Name=STY7866_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06125
NZ_CAAR01000160.1	Protein Homology	CDS	5024	6421	.	-	0	ID=cds-WP_001063188.1;Parent=gene-STY7866_RS06125;Dbxref=Genbank:WP_001063188.1;Name=WP_001063188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001063188.1;locus_tag=STY7866_RS06125;product=type I restriction-modification system subunit M;protein_id=WP_001063188.1;transl_table=11
NZ_CAAR01000160.1	RefSeq	gene	6579	9429	.	-	.	ID=gene-STY7866_RS06130;Name=hsdR;end_range=9429,.;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=STY7866_RS06130;partial=true
NZ_CAAR01000160.1	Protein Homology	CDS	6579	9429	.	-	1	ID=cds-WP_000317353.1;Parent=gene-STY7866_RS06130;Dbxref=Genbank:WP_000317353.1;Name=WP_000317353.1;end_range=9429,.;gbkey=CDS;gene=hsdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458949.1;locus_tag=STY7866_RS06130;partial=true;product=type I restriction-modification system endonuclease;protein_id=WP_000317353.1;transl_table=11
##sequence-region NZ_CAAR01000159.1 1 1007
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000159.1	RefSeq	region	1	1007	.	+	.	ID=NZ_CAAR01000159.1:1..1007;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000159.1	RefSeq	gene	1	478	.	+	.	ID=gene-STY7866_RS06070;Name=STY7866_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06070;partial=true;start_range=.,1
NZ_CAAR01000159.1	Protein Homology	CDS	1	478	.	+	1	ID=cds-WP_000663160.1;Parent=gene-STY7866_RS06070;Dbxref=Genbank:WP_000663160.1;Name=WP_000663160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456581.1;locus_tag=STY7866_RS06070;partial=true;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_000663160.1;start_range=.,1;transl_table=11
NZ_CAAR01000159.1	RefSeq	gene	462	1007	.	+	.	ID=gene-STY7866_RS06075;Name=cbiF;end_range=1007,.;gbkey=Gene;gene=cbiF;gene_biotype=protein_coding;locus_tag=STY7866_RS06075;partial=true
NZ_CAAR01000159.1	Protein Homology	CDS	462	1007	.	+	0	ID=cds-WP_000004865.1;Parent=gene-STY7866_RS06075;Dbxref=Genbank:WP_000004865.1;Name=WP_000004865.1;Note=catalyzes the formation of cobalt-precorrin-5 from cobalt-precorrin-4;end_range=1007,.;gbkey=CDS;gene=cbiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456580.1;locus_tag=STY7866_RS06075;partial=true;product=cobalt-precorrin-4 C(11)-methyltransferase;protein_id=WP_000004865.1;transl_table=11
##sequence-region NZ_CAAR01000158.1 1 4591
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000158.1	RefSeq	region	1	4591	.	+	.	ID=NZ_CAAR01000158.1:1..4591;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000158.1	RefSeq	pseudogene	1	681	.	+	.	ID=gene-STY7866_RS06035;Name=STY7866_RS06035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS06035;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000158.1	Protein Homology	CDS	1	681	.	+	0	ID=cds-STY7866_RS06035;Parent=gene-STY7866_RS06035;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors%3B internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=STY7866_RS06035;partial=true;product=serine-type D-Ala-D-Ala carboxypeptidase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000158.1	RefSeq	gene	832	1299	.	+	.	ID=gene-STY7866_RS06045;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=STY7866_RS06045
NZ_CAAR01000158.1	Protein Homology	CDS	832	1299	.	+	0	ID=cds-WP_000384326.1;Parent=gene-STY7866_RS06045;Dbxref=Genbank:WP_000384326.1;Name=WP_000384326.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456610.1;locus_tag=STY7866_RS06045;product=DNA gyrase inhibitor SbmC;protein_id=WP_000384326.1;transl_table=11
NZ_CAAR01000158.1	RefSeq	gene	1418	2476	.	+	.	ID=gene-STY7866_RS06050;Name=STY7866_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06050
NZ_CAAR01000158.1	Protein Homology	CDS	1418	2476	.	+	0	ID=cds-WP_001200856.1;Parent=gene-STY7866_RS06050;Dbxref=Genbank:WP_001200856.1;Name=WP_001200856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456609.1;locus_tag=STY7866_RS06050;product=FUSC family protein;protein_id=WP_001200856.1;transl_table=11
NZ_CAAR01000158.1	RefSeq	gene	2721	3056	.	+	.	ID=gene-STY7866_RS06055;Name=STY7866_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS06055
NZ_CAAR01000158.1	Protein Homology	CDS	2721	3056	.	+	0	ID=cds-WP_000450405.1;Parent=gene-STY7866_RS06055;Dbxref=Genbank:WP_000450405.1;Name=WP_000450405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456608.1;locus_tag=STY7866_RS06055;product=DUF496 family protein;protein_id=WP_000450405.1;transl_table=11
NZ_CAAR01000158.1	RefSeq	gene	3090	3956	.	-	.	ID=gene-STY7866_RS06060;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=STY7866_RS06060
NZ_CAAR01000158.1	Protein Homology	CDS	3090	3956	.	-	0	ID=cds-WP_001808089.1;Parent=gene-STY7866_RS06060;Dbxref=Genbank:WP_001808089.1;Name=WP_001808089.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=STY7866_RS06060;product=L-threonine kinase PduX;protein_id=WP_001808089.1;transl_table=11
NZ_CAAR01000158.1	RefSeq	pseudogene	4050	4591	.	-	.	ID=gene-STY7866_RS06065;Name=pduW;end_range=4591,.;gbkey=Gene;gene=pduW;gene_biotype=pseudogene;locus_tag=STY7866_RS06065;partial=true;pseudo=true
NZ_CAAR01000158.1	Protein Homology	CDS	4050	4591	.	-	2	ID=cds-STY7866_RS06065;Parent=gene-STY7866_RS06065;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4591,.;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456606.1;locus_tag=STY7866_RS06065;partial=true;product=propanediol utilization propionate kinase PduW;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000157.1 1 8080
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000157.1	RefSeq	region	1	8080	.	+	.	ID=NZ_CAAR01000157.1:1..8080;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000157.1	RefSeq	pseudogene	1	399	.	+	.	ID=gene-STY7866_RS05980;Name=STY7866_RS05980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS05980;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000157.1	Protein Homology	CDS	1	399	.	+	0	ID=cds-STY7866_RS05980;Parent=gene-STY7866_RS05980;Note=catalyzes the formation of propionyl phosphate from propionyl-CoA in propanediol degradation%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456597.1;locus_tag=STY7866_RS05980;partial=true;product=propanediol utilization protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000157.1	RefSeq	gene	396	887	.	+	.	ID=gene-STY7866_RS05985;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=STY7866_RS05985
NZ_CAAR01000157.1	Protein Homology	CDS	396	887	.	+	0	ID=cds-WP_001012961.1;Parent=gene-STY7866_RS05985;Dbxref=Genbank:WP_001012961.1;Name=WP_001012961.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456598.1;locus_tag=STY7866_RS05985;product=propanediol utilization microcompartment protein PduM;protein_id=WP_001012961.1;transl_table=11
NZ_CAAR01000157.1	RefSeq	pseudogene	891	1165	.	+	.	ID=gene-STY7866_RS05990;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=pseudogene;locus_tag=STY7866_RS05990;pseudo=true
NZ_CAAR01000157.1	Protein Homology	CDS	891	1165	.	+	0	ID=cds-STY7866_RS05990;Parent=gene-STY7866_RS05990;Note=frameshifted;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000549825.1;locus_tag=STY7866_RS05990;product=propanediol utilization microcompartment protein PduN;pseudo=true;transl_table=11
NZ_CAAR01000157.1	RefSeq	gene	1175	2185	.	+	.	ID=gene-STY7866_RS05995;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=STY7866_RS05995
NZ_CAAR01000157.1	Protein Homology	CDS	1175	2185	.	+	0	ID=cds-WP_001029486.1;Parent=gene-STY7866_RS05995;Dbxref=Genbank:WP_001029486.1;Name=WP_001029486.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456599.1;locus_tag=STY7866_RS05995;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_001029486.1;transl_table=11
NZ_CAAR01000157.1	RefSeq	gene	2182	3576	.	+	.	ID=gene-STY7866_RS06000;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=STY7866_RS06000
NZ_CAAR01000157.1	Protein Homology	CDS	2182	3576	.	+	0	ID=cds-WP_001097666.1;Parent=gene-STY7866_RS06000;Dbxref=Genbank:WP_001097666.1;Name=WP_001097666.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456600.1;locus_tag=STY7866_RS06000;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_001097666.1;transl_table=11
NZ_CAAR01000157.1	RefSeq	gene	3588	4700	.	+	.	ID=gene-STY7866_RS06005;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=STY7866_RS06005
NZ_CAAR01000157.1	Protein Homology	CDS	3588	4700	.	+	0	ID=cds-WP_001091449.1;Parent=gene-STY7866_RS06005;Dbxref=Genbank:WP_001091449.1;Name=WP_001091449.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456601.1;locus_tag=STY7866_RS06005;product=1-propanol dehydrogenase PduQ;protein_id=WP_001091449.1;transl_table=11
NZ_CAAR01000157.1	RefSeq	gene	4724	6052	.	+	.	ID=gene-STY7866_RS06010;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=STY7866_RS06010
NZ_CAAR01000157.1	Protein Homology	CDS	4724	6052	.	+	0	ID=cds-WP_000058762.1;Parent=gene-STY7866_RS06010;Dbxref=Genbank:WP_000058762.1;Name=WP_000058762.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456602.1;locus_tag=STY7866_RS06010;product=cobalamin reductase PduS;protein_id=WP_000058762.1;transl_table=11
NZ_CAAR01000157.1	RefSeq	gene	6055	6609	.	+	.	ID=gene-STY7866_RS06015;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=STY7866_RS06015
NZ_CAAR01000157.1	Protein Homology	CDS	6055	6609	.	+	0	ID=cds-WP_000075775.1;Parent=gene-STY7866_RS06015;Dbxref=Genbank:WP_000075775.1;Name=WP_000075775.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456603.1;locus_tag=STY7866_RS06015;product=propanediol utilization microcompartment protein PduT;protein_id=WP_000075775.1;transl_table=11
NZ_CAAR01000157.1	RefSeq	gene	6609	6959	.	+	.	ID=gene-STY7866_RS06020;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=STY7866_RS06020
NZ_CAAR01000157.1	Protein Homology	CDS	6609	6959	.	+	0	ID=cds-WP_000441103.1;Parent=gene-STY7866_RS06020;Dbxref=Genbank:WP_000441103.1;Name=WP_000441103.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456604.1;locus_tag=STY7866_RS06020;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000441103.1;transl_table=11
NZ_CAAR01000157.1	RefSeq	gene	6964	7416	.	+	.	ID=gene-STY7866_RS06025;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=STY7866_RS06025
NZ_CAAR01000157.1	Protein Homology	CDS	6964	7416	.	+	0	ID=cds-WP_000826280.1;Parent=gene-STY7866_RS06025;Dbxref=Genbank:WP_000826280.1;Name=WP_000826280.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456605.1;locus_tag=STY7866_RS06025;product=propanediol utilization protein PduV;protein_id=WP_000826280.1;transl_table=11
NZ_CAAR01000157.1	RefSeq	pseudogene	7401	8080	.	+	.	ID=gene-STY7866_RS06030;Name=pduW;end_range=8080,.;gbkey=Gene;gene=pduW;gene_biotype=pseudogene;locus_tag=STY7866_RS06030;partial=true;pseudo=true
NZ_CAAR01000157.1	Protein Homology	CDS	7401	8080	.	+	0	ID=cds-STY7866_RS06030;Parent=gene-STY7866_RS06030;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=8080,.;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456606.1;locus_tag=STY7866_RS06030;partial=true;product=propanediol utilization propionate kinase PduW;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000156.1 1 18403
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000156.1	RefSeq	region	1	18403	.	+	.	ID=NZ_CAAR01000156.1:1..18403;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000156.1	RefSeq	pseudogene	1	82	.	-	.	ID=gene-STY7866_RS26965;Name=STY7866_RS26965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26965;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000156.1	Protein Homology	CDS	1	82	.	-	0	ID=cds-STY7866_RS26965;Parent=gene-STY7866_RS26965;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457582.1;locus_tag=STY7866_RS26965;partial=true;product=zinc transporter ZupT;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000156.1	RefSeq	gene	224	1012	.	+	.	ID=gene-STY7866_RS05890;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=STY7866_RS05890
NZ_CAAR01000156.1	Protein Homology	CDS	224	1012	.	+	0	ID=cds-WP_000059619.1;Parent=gene-STY7866_RS05890;Dbxref=Genbank:WP_000059619.1;Name=WP_000059619.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001520560.1;locus_tag=STY7866_RS05890;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_000059619.1;transl_table=11
NZ_CAAR01000156.1	RefSeq	gene	1074	2237	.	-	.	ID=gene-STY7866_RS05895;Name=STY7866_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05895
NZ_CAAR01000156.1	Protein Homology	CDS	1074	2237	.	-	0	ID=cds-WP_000442833.1;Parent=gene-STY7866_RS05895;Dbxref=Genbank:WP_000442833.1;Name=WP_000442833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457580.1;locus_tag=STY7866_RS05895;product=glutathionylspermidine synthase family protein;protein_id=WP_000442833.1;transl_table=11
NZ_CAAR01000156.1	RefSeq	gene	2243	2914	.	-	.	ID=gene-STY7866_RS05900;Name=STY7866_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05900
NZ_CAAR01000156.1	Protein Homology	CDS	2243	2914	.	-	0	ID=cds-WP_000831528.1;Parent=gene-STY7866_RS05900;Dbxref=Genbank:WP_000831528.1;Name=WP_000831528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457579.1;locus_tag=STY7866_RS05900;product=DUF1190 family protein;protein_id=WP_000831528.1;transl_table=11
NZ_CAAR01000156.1	RefSeq	gene	3127	4602	.	-	.	ID=gene-STY7866_RS05905;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=STY7866_RS05905
NZ_CAAR01000156.1	Protein Homology	CDS	3127	4602	.	-	0	ID=cds-WP_001663008.1;Parent=gene-STY7866_RS05905;Dbxref=Genbank:WP_001663008.1;Name=WP_001663008.1;gbkey=CDS;gene=tolC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457578.3;locus_tag=STY7866_RS05905;product=outer membrane channel protein TolC;protein_id=WP_001663008.1;transl_table=11
NZ_CAAR01000156.1	RefSeq	gene	4803	5435	.	+	.	ID=gene-STY7866_RS05910;Name=STY7866_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05910
NZ_CAAR01000156.1	Protein Homology	CDS	4803	5435	.	+	0	ID=cds-WP_001231952.1;Parent=gene-STY7866_RS05910;Dbxref=Genbank:WP_001231952.1;Name=WP_001231952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457577.1;locus_tag=STY7866_RS05910;product=ADP-ribose diphosphatase;protein_id=WP_001231952.1;transl_table=11
NZ_CAAR01000156.1	RefSeq	gene	5432	5854	.	+	.	ID=gene-STY7866_RS05915;Name=STY7866_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05915
NZ_CAAR01000156.1	Protein Homology	CDS	5432	5854	.	+	0	ID=cds-WP_000833403.1;Parent=gene-STY7866_RS05915;Dbxref=Genbank:WP_000833403.1;Name=WP_000833403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457576.1;locus_tag=STY7866_RS05915;product=DUF1249 family protein;protein_id=WP_000833403.1;transl_table=11
NZ_CAAR01000156.1	RefSeq	gene	5879	6706	.	+	.	ID=gene-STY7866_RS05920;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=STY7866_RS05920
NZ_CAAR01000156.1	Protein Homology	CDS	5879	6706	.	+	0	ID=cds-WP_000444734.1;Parent=gene-STY7866_RS05920;Dbxref=Genbank:WP_000444734.1;Name=WP_000444734.1;gbkey=CDS;gene=cpdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457575.1;locus_tag=STY7866_RS05920;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444734.1;transl_table=11
NZ_CAAR01000156.1	RefSeq	gene	6706	7287	.	+	.	ID=gene-STY7866_RS05925;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=STY7866_RS05925
NZ_CAAR01000156.1	Protein Homology	CDS	6706	7287	.	+	0	ID=cds-WP_000105725.1;Parent=gene-STY7866_RS05925;Dbxref=Genbank:WP_000105725.1;Name=WP_000105725.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457574.1;locus_tag=STY7866_RS05925;product=esterase YqiA;protein_id=WP_000105725.1;transl_table=11
NZ_CAAR01000156.1	RefSeq	pseudogene	7315	9206	.	+	.	ID=gene-STY7866_RS05930;Name=parE;gbkey=Gene;gene=parE;gene_biotype=pseudogene;locus_tag=STY7866_RS05930;pseudo=true
NZ_CAAR01000156.1	Protein Homology	CDS	7315	9206	.	+	0	ID=cds-STY7866_RS05930;Parent=gene-STY7866_RS05930;Note=frameshifted;gbkey=CDS;gene=parE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457573.1;locus_tag=STY7866_RS05930;product=DNA topoisomerase IV subunit B;pseudo=true;transl_table=11
NZ_CAAR01000156.1	RefSeq	gene	9331	9645	.	-	.	ID=gene-STY7866_RS05935;Name=STY7866_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05935
NZ_CAAR01000156.1	Protein Homology	CDS	9331	9645	.	-	0	ID=cds-WP_000958587.1;Parent=gene-STY7866_RS05935;Dbxref=Genbank:WP_000958587.1;Name=WP_000958587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457572.1;locus_tag=STY7866_RS05935;product=antibiotic biosynthesis monooxygenase;protein_id=WP_000958587.1;transl_table=11
NZ_CAAR01000156.1	RefSeq	pseudogene	9677	10257	.	-	.	ID=gene-STY7866_RS05940;Name=STY7866_RS05940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS05940;pseudo=true
NZ_CAAR01000156.1	Protein Homology	CDS	9677	10257	.	-	0	ID=cds-STY7866_RS05940;Parent=gene-STY7866_RS05940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=STY7866_RS05940;product=NAD(P)H-dependent oxidoreductase;pseudo=true;transl_table=11
NZ_CAAR01000156.1	RefSeq	gene	10364	11713	.	-	.	ID=gene-STY7866_RS05945;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=STY7866_RS05945
NZ_CAAR01000156.1	Protein Homology	CDS	10364	11713	.	-	0	ID=cds-WP_000779337.1;Parent=gene-STY7866_RS05945;Dbxref=Genbank:WP_000779337.1;Name=WP_000779337.1;gbkey=CDS;gene=qseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457571.1;locus_tag=STY7866_RS05945;product=two-component system sensor histidine kinase QseC;protein_id=WP_000779337.1;transl_table=11
NZ_CAAR01000156.1	RefSeq	gene	11710	12369	.	-	.	ID=gene-STY7866_RS05950;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=STY7866_RS05950
NZ_CAAR01000156.1	Protein Homology	CDS	11710	12369	.	-	0	ID=cds-WP_001221574.1;Parent=gene-STY7866_RS05950;Dbxref=Genbank:WP_001221574.1;Name=WP_001221574.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457570.1;locus_tag=STY7866_RS05950;product=two-component system response regulator QseB;protein_id=WP_001221574.1;transl_table=11
NZ_CAAR01000156.1	RefSeq	gene	12521	12913	.	+	.	ID=gene-STY7866_RS05955;Name=STY7866_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05955
NZ_CAAR01000156.1	Protein Homology	CDS	12521	12913	.	+	0	ID=cds-WP_000731552.1;Parent=gene-STY7866_RS05955;Dbxref=Genbank:WP_000731552.1;Name=WP_000731552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457569.1;locus_tag=STY7866_RS05955;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_000731552.1;transl_table=11
NZ_CAAR01000156.1	RefSeq	pseudogene	12985	13851	.	+	.	ID=gene-STY7866_RS05960;Name=STY7866_RS05960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS05960;pseudo=true
NZ_CAAR01000156.1	Protein Homology	CDS	12985	13851	.	+	0	ID=cds-STY7866_RS05960;Parent=gene-STY7866_RS05960;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457568.1;locus_tag=STY7866_RS05960;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000156.1	RefSeq	gene	13962	16220	.	+	.	ID=gene-STY7866_RS05965;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=STY7866_RS05965
NZ_CAAR01000156.1	Protein Homology	CDS	13962	16220	.	+	0	ID=cds-WP_001281905.1;Parent=gene-STY7866_RS05965;Dbxref=Genbank:WP_001281905.1;Name=WP_001281905.1;gbkey=CDS;gene=parC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001639862.1;locus_tag=STY7866_RS05965;product=DNA topoisomerase IV subunit A;protein_id=WP_001281905.1;transl_table=11
NZ_CAAR01000156.1	RefSeq	pseudogene	16477	17215	.	+	.	ID=gene-STY7866_RS05970;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=pseudogene;gene_synonym=parF;locus_tag=STY7866_RS05970;pseudo=true
NZ_CAAR01000156.1	Protein Homology	CDS	16477	17215	.	+	0	ID=cds-STY7866_RS05970;Parent=gene-STY7866_RS05970;Note=frameshifted;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457566.1;locus_tag=STY7866_RS05970;product=1-acylglycerol-3-phosphate O-acyltransferase;pseudo=true;transl_table=11
NZ_CAAR01000156.1	RefSeq	gene	17289	18403	.	+	.	ID=gene-STY7866_RS05975;Name=ftsP;end_range=18403,.;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=STY7866_RS05975;partial=true
NZ_CAAR01000156.1	Protein Homology	CDS	17289	18403	.	+	0	ID=cds-WP_000010656.1;Parent=gene-STY7866_RS05975;Dbxref=Genbank:WP_000010656.1;Name=WP_000010656.1;end_range=18403,.;gbkey=CDS;gene=ftsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457565.1;locus_tag=STY7866_RS05975;partial=true;product=cell division protein FtsP;protein_id=WP_000010656.1;transl_table=11
##sequence-region NZ_CAAR01000155.1 1 2777
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000155.1	RefSeq	region	1	2777	.	+	.	ID=NZ_CAAR01000155.1:1..2777;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000155.1	RefSeq	pseudogene	1	165	.	-	.	ID=gene-STY7866_RS05855;Name=STY7866_RS05855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS05855;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000155.1	Protein Homology	CDS	1	165	.	-	0	ID=cds-STY7866_RS05855;Parent=gene-STY7866_RS05855;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458729.1;locus_tag=STY7866_RS05855;partial=true;product=SAM-dependent methyltransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000155.1	RefSeq	gene	165	1055	.	-	.	ID=gene-STY7866_RS05860;Name=STY7866_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05860
NZ_CAAR01000155.1	Protein Homology	CDS	165	1055	.	-	0	ID=cds-WP_001681808.1;Parent=gene-STY7866_RS05860;Dbxref=Genbank:WP_001681808.1;Name=WP_001681808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001804356.1;locus_tag=STY7866_RS05860;product=class I SAM-dependent methyltransferase;protein_id=WP_001681808.1;transl_table=11
NZ_CAAR01000155.1	RefSeq	gene	1066	1323	.	-	.	ID=gene-STY7866_RS05865;Name=STY7866_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05865
NZ_CAAR01000155.1	Protein Homology	CDS	1066	1323	.	-	0	ID=cds-WP_001681810.1;Parent=gene-STY7866_RS05865;Dbxref=Genbank:WP_001681810.1;Name=WP_001681810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458926.1;locus_tag=STY7866_RS05865;product=hypothetical protein;protein_id=WP_001681810.1;transl_table=11
NZ_CAAR01000155.1	RefSeq	gene	1970	2323	.	+	.	ID=gene-STY7866_RS05875;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=STY7866_RS05875
NZ_CAAR01000155.1	Protein Homology	CDS	1970	2323	.	+	0	ID=cds-WP_000902197.1;Parent=gene-STY7866_RS05875;Dbxref=Genbank:WP_000902197.1;Name=WP_000902197.1;gbkey=CDS;gene=umuD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000902197.1;locus_tag=STY7866_RS05875;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000902197.1;transl_table=11
NZ_CAAR01000155.1	RefSeq	pseudogene	2430	2777	.	-	.	ID=gene-STY7866_RS26960;Name=STY7866_RS26960;end_range=2777,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26960;partial=true;pseudo=true
NZ_CAAR01000155.1	Protein Homology	CDS	2430	2777	.	-	2	ID=cds-STY7866_RS26960;Parent=gene-STY7866_RS26960;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=2777,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458725.1;locus_tag=STY7866_RS26960;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000154.1 1 8913
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000154.1	RefSeq	region	1	8913	.	+	.	ID=NZ_CAAR01000154.1:1..8913;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000154.1	RefSeq	gene	149	880	.	+	.	ID=gene-STY7866_RS05810;Name=STY7866_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05810
NZ_CAAR01000154.1	Protein Homology	CDS	149	880	.	+	0	ID=cds-WP_000737538.1;Parent=gene-STY7866_RS05810;Dbxref=Genbank:WP_000737538.1;Name=WP_000737538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455414.1;locus_tag=STY7866_RS05810;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000737538.1;transl_table=11
NZ_CAAR01000154.1	RefSeq	pseudogene	1099	2585	.	-	.	ID=gene-STY7866_RS05815;Name=STY7866_RS05815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS05815;pseudo=true
NZ_CAAR01000154.1	Protein Homology	CDS	1099	2585	.	-	0	ID=cds-STY7866_RS05815;Parent=gene-STY7866_RS05815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455413.1;locus_tag=STY7866_RS05815;product=sulfatase;pseudo=true;transl_table=11
NZ_CAAR01000154.1	RefSeq	gene	2595	2915	.	-	.	ID=gene-STY7866_RS05820;Name=STY7866_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05820
NZ_CAAR01000154.1	Protein Homology	CDS	2595	2915	.	-	0	ID=cds-WP_000655399.1;Parent=gene-STY7866_RS05820;Dbxref=Genbank:WP_000655399.1;Name=WP_000655399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=STY7866_RS05820;product=PTS sugar transporter subunit IIB;protein_id=WP_000655399.1;transl_table=11
NZ_CAAR01000154.1	RefSeq	gene	2947	4290	.	-	.	ID=gene-STY7866_RS05825;Name=STY7866_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05825
NZ_CAAR01000154.1	Protein Homology	CDS	2947	4290	.	-	0	ID=cds-WP_000399315.1;Parent=gene-STY7866_RS05825;Dbxref=Genbank:WP_000399315.1;Name=WP_000399315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455411.1;locus_tag=STY7866_RS05825;product=PTS sugar transporter subunit IIC;protein_id=WP_000399315.1;transl_table=11
NZ_CAAR01000154.1	RefSeq	gene	4299	4508	.	-	.	ID=gene-STY7866_RS26955;Name=STY7866_RS26955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26955
NZ_CAAR01000154.1	Protein Homology	CDS	4299	4508	.	-	0	ID=cds-WP_001780848.1;Parent=gene-STY7866_RS26955;Dbxref=Genbank:WP_001780848.1;Name=WP_001780848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528836.1;locus_tag=STY7866_RS26955;product=hypothetical protein;protein_id=WP_001780848.1;transl_table=11
NZ_CAAR01000154.1	RefSeq	gene	4585	5712	.	-	.	ID=gene-STY7866_RS05830;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=STY7866_RS05830
NZ_CAAR01000154.1	Protein Homology	CDS	4585	5712	.	-	0	ID=cds-WP_001149787.1;Parent=gene-STY7866_RS05830;Dbxref=Genbank:WP_001149787.1;Name=WP_001149787.1;gbkey=CDS;gene=rlmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455409.1;locus_tag=STY7866_RS05830;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_001149787.1;transl_table=11
NZ_CAAR01000154.1	RefSeq	gene	5755	6228	.	-	.	ID=gene-STY7866_RS05835;Name=STY7866_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05835
NZ_CAAR01000154.1	Protein Homology	CDS	5755	6228	.	-	0	ID=cds-WP_001763976.1;Parent=gene-STY7866_RS05835;Dbxref=Genbank:WP_001763976.1;Name=WP_001763976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455408.1;locus_tag=STY7866_RS05835;product=YbjO family protein;protein_id=WP_001763976.1;transl_table=11
NZ_CAAR01000154.1	RefSeq	gene	6302	7147	.	-	.	ID=gene-STY7866_RS05840;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=STY7866_RS05840
NZ_CAAR01000154.1	Protein Homology	CDS	6302	7147	.	-	0	ID=cds-WP_001061634.1;Parent=gene-STY7866_RS05840;Dbxref=Genbank:WP_001061634.1;Name=WP_001061634.1;gbkey=CDS;gene=potI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455407.1;locus_tag=STY7866_RS05840;product=putrescine ABC transporter permease PotI;protein_id=WP_001061634.1;transl_table=11
NZ_CAAR01000154.1	RefSeq	gene	7144	8097	.	-	.	ID=gene-STY7866_RS05845;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=STY7866_RS05845
NZ_CAAR01000154.1	Protein Homology	CDS	7144	8097	.	-	0	ID=cds-WP_000105449.1;Parent=gene-STY7866_RS05845;Dbxref=Genbank:WP_000105449.1;Name=WP_000105449.1;gbkey=CDS;gene=potH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455406.1;locus_tag=STY7866_RS05845;product=putrescine ABC transporter permease PotH;protein_id=WP_000105449.1;transl_table=11
NZ_CAAR01000154.1	RefSeq	gene	8107	8913	.	-	.	ID=gene-STY7866_RS05850;Name=potA;end_range=8913,.;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=STY7866_RS05850;partial=true
NZ_CAAR01000154.1	Protein Homology	CDS	8107	8913	.	-	0	ID=cds-WP_000302857.1;Parent=gene-STY7866_RS05850;Dbxref=Genbank:WP_000302857.1;Name=WP_000302857.1;end_range=8913,.;gbkey=CDS;gene=potA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455405.1;locus_tag=STY7866_RS05850;partial=true;product=polyamine ABC transporter ATP-binding protein;protein_id=WP_000302857.1;transl_table=11
##sequence-region NZ_CAAR01000153.1 1 2027
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000153.1	RefSeq	region	1	2027	.	+	.	ID=NZ_CAAR01000153.1:1..2027;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000153.1	RefSeq	gene	1	494	.	-	.	ID=gene-STY7866_RS05790;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=STY7866_RS05790;partial=true;start_range=.,1
NZ_CAAR01000153.1	Protein Homology	CDS	1	494	.	-	0	ID=cds-WP_000572198.1;Parent=gene-STY7866_RS05790;Dbxref=Genbank:WP_000572198.1;Name=WP_000572198.1;gbkey=CDS;gene=ugpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=STY7866_RS05790;partial=true;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572198.1;start_range=.,1;transl_table=11
NZ_CAAR01000153.1	RefSeq	gene	491	1378	.	-	.	ID=gene-STY7866_RS05795;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=STY7866_RS05795
NZ_CAAR01000153.1	Protein Homology	CDS	491	1378	.	-	0	ID=cds-WP_000099303.1;Parent=gene-STY7866_RS05795;Dbxref=Genbank:WP_000099303.1;Name=WP_000099303.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=STY7866_RS05795;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099303.1;transl_table=11
NZ_CAAR01000153.1	RefSeq	gene	1483	2027	.	-	.	ID=gene-STY7866_RS05800;Name=STY7866_RS05800;end_range=2027,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05800;partial=true
NZ_CAAR01000153.1	Protein Homology	CDS	1483	2027	.	-	2	ID=cds-WP_000326380.1;Parent=gene-STY7866_RS05800;Dbxref=Genbank:WP_000326380.1;Name=WP_000326380.1;end_range=2027,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458362.1;locus_tag=STY7866_RS05800;partial=true;product=extracellular solute-binding protein;protein_id=WP_000326380.1;transl_table=11
##sequence-region NZ_CAAR01000152.1 1 5864
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000152.1	RefSeq	region	1	5864	.	+	.	ID=NZ_CAAR01000152.1:1..5864;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000152.1	RefSeq	pseudogene	1	290	.	-	.	ID=gene-STY7866_RS05765;Name=malG;gbkey=Gene;gene=malG;gene_biotype=pseudogene;locus_tag=STY7866_RS05765;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000152.1	Protein Homology	CDS	1	290	.	-	0	ID=cds-STY7866_RS05765;Parent=gene-STY7866_RS05765;Note=with MalKFE is involved in the transport of maltose into the cell%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=malG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458525.1;locus_tag=STY7866_RS05765;partial=true;product=maltose ABC transporter permease MalG;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000152.1	RefSeq	gene	305	1849	.	-	.	ID=gene-STY7866_RS05770;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=STY7866_RS05770
NZ_CAAR01000152.1	Protein Homology	CDS	305	1849	.	-	0	ID=cds-WP_000382568.1;Parent=gene-STY7866_RS05770;Dbxref=Genbank:WP_000382568.1;Name=WP_000382568.1;gbkey=CDS;gene=malF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458526.1;locus_tag=STY7866_RS05770;product=maltose ABC transporter permease MalF;protein_id=WP_000382568.1;transl_table=11
NZ_CAAR01000152.1	RefSeq	gene	1981	3171	.	-	.	ID=gene-STY7866_RS05775;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=STY7866_RS05775
NZ_CAAR01000152.1	Protein Homology	CDS	1981	3171	.	-	0	ID=cds-WP_000695415.1;Parent=gene-STY7866_RS05775;Dbxref=Genbank:WP_000695415.1;Name=WP_000695415.1;gbkey=CDS;gene=malE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=STY7866_RS05775;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695415.1;transl_table=11
NZ_CAAR01000152.1	RefSeq	gene	3533	4642	.	+	.	ID=gene-STY7866_RS05780;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=STY7866_RS05780
NZ_CAAR01000152.1	Protein Homology	CDS	3533	4642	.	+	0	ID=cds-WP_000179176.1;Parent=gene-STY7866_RS05780;Dbxref=Genbank:WP_000179176.1;Name=WP_000179176.1;gbkey=CDS;gene=malK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=STY7866_RS05780;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179176.1;transl_table=11
NZ_CAAR01000152.1	RefSeq	gene	4731	5864	.	+	.	ID=gene-STY7866_RS05785;Name=STY7866_RS05785;end_range=5864,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05785;partial=true
NZ_CAAR01000152.1	Protein Homology	CDS	4731	5864	.	+	0	ID=cds-WP_000973680.1;Parent=gene-STY7866_RS05785;Dbxref=Genbank:WP_000973680.1;Name=WP_000973680.1;end_range=5864,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458529.1;locus_tag=STY7866_RS05785;partial=true;product=maltoporin;protein_id=WP_000973680.1;transl_table=11
##sequence-region NZ_CAAR01000151.1 1 4864
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000151.1	RefSeq	region	1	4864	.	+	.	ID=NZ_CAAR01000151.1:1..4864;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000151.1	RefSeq	pseudogene	1	509	.	-	.	ID=gene-STY7866_RS05735;Name=STY7866_RS05735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS05735;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000151.1	Protein Homology	CDS	1	509	.	-	0	ID=cds-STY7866_RS05735;Parent=gene-STY7866_RS05735;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=STY7866_RS05735;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000151.1	RefSeq	gene	864	1823	.	-	.	ID=gene-STY7866_RS05740;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=STY7866_RS05740
NZ_CAAR01000151.1	Protein Homology	CDS	864	1823	.	-	0	ID=cds-WP_000777898.1;Parent=gene-STY7866_RS05740;Dbxref=Genbank:WP_000777898.1;Name=WP_000777898.1;gbkey=CDS;gene=nrdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457207.1;locus_tag=STY7866_RS05740;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777898.1;transl_table=11
NZ_CAAR01000151.1	RefSeq	gene	1834	3978	.	-	.	ID=gene-STY7866_RS05745;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=STY7866_RS05745
NZ_CAAR01000151.1	Protein Homology	CDS	1834	3978	.	-	0	ID=cds-WP_000201426.1;Parent=gene-STY7866_RS05745;Dbxref=Genbank:WP_000201426.1;Name=WP_000201426.1;gbkey=CDS;gene=nrdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457206.1;locus_tag=STY7866_RS05745;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_000201426.1;transl_table=11
NZ_CAAR01000151.1	RefSeq	gene	3951	4361	.	-	.	ID=gene-STY7866_RS05750;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=STY7866_RS05750
NZ_CAAR01000151.1	Protein Homology	CDS	3951	4361	.	-	0	ID=cds-WP_001275406.1;Parent=gene-STY7866_RS05750;Dbxref=Genbank:WP_001275406.1;Name=WP_001275406.1;gbkey=CDS;gene=nrdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457205.1;locus_tag=STY7866_RS05750;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001275406.1;transl_table=11
NZ_CAAR01000151.1	RefSeq	gene	4358	4603	.	-	.	ID=gene-STY7866_RS05755;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=STY7866_RS05755
NZ_CAAR01000151.1	Protein Homology	CDS	4358	4603	.	-	0	ID=cds-WP_000028873.1;Parent=gene-STY7866_RS05755;Dbxref=Genbank:WP_000028873.1;Name=WP_000028873.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457204.1;locus_tag=STY7866_RS05755;product=glutaredoxin-like protein NrdH;protein_id=WP_000028873.1;transl_table=11
NZ_CAAR01000151.1	RefSeq	gene	4702	4851	.	-	.	ID=gene-STY7866_RS05760;Name=STY7866_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05760
NZ_CAAR01000151.1	Protein Homology	CDS	4702	4851	.	-	0	ID=cds-WP_014341460.1;Parent=gene-STY7866_RS05760;Dbxref=Genbank:WP_014341460.1;Name=WP_014341460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341460.1;locus_tag=STY7866_RS05760;product=hypothetical protein;protein_id=WP_014341460.1;transl_table=11
##sequence-region NZ_CAAR01000150.1 1 12332
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000150.1	RefSeq	region	1	12332	.	+	.	ID=NZ_CAAR01000150.1:1..12332;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000150.1	RefSeq	gene	1	523	.	-	.	ID=gene-STY7866_RS05685;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=STY7866_RS05685;partial=true;start_range=.,1
NZ_CAAR01000150.1	Protein Homology	CDS	1	523	.	-	0	ID=cds-WP_000642328.1;Parent=gene-STY7866_RS05685;Dbxref=Genbank:WP_000642328.1;Name=WP_000642328.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457374.1;locus_tag=STY7866_RS05685;partial=true;product=L-fucose operon activator;protein_id=WP_000642328.1;start_range=.,1;transl_table=11
NZ_CAAR01000150.1	RefSeq	gene	581	1003	.	-	.	ID=gene-STY7866_RS05690;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=STY7866_RS05690
NZ_CAAR01000150.1	Protein Homology	CDS	581	1003	.	-	0	ID=cds-WP_000920848.1;Parent=gene-STY7866_RS05690;Dbxref=Genbank:WP_000920848.1;Name=WP_000920848.1;gbkey=CDS;gene=fucU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457373.1;locus_tag=STY7866_RS05690;product=L-fucose mutarotase;protein_id=WP_000920848.1;transl_table=11
NZ_CAAR01000150.1	RefSeq	gene	1005	2423	.	-	.	ID=gene-STY7866_RS05695;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=STY7866_RS05695
NZ_CAAR01000150.1	Protein Homology	CDS	1005	2423	.	-	0	ID=cds-WP_001763972.1;Parent=gene-STY7866_RS05695;Dbxref=Genbank:WP_001763972.1;Name=WP_001763972.1;gbkey=CDS;gene=fucK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457372.1;locus_tag=STY7866_RS05695;product=L-fuculokinase;protein_id=WP_001763972.1;transl_table=11
NZ_CAAR01000150.1	RefSeq	gene	2569	4299	.	-	.	ID=gene-STY7866_RS05700;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=STY7866_RS05700
NZ_CAAR01000150.1	Protein Homology	CDS	2569	4299	.	-	0	ID=cds-WP_000724125.1;Parent=gene-STY7866_RS05700;Dbxref=Genbank:WP_000724125.1;Name=WP_000724125.1;gbkey=CDS;gene=fucI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457371.1;locus_tag=STY7866_RS05700;product=L-fucose isomerase;protein_id=WP_000724125.1;transl_table=11
NZ_CAAR01000150.1	RefSeq	pseudogene	4331	5648	.	-	.	ID=gene-STY7866_RS05705;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=pseudogene;locus_tag=STY7866_RS05705;pseudo=true
NZ_CAAR01000150.1	Protein Homology	CDS	4331	5648	.	-	0	ID=cds-STY7866_RS05705;Parent=gene-STY7866_RS05705;Note=frameshifted;gbkey=CDS;gene=fucP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457370.1;locus_tag=STY7866_RS05705;product=L-fucose:H+ symporter permease;pseudo=true;transl_table=11
NZ_CAAR01000150.1	RefSeq	pseudogene	6204	6850	.	+	.	ID=gene-STY7866_RS05710;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=pseudogene;locus_tag=STY7866_RS05710;pseudo=true
NZ_CAAR01000150.1	Protein Homology	CDS	6204	6850	.	+	0	ID=cds-STY7866_RS05710;Parent=gene-STY7866_RS05710;Note=frameshifted;gbkey=CDS;gene=fucA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457369.1;locus_tag=STY7866_RS05710;product=L-fuculose-phosphate aldolase;pseudo=true;transl_table=11
NZ_CAAR01000150.1	RefSeq	gene	6867	8015	.	+	.	ID=gene-STY7866_RS05715;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=STY7866_RS05715
NZ_CAAR01000150.1	Protein Homology	CDS	6867	8015	.	+	0	ID=cds-WP_000013573.1;Parent=gene-STY7866_RS05715;Dbxref=Genbank:WP_000013573.1;Name=WP_000013573.1;gbkey=CDS;gene=fucO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457368.1;locus_tag=STY7866_RS05715;product=lactaldehyde reductase;protein_id=WP_000013573.1;transl_table=11
NZ_CAAR01000150.1	RefSeq	gene	8107	8922	.	-	.	ID=gene-STY7866_RS05720;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=STY7866_RS05720
NZ_CAAR01000150.1	Protein Homology	CDS	8107	8922	.	-	0	ID=cds-WP_000881450.1;Parent=gene-STY7866_RS05720;Dbxref=Genbank:WP_000881450.1;Name=WP_000881450.1;gbkey=CDS;gene=xni;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457367.1;locus_tag=STY7866_RS05720;product=flap endonuclease Xni;protein_id=WP_000881450.1;transl_table=11
NZ_CAAR01000150.1	RefSeq	gene	9033	10400	.	-	.	ID=gene-STY7866_RS05725;Name=STY7866_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05725
NZ_CAAR01000150.1	Protein Homology	CDS	9033	10400	.	-	0	ID=cds-WP_000626388.1;Parent=gene-STY7866_RS05725;Dbxref=Genbank:WP_000626388.1;Name=WP_000626388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457366.1;locus_tag=STY7866_RS05725;product=L-serine ammonia-lyase II;protein_id=WP_000626388.1;transl_table=11
NZ_CAAR01000150.1	RefSeq	gene	10459	11748	.	-	.	ID=gene-STY7866_RS05730;Name=STY7866_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05730
NZ_CAAR01000150.1	Protein Homology	CDS	10459	11748	.	-	0	ID=cds-WP_000450462.1;Parent=gene-STY7866_RS05730;Dbxref=Genbank:WP_000450462.1;Name=WP_000450462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=STY7866_RS05730;product=HAAAP family serine/threonine permease;protein_id=WP_000450462.1;transl_table=11
##sequence-region NZ_CAAR01000149.1 1 1062
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000149.1	RefSeq	region	1	1062	.	+	.	ID=NZ_CAAR01000149.1:1..1062;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000149.1	RefSeq	gene	1	1062	.	+	.	ID=gene-STY7866_RS05680;Name=STY7866_RS05680;end_range=1062,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05680;partial=true;start_range=.,1
NZ_CAAR01000149.1	Protein Homology	CDS	1	1062	.	+	1	ID=cds-WP_001763971.1;Parent=gene-STY7866_RS05680;Dbxref=Genbank:WP_001763971.1;Name=WP_001763971.1;end_range=1062,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123573.1;locus_tag=STY7866_RS05680;partial=true;product=replication-associated recombination protein A;protein_id=WP_001763971.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000148.1 1 24093
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000148.1	RefSeq	region	1	24093	.	+	.	ID=NZ_CAAR01000148.1:1..24093;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000148.1	RefSeq	gene	1	127	.	+	.	ID=gene-STY7866_RS26950;Name=STY7866_RS26950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26950;partial=true;start_range=.,1
NZ_CAAR01000148.1	Protein Homology	CDS	1	127	.	+	1	ID=cds-WP_001763967.1;Parent=gene-STY7866_RS26950;Dbxref=Genbank:WP_001763967.1;Name=WP_001763967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13956.4;locus_tag=STY7866_RS26950;partial=true;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001763967.1;start_range=.,1;transl_table=11
NZ_CAAR01000148.1	RefSeq	gene	226	1578	.	-	.	ID=gene-STY7866_RS05575;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=STY7866_RS05575
NZ_CAAR01000148.1	Protein Homology	CDS	226	1578	.	-	0	ID=cds-WP_000469615.1;Parent=gene-STY7866_RS05575;Dbxref=Genbank:WP_000469615.1;Name=WP_000469615.1;gbkey=CDS;gene=yegD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456671.1;locus_tag=STY7866_RS05575;product=molecular chaperone;protein_id=WP_000469615.1;transl_table=11
NZ_CAAR01000148.1	RefSeq	gene	1712	2581	.	+	.	ID=gene-STY7866_RS05580;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=STY7866_RS05580
NZ_CAAR01000148.1	Protein Homology	CDS	1712	2581	.	+	0	ID=cds-WP_000494722.1;Parent=gene-STY7866_RS05580;Dbxref=Genbank:WP_000494722.1;Name=WP_000494722.1;gbkey=CDS;gene=alkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456670.1;locus_tag=STY7866_RS05580;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_000494722.1;transl_table=11
NZ_CAAR01000148.1	RefSeq	pseudogene	2549	5541	.	-	.	ID=gene-STY7866_RS05585;Name=STY7866_RS05585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS05585;pseudo=true
NZ_CAAR01000148.1	Protein Homology	CDS	2549	5541	.	-	0	ID=cds-STY7866_RS05585;Parent=gene-STY7866_RS05585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456669.1;locus_tag=STY7866_RS05585;product=diguanylate cyclase;pseudo=true;transl_table=11
NZ_CAAR01000148.1	RefSeq	gene	5872	6513	.	+	.	ID=gene-STY7866_RS05590;Name=STY7866_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05590
NZ_CAAR01000148.1	Protein Homology	CDS	5872	6513	.	+	0	ID=cds-WP_000132082.1;Parent=gene-STY7866_RS05590;Dbxref=Genbank:WP_000132082.1;Name=WP_000132082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456668.1;locus_tag=STY7866_RS05590;product=uridine kinase;protein_id=WP_000132082.1;transl_table=11
NZ_CAAR01000148.1	RefSeq	gene	6604	7185	.	+	.	ID=gene-STY7866_RS05595;Name=STY7866_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05595
NZ_CAAR01000148.1	Protein Homology	CDS	6604	7185	.	+	0	ID=cds-WP_001234783.1;Parent=gene-STY7866_RS05595;Dbxref=Genbank:WP_001234783.1;Name=WP_001234783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456667.1;locus_tag=STY7866_RS05595;product=dCTP deaminase;protein_id=WP_001234783.1;transl_table=11
NZ_CAAR01000148.1	RefSeq	gene	7224	9080	.	+	.	ID=gene-STY7866_RS05600;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=STY7866_RS05600
NZ_CAAR01000148.1	Protein Homology	CDS	7224	9080	.	+	0	ID=cds-WP_001252274.1;Parent=gene-STY7866_RS05600;Dbxref=Genbank:WP_001252274.1;Name=WP_001252274.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456666.1;locus_tag=STY7866_RS05600;product=outer membrane assembly protein AsmA;protein_id=WP_001252274.1;transl_table=11
NZ_CAAR01000148.1	RefSeq	gene	9166	10746	.	-	.	ID=gene-STY7866_RS05605;Name=STY7866_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05605
NZ_CAAR01000148.1	Protein Homology	CDS	9166	10746	.	-	0	ID=cds-WP_000454718.1;Parent=gene-STY7866_RS05605;Dbxref=Genbank:WP_000454718.1;Name=WP_000454718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456665.1;locus_tag=STY7866_RS05605;product=TerC family protein;protein_id=WP_000454718.1;transl_table=11
NZ_CAAR01000148.1	RefSeq	pseudogene	11420	12560	.	+	.	ID=gene-STY7866_RS05610;Name=STY7866_RS05610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS05610;pseudo=true
NZ_CAAR01000148.1	Protein Homology	CDS	11420	12560	.	+	0	ID=cds-STY7866_RS05610;Parent=gene-STY7866_RS05610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456664.1;locus_tag=STY7866_RS05610;product=polysaccharide export protein;pseudo=true;transl_table=11
NZ_CAAR01000148.1	RefSeq	gene	12566	13015	.	+	.	ID=gene-STY7866_RS05615;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=STY7866_RS05615
NZ_CAAR01000148.1	Protein Homology	CDS	12566	13015	.	+	0	ID=cds-WP_000482225.1;Parent=gene-STY7866_RS05615;Dbxref=Genbank:WP_000482225.1;Name=WP_000482225.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456663.1;locus_tag=STY7866_RS05615;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482225.1;transl_table=11
NZ_CAAR01000148.1	RefSeq	pseudogene	13012	15173	.	+	.	ID=gene-STY7866_RS05620;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=pseudogene;locus_tag=STY7866_RS05620;pseudo=true
NZ_CAAR01000148.1	Protein Homology	CDS	13012	15173	.	+	0	ID=cds-STY7866_RS05620;Parent=gene-STY7866_RS05620;Note=frameshifted;gbkey=CDS;gene=wzc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456662.1;locus_tag=STY7866_RS05620;product=tyrosine-protein kinase Wzc;pseudo=true;transl_table=11
NZ_CAAR01000148.1	RefSeq	gene	15260	16102	.	+	.	ID=gene-STY7866_RS05625;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=STY7866_RS05625
NZ_CAAR01000148.1	Protein Homology	CDS	15260	16102	.	+	0	ID=cds-WP_000205692.1;Parent=gene-STY7866_RS05625;Dbxref=Genbank:WP_000205692.1;Name=WP_000205692.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=STY7866_RS05625;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000205692.1;transl_table=11
NZ_CAAR01000148.1	RefSeq	gene	16105	16593	.	+	.	ID=gene-STY7866_RS05630;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=STY7866_RS05630
NZ_CAAR01000148.1	Protein Homology	CDS	16105	16593	.	+	0	ID=cds-WP_000888724.1;Parent=gene-STY7866_RS05630;Dbxref=Genbank:WP_000888724.1;Name=WP_000888724.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456661.1;locus_tag=STY7866_RS05630;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888724.1;transl_table=11
NZ_CAAR01000148.1	RefSeq	gene	16590	17807	.	+	.	ID=gene-STY7866_RS05635;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=STY7866_RS05635
NZ_CAAR01000148.1	Protein Homology	CDS	16590	17807	.	+	0	ID=cds-WP_001023824.1;Parent=gene-STY7866_RS05635;Dbxref=Genbank:WP_001023824.1;Name=WP_001023824.1;gbkey=CDS;gene=wcaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456660.1;locus_tag=STY7866_RS05635;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_001023824.1;transl_table=11
NZ_CAAR01000148.1	RefSeq	pseudogene	17782	18994	.	+	.	ID=gene-STY7866_RS05640;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=pseudogene;locus_tag=STY7866_RS05640;pseudo=true
NZ_CAAR01000148.1	Protein Homology	CDS	17782	18994	.	+	0	ID=cds-STY7866_RS05640;Parent=gene-STY7866_RS05640;Note=frameshifted;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=STY7866_RS05640;product=putative colanic acid polymerase WcaD;pseudo=true;transl_table=11
NZ_CAAR01000148.1	RefSeq	gene	19007	19753	.	+	.	ID=gene-STY7866_RS05645;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=STY7866_RS05645
NZ_CAAR01000148.1	Protein Homology	CDS	19007	19753	.	+	0	ID=cds-WP_000480132.1;Parent=gene-STY7866_RS05645;Dbxref=Genbank:WP_000480132.1;Name=WP_000480132.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456659.1;locus_tag=STY7866_RS05645;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_000480132.1;transl_table=11
NZ_CAAR01000148.1	RefSeq	gene	19769	20323	.	+	.	ID=gene-STY7866_RS05650;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=STY7866_RS05650
NZ_CAAR01000148.1	Protein Homology	CDS	19769	20323	.	+	0	ID=cds-WP_001153597.1;Parent=gene-STY7866_RS05650;Dbxref=Genbank:WP_001153597.1;Name=WP_001153597.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456658.1;locus_tag=STY7866_RS05650;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153597.1;transl_table=11
NZ_CAAR01000148.1	RefSeq	gene	20347	21468	.	+	.	ID=gene-STY7866_RS05655;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=STY7866_RS05655
NZ_CAAR01000148.1	Protein Homology	CDS	20347	21468	.	+	0	ID=cds-WP_000048161.1;Parent=gene-STY7866_RS05655;Dbxref=Genbank:WP_000048161.1;Name=WP_000048161.1;gbkey=CDS;gene=gmd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=STY7866_RS05655;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048161.1;transl_table=11
NZ_CAAR01000148.1	RefSeq	gene	21471	22436	.	+	.	ID=gene-STY7866_RS05660;Name=STY7866_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05660
NZ_CAAR01000148.1	Protein Homology	CDS	21471	22436	.	+	0	ID=cds-WP_001041701.1;Parent=gene-STY7866_RS05660;Dbxref=Genbank:WP_001041701.1;Name=WP_001041701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456656.1;locus_tag=STY7866_RS05660;product=GDP-L-fucose synthase;protein_id=WP_001041701.1;transl_table=11
NZ_CAAR01000148.1	RefSeq	gene	22439	22912	.	+	.	ID=gene-STY7866_RS05665;Name=STY7866_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05665
NZ_CAAR01000148.1	Protein Homology	CDS	22439	22912	.	+	0	ID=cds-WP_001688181.1;Parent=gene-STY7866_RS05665;Dbxref=Genbank:WP_001688181.1;Name=WP_001688181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461052.3;locus_tag=STY7866_RS05665;product=GDP-mannose mannosyl hydrolase;protein_id=WP_001688181.1;transl_table=11
NZ_CAAR01000148.1	RefSeq	gene	22909	24093	.	+	.	ID=gene-STY7866_RS05670;Name=wcaI;end_range=24093,.;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=STY7866_RS05670;partial=true
NZ_CAAR01000148.1	Protein Homology	CDS	22909	24093	.	+	0	ID=cds-WP_000699649.1;Parent=gene-STY7866_RS05670;Dbxref=Genbank:WP_000699649.1;Name=WP_000699649.1;end_range=24093,.;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456654.1;locus_tag=STY7866_RS05670;partial=true;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_000699649.1;transl_table=11
##sequence-region NZ_CAAR01000147.1 1 9110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000147.1	RefSeq	region	1	9110	.	+	.	ID=NZ_CAAR01000147.1:1..9110;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000147.1	RefSeq	gene	174	1853	.	-	.	ID=gene-STY7866_RS05520;Name=STY7866_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05520
NZ_CAAR01000147.1	Protein Homology	CDS	174	1853	.	-	0	ID=cds-WP_000342894.1;Parent=gene-STY7866_RS05520;Dbxref=Genbank:WP_000342894.1;Name=WP_000342894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457590.1;locus_tag=STY7866_RS05520;product=flotillin family protein;protein_id=WP_000342894.1;transl_table=11
NZ_CAAR01000147.1	RefSeq	gene	1872	2492	.	-	.	ID=gene-STY7866_RS05525;Name=STY7866_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05525
NZ_CAAR01000147.1	Protein Homology	CDS	1872	2492	.	-	0	ID=cds-WP_000171735.1;Parent=gene-STY7866_RS05525;Dbxref=Genbank:WP_000171735.1;Name=WP_000171735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457589.1;locus_tag=STY7866_RS05525;product=YqiJ family protein;protein_id=WP_000171735.1;transl_table=11
NZ_CAAR01000147.1	RefSeq	gene	2750	2959	.	+	.	ID=gene-STY7866_RS05530;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=STY7866_RS05530
NZ_CAAR01000147.1	Protein Homology	CDS	2750	2959	.	+	0	ID=cds-WP_000928925.1;Parent=gene-STY7866_RS05530;Dbxref=Genbank:WP_000928925.1;Name=WP_000928925.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=STY7866_RS05530;product=cell surface composition regulator GlgS;protein_id=WP_000928925.1;transl_table=11
NZ_CAAR01000147.1	RefSeq	gene	3034	3330	.	-	.	ID=gene-STY7866_RS05535;Name=STY7866_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05535
NZ_CAAR01000147.1	Protein Homology	CDS	3034	3330	.	-	0	ID=cds-WP_000566824.1;Parent=gene-STY7866_RS05535;Dbxref=Genbank:WP_000566824.1;Name=WP_000566824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003828426.1;locus_tag=STY7866_RS05535;product=accessory factor UbiK family protein;protein_id=WP_000566824.1;transl_table=11
NZ_CAAR01000147.1	cmsearch	riboswitch	3463	3661	.	+	.	ID=id-NZ_CAAR01000147.1:3463..3661;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_CAAR01000147.1	RefSeq	gene	3767	4420	.	+	.	ID=gene-STY7866_RS05540;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=STY7866_RS05540
NZ_CAAR01000147.1	Protein Homology	CDS	3767	4420	.	+	0	ID=cds-WP_001076978.1;Parent=gene-STY7866_RS05540;Dbxref=Genbank:WP_001076978.1;Name=WP_001076978.1;gbkey=CDS;gene=ribB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001077009.1;locus_tag=STY7866_RS05540;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076978.1;transl_table=11
NZ_CAAR01000147.1	RefSeq	gene	4591	5268	.	-	.	ID=gene-STY7866_RS05545;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=STY7866_RS05545
NZ_CAAR01000147.1	Protein Homology	CDS	4591	5268	.	-	0	ID=cds-WP_000345576.1;Parent=gene-STY7866_RS05545;Dbxref=Genbank:WP_000345576.1;Name=WP_000345576.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457585.1;locus_tag=STY7866_RS05545;product=protein-disulfide oxidoreductase DsbI;protein_id=WP_000345576.1;transl_table=11
NZ_CAAR01000147.1	RefSeq	gene	5283	5954	.	-	.	ID=gene-STY7866_RS05550;Name=STY7866_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05550
NZ_CAAR01000147.1	Protein Homology	CDS	5283	5954	.	-	0	ID=cds-WP_000096232.1;Parent=gene-STY7866_RS05550;Dbxref=Genbank:WP_000096232.1;Name=WP_000096232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457584.1;locus_tag=STY7866_RS05550;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_000096232.1;transl_table=11
NZ_CAAR01000147.1	RefSeq	gene	5974	7770	.	-	.	ID=gene-STY7866_RS05555;Name=STY7866_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05555
NZ_CAAR01000147.1	Protein Homology	CDS	5974	7770	.	-	0	ID=cds-WP_000460261.1;Parent=gene-STY7866_RS05555;Dbxref=Genbank:WP_000460261.1;Name=WP_000460261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457583.1;locus_tag=STY7866_RS05555;product=aryl-sulfate sulfotransferase;protein_id=WP_000460261.1;transl_table=11
NZ_CAAR01000147.1	RefSeq	gene	8413	9110	.	-	.	ID=gene-STY7866_RS05565;Name=zupT;end_range=9110,.;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=STY7866_RS05565;partial=true
NZ_CAAR01000147.1	Protein Homology	CDS	8413	9110	.	-	2	ID=cds-WP_000607771.1;Parent=gene-STY7866_RS05565;Dbxref=Genbank:WP_000607771.1;Name=WP_000607771.1;end_range=9110,.;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457582.1;locus_tag=STY7866_RS05565;partial=true;product=zinc transporter ZupT;protein_id=WP_000607771.1;transl_table=11
##sequence-region NZ_CAAR01000146.1 1 6587
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000146.1	RefSeq	region	1	6587	.	+	.	ID=NZ_CAAR01000146.1:1..6587;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000146.1	RefSeq	gene	1	566	.	+	.	ID=gene-STY7866_RS05480;Name=STY7866_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05480;partial=true;start_range=.,1
NZ_CAAR01000146.1	Protein Homology	CDS	1	566	.	+	2	ID=cds-WP_000397086.1;Parent=gene-STY7866_RS05480;Dbxref=Genbank:WP_000397086.1;Name=WP_000397086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455233.1;locus_tag=STY7866_RS05480;partial=true;product=amino acid ABC transporter permease;protein_id=WP_000397086.1;start_range=.,1;transl_table=11
NZ_CAAR01000146.1	RefSeq	gene	566	1240	.	+	.	ID=gene-STY7866_RS05485;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=STY7866_RS05485
NZ_CAAR01000146.1	Protein Homology	CDS	566	1240	.	+	0	ID=cds-WP_000272799.1;Parent=gene-STY7866_RS05485;Dbxref=Genbank:WP_000272799.1;Name=WP_000272799.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272794.1;locus_tag=STY7866_RS05485;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272799.1;transl_table=11
NZ_CAAR01000146.1	RefSeq	gene	1240	1965	.	+	.	ID=gene-STY7866_RS05490;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=STY7866_RS05490
NZ_CAAR01000146.1	Protein Homology	CDS	1240	1965	.	+	0	ID=cds-WP_000631369.1;Parent=gene-STY7866_RS05490;Dbxref=Genbank:WP_000631369.1;Name=WP_000631369.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020457015.1;locus_tag=STY7866_RS05490;product=glutamate/aspartate ABC transporter ATP binding protein GltL;protein_id=WP_000631369.1;transl_table=11
NZ_CAAR01000146.1	RefSeq	gene	2082	3017	.	+	.	ID=gene-STY7866_RS05495;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=STY7866_RS05495
NZ_CAAR01000146.1	Protein Homology	CDS	2082	3017	.	+	0	ID=cds-WP_001207423.1;Parent=gene-STY7866_RS05495;Dbxref=Genbank:WP_001207423.1;Name=WP_001207423.1;gbkey=CDS;gene=rihA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455230.1;locus_tag=STY7866_RS05495;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_001207423.1;transl_table=11
NZ_CAAR01000146.1	RefSeq	gene	3136	3429	.	+	.	ID=gene-STY7866_RS05500;Name=STY7866_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05500
NZ_CAAR01000146.1	Protein Homology	CDS	3136	3429	.	+	0	ID=cds-WP_001785127.1;Parent=gene-STY7866_RS05500;Dbxref=Genbank:WP_001785127.1;Name=WP_001785127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001785127.1;locus_tag=STY7866_RS05500;product=hypothetical protein;protein_id=WP_001785127.1;transl_table=11
NZ_CAAR01000146.1	RefSeq	gene	3468	3941	.	-	.	ID=gene-STY7866_RS05505;Name=STY7866_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05505
NZ_CAAR01000146.1	Protein Homology	CDS	3468	3941	.	-	0	ID=cds-WP_001044885.1;Parent=gene-STY7866_RS05505;Dbxref=Genbank:WP_001044885.1;Name=WP_001044885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455229.1;locus_tag=STY7866_RS05505;product=zinc ribbon-containing protein;protein_id=WP_001044885.1;transl_table=11
NZ_CAAR01000146.1	RefSeq	gene	4034	5962	.	-	.	ID=gene-STY7866_RS05510;Name=STY7866_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05510
NZ_CAAR01000146.1	Protein Homology	CDS	4034	5962	.	-	0	ID=cds-WP_001044179.1;Parent=gene-STY7866_RS05510;Dbxref=Genbank:WP_001044179.1;Name=WP_001044179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455228.1;locus_tag=STY7866_RS05510;product=sigma-54-dependent transcriptional regulator;protein_id=WP_001044179.1;transl_table=11
NZ_CAAR01000146.1	RefSeq	pseudogene	6030	6587	.	-	.	ID=gene-STY7866_RS05515;Name=STY7866_RS05515;end_range=6587,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS05515;partial=true;pseudo=true
NZ_CAAR01000146.1	Protein Homology	CDS	6030	6587	.	-	0	ID=cds-STY7866_RS05515;Parent=gene-STY7866_RS05515;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6587,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455227.1;locus_tag=STY7866_RS05515;partial=true;product=2-keto-3-deoxygluconate permease 2;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000145.1 1 1355
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000145.1	RefSeq	region	1	1355	.	+	.	ID=NZ_CAAR01000145.1:1..1355;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000145.1	RefSeq	gene	61	987	.	+	.	ID=gene-STY7866_RS05475;Name=STY7866_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05475
NZ_CAAR01000145.1	Protein Homology	CDS	61	987	.	+	0	ID=cds-WP_000588826.1;Parent=gene-STY7866_RS05475;Dbxref=Genbank:WP_000588826.1;Name=WP_000588826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455234.1;locus_tag=STY7866_RS05475;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_000588826.1;transl_table=11
NZ_CAAR01000145.1	RefSeq	pseudogene	1147	1355	.	+	.	ID=gene-STY7866_RS26945;Name=STY7866_RS26945;end_range=1355,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26945;partial=true;pseudo=true
NZ_CAAR01000145.1	Protein Homology	CDS	1147	1355	.	+	0	ID=cds-STY7866_RS26945;Parent=gene-STY7866_RS26945;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=1355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455233.1;locus_tag=STY7866_RS26945;partial=true;product=amino acid ABC transporter permease;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000144.1 1 12330
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000144.1	RefSeq	region	1	12330	.	+	.	ID=NZ_CAAR01000144.1:1..12330;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000144.1	RefSeq	pseudogene	1	198	.	-	.	ID=gene-STY7866_RS05405;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=pseudogene;locus_tag=STY7866_RS05405;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000144.1	Protein Homology	CDS	1	198	.	-	0	ID=cds-STY7866_RS05405;Parent=gene-STY7866_RS05405;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457280.1;locus_tag=STY7866_RS05405;partial=true;product=type III secretion system translocator chaperone SicA;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000144.1	RefSeq	gene	336	1406	.	-	.	ID=gene-STY7866_RS05410;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=STY7866_RS05410
NZ_CAAR01000144.1	Protein Homology	CDS	336	1406	.	-	0	ID=cds-WP_000097721.1;Parent=gene-STY7866_RS05410;Dbxref=Genbank:WP_000097721.1;Name=WP_000097721.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457281.1;locus_tag=STY7866_RS05410;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=WP_000097721.1;transl_table=11
NZ_CAAR01000144.1	RefSeq	gene	1393	2184	.	-	.	ID=gene-STY7866_RS05415;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=STY7866_RS05415
NZ_CAAR01000144.1	Protein Homology	CDS	1393	2184	.	-	0	ID=cds-WP_000964941.1;Parent=gene-STY7866_RS05415;Dbxref=Genbank:WP_000964941.1;Name=WP_000964941.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457282.1;locus_tag=STY7866_RS05415;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WP_000964941.1;transl_table=11
NZ_CAAR01000144.1	RefSeq	gene	2188	2448	.	-	.	ID=gene-STY7866_RS05420;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=STY7866_RS05420
NZ_CAAR01000144.1	Protein Homology	CDS	2188	2448	.	-	0	ID=cds-WP_000342503.1;Parent=gene-STY7866_RS05420;Dbxref=Genbank:WP_000342503.1;Name=WP_000342503.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457283.1;locus_tag=STY7866_RS05420;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WP_000342503.1;transl_table=11
NZ_CAAR01000144.1	RefSeq	gene	2474	3148	.	-	.	ID=gene-STY7866_RS05425;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=STY7866_RS05425
NZ_CAAR01000144.1	Protein Homology	CDS	2474	3148	.	-	0	ID=cds-WP_000526019.1;Parent=gene-STY7866_RS05425;Dbxref=Genbank:WP_000526019.1;Name=WP_000526019.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457284.1;locus_tag=STY7866_RS05425;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WP_000526019.1;transl_table=11
NZ_CAAR01000144.1	RefSeq	gene	3138	4049	.	-	.	ID=gene-STY7866_RS05430;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=STY7866_RS05430
NZ_CAAR01000144.1	Protein Homology	CDS	3138	4049	.	-	0	ID=cds-WP_000058738.1;Parent=gene-STY7866_RS05430;Dbxref=Genbank:WP_000058738.1;Name=WP_000058738.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457285.1;locus_tag=STY7866_RS05430;product=SPI-1 type III secretion system protein SpaO;protein_id=WP_000058738.1;transl_table=11
NZ_CAAR01000144.1	RefSeq	pseudogene	4049	5061	.	-	.	ID=gene-STY7866_RS05435;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=pseudogene;locus_tag=STY7866_RS05435;pseudo=true
NZ_CAAR01000144.1	Protein Homology	CDS	4049	5061	.	-	0	ID=cds-STY7866_RS05435;Parent=gene-STY7866_RS05435;Note=frameshifted;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457286.1;locus_tag=STY7866_RS05435;product=SPI-1 type III secretion system protein SpaN;pseudo=true;transl_table=11
NZ_CAAR01000144.1	RefSeq	gene	5061	5504	.	-	.	ID=gene-STY7866_RS05440;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=STY7866_RS05440
NZ_CAAR01000144.1	Protein Homology	CDS	5061	5504	.	-	0	ID=cds-WP_000555884.1;Parent=gene-STY7866_RS05440;Dbxref=Genbank:WP_000555884.1;Name=WP_000555884.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457287.1;locus_tag=STY7866_RS05440;product=SPI-1 type III secretion system protein SpaM;protein_id=WP_000555884.1;transl_table=11
NZ_CAAR01000144.1	RefSeq	pseudogene	5482	6706	.	-	.	ID=gene-STY7866_RS05445;Name=STY7866_RS05445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS05445;pseudo=true
NZ_CAAR01000144.1	Protein Homology	CDS	5482	6706	.	-	0	ID=cds-STY7866_RS05445;Parent=gene-STY7866_RS05445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001674767.1;locus_tag=STY7866_RS05445;product=FliI/YscN family ATPase;pseudo=true;transl_table=11
NZ_CAAR01000144.1	RefSeq	gene	6774	7181	.	-	.	ID=gene-STY7866_RS05450;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=STY7866_RS05450
NZ_CAAR01000144.1	Protein Homology	CDS	6774	7181	.	-	0	ID=cds-WP_001164066.1;Parent=gene-STY7866_RS05450;Dbxref=Genbank:WP_001164066.1;Name=WP_001164066.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457289.1;locus_tag=STY7866_RS05450;product=SPI-1 type III secretion system chaperone SpaK;protein_id=WP_001164066.1;transl_table=11
NZ_CAAR01000144.1	RefSeq	gene	7205	9262	.	-	.	ID=gene-STY7866_RS05455;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=STY7866_RS05455
NZ_CAAR01000144.1	Protein Homology	CDS	7205	9262	.	-	0	ID=cds-WP_000927219.1;Parent=gene-STY7866_RS05455;Dbxref=Genbank:WP_000927219.1;Name=WP_000927219.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457290.1;locus_tag=STY7866_RS05455;product=type III secretion system export apparatus protein InvA;protein_id=WP_000927219.1;transl_table=11
NZ_CAAR01000144.1	RefSeq	gene	9287	10405	.	-	.	ID=gene-STY7866_RS05460;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=STY7866_RS05460
NZ_CAAR01000144.1	Protein Homology	CDS	9287	10405	.	-	0	ID=cds-WP_000612166.1;Parent=gene-STY7866_RS05460;Dbxref=Genbank:WP_000612166.1;Name=WP_000612166.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457291.1;locus_tag=STY7866_RS05460;product=type III secretion system gatekeeper InvE;protein_id=WP_000612166.1;transl_table=11
NZ_CAAR01000144.1	RefSeq	gene	10402	12090	.	-	.	ID=gene-STY7866_RS05465;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=STY7866_RS05465
NZ_CAAR01000144.1	Protein Homology	CDS	10402	12090	.	-	0	ID=cds-WP_000848103.1;Parent=gene-STY7866_RS05465;Dbxref=Genbank:WP_000848103.1;Name=WP_000848103.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457292.1;locus_tag=STY7866_RS05465;product=type III secretion system outer membrane ring protein InvG;protein_id=WP_000848103.1;transl_table=11
NZ_CAAR01000144.1	RefSeq	pseudogene	12087	12330	.	-	.	ID=gene-STY7866_RS05470;Name=invF;end_range=12330,.;gbkey=Gene;gene=invF;gene_biotype=pseudogene;locus_tag=STY7866_RS05470;partial=true;pseudo=true
NZ_CAAR01000144.1	Protein Homology	CDS	12087	12330	.	-	1	ID=cds-STY7866_RS05470;Parent=gene-STY7866_RS05470;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=12330,.;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457293.1;locus_tag=STY7866_RS05470;partial=true;product=AraC family transcriptional regulator InvF;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000143.1 1 14945
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000143.1	RefSeq	region	1	14945	.	+	.	ID=NZ_CAAR01000143.1:1..14945;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000143.1	RefSeq	pseudogene	1	1025	.	-	.	ID=gene-STY7866_RS05320;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=pseudogene;locus_tag=STY7866_RS05320;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000143.1	Protein Homology	CDS	1	1025	.	-	0	ID=cds-STY7866_RS05320;Parent=gene-STY7866_RS05320;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=ftsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455448.1;locus_tag=STY7866_RS05320;partial=true;product=DNA translocase FtsK;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000143.1	RefSeq	gene	1160	1654	.	-	.	ID=gene-STY7866_RS05325;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=STY7866_RS05325
NZ_CAAR01000143.1	Protein Homology	CDS	1160	1654	.	-	0	ID=cds-WP_000228468.1;Parent=gene-STY7866_RS05325;Dbxref=Genbank:WP_000228468.1;Name=WP_000228468.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455447.1;locus_tag=STY7866_RS05325;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228468.1;transl_table=11
NZ_CAAR01000143.1	RefSeq	gene	2200	3168	.	+	.	ID=gene-STY7866_RS05330;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=STY7866_RS05330
NZ_CAAR01000143.1	Protein Homology	CDS	2200	3168	.	+	0	ID=cds-WP_000537407.1;Parent=gene-STY7866_RS05330;Dbxref=Genbank:WP_000537407.1;Name=WP_000537407.1;gbkey=CDS;gene=trxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455446.1;locus_tag=STY7866_RS05330;product=thioredoxin-disulfide reductase;protein_id=WP_000537407.1;transl_table=11
NZ_CAAR01000143.1	RefSeq	gene	3282	5048	.	+	.	ID=gene-STY7866_RS05335;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=STY7866_RS05335
NZ_CAAR01000143.1	Protein Homology	CDS	3282	5048	.	+	0	ID=cds-WP_001044527.1;Parent=gene-STY7866_RS05335;Dbxref=Genbank:WP_001044527.1;Name=WP_001044527.1;gbkey=CDS;gene=cydD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455445.1;locus_tag=STY7866_RS05335;product=cysteine/glutathione ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001044527.1;transl_table=11
NZ_CAAR01000143.1	RefSeq	gene	5049	6770	.	+	.	ID=gene-STY7866_RS05340;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=STY7866_RS05340
NZ_CAAR01000143.1	Protein Homology	CDS	5049	6770	.	+	0	ID=cds-WP_001202266.1;Parent=gene-STY7866_RS05340;Dbxref=Genbank:WP_001202266.1;Name=WP_001202266.1;gbkey=CDS;gene=cydC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455444.1;locus_tag=STY7866_RS05340;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202266.1;transl_table=11
NZ_CAAR01000143.1	RefSeq	pseudogene	6815	7518	.	+	.	ID=gene-STY7866_RS05345;Name=STY7866_RS05345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS05345;pseudo=true
NZ_CAAR01000143.1	Protein Homology	CDS	6815	7518	.	+	0	ID=cds-STY7866_RS05345;Parent=gene-STY7866_RS05345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455443.1;locus_tag=STY7866_RS05345;product=leucyl/phenylalanyl-tRNA--protein transferase;pseudo=true;transl_table=11
NZ_CAAR01000143.1	RefSeq	gene	7515	7901	.	+	.	ID=gene-STY7866_RS05350;Name=STY7866_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05350
NZ_CAAR01000143.1	Protein Homology	CDS	7515	7901	.	+	0	ID=cds-WP_031626191.1;Parent=gene-STY7866_RS05350;Dbxref=Genbank:WP_031626191.1;Name=WP_031626191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459930.1;locus_tag=STY7866_RS05350;product=hypothetical protein;protein_id=WP_031626191.1;transl_table=11
NZ_CAAR01000143.1	RefSeq	gene	7829	8047	.	+	.	ID=gene-STY7866_RS05355;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=STY7866_RS05355
NZ_CAAR01000143.1	Protein Homology	CDS	7829	8047	.	+	0	ID=cds-WP_001040187.1;Parent=gene-STY7866_RS05355;Dbxref=Genbank:WP_001040187.1;Name=WP_001040187.1;gbkey=CDS;gene=infA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=STY7866_RS05355;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11
NZ_CAAR01000143.1	RefSeq	gene	8138	9049	.	-	.	ID=gene-STY7866_RS05360;Name=STY7866_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05360
NZ_CAAR01000143.1	Protein Homology	CDS	8138	9049	.	-	0	ID=cds-WP_000597928.1;Parent=gene-STY7866_RS05360;Dbxref=Genbank:WP_000597928.1;Name=WP_000597928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455441.1;locus_tag=STY7866_RS05360;product=LysR family transcriptional regulator;protein_id=WP_000597928.1;transl_table=11
NZ_CAAR01000143.1	RefSeq	gene	9158	10018	.	+	.	ID=gene-STY7866_RS05365;Name=STY7866_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05365
NZ_CAAR01000143.1	Protein Homology	CDS	9158	10018	.	+	0	ID=cds-WP_000809962.1;Parent=gene-STY7866_RS05365;Dbxref=Genbank:WP_000809962.1;Name=WP_000809962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455440.1;locus_tag=STY7866_RS05365;product=pirin family protein;protein_id=WP_000809962.1;transl_table=11
NZ_CAAR01000143.1	RefSeq	gene	10038	10715	.	+	.	ID=gene-STY7866_RS05370;Name=STY7866_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05370
NZ_CAAR01000143.1	Protein Homology	CDS	10038	10715	.	+	0	ID=cds-WP_000097901.1;Parent=gene-STY7866_RS05370;Dbxref=Genbank:WP_000097901.1;Name=WP_000097901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455439.1;locus_tag=STY7866_RS05370;product=hydrolase;protein_id=WP_000097901.1;transl_table=11
NZ_CAAR01000143.1	RefSeq	gene	10864	10951	.	+	.	ID=gene-STY7866_RS05375;Name=STY7866_RS05375;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS05375
NZ_CAAR01000143.1	tRNAscan-SE	tRNA	10864	10951	.	+	.	ID=rna-STY7866_RS05375;Parent=gene-STY7866_RS05375;anticodon=(pos:10898..10900);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS05375;product=tRNA-Ser
NZ_CAAR01000143.1	tRNAscan-SE	exon	10864	10951	.	+	.	ID=exon-STY7866_RS05375-1;Parent=rna-STY7866_RS05375;anticodon=(pos:10898..10900);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS05375;product=tRNA-Ser
NZ_CAAR01000143.1	RefSeq	gene	11310	11687	.	+	.	ID=gene-STY7866_RS05385;Name=STY7866_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05385
NZ_CAAR01000143.1	Protein Homology	CDS	11310	11687	.	+	0	ID=cds-WP_001539594.1;Parent=gene-STY7866_RS05385;Dbxref=Genbank:WP_001539594.1;Name=WP_001539594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535855.1;locus_tag=STY7866_RS05385;product=integrase;protein_id=WP_001539594.1;transl_table=11
NZ_CAAR01000143.1	RefSeq	gene	11849	12046	.	+	.	ID=gene-STY7866_RS05390;Name=STY7866_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05390
NZ_CAAR01000143.1	Protein Homology	CDS	11849	12046	.	+	0	ID=cds-WP_001117984.1;Parent=gene-STY7866_RS05390;Dbxref=Genbank:WP_001117984.1;Name=WP_001117984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111984.1;locus_tag=STY7866_RS05390;product=hypothetical protein;protein_id=WP_001117984.1;transl_table=11
NZ_CAAR01000143.1	RefSeq	pseudogene	12258	14535	.	-	.	ID=gene-STY7866_RS05395;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=pseudogene;locus_tag=STY7866_RS05395;pseudo=true
NZ_CAAR01000143.1	Protein Homology	CDS	12258	14535	.	-	0	ID=cds-STY7866_RS05395;Parent=gene-STY7866_RS05395;Note=frameshifted;gbkey=CDS;gene=clpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455435.1;locus_tag=STY7866_RS05395;product=ATP-dependent Clp protease ATP-binding subunit ClpA;pseudo=true;transl_table=11
NZ_CAAR01000143.1	RefSeq	gene	14566	14886	.	-	.	ID=gene-STY7866_RS05400;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=STY7866_RS05400
NZ_CAAR01000143.1	Protein Homology	CDS	14566	14886	.	-	0	ID=cds-WP_000520789.1;Parent=gene-STY7866_RS05400;Dbxref=Genbank:WP_000520789.1;Name=WP_000520789.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=STY7866_RS05400;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520789.1;transl_table=11
##sequence-region NZ_CAAR01000142.1 1 3479
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000142.1	RefSeq	region	1	3479	.	+	.	ID=NZ_CAAR01000142.1:1..3479;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000142.1	RefSeq	gene	430	2424	.	-	.	ID=gene-STY7866_RS05310;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=STY7866_RS05310
NZ_CAAR01000142.1	Protein Homology	CDS	430	2424	.	-	0	ID=cds-WP_001241572.1;Parent=gene-STY7866_RS05310;Dbxref=Genbank:WP_001241572.1;Name=WP_001241572.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458624.1;locus_tag=STY7866_RS05310;product=DNA topoisomerase III;protein_id=WP_001241572.1;transl_table=11
NZ_CAAR01000142.1	RefSeq	pseudogene	2535	3313	.	-	.	ID=gene-STY7866_RS05315;Name=STY7866_RS05315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS05315;pseudo=true
NZ_CAAR01000142.1	Protein Homology	CDS	2535	3313	.	-	0	ID=cds-STY7866_RS05315;Parent=gene-STY7866_RS05315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458623.1;locus_tag=STY7866_RS05315;product=TIGR03761 family integrating conjugative element protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000141.1 1 2312
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000141.1	RefSeq	region	1	2312	.	+	.	ID=NZ_CAAR01000141.1:1..2312;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000141.1	RefSeq	gene	476	1396	.	-	.	ID=gene-STY7866_RS05305;Name=STY7866_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05305
NZ_CAAR01000141.1	Protein Homology	CDS	476	1396	.	-	0	ID=cds-WP_000907593.1;Parent=gene-STY7866_RS05305;Dbxref=Genbank:WP_000907593.1;Name=WP_000907593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458670.1;locus_tag=STY7866_RS05305;product=DNA-binding protein;protein_id=WP_000907593.1;transl_table=11
NZ_CAAR01000141.1	RefSeq	gene	1724	1918	.	-	.	ID=gene-STY7866_RS26940;Name=STY7866_RS26940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26940
NZ_CAAR01000141.1	Protein Homology	CDS	1724	1918	.	-	0	ID=cds-WP_001763960.1;Parent=gene-STY7866_RS26940;Dbxref=Genbank:WP_001763960.1;Name=WP_001763960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001763960.1;locus_tag=STY7866_RS26940;product=hypothetical protein;protein_id=WP_001763960.1;transl_table=11
##sequence-region NZ_CAAR01000140.1 1 5426
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000140.1	RefSeq	region	1	5426	.	+	.	ID=NZ_CAAR01000140.1:1..5426;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000140.1	RefSeq	gene	521	1129	.	-	.	ID=gene-STY7866_RS05275;Name=STY7866_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05275
NZ_CAAR01000140.1	Protein Homology	CDS	521	1129	.	-	0	ID=cds-WP_000864871.1;Parent=gene-STY7866_RS05275;Dbxref=Genbank:WP_000864871.1;Name=WP_000864871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458927.1;locus_tag=STY7866_RS05275;product=DUF1062 domain-containing protein;protein_id=WP_000864871.1;transl_table=11
NZ_CAAR01000140.1	RefSeq	gene	1618	1875	.	+	.	ID=gene-STY7866_RS05280;Name=STY7866_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05280
NZ_CAAR01000140.1	Protein Homology	CDS	1618	1875	.	+	0	ID=cds-WP_001054380.1;Parent=gene-STY7866_RS05280;Dbxref=Genbank:WP_001054380.1;Name=WP_001054380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458926.1;locus_tag=STY7866_RS05280;product=hypothetical protein;protein_id=WP_001054380.1;transl_table=11
NZ_CAAR01000140.1	RefSeq	gene	1880	3511	.	+	.	ID=gene-STY7866_RS05285;Name=STY7866_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05285
NZ_CAAR01000140.1	Protein Homology	CDS	1880	3511	.	+	0	ID=cds-WP_001681527.1;Parent=gene-STY7866_RS05285;Dbxref=Genbank:WP_001681527.1;Name=WP_001681527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=STY7866_RS05285;product=SAM-dependent methyltransferase;protein_id=WP_001681527.1;transl_table=11
NZ_CAAR01000140.1	RefSeq	pseudogene	3915	4639	.	+	.	ID=gene-STY7866_RS05290;Name=STY7866_RS05290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS05290;pseudo=true
NZ_CAAR01000140.1	Protein Homology	CDS	3915	4639	.	+	0	ID=cds-STY7866_RS05290;Parent=gene-STY7866_RS05290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458924.3;locus_tag=STY7866_RS05290;product=YebC/PmpR family DNA-binding transcriptional regulator;pseudo=true;transl_table=11
NZ_CAAR01000140.1	RefSeq	pseudogene	5120	5426	.	-	.	ID=gene-STY7866_RS05300;Name=STY7866_RS05300;end_range=5426,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS05300;partial=true;pseudo=true
NZ_CAAR01000140.1	Protein Homology	CDS	5120	5426	.	-	1	ID=cds-STY7866_RS05300;Parent=gene-STY7866_RS05300;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5426,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458922.1;locus_tag=STY7866_RS05300;partial=true;product=HNH endonuclease;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000139.1 1 9253
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000139.1	RefSeq	region	1	9253	.	+	.	ID=NZ_CAAR01000139.1:1..9253;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000139.1	RefSeq	gene	1	297	.	+	.	ID=gene-STY7866_RS05220;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=STY7866_RS05220
NZ_CAAR01000139.1	Protein Homology	CDS	1	297	.	+	0	ID=cds-WP_031626190.1;Parent=gene-STY7866_RS05220;Dbxref=Genbank:WP_031626190.1;Name=WP_031626190.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455606.1;locus_tag=STY7866_RS05220;product=chaperone modulator CbpM;protein_id=WP_031626190.1;transl_table=11
NZ_CAAR01000139.1	RefSeq	gene	951	1313	.	+	.	ID=gene-STY7866_RS05230;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=STY7866_RS05230
NZ_CAAR01000139.1	Protein Homology	CDS	951	1313	.	+	0	ID=cds-WP_001537781.1;Parent=gene-STY7866_RS05230;Dbxref=Genbank:WP_001537781.1;Name=WP_001537781.1;gbkey=CDS;gene=iraM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=STY7866_RS05230;product=anti-adapter protein IraM;protein_id=WP_001537781.1;transl_table=11
NZ_CAAR01000139.1	RefSeq	gene	1721	2659	.	-	.	ID=gene-STY7866_RS05235;Name=STY7866_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05235
NZ_CAAR01000139.1	Protein Homology	CDS	1721	2659	.	-	0	ID=cds-WP_000976557.1;Parent=gene-STY7866_RS05235;Dbxref=Genbank:WP_000976557.1;Name=WP_000976557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455605.1;locus_tag=STY7866_RS05235;product=MBL fold metallo-hydrolase;protein_id=WP_000976557.1;transl_table=11
NZ_CAAR01000139.1	RefSeq	gene	2673	3569	.	-	.	ID=gene-STY7866_RS05240;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=STY7866_RS05240
NZ_CAAR01000139.1	Protein Homology	CDS	2673	3569	.	-	0	ID=cds-WP_000336599.1;Parent=gene-STY7866_RS05240;Dbxref=Genbank:WP_000336599.1;Name=WP_000336599.1;gbkey=CDS;gene=hpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455604.1;locus_tag=STY7866_RS05240;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000336599.1;transl_table=11
NZ_CAAR01000139.1	RefSeq	gene	3579	4955	.	-	.	ID=gene-STY7866_RS05245;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=STY7866_RS05245
NZ_CAAR01000139.1	Protein Homology	CDS	3579	4955	.	-	0	ID=cds-WP_001285789.1;Parent=gene-STY7866_RS05245;Dbxref=Genbank:WP_001285789.1;Name=WP_001285789.1;gbkey=CDS;gene=hpaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455603.1;locus_tag=STY7866_RS05245;product=4-hydroxyphenylacetate permease;protein_id=WP_001285789.1;transl_table=11
NZ_CAAR01000139.1	RefSeq	pseudogene	5027	5817	.	-	.	ID=gene-STY7866_RS05250;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=pseudogene;locus_tag=STY7866_RS05250;pseudo=true
NZ_CAAR01000139.1	Protein Homology	CDS	5027	5817	.	-	0	ID=cds-STY7866_RS05250;Parent=gene-STY7866_RS05250;Note=frameshifted;gbkey=CDS;gene=hpaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455602.1;locus_tag=STY7866_RS05250;product=4-hydroxy-2-oxoheptanedioate aldolase;pseudo=true;transl_table=11
NZ_CAAR01000139.1	RefSeq	gene	5828	6631	.	-	.	ID=gene-STY7866_RS05255;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=STY7866_RS05255
NZ_CAAR01000139.1	Protein Homology	CDS	5828	6631	.	-	0	ID=cds-WP_000884795.1;Parent=gene-STY7866_RS05255;Dbxref=Genbank:WP_000884795.1;Name=WP_000884795.1;gbkey=CDS;gene=hpaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455601.1;locus_tag=STY7866_RS05255;product=2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase;protein_id=WP_000884795.1;transl_table=11
NZ_CAAR01000139.1	RefSeq	gene	6775	7155	.	-	.	ID=gene-STY7866_RS05260;Name=STY7866_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05260
NZ_CAAR01000139.1	Protein Homology	CDS	6775	7155	.	-	0	ID=cds-WP_001119858.1;Parent=gene-STY7866_RS05260;Dbxref=Genbank:WP_001119858.1;Name=WP_001119858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455600.1;locus_tag=STY7866_RS05260;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119858.1;transl_table=11
NZ_CAAR01000139.1	RefSeq	gene	7165	8016	.	-	.	ID=gene-STY7866_RS05265;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=STY7866_RS05265
NZ_CAAR01000139.1	Protein Homology	CDS	7165	8016	.	-	0	ID=cds-WP_000516973.1;Parent=gene-STY7866_RS05265;Dbxref=Genbank:WP_000516973.1;Name=WP_000516973.1;gbkey=CDS;gene=hpaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455599.1;locus_tag=STY7866_RS05265;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516973.1;transl_table=11
NZ_CAAR01000139.1	RefSeq	pseudogene	8018	9253	.	-	.	ID=gene-STY7866_RS05270;Name=hpaE;end_range=9253,.;gbkey=Gene;gene=hpaE;gene_biotype=pseudogene;locus_tag=STY7866_RS05270;partial=true;pseudo=true
NZ_CAAR01000139.1	Protein Homology	CDS	8018	9253	.	-	1	ID=cds-STY7866_RS05270;Parent=gene-STY7866_RS05270;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=9253,.;gbkey=CDS;gene=hpaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=STY7866_RS05270;partial=true;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000138.1 1 7029
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000138.1	RefSeq	region	1	7029	.	+	.	ID=NZ_CAAR01000138.1:1..7029;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000138.1	RefSeq	gene	1	620	.	+	.	ID=gene-STY7866_RS05175;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=STY7866_RS05175;partial=true;start_range=.,1
NZ_CAAR01000138.1	Protein Homology	CDS	1	620	.	+	2	ID=cds-WP_000530257.1;Parent=gene-STY7866_RS05175;Dbxref=Genbank:WP_000530257.1;Name=WP_000530257.1;gbkey=CDS;gene=ispD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457319.1;locus_tag=STY7866_RS05175;partial=true;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000530257.1;start_range=.,1;transl_table=11
NZ_CAAR01000138.1	RefSeq	gene	620	1099	.	+	.	ID=gene-STY7866_RS05180;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=STY7866_RS05180
NZ_CAAR01000138.1	Protein Homology	CDS	620	1099	.	+	0	ID=cds-WP_001219244.1;Parent=gene-STY7866_RS05180;Dbxref=Genbank:WP_001219244.1;Name=WP_001219244.1;gbkey=CDS;gene=ispF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457318.1;locus_tag=STY7866_RS05180;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219244.1;transl_table=11
NZ_CAAR01000138.1	RefSeq	gene	1096	2145	.	+	.	ID=gene-STY7866_RS05185;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=STY7866_RS05185
NZ_CAAR01000138.1	Protein Homology	CDS	1096	2145	.	+	0	ID=cds-WP_000134253.1;Parent=gene-STY7866_RS05185;Dbxref=Genbank:WP_000134253.1;Name=WP_000134253.1;gbkey=CDS;gene=truD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457317.1;locus_tag=STY7866_RS05185;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000134253.1;transl_table=11
NZ_CAAR01000138.1	RefSeq	gene	2126	2887	.	+	.	ID=gene-STY7866_RS05190;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=STY7866_RS05190
NZ_CAAR01000138.1	Protein Homology	CDS	2126	2887	.	+	0	ID=cds-WP_001221538.1;Parent=gene-STY7866_RS05190;Dbxref=Genbank:WP_001221538.1;Name=WP_001221538.1;gbkey=CDS;gene=surE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457316.1;locus_tag=STY7866_RS05190;product=5'/3'-nucleotidase SurE;protein_id=WP_001221538.1;transl_table=11
NZ_CAAR01000138.1	RefSeq	gene	2881	3507	.	+	.	ID=gene-STY7866_RS05195;Name=STY7866_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05195
NZ_CAAR01000138.1	Protein Homology	CDS	2881	3507	.	+	0	ID=cds-WP_000253542.1;Parent=gene-STY7866_RS05195;Dbxref=Genbank:WP_000253542.1;Name=WP_000253542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=STY7866_RS05195;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_000253542.1;transl_table=11
NZ_CAAR01000138.1	RefSeq	pseudogene	3683	4805	.	+	.	ID=gene-STY7866_RS05200;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=pseudogene;locus_tag=STY7866_RS05200;pseudo=true
NZ_CAAR01000138.1	Protein Homology	CDS	3683	4805	.	+	0	ID=cds-STY7866_RS05200;Parent=gene-STY7866_RS05200;Note=frameshifted;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457314.1;locus_tag=STY7866_RS05200;product=murein hydrolase activator NlpD;pseudo=true;transl_table=11
NZ_CAAR01000138.1	RefSeq	gene	4868	5860	.	+	.	ID=gene-STY7866_RS05205;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=STY7866_RS05205
NZ_CAAR01000138.1	Protein Homology	CDS	4868	5860	.	+	0	ID=cds-WP_000081498.1;Parent=gene-STY7866_RS05205;Dbxref=Genbank:WP_000081498.1;Name=WP_000081498.1;gbkey=CDS;gene=rpoS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=STY7866_RS05205;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081498.1;transl_table=11
NZ_CAAR01000138.1	RefSeq	gene	5905	6141	.	-	.	ID=gene-STY7866_RS05210;Name=STY7866_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05210
NZ_CAAR01000138.1	Protein Homology	CDS	5905	6141	.	-	0	ID=cds-WP_000562964.1;Parent=gene-STY7866_RS05210;Dbxref=Genbank:WP_000562964.1;Name=WP_000562964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457312.1;locus_tag=STY7866_RS05210;product=hypothetical protein;protein_id=WP_000562964.1;transl_table=11
NZ_CAAR01000138.1	RefSeq	gene	6152	7029	.	-	.	ID=gene-STY7866_RS05215;Name=STY7866_RS05215;end_range=7029,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05215;partial=true
NZ_CAAR01000138.1	Protein Homology	CDS	6152	7029	.	-	2	ID=cds-WP_000507880.1;Parent=gene-STY7866_RS05215;Dbxref=Genbank:WP_000507880.1;Name=WP_000507880.1;end_range=7029,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457311.1;locus_tag=STY7866_RS05215;partial=true;product=UbiD family decarboxylase;protein_id=WP_000507880.1;transl_table=11
##sequence-region NZ_CAAR01000137.1 1 8969
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000137.1	RefSeq	region	1	8969	.	+	.	ID=NZ_CAAR01000137.1:1..8969;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000137.1	RefSeq	gene	1	386	.	+	.	ID=gene-STY7866_RS05140;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=STY7866_RS05140;partial=true;start_range=.,1
NZ_CAAR01000137.1	Protein Homology	CDS	1	386	.	+	2	ID=cds-WP_000463410.1;Parent=gene-STY7866_RS05140;Dbxref=Genbank:WP_000463410.1;Name=WP_000463410.1;gbkey=CDS;gene=kdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455474.1;locus_tag=STY7866_RS05140;partial=true;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000463410.1;start_range=.,1;transl_table=11
NZ_CAAR01000137.1	RefSeq	gene	597	1490	.	+	.	ID=gene-STY7866_RS05145;Name=STY7866_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05145
NZ_CAAR01000137.1	Protein Homology	CDS	597	1490	.	+	0	ID=cds-WP_000436890.1;Parent=gene-STY7866_RS05145;Dbxref=Genbank:WP_000436890.1;Name=WP_000436890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455475.1;locus_tag=STY7866_RS05145;product=YcbJ family phosphotransferase;protein_id=WP_000436890.1;transl_table=11
NZ_CAAR01000137.1	RefSeq	gene	1470	2246	.	-	.	ID=gene-STY7866_RS05150;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=STY7866_RS05150
NZ_CAAR01000137.1	Protein Homology	CDS	1470	2246	.	-	0	ID=cds-WP_000899546.1;Parent=gene-STY7866_RS05150;Dbxref=Genbank:WP_000899546.1;Name=WP_000899546.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455476.1;locus_tag=STY7866_RS05150;product=envelope biogenesis factor ElyC;protein_id=WP_000899546.1;transl_table=11
NZ_CAAR01000137.1	RefSeq	gene	2382	3185	.	+	.	ID=gene-STY7866_RS05155;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=STY7866_RS05155
NZ_CAAR01000137.1	Protein Homology	CDS	2382	3185	.	+	0	ID=cds-WP_001154025.1;Parent=gene-STY7866_RS05155;Dbxref=Genbank:WP_001154025.1;Name=WP_001154025.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455477.1;locus_tag=STY7866_RS05155;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001154025.1;transl_table=11
NZ_CAAR01000137.1	RefSeq	gene	3178	4500	.	+	.	ID=gene-STY7866_RS05160;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=STY7866_RS05160
NZ_CAAR01000137.1	Protein Homology	CDS	3178	4500	.	+	0	ID=cds-WP_001288827.1;Parent=gene-STY7866_RS05160;Dbxref=Genbank:WP_001288827.1;Name=WP_001288827.1;gbkey=CDS;gene=mukF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=STY7866_RS05160;product=chromosome partition protein MukF;protein_id=WP_001288827.1;transl_table=11
NZ_CAAR01000137.1	RefSeq	gene	4481	5185	.	+	.	ID=gene-STY7866_RS05165;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=STY7866_RS05165
NZ_CAAR01000137.1	Protein Homology	CDS	4481	5185	.	+	0	ID=cds-WP_000060025.1;Parent=gene-STY7866_RS05165;Dbxref=Genbank:WP_000060025.1;Name=WP_000060025.1;gbkey=CDS;gene=mukE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=STY7866_RS05165;product=chromosome partition protein MukE;protein_id=WP_000060025.1;transl_table=11
NZ_CAAR01000137.1	RefSeq	pseudogene	5185	8969	.	+	.	ID=gene-STY7866_RS05170;Name=mukB;end_range=8969,.;gbkey=Gene;gene=mukB;gene_biotype=pseudogene;locus_tag=STY7866_RS05170;partial=true;pseudo=true
NZ_CAAR01000137.1	Protein Homology	CDS	5185	8969	.	+	0	ID=cds-STY7866_RS05170;Parent=gene-STY7866_RS05170;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=8969,.;gbkey=CDS;gene=mukB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455480.1;locus_tag=STY7866_RS05170;partial=true;product=chromosome partition protein MukB;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000136.1 1 4943
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000136.1	RefSeq	region	1	4943	.	+	.	ID=NZ_CAAR01000136.1:1..4943;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000136.1	RefSeq	pseudogene	1	85	.	+	.	ID=gene-STY7866_RS05100;Name=recX;gbkey=Gene;gene=recX;gene_biotype=pseudogene;locus_tag=STY7866_RS05100;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000136.1	Protein Homology	CDS	1	85	.	+	1	ID=cds-STY7866_RS05100;Parent=gene-STY7866_RS05100;Note=binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457221.1;locus_tag=STY7866_RS05100;partial=true;product=recombination regulator RecX;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000136.1	RefSeq	gene	82	288	.	+	.	ID=gene-STY7866_RS26935;Name=STY7866_RS26935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26935
NZ_CAAR01000136.1	Protein Homology	CDS	82	288	.	+	0	ID=cds-WP_001277278.1;Parent=gene-STY7866_RS26935;Dbxref=Genbank:WP_001277278.1;Name=WP_001277278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277278.1;locus_tag=STY7866_RS26935;product=hypothetical protein;protein_id=WP_001277278.1;transl_table=11
NZ_CAAR01000136.1	RefSeq	gene	321	2951	.	+	.	ID=gene-STY7866_RS05105;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=STY7866_RS05105
NZ_CAAR01000136.1	Protein Homology	CDS	321	2951	.	+	0	ID=cds-WP_000047238.1;Parent=gene-STY7866_RS05105;Dbxref=Genbank:WP_000047238.1;Name=WP_000047238.1;gbkey=CDS;gene=alaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457220.1;locus_tag=STY7866_RS05105;product=alanine--tRNA ligase;protein_id=WP_000047238.1;transl_table=11
NZ_CAAR01000136.1	RefSeq	gene	3186	3371	.	+	.	ID=gene-STY7866_RS05110;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=STY7866_RS05110
NZ_CAAR01000136.1	Protein Homology	CDS	3186	3371	.	+	0	ID=cds-WP_000906486.1;Parent=gene-STY7866_RS05110;Dbxref=Genbank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=STY7866_RS05110;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11
NZ_CAAR01000136.1	RefSeq	gene	3675	3767	.	+	.	ID=gene-STY7866_RS05115;Name=STY7866_RS05115;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS05115
NZ_CAAR01000136.1	tRNAscan-SE	tRNA	3675	3767	.	+	.	ID=rna-STY7866_RS05115;Parent=gene-STY7866_RS05115;anticodon=(pos:3709..3711);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS05115;product=tRNA-Ser
NZ_CAAR01000136.1	tRNAscan-SE	exon	3675	3767	.	+	.	ID=exon-STY7866_RS05115-1;Parent=rna-STY7866_RS05115;anticodon=(pos:3709..3711);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS05115;product=tRNA-Ser
NZ_CAAR01000136.1	RefSeq	gene	3771	3848	.	+	.	ID=gene-STY7866_RS05120;Name=STY7866_RS05120;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS05120
NZ_CAAR01000136.1	tRNAscan-SE	tRNA	3771	3848	.	+	.	ID=rna-STY7866_RS05120;Parent=gene-STY7866_RS05120;anticodon=(pos:3806..3808);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS05120;product=tRNA-Arg
NZ_CAAR01000136.1	tRNAscan-SE	exon	3771	3848	.	+	.	ID=exon-STY7866_RS05120-1;Parent=rna-STY7866_RS05120;anticodon=(pos:3806..3808);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS05120;product=tRNA-Arg
NZ_CAAR01000136.1	RefSeq	gene	3911	3987	.	+	.	ID=gene-STY7866_RS05125;Name=STY7866_RS05125;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS05125
NZ_CAAR01000136.1	tRNAscan-SE	tRNA	3911	3987	.	+	.	ID=rna-STY7866_RS05125;Parent=gene-STY7866_RS05125;anticodon=(pos:3945..3947);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS05125;product=tRNA-Arg
NZ_CAAR01000136.1	tRNAscan-SE	exon	3911	3987	.	+	.	ID=exon-STY7866_RS05125-1;Parent=rna-STY7866_RS05125;anticodon=(pos:3945..3947);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS05125;product=tRNA-Arg
NZ_CAAR01000136.1	RefSeq	gene	4184	4260	.	+	.	ID=gene-STY7866_RS05130;Name=STY7866_RS05130;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS05130
NZ_CAAR01000136.1	tRNAscan-SE	tRNA	4184	4260	.	+	.	ID=rna-STY7866_RS05130;Parent=gene-STY7866_RS05130;anticodon=(pos:4218..4220);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS05130;product=tRNA-Arg
NZ_CAAR01000136.1	tRNAscan-SE	exon	4184	4260	.	+	.	ID=exon-STY7866_RS05130-1;Parent=rna-STY7866_RS05130;anticodon=(pos:4218..4220);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS05130;product=tRNA-Arg
NZ_CAAR01000136.1	RefSeq	gene	4497	4943	.	+	.	ID=gene-STY7866_RS05135;Name=yqaB;end_range=4943,.;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=STY7866_RS05135;partial=true
NZ_CAAR01000136.1	Protein Homology	CDS	4497	4943	.	+	0	ID=cds-WP_000271290.1;Parent=gene-STY7866_RS05135;Dbxref=Genbank:WP_000271290.1;Name=WP_000271290.1;end_range=4943,.;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457218.1;locus_tag=STY7866_RS05135;partial=true;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000271290.1;transl_table=11
##sequence-region NZ_CAAR01000135.1 1 4772
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000135.1	RefSeq	region	1	4772	.	+	.	ID=NZ_CAAR01000135.1:1..4772;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000135.1	RefSeq	pseudogene	4	153	.	-	.	ID=gene-STY7866_RS26925;Name=STY7866_RS26925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26925;partial=true;pseudo=true;start_range=.,4
NZ_CAAR01000135.1	Protein Homology	CDS	4	153	.	-	0	ID=cds-STY7866_RS26925;Parent=gene-STY7866_RS26925;Note=PhnO in Salmonella enterica catalyzes the acetylation of a range of aminoalkylphosphonic acids%3B part of the biochemical pathway that enables the cell to use phosphonates as a phosphorus source%3B Escherichia coli uses a different mechanism of phosphonate catabolism where PhnO is not essential and seems to play a regulatory role%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458586.1;locus_tag=STY7866_RS26925;partial=true;product=aminoalkylphosphonic acid N-acetyltransferase;pseudo=true;start_range=.,4;transl_table=11
NZ_CAAR01000135.1	RefSeq	gene	275	718	.	-	.	ID=gene-STY7866_RS05070;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=STY7866_RS05070
NZ_CAAR01000135.1	Protein Homology	CDS	275	718	.	-	0	ID=cds-WP_001131301.1;Parent=gene-STY7866_RS05070;Dbxref=Genbank:WP_001131301.1;Name=WP_001131301.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458587.1;locus_tag=STY7866_RS05070;product=VOC family metalloprotein YjdN;protein_id=WP_001131301.1;transl_table=11
NZ_CAAR01000135.1	RefSeq	gene	838	1173	.	-	.	ID=gene-STY7866_RS05075;Name=STY7866_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05075
NZ_CAAR01000135.1	Protein Homology	CDS	838	1173	.	-	0	ID=cds-WP_000056482.1;Parent=gene-STY7866_RS05075;Dbxref=Genbank:WP_000056482.1;Name=WP_000056482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004856597.1;locus_tag=STY7866_RS05075;product=phnA family protein;protein_id=WP_000056482.1;transl_table=11
NZ_CAAR01000135.1	RefSeq	gene	1641	3143	.	+	.	ID=gene-STY7866_RS05080;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=STY7866_RS05080
NZ_CAAR01000135.1	Protein Homology	CDS	1641	3143	.	+	0	ID=cds-WP_000919708.1;Parent=gene-STY7866_RS05080;Dbxref=Genbank:WP_000919708.1;Name=WP_000919708.1;gbkey=CDS;gene=proP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458589.1;locus_tag=STY7866_RS05080;product=glycine betaine/L-proline transporter ProP;protein_id=WP_000919708.1;transl_table=11
NZ_CAAR01000135.1	RefSeq	gene	3213	3302	.	+	.	ID=gene-STY7866_RS26930;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=STY7866_RS26930
NZ_CAAR01000135.1	Protein Homology	CDS	3213	3302	.	+	0	ID=cds-WP_000844399.1;Parent=gene-STY7866_RS26930;Dbxref=Genbank:WP_000844399.1;Name=WP_000844399.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=STY7866_RS26930;product=LpxT activity modulator PmrR;protein_id=WP_000844399.1;transl_table=11
NZ_CAAR01000135.1	RefSeq	gene	3310	4380	.	-	.	ID=gene-STY7866_RS05090;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=STY7866_RS05090
NZ_CAAR01000135.1	Protein Homology	CDS	3310	4380	.	-	0	ID=cds-WP_071525114.1;Parent=gene-STY7866_RS05090;Dbxref=Genbank:WP_071525114.1;Name=WP_071525114.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=STY7866_RS05090;product=two-component system sensor histidine kinase PmrB;protein_id=WP_071525114.1;transl_table=11
NZ_CAAR01000135.1	RefSeq	pseudogene	4390	4772	.	-	.	ID=gene-STY7866_RS05095;Name=STY7866_RS05095;end_range=4772,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS05095;partial=true;pseudo=true
NZ_CAAR01000135.1	Protein Homology	CDS	4390	4772	.	-	2	ID=cds-STY7866_RS05095;Parent=gene-STY7866_RS05095;Note=response regulator in two-component regulatory system with BasS%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4772,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458591.1;locus_tag=STY7866_RS05095;partial=true;product=two-component system response regulator BasR;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000134.1 1 6745
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000134.1	RefSeq	region	1	6745	.	+	.	ID=NZ_CAAR01000134.1:1..6745;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000134.1	RefSeq	gene	1	1233	.	-	.	ID=gene-STY7866_RS05035;Name=STY7866_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05035;partial=true;start_range=.,1
NZ_CAAR01000134.1	Protein Homology	CDS	1	1233	.	-	0	ID=cds-WP_001044600.1;Parent=gene-STY7866_RS05035;Dbxref=Genbank:WP_001044600.1;Name=WP_001044600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455645.1;locus_tag=STY7866_RS05035;partial=true;product=glycosyltransferase;protein_id=WP_001044600.1;start_range=.,1;transl_table=11
NZ_CAAR01000134.1	RefSeq	gene	1226	2761	.	-	.	ID=gene-STY7866_RS05040;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=STY7866_RS05040
NZ_CAAR01000134.1	Protein Homology	CDS	1226	2761	.	-	0	ID=cds-WP_001562609.1;Parent=gene-STY7866_RS05040;Dbxref=Genbank:WP_001562609.1;Name=WP_001562609.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455644.1;locus_tag=STY7866_RS05040;product=glucans biosynthesis protein MdoG;protein_id=WP_001562609.1;transl_table=11
NZ_CAAR01000134.1	RefSeq	pseudogene	3033	4186	.	+	.	ID=gene-STY7866_RS05045;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=pseudogene;locus_tag=STY7866_RS05045;pseudo=true
NZ_CAAR01000134.1	Protein Homology	CDS	3033	4186	.	+	0	ID=cds-STY7866_RS05045;Parent=gene-STY7866_RS05045;Note=frameshifted;gbkey=CDS;gene=mdoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455643.1;locus_tag=STY7866_RS05045;product=glucans biosynthesis protein MdoC;pseudo=true;transl_table=11
NZ_CAAR01000134.1	RefSeq	gene	4203	5690	.	-	.	ID=gene-STY7866_RS05050;Name=STY7866_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05050
NZ_CAAR01000134.1	Protein Homology	CDS	4203	5690	.	-	0	ID=cds-WP_000976323.1;Parent=gene-STY7866_RS05050;Dbxref=Genbank:WP_000976323.1;Name=WP_000976323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455642.1;locus_tag=STY7866_RS05050;product=phospholipase D family protein;protein_id=WP_000976323.1;transl_table=11
NZ_CAAR01000134.1	RefSeq	gene	5626	6165	.	-	.	ID=gene-STY7866_RS05055;Name=STY7866_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05055
NZ_CAAR01000134.1	Protein Homology	CDS	5626	6165	.	-	0	ID=cds-WP_000203944.1;Parent=gene-STY7866_RS05055;Dbxref=Genbank:WP_000203944.1;Name=WP_000203944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=STY7866_RS05055;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000203944.1;transl_table=11
NZ_CAAR01000134.1	RefSeq	gene	6253	6573	.	-	.	ID=gene-STY7866_RS05060;Name=STY7866_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05060
NZ_CAAR01000134.1	Protein Homology	CDS	6253	6573	.	-	0	ID=cds-WP_000111254.1;Parent=gene-STY7866_RS05060;Dbxref=Genbank:WP_000111254.1;Name=WP_000111254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455640.1;locus_tag=STY7866_RS05060;product=type 1 fimbrial protein;protein_id=WP_000111254.1;transl_table=11
##sequence-region NZ_CAAR01000133.1 1 12051
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000133.1	RefSeq	region	1	12051	.	+	.	ID=NZ_CAAR01000133.1:1..12051;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000133.1	RefSeq	pseudogene	1	544	.	-	.	ID=gene-STY7866_RS04965;Name=STY7866_RS04965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS04965;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000133.1	Protein Homology	CDS	1	544	.	-	0	ID=cds-STY7866_RS04965;Parent=gene-STY7866_RS04965;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456733.1;locus_tag=STY7866_RS04965;partial=true;product=tRNA dihydrouridine(16) synthase DusC;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000133.1	RefSeq	gene	653	1846	.	-	.	ID=gene-STY7866_RS04970;Name=STY7866_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04970
NZ_CAAR01000133.1	Protein Homology	CDS	653	1846	.	-	0	ID=cds-WP_000150113.1;Parent=gene-STY7866_RS04970;Dbxref=Genbank:WP_000150113.1;Name=WP_000150113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456734.1;locus_tag=STY7866_RS04970;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_000150113.1;transl_table=11
NZ_CAAR01000133.1	RefSeq	gene	1861	2505	.	-	.	ID=gene-STY7866_RS04975;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=STY7866_RS04975
NZ_CAAR01000133.1	Protein Homology	CDS	1861	2505	.	-	0	ID=cds-WP_000781183.1;Parent=gene-STY7866_RS04975;Dbxref=Genbank:WP_000781183.1;Name=WP_000781183.1;gbkey=CDS;gene=maiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=STY7866_RS04975;product=maleylacetoacetate isomerase;protein_id=WP_000781183.1;transl_table=11
NZ_CAAR01000133.1	RefSeq	gene	2514	3215	.	-	.	ID=gene-STY7866_RS04980;Name=STY7866_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04980
NZ_CAAR01000133.1	Protein Homology	CDS	2514	3215	.	-	0	ID=cds-WP_000170621.1;Parent=gene-STY7866_RS04980;Dbxref=Genbank:WP_000170621.1;Name=WP_000170621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456736.1;locus_tag=STY7866_RS04980;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000170621.1;transl_table=11
NZ_CAAR01000133.1	RefSeq	gene	3231	4268	.	-	.	ID=gene-STY7866_RS04985;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=STY7866_RS04985
NZ_CAAR01000133.1	Protein Homology	CDS	3231	4268	.	-	0	ID=cds-WP_001289857.1;Parent=gene-STY7866_RS04985;Dbxref=Genbank:WP_001289857.1;Name=WP_001289857.1;gbkey=CDS;gene=gtdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=STY7866_RS04985;product=gentisate 1%2C2-dioxygenase;protein_id=WP_001289857.1;transl_table=11
NZ_CAAR01000133.1	RefSeq	gene	4280	5638	.	-	.	ID=gene-STY7866_RS04990;Name=STY7866_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04990
NZ_CAAR01000133.1	Protein Homology	CDS	4280	5638	.	-	0	ID=cds-WP_000194222.1;Parent=gene-STY7866_RS04990;Dbxref=Genbank:WP_000194222.1;Name=WP_000194222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456738.1;locus_tag=STY7866_RS04990;product=aromatic acid/H+ symport family MFS transporter;protein_id=WP_000194222.1;transl_table=11
NZ_CAAR01000133.1	RefSeq	gene	5764	6672	.	+	.	ID=gene-STY7866_RS04995;Name=STY7866_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04995
NZ_CAAR01000133.1	Protein Homology	CDS	5764	6672	.	+	0	ID=cds-WP_000024658.1;Parent=gene-STY7866_RS04995;Dbxref=Genbank:WP_000024658.1;Name=WP_000024658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456739.1;locus_tag=STY7866_RS04995;product=LysR family transcriptional regulator;protein_id=WP_000024658.1;transl_table=11
NZ_CAAR01000133.1	RefSeq	gene	6804	7202	.	+	.	ID=gene-STY7866_RS05000;Name=STY7866_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05000
NZ_CAAR01000133.1	Protein Homology	CDS	6804	7202	.	+	0	ID=cds-WP_000045719.1;Parent=gene-STY7866_RS05000;Dbxref=Genbank:WP_000045719.1;Name=WP_000045719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456740.1;locus_tag=STY7866_RS05000;product=CidA/LrgA family protein;protein_id=WP_000045719.1;transl_table=11
NZ_CAAR01000133.1	RefSeq	gene	7199	7894	.	+	.	ID=gene-STY7866_RS05005;Name=STY7866_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05005
NZ_CAAR01000133.1	Protein Homology	CDS	7199	7894	.	+	0	ID=cds-WP_000989296.1;Parent=gene-STY7866_RS05005;Dbxref=Genbank:WP_000989296.1;Name=WP_000989296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456741.1;locus_tag=STY7866_RS05005;product=CidB/LrgB family autolysis modulator;protein_id=WP_000989296.1;transl_table=11
NZ_CAAR01000133.1	RefSeq	pseudogene	8048	8931	.	+	.	ID=gene-STY7866_RS05010;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=pseudogene;locus_tag=STY7866_RS05010;pseudo=true
NZ_CAAR01000133.1	Protein Homology	CDS	8048	8931	.	+	0	ID=cds-STY7866_RS05010;Parent=gene-STY7866_RS05010;Note=frameshifted;gbkey=CDS;gene=cdd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456742.1;locus_tag=STY7866_RS05010;product=cytidine deaminase;pseudo=true;transl_table=11
NZ_CAAR01000133.1	RefSeq	gene	9108	9827	.	+	.	ID=gene-STY7866_RS05015;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=STY7866_RS05015
NZ_CAAR01000133.1	Protein Homology	CDS	9108	9827	.	+	0	ID=cds-WP_000920079.1;Parent=gene-STY7866_RS05015;Dbxref=Genbank:WP_000920079.1;Name=WP_000920079.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456743.1;locus_tag=STY7866_RS05015;product=outer membrane permeability protein SanA;protein_id=WP_000920079.1;transl_table=11
NZ_CAAR01000133.1	RefSeq	gene	9824	10069	.	+	.	ID=gene-STY7866_RS05020;Name=STY7866_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05020
NZ_CAAR01000133.1	Protein Homology	CDS	9824	10069	.	+	0	ID=cds-WP_000605187.1;Parent=gene-STY7866_RS05020;Dbxref=Genbank:WP_000605187.1;Name=WP_000605187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456744.1;locus_tag=STY7866_RS05020;product=DUF2542 family protein;protein_id=WP_000605187.1;transl_table=11
NZ_CAAR01000133.1	RefSeq	gene	10274	11515	.	+	.	ID=gene-STY7866_RS05025;Name=STY7866_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS05025
NZ_CAAR01000133.1	Protein Homology	CDS	10274	11515	.	+	0	ID=cds-WP_001136400.1;Parent=gene-STY7866_RS05025;Dbxref=Genbank:WP_001136400.1;Name=WP_001136400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456745.1;locus_tag=STY7866_RS05025;product=NAD(P)-dependent oxidoreductase;protein_id=WP_001136400.1;transl_table=11
NZ_CAAR01000133.1	RefSeq	pseudogene	11509	12051	.	+	.	ID=gene-STY7866_RS05030;Name=STY7866_RS05030;end_range=12051,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS05030;partial=true;pseudo=true
NZ_CAAR01000133.1	Protein Homology	CDS	11509	12051	.	+	0	ID=cds-STY7866_RS05030;Parent=gene-STY7866_RS05030;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=12051,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=STY7866_RS05030;partial=true;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000132.1 1 5096
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000132.1	RefSeq	region	1	5096	.	+	.	ID=NZ_CAAR01000132.1:1..5096;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000132.1	RefSeq	gene	439	1224	.	-	.	ID=gene-STY7866_RS04940;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=STY7866_RS04940
NZ_CAAR01000132.1	Protein Homology	CDS	439	1224	.	-	0	ID=cds-WP_000612724.1;Parent=gene-STY7866_RS04940;Dbxref=Genbank:WP_000612724.1;Name=WP_000612724.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457066.1;locus_tag=STY7866_RS04940;product=enhanced serine sensitivity protein SseB;protein_id=WP_000612724.1;transl_table=11
NZ_CAAR01000132.1	RefSeq	gene	1325	2608	.	-	.	ID=gene-STY7866_RS04945;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=STY7866_RS04945
NZ_CAAR01000132.1	Protein Homology	CDS	1325	2608	.	-	0	ID=cds-WP_000133543.1;Parent=gene-STY7866_RS04945;Dbxref=Genbank:WP_000133543.1;Name=WP_000133543.1;gbkey=CDS;gene=pepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457067.1;locus_tag=STY7866_RS04945;product=aminopeptidase PepB;protein_id=WP_000133543.1;transl_table=11
NZ_CAAR01000132.1	RefSeq	gene	2662	2862	.	-	.	ID=gene-STY7866_RS04950;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=STY7866_RS04950
NZ_CAAR01000132.1	Protein Homology	CDS	2662	2862	.	-	0	ID=cds-WP_000523621.1;Parent=gene-STY7866_RS04950;Dbxref=Genbank:WP_000523621.1;Name=WP_000523621.1;gbkey=CDS;gene=iscX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=STY7866_RS04950;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523621.1;transl_table=11
NZ_CAAR01000132.1	RefSeq	gene	2874	3209	.	-	.	ID=gene-STY7866_RS04955;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=STY7866_RS04955
NZ_CAAR01000132.1	Protein Homology	CDS	2874	3209	.	-	0	ID=cds-WP_001124466.1;Parent=gene-STY7866_RS04955;Dbxref=Genbank:WP_001124466.1;Name=WP_001124466.1;gbkey=CDS;gene=fdx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=STY7866_RS04955;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124466.1;transl_table=11
NZ_CAAR01000132.1	RefSeq	gene	3211	5061	.	-	.	ID=gene-STY7866_RS04960;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=STY7866_RS04960
NZ_CAAR01000132.1	Protein Homology	CDS	3211	5061	.	-	0	ID=cds-WP_001196658.1;Parent=gene-STY7866_RS04960;Dbxref=Genbank:WP_001196658.1;Name=WP_001196658.1;gbkey=CDS;gene=hscA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=STY7866_RS04960;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196658.1;transl_table=11
##sequence-region NZ_CAAR01000131.1 1 12402
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000131.1	RefSeq	region	1	12402	.	+	.	ID=NZ_CAAR01000131.1:1..12402;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000131.1	RefSeq	pseudogene	258	736	.	-	.	ID=gene-STY7866_RS04895;Name=folK;gbkey=Gene;gene=folK;gene_biotype=pseudogene;locus_tag=STY7866_RS04895;pseudo=true
NZ_CAAR01000131.1	Protein Homology	CDS	258	736	.	-	0	ID=cds-STY7866_RS04895;Parent=gene-STY7866_RS04895;Note=frameshifted;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454799.1;locus_tag=STY7866_RS04895;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;pseudo=true;transl_table=11
NZ_CAAR01000131.1	RefSeq	gene	733	2151	.	-	.	ID=gene-STY7866_RS04900;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=STY7866_RS04900
NZ_CAAR01000131.1	Protein Homology	CDS	733	2151	.	-	0	ID=cds-WP_000174623.1;Parent=gene-STY7866_RS04900;Dbxref=Genbank:WP_000174623.1;Name=WP_000174623.1;gbkey=CDS;gene=pcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454800.1;locus_tag=STY7866_RS04900;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_000174623.1;transl_table=11
NZ_CAAR01000131.1	RefSeq	gene	2292	3188	.	-	.	ID=gene-STY7866_RS04905;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=STY7866_RS04905
NZ_CAAR01000131.1	Protein Homology	CDS	2292	3188	.	-	0	ID=cds-WP_001763945.1;Parent=gene-STY7866_RS04905;Dbxref=Genbank:WP_001763945.1;Name=WP_001763945.1;gbkey=CDS;gene=gluQRS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454801.1;locus_tag=STY7866_RS04905;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_001763945.1;transl_table=11
NZ_CAAR01000131.1	RefSeq	gene	3257	3712	.	-	.	ID=gene-STY7866_RS04910;Name=STY7866_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04910
NZ_CAAR01000131.1	Protein Homology	CDS	3257	3712	.	-	0	ID=cds-WP_001155232.1;Parent=gene-STY7866_RS04910;Dbxref=Genbank:WP_001155232.1;Name=WP_001155232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454802.1;locus_tag=STY7866_RS04910;product=RNA polymerase-binding protein DksA;protein_id=WP_001155232.1;transl_table=11
NZ_CAAR01000131.1	RefSeq	gene	3889	4593	.	-	.	ID=gene-STY7866_RS04915;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=STY7866_RS04915
NZ_CAAR01000131.1	Protein Homology	CDS	3889	4593	.	-	0	ID=cds-WP_000899414.1;Parent=gene-STY7866_RS04915;Dbxref=Genbank:WP_000899414.1;Name=WP_000899414.1;gbkey=CDS;gene=sfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454803.1;locus_tag=STY7866_RS04915;product=DNA/RNA nuclease SfsA;protein_id=WP_000899414.1;transl_table=11
NZ_CAAR01000131.1	RefSeq	gene	4610	5140	.	-	.	ID=gene-STY7866_RS04920;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=STY7866_RS04920
NZ_CAAR01000131.1	Protein Homology	CDS	4610	5140	.	-	0	ID=cds-WP_001294175.1;Parent=gene-STY7866_RS04920;Dbxref=Genbank:WP_001294175.1;Name=WP_001294175.1;gbkey=CDS;gene=thpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454804.1;locus_tag=STY7866_RS04920;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294175.1;transl_table=11
NZ_CAAR01000131.1	RefSeq	gene	5168	7642	.	+	.	ID=gene-STY7866_RS04925;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=STY7866_RS04925
NZ_CAAR01000131.1	Protein Homology	CDS	5168	7642	.	+	0	ID=cds-WP_000938536.1;Parent=gene-STY7866_RS04925;Dbxref=Genbank:WP_000938536.1;Name=WP_000938536.1;gbkey=CDS;gene=hrpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459194.1;locus_tag=STY7866_RS04925;product=ATP-dependent helicase HrpB;protein_id=WP_000938536.1;transl_table=11
NZ_CAAR01000131.1	RefSeq	gene	7783	10305	.	+	.	ID=gene-STY7866_RS04930;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=STY7866_RS04930
NZ_CAAR01000131.1	Protein Homology	CDS	7783	10305	.	+	0	ID=cds-WP_000918135.1;Parent=gene-STY7866_RS04930;Dbxref=Genbank:WP_000918135.1;Name=WP_000918135.1;gbkey=CDS;gene=mrcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454806.1;locus_tag=STY7866_RS04930;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918135.1;transl_table=11
NZ_CAAR01000131.1	RefSeq	pseudogene	10598	12402	.	+	.	ID=gene-STY7866_RS04935;Name=fhuA;end_range=12402,.;gbkey=Gene;gene=fhuA;gene_biotype=pseudogene;locus_tag=STY7866_RS04935;partial=true;pseudo=true
NZ_CAAR01000131.1	Protein Homology	CDS	10598	12402	.	+	0	ID=cds-STY7866_RS04935;Parent=gene-STY7866_RS04935;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=12402,.;gbkey=CDS;gene=fhuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=STY7866_RS04935;partial=true;product=ferrichrome porin FhuA;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000130.1 1 457
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000130.1	RefSeq	region	1	457	.	+	.	ID=NZ_CAAR01000130.1:1..457;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000130.1	RefSeq	gene	43	457	.	+	.	ID=gene-STY7866_RS04890;Name=recX;end_range=457,.;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=STY7866_RS04890;partial=true
NZ_CAAR01000130.1	Protein Homology	CDS	43	457	.	+	0	ID=cds-WP_024151026.1;Parent=gene-STY7866_RS04890;Dbxref=Genbank:WP_024151026.1;Name=WP_024151026.1;end_range=457,.;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457221.1;locus_tag=STY7866_RS04890;partial=true;product=recombination regulator RecX;protein_id=WP_024151026.1;transl_table=11
##sequence-region NZ_CAAR01000129.1 1 4857
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000129.1	RefSeq	region	1	4857	.	+	.	ID=NZ_CAAR01000129.1:1..4857;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000129.1	RefSeq	gene	1	1026	.	-	.	ID=gene-STY7866_RS04860;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=STY7866_RS04860;partial=true;start_range=.,1
NZ_CAAR01000129.1	Protein Homology	CDS	1	1026	.	-	0	ID=cds-WP_000063536.1;Parent=gene-STY7866_RS04860;Dbxref=Genbank:WP_000063536.1;Name=WP_000063536.1;gbkey=CDS;gene=rhaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458000.1;locus_tag=STY7866_RS04860;partial=true;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063536.1;start_range=.,1;transl_table=11
NZ_CAAR01000129.1	RefSeq	gene	1646	2329	.	+	.	ID=gene-STY7866_RS04870;Name=STY7866_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04870
NZ_CAAR01000129.1	Protein Homology	CDS	1646	2329	.	+	0	ID=cds-WP_000378721.1;Parent=gene-STY7866_RS04870;Dbxref=Genbank:WP_000378721.1;Name=WP_000378721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457999.1;locus_tag=STY7866_RS04870;product=hypothetical protein;protein_id=WP_000378721.1;transl_table=11
NZ_CAAR01000129.1	RefSeq	gene	2485	3792	.	-	.	ID=gene-STY7866_RS04875;Name=STY7866_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04875
NZ_CAAR01000129.1	Protein Homology	CDS	2485	3792	.	-	0	ID=cds-WP_000566798.1;Parent=gene-STY7866_RS04875;Dbxref=Genbank:WP_000566798.1;Name=WP_000566798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457998.1;locus_tag=STY7866_RS04875;product=TRAP transporter large permease;protein_id=WP_000566798.1;transl_table=11
NZ_CAAR01000129.1	RefSeq	gene	3785	4300	.	-	.	ID=gene-STY7866_RS04880;Name=STY7866_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04880
NZ_CAAR01000129.1	Protein Homology	CDS	3785	4300	.	-	0	ID=cds-WP_001091409.1;Parent=gene-STY7866_RS04880;Dbxref=Genbank:WP_001091409.1;Name=WP_001091409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457997.1;locus_tag=STY7866_RS04880;product=TRAP transporter small permease;protein_id=WP_001091409.1;transl_table=11
NZ_CAAR01000129.1	RefSeq	pseudogene	4319	4857	.	-	.	ID=gene-STY7866_RS04885;Name=STY7866_RS04885;end_range=4857,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS04885;partial=true;pseudo=true
NZ_CAAR01000129.1	Protein Homology	CDS	4319	4857	.	-	2	ID=cds-STY7866_RS04885;Parent=gene-STY7866_RS04885;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4857,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=STY7866_RS04885;partial=true;product=TRAP transporter substrate-binding protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000128.1 1 9195
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000128.1	RefSeq	region	1	9195	.	+	.	ID=NZ_CAAR01000128.1:1..9195;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000128.1	RefSeq	gene	235	1209	.	-	.	ID=gene-STY7866_RS04815;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=STY7866_RS04815
NZ_CAAR01000128.1	Protein Homology	CDS	235	1209	.	-	0	ID=cds-WP_000002559.1;Parent=gene-STY7866_RS04815;Dbxref=Genbank:WP_000002559.1;Name=WP_000002559.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457111.1;locus_tag=STY7866_RS04815;product=signal peptidase I;protein_id=WP_000002559.1;transl_table=11
NZ_CAAR01000128.1	RefSeq	gene	1226	3025	.	-	.	ID=gene-STY7866_RS04820;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=STY7866_RS04820
NZ_CAAR01000128.1	Protein Homology	CDS	1226	3025	.	-	0	ID=cds-WP_000790154.1;Parent=gene-STY7866_RS04820;Dbxref=Genbank:WP_000790154.1;Name=WP_000790154.1;gbkey=CDS;gene=lepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434076.1;locus_tag=STY7866_RS04820;product=elongation factor 4;protein_id=WP_000790154.1;transl_table=11
NZ_CAAR01000128.1	RefSeq	gene	3284	3763	.	-	.	ID=gene-STY7866_RS04825;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=STY7866_RS04825
NZ_CAAR01000128.1	Protein Homology	CDS	3284	3763	.	-	0	ID=cds-WP_000589049.1;Parent=gene-STY7866_RS04825;Dbxref=Genbank:WP_000589049.1;Name=WP_000589049.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457113.1;locus_tag=STY7866_RS04825;product=SoxR-reducing system protein RseC;protein_id=WP_000589049.1;transl_table=11
NZ_CAAR01000128.1	RefSeq	gene	3760	4716	.	-	.	ID=gene-STY7866_RS04830;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=STY7866_RS04830
NZ_CAAR01000128.1	Protein Homology	CDS	3760	4716	.	-	0	ID=cds-WP_000812023.1;Parent=gene-STY7866_RS04830;Dbxref=Genbank:WP_000812023.1;Name=WP_000812023.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457114.1;locus_tag=STY7866_RS04830;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812023.1;transl_table=11
NZ_CAAR01000128.1	RefSeq	gene	4716	5339	.	-	.	ID=gene-STY7866_RS04835;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=STY7866_RS04835
NZ_CAAR01000128.1	Protein Homology	CDS	4716	5339	.	-	0	ID=cds-WP_001763940.1;Parent=gene-STY7866_RS04835;Dbxref=Genbank:WP_001763940.1;Name=WP_001763940.1;gbkey=CDS;gene=rseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457115.1;locus_tag=STY7866_RS04835;product=anti-sigma-E factor RseA;protein_id=WP_001763940.1;transl_table=11
NZ_CAAR01000128.1	RefSeq	gene	5399	5974	.	-	.	ID=gene-STY7866_RS04840;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=STY7866_RS04840
NZ_CAAR01000128.1	Protein Homology	CDS	5399	5974	.	-	0	ID=cds-WP_000003307.1;Parent=gene-STY7866_RS04840;Dbxref=Genbank:WP_000003307.1;Name=WP_000003307.1;gbkey=CDS;gene=rpoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=STY7866_RS04840;product=RNA polymerase sigma factor RpoE;protein_id=WP_000003307.1;transl_table=11
NZ_CAAR01000128.1	RefSeq	gene	5971	6135	.	-	.	ID=gene-STY7866_RS26915;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=STY7866_RS26915
NZ_CAAR01000128.1	Protein Homology	CDS	5971	6135	.	-	0	ID=cds-WP_014344135.1;Parent=gene-STY7866_RS26915;Dbxref=Genbank:WP_014344135.1;Name=WP_014344135.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518806.1;locus_tag=STY7866_RS26915;product=rpoE leader peptide RseD;protein_id=WP_014344135.1;transl_table=11
NZ_CAAR01000128.1	RefSeq	gene	6135	6314	.	-	.	ID=gene-STY7866_RS26920;Name=STY7866_RS26920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26920
NZ_CAAR01000128.1	Protein Homology	CDS	6135	6314	.	-	0	ID=cds-WP_001521719.1;Parent=gene-STY7866_RS26920;Dbxref=Genbank:WP_001521719.1;Name=WP_001521719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521719.1;locus_tag=STY7866_RS26920;product=hypothetical protein;protein_id=WP_001521719.1;transl_table=11
NZ_CAAR01000128.1	RefSeq	gene	6399	8021	.	+	.	ID=gene-STY7866_RS04845;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=STY7866_RS04845
NZ_CAAR01000128.1	Protein Homology	CDS	6399	8021	.	+	0	ID=cds-WP_000989173.1;Parent=gene-STY7866_RS04845;Dbxref=Genbank:WP_000989173.1;Name=WP_000989173.1;gbkey=CDS;gene=nadB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457117.1;locus_tag=STY7866_RS04845;product=L-aspartate oxidase;protein_id=WP_000989173.1;transl_table=11
NZ_CAAR01000128.1	RefSeq	gene	8006	8743	.	-	.	ID=gene-STY7866_RS04850;Name=STY7866_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04850
NZ_CAAR01000128.1	Protein Homology	CDS	8006	8743	.	-	0	ID=cds-WP_000083348.1;Parent=gene-STY7866_RS04850;Dbxref=Genbank:WP_000083348.1;Name=WP_000083348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457118.1;locus_tag=STY7866_RS04850;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_000083348.1;transl_table=11
NZ_CAAR01000128.1	RefSeq	pseudogene	8873	9195	.	+	.	ID=gene-STY7866_RS04855;Name=STY7866_RS04855;end_range=9195,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS04855;partial=true;pseudo=true
NZ_CAAR01000128.1	Protein Homology	CDS	8873	9195	.	+	0	ID=cds-STY7866_RS04855;Parent=gene-STY7866_RS04855;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=9195,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457119.1;locus_tag=STY7866_RS04855;partial=true;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000127.1 1 12709
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000127.1	RefSeq	region	1	12709	.	+	.	ID=NZ_CAAR01000127.1:1..12709;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000127.1	RefSeq	pseudogene	43	107	.	-	.	ID=gene-STY7866_RS26910;Name=STY7866_RS26910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26910;partial=true;pseudo=true;start_range=.,43
NZ_CAAR01000127.1	Protein Homology	CDS	43	107	.	-	0	ID=cds-STY7866_RS26910;Parent=gene-STY7866_RS26910;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004218179.1;locus_tag=STY7866_RS26910;partial=true;product=50S ribosomal protein L25;pseudo=true;start_range=.,43;transl_table=11
NZ_CAAR01000127.1	RefSeq	gene	164	1924	.	-	.	ID=gene-STY7866_RS04760;Name=STY7866_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04760
NZ_CAAR01000127.1	Protein Homology	CDS	164	1924	.	-	0	ID=cds-WP_000578118.1;Parent=gene-STY7866_RS04760;Dbxref=Genbank:WP_000578118.1;Name=WP_000578118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456781.1;locus_tag=STY7866_RS04760;product=DEAD/DEAH box helicase;protein_id=WP_000578118.1;transl_table=11
NZ_CAAR01000127.1	RefSeq	gene	2076	2771	.	+	.	ID=gene-STY7866_RS04765;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=STY7866_RS04765
NZ_CAAR01000127.1	Protein Homology	CDS	2076	2771	.	+	0	ID=cds-WP_001234836.1;Parent=gene-STY7866_RS04765;Dbxref=Genbank:WP_001234836.1;Name=WP_001234836.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456780.1;locus_tag=STY7866_RS04765;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234836.1;transl_table=11
NZ_CAAR01000127.1	RefSeq	pseudogene	2799	3990	.	+	.	ID=gene-STY7866_RS04770;Name=STY7866_RS04770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS04770;pseudo=true
NZ_CAAR01000127.1	Protein Homology	CDS	2799	3990	.	+	0	ID=cds-STY7866_RS04770;Parent=gene-STY7866_RS04770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456779.1;locus_tag=STY7866_RS04770;product=Bcr/CflA family multidrug efflux MFS transporter;pseudo=true;transl_table=11
NZ_CAAR01000127.1	RefSeq	gene	4381	4725	.	+	.	ID=gene-STY7866_RS04780;Name=STY7866_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04780
NZ_CAAR01000127.1	Protein Homology	CDS	4381	4725	.	+	0	ID=cds-WP_001094639.1;Parent=gene-STY7866_RS04780;Dbxref=Genbank:WP_001094639.1;Name=WP_001094639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456777.1;locus_tag=STY7866_RS04780;product=hypothetical protein;protein_id=WP_001094639.1;transl_table=11
NZ_CAAR01000127.1	RefSeq	gene	4729	6318	.	-	.	ID=gene-STY7866_RS04785;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=STY7866_RS04785
NZ_CAAR01000127.1	Protein Homology	CDS	4729	6318	.	-	0	ID=cds-WP_000203612.1;Parent=gene-STY7866_RS04785;Dbxref=Genbank:WP_000203612.1;Name=WP_000203612.1;gbkey=CDS;gene=yejF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456776.1;locus_tag=STY7866_RS04785;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_000203612.1;transl_table=11
NZ_CAAR01000127.1	RefSeq	gene	6320	7345	.	-	.	ID=gene-STY7866_RS04790;Name=STY7866_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04790
NZ_CAAR01000127.1	Protein Homology	CDS	6320	7345	.	-	0	ID=cds-WP_001137761.1;Parent=gene-STY7866_RS04790;Dbxref=Genbank:WP_001137761.1;Name=WP_001137761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456775.1;locus_tag=STY7866_RS04790;product=ABC transporter permease;protein_id=WP_001137761.1;transl_table=11
NZ_CAAR01000127.1	RefSeq	gene	7345	8439	.	-	.	ID=gene-STY7866_RS04795;Name=STY7866_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04795
NZ_CAAR01000127.1	Protein Homology	CDS	7345	8439	.	-	0	ID=cds-WP_000501623.1;Parent=gene-STY7866_RS04795;Dbxref=Genbank:WP_000501623.1;Name=WP_000501623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456774.1;locus_tag=STY7866_RS04795;product=microcin C ABC transporter permease YejB;protein_id=WP_000501623.1;transl_table=11
NZ_CAAR01000127.1	RefSeq	pseudogene	8449	10255	.	-	.	ID=gene-STY7866_RS04800;Name=STY7866_RS04800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS04800;pseudo=true
NZ_CAAR01000127.1	Protein Homology	CDS	8449	10255	.	-	0	ID=cds-STY7866_RS04800;Parent=gene-STY7866_RS04800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456773.1;locus_tag=STY7866_RS04800;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
NZ_CAAR01000127.1	RefSeq	gene	10362	11918	.	-	.	ID=gene-STY7866_RS04805;Name=STY7866_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04805
NZ_CAAR01000127.1	Protein Homology	CDS	10362	11918	.	-	0	ID=cds-WP_000957756.1;Parent=gene-STY7866_RS04805;Dbxref=Genbank:WP_000957756.1;Name=WP_000957756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456772.1;locus_tag=STY7866_RS04805;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000957756.1;transl_table=11
NZ_CAAR01000127.1	RefSeq	gene	12244	12709	.	-	.	ID=gene-STY7866_RS04810;Name=mepS;end_range=12709,.;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=STY7866_RS04810;partial=true
NZ_CAAR01000127.1	Protein Homology	CDS	12244	12709	.	-	1	ID=cds-WP_000555492.1;Parent=gene-STY7866_RS04810;Dbxref=Genbank:WP_000555492.1;Name=WP_000555492.1;end_range=12709,.;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456771.1;locus_tag=STY7866_RS04810;partial=true;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000555492.1;transl_table=11
##sequence-region NZ_CAAR01000126.1 1 39419
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000126.1	RefSeq	region	1	39419	.	+	.	ID=NZ_CAAR01000126.1:1..39419;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000126.1	RefSeq	pseudogene	1	382	.	-	.	ID=gene-STY7866_RS04560;Name=STY7866_RS04560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS04560;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000126.1	Protein Homology	CDS	1	382	.	-	0	ID=cds-STY7866_RS04560;Parent=gene-STY7866_RS04560;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=STY7866_RS04560;partial=true;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	473	2911	.	-	.	ID=gene-STY7866_RS04565;Name=STY7866_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04565
NZ_CAAR01000126.1	Protein Homology	CDS	473	2911	.	-	0	ID=cds-WP_000076357.1;Parent=gene-STY7866_RS04565;Dbxref=Genbank:WP_000076357.1;Name=WP_000076357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458804.1;locus_tag=STY7866_RS04565;product=ribonuclease R;protein_id=WP_000076357.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	2949	3374	.	-	.	ID=gene-STY7866_RS04570;Name=STY7866_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04570
NZ_CAAR01000126.1	Protein Homology	CDS	2949	3374	.	-	0	ID=cds-WP_001177630.1;Parent=gene-STY7866_RS04570;Dbxref=Genbank:WP_001177630.1;Name=WP_001177630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=STY7866_RS04570;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177630.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	3594	4892	.	-	.	ID=gene-STY7866_RS04575;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=STY7866_RS04575
NZ_CAAR01000126.1	Protein Homology	CDS	3594	4892	.	-	0	ID=cds-WP_000527972.1;Parent=gene-STY7866_RS04575;Dbxref=Genbank:WP_000527972.1;Name=WP_000527972.1;gbkey=CDS;gene=purA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=STY7866_RS04575;product=adenylosuccinate synthase;protein_id=WP_000527972.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	4995	5192	.	-	.	ID=gene-STY7866_RS04580;Name=STY7866_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04580
NZ_CAAR01000126.1	Protein Homology	CDS	4995	5192	.	-	0	ID=cds-WP_001089290.1;Parent=gene-STY7866_RS04580;Dbxref=Genbank:WP_001089290.1;Name=WP_001089290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458801.1;locus_tag=STY7866_RS04580;product=DUF2065 family protein;protein_id=WP_001089290.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	5271	6275	.	-	.	ID=gene-STY7866_RS04585;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=STY7866_RS04585
NZ_CAAR01000126.1	Protein Homology	CDS	5271	6275	.	-	0	ID=cds-WP_001232417.1;Parent=gene-STY7866_RS04585;Dbxref=Genbank:WP_001232417.1;Name=WP_001232417.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458800.1;locus_tag=STY7866_RS04585;product=protease modulator HflC;protein_id=WP_001232417.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	pseudogene	6278	7538	.	-	.	ID=gene-STY7866_RS04590;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=pseudogene;locus_tag=STY7866_RS04590;pseudo=true
NZ_CAAR01000126.1	Protein Homology	CDS	6278	7538	.	-	0	ID=cds-STY7866_RS04590;Parent=gene-STY7866_RS04590;Note=frameshifted;gbkey=CDS;gene=hflK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458799.1;locus_tag=STY7866_RS04590;product=FtsH protease activity modulator HflK;pseudo=true;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	7753	9033	.	-	.	ID=gene-STY7866_RS04595;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=STY7866_RS04595
NZ_CAAR01000126.1	Protein Homology	CDS	7753	9033	.	-	0	ID=cds-WP_000460344.1;Parent=gene-STY7866_RS04595;Dbxref=Genbank:WP_000460344.1;Name=WP_000460344.1;gbkey=CDS;gene=hflX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458798.1;locus_tag=STY7866_RS04595;product=GTPase HflX;protein_id=WP_000460344.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	9104	9412	.	-	.	ID=gene-STY7866_RS04600;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=STY7866_RS04600
NZ_CAAR01000126.1	Protein Homology	CDS	9104	9412	.	-	0	ID=cds-WP_001051875.1;Parent=gene-STY7866_RS04600;Dbxref=Genbank:WP_001051875.1;Name=WP_001051875.1;gbkey=CDS;gene=hfq;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458797.1;locus_tag=STY7866_RS04600;product=RNA chaperone Hfq;protein_id=WP_001051875.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	9495	10445	.	-	.	ID=gene-STY7866_RS04605;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=STY7866_RS04605
NZ_CAAR01000126.1	Protein Homology	CDS	9495	10445	.	-	0	ID=cds-WP_001000739.1;Parent=gene-STY7866_RS04605;Dbxref=Genbank:WP_001000739.1;Name=WP_001000739.1;gbkey=CDS;gene=miaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458796.1;locus_tag=STY7866_RS04605;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001000739.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	pseudogene	10438	12293	.	-	.	ID=gene-STY7866_RS04610;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=pseudogene;locus_tag=STY7866_RS04610;pseudo=true
NZ_CAAR01000126.1	Protein Homology	CDS	10438	12293	.	-	0	ID=cds-STY7866_RS04610;Parent=gene-STY7866_RS04610;Note=frameshifted;gbkey=CDS;gene=mutL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458795.1;locus_tag=STY7866_RS04610;product=DNA mismatch repair endonuclease MutL;pseudo=true;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	12303	13622	.	-	.	ID=gene-STY7866_RS04615;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=STY7866_RS04615
NZ_CAAR01000126.1	Protein Homology	CDS	12303	13622	.	-	0	ID=cds-WP_000640365.1;Parent=gene-STY7866_RS04615;Dbxref=Genbank:WP_000640365.1;Name=WP_000640365.1;gbkey=CDS;gene=amiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458794.1;locus_tag=STY7866_RS04615;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000640365.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	13639	14100	.	-	.	ID=gene-STY7866_RS04620;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=STY7866_RS04620
NZ_CAAR01000126.1	Protein Homology	CDS	13639	14100	.	-	0	ID=cds-WP_000981984.1;Parent=gene-STY7866_RS04620;Dbxref=Genbank:WP_000981984.1;Name=WP_000981984.1;gbkey=CDS;gene=tsaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458793.1;locus_tag=STY7866_RS04620;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981984.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	14072	15619	.	-	.	ID=gene-STY7866_RS04625;Name=STY7866_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04625
NZ_CAAR01000126.1	Protein Homology	CDS	14072	15619	.	-	0	ID=cds-WP_000968671.1;Parent=gene-STY7866_RS04625;Dbxref=Genbank:WP_000968671.1;Name=WP_000968671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458792.1;locus_tag=STY7866_RS04625;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_000968671.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	15603	16757	.	+	.	ID=gene-STY7866_RS04630;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=STY7866_RS04630
NZ_CAAR01000126.1	Protein Homology	CDS	15603	16757	.	+	0	ID=cds-WP_000964746.1;Parent=gene-STY7866_RS04630;Dbxref=Genbank:WP_000964746.1;Name=WP_000964746.1;gbkey=CDS;gene=queG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458791.1;locus_tag=STY7866_RS04630;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_000964746.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	17025	17100	.	-	.	ID=gene-STY7866_RS04635;Name=STY7866_RS04635;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS04635
NZ_CAAR01000126.1	tRNAscan-SE	tRNA	17025	17100	.	-	.	ID=rna-STY7866_RS04635;Parent=gene-STY7866_RS04635;anticodon=(pos:complement(17065..17067));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS04635;product=tRNA-Gly
NZ_CAAR01000126.1	tRNAscan-SE	exon	17025	17100	.	-	.	ID=exon-STY7866_RS04635-1;Parent=rna-STY7866_RS04635;anticodon=(pos:complement(17065..17067));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS04635;product=tRNA-Gly
NZ_CAAR01000126.1	RefSeq	gene	17257	17332	.	-	.	ID=gene-STY7866_RS04640;Name=STY7866_RS04640;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS04640
NZ_CAAR01000126.1	tRNAscan-SE	tRNA	17257	17332	.	-	.	ID=rna-STY7866_RS04640;Parent=gene-STY7866_RS04640;anticodon=(pos:complement(17297..17299));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS04640;product=tRNA-Gly
NZ_CAAR01000126.1	tRNAscan-SE	exon	17257	17332	.	-	.	ID=exon-STY7866_RS04640-1;Parent=rna-STY7866_RS04640;anticodon=(pos:complement(17297..17299));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS04640;product=tRNA-Gly
NZ_CAAR01000126.1	RefSeq	gene	17628	18347	.	+	.	ID=gene-STY7866_RS04645;Name=STY7866_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04645
NZ_CAAR01000126.1	Protein Homology	CDS	17628	18347	.	+	0	ID=cds-WP_000922806.1;Parent=gene-STY7866_RS04645;Dbxref=Genbank:WP_000922806.1;Name=WP_000922806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458790.1;locus_tag=STY7866_RS04645;product=transporter substrate-binding domain-containing protein;protein_id=WP_000922806.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	18409	18954	.	-	.	ID=gene-STY7866_RS04650;Name=STY7866_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04650
NZ_CAAR01000126.1	Protein Homology	CDS	18409	18954	.	-	0	ID=cds-WP_001271546.1;Parent=gene-STY7866_RS04650;Dbxref=Genbank:WP_001271546.1;Name=WP_001271546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458789.1;locus_tag=STY7866_RS04650;product=oligoribonuclease;protein_id=WP_001271546.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	19037	20113	.	+	.	ID=gene-STY7866_RS04655;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=STY7866_RS04655
NZ_CAAR01000126.1	Protein Homology	CDS	19037	20113	.	+	0	ID=cds-WP_021013216.1;Parent=gene-STY7866_RS04655;Dbxref=Genbank:WP_021013216.1;Name=WP_021013216.1;gbkey=CDS;gene=rsgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458788.3;locus_tag=STY7866_RS04655;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_021013216.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	20205	21173	.	+	.	ID=gene-STY7866_RS04660;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=STY7866_RS04660
NZ_CAAR01000126.1	Protein Homology	CDS	20205	21173	.	+	0	ID=cds-WP_000934949.1;Parent=gene-STY7866_RS04660;Dbxref=Genbank:WP_000934949.1;Name=WP_000934949.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;gbkey=CDS;gene=psd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=STY7866_RS04660;product=phosphatidylserine decarboxylase;protein_id=WP_000934949.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	21192	24518	.	+	.	ID=gene-STY7866_RS04665;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=STY7866_RS04665
NZ_CAAR01000126.1	Protein Homology	CDS	21192	24518	.	+	0	ID=cds-WP_001236755.1;Parent=gene-STY7866_RS04665;Dbxref=Genbank:WP_001236755.1;Name=WP_001236755.1;gbkey=CDS;gene=mscM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=STY7866_RS04665;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236755.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	24655	25032	.	-	.	ID=gene-STY7866_RS04670;Name=STY7866_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04670
NZ_CAAR01000126.1	Protein Homology	CDS	24655	25032	.	-	0	ID=cds-WP_001112927.1;Parent=gene-STY7866_RS04670;Dbxref=Genbank:WP_001112927.1;Name=WP_001112927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001113008.1;locus_tag=STY7866_RS04670;product=hypothetical protein;protein_id=WP_001112927.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	25040	26542	.	-	.	ID=gene-STY7866_RS04675;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=STY7866_RS04675
NZ_CAAR01000126.1	Protein Homology	CDS	25040	26542	.	-	0	ID=cds-WP_000149876.1;Parent=gene-STY7866_RS04675;Dbxref=Genbank:WP_000149876.1;Name=WP_000149876.1;gbkey=CDS;gene=yjeM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458784.1;locus_tag=STY7866_RS04675;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_000149876.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	26768	27745	.	-	.	ID=gene-STY7866_RS04680;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=STY7866_RS04680
NZ_CAAR01000126.1	Protein Homology	CDS	26768	27745	.	-	0	ID=cds-WP_000004789.1;Parent=gene-STY7866_RS04680;Dbxref=Genbank:WP_000004789.1;Name=WP_000004789.1;gbkey=CDS;gene=epmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=STY7866_RS04680;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004789.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	28068	29858	.	+	.	ID=gene-STY7866_RS04685;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=STY7866_RS04685
NZ_CAAR01000126.1	Protein Homology	CDS	28068	29858	.	+	0	ID=cds-WP_001192954.1;Parent=gene-STY7866_RS04685;Dbxref=Genbank:WP_001192954.1;Name=WP_001192954.1;gbkey=CDS;gene=frdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458782.1;locus_tag=STY7866_RS04685;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192954.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	29870	30586	.	+	.	ID=gene-STY7866_RS04690;Name=STY7866_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04690
NZ_CAAR01000126.1	Protein Homology	CDS	29870	30586	.	+	0	ID=cds-WP_031626188.1;Parent=gene-STY7866_RS04690;Dbxref=Genbank:WP_031626188.1;Name=WP_031626188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458781.1;locus_tag=STY7866_RS04690;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_031626188.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	30597	30992	.	+	.	ID=gene-STY7866_RS04695;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=STY7866_RS04695
NZ_CAAR01000126.1	Protein Homology	CDS	30597	30992	.	+	0	ID=cds-WP_000208749.1;Parent=gene-STY7866_RS04695;Dbxref=Genbank:WP_000208749.1;Name=WP_000208749.1;gbkey=CDS;gene=frdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458780.1;locus_tag=STY7866_RS04695;product=fumarate reductase subunit FrdC;protein_id=WP_000208749.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	31003	31362	.	+	.	ID=gene-STY7866_RS04700;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=STY7866_RS04700
NZ_CAAR01000126.1	Protein Homology	CDS	31003	31362	.	+	0	ID=cds-WP_000609650.1;Parent=gene-STY7866_RS04700;Dbxref=Genbank:WP_000609650.1;Name=WP_000609650.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458779.1;locus_tag=STY7866_RS04700;product=fumarate reductase subunit FrdD;protein_id=WP_000609650.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	31474	32007	.	+	.	ID=gene-STY7866_RS04705;Name=STY7866_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04705
NZ_CAAR01000126.1	Protein Homology	CDS	31474	32007	.	+	0	ID=cds-WP_001238395.1;Parent=gene-STY7866_RS04705;Dbxref=Genbank:WP_001238395.1;Name=WP_001238395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458778.1;locus_tag=STY7866_RS04705;product=lipocalin family protein;protein_id=WP_001238395.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	32024	32341	.	-	.	ID=gene-STY7866_RS04710;Name=STY7866_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04710
NZ_CAAR01000126.1	Protein Homology	CDS	32024	32341	.	-	0	ID=cds-WP_000118469.1;Parent=gene-STY7866_RS04710;Dbxref=Genbank:WP_000118469.1;Name=WP_000118469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458777.1;locus_tag=STY7866_RS04710;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118469.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	32597	33184	.	+	.	ID=gene-STY7866_RS04715;Name=STY7866_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04715
NZ_CAAR01000126.1	Protein Homology	CDS	32597	33184	.	+	0	ID=cds-WP_001763937.1;Parent=gene-STY7866_RS04715;Dbxref=Genbank:WP_001763937.1;Name=WP_001763937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458776.1;locus_tag=STY7866_RS04715;product=helix-turn-helix transcriptional regulator;protein_id=WP_001763937.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	33215	33361	.	-	.	ID=gene-STY7866_RS04720;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=STY7866_RS04720
NZ_CAAR01000126.1	Protein Homology	CDS	33215	33361	.	-	0	ID=cds-WP_000239598.1;Parent=gene-STY7866_RS04720;Dbxref=Genbank:WP_000239598.1;Name=WP_000239598.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458775.1;locus_tag=STY7866_RS04720;product=lipoprotein toxin entericidin B;protein_id=WP_000239598.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	33469	33603	.	-	.	ID=gene-STY7866_RS04725;Name=STY7866_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04725
NZ_CAAR01000126.1	Protein Homology	CDS	33469	33603	.	-	0	ID=cds-WP_000977686.1;Parent=gene-STY7866_RS04725;Dbxref=Genbank:WP_000977686.1;Name=WP_000977686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458774.1;locus_tag=STY7866_RS04725;product=entericidin A/B family lipoprotein;protein_id=WP_000977686.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	33664	34230	.	-	.	ID=gene-STY7866_RS04730;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=STY7866_RS04730
NZ_CAAR01000126.1	Protein Homology	CDS	33664	34230	.	-	0	ID=cds-WP_000257282.1;Parent=gene-STY7866_RS04730;Dbxref=Genbank:WP_000257282.1;Name=WP_000257282.1;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=STY7866_RS04730;product=elongation factor P;protein_id=WP_000257282.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	34271	35299	.	+	.	ID=gene-STY7866_RS04735;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=STY7866_RS04735
NZ_CAAR01000126.1	Protein Homology	CDS	34271	35299	.	+	0	ID=cds-WP_000940491.1;Parent=gene-STY7866_RS04735;Dbxref=Genbank:WP_000940491.1;Name=WP_000940491.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458772.1;locus_tag=STY7866_RS04735;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940491.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	35582	36439	.	+	.	ID=gene-STY7866_RS04740;Name=STY7866_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04740
NZ_CAAR01000126.1	Protein Homology	CDS	35582	36439	.	+	0	ID=cds-WP_001229237.1;Parent=gene-STY7866_RS04740;Dbxref=Genbank:WP_001229237.1;Name=WP_001229237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458771.1;locus_tag=STY7866_RS04740;product=hypothetical protein;protein_id=WP_001229237.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	36487	36840	.	-	.	ID=gene-STY7866_RS04745;Name=STY7866_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04745
NZ_CAAR01000126.1	Protein Homology	CDS	36487	36840	.	-	0	ID=cds-WP_000558210.1;Parent=gene-STY7866_RS04745;Dbxref=Genbank:WP_000558210.1;Name=WP_000558210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463195.2;locus_tag=STY7866_RS04745;product=DUF4156 domain-containing protein;protein_id=WP_000558210.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	37084	38730	.	-	.	ID=gene-STY7866_RS04750;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=STY7866_RS04750
NZ_CAAR01000126.1	Protein Homology	CDS	37084	38730	.	-	0	ID=cds-WP_000729126.1;Parent=gene-STY7866_RS04750;Dbxref=Genbank:WP_000729126.1;Name=WP_000729126.1;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=STY7866_RS04750;product=chaperonin GroEL;protein_id=WP_000729126.1;transl_table=11
NZ_CAAR01000126.1	RefSeq	gene	38774	39067	.	-	.	ID=gene-STY7866_RS04755;Name=STY7866_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04755
NZ_CAAR01000126.1	Protein Homology	CDS	38774	39067	.	-	0	ID=cds-WP_000027827.1;Parent=gene-STY7866_RS04755;Dbxref=Genbank:WP_000027827.1;Name=WP_000027827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=STY7866_RS04755;product=co-chaperone GroES;protein_id=WP_000027827.1;transl_table=11
##sequence-region NZ_CAAR01000125.1 1 1704
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000125.1	RefSeq	region	1	1704	.	+	.	ID=NZ_CAAR01000125.1:1..1704;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000125.1	RefSeq	pseudogene	1	718	.	+	.	ID=gene-STY7866_RS04550;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=pseudogene;locus_tag=STY7866_RS04550;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000125.1	Protein Homology	CDS	1	718	.	+	1	ID=cds-STY7866_RS04550;Parent=gene-STY7866_RS04550;Note=SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=mukB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455480.1;locus_tag=STY7866_RS04550;partial=true;product=chromosome partition protein MukB;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000125.1	RefSeq	pseudogene	1063	1704	.	+	.	ID=gene-STY7866_RS04555;Name=STY7866_RS04555;end_range=1704,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS04555;partial=true;pseudo=true
NZ_CAAR01000125.1	Protein Homology	CDS	1063	1704	.	+	0	ID=cds-STY7866_RS04555;Parent=gene-STY7866_RS04555;Note=catalyzes the formation of a meso-diaminopimelyl- meso-diaminopimelyl crosslink%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1704,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455481.1;locus_tag=STY7866_RS04555;partial=true;product=L%2CD-transpeptidase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000124.1 1 5126
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000124.1	RefSeq	region	1	5126	.	+	.	ID=NZ_CAAR01000124.1:1..5126;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000124.1	RefSeq	pseudogene	1	314	.	-	.	ID=gene-STY7866_RS04515;Name=STY7866_RS04515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS04515;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000124.1	Protein Homology	CDS	1	314	.	-	0	ID=cds-STY7866_RS04515;Parent=gene-STY7866_RS04515;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454757.1;locus_tag=STY7866_RS04515;partial=true;product=type II secretion system protein GspE;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000124.1	RefSeq	gene	324	761	.	-	.	ID=gene-STY7866_RS04520;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=STY7866_RS04520
NZ_CAAR01000124.1	Protein Homology	CDS	324	761	.	-	0	ID=cds-WP_000414989.1;Parent=gene-STY7866_RS04520;Dbxref=Genbank:WP_000414989.1;Name=WP_000414989.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454758.1;locus_tag=STY7866_RS04520;product=prepilin peptidase-dependent pilin;protein_id=WP_000414989.1;transl_table=11
NZ_CAAR01000124.1	RefSeq	gene	983	1876	.	-	.	ID=gene-STY7866_RS04525;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=STY7866_RS04525
NZ_CAAR01000124.1	Protein Homology	CDS	983	1876	.	-	0	ID=cds-WP_001135134.1;Parent=gene-STY7866_RS04525;Dbxref=Genbank:WP_001135134.1;Name=WP_001135134.1;gbkey=CDS;gene=nadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454759.1;locus_tag=STY7866_RS04525;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135134.1;transl_table=11
NZ_CAAR01000124.1	RefSeq	gene	1964	2527	.	+	.	ID=gene-STY7866_RS04530;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=STY7866_RS04530
NZ_CAAR01000124.1	Protein Homology	CDS	1964	2527	.	+	0	ID=cds-WP_000936326.1;Parent=gene-STY7866_RS04530;Dbxref=Genbank:WP_000936326.1;Name=WP_000936326.1;gbkey=CDS;gene=ampD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454760.1;locus_tag=STY7866_RS04530;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000936326.1;transl_table=11
NZ_CAAR01000124.1	RefSeq	gene	2524	3378	.	+	.	ID=gene-STY7866_RS04535;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=STY7866_RS04535
NZ_CAAR01000124.1	Protein Homology	CDS	2524	3378	.	+	0	ID=cds-WP_000172040.1;Parent=gene-STY7866_RS04535;Dbxref=Genbank:WP_000172040.1;Name=WP_000172040.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454761.1;locus_tag=STY7866_RS04535;product=beta-lactamase regulator AmpE;protein_id=WP_000172040.1;transl_table=11
NZ_CAAR01000124.1	RefSeq	gene	3470	4420	.	-	.	ID=gene-STY7866_RS04540;Name=STY7866_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04540
NZ_CAAR01000124.1	Protein Homology	CDS	3470	4420	.	-	0	ID=cds-WP_000024772.1;Parent=gene-STY7866_RS04540;Dbxref=Genbank:WP_000024772.1;Name=WP_000024772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454762.1;locus_tag=STY7866_RS04540;product=family 43 glycosylhydrolase;protein_id=WP_000024772.1;transl_table=11
NZ_CAAR01000124.1	RefSeq	gene	4420	5126	.	-	.	ID=gene-STY7866_RS04545;Name=STY7866_RS04545;end_range=5126,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04545;partial=true
NZ_CAAR01000124.1	Protein Homology	CDS	4420	5126	.	-	2	ID=cds-WP_000674546.1;Parent=gene-STY7866_RS04545;Dbxref=Genbank:WP_000674546.1;Name=WP_000674546.1;end_range=5126,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454763.1;locus_tag=STY7866_RS04545;partial=true;product=hypothetical protein;protein_id=WP_000674546.1;transl_table=11
##sequence-region NZ_CAAR01000123.1 1 3167
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000123.1	RefSeq	region	1	3167	.	+	.	ID=NZ_CAAR01000123.1:1..3167;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000123.1	RefSeq	pseudogene	104	1190	.	+	.	ID=gene-STY7866_RS04490;Name=STY7866_RS04490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS04490;pseudo=true
NZ_CAAR01000123.1	Protein Homology	CDS	104	1190	.	+	0	ID=cds-STY7866_RS04490;Parent=gene-STY7866_RS04490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458634.1;locus_tag=STY7866_RS04490;product=pilus assembly protein PilR;pseudo=true;transl_table=11
NZ_CAAR01000123.1	RefSeq	gene	1190	1825	.	+	.	ID=gene-STY7866_RS04495;Name=STY7866_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04495
NZ_CAAR01000123.1	Protein Homology	CDS	1190	1825	.	+	0	ID=cds-WP_010989286.1;Parent=gene-STY7866_RS04495;Dbxref=Genbank:WP_010989286.1;Name=WP_010989286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458635.1;locus_tag=STY7866_RS04495;product=pilus assembly protein PilX;protein_id=WP_010989286.1;transl_table=11
NZ_CAAR01000123.1	RefSeq	pseudogene	1835	2311	.	+	.	ID=gene-STY7866_RS04500;Name=STY7866_RS04500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS04500;pseudo=true
NZ_CAAR01000123.1	Protein Homology	CDS	1835	2311	.	+	0	ID=cds-STY7866_RS04500;Parent=gene-STY7866_RS04500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458636.1;locus_tag=STY7866_RS04500;product=lytic transglycosylase domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000123.1	RefSeq	gene	2308	2970	.	+	.	ID=gene-STY7866_RS04505;Name=STY7866_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04505
NZ_CAAR01000123.1	Protein Homology	CDS	2308	2970	.	+	0	ID=cds-WP_000218700.1;Parent=gene-STY7866_RS04505;Dbxref=Genbank:WP_000218700.1;Name=WP_000218700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458637.1;locus_tag=STY7866_RS04505;product=prepilin peptidase;protein_id=WP_000218700.1;transl_table=11
NZ_CAAR01000123.1	RefSeq	gene	2967	3167	.	+	.	ID=gene-STY7866_RS26390;Name=pilV;end_range=3167,.;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=STY7866_RS26390;partial=true
NZ_CAAR01000123.1	Protein Homology	CDS	2967	3167	.	+	0	ID=cds-WP_000744273.1;Parent=gene-STY7866_RS26390;Dbxref=Genbank:WP_000744273.1;Name=WP_000744273.1;end_range=3167,.;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458638.1;locus_tag=STY7866_RS26390;partial=true;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=WP_000744273.1;transl_table=11
##sequence-region NZ_CAAR01000122.1 1 1744
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000122.1	RefSeq	region	1	1744	.	+	.	ID=NZ_CAAR01000122.1:1..1744;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000122.1	RefSeq	gene	190	1744	.	+	.	ID=gene-STY7866_RS04480;Name=STY7866_RS04480;end_range=1744,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04480;partial=true
NZ_CAAR01000122.1	Protein Homology	CDS	190	1744	.	+	0	ID=cds-WP_031626183.1;Parent=gene-STY7866_RS04480;Dbxref=Genbank:WP_031626183.1;Name=WP_031626183.1;end_range=1744,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454664.1;locus_tag=STY7866_RS04480;partial=true;product=sensor histidine kinase;protein_id=WP_031626183.1;transl_table=11
##sequence-region NZ_CAAR01000121.1 1 3227
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000121.1	RefSeq	region	1	3227	.	+	.	ID=NZ_CAAR01000121.1:1..3227;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000121.1	RefSeq	gene	1	1247	.	-	.	ID=gene-STY7866_RS04460;Name=STY7866_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04460;partial=true;start_range=.,1
NZ_CAAR01000121.1	Protein Homology	CDS	1	1247	.	-	0	ID=cds-WP_001763927.1;Parent=gene-STY7866_RS04460;Dbxref=Genbank:WP_001763927.1;Name=WP_001763927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457727.1;locus_tag=STY7866_RS04460;partial=true;product=oxalacetate decarboxylase subunit beta;protein_id=WP_001763927.1;start_range=.,1;transl_table=11
NZ_CAAR01000121.1	RefSeq	pseudogene	1260	3036	.	-	.	ID=gene-STY7866_RS04465;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=pseudogene;locus_tag=STY7866_RS04465;pseudo=true
NZ_CAAR01000121.1	Protein Homology	CDS	1260	3036	.	-	0	ID=cds-STY7866_RS04465;Parent=gene-STY7866_RS04465;Note=frameshifted;gbkey=CDS;gene=oadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454666.1;locus_tag=STY7866_RS04465;product=oxaloacetate decarboxylase subunit alpha;pseudo=true;transl_table=11
NZ_CAAR01000121.1	RefSeq	gene	3052	3227	.	-	.	ID=gene-STY7866_RS04470;Name=STY7866_RS04470;end_range=3227,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04470;partial=true
NZ_CAAR01000121.1	Protein Homology	CDS	3052	3227	.	-	2	ID=cds-WP_000441257.1;Parent=gene-STY7866_RS04470;Dbxref=Genbank:WP_000441257.1;Name=WP_000441257.1;end_range=3227,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454667.1;locus_tag=STY7866_RS04470;partial=true;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_000441257.1;transl_table=11
##sequence-region NZ_CAAR01000120.1 1 8700
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000120.1	RefSeq	region	1	8700	.	+	.	ID=NZ_CAAR01000120.1:1..8700;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000120.1	RefSeq	pseudogene	1	66	.	-	.	ID=gene-STY7866_RS26905;Name=STY7866_RS26905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26905;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000120.1	Protein Homology	CDS	1	66	.	-	0	ID=cds-STY7866_RS26905;Parent=gene-STY7866_RS26905;Note=catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457729.1;locus_tag=STY7866_RS26905;partial=true;product=oxaloacetate decarboxylase subunit gamma;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000120.1	RefSeq	gene	222	839	.	-	.	ID=gene-STY7866_RS04400;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=STY7866_RS04400
NZ_CAAR01000120.1	Protein Homology	CDS	222	839	.	-	0	ID=cds-WP_000162405.1;Parent=gene-STY7866_RS04400;Dbxref=Genbank:WP_000162405.1;Name=WP_000162405.1;gbkey=CDS;gene=ttdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457730.1;locus_tag=STY7866_RS04400;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000162405.1;transl_table=11
NZ_CAAR01000120.1	RefSeq	gene	839	1738	.	-	.	ID=gene-STY7866_RS04405;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=STY7866_RS04405
NZ_CAAR01000120.1	Protein Homology	CDS	839	1738	.	-	0	ID=cds-WP_000045349.1;Parent=gene-STY7866_RS04405;Dbxref=Genbank:WP_000045349.1;Name=WP_000045349.1;gbkey=CDS;gene=ttdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457731.1;locus_tag=STY7866_RS04405;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000045349.1;transl_table=11
NZ_CAAR01000120.1	RefSeq	gene	1771	3039	.	-	.	ID=gene-STY7866_RS04410;Name=STY7866_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04410
NZ_CAAR01000120.1	Protein Homology	CDS	1771	3039	.	-	0	ID=cds-WP_000433390.1;Parent=gene-STY7866_RS04410;Dbxref=Genbank:WP_000433390.1;Name=WP_000433390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=STY7866_RS04410;product=SLC13/DASS family transporter;protein_id=WP_000433390.1;transl_table=11
NZ_CAAR01000120.1	RefSeq	gene	3250	3915	.	-	.	ID=gene-STY7866_RS04415;Name=STY7866_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04415
NZ_CAAR01000120.1	Protein Homology	CDS	3250	3915	.	-	0	ID=cds-WP_001189520.1;Parent=gene-STY7866_RS04415;Dbxref=Genbank:WP_001189520.1;Name=WP_001189520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=STY7866_RS04415;product=GntR family transcriptional regulator;protein_id=WP_001189520.1;transl_table=11
NZ_CAAR01000120.1	RefSeq	gene	3902	4531	.	-	.	ID=gene-STY7866_RS04420;Name=STY7866_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04420
NZ_CAAR01000120.1	Protein Homology	CDS	3902	4531	.	-	0	ID=cds-WP_000723776.1;Parent=gene-STY7866_RS04420;Dbxref=Genbank:WP_000723776.1;Name=WP_000723776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=STY7866_RS04420;product=GntR family transcriptional regulator;protein_id=WP_000723776.1;transl_table=11
NZ_CAAR01000120.1	RefSeq	gene	4651	5589	.	-	.	ID=gene-STY7866_RS04425;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=STY7866_RS04425
NZ_CAAR01000120.1	Protein Homology	CDS	4651	5589	.	-	0	ID=cds-WP_000861588.1;Parent=gene-STY7866_RS04425;Dbxref=Genbank:WP_000861588.1;Name=WP_000861588.1;gbkey=CDS;gene=mdh;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457735.1;locus_tag=STY7866_RS04425;product=malate dehydrogenase;protein_id=WP_000861588.1;transl_table=11
NZ_CAAR01000120.1	RefSeq	gene	6003	6473	.	+	.	ID=gene-STY7866_RS04430;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=STY7866_RS04430
NZ_CAAR01000120.1	Protein Homology	CDS	6003	6473	.	+	0	ID=cds-WP_001257852.1;Parent=gene-STY7866_RS04430;Dbxref=Genbank:WP_001257852.1;Name=WP_001257852.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=STY7866_RS04430;product=transcriptional regulator ArgR;protein_id=WP_001257852.1;transl_table=11
NZ_CAAR01000120.1	RefSeq	gene	6837	7100	.	+	.	ID=gene-STY7866_RS04440;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=STY7866_RS04440
NZ_CAAR01000120.1	Protein Homology	CDS	6837	7100	.	+	0	ID=cds-WP_000695693.1;Parent=gene-STY7866_RS04440;Dbxref=Genbank:WP_000695693.1;Name=WP_000695693.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=STY7866_RS04440;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695693.1;transl_table=11
NZ_CAAR01000120.1	RefSeq	gene	7204	7470	.	+	.	ID=gene-STY7866_RS04445;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=STY7866_RS04445
NZ_CAAR01000120.1	Protein Homology	CDS	7204	7470	.	+	0	ID=cds-WP_000853277.1;Parent=gene-STY7866_RS04445;Dbxref=Genbank:WP_000853277.1;Name=WP_000853277.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457738.1;locus_tag=STY7866_RS04445;product=peroxide/acid stress response protein YhcN;protein_id=WP_000853277.1;transl_table=11
NZ_CAAR01000120.1	RefSeq	gene	7530	7802	.	-	.	ID=gene-STY7866_RS04450;Name=STY7866_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04450
NZ_CAAR01000120.1	Protein Homology	CDS	7530	7802	.	-	0	ID=cds-WP_001103887.1;Parent=gene-STY7866_RS04450;Dbxref=Genbank:WP_001103887.1;Name=WP_001103887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457739.1;locus_tag=STY7866_RS04450;product=hypothetical protein;protein_id=WP_001103887.1;transl_table=11
NZ_CAAR01000120.1	RefSeq	pseudogene	7974	8700	.	-	.	ID=gene-STY7866_RS04455;Name=STY7866_RS04455;end_range=8700,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS04455;partial=true;pseudo=true
NZ_CAAR01000120.1	Protein Homology	CDS	7974	8700	.	-	1	ID=cds-STY7866_RS04455;Parent=gene-STY7866_RS04455;Note=with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=8700,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457740.1;locus_tag=STY7866_RS04455;partial=true;product=p-hydroxybenzoic acid efflux pump subunit AaeB;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000119.1 1 6117
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000119.1	RefSeq	region	1	6117	.	+	.	ID=NZ_CAAR01000119.1:1..6117;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000119.1	RefSeq	pseudogene	1	63	.	-	.	ID=gene-STY7866_RS26900;Name=STY7866_RS26900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26900;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000119.1	Protein Homology	CDS	1	63	.	-	0	ID=cds-STY7866_RS26900;Parent=gene-STY7866_RS26900;Note=catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454667.1;locus_tag=STY7866_RS26900;partial=true;product=oxaloacetate decarboxylase subunit gamma;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000119.1	RefSeq	gene	222	1562	.	-	.	ID=gene-STY7866_RS04370;Name=citN;gbkey=Gene;gene=citN;gene_biotype=protein_coding;locus_tag=STY7866_RS04370
NZ_CAAR01000119.1	Protein Homology	CDS	222	1562	.	-	0	ID=cds-WP_000183602.1;Parent=gene-STY7866_RS04370;Dbxref=Genbank:WP_000183602.1;Name=WP_000183602.1;gbkey=CDS;gene=citN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454668.1;locus_tag=STY7866_RS04370;product=citrate/sodium symporter CitN;protein_id=WP_000183602.1;transl_table=11
NZ_CAAR01000119.1	RefSeq	pseudogene	1807	2851	.	+	.	ID=gene-STY7866_RS04375;Name=citC;gbkey=Gene;gene=citC;gene_biotype=pseudogene;locus_tag=STY7866_RS04375;pseudo=true
NZ_CAAR01000119.1	Protein Homology	CDS	1807	2851	.	+	0	ID=cds-STY7866_RS04375;Parent=gene-STY7866_RS04375;Note=frameshifted;gbkey=CDS;gene=citC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454669.1;locus_tag=STY7866_RS04375;product=[citrate (pro-3S)-lyase] ligase;pseudo=true;transl_table=11
NZ_CAAR01000119.1	RefSeq	gene	2881	3174	.	+	.	ID=gene-STY7866_RS04380;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=STY7866_RS04380
NZ_CAAR01000119.1	Protein Homology	CDS	2881	3174	.	+	0	ID=cds-WP_000691461.1;Parent=gene-STY7866_RS04380;Dbxref=Genbank:WP_000691461.1;Name=WP_000691461.1;gbkey=CDS;gene=citD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454670.1;locus_tag=STY7866_RS04380;product=citrate lyase acyl carrier protein;protein_id=WP_000691461.1;transl_table=11
NZ_CAAR01000119.1	RefSeq	gene	3171	4040	.	+	.	ID=gene-STY7866_RS04385;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=STY7866_RS04385
NZ_CAAR01000119.1	Protein Homology	CDS	3171	4040	.	+	0	ID=cds-WP_001247810.1;Parent=gene-STY7866_RS04385;Dbxref=Genbank:WP_001247810.1;Name=WP_001247810.1;gbkey=CDS;gene=citE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454671.1;locus_tag=STY7866_RS04385;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_001247810.1;transl_table=11
NZ_CAAR01000119.1	RefSeq	pseudogene	4051	5572	.	+	.	ID=gene-STY7866_RS04390;Name=citF;gbkey=Gene;gene=citF;gene_biotype=pseudogene;locus_tag=STY7866_RS04390;pseudo=true
NZ_CAAR01000119.1	Protein Homology	CDS	4051	5572	.	+	0	ID=cds-STY7866_RS04390;Parent=gene-STY7866_RS04390;Note=frameshifted;gbkey=CDS;gene=citF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454672.1;locus_tag=STY7866_RS04390;product=citrate lyase subunit alpha;pseudo=true;transl_table=11
NZ_CAAR01000119.1	RefSeq	gene	5572	6117	.	+	.	ID=gene-STY7866_RS04395;Name=citX;end_range=6117,.;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=STY7866_RS04395;partial=true
NZ_CAAR01000119.1	Protein Homology	CDS	5572	6117	.	+	0	ID=cds-WP_000679049.1;Parent=gene-STY7866_RS04395;Dbxref=Genbank:WP_000679049.1;Name=WP_000679049.1;end_range=6117,.;gbkey=CDS;gene=citX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454673.1;locus_tag=STY7866_RS04395;partial=true;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_000679049.1;transl_table=11
##sequence-region NZ_CAAR01000118.1 1 6894
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000118.1	RefSeq	region	1	6894	.	+	.	ID=NZ_CAAR01000118.1:1..6894;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000118.1	RefSeq	pseudogene	1	201	.	-	.	ID=gene-STY7866_RS04330;Name=STY7866_RS04330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS04330;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000118.1	Protein Homology	CDS	1	201	.	-	0	ID=cds-STY7866_RS04330;Parent=gene-STY7866_RS04330;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=STY7866_RS04330;partial=true;product=stringent starvation protein A;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000118.1	RefSeq	gene	516	908	.	-	.	ID=gene-STY7866_RS04335;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=STY7866_RS04335
NZ_CAAR01000118.1	Protein Homology	CDS	516	908	.	-	0	ID=cds-WP_000829815.1;Parent=gene-STY7866_RS04335;Dbxref=Genbank:WP_000829815.1;Name=WP_000829815.1;gbkey=CDS;gene=rpsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=STY7866_RS04335;product=30S ribosomal protein S9;protein_id=WP_000829815.1;transl_table=11
NZ_CAAR01000118.1	RefSeq	gene	924	1352	.	-	.	ID=gene-STY7866_RS04340;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=STY7866_RS04340
NZ_CAAR01000118.1	Protein Homology	CDS	924	1352	.	-	0	ID=cds-WP_000847559.1;Parent=gene-STY7866_RS04340;Dbxref=Genbank:WP_000847559.1;Name=WP_000847559.1;gbkey=CDS;gene=rplM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312131.1;locus_tag=STY7866_RS04340;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11
NZ_CAAR01000118.1	RefSeq	pseudogene	1653	2776	.	-	.	ID=gene-STY7866_RS04345;Name=STY7866_RS04345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS04345;pseudo=true
NZ_CAAR01000118.1	Protein Homology	CDS	1653	2776	.	-	0	ID=cds-STY7866_RS04345;Parent=gene-STY7866_RS04345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457723.1;locus_tag=STY7866_RS04345;product=AFG1 family ATPase;pseudo=true;transl_table=11
NZ_CAAR01000118.1	RefSeq	gene	2969	3367	.	+	.	ID=gene-STY7866_RS04350;Name=STY7866_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04350
NZ_CAAR01000118.1	Protein Homology	CDS	2969	3367	.	+	0	ID=cds-WP_001763923.1;Parent=gene-STY7866_RS04350;Dbxref=Genbank:WP_001763923.1;Name=WP_001763923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=STY7866_RS04350;product=DUF1043 family protein;protein_id=WP_001763923.1;transl_table=11
NZ_CAAR01000118.1	RefSeq	gene	3524	4891	.	+	.	ID=gene-STY7866_RS04355;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=STY7866_RS04355
NZ_CAAR01000118.1	Protein Homology	CDS	3524	4891	.	+	0	ID=cds-WP_000716695.1;Parent=gene-STY7866_RS04355;Dbxref=Genbank:WP_000716695.1;Name=WP_000716695.1;gbkey=CDS;gene=degQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457725.1;locus_tag=STY7866_RS04355;product=serine endoprotease DegQ;protein_id=WP_000716695.1;transl_table=11
NZ_CAAR01000118.1	RefSeq	gene	4984	6054	.	+	.	ID=gene-STY7866_RS04360;Name=STY7866_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04360
NZ_CAAR01000118.1	Protein Homology	CDS	4984	6054	.	+	0	ID=cds-WP_000497705.1;Parent=gene-STY7866_RS04360;Dbxref=Genbank:WP_000497705.1;Name=WP_000497705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457726.1;locus_tag=STY7866_RS04360;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497705.1;transl_table=11
NZ_CAAR01000118.1	RefSeq	gene	6088	6786	.	-	.	ID=gene-STY7866_RS04365;Name=STY7866_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04365
NZ_CAAR01000118.1	Protein Homology	CDS	6088	6786	.	-	0	ID=cds-WP_024103889.1;Parent=gene-STY7866_RS04365;Dbxref=Genbank:WP_024103889.1;Name=WP_024103889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991998.1;locus_tag=STY7866_RS04365;product=hypothetical protein;protein_id=WP_024103889.1;transl_table=11
##sequence-region NZ_CAAR01000117.1 1 7452
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000117.1	RefSeq	region	1	7452	.	+	.	ID=NZ_CAAR01000117.1:1..7452;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000117.1	RefSeq	pseudogene	1	261	.	+	.	ID=gene-STY7866_RS04290;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=pseudogene;locus_tag=STY7866_RS04290;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000117.1	Protein Homology	CDS	1	261	.	+	0	ID=cds-STY7866_RS04290;Parent=gene-STY7866_RS04290;Note=porin involved in the transport of maltose and maltodextrins%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=lamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458529.1;locus_tag=STY7866_RS04290;partial=true;product=maltoporin LamB;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000117.1	RefSeq	gene	425	1342	.	+	.	ID=gene-STY7866_RS04295;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=STY7866_RS04295
NZ_CAAR01000117.1	Protein Homology	CDS	425	1342	.	+	0	ID=cds-WP_000782497.1;Parent=gene-STY7866_RS04295;Dbxref=Genbank:WP_000782497.1;Name=WP_000782497.1;gbkey=CDS;gene=malM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458530.1;locus_tag=STY7866_RS04295;product=maltose operon protein MalM;protein_id=WP_000782497.1;transl_table=11
NZ_CAAR01000117.1	RefSeq	gene	1524	2021	.	+	.	ID=gene-STY7866_RS04300;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=STY7866_RS04300
NZ_CAAR01000117.1	Protein Homology	CDS	1524	2021	.	+	0	ID=cds-WP_000019220.1;Parent=gene-STY7866_RS04300;Dbxref=Genbank:WP_000019220.1;Name=WP_000019220.1;gbkey=CDS;gene=ubiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458531.1;locus_tag=STY7866_RS04300;product=chorismate lyase;protein_id=WP_000019220.1;transl_table=11
NZ_CAAR01000117.1	RefSeq	gene	2035	2907	.	+	.	ID=gene-STY7866_RS04305;Name=STY7866_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04305
NZ_CAAR01000117.1	Protein Homology	CDS	2035	2907	.	+	0	ID=cds-WP_000455249.1;Parent=gene-STY7866_RS04305;Dbxref=Genbank:WP_000455249.1;Name=WP_000455249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458532.1;locus_tag=STY7866_RS04305;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455249.1;transl_table=11
NZ_CAAR01000117.1	RefSeq	gene	3006	5426	.	-	.	ID=gene-STY7866_RS04310;Name=STY7866_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04310
NZ_CAAR01000117.1	Protein Homology	CDS	3006	5426	.	-	0	ID=cds-WP_000017366.1;Parent=gene-STY7866_RS04310;Dbxref=Genbank:WP_000017366.1;Name=WP_000017366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458533.1;locus_tag=STY7866_RS04310;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017366.1;transl_table=11
NZ_CAAR01000117.1	RefSeq	gene	5597	5965	.	+	.	ID=gene-STY7866_RS04315;Name=STY7866_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04315
NZ_CAAR01000117.1	Protein Homology	CDS	5597	5965	.	+	0	ID=cds-WP_000002902.1;Parent=gene-STY7866_RS04315;Dbxref=Genbank:WP_000002902.1;Name=WP_000002902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458534.1;locus_tag=STY7866_RS04315;product=diacylglycerol kinase;protein_id=WP_000002902.1;transl_table=11
NZ_CAAR01000117.1	RefSeq	gene	6074	6682	.	+	.	ID=gene-STY7866_RS04320;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=STY7866_RS04320
NZ_CAAR01000117.1	Protein Homology	CDS	6074	6682	.	+	0	ID=cds-WP_000646079.1;Parent=gene-STY7866_RS04320;Dbxref=Genbank:WP_000646079.1;Name=WP_000646079.1;gbkey=CDS;gene=lexA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=STY7866_RS04320;product=repressor LexA;protein_id=WP_000646079.1;transl_table=11
NZ_CAAR01000117.1	RefSeq	gene	6861	7452	.	+	.	ID=gene-STY7866_RS04325;Name=STY7866_RS04325;end_range=7452,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04325;partial=true
NZ_CAAR01000117.1	Protein Homology	CDS	6861	7452	.	+	0	ID=cds-WP_001128109.1;Parent=gene-STY7866_RS04325;Dbxref=Genbank:WP_001128109.1;Name=WP_001128109.1;end_range=7452,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458536.1;locus_tag=STY7866_RS04325;partial=true;product=MATE family efflux transporter;protein_id=WP_001128109.1;transl_table=11
##sequence-region NZ_CAAR01000116.1 1 10248
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000116.1	RefSeq	region	1	10248	.	+	.	ID=NZ_CAAR01000116.1:1..10248;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000116.1	RefSeq	gene	8	742	.	+	.	ID=gene-STY7866_RS04240;Name=STY7866_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04240
NZ_CAAR01000116.1	Protein Homology	CDS	8	742	.	+	0	ID=cds-WP_000683258.1;Parent=gene-STY7866_RS04240;Dbxref=Genbank:WP_000683258.1;Name=WP_000683258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458935.1;locus_tag=STY7866_RS04240;product=aspartate/glutamate racemase family protein;protein_id=WP_000683258.1;transl_table=11
NZ_CAAR01000116.1	RefSeq	gene	748	1656	.	-	.	ID=gene-STY7866_RS04245;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=STY7866_RS04245
NZ_CAAR01000116.1	Protein Homology	CDS	748	1656	.	-	0	ID=cds-WP_000383509.1;Parent=gene-STY7866_RS04245;Dbxref=Genbank:WP_000383509.1;Name=WP_000383509.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458936.1;locus_tag=STY7866_RS04245;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000383509.1;transl_table=11
NZ_CAAR01000116.1	RefSeq	gene	1775	2947	.	-	.	ID=gene-STY7866_RS04250;Name=STY7866_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04250
NZ_CAAR01000116.1	Protein Homology	CDS	1775	2947	.	-	0	ID=cds-WP_001113051.1;Parent=gene-STY7866_RS04250;Dbxref=Genbank:WP_001113051.1;Name=WP_001113051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458937.1;locus_tag=STY7866_RS04250;product=beta-aspartyl-peptidase;protein_id=WP_001113051.1;transl_table=11
NZ_CAAR01000116.1	RefSeq	gene	2960	3421	.	-	.	ID=gene-STY7866_RS04255;Name=STY7866_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04255
NZ_CAAR01000116.1	Protein Homology	CDS	2960	3421	.	-	0	ID=cds-WP_000211979.1;Parent=gene-STY7866_RS04255;Dbxref=Genbank:WP_000211979.1;Name=WP_000211979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458938.1;locus_tag=STY7866_RS04255;product=membrane protein;protein_id=WP_000211979.1;transl_table=11
NZ_CAAR01000116.1	RefSeq	gene	3418	4089	.	-	.	ID=gene-STY7866_RS04260;Name=STY7866_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04260
NZ_CAAR01000116.1	Protein Homology	CDS	3418	4089	.	-	0	ID=cds-WP_000068750.1;Parent=gene-STY7866_RS04260;Dbxref=Genbank:WP_000068750.1;Name=WP_000068750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458939.1;locus_tag=STY7866_RS04260;product=YjiH family protein;protein_id=WP_000068750.1;transl_table=11
NZ_CAAR01000116.1	RefSeq	gene	4887	6071	.	-	.	ID=gene-STY7866_RS04270;Name=STY7866_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04270
NZ_CAAR01000116.1	Protein Homology	CDS	4887	6071	.	-	0	ID=cds-WP_000233270.1;Parent=gene-STY7866_RS04270;Dbxref=Genbank:WP_000233270.1;Name=WP_000233270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458941.1;locus_tag=STY7866_RS04270;product=MFS transporter;protein_id=WP_000233270.1;transl_table=11
NZ_CAAR01000116.1	RefSeq	gene	6291	7562	.	-	.	ID=gene-STY7866_RS04275;Name=STY7866_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04275
NZ_CAAR01000116.1	Protein Homology	CDS	6291	7562	.	-	0	ID=cds-WP_001033044.1;Parent=gene-STY7866_RS04275;Dbxref=Genbank:WP_001033044.1;Name=WP_001033044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458942.1;locus_tag=STY7866_RS04275;product=DUF445 domain-containing protein;protein_id=WP_001033044.1;transl_table=11
NZ_CAAR01000116.1	RefSeq	gene	7649	8890	.	-	.	ID=gene-STY7866_RS04280;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=STY7866_RS04280
NZ_CAAR01000116.1	Protein Homology	CDS	7649	8890	.	-	0	ID=cds-WP_001188918.1;Parent=gene-STY7866_RS04280;Dbxref=Genbank:WP_001188918.1;Name=WP_001188918.1;gbkey=CDS;gene=mdtM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458943.1;locus_tag=STY7866_RS04280;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001188918.1;transl_table=11
NZ_CAAR01000116.1	RefSeq	gene	9369	10248	.	+	.	ID=gene-STY7866_RS04285;Name=STY7866_RS04285;end_range=10248,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04285;partial=true
NZ_CAAR01000116.1	Protein Homology	CDS	9369	10248	.	+	0	ID=cds-WP_000749984.1;Parent=gene-STY7866_RS04285;Dbxref=Genbank:WP_000749984.1;Name=WP_000749984.1;end_range=10248,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000749997.1;locus_tag=STY7866_RS04285;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000749984.1;transl_table=11
##sequence-region NZ_CAAR01000115.1 1 8939
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000115.1	RefSeq	region	1	8939	.	+	.	ID=NZ_CAAR01000115.1:1..8939;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000115.1	RefSeq	gene	1	279	.	-	.	ID=gene-STY7866_RS04190;Name=STY7866_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04190;partial=true;start_range=.,1
NZ_CAAR01000115.1	Protein Homology	CDS	1	279	.	-	0	ID=cds-WP_000976132.1;Parent=gene-STY7866_RS04190;Dbxref=Genbank:WP_000976132.1;Name=WP_000976132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455884.1;locus_tag=STY7866_RS04190;partial=true;product=PTS sugar transporter subunit IIB;protein_id=WP_000976132.1;start_range=.,1;transl_table=11
NZ_CAAR01000115.1	RefSeq	gene	276	1394	.	-	.	ID=gene-STY7866_RS04195;Name=STY7866_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04195
NZ_CAAR01000115.1	Protein Homology	CDS	276	1394	.	-	0	ID=cds-WP_000144622.1;Parent=gene-STY7866_RS04195;Dbxref=Genbank:WP_000144622.1;Name=WP_000144622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455885.1;locus_tag=STY7866_RS04195;product=M42 family metallopeptidase;protein_id=WP_000144622.1;transl_table=11
NZ_CAAR01000115.1	RefSeq	gene	1611	2150	.	+	.	ID=gene-STY7866_RS04200;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=STY7866_RS04200
NZ_CAAR01000115.1	Protein Homology	CDS	1611	2150	.	+	0	ID=cds-WP_000229308.1;Parent=gene-STY7866_RS04200;Dbxref=Genbank:WP_000229308.1;Name=WP_000229308.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455886.1;locus_tag=STY7866_RS04200;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000229308.1;transl_table=11
NZ_CAAR01000115.1	RefSeq	gene	2147	3127	.	-	.	ID=gene-STY7866_RS04205;Name=STY7866_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04205
NZ_CAAR01000115.1	Protein Homology	CDS	2147	3127	.	-	0	ID=cds-WP_000599089.1;Parent=gene-STY7866_RS04205;Dbxref=Genbank:WP_000599089.1;Name=WP_000599089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455887.1;locus_tag=STY7866_RS04205;product=hypothetical protein;protein_id=WP_000599089.1;transl_table=11
NZ_CAAR01000115.1	RefSeq	gene	3234	4247	.	+	.	ID=gene-STY7866_RS04210;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=STY7866_RS04210
NZ_CAAR01000115.1	Protein Homology	CDS	3234	4247	.	+	0	ID=cds-WP_000336113.1;Parent=gene-STY7866_RS04210;Dbxref=Genbank:WP_000336113.1;Name=WP_000336113.1;gbkey=CDS;gene=tehA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455888.1;locus_tag=STY7866_RS04210;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_000336113.1;transl_table=11
NZ_CAAR01000115.1	RefSeq	gene	4234	4830	.	+	.	ID=gene-STY7866_RS04215;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=STY7866_RS04215
NZ_CAAR01000115.1	Protein Homology	CDS	4234	4830	.	+	0	ID=cds-WP_000218282.1;Parent=gene-STY7866_RS04215;Dbxref=Genbank:WP_000218282.1;Name=WP_000218282.1;gbkey=CDS;gene=tehB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455889.1;locus_tag=STY7866_RS04215;product=tellurite resistance methyltransferase TehB;protein_id=WP_000218282.1;transl_table=11
NZ_CAAR01000115.1	RefSeq	gene	4986	5654	.	+	.	ID=gene-STY7866_RS04220;Name=STY7866_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04220
NZ_CAAR01000115.1	Protein Homology	CDS	4986	5654	.	+	0	ID=cds-WP_001259016.1;Parent=gene-STY7866_RS04220;Dbxref=Genbank:WP_001259016.1;Name=WP_001259016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455890.1;locus_tag=STY7866_RS04220;product=DUF3313 domain-containing protein;protein_id=WP_001259016.1;transl_table=11
NZ_CAAR01000115.1	RefSeq	gene	5708	6886	.	-	.	ID=gene-STY7866_RS04225;Name=STY7866_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04225
NZ_CAAR01000115.1	Protein Homology	CDS	5708	6886	.	-	0	ID=cds-WP_001238507.1;Parent=gene-STY7866_RS04225;Dbxref=Genbank:WP_001238507.1;Name=WP_001238507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=STY7866_RS04225;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_001238507.1;transl_table=11
NZ_CAAR01000115.1	RefSeq	gene	6978	7514	.	+	.	ID=gene-STY7866_RS04230;Name=STY7866_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04230
NZ_CAAR01000115.1	Protein Homology	CDS	6978	7514	.	+	0	ID=cds-WP_000369547.1;Parent=gene-STY7866_RS04230;Dbxref=Genbank:WP_000369547.1;Name=WP_000369547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455892.1;locus_tag=STY7866_RS04230;product=helix-turn-helix domain-containing protein;protein_id=WP_000369547.1;transl_table=11
NZ_CAAR01000115.1	RefSeq	gene	7593	8939	.	+	.	ID=gene-STY7866_RS04235;Name=STY7866_RS04235;end_range=8939,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04235;partial=true
NZ_CAAR01000115.1	Protein Homology	CDS	7593	8939	.	+	0	ID=cds-WP_001763916.1;Parent=gene-STY7866_RS04235;Dbxref=Genbank:WP_001763916.1;Name=WP_001763916.1;end_range=8939,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001249737.1;locus_tag=STY7866_RS04235;partial=true;product=U32 family peptidase;protein_id=WP_001763916.1;transl_table=11
##sequence-region NZ_CAAR01000114.1 1 22287
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000114.1	RefSeq	region	1	22287	.	+	.	ID=NZ_CAAR01000114.1:1..22287;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000114.1	RefSeq	pseudogene	1	273	.	+	.	ID=gene-STY7866_RS04065;Name=STY7866_RS04065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS04065;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000114.1	Protein Homology	CDS	1	273	.	+	0	ID=cds-STY7866_RS04065;Parent=gene-STY7866_RS04065;Note=activates Salmonella pathogenicity island 4 genes and weakly represses Salmonella pathogenicity island 1 genes%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457260.1;locus_tag=STY7866_RS04065;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	369	578	.	-	.	ID=gene-STY7866_RS04070;Name=STY7866_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04070
NZ_CAAR01000114.1	Protein Homology	CDS	369	578	.	-	0	ID=cds-WP_010989223.1;Parent=gene-STY7866_RS04070;Dbxref=Genbank:WP_010989223.1;Name=WP_010989223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233160.1;locus_tag=STY7866_RS04070;product=hypothetical protein;protein_id=WP_010989223.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	550	1398	.	-	.	ID=gene-STY7866_RS04075;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=STY7866_RS04075
NZ_CAAR01000114.1	Protein Homology	CDS	550	1398	.	-	0	ID=cds-WP_000477918.1;Parent=gene-STY7866_RS04075;Dbxref=Genbank:WP_000477918.1;Name=WP_000477918.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457258.1;locus_tag=STY7866_RS04075;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_000477918.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	1389	2249	.	-	.	ID=gene-STY7866_RS04080;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=STY7866_RS04080
NZ_CAAR01000114.1	Protein Homology	CDS	1389	2249	.	-	0	ID=cds-WP_001104338.1;Parent=gene-STY7866_RS04080;Dbxref=Genbank:WP_001104338.1;Name=WP_001104338.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457257.1;locus_tag=STY7866_RS04080;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_001104338.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	2246	3067	.	-	.	ID=gene-STY7866_RS04085;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=STY7866_RS04085
NZ_CAAR01000114.1	Protein Homology	CDS	2246	3067	.	-	0	ID=cds-WP_000083163.1;Parent=gene-STY7866_RS04085;Dbxref=Genbank:WP_000083163.1;Name=WP_000083163.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457256.1;locus_tag=STY7866_RS04085;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_000083163.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	pseudogene	3064	3980	.	-	.	ID=gene-STY7866_RS04090;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=pseudogene;locus_tag=STY7866_RS04090;pseudo=true
NZ_CAAR01000114.1	Protein Homology	CDS	3064	3980	.	-	0	ID=cds-STY7866_RS04090;Parent=gene-STY7866_RS04090;Note=frameshifted;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457255.1;locus_tag=STY7866_RS04090;product=iron/manganese ABC transporter substrate-binding protein SitA;pseudo=true;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	4162	4506	.	+	.	ID=gene-STY7866_RS04095;Name=STY7866_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04095
NZ_CAAR01000114.1	Protein Homology	CDS	4162	4506	.	+	0	ID=cds-WP_001117938.1;Parent=gene-STY7866_RS04095;Dbxref=Genbank:WP_001117938.1;Name=WP_001117938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457254.1;locus_tag=STY7866_RS04095;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_001117938.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	4568	6646	.	-	.	ID=gene-STY7866_RS04100;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=STY7866_RS04100
NZ_CAAR01000114.1	Protein Homology	CDS	4568	6646	.	-	0	ID=cds-WP_000122695.1;Parent=gene-STY7866_RS04100;Dbxref=Genbank:WP_000122695.1;Name=WP_000122695.1;gbkey=CDS;gene=flhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457253.1;locus_tag=STY7866_RS04100;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_000122695.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	6865	7875	.	-	.	ID=gene-STY7866_RS04105;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=STY7866_RS04105
NZ_CAAR01000114.1	Protein Homology	CDS	6865	7875	.	-	0	ID=cds-WP_001059959.1;Parent=gene-STY7866_RS04105;Dbxref=Genbank:WP_001059959.1;Name=WP_001059959.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=STY7866_RS04105;product=hydrogenase expression/formation protein HypE;protein_id=WP_001059959.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	7872	8993	.	-	.	ID=gene-STY7866_RS04110;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=STY7866_RS04110
NZ_CAAR01000114.1	Protein Homology	CDS	7872	8993	.	-	0	ID=cds-WP_001212958.1;Parent=gene-STY7866_RS04110;Dbxref=Genbank:WP_001212958.1;Name=WP_001212958.1;gbkey=CDS;gene=hypD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457251.1;locus_tag=STY7866_RS04110;product=hydrogenase formation protein HypD;protein_id=WP_001212958.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	8993	9265	.	-	.	ID=gene-STY7866_RS04115;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=STY7866_RS04115
NZ_CAAR01000114.1	Protein Homology	CDS	8993	9265	.	-	0	ID=cds-WP_000334871.1;Parent=gene-STY7866_RS04115;Dbxref=Genbank:WP_000334871.1;Name=WP_000334871.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457250.1;locus_tag=STY7866_RS04115;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334871.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	9256	10128	.	-	.	ID=gene-STY7866_RS04120;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=STY7866_RS04120
NZ_CAAR01000114.1	Protein Homology	CDS	9256	10128	.	-	0	ID=cds-WP_000337646.1;Parent=gene-STY7866_RS04120;Dbxref=Genbank:WP_000337646.1;Name=WP_000337646.1;gbkey=CDS;gene=hypB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457249.1;locus_tag=STY7866_RS04120;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337646.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	10198	10554	.	-	.	ID=gene-STY7866_RS04125;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=STY7866_RS04125
NZ_CAAR01000114.1	Protein Homology	CDS	10198	10554	.	-	0	ID=cds-WP_000544461.1;Parent=gene-STY7866_RS04125;Dbxref=Genbank:WP_000544461.1;Name=WP_000544461.1;gbkey=CDS;gene=hypA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457248.1;locus_tag=STY7866_RS04125;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544461.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	10764	11225	.	+	.	ID=gene-STY7866_RS04130;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=STY7866_RS04130
NZ_CAAR01000114.1	Protein Homology	CDS	10764	11225	.	+	0	ID=cds-WP_000158074.1;Parent=gene-STY7866_RS04130;Dbxref=Genbank:WP_000158074.1;Name=WP_000158074.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457247.1;locus_tag=STY7866_RS04130;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158074.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	11371	11979	.	+	.	ID=gene-STY7866_RS04135;Name=STY7866_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04135
NZ_CAAR01000114.1	Protein Homology	CDS	11371	11979	.	+	0	ID=cds-WP_001079164.1;Parent=gene-STY7866_RS04135;Dbxref=Genbank:WP_001079164.1;Name=WP_001079164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457246.1;locus_tag=STY7866_RS04135;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001079164.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	11979	13805	.	+	.	ID=gene-STY7866_RS04140;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=STY7866_RS04140
NZ_CAAR01000114.1	Protein Homology	CDS	11979	13805	.	+	0	ID=cds-WP_000097032.1;Parent=gene-STY7866_RS04140;Dbxref=Genbank:WP_000097032.1;Name=WP_000097032.1;gbkey=CDS;gene=hycC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457245.1;locus_tag=STY7866_RS04140;product=formate hydrogenlyase subunit 3;protein_id=WP_000097032.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	13808	14731	.	+	.	ID=gene-STY7866_RS04145;Name=STY7866_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04145
NZ_CAAR01000114.1	Protein Homology	CDS	13808	14731	.	+	0	ID=cds-WP_000110563.1;Parent=gene-STY7866_RS04145;Dbxref=Genbank:WP_000110563.1;Name=WP_000110563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457244.1;locus_tag=STY7866_RS04145;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_000110563.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	14749	16458	.	+	.	ID=gene-STY7866_RS04150;Name=STY7866_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04150
NZ_CAAR01000114.1	Protein Homology	CDS	14749	16458	.	+	0	ID=cds-WP_000461354.1;Parent=gene-STY7866_RS04150;Dbxref=Genbank:WP_000461354.1;Name=WP_000461354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=STY7866_RS04150;product=hydrogenase large subunit;protein_id=WP_000461354.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	16468	17010	.	+	.	ID=gene-STY7866_RS04155;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=STY7866_RS04155
NZ_CAAR01000114.1	Protein Homology	CDS	16468	17010	.	+	0	ID=cds-WP_000493767.1;Parent=gene-STY7866_RS04155;Dbxref=Genbank:WP_000493767.1;Name=WP_000493767.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457242.1;locus_tag=STY7866_RS04155;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493767.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	17010	17777	.	+	.	ID=gene-STY7866_RS04160;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=STY7866_RS04160
NZ_CAAR01000114.1	Protein Homology	CDS	17010	17777	.	+	0	ID=cds-WP_000067418.1;Parent=gene-STY7866_RS04160;Dbxref=Genbank:WP_000067418.1;Name=WP_000067418.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457241.1;locus_tag=STY7866_RS04160;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067418.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	17774	18184	.	+	.	ID=gene-STY7866_RS04165;Name=hycH;gbkey=Gene;gene=hycH;gene_biotype=protein_coding;locus_tag=STY7866_RS04165
NZ_CAAR01000114.1	Protein Homology	CDS	17774	18184	.	+	0	ID=cds-WP_000003725.1;Parent=gene-STY7866_RS04165;Dbxref=Genbank:WP_000003725.1;Name=WP_000003725.1;gbkey=CDS;gene=hycH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457240.1;locus_tag=STY7866_RS04165;product=HycH family protein;protein_id=WP_000003725.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	18177	18647	.	+	.	ID=gene-STY7866_RS04170;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=STY7866_RS04170
NZ_CAAR01000114.1	Protein Homology	CDS	18177	18647	.	+	0	ID=cds-WP_000132980.1;Parent=gene-STY7866_RS04170;Dbxref=Genbank:WP_000132980.1;Name=WP_000132980.1;gbkey=CDS;gene=hycI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457239.1;locus_tag=STY7866_RS04170;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132980.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	18674	19483	.	+	.	ID=gene-STY7866_RS04175;Name=STY7866_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04175
NZ_CAAR01000114.1	Protein Homology	CDS	18674	19483	.	+	0	ID=cds-WP_000936688.1;Parent=gene-STY7866_RS04175;Dbxref=Genbank:WP_000936688.1;Name=WP_000936688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=STY7866_RS04175;product=hypothetical protein;protein_id=WP_000936688.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	19684	20229	.	+	.	ID=gene-STY7866_RS04180;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=STY7866_RS04180
NZ_CAAR01000114.1	Protein Homology	CDS	19684	20229	.	+	0	ID=cds-WP_001078791.1;Parent=gene-STY7866_RS04180;Dbxref=Genbank:WP_001078791.1;Name=WP_001078791.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457237.1;locus_tag=STY7866_RS04180;product=electron transport protein HydN;protein_id=WP_001078791.1;transl_table=11
NZ_CAAR01000114.1	RefSeq	gene	20375	22287	.	+	.	ID=gene-STY7866_RS04185;Name=hypF;end_range=22287,.;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=STY7866_RS04185;partial=true
NZ_CAAR01000114.1	Protein Homology	CDS	20375	22287	.	+	0	ID=cds-WP_000963416.1;Parent=gene-STY7866_RS04185;Dbxref=Genbank:WP_000963416.1;Name=WP_000963416.1;end_range=22287,.;gbkey=CDS;gene=hypF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457236.1;locus_tag=STY7866_RS04185;partial=true;product=carbamoyltransferase HypF;protein_id=WP_000963416.1;transl_table=11
##sequence-region NZ_CAAR01000113.1 1 9603
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000113.1	RefSeq	region	1	9603	.	+	.	ID=NZ_CAAR01000113.1:1..9603;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000113.1	RefSeq	gene	37	672	.	-	.	ID=gene-STY7866_RS04020;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=STY7866_RS04020
NZ_CAAR01000113.1	Protein Homology	CDS	37	672	.	-	0	ID=cds-WP_000829025.1;Parent=gene-STY7866_RS04020;Dbxref=Genbank:WP_000829025.1;Name=WP_000829025.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458015.1;locus_tag=STY7866_RS04020;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829025.1;transl_table=11
NZ_CAAR01000113.1	RefSeq	gene	669	1571	.	-	.	ID=gene-STY7866_RS04025;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=STY7866_RS04025
NZ_CAAR01000113.1	Protein Homology	CDS	669	1571	.	-	0	ID=cds-WP_000331359.1;Parent=gene-STY7866_RS04025;Dbxref=Genbank:WP_000331359.1;Name=WP_000331359.1;gbkey=CDS;gene=fdxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458014.1;locus_tag=STY7866_RS04025;product=formate dehydrogenase subunit beta;protein_id=WP_000331359.1;transl_table=11
NZ_CAAR01000113.1	RefSeq	gene	1584	4634	.	-	.	ID=gene-STY7866_RS04030;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=STY7866_RS04030
NZ_CAAR01000113.1	Protein Homology	CDS	1584	4634	.	-	0	ID=cds-WP_010989259.1;Parent=gene-STY7866_RS04030;Dbxref=Genbank:WP_010989259.1;Name=WP_010989259.1;gbkey=CDS;gene=fdnG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458013.1;locus_tag=STY7866_RS04030;product=formate dehydrogenase-N subunit alpha;protein_id=WP_010989259.1;transl_except=(pos:complement(4047..4049)%2Caa:Sec);transl_table=11
NZ_CAAR01000113.1	RefSeq	gene	4829	5665	.	+	.	ID=gene-STY7866_RS04040;Name=STY7866_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04040
NZ_CAAR01000113.1	Protein Homology	CDS	4829	5665	.	+	0	ID=cds-WP_001059746.1;Parent=gene-STY7866_RS04040;Dbxref=Genbank:WP_001059746.1;Name=WP_001059746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=STY7866_RS04040;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_001059746.1;transl_table=11
NZ_CAAR01000113.1	RefSeq	gene	5941	6972	.	-	.	ID=gene-STY7866_RS04045;Name=STY7866_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04045
NZ_CAAR01000113.1	Protein Homology	CDS	5941	6972	.	-	0	ID=cds-WP_000710969.1;Parent=gene-STY7866_RS04045;Dbxref=Genbank:WP_000710969.1;Name=WP_000710969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458011.1;locus_tag=STY7866_RS04045;product=YiiG family protein;protein_id=WP_000710969.1;transl_table=11
NZ_CAAR01000113.1	RefSeq	gene	7154	8254	.	+	.	ID=gene-STY7866_RS04050;Name=STY7866_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04050
NZ_CAAR01000113.1	Protein Homology	CDS	7154	8254	.	+	0	ID=cds-WP_000828045.1;Parent=gene-STY7866_RS04050;Dbxref=Genbank:WP_000828045.1;Name=WP_000828045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458010.1;locus_tag=STY7866_RS04050;product=DUF3829 domain-containing protein;protein_id=WP_000828045.1;transl_table=11
NZ_CAAR01000113.1	RefSeq	pseudogene	8597	8920	.	-	.	ID=gene-STY7866_RS04055;Name=STY7866_RS04055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS04055;pseudo=true
NZ_CAAR01000113.1	Protein Homology	CDS	8597	8920	.	-	0	ID=cds-STY7866_RS04055;Parent=gene-STY7866_RS04055;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=STY7866_RS04055;product=AzlD domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000113.1	RefSeq	gene	8920	9579	.	-	.	ID=gene-STY7866_RS04060;Name=STY7866_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04060
NZ_CAAR01000113.1	Protein Homology	CDS	8920	9579	.	-	0	ID=cds-WP_000683586.1;Parent=gene-STY7866_RS04060;Dbxref=Genbank:WP_000683586.1;Name=WP_000683586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458008.1;locus_tag=STY7866_RS04060;product=AzlC family ABC transporter permease;protein_id=WP_000683586.1;transl_table=11
##sequence-region NZ_CAAR01000112.1 1 20479
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000112.1	RefSeq	region	1	20479	.	+	.	ID=NZ_CAAR01000112.1:1..20479;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000112.1	RefSeq	gene	1	2122	.	-	.	ID=gene-STY7866_RS03935;Name=STY7866_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03935;partial=true;start_range=.,1
NZ_CAAR01000112.1	Protein Homology	CDS	1	2122	.	-	0	ID=cds-WP_000040362.1;Parent=gene-STY7866_RS03935;Dbxref=Genbank:WP_000040362.1;Name=WP_000040362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455919.1;locus_tag=STY7866_RS03935;partial=true;product=nitrate reductase subunit alpha;protein_id=WP_000040362.1;start_range=.,1;transl_table=11
NZ_CAAR01000112.1	RefSeq	gene	2214	3602	.	-	.	ID=gene-STY7866_RS03940;Name=STY7866_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03940
NZ_CAAR01000112.1	Protein Homology	CDS	2214	3602	.	-	0	ID=cds-WP_000198249.1;Parent=gene-STY7866_RS03940;Dbxref=Genbank:WP_000198249.1;Name=WP_000198249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455920.1;locus_tag=STY7866_RS03940;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_000198249.1;transl_table=11
NZ_CAAR01000112.1	RefSeq	gene	3817	4395	.	-	.	ID=gene-STY7866_RS03945;Name=STY7866_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03945
NZ_CAAR01000112.1	Protein Homology	CDS	3817	4395	.	-	0	ID=cds-WP_000121044.1;Parent=gene-STY7866_RS03945;Dbxref=Genbank:WP_000121044.1;Name=WP_000121044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455921.1;locus_tag=STY7866_RS03945;product=TetR family transcriptional regulator;protein_id=WP_000121044.1;transl_table=11
NZ_CAAR01000112.1	RefSeq	gene	4513	6000	.	+	.	ID=gene-STY7866_RS03950;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=STY7866_RS03950
NZ_CAAR01000112.1	Protein Homology	CDS	4513	6000	.	+	0	ID=cds-WP_000489748.1;Parent=gene-STY7866_RS03950;Dbxref=Genbank:WP_000489748.1;Name=WP_000489748.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455922.1;locus_tag=STY7866_RS03950;product=methyl viologen efflux MFS transporter SmvA;protein_id=WP_000489748.1;transl_table=11
NZ_CAAR01000112.1	RefSeq	pseudogene	6025	6403	.	-	.	ID=gene-STY7866_RS03955;Name=STY7866_RS03955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03955;pseudo=true
NZ_CAAR01000112.1	Protein Homology	CDS	6025	6403	.	-	0	ID=cds-STY7866_RS03955;Parent=gene-STY7866_RS03955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=STY7866_RS03955;product=GFA family protein;pseudo=true;transl_table=11
NZ_CAAR01000112.1	RefSeq	pseudogene	6519	7649	.	+	.	ID=gene-STY7866_RS03960;Name=STY7866_RS03960;end_range=7649,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03960;partial=true;pseudo=true;start_range=.,6519
NZ_CAAR01000112.1	Protein Homology	CDS	6519	7649	.	+	0	ID=cds-STY7866_RS03960;Parent=gene-STY7866_RS03960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=7649,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=STY7866_RS03960;partial=true;product=molybdopterin-dependent oxidoreductase;pseudo=true;start_range=.,6519;transl_table=11
NZ_CAAR01000112.1	RefSeq	gene	7642	8652	.	-	.	ID=gene-STY7866_RS03965;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=STY7866_RS03965
NZ_CAAR01000112.1	Protein Homology	CDS	7642	8652	.	-	0	ID=cds-WP_000642447.1;Parent=gene-STY7866_RS03965;Dbxref=Genbank:WP_000642447.1;Name=WP_000642447.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455923.1;locus_tag=STY7866_RS03965;product=alcohol dehydrogenase AdhP;protein_id=WP_000642447.1;transl_table=11
NZ_CAAR01000112.1	RefSeq	gene	8934	10631	.	-	.	ID=gene-STY7866_RS03970;Name=STY7866_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03970
NZ_CAAR01000112.1	Protein Homology	CDS	8934	10631	.	-	0	ID=cds-WP_000450511.1;Parent=gene-STY7866_RS03970;Dbxref=Genbank:WP_000450511.1;Name=WP_000450511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=STY7866_RS03970;product=NAD-dependent malic enzyme;protein_id=WP_000450511.1;transl_table=11
NZ_CAAR01000112.1	RefSeq	gene	10808	10951	.	-	.	ID=gene-STY7866_RS03975;Name=STY7866_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03975
NZ_CAAR01000112.1	Protein Homology	CDS	10808	10951	.	-	0	ID=cds-WP_000841559.1;Parent=gene-STY7866_RS03975;Dbxref=Genbank:WP_000841559.1;Name=WP_000841559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455925.1;locus_tag=STY7866_RS03975;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841559.1;transl_table=11
NZ_CAAR01000112.1	RefSeq	gene	11046	11261	.	-	.	ID=gene-STY7866_RS03980;Name=STY7866_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03980
NZ_CAAR01000112.1	Protein Homology	CDS	11046	11261	.	-	0	ID=cds-WP_000495700.1;Parent=gene-STY7866_RS03980;Dbxref=Genbank:WP_000495700.1;Name=WP_000495700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455926.1;locus_tag=STY7866_RS03980;product=biofilm-dependent modulation protein;protein_id=WP_000495700.1;transl_table=11
NZ_CAAR01000112.1	RefSeq	gene	11773	12204	.	+	.	ID=gene-STY7866_RS03985;Name=STY7866_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03985
NZ_CAAR01000112.1	Protein Homology	CDS	11773	12204	.	+	0	ID=cds-WP_000152297.1;Parent=gene-STY7866_RS03985;Dbxref=Genbank:WP_000152297.1;Name=WP_000152297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455927.1;locus_tag=STY7866_RS03985;product=OsmC family protein;protein_id=WP_000152297.1;transl_table=11
NZ_CAAR01000112.1	RefSeq	gene	12325	13236	.	-	.	ID=gene-STY7866_RS03990;Name=hlyE;gbkey=Gene;gene=hlyE;gene_biotype=protein_coding;locus_tag=STY7866_RS03990
NZ_CAAR01000112.1	Protein Homology	CDS	12325	13236	.	-	0	ID=cds-WP_001681583.1;Parent=gene-STY7866_RS03990;Dbxref=Genbank:WP_001681583.1;Name=WP_001681583.1;gbkey=CDS;gene=hlyE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415700.4;locus_tag=STY7866_RS03990;product=hemolysin HlyE;protein_id=WP_001681583.1;transl_table=11
NZ_CAAR01000112.1	RefSeq	gene	13367	14071	.	-	.	ID=gene-STY7866_RS03995;Name=STY7866_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03995
NZ_CAAR01000112.1	Protein Homology	CDS	13367	14071	.	-	0	ID=cds-WP_010989161.1;Parent=gene-STY7866_RS03995;Dbxref=Genbank:WP_010989161.1;Name=WP_010989161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455929.1;locus_tag=STY7866_RS03995;product=hypothetical protein;protein_id=WP_010989161.1;transl_table=11
NZ_CAAR01000112.1	RefSeq	gene	14284	14490	.	-	.	ID=gene-STY7866_RS26895;Name=STY7866_RS26895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26895
NZ_CAAR01000112.1	Protein Homology	CDS	14284	14490	.	-	0	ID=cds-WP_071524993.1;Parent=gene-STY7866_RS26895;Dbxref=Genbank:WP_071524993.1;Name=WP_071524993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542740.1;locus_tag=STY7866_RS26895;product=hypothetical protein;protein_id=WP_071524993.1;transl_table=11
NZ_CAAR01000112.1	RefSeq	gene	14771	15100	.	+	.	ID=gene-STY7866_RS04000;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=STY7866_RS04000
NZ_CAAR01000112.1	Protein Homology	CDS	14771	15100	.	+	0	ID=cds-WP_001032161.1;Parent=gene-STY7866_RS04000;Dbxref=Genbank:WP_001032161.1;Name=WP_001032161.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455930.1;locus_tag=STY7866_RS04000;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001032161.1;transl_table=11
NZ_CAAR01000112.1	RefSeq	gene	15243	16028	.	+	.	ID=gene-STY7866_RS04005;Name=STY7866_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS04005
NZ_CAAR01000112.1	Protein Homology	CDS	15243	16028	.	+	0	ID=cds-WP_000698597.1;Parent=gene-STY7866_RS04005;Dbxref=Genbank:WP_000698597.1;Name=WP_000698597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455931.1;locus_tag=STY7866_RS04005;product=OBAP family protein;protein_id=WP_000698597.1;transl_table=11
NZ_CAAR01000112.1	RefSeq	gene	16200	17942	.	+	.	ID=gene-STY7866_RS04010;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=STY7866_RS04010
NZ_CAAR01000112.1	Protein Homology	CDS	16200	17942	.	+	0	ID=cds-WP_049783572.1;Parent=gene-STY7866_RS04010;Dbxref=Genbank:WP_049783572.1;Name=WP_049783572.1;gbkey=CDS;gene=treZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455932.1;locus_tag=STY7866_RS04010;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_049783572.1;transl_table=11
NZ_CAAR01000112.1	RefSeq	gene	17939	20467	.	+	.	ID=gene-STY7866_RS04015;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=STY7866_RS04015
NZ_CAAR01000112.1	Protein Homology	CDS	17939	20467	.	+	0	ID=cds-WP_000613170.1;Parent=gene-STY7866_RS04015;Dbxref=Genbank:WP_000613170.1;Name=WP_000613170.1;gbkey=CDS;gene=treY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455933.1;locus_tag=STY7866_RS04015;product=malto-oligosyltrehalose synthase;protein_id=WP_000613170.1;transl_table=11
##sequence-region NZ_CAAR01000111.1 1 28795
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000111.1	RefSeq	region	1	28795	.	+	.	ID=NZ_CAAR01000111.1:1..28795;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000111.1	RefSeq	pseudogene	1	235	.	-	.	ID=gene-STY7866_RS26885;Name=STY7866_RS26885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26885;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000111.1	Protein Homology	CDS	1	235	.	-	0	ID=cds-STY7866_RS26885;Parent=gene-STY7866_RS26885;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=STY7866_RS26885;partial=true;product=aryl-sulfate sulfotransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	691	1008	.	-	.	ID=gene-STY7866_RS03825;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=STY7866_RS03825
NZ_CAAR01000111.1	Protein Homology	CDS	691	1008	.	-	0	ID=cds-WP_000852811.1;Parent=gene-STY7866_RS03825;Dbxref=Genbank:WP_000852811.1;Name=WP_000852811.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=STY7866_RS03825;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852811.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	1273	2433	.	+	.	ID=gene-STY7866_RS03830;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=STY7866_RS03830
NZ_CAAR01000111.1	Protein Homology	CDS	1273	2433	.	+	0	ID=cds-WP_000197208.1;Parent=gene-STY7866_RS03830;Dbxref=Genbank:WP_000197208.1;Name=WP_000197208.1;gbkey=CDS;gene=metB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457953.1;locus_tag=STY7866_RS03830;product=cystathionine gamma-synthase;protein_id=WP_000197208.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	pseudogene	2436	4866	.	+	.	ID=gene-STY7866_RS03835;Name=STY7866_RS03835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03835;pseudo=true
NZ_CAAR01000111.1	Protein Homology	CDS	2436	4866	.	+	0	ID=cds-STY7866_RS03835;Parent=gene-STY7866_RS03835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=STY7866_RS03835;product=bifunctional aspartate kinase/homoserine dehydrogenase II;pseudo=true;transl_table=11
NZ_CAAR01000111.1	RefSeq	pseudogene	4929	5359	.	-	.	ID=gene-STY7866_RS26890;Name=STY7866_RS26890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26890;pseudo=true
NZ_CAAR01000111.1	Protein Homology	CDS	4929	5359	.	-	0	ID=cds-STY7866_RS26890;Parent=gene-STY7866_RS26890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000401539.1;locus_tag=STY7866_RS26890;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	5593	6717	.	-	.	ID=gene-STY7866_RS03845;Name=STY7866_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03845
NZ_CAAR01000111.1	Protein Homology	CDS	5593	6717	.	-	0	ID=cds-WP_001134817.1;Parent=gene-STY7866_RS03845;Dbxref=Genbank:WP_001134817.1;Name=WP_001134817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457951.1;locus_tag=STY7866_RS03845;product=hypothetical protein;protein_id=WP_001134817.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	6853	8409	.	+	.	ID=gene-STY7866_RS03850;Name=STY7866_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03850
NZ_CAAR01000111.1	Protein Homology	CDS	6853	8409	.	+	0	ID=cds-WP_000865256.1;Parent=gene-STY7866_RS03850;Dbxref=Genbank:WP_000865256.1;Name=WP_000865256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457950.1;locus_tag=STY7866_RS03850;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_000865256.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	8653	9912	.	+	.	ID=gene-STY7866_RS03860;Name=STY7866_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03860
NZ_CAAR01000111.1	Protein Homology	CDS	8653	9912	.	+	0	ID=cds-WP_010989256.1;Parent=gene-STY7866_RS03860;Dbxref=Genbank:WP_010989256.1;Name=WP_010989256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457949.1;locus_tag=STY7866_RS03860;product=serine hydroxymethyltransferase;protein_id=WP_010989256.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	9909	11015	.	+	.	ID=gene-STY7866_RS03865;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=STY7866_RS03865
NZ_CAAR01000111.1	Protein Homology	CDS	9909	11015	.	+	0	ID=cds-WP_000976816.1;Parent=gene-STY7866_RS03865;Dbxref=Genbank:WP_000976816.1;Name=WP_000976816.1;gbkey=CDS;gene=alr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457948.1;locus_tag=STY7866_RS03865;product=alanine racemase;protein_id=WP_000976816.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	10960	12441	.	-	.	ID=gene-STY7866_RS03870;Name=STY7866_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03870
NZ_CAAR01000111.1	Protein Homology	CDS	10960	12441	.	-	0	ID=cds-WP_001090459.1;Parent=gene-STY7866_RS03870;Dbxref=Genbank:WP_001090459.1;Name=WP_001090459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457947.1;locus_tag=STY7866_RS03870;product=PLP-dependent aminotransferase family protein;protein_id=WP_001090459.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	12407	12610	.	+	.	ID=gene-STY7866_RS03875;Name=STY7866_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03875
NZ_CAAR01000111.1	Protein Homology	CDS	12407	12610	.	+	0	ID=cds-WP_000562866.1;Parent=gene-STY7866_RS03875;Dbxref=Genbank:WP_000562866.1;Name=WP_000562866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575254.1;locus_tag=STY7866_RS03875;product=hypothetical protein;protein_id=WP_000562866.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	12720	13610	.	+	.	ID=gene-STY7866_RS03880;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=STY7866_RS03880
NZ_CAAR01000111.1	Protein Homology	CDS	12720	13610	.	+	0	ID=cds-WP_000007507.1;Parent=gene-STY7866_RS03880;Dbxref=Genbank:WP_000007507.1;Name=WP_000007507.1;gbkey=CDS;gene=metF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457946.1;locus_tag=STY7866_RS03880;product=methylenetetrahydrofolate reductase;protein_id=WP_000007507.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	13775	15955	.	+	.	ID=gene-STY7866_RS03885;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=STY7866_RS03885
NZ_CAAR01000111.1	Protein Homology	CDS	13775	15955	.	+	0	ID=cds-WP_000108110.1;Parent=gene-STY7866_RS03885;Dbxref=Genbank:WP_000108110.1;Name=WP_000108110.1;gbkey=CDS;gene=katG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457945.1;locus_tag=STY7866_RS03885;product=catalase/peroxidase HPI;protein_id=WP_000108110.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	16062	17165	.	-	.	ID=gene-STY7866_RS03890;Name=STY7866_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03890
NZ_CAAR01000111.1	Protein Homology	CDS	16062	17165	.	-	0	ID=cds-WP_000374033.1;Parent=gene-STY7866_RS03890;Dbxref=Genbank:WP_000374033.1;Name=WP_000374033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457944.1;locus_tag=STY7866_RS03890;product=glycerol dehydrogenase;protein_id=WP_000374033.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	17177	17839	.	-	.	ID=gene-STY7866_RS03895;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=STY7866_RS03895
NZ_CAAR01000111.1	Protein Homology	CDS	17177	17839	.	-	0	ID=cds-WP_000424865.1;Parent=gene-STY7866_RS03895;Dbxref=Genbank:WP_000424865.1;Name=WP_000424865.1;gbkey=CDS;gene=fsa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457943.1;locus_tag=STY7866_RS03895;product=fructose-6-phosphate aldolase;protein_id=WP_000424865.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	18094	18930	.	-	.	ID=gene-STY7866_RS03900;Name=STY7866_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03900
NZ_CAAR01000111.1	Protein Homology	CDS	18094	18930	.	-	0	ID=cds-WP_000274601.1;Parent=gene-STY7866_RS03900;Dbxref=Genbank:WP_000274601.1;Name=WP_000274601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457942.1;locus_tag=STY7866_RS03900;product=helix-turn-helix transcriptional regulator;protein_id=WP_000274601.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	19091	20824	.	-	.	ID=gene-STY7866_RS03905;Name=cptA;gbkey=Gene;gene=cptA;gene_biotype=protein_coding;locus_tag=STY7866_RS03905
NZ_CAAR01000111.1	Protein Homology	CDS	19091	20824	.	-	0	ID=cds-WP_001192092.1;Parent=gene-STY7866_RS03905;Dbxref=Genbank:WP_001192092.1;Name=WP_001192092.1;gbkey=CDS;gene=cptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457941.1;locus_tag=STY7866_RS03905;product=phosphoethanolamine transferase CptA;protein_id=WP_001192092.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	21026	23677	.	-	.	ID=gene-STY7866_RS03910;Name=STY7866_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03910
NZ_CAAR01000111.1	Protein Homology	CDS	21026	23677	.	-	0	ID=cds-WP_001005544.1;Parent=gene-STY7866_RS03910;Dbxref=Genbank:WP_001005544.1;Name=WP_001005544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457940.1;locus_tag=STY7866_RS03910;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005544.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	24046	25197	.	-	.	ID=gene-STY7866_RS03915;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=STY7866_RS03915
NZ_CAAR01000111.1	Protein Homology	CDS	24046	25197	.	-	0	ID=cds-WP_000800208.1;Parent=gene-STY7866_RS03915;Dbxref=Genbank:WP_000800208.1;Name=WP_000800208.1;gbkey=CDS;gene=argE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122768.1;locus_tag=STY7866_RS03915;product=acetylornithine deacetylase;protein_id=WP_000800208.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	25286	26290	.	+	.	ID=gene-STY7866_RS03920;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=STY7866_RS03920
NZ_CAAR01000111.1	Protein Homology	CDS	25286	26290	.	+	0	ID=cds-WP_000935332.1;Parent=gene-STY7866_RS03920;Dbxref=Genbank:WP_000935332.1;Name=WP_000935332.1;gbkey=CDS;gene=argC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=STY7866_RS03920;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935332.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	gene	26298	27074	.	+	.	ID=gene-STY7866_RS03925;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=STY7866_RS03925
NZ_CAAR01000111.1	Protein Homology	CDS	26298	27074	.	+	0	ID=cds-WP_001575262.1;Parent=gene-STY7866_RS03925;Dbxref=Genbank:WP_001575262.1;Name=WP_001575262.1;gbkey=CDS;gene=argB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=STY7866_RS03925;product=acetylglutamate kinase;protein_id=WP_001575262.1;transl_table=11
NZ_CAAR01000111.1	RefSeq	pseudogene	27192	28567	.	+	.	ID=gene-STY7866_RS03930;Name=argH;gbkey=Gene;gene=argH;gene_biotype=pseudogene;locus_tag=STY7866_RS03930;pseudo=true
NZ_CAAR01000111.1	Protein Homology	CDS	27192	28567	.	+	0	ID=cds-STY7866_RS03930;Parent=gene-STY7866_RS03930;Note=frameshifted;gbkey=CDS;gene=argH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457936.1;locus_tag=STY7866_RS03930;product=argininosuccinate lyase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000110.1 1 6406
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000110.1	RefSeq	region	1	6406	.	+	.	ID=NZ_CAAR01000110.1:1..6406;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000110.1	RefSeq	pseudogene	1	141	.	+	.	ID=gene-STY7866_RS26875;Name=STY7866_RS26875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26875;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000110.1	Protein Homology	CDS	1	141	.	+	0	ID=cds-STY7866_RS26875;Parent=gene-STY7866_RS26875;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455504.1;locus_tag=STY7866_RS26875;partial=true;product=ead/Ea22-like family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000110.1	RefSeq	pseudogene	141	615	.	+	.	ID=gene-STY7866_RS03730;Name=STY7866_RS03730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03730;pseudo=true
NZ_CAAR01000110.1	Protein Homology	CDS	141	615	.	+	0	ID=cds-STY7866_RS03730;Parent=gene-STY7866_RS03730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455505.1;locus_tag=STY7866_RS03730;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11
NZ_CAAR01000110.1	RefSeq	gene	619	1191	.	+	.	ID=gene-STY7866_RS03735;Name=STY7866_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03735
NZ_CAAR01000110.1	Protein Homology	CDS	619	1191	.	+	0	ID=cds-WP_000208074.1;Parent=gene-STY7866_RS03735;Dbxref=Genbank:WP_000208074.1;Name=WP_000208074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455506.1;locus_tag=STY7866_RS03735;product=DUF550 domain-containing protein;protein_id=WP_000208074.1;transl_table=11
NZ_CAAR01000110.1	RefSeq	gene	1285	1551	.	+	.	ID=gene-STY7866_RS03740;Name=STY7866_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03740
NZ_CAAR01000110.1	Protein Homology	CDS	1285	1551	.	+	0	ID=cds-WP_001220318.1;Parent=gene-STY7866_RS03740;Dbxref=Genbank:WP_001220318.1;Name=WP_001220318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455507.1;locus_tag=STY7866_RS03740;product=hypothetical protein;protein_id=WP_001220318.1;transl_table=11
NZ_CAAR01000110.1	RefSeq	gene	1633	1794	.	+	.	ID=gene-STY7866_RS26880;Name=STY7866_RS26880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26880
NZ_CAAR01000110.1	Protein Homology	CDS	1633	1794	.	+	0	ID=cds-WP_010989139.1;Parent=gene-STY7866_RS26880;Dbxref=Genbank:WP_010989139.1;Name=WP_010989139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455508.1;locus_tag=STY7866_RS26880;product=hypothetical protein;protein_id=WP_010989139.1;transl_table=11
NZ_CAAR01000110.1	RefSeq	gene	2037	2216	.	+	.	ID=gene-STY7866_RS03750;Name=STY7866_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03750
NZ_CAAR01000110.1	Protein Homology	CDS	2037	2216	.	+	0	ID=cds-WP_000509711.1;Parent=gene-STY7866_RS03750;Dbxref=Genbank:WP_000509711.1;Name=WP_000509711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156674.1;locus_tag=STY7866_RS03750;product=hypothetical protein;protein_id=WP_000509711.1;transl_table=11
NZ_CAAR01000110.1	RefSeq	gene	2227	2724	.	+	.	ID=gene-STY7866_RS03755;Name=STY7866_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03755
NZ_CAAR01000110.1	Protein Homology	CDS	2227	2724	.	+	0	ID=cds-WP_000963896.1;Parent=gene-STY7866_RS03755;Dbxref=Genbank:WP_000963896.1;Name=WP_000963896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455510.1;locus_tag=STY7866_RS03755;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_000963896.1;transl_table=11
NZ_CAAR01000110.1	RefSeq	gene	2909	3148	.	+	.	ID=gene-STY7866_RS03760;Name=STY7866_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03760
NZ_CAAR01000110.1	Protein Homology	CDS	2909	3148	.	+	0	ID=cds-WP_001217670.1;Parent=gene-STY7866_RS03760;Dbxref=Genbank:WP_001217670.1;Name=WP_001217670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455511.1;locus_tag=STY7866_RS03760;product=DinI family protein;protein_id=WP_001217670.1;transl_table=11
NZ_CAAR01000110.1	RefSeq	gene	3138	3443	.	+	.	ID=gene-STY7866_RS03765;Name=STY7866_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03765
NZ_CAAR01000110.1	Protein Homology	CDS	3138	3443	.	+	0	ID=cds-WP_001574100.1;Parent=gene-STY7866_RS03765;Dbxref=Genbank:WP_001574100.1;Name=WP_001574100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455512.1;locus_tag=STY7866_RS03765;product=hypothetical protein;protein_id=WP_001574100.1;transl_table=11
NZ_CAAR01000110.1	RefSeq	gene	3483	4085	.	+	.	ID=gene-STY7866_RS03770;Name=STY7866_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03770
NZ_CAAR01000110.1	Protein Homology	CDS	3483	4085	.	+	0	ID=cds-WP_000929790.1;Parent=gene-STY7866_RS03770;Dbxref=Genbank:WP_000929790.1;Name=WP_000929790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455513.1;locus_tag=STY7866_RS03770;product=DUF1367 family protein;protein_id=WP_000929790.1;transl_table=11
NZ_CAAR01000110.1	RefSeq	gene	4085	4291	.	+	.	ID=gene-STY7866_RS03775;Name=STY7866_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03775
NZ_CAAR01000110.1	Protein Homology	CDS	4085	4291	.	+	0	ID=cds-WP_001241019.1;Parent=gene-STY7866_RS03775;Dbxref=Genbank:WP_001241019.1;Name=WP_001241019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528771.1;locus_tag=STY7866_RS03775;product=hypothetical protein;protein_id=WP_001241019.1;transl_table=11
NZ_CAAR01000110.1	RefSeq	gene	4294	4905	.	+	.	ID=gene-STY7866_RS03780;Name=STY7866_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03780
NZ_CAAR01000110.1	Protein Homology	CDS	4294	4905	.	+	0	ID=cds-WP_001096560.1;Parent=gene-STY7866_RS03780;Dbxref=Genbank:WP_001096560.1;Name=WP_001096560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455514.1;locus_tag=STY7866_RS03780;product=recombination protein NinG;protein_id=WP_001096560.1;transl_table=11
NZ_CAAR01000110.1	RefSeq	gene	4902	5048	.	+	.	ID=gene-STY7866_RS03785;Name=STY7866_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03785
NZ_CAAR01000110.1	Protein Homology	CDS	4902	5048	.	+	0	ID=cds-WP_001617856.1;Parent=gene-STY7866_RS03785;Dbxref=Genbank:WP_001617856.1;Name=WP_001617856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617856.1;locus_tag=STY7866_RS03785;product=YlcG family protein;protein_id=WP_001617856.1;transl_table=11
NZ_CAAR01000110.1	RefSeq	gene	5038	5835	.	+	.	ID=gene-STY7866_RS03790;Name=STY7866_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03790
NZ_CAAR01000110.1	Protein Homology	CDS	5038	5835	.	+	0	ID=cds-WP_001047634.1;Parent=gene-STY7866_RS03790;Dbxref=Genbank:WP_001047634.1;Name=WP_001047634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455515.1;locus_tag=STY7866_RS03790;product=antitermination protein;protein_id=WP_001047634.1;transl_table=11
NZ_CAAR01000110.1	RefSeq	gene	6234	6359	.	+	.	ID=gene-STY7866_RS03805;Name=STY7866_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03805
NZ_CAAR01000110.1	Protein Homology	CDS	6234	6359	.	+	0	ID=cds-WP_001534733.1;Parent=gene-STY7866_RS03805;Dbxref=Genbank:WP_001534733.1;Name=WP_001534733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455516.1;locus_tag=STY7866_RS03805;product=hypothetical protein;protein_id=WP_001534733.1;transl_table=11
##sequence-region NZ_CAAR01000109.1 1 7479
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000109.1	RefSeq	region	1	7479	.	+	.	ID=NZ_CAAR01000109.1:1..7479;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000109.1	RefSeq	pseudogene	1	197	.	-	.	ID=gene-STY7866_RS03700;Name=STY7866_RS03700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03700;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000109.1	Protein Homology	CDS	1	197	.	-	0	ID=cds-STY7866_RS03700;Parent=gene-STY7866_RS03700;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455754.1;locus_tag=STY7866_RS03700;partial=true;product=peptide ABC transporter permease;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000109.1	RefSeq	gene	319	1950	.	-	.	ID=gene-STY7866_RS03705;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=STY7866_RS03705
NZ_CAAR01000109.1	Protein Homology	CDS	319	1950	.	-	0	ID=cds-WP_001682191.1;Parent=gene-STY7866_RS03705;Dbxref=Genbank:WP_001682191.1;Name=WP_001682191.1;gbkey=CDS;gene=oppA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004593571.1;locus_tag=STY7866_RS03705;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001682191.1;transl_table=11
NZ_CAAR01000109.1	RefSeq	gene	2726	3373	.	-	.	ID=gene-STY7866_RS03710;Name=STY7866_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03710
NZ_CAAR01000109.1	Protein Homology	CDS	2726	3373	.	-	0	ID=cds-WP_000615840.1;Parent=gene-STY7866_RS03710;Dbxref=Genbank:WP_000615840.1;Name=WP_000615840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455752.1;locus_tag=STY7866_RS03710;product=YchE family NAAT transporter;protein_id=WP_000615840.1;transl_table=11
NZ_CAAR01000109.1	RefSeq	gene	3850	6528	.	+	.	ID=gene-STY7866_RS03715;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=STY7866_RS03715
NZ_CAAR01000109.1	Protein Homology	CDS	3850	6528	.	+	0	ID=cds-WP_000301680.1;Parent=gene-STY7866_RS03715;Dbxref=Genbank:WP_000301680.1;Name=WP_000301680.1;gbkey=CDS;gene=adhE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455751.1;locus_tag=STY7866_RS03715;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301680.1;transl_table=11
NZ_CAAR01000109.1	RefSeq	gene	6725	7342	.	-	.	ID=gene-STY7866_RS03720;Name=STY7866_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03720
NZ_CAAR01000109.1	Protein Homology	CDS	6725	7342	.	-	0	ID=cds-WP_000068097.1;Parent=gene-STY7866_RS03720;Dbxref=Genbank:WP_000068097.1;Name=WP_000068097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455750.1;locus_tag=STY7866_RS03720;product=thymidine kinase;protein_id=WP_000068097.1;transl_table=11
##sequence-region NZ_CAAR01000108.1 1 16085
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000108.1	RefSeq	region	1	16085	.	+	.	ID=NZ_CAAR01000108.1:1..16085;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000108.1	RefSeq	gene	1	428	.	-	.	ID=gene-STY7866_RS03625;Name=STY7866_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03625;partial=true;start_range=.,1
NZ_CAAR01000108.1	Protein Homology	CDS	1	428	.	-	0	ID=cds-WP_000084603.1;Parent=gene-STY7866_RS03625;Dbxref=Genbank:WP_000084603.1;Name=WP_000084603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=STY7866_RS03625;partial=true;product=molybdenum cofactor biosynthesis protein;protein_id=WP_000084603.1;start_range=.,1;transl_table=11
NZ_CAAR01000108.1	RefSeq	pseudogene	450	1440	.	-	.	ID=gene-STY7866_RS03630;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=pseudogene;locus_tag=STY7866_RS03630;pseudo=true
NZ_CAAR01000108.1	Protein Homology	CDS	450	1440	.	-	0	ID=cds-STY7866_RS03630;Parent=gene-STY7866_RS03630;Note=frameshifted;gbkey=CDS;gene=moaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455343.1;locus_tag=STY7866_RS03630;product=GTP 3'%2C8-cyclase MoaA;pseudo=true;transl_table=11
NZ_CAAR01000108.1	cmsearch	riboswitch	1428	1572	.	-	.	ID=id-NZ_CAAR01000108.1:1428..1572;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_CAAR01000108.1	RefSeq	gene	1837	2745	.	+	.	ID=gene-STY7866_RS03635;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=STY7866_RS03635
NZ_CAAR01000108.1	Protein Homology	CDS	1837	2745	.	+	0	ID=cds-WP_001246034.1;Parent=gene-STY7866_RS03635;Dbxref=Genbank:WP_001246034.1;Name=WP_001246034.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455342.1;locus_tag=STY7866_RS03635;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001246034.1;transl_table=11
NZ_CAAR01000108.1	RefSeq	pseudogene	2840	5105	.	-	.	ID=gene-STY7866_RS03640;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=pseudogene;locus_tag=STY7866_RS03640;pseudo=true
NZ_CAAR01000108.1	Protein Homology	CDS	2840	5105	.	-	0	ID=cds-STY7866_RS03640;Parent=gene-STY7866_RS03640;Note=frameshifted%3B internal stop;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=STY7866_RS03640;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;pseudo=true;transl_table=11
NZ_CAAR01000108.1	RefSeq	gene	5113	5286	.	-	.	ID=gene-STY7866_RS03645;Name=STY7866_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03645
NZ_CAAR01000108.1	Protein Homology	CDS	5113	5286	.	-	0	ID=cds-WP_001539544.1;Parent=gene-STY7866_RS03645;Dbxref=Genbank:WP_001539544.1;Name=WP_001539544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=STY7866_RS03645;product=hypothetical protein;protein_id=WP_001539544.1;transl_table=11
NZ_CAAR01000108.1	RefSeq	gene	5595	7616	.	-	.	ID=gene-STY7866_RS03650;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=STY7866_RS03650
NZ_CAAR01000108.1	Protein Homology	CDS	5595	7616	.	-	0	ID=cds-WP_000042501.1;Parent=gene-STY7866_RS03650;Dbxref=Genbank:WP_000042501.1;Name=WP_000042501.1;gbkey=CDS;gene=uvrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=STY7866_RS03650;product=excinuclease ABC subunit B;protein_id=WP_000042501.1;transl_table=11
NZ_CAAR01000108.1	RefSeq	gene	7613	7840	.	-	.	ID=gene-STY7866_RS26870;Name=STY7866_RS26870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26870
NZ_CAAR01000108.1	Protein Homology	CDS	7613	7840	.	-	0	ID=cds-WP_001752195.1;Parent=gene-STY7866_RS26870;Dbxref=Genbank:WP_001752195.1;Name=WP_001752195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752195.1;locus_tag=STY7866_RS26870;product=hypothetical protein;protein_id=WP_001752195.1;transl_table=11
NZ_CAAR01000108.1	RefSeq	gene	8267	8953	.	-	.	ID=gene-STY7866_RS03660;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=STY7866_RS03660
NZ_CAAR01000108.1	Protein Homology	CDS	8267	8953	.	-	0	ID=cds-WP_000167219.1;Parent=gene-STY7866_RS03660;Dbxref=Genbank:WP_000167219.1;Name=WP_000167219.1;gbkey=CDS;gene=bioD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455339.1;locus_tag=STY7866_RS03660;product=ATP-dependent dethiobiotin synthetase BioD;protein_id=WP_000167219.1;transl_table=11
NZ_CAAR01000108.1	RefSeq	gene	8946	9701	.	-	.	ID=gene-STY7866_RS03665;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=STY7866_RS03665
NZ_CAAR01000108.1	Protein Homology	CDS	8946	9701	.	-	0	ID=cds-WP_000079913.1;Parent=gene-STY7866_RS03665;Dbxref=Genbank:WP_000079913.1;Name=WP_000079913.1;gbkey=CDS;gene=bioC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455338.1;locus_tag=STY7866_RS03665;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000079913.1;transl_table=11
NZ_CAAR01000108.1	RefSeq	pseudogene	9685	10841	.	-	.	ID=gene-STY7866_RS03670;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=pseudogene;locus_tag=STY7866_RS03670;pseudo=true
NZ_CAAR01000108.1	Protein Homology	CDS	9685	10841	.	-	0	ID=cds-STY7866_RS03670;Parent=gene-STY7866_RS03670;Note=frameshifted;gbkey=CDS;gene=bioF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455337.1;locus_tag=STY7866_RS03670;product=8-amino-7-oxononanoate synthase;pseudo=true;transl_table=11
NZ_CAAR01000108.1	RefSeq	gene	10838	11878	.	-	.	ID=gene-STY7866_RS03675;Name=STY7866_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03675
NZ_CAAR01000108.1	Protein Homology	CDS	10838	11878	.	-	0	ID=cds-WP_000090724.1;Parent=gene-STY7866_RS03675;Dbxref=Genbank:WP_000090724.1;Name=WP_000090724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455336.1;locus_tag=STY7866_RS03675;product=biotin synthase BioB;protein_id=WP_000090724.1;transl_table=11
NZ_CAAR01000108.1	RefSeq	gene	11965	13254	.	+	.	ID=gene-STY7866_RS03680;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=STY7866_RS03680
NZ_CAAR01000108.1	Protein Homology	CDS	11965	13254	.	+	0	ID=cds-WP_000205503.1;Parent=gene-STY7866_RS03680;Dbxref=Genbank:WP_000205503.1;Name=WP_000205503.1;gbkey=CDS;gene=bioA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455335.1;locus_tag=STY7866_RS03680;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_000205503.1;transl_table=11
NZ_CAAR01000108.1	RefSeq	gene	13312	13788	.	+	.	ID=gene-STY7866_RS03685;Name=STY7866_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03685
NZ_CAAR01000108.1	Protein Homology	CDS	13312	13788	.	+	0	ID=cds-WP_000767403.1;Parent=gene-STY7866_RS03685;Dbxref=Genbank:WP_000767403.1;Name=WP_000767403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455334.1;locus_tag=STY7866_RS03685;product=kinase inhibitor;protein_id=WP_000767403.1;transl_table=11
NZ_CAAR01000108.1	RefSeq	pseudogene	13873	15392	.	-	.	ID=gene-STY7866_RS03690;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=pseudogene;locus_tag=STY7866_RS03690;pseudo=true
NZ_CAAR01000108.1	Protein Homology	CDS	13873	15392	.	-	0	ID=cds-STY7866_RS03690;Parent=gene-STY7866_RS03690;Note=frameshifted;gbkey=CDS;gene=hutH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455333.1;locus_tag=STY7866_RS03690;product=histidine ammonia-lyase;pseudo=true;transl_table=11
NZ_CAAR01000108.1	RefSeq	gene	15394	16085	.	-	.	ID=gene-STY7866_RS03695;Name=hutU;end_range=16085,.;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=STY7866_RS03695;partial=true
NZ_CAAR01000108.1	Protein Homology	CDS	15394	16085	.	-	2	ID=cds-WP_000537923.1;Parent=gene-STY7866_RS03695;Dbxref=Genbank:WP_000537923.1;Name=WP_000537923.1;end_range=16085,.;gbkey=CDS;gene=hutU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455332.1;locus_tag=STY7866_RS03695;partial=true;product=urocanate hydratase;protein_id=WP_000537923.1;transl_table=11
##sequence-region NZ_CAAR01000107.1 1 11563
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000107.1	RefSeq	region	1	11563	.	+	.	ID=NZ_CAAR01000107.1:1..11563;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000107.1	RefSeq	gene	1	401	.	+	.	ID=gene-STY7866_RS03575;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=STY7866_RS03575;partial=true;start_range=.,1
NZ_CAAR01000107.1	Protein Homology	CDS	1	401	.	+	2	ID=cds-WP_000303568.1;Parent=gene-STY7866_RS03575;Dbxref=Genbank:WP_000303568.1;Name=WP_000303568.1;gbkey=CDS;gene=nikR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458337.1;locus_tag=STY7866_RS03575;partial=true;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_000303568.1;start_range=.,1;transl_table=11
NZ_CAAR01000107.1	RefSeq	pseudogene	506	1625	.	-	.	ID=gene-STY7866_RS03580;Name=STY7866_RS03580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03580;partial=true;pseudo=true;start_range=.,506
NZ_CAAR01000107.1	Protein Homology	CDS	506	1625	.	-	0	ID=cds-STY7866_RS03580;Parent=gene-STY7866_RS03580;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=STY7866_RS03580;partial=true;product=ABC transporter permease;pseudo=true;start_range=.,506;transl_table=11
NZ_CAAR01000107.1	RefSeq	gene	1625	4366	.	-	.	ID=gene-STY7866_RS03585;Name=STY7866_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03585
NZ_CAAR01000107.1	Protein Homology	CDS	1625	4366	.	-	0	ID=cds-WP_000202935.1;Parent=gene-STY7866_RS03585;Dbxref=Genbank:WP_000202935.1;Name=WP_000202935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458336.1;locus_tag=STY7866_RS03585;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_000202935.1;transl_table=11
NZ_CAAR01000107.1	RefSeq	gene	4363	5430	.	-	.	ID=gene-STY7866_RS03590;Name=STY7866_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03590
NZ_CAAR01000107.1	Protein Homology	CDS	4363	5430	.	-	0	ID=cds-WP_000359835.1;Parent=gene-STY7866_RS03590;Dbxref=Genbank:WP_000359835.1;Name=WP_000359835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458335.1;locus_tag=STY7866_RS03590;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_000359835.1;transl_table=11
NZ_CAAR01000107.1	RefSeq	pseudogene	6208	7501	.	+	.	ID=gene-STY7866_RS03595;Name=STY7866_RS03595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03595;pseudo=true
NZ_CAAR01000107.1	Protein Homology	CDS	6208	7501	.	+	0	ID=cds-STY7866_RS03595;Parent=gene-STY7866_RS03595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458334.1;locus_tag=STY7866_RS03595;product=MFS transporter;pseudo=true;transl_table=11
NZ_CAAR01000107.1	RefSeq	gene	7517	8683	.	+	.	ID=gene-STY7866_RS03600;Name=STY7866_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03600
NZ_CAAR01000107.1	Protein Homology	CDS	7517	8683	.	+	0	ID=cds-WP_000872632.1;Parent=gene-STY7866_RS03600;Dbxref=Genbank:WP_000872632.1;Name=WP_000872632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458333.1;locus_tag=STY7866_RS03600;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_000872632.1;transl_table=11
NZ_CAAR01000107.1	RefSeq	gene	8693	9073	.	+	.	ID=gene-STY7866_RS03605;Name=STY7866_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03605
NZ_CAAR01000107.1	Protein Homology	CDS	8693	9073	.	+	0	ID=cds-WP_000658719.1;Parent=gene-STY7866_RS03605;Dbxref=Genbank:WP_000658719.1;Name=WP_000658719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458332.1;locus_tag=STY7866_RS03605;product=RidA family protein;protein_id=WP_000658719.1;transl_table=11
NZ_CAAR01000107.1	RefSeq	gene	9112	9759	.	+	.	ID=gene-STY7866_RS03610;Name=STY7866_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03610
NZ_CAAR01000107.1	Protein Homology	CDS	9112	9759	.	+	0	ID=cds-WP_000798751.1;Parent=gene-STY7866_RS03610;Dbxref=Genbank:WP_000798751.1;Name=WP_000798751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458331.1;locus_tag=STY7866_RS03610;product=DNA-binding protein;protein_id=WP_000798751.1;transl_table=11
NZ_CAAR01000107.1	RefSeq	gene	9903	11054	.	+	.	ID=gene-STY7866_RS03615;Name=STY7866_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03615
NZ_CAAR01000107.1	Protein Homology	CDS	9903	11054	.	+	0	ID=cds-WP_001685958.1;Parent=gene-STY7866_RS03615;Dbxref=Genbank:WP_001685958.1;Name=WP_001685958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001685958.1;locus_tag=STY7866_RS03615;product=MFS transporter;protein_id=WP_001685958.1;transl_table=11
##sequence-region NZ_CAAR01000106.1 1 12594
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000106.1	RefSeq	region	1	12594	.	+	.	ID=NZ_CAAR01000106.1:1..12594;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000106.1	RefSeq	gene	1	962	.	+	.	ID=gene-STY7866_RS03510;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=STY7866_RS03510;partial=true;start_range=.,1
NZ_CAAR01000106.1	Protein Homology	CDS	1	962	.	+	2	ID=cds-WP_000629518.1;Parent=gene-STY7866_RS03510;Dbxref=Genbank:WP_000629518.1;Name=WP_000629518.1;gbkey=CDS;gene=phnW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455025.1;locus_tag=STY7866_RS03510;partial=true;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_000629518.1;start_range=.,1;transl_table=11
NZ_CAAR01000106.1	RefSeq	gene	972	1781	.	+	.	ID=gene-STY7866_RS03515;Name=STY7866_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03515
NZ_CAAR01000106.1	Protein Homology	CDS	972	1781	.	+	0	ID=cds-WP_001079741.1;Parent=gene-STY7866_RS03515;Dbxref=Genbank:WP_001079741.1;Name=WP_001079741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455026.1;locus_tag=STY7866_RS03515;product=phosphonoacetaldehyde hydrolase;protein_id=WP_001079741.1;transl_table=11
NZ_CAAR01000106.1	RefSeq	gene	1878	2468	.	-	.	ID=gene-STY7866_RS03520;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=STY7866_RS03520
NZ_CAAR01000106.1	Protein Homology	CDS	1878	2468	.	-	0	ID=cds-WP_001275809.1;Parent=gene-STY7866_RS03520;Dbxref=Genbank:WP_001275809.1;Name=WP_001275809.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455027.1;locus_tag=STY7866_RS03520;product=protein deglycase YajL;protein_id=WP_001275809.1;transl_table=11
NZ_CAAR01000106.1	RefSeq	gene	2431	3342	.	-	.	ID=gene-STY7866_RS03525;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=STY7866_RS03525
NZ_CAAR01000106.1	Protein Homology	CDS	2431	3342	.	-	0	ID=cds-WP_000705822.1;Parent=gene-STY7866_RS03525;Dbxref=Genbank:WP_000705822.1;Name=WP_000705822.1;gbkey=CDS;gene=panE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455028.1;locus_tag=STY7866_RS03525;product=2-dehydropantoate 2-reductase;protein_id=WP_000705822.1;transl_table=11
NZ_CAAR01000106.1	RefSeq	gene	3450	3959	.	+	.	ID=gene-STY7866_RS03530;Name=STY7866_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03530
NZ_CAAR01000106.1	Protein Homology	CDS	3450	3959	.	+	0	ID=cds-WP_021013199.1;Parent=gene-STY7866_RS03530;Dbxref=Genbank:WP_021013199.1;Name=WP_021013199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455029.3;locus_tag=STY7866_RS03530;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_021013199.1;transl_table=11
NZ_CAAR01000106.1	RefSeq	gene	4006	5370	.	-	.	ID=gene-STY7866_RS03535;Name=STY7866_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03535
NZ_CAAR01000106.1	Protein Homology	CDS	4006	5370	.	-	0	ID=cds-WP_001000935.1;Parent=gene-STY7866_RS03535;Dbxref=Genbank:WP_001000935.1;Name=WP_001000935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455030.1;locus_tag=STY7866_RS03535;product=MFS transporter;protein_id=WP_001000935.1;transl_table=11
NZ_CAAR01000106.1	RefSeq	pseudogene	5601	5731	.	-	.	ID=gene-STY7866_RS26855;Name=STY7866_RS26855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26855;partial=true;pseudo=true;start_range=.,5601
NZ_CAAR01000106.1	Protein Homology	CDS	5601	5731	.	-	0	ID=cds-STY7866_RS26855;Parent=gene-STY7866_RS26855;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491235.1;locus_tag=STY7866_RS26855;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,5601;transl_table=11
NZ_CAAR01000106.1	RefSeq	gene	5906	6577	.	+	.	ID=gene-STY7866_RS26860;Name=STY7866_RS26860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26860
NZ_CAAR01000106.1	Protein Homology	CDS	5906	6577	.	+	0	ID=cds-WP_000693738.1;Parent=gene-STY7866_RS26860;Dbxref=Genbank:WP_000693738.1;Name=WP_000693738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672612.1;locus_tag=STY7866_RS26860;product=sel1 repeat family protein;protein_id=WP_000693738.1;transl_table=11
NZ_CAAR01000106.1	RefSeq	pseudogene	6574	7415	.	+	.	ID=gene-STY7866_RS26865;Name=STY7866_RS26865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26865;pseudo=true
NZ_CAAR01000106.1	Protein Homology	CDS	6574	7415	.	+	0	ID=cds-STY7866_RS26865;Parent=gene-STY7866_RS26865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000870959.1;locus_tag=STY7866_RS26865;product=sel1 repeat family protein;pseudo=true;transl_table=11
NZ_CAAR01000106.1	RefSeq	gene	7427	7690	.	+	.	ID=gene-STY7866_RS03545;Name=STY7866_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03545
NZ_CAAR01000106.1	Protein Homology	CDS	7427	7690	.	+	0	ID=cds-WP_000595917.1;Parent=gene-STY7866_RS03545;Dbxref=Genbank:WP_000595917.1;Name=WP_000595917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595917.1;locus_tag=STY7866_RS03545;product=SEL1-like repeat protein;protein_id=WP_000595917.1;transl_table=11
NZ_CAAR01000106.1	RefSeq	gene	7742	8896	.	+	.	ID=gene-STY7866_RS03550;Name=STY7866_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03550
NZ_CAAR01000106.1	Protein Homology	CDS	7742	8896	.	+	0	ID=cds-WP_001150187.1;Parent=gene-STY7866_RS03550;Dbxref=Genbank:WP_001150187.1;Name=WP_001150187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001150187.1;locus_tag=STY7866_RS03550;product=sel1 repeat family protein;protein_id=WP_001150187.1;transl_table=11
NZ_CAAR01000106.1	RefSeq	gene	8944	9834	.	-	.	ID=gene-STY7866_RS03555;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=STY7866_RS03555
NZ_CAAR01000106.1	Protein Homology	CDS	8944	9834	.	-	0	ID=cds-WP_000971351.1;Parent=gene-STY7866_RS03555;Dbxref=Genbank:WP_000971351.1;Name=WP_000971351.1;gbkey=CDS;gene=cyoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455036.1;locus_tag=STY7866_RS03555;product=protoheme IX farnesyltransferase;protein_id=WP_000971351.1;transl_table=11
NZ_CAAR01000106.1	RefSeq	gene	9846	10175	.	-	.	ID=gene-STY7866_RS03560;Name=STY7866_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03560
NZ_CAAR01000106.1	Protein Homology	CDS	9846	10175	.	-	0	ID=cds-WP_000019878.1;Parent=gene-STY7866_RS03560;Dbxref=Genbank:WP_000019878.1;Name=WP_000019878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455037.1;locus_tag=STY7866_RS03560;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019878.1;transl_table=11
NZ_CAAR01000106.1	RefSeq	gene	10175	10789	.	-	.	ID=gene-STY7866_RS03565;Name=STY7866_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03565
NZ_CAAR01000106.1	Protein Homology	CDS	10175	10789	.	-	0	ID=cds-WP_000179831.1;Parent=gene-STY7866_RS03565;Dbxref=Genbank:WP_000179831.1;Name=WP_000179831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455038.1;locus_tag=STY7866_RS03565;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179831.1;transl_table=11
NZ_CAAR01000106.1	RefSeq	gene	10779	12593	.	-	.	ID=gene-STY7866_RS03570;Name=STY7866_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03570
NZ_CAAR01000106.1	Protein Homology	CDS	10779	12593	.	-	0	ID=cds-WP_000275544.1;Parent=gene-STY7866_RS03570;Dbxref=Genbank:WP_000275544.1;Name=WP_000275544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006893324.1;locus_tag=STY7866_RS03570;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000275544.1;transl_table=11
##sequence-region NZ_CAAR01000105.1 1 23201
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000105.1	RefSeq	region	1	23201	.	+	.	ID=NZ_CAAR01000105.1:1..23201;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000105.1	RefSeq	gene	1	1556	.	-	.	ID=gene-STY7866_RS03375;Name=STY7866_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03375;partial=true;start_range=.,1
NZ_CAAR01000105.1	Protein Homology	CDS	1	1556	.	-	0	ID=cds-WP_001763896.1;Parent=gene-STY7866_RS03375;Dbxref=Genbank:WP_001763896.1;Name=WP_001763896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454896.1;locus_tag=STY7866_RS03375;partial=true;product=type VI secretion system tip protein VgrG;protein_id=WP_001763896.1;start_range=.,1;transl_table=11
NZ_CAAR01000105.1	RefSeq	pseudogene	2034	2470	.	-	.	ID=gene-STY7866_RS03385;Name=STY7866_RS03385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03385;pseudo=true
NZ_CAAR01000105.1	Protein Homology	CDS	2034	2470	.	-	0	ID=cds-STY7866_RS03385;Parent=gene-STY7866_RS03385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290976.1;locus_tag=STY7866_RS03385;product=DUF2778 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000105.1	RefSeq	gene	2497	2913	.	-	.	ID=gene-STY7866_RS03390;Name=STY7866_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03390
NZ_CAAR01000105.1	Protein Homology	CDS	2497	2913	.	-	0	ID=cds-WP_000759645.1;Parent=gene-STY7866_RS03390;Dbxref=Genbank:WP_000759645.1;Name=WP_000759645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454893.1;locus_tag=STY7866_RS03390;product=DUF2195 family protein;protein_id=WP_000759645.1;transl_table=11
NZ_CAAR01000105.1	RefSeq	gene	3041	3397	.	-	.	ID=gene-STY7866_RS03400;Name=STY7866_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03400
NZ_CAAR01000105.1	Protein Homology	CDS	3041	3397	.	-	0	ID=cds-WP_001532897.1;Parent=gene-STY7866_RS03400;Dbxref=Genbank:WP_001532897.1;Name=WP_001532897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001683005.1;locus_tag=STY7866_RS03400;product=hypothetical protein;protein_id=WP_001532897.1;transl_table=11
NZ_CAAR01000105.1	RefSeq	gene	3488	3958	.	-	.	ID=gene-STY7866_RS03405;Name=STY7866_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03405
NZ_CAAR01000105.1	Protein Homology	CDS	3488	3958	.	-	0	ID=cds-WP_000528845.1;Parent=gene-STY7866_RS03405;Dbxref=Genbank:WP_000528845.1;Name=WP_000528845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528842.1;locus_tag=STY7866_RS03405;product=glucosaminidase domain-containing protein;protein_id=WP_000528845.1;transl_table=11
NZ_CAAR01000105.1	RefSeq	pseudogene	4062	4534	.	-	.	ID=gene-STY7866_RS03410;Name=STY7866_RS03410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03410;pseudo=true
NZ_CAAR01000105.1	Protein Homology	CDS	4062	4534	.	-	0	ID=cds-STY7866_RS03410;Parent=gene-STY7866_RS03410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454890.1;locus_tag=STY7866_RS03410;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000105.1	RefSeq	gene	4519	4989	.	-	.	ID=gene-STY7866_RS03415;Name=STY7866_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03415
NZ_CAAR01000105.1	Protein Homology	CDS	4519	4989	.	-	0	ID=cds-WP_000528840.1;Parent=gene-STY7866_RS03415;Dbxref=Genbank:WP_000528840.1;Name=WP_000528840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454889.1;locus_tag=STY7866_RS03415;product=hypothetical protein;protein_id=WP_000528840.1;transl_table=11
NZ_CAAR01000105.1	RefSeq	gene	5032	5799	.	-	.	ID=gene-STY7866_RS03420;Name=STY7866_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03420
NZ_CAAR01000105.1	Protein Homology	CDS	5032	5799	.	-	0	ID=cds-WP_001254133.1;Parent=gene-STY7866_RS03420;Dbxref=Genbank:WP_001254133.1;Name=WP_001254133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454888.1;locus_tag=STY7866_RS03420;product=DUF2094 domain-containing protein;protein_id=WP_001254133.1;transl_table=11
NZ_CAAR01000105.1	RefSeq	pseudogene	5799	9660	.	-	.	ID=gene-STY7866_RS03425;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=pseudogene;locus_tag=STY7866_RS03425;pseudo=true
NZ_CAAR01000105.1	Protein Homology	CDS	5799	9660	.	-	0	ID=cds-STY7866_RS03425;Parent=gene-STY7866_RS03425;Note=frameshifted;gbkey=CDS;gene=tssM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=STY7866_RS03425;product=type VI secretion system membrane subunit TssM;pseudo=true;transl_table=11
NZ_CAAR01000105.1	RefSeq	gene	9897	10391	.	-	.	ID=gene-STY7866_RS03430;Name=STY7866_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03430
NZ_CAAR01000105.1	Protein Homology	CDS	9897	10391	.	-	0	ID=cds-WP_000803074.1;Parent=gene-STY7866_RS03430;Dbxref=Genbank:WP_000803074.1;Name=WP_000803074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000803074.1;locus_tag=STY7866_RS03430;product=hypothetical protein;protein_id=WP_000803074.1;transl_table=11
NZ_CAAR01000105.1	RefSeq	pseudogene	10423	11173	.	-	.	ID=gene-STY7866_RS03435;Name=STY7866_RS03435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03435;pseudo=true
NZ_CAAR01000105.1	Protein Homology	CDS	10423	11173	.	-	0	ID=cds-STY7866_RS03435;Parent=gene-STY7866_RS03435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454886.1;locus_tag=STY7866_RS03435;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000105.1	RefSeq	gene	11178	12479	.	-	.	ID=gene-STY7866_RS03440;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=STY7866_RS03440
NZ_CAAR01000105.1	Protein Homology	CDS	11178	12479	.	-	0	ID=cds-WP_000132484.1;Parent=gene-STY7866_RS03440;Dbxref=Genbank:WP_000132484.1;Name=WP_000132484.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454885.1;locus_tag=STY7866_RS03440;product=type VI secretion system protein TssL;protein_id=WP_000132484.1;transl_table=11
NZ_CAAR01000105.1	RefSeq	gene	12476	13819	.	-	.	ID=gene-STY7866_RS03445;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=STY7866_RS03445
NZ_CAAR01000105.1	Protein Homology	CDS	12476	13819	.	-	0	ID=cds-WP_000118732.1;Parent=gene-STY7866_RS03445;Dbxref=Genbank:WP_000118732.1;Name=WP_000118732.1;gbkey=CDS;gene=tssK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=STY7866_RS03445;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000118732.1;transl_table=11
NZ_CAAR01000105.1	RefSeq	gene	13823	14359	.	-	.	ID=gene-STY7866_RS03450;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=STY7866_RS03450
NZ_CAAR01000105.1	Protein Homology	CDS	13823	14359	.	-	0	ID=cds-WP_001007105.1;Parent=gene-STY7866_RS03450;Dbxref=Genbank:WP_001007105.1;Name=WP_001007105.1;gbkey=CDS;gene=tssJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454883.1;locus_tag=STY7866_RS03450;product=type VI secretion system lipoprotein TssJ;protein_id=WP_001007105.1;transl_table=11
NZ_CAAR01000105.1	RefSeq	gene	14426	14911	.	-	.	ID=gene-STY7866_RS03455;Name=STY7866_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03455
NZ_CAAR01000105.1	Protein Homology	CDS	14426	14911	.	-	0	ID=cds-WP_000312802.1;Parent=gene-STY7866_RS03455;Dbxref=Genbank:WP_000312802.1;Name=WP_000312802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454882.1;locus_tag=STY7866_RS03455;product=type VI secretion system tube protein Hcp;protein_id=WP_000312802.1;transl_table=11
NZ_CAAR01000105.1	RefSeq	gene	15148	15573	.	-	.	ID=gene-STY7866_RS03460;Name=STY7866_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03460
NZ_CAAR01000105.1	Protein Homology	CDS	15148	15573	.	-	0	ID=cds-WP_001171575.1;Parent=gene-STY7866_RS03460;Dbxref=Genbank:WP_001171575.1;Name=WP_001171575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001171576.1;locus_tag=STY7866_RS03460;product=hypothetical protein;protein_id=WP_001171575.1;transl_table=11
NZ_CAAR01000105.1	RefSeq	pseudogene	15545	15947	.	-	.	ID=gene-STY7866_RS03465;Name=STY7866_RS03465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03465;pseudo=true
NZ_CAAR01000105.1	Protein Homology	CDS	15545	15947	.	-	0	ID=cds-STY7866_RS03465;Parent=gene-STY7866_RS03465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001147173.1;locus_tag=STY7866_RS03465;product=BPSL0067 family protein;pseudo=true;transl_table=11
NZ_CAAR01000105.1	RefSeq	pseudogene	16000	17507	.	-	.	ID=gene-STY7866_RS03470;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=pseudogene;locus_tag=STY7866_RS03470;pseudo=true
NZ_CAAR01000105.1	Protein Homology	CDS	16000	17507	.	-	0	ID=cds-STY7866_RS03470;Parent=gene-STY7866_RS03470;Note=frameshifted%3B internal stop;gbkey=CDS;gene=tssC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=STY7866_RS03470;product=type VI secretion system contractile sheath large subunit;pseudo=true;transl_table=11
NZ_CAAR01000105.1	RefSeq	gene	17531	18073	.	-	.	ID=gene-STY7866_RS03475;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=STY7866_RS03475
NZ_CAAR01000105.1	Protein Homology	CDS	17531	18073	.	-	0	ID=cds-WP_000996818.1;Parent=gene-STY7866_RS03475;Dbxref=Genbank:WP_000996818.1;Name=WP_000996818.1;gbkey=CDS;gene=tssB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454879.1;locus_tag=STY7866_RS03475;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000996818.1;transl_table=11
NZ_CAAR01000105.1	RefSeq	pseudogene	18137	18426	.	-	.	ID=gene-STY7866_RS03480;Name=STY7866_RS03480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03480;pseudo=true
NZ_CAAR01000105.1	Protein Homology	CDS	18137	18426	.	-	0	ID=cds-STY7866_RS03480;Parent=gene-STY7866_RS03480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175185.1;locus_tag=STY7866_RS03480;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000105.1	RefSeq	gene	18512	21175	.	-	.	ID=gene-STY7866_RS03490;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=STY7866_RS03490
NZ_CAAR01000105.1	Protein Homology	CDS	18512	21175	.	-	0	ID=cds-WP_000449772.1;Parent=gene-STY7866_RS03490;Dbxref=Genbank:WP_000449772.1;Name=WP_000449772.1;gbkey=CDS;gene=tssH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454876.1;locus_tag=STY7866_RS03490;product=type VI secretion system ATPase TssH;protein_id=WP_000449772.1;transl_table=11
NZ_CAAR01000105.1	RefSeq	pseudogene	21543	22440	.	+	.	ID=gene-STY7866_RS03500;Name=tagK;end_range=22440,.;gbkey=Gene;gene=tagK;gene_biotype=pseudogene;locus_tag=STY7866_RS03500;partial=true;pseudo=true
NZ_CAAR01000105.1	Protein Homology	CDS	21543	22440	.	+	0	ID=cds-STY7866_RS03500;Parent=gene-STY7866_RS03500;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=22440,.;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454874.1;locus_tag=STY7866_RS03500;partial=true;product=type VI secretion system-associated protein TagK;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000104.1 1 3025
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000104.1	RefSeq	region	1	3025	.	+	.	ID=NZ_CAAR01000104.1:1..3025;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000104.1	RefSeq	gene	92	280	.	+	.	ID=gene-STY7866_RS03340;Name=STY7866_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03340
NZ_CAAR01000104.1	Protein Homology	CDS	92	280	.	+	0	ID=cds-WP_000628349.1;Parent=gene-STY7866_RS03340;Dbxref=Genbank:WP_000628349.1;Name=WP_000628349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000628349.1;locus_tag=STY7866_RS03340;product=hypothetical protein;protein_id=WP_000628349.1;transl_table=11
NZ_CAAR01000104.1	RefSeq	gene	270	566	.	+	.	ID=gene-STY7866_RS03345;Name=STY7866_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03345
NZ_CAAR01000104.1	Protein Homology	CDS	270	566	.	+	0	ID=cds-WP_010989236.1;Parent=gene-STY7866_RS03345;Dbxref=Genbank:WP_010989236.1;Name=WP_010989236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989236.1;locus_tag=STY7866_RS03345;product=hypothetical protein;protein_id=WP_010989236.1;transl_table=11
NZ_CAAR01000104.1	RefSeq	pseudogene	636	952	.	+	.	ID=gene-STY7866_RS03350;Name=STY7866_RS03350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03350;pseudo=true
NZ_CAAR01000104.1	Protein Homology	CDS	636	952	.	+	0	ID=cds-STY7866_RS03350;Parent=gene-STY7866_RS03350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001141621.1;locus_tag=STY7866_RS03350;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000104.1	RefSeq	gene	949	1215	.	+	.	ID=gene-STY7866_RS03355;Name=STY7866_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03355
NZ_CAAR01000104.1	Protein Homology	CDS	949	1215	.	+	0	ID=cds-WP_000768134.1;Parent=gene-STY7866_RS03355;Dbxref=Genbank:WP_000768134.1;Name=WP_000768134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457511.1;locus_tag=STY7866_RS03355;product=bacteriocin immunity protein;protein_id=WP_000768134.1;transl_table=11
NZ_CAAR01000104.1	RefSeq	pseudogene	1225	1443	.	+	.	ID=gene-STY7866_RS26850;Name=STY7866_RS26850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26850;partial=true;pseudo=true;start_range=.,1225
NZ_CAAR01000104.1	Protein Homology	CDS	1225	1443	.	+	0	ID=cds-STY7866_RS26850;Parent=gene-STY7866_RS26850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000093538.1;locus_tag=STY7866_RS26850;partial=true;product=type VI secretion system tube protein Hcp;pseudo=true;start_range=.,1225;transl_table=11
NZ_CAAR01000104.1	RefSeq	gene	1458	1736	.	+	.	ID=gene-STY7866_RS03360;Name=STY7866_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03360
NZ_CAAR01000104.1	Protein Homology	CDS	1458	1736	.	+	0	ID=cds-WP_000421096.1;Parent=gene-STY7866_RS03360;Dbxref=Genbank:WP_000421096.1;Name=WP_000421096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457512.1;locus_tag=STY7866_RS03360;product=bacteriocin immunity protein;protein_id=WP_000421096.1;transl_table=11
NZ_CAAR01000104.1	RefSeq	gene	2139	2642	.	+	.	ID=gene-STY7866_RS03365;Name=STY7866_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03365
NZ_CAAR01000104.1	Protein Homology	CDS	2139	2642	.	+	0	ID=cds-WP_001151809.1;Parent=gene-STY7866_RS03365;Dbxref=Genbank:WP_001151809.1;Name=WP_001151809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151807.1;locus_tag=STY7866_RS03365;product=hypothetical protein;protein_id=WP_001151809.1;transl_table=11
NZ_CAAR01000104.1	RefSeq	gene	2901	3025	.	+	.	ID=gene-STY7866_RS03370;Name=STY7866_RS03370;end_range=3025,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03370;partial=true
NZ_CAAR01000104.1	Protein Homology	CDS	2901	3025	.	+	0	ID=cds-WP_031626179.1;Parent=gene-STY7866_RS03370;Dbxref=Genbank:WP_031626179.1;Name=WP_031626179.1;end_range=3025,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001729072.1;locus_tag=STY7866_RS03370;partial=true;product=DUF3289 family protein;protein_id=WP_031626179.1;transl_table=11
##sequence-region NZ_CAAR01000103.1 1 3192
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000103.1	RefSeq	region	1	3192	.	+	.	ID=NZ_CAAR01000103.1:1..3192;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000103.1	RefSeq	pseudogene	104	737	.	-	.	ID=gene-STY7866_RS03310;Name=crp;gbkey=Gene;gene=crp;gene_biotype=pseudogene;locus_tag=STY7866_RS03310;pseudo=true
NZ_CAAR01000103.1	Protein Homology	CDS	104	737	.	-	0	ID=cds-STY7866_RS03310;Parent=gene-STY7866_RS03310;Note=frameshifted;gbkey=CDS;gene=crp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=STY7866_RS03310;product=cAMP-activated global transcriptional regulator CRP;pseudo=true;transl_table=11
NZ_CAAR01000103.1	RefSeq	gene	1045	1449	.	+	.	ID=gene-STY7866_RS03315;Name=STY7866_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03315
NZ_CAAR01000103.1	Protein Homology	CDS	1045	1449	.	+	0	ID=cds-WP_001148917.1;Parent=gene-STY7866_RS03315;Dbxref=Genbank:WP_001148917.1;Name=WP_001148917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458436.1;locus_tag=STY7866_RS03315;product=OsmC family protein;protein_id=WP_001148917.1;transl_table=11
NZ_CAAR01000103.1	RefSeq	gene	1545	2414	.	-	.	ID=gene-STY7866_RS03320;Name=STY7866_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03320
NZ_CAAR01000103.1	Protein Homology	CDS	1545	2414	.	-	0	ID=cds-WP_001274690.1;Parent=gene-STY7866_RS03320;Dbxref=Genbank:WP_001274690.1;Name=WP_001274690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458437.1;locus_tag=STY7866_RS03320;product=phosphoribulokinase;protein_id=WP_001274690.1;transl_table=11
NZ_CAAR01000103.1	RefSeq	gene	2466	2684	.	-	.	ID=gene-STY7866_RS03325;Name=STY7866_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03325
NZ_CAAR01000103.1	Protein Homology	CDS	2466	2684	.	-	0	ID=cds-WP_000586568.1;Parent=gene-STY7866_RS03325;Dbxref=Genbank:WP_000586568.1;Name=WP_000586568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458438.1;locus_tag=STY7866_RS03325;product=YheU family protein;protein_id=WP_000586568.1;transl_table=11
NZ_CAAR01000103.1	RefSeq	gene	2681	3192	.	-	.	ID=gene-STY7866_RS03330;Name=STY7866_RS03330;end_range=3192,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03330;partial=true
NZ_CAAR01000103.1	Protein Homology	CDS	2681	3192	.	-	2	ID=cds-WP_000297340.1;Parent=gene-STY7866_RS03330;Dbxref=Genbank:WP_000297340.1;Name=WP_000297340.1;end_range=3192,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=STY7866_RS03330;partial=true;product=hydrolase;protein_id=WP_000297340.1;transl_table=11
##sequence-region NZ_CAAR01000102.1 1 9279
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000102.1	RefSeq	region	1	9279	.	+	.	ID=NZ_CAAR01000102.1:1..9279;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000102.1	RefSeq	pseudogene	1	2473	.	-	.	ID=gene-STY7866_RS03270;Name=STY7866_RS03270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03270;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000102.1	Protein Homology	CDS	1	2473	.	-	0	ID=cds-STY7866_RS03270;Parent=gene-STY7866_RS03270;Note=internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=STY7866_RS03270;partial=true;product=chitinase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000102.1	RefSeq	gene	2565	4664	.	-	.	ID=gene-STY7866_RS03275;Name=STY7866_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03275
NZ_CAAR01000102.1	Protein Homology	CDS	2565	4664	.	-	0	ID=cds-WP_000235792.1;Parent=gene-STY7866_RS03275;Dbxref=Genbank:WP_000235792.1;Name=WP_000235792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454628.1;locus_tag=STY7866_RS03275;product=chitinase;protein_id=WP_000235792.1;transl_table=11
NZ_CAAR01000102.1	RefSeq	gene	5045	5488	.	+	.	ID=gene-STY7866_RS03280;Name=STY7866_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03280
NZ_CAAR01000102.1	Protein Homology	CDS	5045	5488	.	+	0	ID=cds-WP_000860681.1;Parent=gene-STY7866_RS03280;Dbxref=Genbank:WP_000860681.1;Name=WP_000860681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454627.1;locus_tag=STY7866_RS03280;product=transcriptional regulator;protein_id=WP_000860681.1;transl_table=11
NZ_CAAR01000102.1	RefSeq	gene	5505	6038	.	+	.	ID=gene-STY7866_RS03285;Name=STY7866_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03285
NZ_CAAR01000102.1	Protein Homology	CDS	5505	6038	.	+	0	ID=cds-WP_001068133.1;Parent=gene-STY7866_RS03285;Dbxref=Genbank:WP_001068133.1;Name=WP_001068133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454626.1;locus_tag=STY7866_RS03285;product=glycoside hydrolase family 108 protein;protein_id=WP_001068133.1;transl_table=11
NZ_CAAR01000102.1	RefSeq	gene	6099	6443	.	-	.	ID=gene-STY7866_RS03290;Name=STY7866_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03290
NZ_CAAR01000102.1	Protein Homology	CDS	6099	6443	.	-	0	ID=cds-WP_000026890.1;Parent=gene-STY7866_RS03290;Dbxref=Genbank:WP_000026890.1;Name=WP_000026890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454625.1;locus_tag=STY7866_RS03290;product=hypothetical protein;protein_id=WP_000026890.1;transl_table=11
NZ_CAAR01000102.1	RefSeq	gene	6570	7517	.	-	.	ID=gene-STY7866_RS03295;Name=STY7866_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03295
NZ_CAAR01000102.1	Protein Homology	CDS	6570	7517	.	-	0	ID=cds-WP_000534904.1;Parent=gene-STY7866_RS03295;Dbxref=Genbank:WP_000534904.1;Name=WP_000534904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454624.1;locus_tag=STY7866_RS03295;product=LysR family transcriptional regulator;protein_id=WP_000534904.1;transl_table=11
NZ_CAAR01000102.1	RefSeq	gene	7802	8941	.	-	.	ID=gene-STY7866_RS03300;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=STY7866_RS03300
NZ_CAAR01000102.1	Protein Homology	CDS	7802	8941	.	-	0	ID=cds-WP_001119009.1;Parent=gene-STY7866_RS03300;Dbxref=Genbank:WP_001119009.1;Name=WP_001119009.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454623.1;locus_tag=STY7866_RS03300;product=molecular chaperone DnaJ;protein_id=WP_001119009.1;transl_table=11
NZ_CAAR01000102.1	RefSeq	pseudogene	9027	9279	.	-	.	ID=gene-STY7866_RS26385;Name=dnaK;end_range=9279,.;gbkey=Gene;gene=dnaK;gene_biotype=pseudogene;locus_tag=STY7866_RS26385;partial=true;pseudo=true
NZ_CAAR01000102.1	Protein Homology	CDS	9027	9279	.	-	1	ID=cds-STY7866_RS26385;Parent=gene-STY7866_RS26385;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=9279,.;gbkey=CDS;gene=dnaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=STY7866_RS26385;partial=true;product=molecular chaperone DnaK;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000101.1 1 1719
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000101.1	RefSeq	region	1	1719	.	+	.	ID=NZ_CAAR01000101.1:1..1719;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000101.1	RefSeq	gene	1	179	.	-	.	ID=gene-STY7866_RS03260;Name=STY7866_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03260;partial=true;start_range=.,1
NZ_CAAR01000101.1	Protein Homology	CDS	1	179	.	-	0	ID=cds-WP_001763893.1;Parent=gene-STY7866_RS03260;Dbxref=Genbank:WP_001763893.1;Name=WP_001763893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456937.1;locus_tag=STY7866_RS03260;partial=true;product=omptin family outer membrane protease;protein_id=WP_001763893.1;start_range=.,1;transl_table=11
NZ_CAAR01000101.1	RefSeq	gene	447	1694	.	-	.	ID=gene-STY7866_RS03265;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=STY7866_RS03265
NZ_CAAR01000101.1	Protein Homology	CDS	447	1694	.	-	0	ID=cds-WP_000930841.1;Parent=gene-STY7866_RS03265;Dbxref=Genbank:WP_000930841.1;Name=WP_000930841.1;gbkey=CDS;gene=pgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456938.1;locus_tag=STY7866_RS03265;product=two-component system response regulator PgtA;protein_id=WP_000930841.1;transl_table=11
##sequence-region NZ_CAAR01000100.1 1 3829
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000100.1	RefSeq	region	1	3829	.	+	.	ID=NZ_CAAR01000100.1:1..3829;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000100.1	RefSeq	gene	1	1646	.	+	.	ID=gene-STY7866_RS03250;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=STY7866_RS03250;partial=true;start_range=.,1
NZ_CAAR01000100.1	Protein Homology	CDS	1	1646	.	+	2	ID=cds-WP_000452871.1;Parent=gene-STY7866_RS03250;Dbxref=Genbank:WP_000452871.1;Name=WP_000452871.1;gbkey=CDS;gene=recC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457389.1;locus_tag=STY7866_RS03250;partial=true;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_000452871.1;start_range=.,1;transl_table=11
NZ_CAAR01000100.1	RefSeq	gene	1824	3829	.	+	.	ID=gene-STY7866_RS03255;Name=STY7866_RS03255;end_range=3829,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03255;partial=true
NZ_CAAR01000100.1	Protein Homology	CDS	1824	3829	.	+	0	ID=cds-WP_001138261.1;Parent=gene-STY7866_RS03255;Dbxref=Genbank:WP_001138261.1;Name=WP_001138261.1;end_range=3829,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457388.1;locus_tag=STY7866_RS03255;partial=true;product=pitrilysin;protein_id=WP_001138261.1;transl_table=11
##sequence-region NZ_CAAR01000099.1 1 4343
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000099.1	RefSeq	region	1	4343	.	+	.	ID=NZ_CAAR01000099.1:1..4343;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000099.1	RefSeq	gene	1	1256	.	+	.	ID=gene-STY7866_RS03225;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=STY7866_RS03225;partial=true;start_range=.,1
NZ_CAAR01000099.1	Protein Homology	CDS	1	1256	.	+	2	ID=cds-WP_000330335.1;Parent=gene-STY7866_RS03225;Dbxref=Genbank:WP_000330335.1;Name=WP_000330335.1;gbkey=CDS;gene=gorA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=STY7866_RS03225;partial=true;product=glutathione-disulfide reductase;protein_id=WP_000330335.1;start_range=.,1;transl_table=11
NZ_CAAR01000099.1	RefSeq	pseudogene	1303	1633	.	-	.	ID=gene-STY7866_RS26845;Name=STY7866_RS26845;end_range=1633,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26845;partial=true;pseudo=true
NZ_CAAR01000099.1	Protein Homology	CDS	1303	1633	.	-	0	ID=cds-STY7866_RS26845;Parent=gene-STY7866_RS26845;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1633,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=STY7866_RS26845;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000099.1	RefSeq	gene	1566	2417	.	-	.	ID=gene-STY7866_RS03235;Name=STY7866_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03235
NZ_CAAR01000099.1	Protein Homology	CDS	1566	2417	.	-	0	ID=cds-WP_001682138.1;Parent=gene-STY7866_RS03235;Dbxref=Genbank:WP_001682138.1;Name=WP_001682138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015606274.1;locus_tag=STY7866_RS03235;product=SIS domain-containing protein;protein_id=WP_001682138.1;transl_table=11
NZ_CAAR01000099.1	RefSeq	gene	2596	3315	.	-	.	ID=gene-STY7866_RS03240;Name=STY7866_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03240
NZ_CAAR01000099.1	Protein Homology	CDS	2596	3315	.	-	0	ID=cds-WP_000572570.1;Parent=gene-STY7866_RS03240;Dbxref=Genbank:WP_000572570.1;Name=WP_000572570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458317.1;locus_tag=STY7866_RS03240;product=GntR family transcriptional regulator;protein_id=WP_000572570.1;transl_table=11
NZ_CAAR01000099.1	RefSeq	pseudogene	3640	4343	.	+	.	ID=gene-STY7866_RS03245;Name=treF;end_range=4343,.;gbkey=Gene;gene=treF;gene_biotype=pseudogene;locus_tag=STY7866_RS03245;partial=true;pseudo=true
NZ_CAAR01000099.1	Protein Homology	CDS	3640	4343	.	+	0	ID=cds-STY7866_RS03245;Parent=gene-STY7866_RS03245;Note=cytoplasmic%3B catalyzes the hydrolysis of trehalose to glucose%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4343,.;gbkey=CDS;gene=treF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458316.1;locus_tag=STY7866_RS03245;partial=true;product=alpha%2Calpha-trehalase TreF;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000098.1 1 8864
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000098.1	RefSeq	region	1	8864	.	+	.	ID=NZ_CAAR01000098.1:1..8864;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000098.1	RefSeq	gene	196	1965	.	+	.	ID=gene-STY7866_RS03145;Name=STY7866_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03145
NZ_CAAR01000098.1	Protein Homology	CDS	196	1965	.	+	0	ID=cds-WP_000990524.1;Parent=gene-STY7866_RS03145;Dbxref=Genbank:WP_000990524.1;Name=WP_000990524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456015.1;locus_tag=STY7866_RS03145;product=DDE-type integrase/transposase/recombinase;protein_id=WP_000990524.1;transl_table=11
NZ_CAAR01000098.1	RefSeq	gene	1976	3142	.	+	.	ID=gene-STY7866_RS03150;Name=STY7866_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03150
NZ_CAAR01000098.1	Protein Homology	CDS	1976	3142	.	+	0	ID=cds-WP_000960673.1;Parent=gene-STY7866_RS03150;Dbxref=Genbank:WP_000960673.1;Name=WP_000960673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991984.1;locus_tag=STY7866_RS03150;product=AAA family ATPase;protein_id=WP_000960673.1;transl_table=11
NZ_CAAR01000098.1	RefSeq	gene	3145	3414	.	+	.	ID=gene-STY7866_RS03155;Name=STY7866_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03155
NZ_CAAR01000098.1	Protein Homology	CDS	3145	3414	.	+	0	ID=cds-WP_000843446.1;Parent=gene-STY7866_RS03155;Dbxref=Genbank:WP_000843446.1;Name=WP_000843446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843445.1;locus_tag=STY7866_RS03155;product=hypothetical protein;protein_id=WP_000843446.1;transl_table=11
NZ_CAAR01000098.1	RefSeq	pseudogene	3442	3971	.	+	.	ID=gene-STY7866_RS03160;Name=STY7866_RS03160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03160;pseudo=true
NZ_CAAR01000098.1	Protein Homology	CDS	3442	3971	.	+	0	ID=cds-STY7866_RS03160;Parent=gene-STY7866_RS03160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456013.1;locus_tag=STY7866_RS03160;product=host-nuclease inhibitor protein Gam;pseudo=true;transl_table=11
NZ_CAAR01000098.1	RefSeq	gene	3982	4203	.	-	.	ID=gene-STY7866_RS26380;Name=STY7866_RS26380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26380
NZ_CAAR01000098.1	Protein Homology	CDS	3982	4203	.	-	0	ID=cds-WP_000878813.1;Parent=gene-STY7866_RS26380;Dbxref=Genbank:WP_000878813.1;Name=WP_000878813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000878813.1;locus_tag=STY7866_RS26380;product=hypothetical protein;protein_id=WP_000878813.1;transl_table=11
NZ_CAAR01000098.1	RefSeq	gene	4260	4532	.	+	.	ID=gene-STY7866_RS03175;Name=STY7866_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03175
NZ_CAAR01000098.1	Protein Homology	CDS	4260	4532	.	+	0	ID=cds-WP_000632575.1;Parent=gene-STY7866_RS03175;Dbxref=Genbank:WP_000632575.1;Name=WP_000632575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000632581.1;locus_tag=STY7866_RS03175;product=hypothetical protein;protein_id=WP_000632575.1;transl_table=11
NZ_CAAR01000098.1	RefSeq	gene	4542	4844	.	+	.	ID=gene-STY7866_RS03180;Name=STY7866_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03180
NZ_CAAR01000098.1	Protein Homology	CDS	4542	4844	.	+	0	ID=cds-WP_000197790.1;Parent=gene-STY7866_RS03180;Dbxref=Genbank:WP_000197790.1;Name=WP_000197790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456010.1;locus_tag=STY7866_RS03180;product=hypothetical protein;protein_id=WP_000197790.1;transl_table=11
NZ_CAAR01000098.1	RefSeq	gene	4841	5224	.	+	.	ID=gene-STY7866_RS03185;Name=STY7866_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03185
NZ_CAAR01000098.1	Protein Homology	CDS	4841	5224	.	+	0	ID=cds-WP_001315283.1;Parent=gene-STY7866_RS03185;Dbxref=Genbank:WP_001315283.1;Name=WP_001315283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001315283.1;locus_tag=STY7866_RS03185;product=hypothetical protein;protein_id=WP_001315283.1;transl_table=11
NZ_CAAR01000098.1	RefSeq	pseudogene	5217	5431	.	+	.	ID=gene-STY7866_RS03190;Name=STY7866_RS03190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03190;pseudo=true
NZ_CAAR01000098.1	Protein Homology	CDS	5217	5431	.	+	0	ID=cds-STY7866_RS03190;Parent=gene-STY7866_RS03190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000132655.1;locus_tag=STY7866_RS03190;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000098.1	RefSeq	pseudogene	5428	6112	.	+	.	ID=gene-STY7866_RS03195;Name=STY7866_RS03195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03195;pseudo=true
NZ_CAAR01000098.1	Protein Homology	CDS	5428	6112	.	+	0	ID=cds-STY7866_RS03195;Parent=gene-STY7866_RS03195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456007.1;locus_tag=STY7866_RS03195;product=DUF2786 domain-containing protein;pseudo=true;transl_table=11
NZ_CAAR01000098.1	RefSeq	gene	6109	6339	.	+	.	ID=gene-STY7866_RS03200;Name=STY7866_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03200
NZ_CAAR01000098.1	Protein Homology	CDS	6109	6339	.	+	0	ID=cds-WP_000631816.1;Parent=gene-STY7866_RS03200;Dbxref=Genbank:WP_000631816.1;Name=WP_000631816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456006.1;locus_tag=STY7866_RS03200;product=hypothetical protein;protein_id=WP_000631816.1;transl_table=11
NZ_CAAR01000098.1	RefSeq	gene	6329	6544	.	+	.	ID=gene-STY7866_RS03205;Name=STY7866_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03205
NZ_CAAR01000098.1	Protein Homology	CDS	6329	6544	.	+	0	ID=cds-WP_010989166.1;Parent=gene-STY7866_RS03205;Dbxref=Genbank:WP_010989166.1;Name=WP_010989166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989166.1;locus_tag=STY7866_RS03205;product=hypothetical protein;protein_id=WP_010989166.1;transl_table=11
NZ_CAAR01000098.1	RefSeq	gene	6534	6986	.	+	.	ID=gene-STY7866_RS03210;Name=STY7866_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03210
NZ_CAAR01000098.1	Protein Homology	CDS	6534	6986	.	+	0	ID=cds-WP_000988475.1;Parent=gene-STY7866_RS03210;Dbxref=Genbank:WP_000988475.1;Name=WP_000988475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456004.1;locus_tag=STY7866_RS03210;product=regulatory protein GemA;protein_id=WP_000988475.1;transl_table=11
NZ_CAAR01000098.1	RefSeq	gene	6958	7347	.	+	.	ID=gene-STY7866_RS03215;Name=STY7866_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03215
NZ_CAAR01000098.1	Protein Homology	CDS	6958	7347	.	+	0	ID=cds-WP_001281695.1;Parent=gene-STY7866_RS03215;Dbxref=Genbank:WP_001281695.1;Name=WP_001281695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456003.1;locus_tag=STY7866_RS03215;product=DNA-binding protein;protein_id=WP_001281695.1;transl_table=11
NZ_CAAR01000098.1	RefSeq	gene	7529	8473	.	-	.	ID=gene-STY7866_RS03220;Name=STY7866_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03220
NZ_CAAR01000098.1	Protein Homology	CDS	7529	8473	.	-	0	ID=cds-WP_000769298.1;Parent=gene-STY7866_RS03220;Dbxref=Genbank:WP_000769298.1;Name=WP_000769298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456002.1;locus_tag=STY7866_RS03220;product=DUF1471 domain-containing protein;protein_id=WP_000769298.1;transl_table=11
##sequence-region NZ_CAAR01000097.1 1 11332
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000097.1	RefSeq	region	1	11332	.	+	.	ID=NZ_CAAR01000097.1:1..11332;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000097.1	RefSeq	gene	1	568	.	-	.	ID=gene-STY7866_RS03075;Name=STY7866_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03075;partial=true;start_range=.,1
NZ_CAAR01000097.1	Protein Homology	CDS	1	568	.	-	0	ID=cds-WP_000812759.1;Parent=gene-STY7866_RS03075;Dbxref=Genbank:WP_000812759.1;Name=WP_000812759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457803.1;locus_tag=STY7866_RS03075;partial=true;product=DUF484 domain-containing protein;protein_id=WP_000812759.1;start_range=.,1;transl_table=11
NZ_CAAR01000097.1	RefSeq	gene	565	1389	.	-	.	ID=gene-STY7866_RS03080;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=STY7866_RS03080
NZ_CAAR01000097.1	Protein Homology	CDS	565	1389	.	-	0	ID=cds-WP_001160671.1;Parent=gene-STY7866_RS03080;Dbxref=Genbank:WP_001160671.1;Name=WP_001160671.1;gbkey=CDS;gene=dapF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=STY7866_RS03080;product=diaminopimelate epimerase;protein_id=WP_001160671.1;transl_table=11
NZ_CAAR01000097.1	RefSeq	gene	1426	1629	.	-	.	ID=gene-STY7866_RS03085;Name=STY7866_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03085
NZ_CAAR01000097.1	Protein Homology	CDS	1426	1629	.	-	0	ID=cds-WP_000799903.1;Parent=gene-STY7866_RS03085;Dbxref=Genbank:WP_000799903.1;Name=WP_000799903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457805.1;locus_tag=STY7866_RS03085;product=lipoprotein;protein_id=WP_000799903.1;transl_table=11
NZ_CAAR01000097.1	RefSeq	pseudogene	1815	3823	.	+	.	ID=gene-STY7866_RS03090;Name=STY7866_RS03090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03090;pseudo=true
NZ_CAAR01000097.1	Protein Homology	CDS	1815	3823	.	+	0	ID=cds-STY7866_RS03090;Parent=gene-STY7866_RS03090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457806.1;locus_tag=STY7866_RS03090;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000097.1	RefSeq	gene	3802	4191	.	+	.	ID=gene-STY7866_RS03095;Name=STY7866_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03095
NZ_CAAR01000097.1	Protein Homology	CDS	3802	4191	.	+	0	ID=cds-WP_001124435.1;Parent=gene-STY7866_RS03095;Dbxref=Genbank:WP_001124435.1;Name=WP_001124435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=STY7866_RS03095;product=DUF3021 family protein;protein_id=WP_001124435.1;transl_table=11
NZ_CAAR01000097.1	RefSeq	gene	4261	4581	.	+	.	ID=gene-STY7866_RS03100;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=STY7866_RS03100
NZ_CAAR01000097.1	Protein Homology	CDS	4261	4581	.	+	0	ID=cds-WP_000999925.1;Parent=gene-STY7866_RS03100;Dbxref=Genbank:WP_000999925.1;Name=WP_000999925.1;gbkey=CDS;gene=cyaY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=STY7866_RS03100;product=iron donor protein CyaY;protein_id=WP_000999925.1;transl_table=11
NZ_CAAR01000097.1	RefSeq	gene	4653	5015	.	-	.	ID=gene-STY7866_RS03105;Name=STY7866_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03105
NZ_CAAR01000097.1	Protein Homology	CDS	4653	5015	.	-	0	ID=cds-WP_010989248.1;Parent=gene-STY7866_RS03105;Dbxref=Genbank:WP_010989248.1;Name=WP_010989248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462828.1;locus_tag=STY7866_RS03105;product=hypothetical protein;protein_id=WP_010989248.1;transl_table=11
NZ_CAAR01000097.1	RefSeq	gene	5027	5569	.	-	.	ID=gene-STY7866_RS03110;Name=STY7866_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03110
NZ_CAAR01000097.1	Protein Homology	CDS	5027	5569	.	-	0	ID=cds-WP_001763885.1;Parent=gene-STY7866_RS03110;Dbxref=Genbank:WP_001763885.1;Name=WP_001763885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457810.1;locus_tag=STY7866_RS03110;product=hypothetical protein;protein_id=WP_001763885.1;transl_table=11
NZ_CAAR01000097.1	RefSeq	gene	5755	6108	.	-	.	ID=gene-STY7866_RS03115;Name=STY7866_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03115
NZ_CAAR01000097.1	Protein Homology	CDS	5755	6108	.	-	0	ID=cds-WP_000752582.1;Parent=gene-STY7866_RS03115;Dbxref=Genbank:WP_000752582.1;Name=WP_000752582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462826.1;locus_tag=STY7866_RS03115;product=hypothetical protein;protein_id=WP_000752582.1;transl_table=11
NZ_CAAR01000097.1	RefSeq	gene	6216	8762	.	-	.	ID=gene-STY7866_RS03120;Name=STY7866_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03120
NZ_CAAR01000097.1	Protein Homology	CDS	6216	8762	.	-	0	ID=cds-WP_000281718.1;Parent=gene-STY7866_RS03120;Dbxref=Genbank:WP_000281718.1;Name=WP_000281718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457812.1;locus_tag=STY7866_RS03120;product=class I adenylate cyclase;protein_id=WP_000281718.1;transl_table=11
NZ_CAAR01000097.1	RefSeq	gene	8712	8912	.	+	.	ID=gene-STY7866_RS26840;Name=STY7866_RS26840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26840
NZ_CAAR01000097.1	Protein Homology	CDS	8712	8912	.	+	0	ID=cds-WP_024131595.1;Parent=gene-STY7866_RS26840;Dbxref=Genbank:WP_024131595.1;Name=WP_024131595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219412.1;locus_tag=STY7866_RS26840;product=hypothetical protein;protein_id=WP_024131595.1;transl_table=11
NZ_CAAR01000097.1	RefSeq	pseudogene	9139	10081	.	+	.	ID=gene-STY7866_RS03125;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=pseudogene;locus_tag=STY7866_RS03125;pseudo=true
NZ_CAAR01000097.1	Protein Homology	CDS	9139	10081	.	+	0	ID=cds-STY7866_RS03125;Parent=gene-STY7866_RS03125;Note=frameshifted;gbkey=CDS;gene=hemC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457813.1;locus_tag=STY7866_RS03125;product=hydroxymethylbilane synthase;pseudo=true;transl_table=11
NZ_CAAR01000097.1	RefSeq	gene	10078	10818	.	+	.	ID=gene-STY7866_RS03130;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=STY7866_RS03130
NZ_CAAR01000097.1	Protein Homology	CDS	10078	10818	.	+	0	ID=cds-WP_000025500.1;Parent=gene-STY7866_RS03130;Dbxref=Genbank:WP_000025500.1;Name=WP_000025500.1;gbkey=CDS;gene=hemD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457814.1;locus_tag=STY7866_RS03130;product=uroporphyrinogen-III synthase;protein_id=WP_000025500.1;transl_table=11
NZ_CAAR01000097.1	RefSeq	pseudogene	10840	11332	.	+	.	ID=gene-STY7866_RS03135;Name=STY7866_RS03135;end_range=11332,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03135;partial=true;pseudo=true
NZ_CAAR01000097.1	Protein Homology	CDS	10840	11332	.	+	0	ID=cds-STY7866_RS03135;Parent=gene-STY7866_RS03135;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=11332,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457815.1;locus_tag=STY7866_RS03135;partial=true;product=uroporphyrinogen-III C-methyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000096.1 1 5749
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000096.1	RefSeq	region	1	5749	.	+	.	ID=NZ_CAAR01000096.1:1..5749;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000096.1	RefSeq	pseudogene	1	169	.	+	.	ID=gene-STY7866_RS26830;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=pseudogene;locus_tag=STY7866_RS26830;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000096.1	Protein Homology	CDS	1	169	.	+	2	ID=cds-STY7866_RS26830;Parent=gene-STY7866_RS26830;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456130.1;locus_tag=STY7866_RS26830;partial=true;product=SPI-2 type III secretion system translocon protein SseB;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000096.1	RefSeq	gene	166	639	.	+	.	ID=gene-STY7866_RS03030;Name=STY7866_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03030
NZ_CAAR01000096.1	Protein Homology	CDS	166	639	.	+	0	ID=cds-WP_000711030.1;Parent=gene-STY7866_RS03030;Dbxref=Genbank:WP_000711030.1;Name=WP_000711030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456129.1;locus_tag=STY7866_RS03030;product=CesD/SycD/LcrH family type III secretion system chaperone SscA;protein_id=WP_000711030.1;transl_table=11
NZ_CAAR01000096.1	RefSeq	pseudogene	642	2098	.	+	.	ID=gene-STY7866_RS03035;Name=sseC;gbkey=Gene;gene=sseC;gene_biotype=pseudogene;locus_tag=STY7866_RS03035;pseudo=true
NZ_CAAR01000096.1	Protein Homology	CDS	642	2098	.	+	0	ID=cds-STY7866_RS03035;Parent=gene-STY7866_RS03035;Note=frameshifted;gbkey=CDS;gene=sseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456128.1;locus_tag=STY7866_RS03035;product=SPI-2 type III secretion system translocon protein SseC;pseudo=true;transl_table=11
NZ_CAAR01000096.1	RefSeq	gene	2114	2701	.	+	.	ID=gene-STY7866_RS03040;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=STY7866_RS03040
NZ_CAAR01000096.1	Protein Homology	CDS	2114	2701	.	+	0	ID=cds-WP_000388328.1;Parent=gene-STY7866_RS03040;Dbxref=Genbank:WP_000388328.1;Name=WP_000388328.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456127.1;locus_tag=STY7866_RS03040;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WP_000388328.1;transl_table=11
NZ_CAAR01000096.1	RefSeq	pseudogene	2704	3119	.	+	.	ID=gene-STY7866_RS03045;Name=STY7866_RS03045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS03045;pseudo=true
NZ_CAAR01000096.1	Protein Homology	CDS	2704	3119	.	+	0	ID=cds-STY7866_RS03045;Parent=gene-STY7866_RS03045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456126.1;locus_tag=STY7866_RS03045;product=pathogenicity island 2 effector protein SseE;pseudo=true;transl_table=11
NZ_CAAR01000096.1	RefSeq	gene	3171	3605	.	+	.	ID=gene-STY7866_RS03050;Name=STY7866_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03050
NZ_CAAR01000096.1	Protein Homology	CDS	3171	3605	.	+	0	ID=cds-WP_000979964.1;Parent=gene-STY7866_RS03050;Dbxref=Genbank:WP_000979964.1;Name=WP_000979964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456125.1;locus_tag=STY7866_RS03050;product=CesD/SycD/LcrH family type III secretion system chaperone;protein_id=WP_000979964.1;transl_table=11
NZ_CAAR01000096.1	RefSeq	gene	3621	4403	.	+	.	ID=gene-STY7866_RS03055;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=STY7866_RS03055
NZ_CAAR01000096.1	Protein Homology	CDS	3621	4403	.	+	0	ID=cds-WP_000690723.1;Parent=gene-STY7866_RS03055;Dbxref=Genbank:WP_000690723.1;Name=WP_000690723.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456124.1;locus_tag=STY7866_RS03055;product=type III secretion systems effector SseF;protein_id=WP_000690723.1;transl_table=11
NZ_CAAR01000096.1	RefSeq	gene	4400	5089	.	+	.	ID=gene-STY7866_RS03060;Name=STY7866_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03060
NZ_CAAR01000096.1	Protein Homology	CDS	4400	5089	.	+	0	ID=cds-WP_000805847.1;Parent=gene-STY7866_RS03060;Dbxref=Genbank:WP_000805847.1;Name=WP_000805847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456123.1;locus_tag=STY7866_RS03060;product=pathogenicity island 2 effector protein SseG;protein_id=WP_000805847.1;transl_table=11
NZ_CAAR01000096.1	RefSeq	gene	5183	5398	.	+	.	ID=gene-STY7866_RS03065;Name=STY7866_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03065
NZ_CAAR01000096.1	Protein Homology	CDS	5183	5398	.	+	0	ID=cds-WP_000350226.1;Parent=gene-STY7866_RS03065;Dbxref=Genbank:WP_000350226.1;Name=WP_000350226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456122.1;locus_tag=STY7866_RS03065;product=type III secretion system needle protein SsaG;protein_id=WP_000350226.1;transl_table=11
NZ_CAAR01000096.1	RefSeq	gene	5376	5666	.	+	.	ID=gene-STY7866_RS03070;Name=STY7866_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03070
NZ_CAAR01000096.1	Protein Homology	CDS	5376	5666	.	+	0	ID=cds-WP_000444714.1;Parent=gene-STY7866_RS03070;Dbxref=Genbank:WP_000444714.1;Name=WP_000444714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=STY7866_RS03070;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_000444714.1;transl_table=11
NZ_CAAR01000096.1	RefSeq	pseudogene	5678	5749	.	+	.	ID=gene-STY7866_RS26835;Name=STY7866_RS26835;end_range=5749,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26835;partial=true;pseudo=true
NZ_CAAR01000096.1	Protein Homology	CDS	5678	5749	.	+	0	ID=cds-STY7866_RS26835;Parent=gene-STY7866_RS26835;Note=Salmonella pathogenicity island 2 protein%3B member of a type III secretion system involved in the survival and replication of Salmonella in a host cell%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5749,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456120.1;locus_tag=STY7866_RS26835;partial=true;product=EscI/YscI/HrpB family type III secretion system inner rod protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000095.1 1 6863
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000095.1	RefSeq	region	1	6863	.	+	.	ID=NZ_CAAR01000095.1:1..6863;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000095.1	RefSeq	gene	65	151	.	-	.	ID=gene-STY7866_RS02980;Name=STY7866_RS02980;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS02980
NZ_CAAR01000095.1	tRNAscan-SE	tRNA	65	151	.	-	.	ID=rna-STY7866_RS02980;Parent=gene-STY7866_RS02980;anticodon=(pos:complement(115..117));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS02980;product=tRNA-Leu
NZ_CAAR01000095.1	tRNAscan-SE	exon	65	151	.	-	.	ID=exon-STY7866_RS02980-1;Parent=rna-STY7866_RS02980;anticodon=(pos:complement(115..117));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS02980;product=tRNA-Leu
NZ_CAAR01000095.1	RefSeq	gene	342	1370	.	-	.	ID=gene-STY7866_RS02985;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=STY7866_RS02985
NZ_CAAR01000095.1	Protein Homology	CDS	342	1370	.	-	0	ID=cds-WP_001272292.1;Parent=gene-STY7866_RS02985;Dbxref=Genbank:WP_001272292.1;Name=WP_001272292.1;gbkey=CDS;gene=rsmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458968.1;locus_tag=STY7866_RS02985;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272292.1;transl_table=11
NZ_CAAR01000095.1	RefSeq	gene	1473	1910	.	+	.	ID=gene-STY7866_RS02990;Name=STY7866_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02990
NZ_CAAR01000095.1	Protein Homology	CDS	1473	1910	.	+	0	ID=cds-WP_000203999.1;Parent=gene-STY7866_RS02990;Dbxref=Genbank:WP_000203999.1;Name=WP_000203999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458969.1;locus_tag=STY7866_RS02990;product=DNA polymerase III subunit psi;protein_id=WP_000203999.1;transl_table=11
NZ_CAAR01000095.1	RefSeq	gene	1855	2301	.	+	.	ID=gene-STY7866_RS02995;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=STY7866_RS02995
NZ_CAAR01000095.1	Protein Homology	CDS	1855	2301	.	+	0	ID=cds-WP_001092432.1;Parent=gene-STY7866_RS02995;Dbxref=Genbank:WP_001092432.1;Name=WP_001092432.1;gbkey=CDS;gene=rimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458970.1;locus_tag=STY7866_RS02995;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092432.1;transl_table=11
NZ_CAAR01000095.1	RefSeq	gene	2320	3000	.	+	.	ID=gene-STY7866_RS03000;Name=STY7866_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03000
NZ_CAAR01000095.1	Protein Homology	CDS	2320	3000	.	+	0	ID=cds-WP_000978807.1;Parent=gene-STY7866_RS03000;Dbxref=Genbank:WP_000978807.1;Name=WP_000978807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458971.1;locus_tag=STY7866_RS03000;product=pyrimidine 5'-nucleotidase;protein_id=WP_000978807.1;transl_table=11
NZ_CAAR01000095.1	RefSeq	gene	3092	4681	.	+	.	ID=gene-STY7866_RS03005;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=STY7866_RS03005
NZ_CAAR01000095.1	Protein Homology	CDS	3092	4681	.	+	0	ID=cds-WP_000175968.1;Parent=gene-STY7866_RS03005;Dbxref=Genbank:WP_000175968.1;Name=WP_000175968.1;gbkey=CDS;gene=prfC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=STY7866_RS03005;product=peptide chain release factor 3;protein_id=WP_000175968.1;transl_table=11
NZ_CAAR01000095.1	RefSeq	pseudogene	5083	5699	.	+	.	ID=gene-STY7866_RS03010;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=pseudogene;locus_tag=STY7866_RS03010;pseudo=true
NZ_CAAR01000095.1	Protein Homology	CDS	5083	5699	.	+	0	ID=cds-STY7866_RS03010;Parent=gene-STY7866_RS03010;Note=frameshifted;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458973.1;locus_tag=STY7866_RS03010;product=molecular chaperone OsmY;pseudo=true;transl_table=11
NZ_CAAR01000095.1	RefSeq	gene	5828	5989	.	+	.	ID=gene-STY7866_RS03015;Name=STY7866_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03015
NZ_CAAR01000095.1	Protein Homology	CDS	5828	5989	.	+	0	ID=cds-WP_000490276.1;Parent=gene-STY7866_RS03015;Dbxref=Genbank:WP_000490276.1;Name=WP_000490276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=STY7866_RS03015;product=DUF1328 domain-containing protein;protein_id=WP_000490276.1;transl_table=11
NZ_CAAR01000095.1	RefSeq	gene	6113	6863	.	+	.	ID=gene-STY7866_RS03020;Name=STY7866_RS03020;end_range=6863,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS03020;partial=true
NZ_CAAR01000095.1	Protein Homology	CDS	6113	6863	.	+	0	ID=cds-WP_000531550.1;Parent=gene-STY7866_RS03020;Dbxref=Genbank:WP_000531550.1;Name=WP_000531550.1;end_range=6863,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458975.1;locus_tag=STY7866_RS03020;partial=true;product=patatin family protein;protein_id=WP_000531550.1;transl_table=11
##sequence-region NZ_CAAR01000094.1 1 1761
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000094.1	RefSeq	region	1	1761	.	+	.	ID=NZ_CAAR01000094.1:1..1761;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000094.1	RefSeq	pseudogene	1	671	.	-	.	ID=gene-STY7866_RS02970;Name=STY7866_RS02970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS02970;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000094.1	Protein Homology	CDS	1	671	.	-	0	ID=cds-STY7866_RS02970;Parent=gene-STY7866_RS02970;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454756.1;locus_tag=STY7866_RS02970;partial=true;product=type IV pilin biogenesis protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000094.1	RefSeq	gene	661	1761	.	-	.	ID=gene-STY7866_RS02975;Name=gspE;end_range=1761,.;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=STY7866_RS02975;partial=true
NZ_CAAR01000094.1	Protein Homology	CDS	661	1761	.	-	0	ID=cds-WP_000304706.1;Parent=gene-STY7866_RS02975;Dbxref=Genbank:WP_000304706.1;Name=WP_000304706.1;end_range=1761,.;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454757.1;locus_tag=STY7866_RS02975;partial=true;product=type II secretion system protein GspE;protein_id=WP_000304706.1;transl_table=11
##sequence-region NZ_CAAR01000093.1 1 7528
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000093.1	RefSeq	region	1	7528	.	+	.	ID=NZ_CAAR01000093.1:1..7528;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000093.1	RefSeq	gene	124	945	.	-	.	ID=gene-STY7866_RS02940;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=STY7866_RS02940
NZ_CAAR01000093.1	Protein Homology	CDS	124	945	.	-	0	ID=cds-WP_001191856.1;Parent=gene-STY7866_RS02940;Dbxref=Genbank:WP_001191856.1;Name=WP_001191856.1;gbkey=CDS;gene=cobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=STY7866_RS02940;product=NAD-dependent protein deacylase;protein_id=WP_001191856.1;transl_table=11
NZ_CAAR01000093.1	RefSeq	gene	963	1871	.	-	.	ID=gene-STY7866_RS02945;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=STY7866_RS02945
NZ_CAAR01000093.1	Protein Homology	CDS	963	1871	.	-	0	ID=cds-WP_000291328.1;Parent=gene-STY7866_RS02945;Dbxref=Genbank:WP_000291328.1;Name=WP_000291328.1;gbkey=CDS;gene=nagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455712.1;locus_tag=STY7866_RS02945;product=N-acetylglucosamine kinase;protein_id=WP_000291328.1;transl_table=11
NZ_CAAR01000093.1	RefSeq	gene	1900	3144	.	-	.	ID=gene-STY7866_RS02950;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=STY7866_RS02950
NZ_CAAR01000093.1	Protein Homology	CDS	1900	3144	.	-	0	ID=cds-WP_000168092.1;Parent=gene-STY7866_RS02950;Dbxref=Genbank:WP_000168092.1;Name=WP_000168092.1;gbkey=CDS;gene=lolE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455711.1;locus_tag=STY7866_RS02950;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_000168092.1;transl_table=11
NZ_CAAR01000093.1	RefSeq	gene	3144	3845	.	-	.	ID=gene-STY7866_RS02955;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=STY7866_RS02955
NZ_CAAR01000093.1	Protein Homology	CDS	3144	3845	.	-	0	ID=cds-WP_001033714.1;Parent=gene-STY7866_RS02955;Dbxref=Genbank:WP_001033714.1;Name=WP_001033714.1;gbkey=CDS;gene=lolD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455710.1;locus_tag=STY7866_RS02955;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033714.1;transl_table=11
NZ_CAAR01000093.1	RefSeq	gene	3838	5148	.	-	.	ID=gene-STY7866_RS02960;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=STY7866_RS02960
NZ_CAAR01000093.1	Protein Homology	CDS	3838	5148	.	-	0	ID=cds-WP_001272105.1;Parent=gene-STY7866_RS02960;Dbxref=Genbank:WP_001272105.1;Name=WP_001272105.1;gbkey=CDS;gene=lolC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455709.1;locus_tag=STY7866_RS02960;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_001272105.1;transl_table=11
NZ_CAAR01000093.1	RefSeq	gene	5375	7528	.	+	.	ID=gene-STY7866_RS02965;Name=STY7866_RS02965;end_range=7528,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02965;partial=true
NZ_CAAR01000093.1	Protein Homology	CDS	5375	7528	.	+	0	ID=cds-WP_001114339.1;Parent=gene-STY7866_RS02965;Dbxref=Genbank:WP_001114339.1;Name=WP_001114339.1;end_range=7528,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455708.1;locus_tag=STY7866_RS02965;partial=true;product=transcription-repair coupling factor;protein_id=WP_001114339.1;transl_table=11
##sequence-region NZ_CAAR01000092.1 1 4226
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000092.1	RefSeq	region	1	4226	.	+	.	ID=NZ_CAAR01000092.1:1..4226;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000092.1	RefSeq	pseudogene	1	337	.	-	.	ID=gene-STY7866_RS26825;Name=STY7866_RS26825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26825;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000092.1	Protein Homology	CDS	1	337	.	-	0	ID=cds-STY7866_RS26825;Parent=gene-STY7866_RS26825;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457439.1;locus_tag=STY7866_RS26825;partial=true;product=PCRF domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000092.1	RefSeq	gene	442	2175	.	-	.	ID=gene-STY7866_RS02920;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=STY7866_RS02920
NZ_CAAR01000092.1	Protein Homology	CDS	442	2175	.	-	0	ID=cds-WP_000813396.1;Parent=gene-STY7866_RS02920;Dbxref=Genbank:WP_000813396.1;Name=WP_000813396.1;gbkey=CDS;gene=recJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457440.1;locus_tag=STY7866_RS02920;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_000813396.1;transl_table=11
NZ_CAAR01000092.1	RefSeq	gene	2181	2894	.	-	.	ID=gene-STY7866_RS02925;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=STY7866_RS02925
NZ_CAAR01000092.1	Protein Homology	CDS	2181	2894	.	-	0	ID=cds-WP_000745614.1;Parent=gene-STY7866_RS02925;Dbxref=Genbank:WP_000745614.1;Name=WP_000745614.1;gbkey=CDS;gene=dsbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457441.1;locus_tag=STY7866_RS02925;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000745614.1;transl_table=11
NZ_CAAR01000092.1	RefSeq	gene	2918	3814	.	-	.	ID=gene-STY7866_RS02930;Name=STY7866_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02930
NZ_CAAR01000092.1	Protein Homology	CDS	2918	3814	.	-	0	ID=cds-WP_000434302.1;Parent=gene-STY7866_RS02930;Dbxref=Genbank:WP_000434302.1;Name=WP_000434302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457442.1;locus_tag=STY7866_RS02930;product=site-specific tyrosine recombinase XerD;protein_id=WP_000434302.1;transl_table=11
NZ_CAAR01000092.1	RefSeq	pseudogene	3927	4226	.	+	.	ID=gene-STY7866_RS02935;Name=STY7866_RS02935;end_range=4226,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS02935;partial=true;pseudo=true
NZ_CAAR01000092.1	Protein Homology	CDS	3927	4226	.	+	0	ID=cds-STY7866_RS02935;Parent=gene-STY7866_RS02935;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4226,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457443.1;locus_tag=STY7866_RS02935;partial=true;product=flavodoxin FldB;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000091.1 1 12850
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000091.1	RefSeq	region	1	12850	.	+	.	ID=NZ_CAAR01000091.1:1..12850;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000091.1	RefSeq	gene	1	1221	.	+	.	ID=gene-STY7866_RS02860;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=STY7866_RS02860;partial=true;start_range=.,1
NZ_CAAR01000091.1	Protein Homology	CDS	1	1221	.	+	0	ID=cds-WP_000608084.1;Parent=gene-STY7866_RS02860;Dbxref=Genbank:WP_000608084.1;Name=WP_000608084.1;gbkey=CDS;gene=deoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458981.1;locus_tag=STY7866_RS02860;partial=true;product=phosphopentomutase;protein_id=WP_000608084.1;start_range=.,1;transl_table=11
NZ_CAAR01000091.1	RefSeq	gene	1431	2150	.	+	.	ID=gene-STY7866_RS02865;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=STY7866_RS02865
NZ_CAAR01000091.1	Protein Homology	CDS	1431	2150	.	+	0	ID=cds-WP_000224864.1;Parent=gene-STY7866_RS02865;Dbxref=Genbank:WP_000224864.1;Name=WP_000224864.1;gbkey=CDS;gene=deoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458982.1;locus_tag=STY7866_RS02865;product=purine-nucleoside phosphorylase;protein_id=WP_000224864.1;transl_table=11
NZ_CAAR01000091.1	RefSeq	gene	2357	2842	.	+	.	ID=gene-STY7866_RS02870;Name=STY7866_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02870
NZ_CAAR01000091.1	Protein Homology	CDS	2357	2842	.	+	0	ID=cds-WP_000073958.1;Parent=gene-STY7866_RS02870;Dbxref=Genbank:WP_000073958.1;Name=WP_000073958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458983.1;locus_tag=STY7866_RS02870;product=transposase;protein_id=WP_000073958.1;transl_table=11
NZ_CAAR01000091.1	RefSeq	gene	2933	3949	.	-	.	ID=gene-STY7866_RS02875;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=STY7866_RS02875
NZ_CAAR01000091.1	Protein Homology	CDS	2933	3949	.	-	0	ID=cds-WP_000209755.1;Parent=gene-STY7866_RS02875;Dbxref=Genbank:WP_000209755.1;Name=WP_000209755.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458984.1;locus_tag=STY7866_RS02875;product=lipoate--protein ligase LplA;protein_id=WP_000209755.1;transl_table=11
NZ_CAAR01000091.1	RefSeq	gene	3983	4627	.	-	.	ID=gene-STY7866_RS02880;Name=STY7866_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02880
NZ_CAAR01000091.1	Protein Homology	CDS	3983	4627	.	-	0	ID=cds-WP_000090067.1;Parent=gene-STY7866_RS02880;Dbxref=Genbank:WP_000090067.1;Name=WP_000090067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458985.1;locus_tag=STY7866_RS02880;product=YtjB family periplasmic protein;protein_id=WP_000090067.1;transl_table=11
NZ_CAAR01000091.1	RefSeq	gene	4744	5712	.	+	.	ID=gene-STY7866_RS02885;Name=STY7866_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02885
NZ_CAAR01000091.1	Protein Homology	CDS	4744	5712	.	+	0	ID=cds-WP_001132983.1;Parent=gene-STY7866_RS02885;Dbxref=Genbank:WP_001132983.1;Name=WP_001132983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458986.1;locus_tag=STY7866_RS02885;product=phosphoserine phosphatase;protein_id=WP_001132983.1;transl_table=11
NZ_CAAR01000091.1	RefSeq	gene	5796	7178	.	+	.	ID=gene-STY7866_RS02890;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=STY7866_RS02890
NZ_CAAR01000091.1	Protein Homology	CDS	5796	7178	.	+	0	ID=cds-WP_001029720.1;Parent=gene-STY7866_RS02890;Dbxref=Genbank:WP_001029720.1;Name=WP_001029720.1;gbkey=CDS;gene=radA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=STY7866_RS02890;product=DNA repair protein RadA;protein_id=WP_001029720.1;transl_table=11
NZ_CAAR01000091.1	RefSeq	gene	7329	8561	.	+	.	ID=gene-STY7866_RS02895;Name=STY7866_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02895
NZ_CAAR01000091.1	Protein Homology	CDS	7329	8561	.	+	0	ID=cds-WP_001532645.1;Parent=gene-STY7866_RS02895;Dbxref=Genbank:WP_001532645.1;Name=WP_001532645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458988.1;locus_tag=STY7866_RS02895;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_001532645.1;transl_table=11
NZ_CAAR01000091.1	RefSeq	gene	8679	10346	.	-	.	ID=gene-STY7866_RS02900;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=STY7866_RS02900
NZ_CAAR01000091.1	Protein Homology	CDS	8679	10346	.	-	0	ID=cds-WP_000046772.1;Parent=gene-STY7866_RS02900;Dbxref=Genbank:WP_000046772.1;Name=WP_000046772.1;gbkey=CDS;gene=ettA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=STY7866_RS02900;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046772.1;transl_table=11
NZ_CAAR01000091.1	RefSeq	gene	10555	12492	.	+	.	ID=gene-STY7866_RS02905;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=STY7866_RS02905
NZ_CAAR01000091.1	Protein Homology	CDS	10555	12492	.	+	0	ID=cds-WP_000373272.1;Parent=gene-STY7866_RS02905;Dbxref=Genbank:WP_000373272.1;Name=WP_000373272.1;gbkey=CDS;gene=sltY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=STY7866_RS02905;product=murein transglycosylase;protein_id=WP_000373272.1;transl_table=11
NZ_CAAR01000091.1	RefSeq	gene	12550	12850	.	+	.	ID=gene-STY7866_RS02910;Name=trpR;end_range=12850,.;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=STY7866_RS02910;partial=true
NZ_CAAR01000091.1	Protein Homology	CDS	12550	12850	.	+	0	ID=cds-WP_000192001.1;Parent=gene-STY7866_RS02910;Dbxref=Genbank:WP_000192001.1;Name=WP_000192001.1;end_range=12850,.;gbkey=CDS;gene=trpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458991.1;locus_tag=STY7866_RS02910;partial=true;product=trp operon repressor;protein_id=WP_000192001.1;transl_table=11
##sequence-region NZ_CAAR01000090.1 1 18850
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000090.1	RefSeq	region	1	18850	.	+	.	ID=NZ_CAAR01000090.1:1..18850;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000090.1	RefSeq	gene	1	1989	.	-	.	ID=gene-STY7866_RS02770;Name=STY7866_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02770;partial=true;start_range=.,1
NZ_CAAR01000090.1	Protein Homology	CDS	1	1989	.	-	0	ID=cds-WP_024151020.1;Parent=gene-STY7866_RS02770;Dbxref=Genbank:WP_024151020.1;Name=WP_024151020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457745.1;locus_tag=STY7866_RS02770;partial=true;product=TIGR02099 family protein;protein_id=WP_024151020.1;start_range=.,1;transl_table=11
NZ_CAAR01000090.1	RefSeq	gene	2100	3569	.	-	.	ID=gene-STY7866_RS02775;Name=STY7866_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02775
NZ_CAAR01000090.1	Protein Homology	CDS	2100	3569	.	-	0	ID=cds-WP_000123188.1;Parent=gene-STY7866_RS02775;Dbxref=Genbank:WP_000123188.1;Name=WP_000123188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457746.1;locus_tag=STY7866_RS02775;product=ribonuclease G;protein_id=WP_000123188.1;transl_table=11
NZ_CAAR01000090.1	RefSeq	gene	3559	4152	.	-	.	ID=gene-STY7866_RS02780;Name=STY7866_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02780
NZ_CAAR01000090.1	Protein Homology	CDS	3559	4152	.	-	0	ID=cds-WP_000210300.1;Parent=gene-STY7866_RS02780;Dbxref=Genbank:WP_000210300.1;Name=WP_000210300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457747.1;locus_tag=STY7866_RS02780;product=septum formation inhibitor Maf;protein_id=WP_000210300.1;transl_table=11
NZ_CAAR01000090.1	RefSeq	gene	4161	4652	.	-	.	ID=gene-STY7866_RS02785;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=STY7866_RS02785
NZ_CAAR01000090.1	Protein Homology	CDS	4161	4652	.	-	0	ID=cds-WP_000226619.1;Parent=gene-STY7866_RS02785;Dbxref=Genbank:WP_000226619.1;Name=WP_000226619.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457748.1;locus_tag=STY7866_RS02785;product=rod shape-determining protein MreD;protein_id=WP_000226619.1;transl_table=11
NZ_CAAR01000090.1	RefSeq	gene	4652	5704	.	-	.	ID=gene-STY7866_RS02790;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=STY7866_RS02790
NZ_CAAR01000090.1	Protein Homology	CDS	4652	5704	.	-	0	ID=cds-WP_000802540.1;Parent=gene-STY7866_RS02790;Dbxref=Genbank:WP_000802540.1;Name=WP_000802540.1;gbkey=CDS;gene=mreC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457749.1;locus_tag=STY7866_RS02790;product=rod shape-determining protein MreC;protein_id=WP_000802540.1;transl_table=11
NZ_CAAR01000090.1	RefSeq	gene	5769	6812	.	-	.	ID=gene-STY7866_RS02795;Name=STY7866_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02795
NZ_CAAR01000090.1	Protein Homology	CDS	5769	6812	.	-	0	ID=cds-WP_000913396.1;Parent=gene-STY7866_RS02795;Dbxref=Genbank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=STY7866_RS02795;product=rod shape-determining protein;protein_id=WP_000913396.1;transl_table=11
NZ_CAAR01000090.1	RefSeq	gene	7120	9060	.	-	.	ID=gene-STY7866_RS02805;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=STY7866_RS02805
NZ_CAAR01000090.1	Protein Homology	CDS	7120	9060	.	-	0	ID=cds-WP_001241379.1;Parent=gene-STY7866_RS02805;Dbxref=Genbank:WP_001241379.1;Name=WP_001241379.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457751.1;locus_tag=STY7866_RS02805;product=RNase E specificity factor CsrD;protein_id=WP_001241379.1;transl_table=11
NZ_CAAR01000090.1	RefSeq	gene	9264	10238	.	+	.	ID=gene-STY7866_RS02810;Name=STY7866_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02810
NZ_CAAR01000090.1	Protein Homology	CDS	9264	10238	.	+	0	ID=cds-WP_001148246.1;Parent=gene-STY7866_RS02810;Dbxref=Genbank:WP_001148246.1;Name=WP_001148246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457752.1;locus_tag=STY7866_RS02810;product=oxidoreductase;protein_id=WP_001148246.1;transl_table=11
NZ_CAAR01000090.1	RefSeq	gene	10351	11355	.	+	.	ID=gene-STY7866_RS02815;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=STY7866_RS02815
NZ_CAAR01000090.1	Protein Homology	CDS	10351	11355	.	+	0	ID=cds-WP_000723876.1;Parent=gene-STY7866_RS02815;Dbxref=Genbank:WP_000723876.1;Name=WP_000723876.1;gbkey=CDS;gene=msrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457753.1;locus_tag=STY7866_RS02815;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000723876.1;transl_table=11
NZ_CAAR01000090.1	RefSeq	gene	11356	11955	.	+	.	ID=gene-STY7866_RS02820;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=STY7866_RS02820
NZ_CAAR01000090.1	Protein Homology	CDS	11356	11955	.	+	0	ID=cds-WP_001241496.1;Parent=gene-STY7866_RS02820;Dbxref=Genbank:WP_001241496.1;Name=WP_001241496.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457754.1;locus_tag=STY7866_RS02820;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001241496.1;transl_table=11
NZ_CAAR01000090.1	RefSeq	pseudogene	12023	12206	.	-	.	ID=gene-STY7866_RS26820;Name=STY7866_RS26820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26820;pseudo=true
NZ_CAAR01000090.1	Protein Homology	CDS	12023	12206	.	-	0	ID=cds-STY7866_RS26820;Parent=gene-STY7866_RS26820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012219275.1;locus_tag=STY7866_RS26820;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000090.1	RefSeq	gene	12349	12819	.	+	.	ID=gene-STY7866_RS02825;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;gene_synonym=fabE;locus_tag=STY7866_RS02825
NZ_CAAR01000090.1	Protein Homology	CDS	12349	12819	.	+	0	ID=cds-WP_000354626.1;Parent=gene-STY7866_RS02825;Dbxref=Genbank:WP_000354626.1;Name=WP_000354626.1;gbkey=CDS;gene=accB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457755.1;locus_tag=STY7866_RS02825;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354626.1;transl_table=11
NZ_CAAR01000090.1	RefSeq	gene	12830	14179	.	+	.	ID=gene-STY7866_RS02830;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=STY7866_RS02830
NZ_CAAR01000090.1	Protein Homology	CDS	12830	14179	.	+	0	ID=cds-WP_000884627.1;Parent=gene-STY7866_RS02830;Dbxref=Genbank:WP_000884627.1;Name=WP_000884627.1;gbkey=CDS;gene=accC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=STY7866_RS02830;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884627.1;transl_table=11
NZ_CAAR01000090.1	RefSeq	gene	14287	14529	.	+	.	ID=gene-STY7866_RS02835;Name=STY7866_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02835
NZ_CAAR01000090.1	Protein Homology	CDS	14287	14529	.	+	0	ID=cds-WP_000340020.1;Parent=gene-STY7866_RS02835;Dbxref=Genbank:WP_000340020.1;Name=WP_000340020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457757.1;locus_tag=STY7866_RS02835;product=YhdT family protein;protein_id=WP_000340020.1;transl_table=11
NZ_CAAR01000090.1	RefSeq	pseudogene	14519	15969	.	+	.	ID=gene-STY7866_RS02840;Name=panF;gbkey=Gene;gene=panF;gene_biotype=pseudogene;locus_tag=STY7866_RS02840;pseudo=true
NZ_CAAR01000090.1	Protein Homology	CDS	14519	15969	.	+	0	ID=cds-STY7866_RS02840;Parent=gene-STY7866_RS02840;Note=frameshifted;gbkey=CDS;gene=panF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457758.1;locus_tag=STY7866_RS02840;product=sodium/pantothenate symporter;pseudo=true;transl_table=11
NZ_CAAR01000090.1	RefSeq	gene	15981	16862	.	+	.	ID=gene-STY7866_RS02845;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=STY7866_RS02845
NZ_CAAR01000090.1	Protein Homology	CDS	15981	16862	.	+	0	ID=cds-WP_001145849.1;Parent=gene-STY7866_RS02845;Dbxref=Genbank:WP_001145849.1;Name=WP_001145849.1;gbkey=CDS;gene=prmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457759.1;locus_tag=STY7866_RS02845;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145849.1;transl_table=11
NZ_CAAR01000090.1	RefSeq	gene	17522	18487	.	+	.	ID=gene-STY7866_RS02850;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=STY7866_RS02850
NZ_CAAR01000090.1	Protein Homology	CDS	17522	18487	.	+	0	ID=cds-WP_001219664.1;Parent=gene-STY7866_RS02850;Dbxref=Genbank:WP_001219664.1;Name=WP_001219664.1;gbkey=CDS;gene=dusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=STY7866_RS02850;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219664.1;transl_table=11
NZ_CAAR01000090.1	RefSeq	gene	18513	18809	.	+	.	ID=gene-STY7866_RS02855;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=STY7866_RS02855
NZ_CAAR01000090.1	Protein Homology	CDS	18513	18809	.	+	0	ID=cds-WP_000462905.1;Parent=gene-STY7866_RS02855;Dbxref=Genbank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=STY7866_RS02855;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11
##sequence-region NZ_CAAR01000089.1 1 5635
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000089.1	RefSeq	region	1	5635	.	+	.	ID=NZ_CAAR01000089.1:1..5635;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000089.1	RefSeq	gene	49	1473	.	-	.	ID=gene-STY7866_RS02745;Name=STY7866_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02745
NZ_CAAR01000089.1	Protein Homology	CDS	49	1473	.	-	0	ID=cds-WP_001763873.1;Parent=gene-STY7866_RS02745;Dbxref=Genbank:WP_001763873.1;Name=WP_001763873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456585.1;locus_tag=STY7866_RS02745;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_001763873.1;transl_table=11
NZ_CAAR01000089.1	cmsearch	riboswitch	1524	1699	.	-	.	ID=id-NZ_CAAR01000089.1:1524..1699;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_CAAR01000089.1	RefSeq	gene	2025	2939	.	-	.	ID=gene-STY7866_RS02750;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=STY7866_RS02750
NZ_CAAR01000089.1	Protein Homology	CDS	2025	2939	.	-	0	ID=cds-WP_000622328.1;Parent=gene-STY7866_RS02750;Dbxref=Genbank:WP_000622328.1;Name=WP_000622328.1;gbkey=CDS;gene=pocR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456586.1;locus_tag=STY7866_RS02750;product=regulatory protein PocR;protein_id=WP_000622328.1;transl_table=11
NZ_CAAR01000089.1	RefSeq	gene	3156	3950	.	-	.	ID=gene-STY7866_RS02755;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=STY7866_RS02755
NZ_CAAR01000089.1	Protein Homology	CDS	3156	3950	.	-	0	ID=cds-WP_001000027.1;Parent=gene-STY7866_RS02755;Dbxref=Genbank:WP_001000027.1;Name=WP_001000027.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456587.1;locus_tag=STY7866_RS02755;product=propanediol diffusion facilitator PduF;protein_id=WP_001000027.1;transl_table=11
NZ_CAAR01000089.1	RefSeq	gene	4475	4759	.	+	.	ID=gene-STY7866_RS02760;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=STY7866_RS02760
NZ_CAAR01000089.1	Protein Homology	CDS	4475	4759	.	+	0	ID=cds-WP_001183618.1;Parent=gene-STY7866_RS02760;Dbxref=Genbank:WP_001183618.1;Name=WP_001183618.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456588.1;locus_tag=STY7866_RS02760;product=propanediol utilization microcompartment protein PduA;protein_id=WP_001183618.1;transl_table=11
NZ_CAAR01000089.1	RefSeq	gene	4756	5568	.	+	.	ID=gene-STY7866_RS02765;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=STY7866_RS02765
NZ_CAAR01000089.1	Protein Homology	CDS	4756	5568	.	+	0	ID=cds-WP_000097500.1;Parent=gene-STY7866_RS02765;Dbxref=Genbank:WP_000097500.1;Name=WP_000097500.1;gbkey=CDS;gene=pduB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001006920.1;locus_tag=STY7866_RS02765;product=propanediol utilization microcompartment protein PduB;protein_id=WP_000097500.1;transl_table=11
##sequence-region NZ_CAAR01000088.1 1 13217
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000088.1	RefSeq	region	1	13217	.	+	.	ID=NZ_CAAR01000088.1:1..13217;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000088.1	RefSeq	gene	78	1139	.	-	.	ID=gene-STY7866_RS02670;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=STY7866_RS02670
NZ_CAAR01000088.1	Protein Homology	CDS	78	1139	.	-	0	ID=cds-WP_000963150.1;Parent=gene-STY7866_RS02670;Dbxref=Genbank:WP_000963150.1;Name=WP_000963150.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457222.1;locus_tag=STY7866_RS02670;product=recombinase RecA;protein_id=WP_000963150.1;transl_table=11
NZ_CAAR01000088.1	RefSeq	gene	1224	1721	.	-	.	ID=gene-STY7866_RS02675;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=STY7866_RS02675
NZ_CAAR01000088.1	Protein Homology	CDS	1224	1721	.	-	0	ID=cds-WP_000132240.1;Parent=gene-STY7866_RS02675;Dbxref=Genbank:WP_000132240.1;Name=WP_000132240.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457223.1;locus_tag=STY7866_RS02675;product=nicotinamide-nucleotide amidase;protein_id=WP_000132240.1;transl_table=11
NZ_CAAR01000088.1	RefSeq	gene	1916	2179	.	+	.	ID=gene-STY7866_RS26815;Name=STY7866_RS26815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26815
NZ_CAAR01000088.1	Protein Homology	CDS	1916	2179	.	+	0	ID=cds-WP_001772536.1;Parent=gene-STY7866_RS26815;Dbxref=Genbank:WP_001772536.1;Name=WP_001772536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001772536.1;locus_tag=STY7866_RS26815;product=hypothetical protein;protein_id=WP_001772536.1;transl_table=11
NZ_CAAR01000088.1	RefSeq	gene	2187	3266	.	-	.	ID=gene-STY7866_RS02680;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=STY7866_RS02680
NZ_CAAR01000088.1	Protein Homology	CDS	2187	3266	.	-	0	ID=cds-WP_000476820.1;Parent=gene-STY7866_RS02680;Dbxref=Genbank:WP_000476820.1;Name=WP_000476820.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457224.1;locus_tag=STY7866_RS02680;product=lytic murein transglycosylase B;protein_id=WP_000476820.1;transl_table=11
NZ_CAAR01000088.1	RefSeq	gene	3521	4084	.	+	.	ID=gene-STY7866_RS02685;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;gene_synonym=gutA;locus_tag=STY7866_RS02685
NZ_CAAR01000088.1	Protein Homology	CDS	3521	4084	.	+	0	ID=cds-WP_000573334.1;Parent=gene-STY7866_RS02685;Dbxref=Genbank:WP_000573334.1;Name=WP_000573334.1;gbkey=CDS;gene=srlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457225.1;locus_tag=STY7866_RS02685;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573334.1;transl_table=11
NZ_CAAR01000088.1	RefSeq	gene	4081	5052	.	+	.	ID=gene-STY7866_RS02690;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=STY7866_RS02690
NZ_CAAR01000088.1	Protein Homology	CDS	4081	5052	.	+	0	ID=cds-WP_000199043.1;Parent=gene-STY7866_RS02690;Dbxref=Genbank:WP_000199043.1;Name=WP_000199043.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;gene=srlE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457226.1;locus_tag=STY7866_RS02690;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000199043.1;transl_table=11
NZ_CAAR01000088.1	RefSeq	gene	5064	5426	.	+	.	ID=gene-STY7866_RS02695;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=STY7866_RS02695
NZ_CAAR01000088.1	Protein Homology	CDS	5064	5426	.	+	0	ID=cds-WP_000111554.1;Parent=gene-STY7866_RS02695;Dbxref=Genbank:WP_000111554.1;Name=WP_000111554.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457227.1;locus_tag=STY7866_RS02695;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000111554.1;transl_table=11
NZ_CAAR01000088.1	RefSeq	gene	5438	6217	.	+	.	ID=gene-STY7866_RS02700;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=STY7866_RS02700
NZ_CAAR01000088.1	Protein Homology	CDS	5438	6217	.	+	0	ID=cds-WP_001077371.1;Parent=gene-STY7866_RS02700;Dbxref=Genbank:WP_001077371.1;Name=WP_001077371.1;gbkey=CDS;gene=srlD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457228.1;locus_tag=STY7866_RS02700;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077371.1;transl_table=11
NZ_CAAR01000088.1	RefSeq	gene	6294	6653	.	+	.	ID=gene-STY7866_RS02705;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=STY7866_RS02705
NZ_CAAR01000088.1	Protein Homology	CDS	6294	6653	.	+	0	ID=cds-WP_000255198.1;Parent=gene-STY7866_RS02705;Dbxref=Genbank:WP_000255198.1;Name=WP_000255198.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457229.1;locus_tag=STY7866_RS02705;product=transcriptional regulator GutM;protein_id=WP_000255198.1;transl_table=11
NZ_CAAR01000088.1	RefSeq	gene	6852	7625	.	+	.	ID=gene-STY7866_RS02715;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=STY7866_RS02715
NZ_CAAR01000088.1	Protein Homology	CDS	6852	7625	.	+	0	ID=cds-WP_000804536.1;Parent=gene-STY7866_RS02715;Dbxref=Genbank:WP_000804536.1;Name=WP_000804536.1;gbkey=CDS;gene=srlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457231.1;locus_tag=STY7866_RS02715;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804536.1;transl_table=11
NZ_CAAR01000088.1	RefSeq	gene	7618	8583	.	+	.	ID=gene-STY7866_RS02720;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=STY7866_RS02720
NZ_CAAR01000088.1	Protein Homology	CDS	7618	8583	.	+	0	ID=cds-WP_001278206.1;Parent=gene-STY7866_RS02720;Dbxref=Genbank:WP_001278206.1;Name=WP_001278206.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457232.1;locus_tag=STY7866_RS02720;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001278206.1;transl_table=11
NZ_CAAR01000088.1	RefSeq	gene	8580	10100	.	-	.	ID=gene-STY7866_RS02725;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=STY7866_RS02725
NZ_CAAR01000088.1	Protein Homology	CDS	8580	10100	.	-	0	ID=cds-WP_000010816.1;Parent=gene-STY7866_RS02725;Dbxref=Genbank:WP_000010816.1;Name=WP_000010816.1;gbkey=CDS;gene=norR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457233.1;locus_tag=STY7866_RS02725;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010816.1;transl_table=11
NZ_CAAR01000088.1	RefSeq	gene	10286	11725	.	+	.	ID=gene-STY7866_RS02730;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=STY7866_RS02730
NZ_CAAR01000088.1	Protein Homology	CDS	10286	11725	.	+	0	ID=cds-WP_000025997.1;Parent=gene-STY7866_RS02730;Dbxref=Genbank:WP_000025997.1;Name=WP_000025997.1;gbkey=CDS;gene=norV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457234.1;locus_tag=STY7866_RS02730;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000025997.1;transl_table=11
NZ_CAAR01000088.1	RefSeq	gene	11722	12855	.	+	.	ID=gene-STY7866_RS02735;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=STY7866_RS02735
NZ_CAAR01000088.1	Protein Homology	CDS	11722	12855	.	+	0	ID=cds-WP_000086352.1;Parent=gene-STY7866_RS02735;Dbxref=Genbank:WP_000086352.1;Name=WP_000086352.1;gbkey=CDS;gene=norW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457235.1;locus_tag=STY7866_RS02735;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_000086352.1;transl_table=11
NZ_CAAR01000088.1	RefSeq	pseudogene	12952	13217	.	-	.	ID=gene-STY7866_RS02740;Name=STY7866_RS02740;end_range=13217,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS02740;partial=true;pseudo=true
NZ_CAAR01000088.1	Protein Homology	CDS	12952	13217	.	-	2	ID=cds-STY7866_RS02740;Parent=gene-STY7866_RS02740;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=13217,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457236.1;locus_tag=STY7866_RS02740;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000087.1 1 9277
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000087.1	RefSeq	region	1	9277	.	+	.	ID=NZ_CAAR01000087.1:1..9277;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000087.1	RefSeq	gene	1	405	.	+	.	ID=gene-STY7866_RS02615;Name=STY7866_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02615;partial=true;start_range=.,1
NZ_CAAR01000087.1	Protein Homology	CDS	1	405	.	+	0	ID=cds-WP_000707973.1;Parent=gene-STY7866_RS02615;Dbxref=Genbank:WP_000707973.1;Name=WP_000707973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458540.1;locus_tag=STY7866_RS02615;partial=true;product=conjugal transfer protein TraF;protein_id=WP_000707973.1;start_range=.,1;transl_table=11
NZ_CAAR01000087.1	RefSeq	gene	493	1491	.	+	.	ID=gene-STY7866_RS02620;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=STY7866_RS02620
NZ_CAAR01000087.1	Protein Homology	CDS	493	1491	.	+	0	ID=cds-WP_001182236.1;Parent=gene-STY7866_RS02620;Dbxref=Genbank:WP_001182236.1;Name=WP_001182236.1;gbkey=CDS;gene=dusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458541.1;locus_tag=STY7866_RS02620;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001182236.1;transl_table=11
NZ_CAAR01000087.1	RefSeq	gene	1659	1901	.	+	.	ID=gene-STY7866_RS02625;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=STY7866_RS02625
NZ_CAAR01000087.1	Protein Homology	CDS	1659	1901	.	+	0	ID=cds-WP_000891414.1;Parent=gene-STY7866_RS02625;Dbxref=Genbank:WP_000891414.1;Name=WP_000891414.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458542.1;locus_tag=STY7866_RS02625;product=envelope stress response protein PspG;protein_id=WP_000891414.1;transl_table=11
NZ_CAAR01000087.1	RefSeq	gene	2076	3059	.	-	.	ID=gene-STY7866_RS02630;Name=STY7866_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02630
NZ_CAAR01000087.1	Protein Homology	CDS	2076	3059	.	-	0	ID=cds-WP_000235562.1;Parent=gene-STY7866_RS02630;Dbxref=Genbank:WP_000235562.1;Name=WP_000235562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458543.1;locus_tag=STY7866_RS02630;product=quinone oxidoreductase;protein_id=WP_000235562.1;transl_table=11
NZ_CAAR01000087.1	RefSeq	gene	3124	4539	.	+	.	ID=gene-STY7866_RS02635;Name=STY7866_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02635
NZ_CAAR01000087.1	Protein Homology	CDS	3124	4539	.	+	0	ID=cds-WP_000918353.1;Parent=gene-STY7866_RS02635;Dbxref=Genbank:WP_000918353.1;Name=WP_000918353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458544.1;locus_tag=STY7866_RS02635;product=replicative DNA helicase;protein_id=WP_000918353.1;transl_table=11
NZ_CAAR01000087.1	RefSeq	gene	4571	5650	.	+	.	ID=gene-STY7866_RS02640;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=STY7866_RS02640
NZ_CAAR01000087.1	Protein Homology	CDS	4571	5650	.	+	0	ID=cds-WP_001147297.1;Parent=gene-STY7866_RS02640;Dbxref=Genbank:WP_001147297.1;Name=WP_001147297.1;gbkey=CDS;gene=alr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458545.1;locus_tag=STY7866_RS02640;product=alanine racemase;protein_id=WP_001147297.1;transl_table=11
NZ_CAAR01000087.1	RefSeq	gene	5836	7029	.	+	.	ID=gene-STY7866_RS02645;Name=STY7866_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02645
NZ_CAAR01000087.1	Protein Homology	CDS	5836	7029	.	+	0	ID=cds-WP_000486904.1;Parent=gene-STY7866_RS02645;Dbxref=Genbank:WP_000486904.1;Name=WP_000486904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458546.1;locus_tag=STY7866_RS02645;product=aromatic amino acid transaminase;protein_id=WP_000486904.1;transl_table=11
NZ_CAAR01000087.1	RefSeq	gene	7216	7929	.	+	.	ID=gene-STY7866_RS02650;Name=STY7866_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02650
NZ_CAAR01000087.1	Protein Homology	CDS	7216	7929	.	+	0	ID=cds-WP_000724436.1;Parent=gene-STY7866_RS02650;Dbxref=Genbank:WP_000724436.1;Name=WP_000724436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458547.1;locus_tag=STY7866_RS02650;product=acid phosphatase AphA;protein_id=WP_000724436.1;transl_table=11
NZ_CAAR01000087.1	RefSeq	gene	8058	8474	.	+	.	ID=gene-STY7866_RS02655;Name=STY7866_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02655
NZ_CAAR01000087.1	Protein Homology	CDS	8058	8474	.	+	0	ID=cds-WP_000270393.1;Parent=gene-STY7866_RS02655;Dbxref=Genbank:WP_000270393.1;Name=WP_000270393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458548.1;locus_tag=STY7866_RS02655;product=YjbQ family protein;protein_id=WP_000270393.1;transl_table=11
NZ_CAAR01000087.1	RefSeq	gene	8477	8833	.	+	.	ID=gene-STY7866_RS02660;Name=STY7866_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02660
NZ_CAAR01000087.1	Protein Homology	CDS	8477	8833	.	+	0	ID=cds-WP_000155664.1;Parent=gene-STY7866_RS02660;Dbxref=Genbank:WP_000155664.1;Name=WP_000155664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458549.1;locus_tag=STY7866_RS02660;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155664.1;transl_table=11
NZ_CAAR01000087.1	RefSeq	gene	8834	9172	.	-	.	ID=gene-STY7866_RS02665;Name=STY7866_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02665
NZ_CAAR01000087.1	Protein Homology	CDS	8834	9172	.	-	0	ID=cds-WP_000146604.1;Parent=gene-STY7866_RS02665;Dbxref=Genbank:WP_000146604.1;Name=WP_000146604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458550.1;locus_tag=STY7866_RS02665;product=hypothetical protein;protein_id=WP_000146604.1;transl_table=11
##sequence-region NZ_CAAR01000086.1 1 1894
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000086.1	RefSeq	region	1	1894	.	+	.	ID=NZ_CAAR01000086.1:1..1894;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000086.1	RefSeq	gene	1	1541	.	-	.	ID=gene-STY7866_RS02605;Name=STY7866_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02605;partial=true;start_range=.,1
NZ_CAAR01000086.1	Protein Homology	CDS	1	1541	.	-	0	ID=cds-WP_001235493.1;Parent=gene-STY7866_RS02605;Dbxref=Genbank:WP_001235493.1;Name=WP_001235493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455820.1;locus_tag=STY7866_RS02605;partial=true;product=transcriptional regulator TyrR;protein_id=WP_001235493.1;start_range=.,1;transl_table=11
NZ_CAAR01000086.1	RefSeq	gene	1689	1894	.	-	.	ID=gene-STY7866_RS02610;Name=STY7866_RS02610;end_range=1894,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02610;partial=true
NZ_CAAR01000086.1	Protein Homology	CDS	1689	1894	.	-	2	ID=cds-WP_000630696.1;Parent=gene-STY7866_RS02610;Dbxref=Genbank:WP_000630696.1;Name=WP_000630696.1;end_range=1894,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455819.1;locus_tag=STY7866_RS02610;partial=true;product=DUF697 domain-containing protein;protein_id=WP_000630696.1;transl_table=11
##sequence-region NZ_CAAR01000085.1 1 2151
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000085.1	RefSeq	region	1	2151	.	+	.	ID=NZ_CAAR01000085.1:1..2151;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000085.1	RefSeq	gene	98	778	.	-	.	ID=gene-STY7866_RS02585;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=STY7866_RS02585
NZ_CAAR01000085.1	Protein Homology	CDS	98	778	.	-	0	ID=cds-WP_000938184.1;Parent=gene-STY7866_RS02585;Dbxref=Genbank:WP_000938184.1;Name=WP_000938184.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455585.1;locus_tag=STY7866_RS02585;product=type III secretion system effector protease PipA;protein_id=WP_000938184.1;transl_table=11
NZ_CAAR01000085.1	RefSeq	gene	1001	1876	.	-	.	ID=gene-STY7866_RS02595;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=STY7866_RS02595
NZ_CAAR01000085.1	Protein Homology	CDS	1001	1876	.	-	0	ID=cds-WP_001123042.1;Parent=gene-STY7866_RS02595;Dbxref=Genbank:WP_001123042.1;Name=WP_001123042.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455586.1;locus_tag=STY7866_RS02595;product=SPI-2 type III secretion system effector PipB;protein_id=WP_001123042.1;transl_table=11
##sequence-region NZ_CAAR01000084.1 1 1301
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000084.1	RefSeq	region	1	1301	.	+	.	ID=NZ_CAAR01000084.1:1..1301;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000084.1	RefSeq	gene	25	1301	.	+	.	ID=gene-STY7866_RS02580;Name=proY;end_range=1301,.;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=STY7866_RS02580;partial=true
NZ_CAAR01000084.1	Protein Homology	CDS	25	1301	.	+	0	ID=cds-WP_024151019.1;Parent=gene-STY7866_RS02580;Dbxref=Genbank:WP_024151019.1;Name=WP_024151019.1;end_range=1301,.;gbkey=CDS;gene=proY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454995.1;locus_tag=STY7866_RS02580;partial=true;product=proline-specific permease ProY;protein_id=WP_024151019.1;transl_table=11
##sequence-region NZ_CAAR01000083.1 1 2422
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000083.1	RefSeq	region	1	2422	.	+	.	ID=NZ_CAAR01000083.1:1..2422;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000083.1	RefSeq	gene	5	1258	.	-	.	ID=gene-STY7866_RS02570;Name=STY7866_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02570
NZ_CAAR01000083.1	Protein Homology	CDS	5	1258	.	-	0	ID=cds-WP_000091796.1;Parent=gene-STY7866_RS02570;Dbxref=Genbank:WP_000091796.1;Name=WP_000091796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455993.1;locus_tag=STY7866_RS02570;product=MFS transporter;protein_id=WP_000091796.1;transl_table=11
NZ_CAAR01000083.1	RefSeq	gene	1378	2277	.	+	.	ID=gene-STY7866_RS02575;Name=STY7866_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02575
NZ_CAAR01000083.1	Protein Homology	CDS	1378	2277	.	+	0	ID=cds-WP_001019571.1;Parent=gene-STY7866_RS02575;Dbxref=Genbank:WP_001019571.1;Name=WP_001019571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455992.1;locus_tag=STY7866_RS02575;product=LysR family transcriptional regulator;protein_id=WP_001019571.1;transl_table=11
##sequence-region NZ_CAAR01000082.1 1 10149
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000082.1	RefSeq	region	1	10149	.	+	.	ID=NZ_CAAR01000082.1:1..10149;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000082.1	RefSeq	gene	1	491	.	+	.	ID=gene-STY7866_RS02520;Name=STY7866_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02520;partial=true;start_range=.,1
NZ_CAAR01000082.1	Protein Homology	CDS	1	491	.	+	2	ID=cds-WP_000324866.1;Parent=gene-STY7866_RS02520;Dbxref=Genbank:WP_000324866.1;Name=WP_000324866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455862.1;locus_tag=STY7866_RS02520;partial=true;product=FMN-dependent NADH-azoreductase;protein_id=WP_000324866.1;start_range=.,1;transl_table=11
NZ_CAAR01000082.1	RefSeq	gene	488	937	.	-	.	ID=gene-STY7866_RS02525;Name=STY7866_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02525
NZ_CAAR01000082.1	Protein Homology	CDS	488	937	.	-	0	ID=cds-WP_001518898.1;Parent=gene-STY7866_RS02525;Dbxref=Genbank:WP_001518898.1;Name=WP_001518898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455861.1;locus_tag=STY7866_RS02525;product=GFA family protein;protein_id=WP_001518898.1;transl_table=11
NZ_CAAR01000082.1	RefSeq	gene	1080	1403	.	-	.	ID=gene-STY7866_RS02530;Name=STY7866_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02530
NZ_CAAR01000082.1	Protein Homology	CDS	1080	1403	.	-	0	ID=cds-WP_000760346.1;Parent=gene-STY7866_RS02530;Dbxref=Genbank:WP_000760346.1;Name=WP_000760346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455860.1;locus_tag=STY7866_RS02530;product=YdbL family protein;protein_id=WP_000760346.1;transl_table=11
NZ_CAAR01000082.1	RefSeq	gene	1411	1602	.	-	.	ID=gene-STY7866_RS02535;Name=STY7866_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02535
NZ_CAAR01000082.1	Protein Homology	CDS	1411	1602	.	-	0	ID=cds-WP_000784063.1;Parent=gene-STY7866_RS02535;Dbxref=Genbank:WP_000784063.1;Name=WP_000784063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455859.1;locus_tag=STY7866_RS02535;product=YnbE family lipoprotein;protein_id=WP_000784063.1;transl_table=11
NZ_CAAR01000082.1	RefSeq	gene	1602	4238	.	-	.	ID=gene-STY7866_RS02540;Name=STY7866_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02540
NZ_CAAR01000082.1	Protein Homology	CDS	1602	4238	.	-	0	ID=cds-WP_000677027.1;Parent=gene-STY7866_RS02540;Dbxref=Genbank:WP_000677027.1;Name=WP_000677027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455858.1;locus_tag=STY7866_RS02540;product=YdbH family protein;protein_id=WP_000677027.1;transl_table=11
NZ_CAAR01000082.1	RefSeq	gene	4505	5494	.	+	.	ID=gene-STY7866_RS02545;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=STY7866_RS02545
NZ_CAAR01000082.1	Protein Homology	CDS	4505	5494	.	+	0	ID=cds-WP_000762205.1;Parent=gene-STY7866_RS02545;Dbxref=Genbank:WP_000762205.1;Name=WP_000762205.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455857.1;locus_tag=STY7866_RS02545;product=D-lactate dehydrogenase;protein_id=WP_000762205.1;transl_table=11
NZ_CAAR01000082.1	RefSeq	gene	5605	6015	.	+	.	ID=gene-STY7866_RS02550;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=STY7866_RS02550
NZ_CAAR01000082.1	Protein Homology	CDS	5605	6015	.	+	0	ID=cds-WP_000725239.1;Parent=gene-STY7866_RS02550;Dbxref=Genbank:WP_000725239.1;Name=WP_000725239.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455856.1;locus_tag=STY7866_RS02550;product=heat shock protein HslJ;protein_id=WP_000725239.1;transl_table=11
NZ_CAAR01000082.1	RefSeq	gene	6059	6325	.	-	.	ID=gene-STY7866_RS02555;Name=STY7866_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02555
NZ_CAAR01000082.1	Protein Homology	CDS	6059	6325	.	-	0	ID=cds-WP_001200680.1;Parent=gene-STY7866_RS02555;Dbxref=Genbank:WP_001200680.1;Name=WP_001200680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455855.4;locus_tag=STY7866_RS02555;product=DUF333 domain-containing protein;protein_id=WP_001200680.1;transl_table=11
NZ_CAAR01000082.1	RefSeq	gene	6229	6540	.	+	.	ID=gene-STY7866_RS02560;Name=STY7866_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02560
NZ_CAAR01000082.1	Protein Homology	CDS	6229	6540	.	+	0	ID=cds-WP_031603716.1;Parent=gene-STY7866_RS02560;Dbxref=Genbank:WP_031603716.1;Name=WP_031603716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=STY7866_RS02560;product=hypothetical protein;protein_id=WP_031603716.1;transl_table=11
NZ_CAAR01000082.1	RefSeq	pseudogene	6601	10127	.	+	.	ID=gene-STY7866_RS02565;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=pseudogene;locus_tag=STY7866_RS02565;pseudo=true
NZ_CAAR01000082.1	Protein Homology	CDS	6601	10127	.	+	0	ID=cds-STY7866_RS02565;Parent=gene-STY7866_RS02565;Note=frameshifted;gbkey=CDS;gene=nifJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455854.1;locus_tag=STY7866_RS02565;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000081.1 1 250
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000081.1	RefSeq	region	1	250	.	+	.	ID=NZ_CAAR01000081.1:1..250;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000081.1	RefSeq	pseudogene	1	160	.	-	.	ID=gene-STY7866_RS26810;Name=STY7866_RS26810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26810;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000081.1	Protein Homology	CDS	1	160	.	-	0	ID=cds-STY7866_RS26810;Parent=gene-STY7866_RS26810;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457404.1;locus_tag=STY7866_RS26810;partial=true;product=2-acylglycerophosphoethanolamine acyltransferase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000080.1 1 24970
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000080.1	RefSeq	region	1	24970	.	+	.	ID=NZ_CAAR01000080.1:1..24970;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000080.1	RefSeq	gene	16	1596	.	-	.	ID=gene-STY7866_RS02410;Name=STY7866_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02410
NZ_CAAR01000080.1	Protein Homology	CDS	16	1596	.	-	0	ID=cds-WP_001089326.1;Parent=gene-STY7866_RS02410;Dbxref=Genbank:WP_001089326.1;Name=WP_001089326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455370.1;locus_tag=STY7866_RS02410;product=phosphoethanolamine transferase;protein_id=WP_001089326.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	1861	1989	.	-	.	ID=gene-STY7866_RS26805;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=STY7866_RS26805
NZ_CAAR01000080.1	Protein Homology	CDS	1861	1989	.	-	0	ID=cds-WP_001001755.1;Parent=gene-STY7866_RS26805;Dbxref=Genbank:WP_001001755.1;Name=WP_001001755.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009029995.1;locus_tag=STY7866_RS26805;product=manganase accumulation protein MntS;protein_id=WP_001001755.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	2175	2648	.	+	.	ID=gene-STY7866_RS02420;Name=STY7866_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02420
NZ_CAAR01000080.1	Protein Homology	CDS	2175	2648	.	+	0	ID=cds-WP_000533542.1;Parent=gene-STY7866_RS02420;Dbxref=Genbank:WP_000533542.1;Name=WP_000533542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455371.1;locus_tag=STY7866_RS02420;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000533542.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	2645	3757	.	+	.	ID=gene-STY7866_RS02425;Name=STY7866_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02425
NZ_CAAR01000080.1	Protein Homology	CDS	2645	3757	.	+	0	ID=cds-WP_001046515.1;Parent=gene-STY7866_RS02425;Dbxref=Genbank:WP_001046515.1;Name=WP_001046515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455372.1;locus_tag=STY7866_RS02425;product=anion transporter;protein_id=WP_001046515.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	3801	4721	.	-	.	ID=gene-STY7866_RS02430;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=STY7866_RS02430
NZ_CAAR01000080.1	Protein Homology	CDS	3801	4721	.	-	0	ID=cds-WP_001056402.1;Parent=gene-STY7866_RS02430;Dbxref=Genbank:WP_001056402.1;Name=WP_001056402.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455373.1;locus_tag=STY7866_RS02430;product=L%2CD-transpeptidase;protein_id=WP_001056402.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	4941	6536	.	+	.	ID=gene-STY7866_RS02435;Name=STY7866_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02435
NZ_CAAR01000080.1	Protein Homology	CDS	4941	6536	.	+	0	ID=cds-WP_000961480.1;Parent=gene-STY7866_RS02435;Dbxref=Genbank:WP_000961480.1;Name=WP_000961480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455374.1;locus_tag=STY7866_RS02435;product=ABC-F family ATPase;protein_id=WP_000961480.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	6658	7923	.	-	.	ID=gene-STY7866_RS02440;Name=STY7866_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02440
NZ_CAAR01000080.1	Protein Homology	CDS	6658	7923	.	-	0	ID=cds-WP_000210972.1;Parent=gene-STY7866_RS02440;Dbxref=Genbank:WP_000210972.1;Name=WP_000210972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455375.1;locus_tag=STY7866_RS02440;product=DUF1479 domain-containing protein;protein_id=WP_000210972.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	8185	8994	.	+	.	ID=gene-STY7866_RS02445;Name=STY7866_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02445
NZ_CAAR01000080.1	Protein Homology	CDS	8185	8994	.	+	0	ID=cds-WP_000217910.1;Parent=gene-STY7866_RS02445;Dbxref=Genbank:WP_000217910.1;Name=WP_000217910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455376.1;locus_tag=STY7866_RS02445;product=HAD family hydrolase;protein_id=WP_000217910.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	9072	11504	.	-	.	ID=gene-STY7866_RS02450;Name=STY7866_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02450
NZ_CAAR01000080.1	Protein Homology	CDS	9072	11504	.	-	0	ID=cds-WP_000192654.1;Parent=gene-STY7866_RS02450;Dbxref=Genbank:WP_000192654.1;Name=WP_000192654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455377.1;locus_tag=STY7866_RS02450;product=glycyl radical protein;protein_id=WP_000192654.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	11510	12409	.	-	.	ID=gene-STY7866_RS02455;Name=STY7866_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02455
NZ_CAAR01000080.1	Protein Homology	CDS	11510	12409	.	-	0	ID=cds-WP_000576948.1;Parent=gene-STY7866_RS02455;Dbxref=Genbank:WP_000576948.1;Name=WP_000576948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455378.1;locus_tag=STY7866_RS02455;product=glycyl-radical enzyme activating protein;protein_id=WP_000576948.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	12687	13436	.	-	.	ID=gene-STY7866_RS02460;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=STY7866_RS02460
NZ_CAAR01000080.1	Protein Homology	CDS	12687	13436	.	-	0	ID=cds-WP_000829275.1;Parent=gene-STY7866_RS02460;Dbxref=Genbank:WP_000829275.1;Name=WP_000829275.1;gbkey=CDS;gene=moeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455379.1;locus_tag=STY7866_RS02460;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829275.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	13436	14677	.	-	.	ID=gene-STY7866_RS02465;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=STY7866_RS02465
NZ_CAAR01000080.1	Protein Homology	CDS	13436	14677	.	-	0	ID=cds-WP_000480663.1;Parent=gene-STY7866_RS02465;Dbxref=Genbank:WP_000480663.1;Name=WP_000480663.1;gbkey=CDS;gene=moeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455380.1;locus_tag=STY7866_RS02465;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000480663.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	14875	15816	.	+	.	ID=gene-STY7866_RS02470;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=STY7866_RS02470
NZ_CAAR01000080.1	Protein Homology	CDS	14875	15816	.	+	0	ID=cds-WP_001030503.1;Parent=gene-STY7866_RS02470;Dbxref=Genbank:WP_001030503.1;Name=WP_001030503.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455381.1;locus_tag=STY7866_RS02470;product=beta-aspartyl-peptidase;protein_id=WP_001030503.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	15827	17698	.	+	.	ID=gene-STY7866_RS02475;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=STY7866_RS02475
NZ_CAAR01000080.1	Protein Homology	CDS	15827	17698	.	+	0	ID=cds-WP_001120605.1;Parent=gene-STY7866_RS02475;Dbxref=Genbank:WP_001120605.1;Name=WP_001120605.1;gbkey=CDS;gene=gsiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455382.1;locus_tag=STY7866_RS02475;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001120605.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	17731	19269	.	+	.	ID=gene-STY7866_RS02480;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=STY7866_RS02480
NZ_CAAR01000080.1	Protein Homology	CDS	17731	19269	.	+	0	ID=cds-WP_000191432.1;Parent=gene-STY7866_RS02480;Dbxref=Genbank:WP_000191432.1;Name=WP_000191432.1;gbkey=CDS;gene=gsiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455383.1;locus_tag=STY7866_RS02480;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000191432.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	19330	20250	.	+	.	ID=gene-STY7866_RS02485;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=STY7866_RS02485
NZ_CAAR01000080.1	Protein Homology	CDS	19330	20250	.	+	0	ID=cds-WP_000936066.1;Parent=gene-STY7866_RS02485;Dbxref=Genbank:WP_000936066.1;Name=WP_000936066.1;gbkey=CDS;gene=gsiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455384.1;locus_tag=STY7866_RS02485;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936066.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	20253	21164	.	+	.	ID=gene-STY7866_RS02490;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=STY7866_RS02490
NZ_CAAR01000080.1	Protein Homology	CDS	20253	21164	.	+	0	ID=cds-WP_001236024.1;Parent=gene-STY7866_RS02490;Dbxref=Genbank:WP_001236024.1;Name=WP_001236024.1;gbkey=CDS;gene=gsiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455385.1;locus_tag=STY7866_RS02490;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236024.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	21255	22580	.	-	.	ID=gene-STY7866_RS02495;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=STY7866_RS02495
NZ_CAAR01000080.1	Protein Homology	CDS	21255	22580	.	-	0	ID=cds-WP_000073304.1;Parent=gene-STY7866_RS02495;Dbxref=Genbank:WP_000073304.1;Name=WP_000073304.1;gbkey=CDS;gene=rimO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455386.1;locus_tag=STY7866_RS02495;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000073304.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	22810	23193	.	+	.	ID=gene-STY7866_RS02500;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=STY7866_RS02500
NZ_CAAR01000080.1	Protein Homology	CDS	22810	23193	.	+	0	ID=cds-WP_000259651.1;Parent=gene-STY7866_RS02500;Dbxref=Genbank:WP_000259651.1;Name=WP_000259651.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455387.1;locus_tag=STY7866_RS02500;product=biofilm formation regulator BssR;protein_id=WP_000259651.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	23312	24433	.	+	.	ID=gene-STY7866_RS02505;Name=STY7866_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02505
NZ_CAAR01000080.1	Protein Homology	CDS	23312	24433	.	+	0	ID=cds-WP_001252735.1;Parent=gene-STY7866_RS02505;Dbxref=Genbank:WP_001252735.1;Name=WP_001252735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455388.1;locus_tag=STY7866_RS02505;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_001252735.1;transl_table=11
NZ_CAAR01000080.1	RefSeq	gene	24430	24970	.	-	.	ID=gene-STY7866_RS02510;Name=STY7866_RS02510;end_range=24970,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02510;partial=true
NZ_CAAR01000080.1	Protein Homology	CDS	24430	24970	.	-	1	ID=cds-WP_000541181.1;Parent=gene-STY7866_RS02510;Dbxref=Genbank:WP_000541181.1;Name=WP_000541181.1;end_range=24970,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455389.1;locus_tag=STY7866_RS02510;partial=true;product=glutathione S-transferase;protein_id=WP_000541181.1;transl_table=11
##sequence-region NZ_CAAR01000079.1 1 6468
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000079.1	RefSeq	region	1	6468	.	+	.	ID=NZ_CAAR01000079.1:1..6468;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000079.1	RefSeq	gene	13	84	.	-	.	ID=gene-STY7866_RS26800;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=STY7866_RS26800
NZ_CAAR01000079.1	Protein Homology	CDS	13	84	.	-	0	ID=cds-WP_010723117.1;Parent=gene-STY7866_RS26800;Dbxref=Genbank:WP_010723117.1;Name=WP_010723117.1;gbkey=CDS;gene=ypdK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=STY7866_RS26800;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11
NZ_CAAR01000079.1	RefSeq	gene	487	1407	.	-	.	ID=gene-STY7866_RS02380;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=STY7866_RS02380
NZ_CAAR01000079.1	Protein Homology	CDS	487	1407	.	-	0	ID=cds-WP_000484431.1;Parent=gene-STY7866_RS02380;Dbxref=Genbank:WP_000484431.1;Name=WP_000484431.1;gbkey=CDS;gene=lpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456943.1;locus_tag=STY7866_RS02380;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484431.1;transl_table=11
NZ_CAAR01000079.1	RefSeq	gene	1928	2170	.	+	.	ID=gene-STY7866_RS02390;Name=STY7866_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02390
NZ_CAAR01000079.1	Protein Homology	CDS	1928	2170	.	+	0	ID=cds-WP_000639889.1;Parent=gene-STY7866_RS02390;Dbxref=Genbank:WP_000639889.1;Name=WP_000639889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456942.1;locus_tag=STY7866_RS02390;product=YfdY family protein;protein_id=WP_000639889.1;transl_table=11
NZ_CAAR01000079.1	RefSeq	gene	2409	3800	.	-	.	ID=gene-STY7866_RS02395;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=STY7866_RS02395
NZ_CAAR01000079.1	Protein Homology	CDS	2409	3800	.	-	0	ID=cds-WP_000955756.1;Parent=gene-STY7866_RS02395;Dbxref=Genbank:WP_000955756.1;Name=WP_000955756.1;gbkey=CDS;gene=pgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456941.1;locus_tag=STY7866_RS02395;product=phosphoglycerate transporter PgtP;protein_id=WP_000955756.1;transl_table=11
NZ_CAAR01000079.1	RefSeq	gene	4236	5429	.	+	.	ID=gene-STY7866_RS02400;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=STY7866_RS02400
NZ_CAAR01000079.1	Protein Homology	CDS	4236	5429	.	+	0	ID=cds-WP_000467983.1;Parent=gene-STY7866_RS02400;Dbxref=Genbank:WP_000467983.1;Name=WP_000467983.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456940.1;locus_tag=STY7866_RS02400;product=phosphoglycerate transport regulator PgtC;protein_id=WP_000467983.1;transl_table=11
NZ_CAAR01000079.1	RefSeq	pseudogene	5426	6468	.	+	.	ID=gene-STY7866_RS02405;Name=pgtB;end_range=6468,.;gbkey=Gene;gene=pgtB;gene_biotype=pseudogene;locus_tag=STY7866_RS02405;partial=true;pseudo=true
NZ_CAAR01000079.1	Protein Homology	CDS	5426	6468	.	+	0	ID=cds-STY7866_RS02405;Parent=gene-STY7866_RS02405;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=6468,.;gbkey=CDS;gene=pgtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456939.1;locus_tag=STY7866_RS02405;partial=true;product=two-component system sensor histidine kinase PgtB;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000078.1 1 1675
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000078.1	RefSeq	region	1	1675	.	+	.	ID=NZ_CAAR01000078.1:1..1675;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000078.1	RefSeq	gene	4	1059	.	-	.	ID=gene-STY7866_RS02370;Name=STY7866_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02370
NZ_CAAR01000078.1	Protein Homology	CDS	4	1059	.	-	0	ID=cds-WP_000987844.1;Parent=gene-STY7866_RS02370;Dbxref=Genbank:WP_000987844.1;Name=WP_000987844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455056.1;locus_tag=STY7866_RS02370;product=PLP-dependent cysteine synthase family protein;protein_id=WP_000987844.1;transl_table=11
NZ_CAAR01000078.1	RefSeq	pseudogene	1172	1629	.	+	.	ID=gene-STY7866_RS02375;Name=STY7866_RS02375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS02375;pseudo=true
NZ_CAAR01000078.1	Protein Homology	CDS	1172	1629	.	+	0	ID=cds-STY7866_RS02375;Parent=gene-STY7866_RS02375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455057.1;locus_tag=STY7866_RS02375;product=Lrp/AsnC family transcriptional regulator;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000077.1 1 512
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000077.1	RefSeq	region	1	512	.	+	.	ID=NZ_CAAR01000077.1:1..512;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000077.1	RefSeq	pseudogene	1	386	.	-	.	ID=gene-STY7866_RS02365;Name=STY7866_RS02365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS02365;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000077.1	Protein Homology	CDS	1	386	.	-	0	ID=cds-STY7866_RS02365;Parent=gene-STY7866_RS02365;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454841.1;locus_tag=STY7866_RS02365;partial=true;product=chitinase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000076.1 1 121
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000076.1	RefSeq	region	1	121	.	+	.	ID=NZ_CAAR01000076.1:1..121;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000075.1 1 399
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000075.1	RefSeq	region	1	399	.	+	.	ID=NZ_CAAR01000075.1:1..399;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000075.1	RefSeq	gene	1	247	.	+	.	ID=gene-STY7866_RS26375;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=STY7866_RS26375;partial=true;start_range=.,1
NZ_CAAR01000075.1	Protein Homology	CDS	1	247	.	+	1	ID=cds-WP_000408261.1;Parent=gene-STY7866_RS26375;Dbxref=Genbank:WP_000408261.1;Name=WP_000408261.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455587.1;locus_tag=STY7866_RS26375;partial=true;product=type III secretion system chaperone SigE;protein_id=WP_000408261.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000074.1 1 17727
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000074.1	RefSeq	region	1	17727	.	+	.	ID=NZ_CAAR01000074.1:1..17727;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000074.1	RefSeq	gene	167	649	.	+	.	ID=gene-STY7866_RS02260;Name=STY7866_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02260
NZ_CAAR01000074.1	Protein Homology	CDS	167	649	.	+	0	ID=cds-WP_000377432.1;Parent=gene-STY7866_RS02260;Dbxref=Genbank:WP_000377432.1;Name=WP_000377432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455187.1;locus_tag=STY7866_RS02260;product=molecular chaperone;protein_id=WP_000377432.1;transl_table=11
NZ_CAAR01000074.1	RefSeq	gene	720	2999	.	+	.	ID=gene-STY7866_RS02265;Name=STY7866_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02265
NZ_CAAR01000074.1	Protein Homology	CDS	720	2999	.	+	0	ID=cds-WP_000064331.1;Parent=gene-STY7866_RS02265;Dbxref=Genbank:WP_000064331.1;Name=WP_000064331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455188.1;locus_tag=STY7866_RS02265;product=molybdopterin-dependent oxidoreductase;protein_id=WP_000064331.1;transl_table=11
NZ_CAAR01000074.1	RefSeq	gene	2996	3553	.	+	.	ID=gene-STY7866_RS02270;Name=STY7866_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02270
NZ_CAAR01000074.1	Protein Homology	CDS	2996	3553	.	+	0	ID=cds-WP_001250378.1;Parent=gene-STY7866_RS02270;Dbxref=Genbank:WP_001250378.1;Name=WP_001250378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455189.1;locus_tag=STY7866_RS02270;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001250378.1;transl_table=11
NZ_CAAR01000074.1	RefSeq	gene	3553	4320	.	+	.	ID=gene-STY7866_RS02275;Name=STY7866_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02275
NZ_CAAR01000074.1	Protein Homology	CDS	3553	4320	.	+	0	ID=cds-WP_000417104.1;Parent=gene-STY7866_RS02275;Dbxref=Genbank:WP_000417104.1;Name=WP_000417104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455190.1;locus_tag=STY7866_RS02275;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WP_000417104.1;transl_table=11
NZ_CAAR01000074.1	RefSeq	gene	4388	4816	.	-	.	ID=gene-STY7866_RS02280;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=STY7866_RS02280
NZ_CAAR01000074.1	Protein Homology	CDS	4388	4816	.	-	0	ID=cds-WP_000278499.1;Parent=gene-STY7866_RS02280;Dbxref=Genbank:WP_000278499.1;Name=WP_000278499.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455191.1;locus_tag=STY7866_RS02280;product=universal stress protein UspG;protein_id=WP_000278499.1;transl_table=11
NZ_CAAR01000074.1	RefSeq	gene	5039	6277	.	+	.	ID=gene-STY7866_RS02285;Name=STY7866_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02285
NZ_CAAR01000074.1	Protein Homology	CDS	5039	6277	.	+	0	ID=cds-WP_000646123.1;Parent=gene-STY7866_RS02285;Dbxref=Genbank:WP_000646123.1;Name=WP_000646123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455192.1;locus_tag=STY7866_RS02285;product=glutathione-dependent formaldehyde dehydrogenase;protein_id=WP_000646123.1;transl_table=11
NZ_CAAR01000074.1	RefSeq	gene	6360	6770	.	-	.	ID=gene-STY7866_RS02290;Name=STY7866_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02290
NZ_CAAR01000074.1	Protein Homology	CDS	6360	6770	.	-	0	ID=cds-WP_000089748.1;Parent=gene-STY7866_RS02290;Dbxref=Genbank:WP_000089748.1;Name=WP_000089748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455193.1;locus_tag=STY7866_RS02290;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089748.1;transl_table=11
NZ_CAAR01000074.1	RefSeq	gene	7005	7811	.	-	.	ID=gene-STY7866_RS02295;Name=STY7866_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02295
NZ_CAAR01000074.1	Protein Homology	CDS	7005	7811	.	-	0	ID=cds-WP_001092588.1;Parent=gene-STY7866_RS02295;Dbxref=Genbank:WP_001092588.1;Name=WP_001092588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455194.1;locus_tag=STY7866_RS02295;product=ribonuclease I;protein_id=WP_001092588.1;transl_table=11
NZ_CAAR01000074.1	RefSeq	gene	7921	9432	.	-	.	ID=gene-STY7866_RS02300;Name=STY7866_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02300
NZ_CAAR01000074.1	Protein Homology	CDS	7921	9432	.	-	0	ID=cds-WP_000059034.1;Parent=gene-STY7866_RS02300;Dbxref=Genbank:WP_000059034.1;Name=WP_000059034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455195.1;locus_tag=STY7866_RS02300;product=anion permease;protein_id=WP_000059034.1;transl_table=11
NZ_CAAR01000074.1	RefSeq	gene	9470	10366	.	-	.	ID=gene-STY7866_RS02305;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=STY7866_RS02305
NZ_CAAR01000074.1	Protein Homology	CDS	9470	10366	.	-	0	ID=cds-WP_000982670.1;Parent=gene-STY7866_RS02305;Dbxref=Genbank:WP_000982670.1;Name=WP_000982670.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455196.1;locus_tag=STY7866_RS02305;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000982670.1;transl_table=11
NZ_CAAR01000074.1	RefSeq	gene	10338	10916	.	-	.	ID=gene-STY7866_RS02310;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=STY7866_RS02310
NZ_CAAR01000074.1	Protein Homology	CDS	10338	10916	.	-	0	ID=cds-WP_001681995.1;Parent=gene-STY7866_RS02310;Dbxref=Genbank:WP_001681995.1;Name=WP_001681995.1;gbkey=CDS;gene=citX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455197.2;locus_tag=STY7866_RS02310;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_001681995.1;transl_table=11
NZ_CAAR01000074.1	RefSeq	gene	10787	12316	.	-	.	ID=gene-STY7866_RS02315;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=STY7866_RS02315
NZ_CAAR01000074.1	Protein Homology	CDS	10787	12316	.	-	0	ID=cds-WP_000192343.1;Parent=gene-STY7866_RS02315;Dbxref=Genbank:WP_000192343.1;Name=WP_000192343.1;gbkey=CDS;gene=citF;inference=COORDINATES: protein motif:HMM:TIGR01584.1;locus_tag=STY7866_RS02315;product=citrate lyase subunit alpha;protein_id=WP_000192343.1;transl_table=11
NZ_CAAR01000074.1	RefSeq	gene	12326	13234	.	-	.	ID=gene-STY7866_RS02320;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=STY7866_RS02320
NZ_CAAR01000074.1	Protein Homology	CDS	12326	13234	.	-	0	ID=cds-WP_000622335.1;Parent=gene-STY7866_RS02320;Dbxref=Genbank:WP_000622335.1;Name=WP_000622335.1;gbkey=CDS;gene=citE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455199.1;locus_tag=STY7866_RS02320;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622335.1;transl_table=11
NZ_CAAR01000074.1	RefSeq	gene	13231	13527	.	-	.	ID=gene-STY7866_RS02325;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=STY7866_RS02325
NZ_CAAR01000074.1	Protein Homology	CDS	13231	13527	.	-	0	ID=cds-WP_000700679.1;Parent=gene-STY7866_RS02325;Dbxref=Genbank:WP_000700679.1;Name=WP_000700679.1;gbkey=CDS;gene=citD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455200.1;locus_tag=STY7866_RS02325;product=citrate lyase acyl carrier protein;protein_id=WP_000700679.1;transl_table=11
NZ_CAAR01000074.1	RefSeq	pseudogene	13524	14599	.	-	.	ID=gene-STY7866_RS02330;Name=citC;gbkey=Gene;gene=citC;gene_biotype=pseudogene;locus_tag=STY7866_RS02330;pseudo=true
NZ_CAAR01000074.1	Protein Homology	CDS	13524	14599	.	-	0	ID=cds-STY7866_RS02330;Parent=gene-STY7866_RS02330;Note=frameshifted;gbkey=CDS;gene=citC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=STY7866_RS02330;product=[citrate (pro-3S)-lyase] ligase;pseudo=true;transl_table=11
NZ_CAAR01000074.1	RefSeq	gene	14984	16645	.	+	.	ID=gene-STY7866_RS02335;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=STY7866_RS02335
NZ_CAAR01000074.1	Protein Homology	CDS	14984	16645	.	+	0	ID=cds-WP_000121811.1;Parent=gene-STY7866_RS02335;Dbxref=Genbank:WP_000121811.1;Name=WP_000121811.1;gbkey=CDS;gene=dpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455202.1;locus_tag=STY7866_RS02335;product=sensor histidine kinase DpiB;protein_id=WP_000121811.1;transl_table=11
NZ_CAAR01000074.1	RefSeq	gene	16614	17294	.	+	.	ID=gene-STY7866_RS02340;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=STY7866_RS02340
NZ_CAAR01000074.1	Protein Homology	CDS	16614	17294	.	+	0	ID=cds-WP_000138786.1;Parent=gene-STY7866_RS02340;Dbxref=Genbank:WP_000138786.1;Name=WP_000138786.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455203.1;locus_tag=STY7866_RS02340;product=two-component response regulator DpiA;protein_id=WP_000138786.1;transl_table=11
NZ_CAAR01000074.1	RefSeq	pseudogene	17348	17727	.	-	.	ID=gene-STY7866_RS02345;Name=dcuC;end_range=17727,.;gbkey=Gene;gene=dcuC;gene_biotype=pseudogene;locus_tag=STY7866_RS02345;partial=true;pseudo=true
NZ_CAAR01000074.1	Protein Homology	CDS	17348	17727	.	-	2	ID=cds-STY7866_RS02345;Parent=gene-STY7866_RS02345;Note=responsible for the transport of C4-dicarboxylates during anaerobic growth%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=17727,.;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455204.1;locus_tag=STY7866_RS02345;partial=true;product=anaerobic C4-dicarboxylate transporter DcuC;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000073.1 1 2050
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000073.1	RefSeq	region	1	2050	.	+	.	ID=NZ_CAAR01000073.1:1..2050;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000073.1	RefSeq	gene	35	122	.	-	.	ID=gene-STY7866_RS02230;Name=STY7866_RS02230;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS02230
NZ_CAAR01000073.1	tRNAscan-SE	tRNA	35	122	.	-	.	ID=rna-STY7866_RS02230;Parent=gene-STY7866_RS02230;anticodon=(pos:complement(86..88));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS02230;product=tRNA-Ser
NZ_CAAR01000073.1	tRNAscan-SE	exon	35	122	.	-	.	ID=exon-STY7866_RS02230-1;Parent=rna-STY7866_RS02230;anticodon=(pos:complement(86..88));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS02230;product=tRNA-Ser
NZ_CAAR01000073.1	RefSeq	gene	517	1176	.	+	.	ID=gene-STY7866_RS02240;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=STY7866_RS02240
NZ_CAAR01000073.1	Protein Homology	CDS	517	1176	.	+	0	ID=cds-WP_000374046.1;Parent=gene-STY7866_RS02240;Dbxref=Genbank:WP_000374046.1;Name=WP_000374046.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=STY7866_RS02240;product=FtsH protease modulator YccA;protein_id=WP_000374046.1;transl_table=11
NZ_CAAR01000073.1	RefSeq	gene	1263	1592	.	+	.	ID=gene-STY7866_RS02245;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=STY7866_RS02245
NZ_CAAR01000073.1	Protein Homology	CDS	1263	1592	.	+	0	ID=cds-WP_000904446.1;Parent=gene-STY7866_RS02245;Dbxref=Genbank:WP_000904446.1;Name=WP_000904446.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455582.1;locus_tag=STY7866_RS02245;product=sulfurtransferase TusE;protein_id=WP_000904446.1;transl_table=11
NZ_CAAR01000073.1	RefSeq	gene	1589	1870	.	-	.	ID=gene-STY7866_RS02250;Name=STY7866_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02250
NZ_CAAR01000073.1	Protein Homology	CDS	1589	1870	.	-	0	ID=cds-WP_000072885.1;Parent=gene-STY7866_RS02250;Dbxref=Genbank:WP_000072885.1;Name=WP_000072885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455581.1;locus_tag=STY7866_RS02250;product=acylphosphatase;protein_id=WP_000072885.1;transl_table=11
NZ_CAAR01000073.1	RefSeq	gene	1919	2050	.	-	.	ID=gene-STY7866_RS26795;Name=STY7866_RS26795;end_range=2050,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26795;partial=true
NZ_CAAR01000073.1	Protein Homology	CDS	1919	2050	.	-	0	ID=cds-WP_151259996.1;Parent=gene-STY7866_RS26795;Dbxref=Genbank:WP_151259996.1;Name=WP_151259996.1;end_range=2050,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=STY7866_RS26795;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_151259996.1;transl_table=11
##sequence-region NZ_CAAR01000072.1 1 3318
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000072.1	RefSeq	region	1	3318	.	+	.	ID=NZ_CAAR01000072.1:1..3318;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000072.1	RefSeq	gene	136	2841	.	-	.	ID=gene-STY7866_RS02220;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=STY7866_RS02220
NZ_CAAR01000072.1	Protein Homology	CDS	136	2841	.	-	0	ID=cds-WP_000905763.1;Parent=gene-STY7866_RS02220;Dbxref=Genbank:WP_000905763.1;Name=WP_000905763.1;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454748.1;locus_tag=STY7866_RS02220;product=preprotein translocase subunit SecA;protein_id=WP_000905763.1;transl_table=11
NZ_CAAR01000072.1	RefSeq	gene	2903	3318	.	-	.	ID=gene-STY7866_RS02225;Name=secM;end_range=3318,.;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=STY7866_RS02225;partial=true
NZ_CAAR01000072.1	Protein Homology	CDS	2903	3318	.	-	2	ID=cds-WP_000396232.1;Parent=gene-STY7866_RS02225;Dbxref=Genbank:WP_000396232.1;Name=WP_000396232.1;end_range=3318,.;gbkey=CDS;gene=secM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459140.3;locus_tag=STY7866_RS02225;partial=true;product=secA regulator SecM;protein_id=WP_000396232.1;transl_table=11
##sequence-region NZ_CAAR01000071.1 1 120
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000071.1	RefSeq	region	1	120	.	+	.	ID=NZ_CAAR01000071.1:1..120;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000070.1 1 4132
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000070.1	RefSeq	region	1	4132	.	+	.	ID=NZ_CAAR01000070.1:1..4132;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000070.1	RefSeq	gene	1	2046	.	+	.	ID=gene-STY7866_RS02195;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=STY7866_RS02195;partial=true;start_range=.,1
NZ_CAAR01000070.1	Protein Homology	CDS	1	2046	.	+	0	ID=cds-WP_000630110.1;Parent=gene-STY7866_RS02195;Dbxref=Genbank:WP_000630110.1;Name=WP_000630110.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458955.1;locus_tag=STY7866_RS02195;partial=true;product=pyruvate/proton symporter BtsT;protein_id=WP_000630110.1;start_range=.,1;transl_table=11
NZ_CAAR01000070.1	RefSeq	gene	2141	2344	.	+	.	ID=gene-STY7866_RS02200;Name=STY7866_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02200
NZ_CAAR01000070.1	Protein Homology	CDS	2141	2344	.	+	0	ID=cds-WP_000460616.1;Parent=gene-STY7866_RS02200;Dbxref=Genbank:WP_000460616.1;Name=WP_000460616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458954.1;locus_tag=STY7866_RS02200;product=YbdD/YjiX family protein;protein_id=WP_000460616.1;transl_table=11
NZ_CAAR01000070.1	RefSeq	gene	2355	3311	.	+	.	ID=gene-STY7866_RS02205;Name=STY7866_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02205
NZ_CAAR01000070.1	Protein Homology	CDS	2355	3311	.	+	0	ID=cds-WP_000187846.1;Parent=gene-STY7866_RS02205;Dbxref=Genbank:WP_000187846.1;Name=WP_000187846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458953.1;locus_tag=STY7866_RS02205;product=GTPase;protein_id=WP_000187846.1;transl_table=11
NZ_CAAR01000070.1	RefSeq	gene	3386	3688	.	-	.	ID=gene-STY7866_RS02210;Name=STY7866_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02210
NZ_CAAR01000070.1	Protein Homology	CDS	3386	3688	.	-	0	ID=cds-WP_000063142.1;Parent=gene-STY7866_RS02210;Dbxref=Genbank:WP_000063142.1;Name=WP_000063142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458952.1;locus_tag=STY7866_RS02210;product=BrnA antitoxin family protein;protein_id=WP_000063142.1;transl_table=11
NZ_CAAR01000070.1	RefSeq	gene	3675	3962	.	-	.	ID=gene-STY7866_RS02215;Name=STY7866_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02215
NZ_CAAR01000070.1	Protein Homology	CDS	3675	3962	.	-	0	ID=cds-WP_001131963.1;Parent=gene-STY7866_RS02215;Dbxref=Genbank:WP_001131963.1;Name=WP_001131963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458951.1;locus_tag=STY7866_RS02215;product=membrane protein;protein_id=WP_001131963.1;transl_table=11
##sequence-region NZ_CAAR01000069.1 1 7931
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000069.1	RefSeq	region	1	7931	.	+	.	ID=NZ_CAAR01000069.1:1..7931;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000069.1	RefSeq	gene	61	351	.	+	.	ID=gene-STY7866_RS02145;Name=STY7866_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02145
NZ_CAAR01000069.1	Protein Homology	CDS	61	351	.	+	0	ID=cds-WP_000745961.1;Parent=gene-STY7866_RS02145;Dbxref=Genbank:WP_000745961.1;Name=WP_000745961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454692.1;locus_tag=STY7866_RS02145;product=DUF1471 domain-containing protein;protein_id=WP_000745961.1;transl_table=11
NZ_CAAR01000069.1	RefSeq	gene	575	997	.	-	.	ID=gene-STY7866_RS02150;Name=STY7866_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02150
NZ_CAAR01000069.1	Protein Homology	CDS	575	997	.	-	0	ID=cds-WP_000768932.1;Parent=gene-STY7866_RS02150;Dbxref=Genbank:WP_000768932.1;Name=WP_000768932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454691.1;locus_tag=STY7866_RS02150;product=hypothetical protein;protein_id=WP_000768932.1;transl_table=11
NZ_CAAR01000069.1	RefSeq	gene	1282	1512	.	-	.	ID=gene-STY7866_RS02155;Name=STY7866_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02155
NZ_CAAR01000069.1	Protein Homology	CDS	1282	1512	.	-	0	ID=cds-WP_001172089.1;Parent=gene-STY7866_RS02155;Dbxref=Genbank:WP_001172089.1;Name=WP_001172089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454690.1;locus_tag=STY7866_RS02155;product=YgdI/YgdR family lipoprotein;protein_id=WP_001172089.1;transl_table=11
NZ_CAAR01000069.1	RefSeq	gene	1601	2941	.	-	.	ID=gene-STY7866_RS02160;Name=STY7866_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02160
NZ_CAAR01000069.1	Protein Homology	CDS	1601	2941	.	-	0	ID=cds-WP_001136168.1;Parent=gene-STY7866_RS02160;Dbxref=Genbank:WP_001136168.1;Name=WP_001136168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=STY7866_RS02160;product=MFS transporter;protein_id=WP_001136168.1;transl_table=11
NZ_CAAR01000069.1	RefSeq	gene	3089	3376	.	-	.	ID=gene-STY7866_RS02165;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=STY7866_RS02165
NZ_CAAR01000069.1	Protein Homology	CDS	3089	3376	.	-	0	ID=cds-WP_000203737.1;Parent=gene-STY7866_RS02165;Dbxref=Genbank:WP_000203737.1;Name=WP_000203737.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454688.1;locus_tag=STY7866_RS02165;product=ferredoxin-like protein FixX;protein_id=WP_000203737.1;transl_table=11
NZ_CAAR01000069.1	RefSeq	gene	3373	4659	.	-	.	ID=gene-STY7866_RS02170;Name=STY7866_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02170
NZ_CAAR01000069.1	Protein Homology	CDS	3373	4659	.	-	0	ID=cds-WP_001287774.1;Parent=gene-STY7866_RS02170;Dbxref=Genbank:WP_001287774.1;Name=WP_001287774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454687.1;locus_tag=STY7866_RS02170;product=FAD-dependent oxidoreductase;protein_id=WP_001287774.1;transl_table=11
NZ_CAAR01000069.1	RefSeq	gene	4709	5650	.	-	.	ID=gene-STY7866_RS02175;Name=STY7866_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02175
NZ_CAAR01000069.1	Protein Homology	CDS	4709	5650	.	-	0	ID=cds-WP_001032189.1;Parent=gene-STY7866_RS02175;Dbxref=Genbank:WP_001032189.1;Name=WP_001032189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454686.1;locus_tag=STY7866_RS02175;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001032189.1;transl_table=11
NZ_CAAR01000069.1	RefSeq	gene	5666	6436	.	-	.	ID=gene-STY7866_RS02180;Name=STY7866_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02180
NZ_CAAR01000069.1	Protein Homology	CDS	5666	6436	.	-	0	ID=cds-WP_000692187.1;Parent=gene-STY7866_RS02180;Dbxref=Genbank:WP_000692187.1;Name=WP_000692187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454685.1;locus_tag=STY7866_RS02180;product=electron transfer flavoprotein FixA;protein_id=WP_000692187.1;transl_table=11
NZ_CAAR01000069.1	RefSeq	pseudogene	6917	7931	.	+	.	ID=gene-STY7866_RS02190;Name=caiT;end_range=7931,.;gbkey=Gene;gene=caiT;gene_biotype=pseudogene;locus_tag=STY7866_RS02190;partial=true;pseudo=true
NZ_CAAR01000069.1	Protein Homology	CDS	6917	7931	.	+	0	ID=cds-STY7866_RS02190;Parent=gene-STY7866_RS02190;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=7931,.;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454684.1;locus_tag=STY7866_RS02190;partial=true;product=L-carnitine/gamma-butyrobetaine antiport BCCT transporter;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000068.1 1 1065
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000068.1	RefSeq	region	1	1065	.	+	.	ID=NZ_CAAR01000068.1:1..1065;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000068.1	RefSeq	gene	520	741	.	-	.	ID=gene-STY7866_RS02140;Name=STY7866_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02140
NZ_CAAR01000068.1	Protein Homology	CDS	520	741	.	-	0	ID=cds-WP_000825645.1;Parent=gene-STY7866_RS02140;Dbxref=Genbank:WP_000825645.1;Name=WP_000825645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457764.1;locus_tag=STY7866_RS02140;product=membrane protein;protein_id=WP_000825645.1;transl_table=11
##sequence-region NZ_CAAR01000067.1 1 8761
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000067.1	RefSeq	region	1	8761	.	+	.	ID=NZ_CAAR01000067.1:1..8761;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000067.1	RefSeq	gene	29	466	.	-	.	ID=gene-STY7866_RS02100;Name=STY7866_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02100
NZ_CAAR01000067.1	Protein Homology	CDS	29	466	.	-	0	ID=cds-WP_000973251.1;Parent=gene-STY7866_RS02100;Dbxref=Genbank:WP_000973251.1;Name=WP_000973251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458501.1;locus_tag=STY7866_RS02100;product=acetyltransferase;protein_id=WP_000973251.1;transl_table=11
NZ_CAAR01000067.1	RefSeq	gene	623	1552	.	+	.	ID=gene-STY7866_RS02105;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=STY7866_RS02105
NZ_CAAR01000067.1	Protein Homology	CDS	623	1552	.	+	0	ID=cds-WP_001122765.1;Parent=gene-STY7866_RS02105;Dbxref=Genbank:WP_001122765.1;Name=WP_001122765.1;gbkey=CDS;gene=metA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=STY7866_RS02105;product=homoserine O-succinyltransferase;protein_id=WP_001122765.1;transl_table=11
NZ_CAAR01000067.1	RefSeq	pseudogene	1821	3421	.	+	.	ID=gene-STY7866_RS02110;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=pseudogene;locus_tag=STY7866_RS02110;pseudo=true
NZ_CAAR01000067.1	Protein Homology	CDS	1821	3421	.	+	0	ID=cds-STY7866_RS02110;Parent=gene-STY7866_RS02110;Note=frameshifted;gbkey=CDS;gene=aceB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458503.1;locus_tag=STY7866_RS02110;product=malate synthase A;pseudo=true;transl_table=11
NZ_CAAR01000067.1	RefSeq	gene	3453	4757	.	+	.	ID=gene-STY7866_RS02115;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=STY7866_RS02115
NZ_CAAR01000067.1	Protein Homology	CDS	3453	4757	.	+	0	ID=cds-WP_000857886.1;Parent=gene-STY7866_RS02115;Dbxref=Genbank:WP_000857886.1;Name=WP_000857886.1;gbkey=CDS;gene=aceA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458504.1;locus_tag=STY7866_RS02115;product=isocitrate lyase;protein_id=WP_000857886.1;transl_table=11
NZ_CAAR01000067.1	RefSeq	gene	4858	6639	.	+	.	ID=gene-STY7866_RS02120;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=STY7866_RS02120
NZ_CAAR01000067.1	Protein Homology	CDS	4858	6639	.	+	0	ID=cds-WP_001137261.1;Parent=gene-STY7866_RS02120;Dbxref=Genbank:WP_001137261.1;Name=WP_001137261.1;gbkey=CDS;gene=aceK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458505.1;locus_tag=STY7866_RS02120;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001137261.1;transl_table=11
NZ_CAAR01000067.1	RefSeq	gene	6684	7508	.	-	.	ID=gene-STY7866_RS02125;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=STY7866_RS02125
NZ_CAAR01000067.1	Protein Homology	CDS	6684	7508	.	-	0	ID=cds-WP_000226433.1;Parent=gene-STY7866_RS02125;Dbxref=Genbank:WP_000226433.1;Name=WP_000226433.1;gbkey=CDS;gene=iclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458506.1;locus_tag=STY7866_RS02125;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226433.1;transl_table=11
NZ_CAAR01000067.1	RefSeq	pseudogene	7812	8761	.	+	.	ID=gene-STY7866_RS02135;Name=metH;end_range=8761,.;gbkey=Gene;gene=metH;gene_biotype=pseudogene;locus_tag=STY7866_RS02135;partial=true;pseudo=true
NZ_CAAR01000067.1	Protein Homology	CDS	7812	8761	.	+	0	ID=cds-STY7866_RS02135;Parent=gene-STY7866_RS02135;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=8761,.;gbkey=CDS;gene=metH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000096005.1;locus_tag=STY7866_RS02135;partial=true;product=methionine synthase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000066.1 1 1478
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000066.1	RefSeq	region	1	1478	.	+	.	ID=NZ_CAAR01000066.1:1..1478;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000066.1	RefSeq	gene	9	84	.	+	.	ID=gene-STY7866_RS02085;Name=STY7866_RS02085;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS02085
NZ_CAAR01000066.1	tRNAscan-SE	tRNA	9	84	.	+	.	ID=rna-STY7866_RS02085;Parent=gene-STY7866_RS02085;anticodon=(pos:42..44);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS02085;product=tRNA-Trp
NZ_CAAR01000066.1	tRNAscan-SE	exon	9	84	.	+	.	ID=exon-STY7866_RS02085-1;Parent=rna-STY7866_RS02085;anticodon=(pos:42..44);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS02085;product=tRNA-Trp
NZ_CAAR01000066.1	RefSeq	gene	187	1035	.	-	.	ID=gene-STY7866_RS02090;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=STY7866_RS02090
NZ_CAAR01000066.1	Protein Homology	CDS	187	1035	.	-	0	ID=cds-WP_001541181.1;Parent=gene-STY7866_RS02090;Dbxref=Genbank:WP_001541181.1;Name=WP_001541181.1;gbkey=CDS;gene=hdfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=STY7866_RS02090;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001541181.1;transl_table=11
NZ_CAAR01000066.1	RefSeq	gene	1142	1478	.	+	.	ID=gene-STY7866_RS02095;Name=STY7866_RS02095;end_range=1478,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS02095;partial=true
NZ_CAAR01000066.1	Protein Homology	CDS	1142	1478	.	+	0	ID=cds-WP_000840996.1;Parent=gene-STY7866_RS02095;Dbxref=Genbank:WP_000840996.1;Name=WP_000840996.1;end_range=1478,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457896.1;locus_tag=STY7866_RS02095;partial=true;product=macrodomain Ori organization protein MaoP;protein_id=WP_000840996.1;transl_table=11
##sequence-region NZ_CAAR01000065.1 1 339
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000065.1	RefSeq	region	1	339	.	+	.	ID=NZ_CAAR01000065.1:1..339;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000065.1	RefSeq	gene	57	132	.	-	.	ID=gene-STY7866_RS02075;Name=STY7866_RS02075;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS02075
NZ_CAAR01000065.1	tRNAscan-SE	tRNA	57	132	.	-	.	ID=rna-STY7866_RS02075;Parent=gene-STY7866_RS02075;anticodon=(pos:complement(97..99));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS02075;product=tRNA-Ala
NZ_CAAR01000065.1	tRNAscan-SE	exon	57	132	.	-	.	ID=exon-STY7866_RS02075-1;Parent=rna-STY7866_RS02075;anticodon=(pos:complement(97..99));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS02075;product=tRNA-Ala
NZ_CAAR01000065.1	RefSeq	gene	244	320	.	-	.	ID=gene-STY7866_RS02080;Name=STY7866_RS02080;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS02080
NZ_CAAR01000065.1	tRNAscan-SE	tRNA	244	320	.	-	.	ID=rna-STY7866_RS02080;Parent=gene-STY7866_RS02080;anticodon=(pos:complement(284..286));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS02080;product=tRNA-Ile
NZ_CAAR01000065.1	tRNAscan-SE	exon	244	320	.	-	.	ID=exon-STY7866_RS02080-1;Parent=rna-STY7866_RS02080;anticodon=(pos:complement(284..286));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS02080;product=tRNA-Ile
##sequence-region NZ_CAAR01000064.1 1 6475
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000064.1	RefSeq	region	1	6475	.	+	.	ID=NZ_CAAR01000064.1:1..6475;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000064.1	RefSeq	gene	47	634	.	-	.	ID=gene-STY7866_RS02040;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=STY7866_RS02040
NZ_CAAR01000064.1	Protein Homology	CDS	47	634	.	-	0	ID=cds-WP_001140157.1;Parent=gene-STY7866_RS02040;Dbxref=Genbank:WP_001140157.1;Name=WP_001140157.1;gbkey=CDS;gene=gmhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140157.1;locus_tag=STY7866_RS02040;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001140157.1;transl_table=11
NZ_CAAR01000064.1	RefSeq	gene	824	1855	.	+	.	ID=gene-STY7866_RS02045;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=STY7866_RS02045
NZ_CAAR01000064.1	Protein Homology	CDS	824	1855	.	+	0	ID=cds-WP_000594016.1;Parent=gene-STY7866_RS02045;Dbxref=Genbank:WP_000594016.1;Name=WP_000594016.1;gbkey=CDS;gene=metN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=STY7866_RS02045;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594016.1;transl_table=11
NZ_CAAR01000064.1	RefSeq	gene	1848	2501	.	+	.	ID=gene-STY7866_RS02050;Name=metI;gbkey=Gene;gene=metI;gene_biotype=protein_coding;locus_tag=STY7866_RS02050
NZ_CAAR01000064.1	Protein Homology	CDS	1848	2501	.	+	0	ID=cds-WP_001287483.1;Parent=gene-STY7866_RS02050;Dbxref=Genbank:WP_001287483.1;Name=WP_001287483.1;gbkey=CDS;gene=metI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=STY7866_RS02050;product=methionine ABC transporter permease MetI;protein_id=WP_001287483.1;transl_table=11
NZ_CAAR01000064.1	RefSeq	gene	2540	3355	.	+	.	ID=gene-STY7866_RS02055;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=STY7866_RS02055
NZ_CAAR01000064.1	Protein Homology	CDS	2540	3355	.	+	0	ID=cds-WP_000874217.1;Parent=gene-STY7866_RS02055;Dbxref=Genbank:WP_000874217.1;Name=WP_000874217.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454854.1;locus_tag=STY7866_RS02055;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874217.1;transl_table=11
NZ_CAAR01000064.1	RefSeq	gene	3474	3878	.	+	.	ID=gene-STY7866_RS02060;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=STY7866_RS02060
NZ_CAAR01000064.1	Protein Homology	CDS	3474	3878	.	+	0	ID=cds-WP_001202315.1;Parent=gene-STY7866_RS02060;Dbxref=Genbank:WP_001202315.1;Name=WP_001202315.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454853.1;locus_tag=STY7866_RS02060;product=Rcs stress response system protein RcsF;protein_id=WP_001202315.1;transl_table=11
NZ_CAAR01000064.1	RefSeq	gene	3875	4582	.	+	.	ID=gene-STY7866_RS02065;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=STY7866_RS02065
NZ_CAAR01000064.1	Protein Homology	CDS	3875	4582	.	+	0	ID=cds-WP_000093978.1;Parent=gene-STY7866_RS02065;Dbxref=Genbank:WP_000093978.1;Name=WP_000093978.1;gbkey=CDS;gene=tsaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454852.1;locus_tag=STY7866_RS02065;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000093978.1;transl_table=11
NZ_CAAR01000064.1	RefSeq	gene	4693	6411	.	+	.	ID=gene-STY7866_RS02070;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=STY7866_RS02070
NZ_CAAR01000064.1	Protein Homology	CDS	4693	6411	.	+	0	ID=cds-WP_001260683.1;Parent=gene-STY7866_RS02070;Dbxref=Genbank:WP_001260683.1;Name=WP_001260683.1;gbkey=CDS;gene=proS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=STY7866_RS02070;product=proline--tRNA ligase;protein_id=WP_001260683.1;transl_table=11
##sequence-region NZ_CAAR01000063.1 1 1513
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000063.1	RefSeq	region	1	1513	.	+	.	ID=NZ_CAAR01000063.1:1..1513;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000063.1	RefSeq	gene	320	1513	.	+	.	ID=gene-STY7866_RS02035;Name=purH;end_range=1513,.;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=STY7866_RS02035;partial=true
NZ_CAAR01000063.1	Protein Homology	CDS	320	1513	.	+	0	ID=cds-WP_001187499.1;Parent=gene-STY7866_RS02035;Dbxref=Genbank:WP_001187499.1;Name=WP_001187499.1;end_range=1513,.;gbkey=CDS;gene=purH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=STY7866_RS02035;partial=true;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_001187499.1;transl_table=11
##sequence-region NZ_CAAR01000062.1 1 3828
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000062.1	RefSeq	region	1	3828	.	+	.	ID=NZ_CAAR01000062.1:1..3828;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000062.1	RefSeq	gene	1	786	.	-	.	ID=gene-STY7866_RS02015;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=STY7866_RS02015;partial=true;start_range=.,1
NZ_CAAR01000062.1	Protein Homology	CDS	1	786	.	-	0	ID=cds-WP_000186985.1;Parent=gene-STY7866_RS02015;Dbxref=Genbank:WP_000186985.1;Name=WP_000186985.1;gbkey=CDS;gene=trmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457931.1;locus_tag=STY7866_RS02015;partial=true;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000186985.1;start_range=.,1;transl_table=11
NZ_CAAR01000062.1	cmsearch	riboswitch	901	1094	.	+	.	ID=id-NZ_CAAR01000062.1:901..1094;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_CAAR01000062.1	RefSeq	gene	1160	3004	.	+	.	ID=gene-STY7866_RS02020;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=STY7866_RS02020
NZ_CAAR01000062.1	Protein Homology	CDS	1160	3004	.	+	0	ID=cds-WP_000591414.1;Parent=gene-STY7866_RS02020;Dbxref=Genbank:WP_000591414.1;Name=WP_000591414.1;gbkey=CDS;gene=btuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457930.1;locus_tag=STY7866_RS02020;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_000591414.1;transl_table=11
NZ_CAAR01000062.1	RefSeq	gene	2949	3800	.	+	.	ID=gene-STY7866_RS02025;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=STY7866_RS02025
NZ_CAAR01000062.1	Protein Homology	CDS	2949	3800	.	+	0	ID=cds-WP_000201804.1;Parent=gene-STY7866_RS02025;Dbxref=Genbank:WP_000201804.1;Name=WP_000201804.1;gbkey=CDS;gene=murI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=STY7866_RS02025;product=glutamate racemase;protein_id=WP_000201804.1;transl_table=11
##sequence-region NZ_CAAR01000061.1 1 5956
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000061.1	RefSeq	region	1	5956	.	+	.	ID=NZ_CAAR01000061.1:1..5956;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000061.1	RefSeq	gene	223	2796	.	-	.	ID=gene-STY7866_RS01990;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=STY7866_RS01990
NZ_CAAR01000061.1	Protein Homology	CDS	223	2796	.	-	0	ID=cds-WP_001235094.1;Parent=gene-STY7866_RS01990;Dbxref=Genbank:WP_001235094.1;Name=WP_001235094.1;gbkey=CDS;gene=clpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=STY7866_RS01990;product=ATP-dependent chaperone ClpB;protein_id=WP_001235094.1;transl_table=11
NZ_CAAR01000061.1	RefSeq	gene	2926	3657	.	-	.	ID=gene-STY7866_RS01995;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=STY7866_RS01995
NZ_CAAR01000061.1	Protein Homology	CDS	2926	3657	.	-	0	ID=cds-WP_000992642.1;Parent=gene-STY7866_RS01995;Dbxref=Genbank:WP_000992642.1;Name=WP_000992642.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457132.1;locus_tag=STY7866_RS01995;product=polyphenol oxidase;protein_id=WP_000992642.1;transl_table=11
NZ_CAAR01000061.1	RefSeq	gene	3654	4634	.	-	.	ID=gene-STY7866_RS02000;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=STY7866_RS02000
NZ_CAAR01000061.1	Protein Homology	CDS	3654	4634	.	-	0	ID=cds-WP_000079130.1;Parent=gene-STY7866_RS02000;Dbxref=Genbank:WP_000079130.1;Name=WP_000079130.1;gbkey=CDS;gene=rluD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=STY7866_RS02000;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079130.1;transl_table=11
NZ_CAAR01000061.1	RefSeq	gene	4766	5503	.	+	.	ID=gene-STY7866_RS02005;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=STY7866_RS02005
NZ_CAAR01000061.1	Protein Homology	CDS	4766	5503	.	+	0	ID=cds-WP_000197667.1;Parent=gene-STY7866_RS02005;Dbxref=Genbank:WP_000197667.1;Name=WP_000197667.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457134.1;locus_tag=STY7866_RS02005;product=outer membrane protein assembly factor BamD;protein_id=WP_000197667.1;transl_table=11
NZ_CAAR01000061.1	RefSeq	gene	5775	5956	.	+	.	ID=gene-STY7866_RS02010;Name=raiA;end_range=5956,.;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=STY7866_RS02010;partial=true
NZ_CAAR01000061.1	Protein Homology	CDS	5775	5956	.	+	0	ID=cds-WP_001763851.1;Parent=gene-STY7866_RS02010;Dbxref=Genbank:WP_001763851.1;Name=WP_001763851.1;end_range=5956,.;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457135.1;locus_tag=STY7866_RS02010;partial=true;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_001763851.1;transl_table=11
##sequence-region NZ_CAAR01000060.1 1 1787
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000060.1	RefSeq	region	1	1787	.	+	.	ID=NZ_CAAR01000060.1:1..1787;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000060.1	RefSeq	gene	38	1591	.	-	.	ID=gene-STY7866_RS01985;Name=STY7866_RS01985;gbkey=Gene;gene_biotype=rRNA;locus_tag=STY7866_RS01985
NZ_CAAR01000060.1	RefSeq	rRNA	38	1591	.	-	.	ID=rna-STY7866_RS01985;Parent=gene-STY7866_RS01985;gbkey=rRNA;locus_tag=STY7866_RS01985;product=16S ribosomal RNA
NZ_CAAR01000060.1	RefSeq	exon	38	1591	.	-	.	ID=exon-STY7866_RS01985-1;Parent=rna-STY7866_RS01985;gbkey=rRNA;locus_tag=STY7866_RS01985;product=16S ribosomal RNA
##sequence-region NZ_CAAR01000059.1 1 3363
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000059.1	RefSeq	region	1	3363	.	+	.	ID=NZ_CAAR01000059.1:1..3363;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000059.1	RefSeq	gene	121	3147	.	+	.	ID=gene-STY7866_RS01975;Name=STY7866_RS01975;gbkey=Gene;gene_biotype=rRNA;locus_tag=STY7866_RS01975
NZ_CAAR01000059.1	RefSeq	rRNA	121	3147	.	+	.	ID=rna-STY7866_RS01975;Parent=gene-STY7866_RS01975;gbkey=rRNA;locus_tag=STY7866_RS01975;product=23S ribosomal RNA
NZ_CAAR01000059.1	RefSeq	exon	121	3147	.	+	.	ID=exon-STY7866_RS01975-1;Parent=rna-STY7866_RS01975;gbkey=rRNA;locus_tag=STY7866_RS01975;product=23S ribosomal RNA
NZ_CAAR01000059.1	RefSeq	gene	3238	3353	.	+	.	ID=gene-STY7866_RS01980;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=STY7866_RS01980
NZ_CAAR01000059.1	cmsearch	rRNA	3238	3353	.	+	.	ID=rna-STY7866_RS01980;Parent=gene-STY7866_RS01980;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS01980;product=5S ribosomal RNA
NZ_CAAR01000059.1	cmsearch	exon	3238	3353	.	+	.	ID=exon-STY7866_RS01980-1;Parent=rna-STY7866_RS01980;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS01980;product=5S ribosomal RNA
##sequence-region NZ_CAAR01000058.1 1 8761
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000058.1	RefSeq	region	1	8761	.	+	.	ID=NZ_CAAR01000058.1:1..8761;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000058.1	RefSeq	gene	7	2508	.	-	.	ID=gene-STY7866_RS01925;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=STY7866_RS01925
NZ_CAAR01000058.1	Protein Homology	CDS	7	2508	.	-	0	ID=cds-WP_000083904.1;Parent=gene-STY7866_RS01925;Dbxref=Genbank:WP_000083904.1;Name=WP_000083904.1;gbkey=CDS;gene=copA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455093.1;locus_tag=STY7866_RS01925;product=copper-exporting P-type ATPase CopA;protein_id=WP_000083904.1;transl_table=11
NZ_CAAR01000058.1	RefSeq	gene	2618	3034	.	+	.	ID=gene-STY7866_RS01930;Name=STY7866_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01930
NZ_CAAR01000058.1	Protein Homology	CDS	2618	3034	.	+	0	ID=cds-WP_001026762.1;Parent=gene-STY7866_RS01930;Dbxref=Genbank:WP_001026762.1;Name=WP_001026762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455094.1;locus_tag=STY7866_RS01930;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026762.1;transl_table=11
NZ_CAAR01000058.1	RefSeq	gene	3035	3487	.	-	.	ID=gene-STY7866_RS01935;Name=STY7866_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01935
NZ_CAAR01000058.1	Protein Homology	CDS	3035	3487	.	-	0	ID=cds-WP_000561177.1;Parent=gene-STY7866_RS01935;Dbxref=Genbank:WP_000561177.1;Name=WP_000561177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455095.1;locus_tag=STY7866_RS01935;product=NfeD family protein;protein_id=WP_000561177.1;transl_table=11
NZ_CAAR01000058.1	RefSeq	gene	3484	4401	.	-	.	ID=gene-STY7866_RS01940;Name=STY7866_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01940
NZ_CAAR01000058.1	Protein Homology	CDS	3484	4401	.	-	0	ID=cds-WP_000906145.1;Parent=gene-STY7866_RS01940;Dbxref=Genbank:WP_000906145.1;Name=WP_000906145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455096.1;locus_tag=STY7866_RS01940;product=SPFH/Band 7/PHB domain protein;protein_id=WP_000906145.1;transl_table=11
NZ_CAAR01000058.1	RefSeq	gene	4548	5225	.	+	.	ID=gene-STY7866_RS01945;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;locus_tag=STY7866_RS01945
NZ_CAAR01000058.1	Protein Homology	CDS	4548	5225	.	+	0	ID=cds-WP_000166987.1;Parent=gene-STY7866_RS01945;Dbxref=Genbank:WP_000166987.1;Name=WP_000166987.1;gbkey=CDS;gene=fetA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455097.1;locus_tag=STY7866_RS01945;product=iron ABC transporter ATP-binding protein FetA;protein_id=WP_000166987.1;transl_table=11
NZ_CAAR01000058.1	RefSeq	gene	5212	5991	.	+	.	ID=gene-STY7866_RS01950;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=STY7866_RS01950
NZ_CAAR01000058.1	Protein Homology	CDS	5212	5991	.	+	0	ID=cds-WP_001002130.1;Parent=gene-STY7866_RS01950;Dbxref=Genbank:WP_001002130.1;Name=WP_001002130.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455098.1;locus_tag=STY7866_RS01950;product=iron export ABC transporter permease subunit FetB;protein_id=WP_001002130.1;transl_table=11
NZ_CAAR01000058.1	RefSeq	gene	6077	6931	.	-	.	ID=gene-STY7866_RS01955;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=STY7866_RS01955
NZ_CAAR01000058.1	Protein Homology	CDS	6077	6931	.	-	0	ID=cds-WP_000116065.1;Parent=gene-STY7866_RS01955;Dbxref=Genbank:WP_000116065.1;Name=WP_000116065.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455099.1;locus_tag=STY7866_RS01955;product=chaperedoxin;protein_id=WP_000116065.1;transl_table=11
NZ_CAAR01000058.1	RefSeq	gene	6991	7761	.	-	.	ID=gene-STY7866_RS01960;Name=STY7866_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01960
NZ_CAAR01000058.1	Protein Homology	CDS	6991	7761	.	-	0	ID=cds-WP_001172802.1;Parent=gene-STY7866_RS01960;Dbxref=Genbank:WP_001172802.1;Name=WP_001172802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455100.1;locus_tag=STY7866_RS01960;product=SDR family oxidoreductase;protein_id=WP_001172802.1;transl_table=11
NZ_CAAR01000058.1	RefSeq	gene	7916	8530	.	-	.	ID=gene-STY7866_RS01965;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=STY7866_RS01965
NZ_CAAR01000058.1	Protein Homology	CDS	7916	8530	.	-	0	ID=cds-WP_001010578.1;Parent=gene-STY7866_RS01965;Dbxref=Genbank:WP_001010578.1;Name=WP_001010578.1;gbkey=CDS;gene=tesA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455101.1;locus_tag=STY7866_RS01965;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001010578.1;transl_table=11
NZ_CAAR01000058.1	RefSeq	gene	8501	8761	.	+	.	ID=gene-STY7866_RS01970;Name=STY7866_RS01970;end_range=8761,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01970;partial=true
NZ_CAAR01000058.1	Protein Homology	CDS	8501	8761	.	+	0	ID=cds-WP_001110592.1;Parent=gene-STY7866_RS01970;Dbxref=Genbank:WP_001110592.1;Name=WP_001110592.1;end_range=8761,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455102.1;locus_tag=STY7866_RS01970;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_001110592.1;transl_table=11
##sequence-region NZ_CAAR01000057.1 1 3485
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000057.1	RefSeq	region	1	3485	.	+	.	ID=NZ_CAAR01000057.1:1..3485;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000057.1	RefSeq	pseudogene	438	1212	.	+	.	ID=gene-STY7866_RS26365;Name=STY7866_RS26365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26365;pseudo=true
NZ_CAAR01000057.1	Protein Homology	CDS	438	1212	.	+	0	ID=cds-STY7866_RS26365;Parent=gene-STY7866_RS26365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001759369.1;locus_tag=STY7866_RS26365;product=reverse transcriptase;pseudo=true;transl_table=11
NZ_CAAR01000057.1	RefSeq	gene	1321	1683	.	-	.	ID=gene-STY7866_RS26785;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=STY7866_RS26785
NZ_CAAR01000057.1	cmsearch	tmRNA	1321	1683	.	-	.	ID=rna-STY7866_RS26785;Parent=gene-STY7866_RS26785;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS26785;product=transfer-messenger RNA
NZ_CAAR01000057.1	cmsearch	exon	1321	1683	.	-	.	ID=exon-STY7866_RS26785-1;Parent=rna-STY7866_RS26785;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=STY7866_RS26785;product=transfer-messenger RNA
NZ_CAAR01000057.1	RefSeq	pseudogene	1755	2917	.	-	.	ID=gene-STY7866_RS01915;Name=STY7866_RS01915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS01915;pseudo=true
NZ_CAAR01000057.1	Protein Homology	CDS	1755	2917	.	-	0	ID=cds-STY7866_RS01915;Parent=gene-STY7866_RS01915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457161.1;locus_tag=STY7866_RS01915;product=HlyD family type I secretion periplasmic adaptor subunit;pseudo=true;transl_table=11
NZ_CAAR01000057.1	RefSeq	gene	2925	3485	.	-	.	ID=gene-STY7866_RS01920;Name=STY7866_RS01920;end_range=3485,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01920;partial=true
NZ_CAAR01000057.1	Protein Homology	CDS	2925	3485	.	-	0	ID=cds-WP_001763850.1;Parent=gene-STY7866_RS01920;Dbxref=Genbank:WP_001763850.1;Name=WP_001763850.1;end_range=3485,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=STY7866_RS01920;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_001763850.1;transl_table=11
##sequence-region NZ_CAAR01000056.1 1 1472
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000056.1	RefSeq	region	1	1472	.	+	.	ID=NZ_CAAR01000056.1:1..1472;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000056.1	RefSeq	pseudogene	27	1349	.	-	.	ID=gene-STY7866_RS01900;Name=STY7866_RS01900;end_range=1349,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS01900;partial=true;pseudo=true
NZ_CAAR01000056.1	Protein Homology	CDS	27	1349	.	-	0	ID=cds-STY7866_RS01900;Parent=gene-STY7866_RS01900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1349,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=STY7866_RS01900;partial=true;product=YifB family Mg chelatase-like AAA ATPase;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000055.1 1 5647
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000055.1	RefSeq	region	1	5647	.	+	.	ID=NZ_CAAR01000055.1:1..5647;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000055.1	RefSeq	pseudogene	72	1026	.	-	.	ID=gene-STY7866_RS01875;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=pseudogene;locus_tag=STY7866_RS01875;pseudo=true
NZ_CAAR01000055.1	Protein Homology	CDS	72	1026	.	-	0	ID=cds-STY7866_RS01875;Parent=gene-STY7866_RS01875;Note=frameshifted;gbkey=CDS;gene=flgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455677.1;locus_tag=STY7866_RS01875;product=flagellar hook-filament junction protein FlgL;pseudo=true;transl_table=11
NZ_CAAR01000055.1	RefSeq	gene	1041	2702	.	-	.	ID=gene-STY7866_RS01880;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=STY7866_RS01880
NZ_CAAR01000055.1	Protein Homology	CDS	1041	2702	.	-	0	ID=cds-WP_000096425.1;Parent=gene-STY7866_RS01880;Dbxref=Genbank:WP_000096425.1;Name=WP_000096425.1;gbkey=CDS;gene=flgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455676.1;locus_tag=STY7866_RS01880;product=flagellar hook-associated protein FlgK;protein_id=WP_000096425.1;transl_table=11
NZ_CAAR01000055.1	RefSeq	gene	2767	3717	.	-	.	ID=gene-STY7866_RS01885;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=STY7866_RS01885
NZ_CAAR01000055.1	Protein Homology	CDS	2767	3717	.	-	0	ID=cds-WP_000578683.1;Parent=gene-STY7866_RS01885;Dbxref=Genbank:WP_000578683.1;Name=WP_000578683.1;gbkey=CDS;gene=flgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455675.1;locus_tag=STY7866_RS01885;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_000578683.1;transl_table=11
NZ_CAAR01000055.1	RefSeq	gene	3717	4814	.	-	.	ID=gene-STY7866_RS01890;Name=STY7866_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01890
NZ_CAAR01000055.1	Protein Homology	CDS	3717	4814	.	-	0	ID=cds-WP_001518955.1;Parent=gene-STY7866_RS01890;Dbxref=Genbank:WP_001518955.1;Name=WP_001518955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=STY7866_RS01890;product=flagellar basal body P-ring protein FlgI;protein_id=WP_001518955.1;transl_table=11
NZ_CAAR01000055.1	RefSeq	gene	4826	5524	.	-	.	ID=gene-STY7866_RS01895;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=STY7866_RS01895
NZ_CAAR01000055.1	Protein Homology	CDS	4826	5524	.	-	0	ID=cds-WP_001174897.1;Parent=gene-STY7866_RS01895;Dbxref=Genbank:WP_001174897.1;Name=WP_001174897.1;gbkey=CDS;gene=flgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455673.1;locus_tag=STY7866_RS01895;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001174897.1;transl_table=11
NZ_CAAR01000055.1	RefSeq	pseudogene	5579	5647	.	-	.	ID=gene-STY7866_RS26780;Name=STY7866_RS26780;end_range=5647,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26780;partial=true;pseudo=true
NZ_CAAR01000055.1	Protein Homology	CDS	5579	5647	.	-	0	ID=cds-STY7866_RS26780;Parent=gene-STY7866_RS26780;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5647,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309483.1;locus_tag=STY7866_RS26780;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000054.1 1 1908
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000054.1	RefSeq	region	1	1908	.	+	.	ID=NZ_CAAR01000054.1:1..1908;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000054.1	RefSeq	gene	85	591	.	-	.	ID=gene-STY7866_RS01860;Name=STY7866_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01860
NZ_CAAR01000054.1	Protein Homology	CDS	85	591	.	-	0	ID=cds-WP_000084375.1;Parent=gene-STY7866_RS01860;Dbxref=Genbank:WP_000084375.1;Name=WP_000084375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455822.1;locus_tag=STY7866_RS01860;product=thiol peroxidase;protein_id=WP_000084375.1;transl_table=11
NZ_CAAR01000054.1	RefSeq	gene	707	1672	.	+	.	ID=gene-STY7866_RS01865;Name=STY7866_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01865
NZ_CAAR01000054.1	Protein Homology	CDS	707	1672	.	+	0	ID=cds-WP_001258077.1;Parent=gene-STY7866_RS01865;Dbxref=Genbank:WP_001258077.1;Name=WP_001258077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455823.1;locus_tag=STY7866_RS01865;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001258077.1;transl_table=11
NZ_CAAR01000054.1	RefSeq	pseudogene	1647	1908	.	-	.	ID=gene-STY7866_RS01870;Name=STY7866_RS01870;end_range=1908,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS01870;partial=true;pseudo=true
NZ_CAAR01000054.1	Protein Homology	CDS	1647	1908	.	-	1	ID=cds-STY7866_RS01870;Parent=gene-STY7866_RS01870;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1908,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455824.1;locus_tag=STY7866_RS01870;partial=true;product=murein tripeptide amidase MpaA;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000053.1 1 7863
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000053.1	RefSeq	region	1	7863	.	+	.	ID=NZ_CAAR01000053.1:1..7863;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000053.1	RefSeq	gene	44	898	.	-	.	ID=gene-STY7866_RS01815;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=STY7866_RS01815
NZ_CAAR01000053.1	Protein Homology	CDS	44	898	.	-	0	ID=cds-WP_000811046.1;Parent=gene-STY7866_RS01815;Dbxref=Genbank:WP_000811046.1;Name=WP_000811046.1;gbkey=CDS;gene=kdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456282.1;locus_tag=STY7866_RS01815;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811046.1;transl_table=11
NZ_CAAR01000053.1	RefSeq	gene	936	1745	.	-	.	ID=gene-STY7866_RS01820;Name=STY7866_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01820
NZ_CAAR01000053.1	Protein Homology	CDS	936	1745	.	-	0	ID=cds-WP_001257065.1;Parent=gene-STY7866_RS01820;Dbxref=Genbank:WP_001257065.1;Name=WP_001257065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456283.1;locus_tag=STY7866_RS01820;product=tetratricopeptide repeat-containing protein;protein_id=WP_001257065.1;transl_table=11
NZ_CAAR01000053.1	RefSeq	gene	1749	2138	.	-	.	ID=gene-STY7866_RS01825;Name=STY7866_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01825
NZ_CAAR01000053.1	Protein Homology	CDS	1749	2138	.	-	0	ID=cds-WP_000150667.1;Parent=gene-STY7866_RS01825;Dbxref=Genbank:WP_000150667.1;Name=WP_000150667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456284.1;locus_tag=STY7866_RS01825;product=SirB family protein;protein_id=WP_000150667.1;transl_table=11
NZ_CAAR01000053.1	RefSeq	gene	2135	2968	.	-	.	ID=gene-STY7866_RS01830;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=STY7866_RS01830
NZ_CAAR01000053.1	Protein Homology	CDS	2135	2968	.	-	0	ID=cds-WP_000347320.1;Parent=gene-STY7866_RS01830;Dbxref=Genbank:WP_000347320.1;Name=WP_000347320.1;gbkey=CDS;gene=prmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456285.1;locus_tag=STY7866_RS01830;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000347320.1;transl_table=11
NZ_CAAR01000053.1	RefSeq	gene	2968	4050	.	-	.	ID=gene-STY7866_RS01835;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=STY7866_RS01835
NZ_CAAR01000053.1	Protein Homology	CDS	2968	4050	.	-	0	ID=cds-WP_000804703.1;Parent=gene-STY7866_RS01835;Dbxref=Genbank:WP_000804703.1;Name=WP_000804703.1;gbkey=CDS;gene=prfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=STY7866_RS01835;product=peptide chain release factor 1;protein_id=WP_000804703.1;transl_table=11
NZ_CAAR01000053.1	RefSeq	gene	4091	5347	.	-	.	ID=gene-STY7866_RS01840;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=STY7866_RS01840
NZ_CAAR01000053.1	Protein Homology	CDS	4091	5347	.	-	0	ID=cds-WP_000173208.1;Parent=gene-STY7866_RS01840;Dbxref=Genbank:WP_000173208.1;Name=WP_000173208.1;gbkey=CDS;gene=hemA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456287.1;locus_tag=STY7866_RS01840;product=glutamyl-tRNA reductase;protein_id=WP_000173208.1;transl_table=11
NZ_CAAR01000053.1	RefSeq	gene	5661	6284	.	+	.	ID=gene-STY7866_RS01845;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=STY7866_RS01845
NZ_CAAR01000053.1	Protein Homology	CDS	5661	6284	.	+	0	ID=cds-WP_000174482.1;Parent=gene-STY7866_RS01845;Dbxref=Genbank:WP_000174482.1;Name=WP_000174482.1;gbkey=CDS;gene=lolB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456288.1;locus_tag=STY7866_RS01845;product=lipoprotein localization protein LolB;protein_id=WP_000174482.1;transl_table=11
NZ_CAAR01000053.1	RefSeq	gene	6281	7132	.	+	.	ID=gene-STY7866_RS01850;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=STY7866_RS01850
NZ_CAAR01000053.1	Protein Homology	CDS	6281	7132	.	+	0	ID=cds-WP_000988253.1;Parent=gene-STY7866_RS01850;Dbxref=Genbank:WP_000988253.1;Name=WP_000988253.1;gbkey=CDS;gene=ispE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456289.1;locus_tag=STY7866_RS01850;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_000988253.1;transl_table=11
NZ_CAAR01000053.1	RefSeq	gene	7398	7863	.	+	.	ID=gene-STY7866_RS01855;Name=prs;end_range=7863,.;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=STY7866_RS01855;partial=true
NZ_CAAR01000053.1	Protein Homology	CDS	7398	7863	.	+	0	ID=cds-WP_001763848.1;Parent=gene-STY7866_RS01855;Dbxref=Genbank:WP_001763848.1;Name=WP_001763848.1;end_range=7863,.;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=STY7866_RS01855;partial=true;product=ribose-phosphate diphosphokinase;protein_id=WP_001763848.1;transl_table=11
##sequence-region NZ_CAAR01000052.1 1 6554
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000052.1	RefSeq	region	1	6554	.	+	.	ID=NZ_CAAR01000052.1:1..6554;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000052.1	RefSeq	gene	177	1223	.	+	.	ID=gene-STY7866_RS01775;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=STY7866_RS01775
NZ_CAAR01000052.1	Protein Homology	CDS	177	1223	.	+	0	ID=cds-WP_000394189.1;Parent=gene-STY7866_RS01775;Dbxref=Genbank:WP_000394189.1;Name=WP_000394189.1;gbkey=CDS;gene=ansB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457498.1;locus_tag=STY7866_RS01775;product=L-asparaginase 2;protein_id=WP_000394189.1;transl_table=11
NZ_CAAR01000052.1	RefSeq	gene	1356	2363	.	+	.	ID=gene-STY7866_RS01780;Name=STY7866_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01780
NZ_CAAR01000052.1	Protein Homology	CDS	1356	2363	.	+	0	ID=cds-WP_000252198.1;Parent=gene-STY7866_RS01780;Dbxref=Genbank:WP_000252198.1;Name=WP_000252198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457497.1;locus_tag=STY7866_RS01780;product=DUF1202 domain-containing protein;protein_id=WP_000252198.1;transl_table=11
NZ_CAAR01000052.1	RefSeq	gene	2454	3590	.	-	.	ID=gene-STY7866_RS01785;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=STY7866_RS01785
NZ_CAAR01000052.1	Protein Homology	CDS	2454	3590	.	-	0	ID=cds-WP_001096530.1;Parent=gene-STY7866_RS01785;Dbxref=Genbank:WP_001096530.1;Name=WP_001096530.1;gbkey=CDS;gene=hemW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457496.1;locus_tag=STY7866_RS01785;product=radical SAM family heme chaperone HemW;protein_id=WP_001096530.1;transl_table=11
NZ_CAAR01000052.1	RefSeq	gene	3583	4176	.	-	.	ID=gene-STY7866_RS01790;Name=STY7866_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01790
NZ_CAAR01000052.1	Protein Homology	CDS	3583	4176	.	-	0	ID=cds-WP_001174773.1;Parent=gene-STY7866_RS01790;Dbxref=Genbank:WP_001174773.1;Name=WP_001174773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457495.1;locus_tag=STY7866_RS01790;product=XTP/dITP diphosphatase;protein_id=WP_001174773.1;transl_table=11
NZ_CAAR01000052.1	RefSeq	gene	4184	4474	.	-	.	ID=gene-STY7866_RS01795;Name=STY7866_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01795
NZ_CAAR01000052.1	Protein Homology	CDS	4184	4474	.	-	0	ID=cds-WP_001277205.1;Parent=gene-STY7866_RS01795;Dbxref=Genbank:WP_001277205.1;Name=WP_001277205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457494.1;locus_tag=STY7866_RS01795;product=YggU family protein;protein_id=WP_001277205.1;transl_table=11
NZ_CAAR01000052.1	RefSeq	gene	4471	5037	.	-	.	ID=gene-STY7866_RS01800;Name=STY7866_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01800
NZ_CAAR01000052.1	Protein Homology	CDS	4471	5037	.	-	0	ID=cds-WP_001094848.1;Parent=gene-STY7866_RS01800;Dbxref=Genbank:WP_001094848.1;Name=WP_001094848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457493.1;locus_tag=STY7866_RS01800;product=YggT family protein;protein_id=WP_001094848.1;transl_table=11
NZ_CAAR01000052.1	RefSeq	gene	5056	5760	.	-	.	ID=gene-STY7866_RS01805;Name=STY7866_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01805
NZ_CAAR01000052.1	Protein Homology	CDS	5056	5760	.	-	0	ID=cds-WP_000997790.1;Parent=gene-STY7866_RS01805;Dbxref=Genbank:WP_000997790.1;Name=WP_000997790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457492.1;locus_tag=STY7866_RS01805;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_000997790.1;transl_table=11
NZ_CAAR01000052.1	RefSeq	gene	5778	6554	.	+	.	ID=gene-STY7866_RS01810;Name=STY7866_RS01810;end_range=6554,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01810;partial=true
NZ_CAAR01000052.1	Protein Homology	CDS	5778	6554	.	+	0	ID=cds-WP_001055656.1;Parent=gene-STY7866_RS01810;Dbxref=Genbank:WP_001055656.1;Name=WP_001055656.1;end_range=6554,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457491.1;locus_tag=STY7866_RS01810;partial=true;product=PilT/PilU family type 4a pilus ATPase;protein_id=WP_001055656.1;transl_table=11
##sequence-region NZ_CAAR01000051.1 1 3508
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000051.1	RefSeq	region	1	3508	.	+	.	ID=NZ_CAAR01000051.1:1..3508;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000051.1	RefSeq	gene	37	1116	.	-	.	ID=gene-STY7866_RS01755;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=STY7866_RS01755
NZ_CAAR01000051.1	Protein Homology	CDS	37	1116	.	-	0	ID=cds-WP_000034386.1;Parent=gene-STY7866_RS01755;Dbxref=Genbank:WP_000034386.1;Name=WP_000034386.1;gbkey=CDS;gene=fbaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=STY7866_RS01755;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034386.1;transl_table=11
NZ_CAAR01000051.1	RefSeq	gene	1218	2381	.	-	.	ID=gene-STY7866_RS01760;Name=STY7866_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01760
NZ_CAAR01000051.1	Protein Homology	CDS	1218	2381	.	-	0	ID=cds-WP_000111274.1;Parent=gene-STY7866_RS01760;Dbxref=Genbank:WP_000111274.1;Name=WP_000111274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457468.1;locus_tag=STY7866_RS01760;product=phosphoglycerate kinase;protein_id=WP_000111274.1;transl_table=11
NZ_CAAR01000051.1	RefSeq	gene	2403	3449	.	-	.	ID=gene-STY7866_RS01765;Name=STY7866_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01765
NZ_CAAR01000051.1	Protein Homology	CDS	2403	3449	.	-	0	ID=cds-WP_000218338.1;Parent=gene-STY7866_RS01765;Dbxref=Genbank:WP_000218338.1;Name=WP_000218338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457469.1;locus_tag=STY7866_RS01765;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218338.1;transl_table=11
##sequence-region NZ_CAAR01000050.1 1 12489
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000050.1	RefSeq	region	1	12489	.	+	.	ID=NZ_CAAR01000050.1:1..12489;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000050.1	RefSeq	pseudogene	1	212	.	+	.	ID=gene-STY7866_RS01675;Name=STY7866_RS01675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS01675;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000050.1	Protein Homology	CDS	1	212	.	+	2	ID=cds-STY7866_RS01675;Parent=gene-STY7866_RS01675;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455293.1;locus_tag=STY7866_RS01675;partial=true;product=dihydrolipoamide succinyltransferase;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000050.1	RefSeq	gene	354	1520	.	+	.	ID=gene-STY7866_RS01680;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=STY7866_RS01680
NZ_CAAR01000050.1	Protein Homology	CDS	354	1520	.	+	0	ID=cds-WP_001048590.1;Parent=gene-STY7866_RS01680;Dbxref=Genbank:WP_001048590.1;Name=WP_001048590.1;gbkey=CDS;gene=sucC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=STY7866_RS01680;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048590.1;transl_table=11
NZ_CAAR01000050.1	RefSeq	gene	1520	2389	.	+	.	ID=gene-STY7866_RS01685;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=STY7866_RS01685
NZ_CAAR01000050.1	Protein Homology	CDS	1520	2389	.	+	0	ID=cds-WP_000114639.1;Parent=gene-STY7866_RS01685;Dbxref=Genbank:WP_000114639.1;Name=WP_000114639.1;gbkey=CDS;gene=sucD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455295.1;locus_tag=STY7866_RS01685;product=succinate--CoA ligase subunit alpha;protein_id=WP_000114639.1;transl_table=11
NZ_CAAR01000050.1	RefSeq	gene	3979	5547	.	+	.	ID=gene-STY7866_RS01695;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=STY7866_RS01695
NZ_CAAR01000050.1	Protein Homology	CDS	3979	5547	.	+	0	ID=cds-WP_000884372.1;Parent=gene-STY7866_RS01695;Dbxref=Genbank:WP_000884372.1;Name=WP_000884372.1;gbkey=CDS;gene=cydA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125442.1;locus_tag=STY7866_RS01695;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884372.1;transl_table=11
NZ_CAAR01000050.1	RefSeq	gene	5563	6702	.	+	.	ID=gene-STY7866_RS01700;Name=STY7866_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01700
NZ_CAAR01000050.1	Protein Homology	CDS	5563	6702	.	+	0	ID=cds-WP_000568258.1;Parent=gene-STY7866_RS01700;Dbxref=Genbank:WP_000568258.1;Name=WP_000568258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=STY7866_RS01700;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568258.1;transl_table=11
NZ_CAAR01000050.1	RefSeq	gene	6717	6830	.	+	.	ID=gene-STY7866_RS01705;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=STY7866_RS01705
NZ_CAAR01000050.1	Protein Homology	CDS	6717	6830	.	+	0	ID=cds-WP_000270278.1;Parent=gene-STY7866_RS01705;Dbxref=Genbank:WP_000270278.1;Name=WP_000270278.1;gbkey=CDS;gene=cydX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455298.1;locus_tag=STY7866_RS01705;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270278.1;transl_table=11
NZ_CAAR01000050.1	RefSeq	gene	6967	7248	.	+	.	ID=gene-STY7866_RS01715;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=STY7866_RS01715
NZ_CAAR01000050.1	Protein Homology	CDS	6967	7248	.	+	0	ID=cds-WP_000875303.1;Parent=gene-STY7866_RS01715;Dbxref=Genbank:WP_000875303.1;Name=WP_000875303.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455299.1;locus_tag=STY7866_RS01715;product=cyd operon protein YbgE;protein_id=WP_000875303.1;transl_table=11
NZ_CAAR01000050.1	RefSeq	gene	7477	7881	.	+	.	ID=gene-STY7866_RS01720;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=STY7866_RS01720
NZ_CAAR01000050.1	Protein Homology	CDS	7477	7881	.	+	0	ID=cds-WP_001046241.1;Parent=gene-STY7866_RS01720;Dbxref=Genbank:WP_001046241.1;Name=WP_001046241.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455300.1;locus_tag=STY7866_RS01720;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001046241.1;transl_table=11
NZ_CAAR01000050.1	RefSeq	gene	7878	8570	.	+	.	ID=gene-STY7866_RS01725;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=STY7866_RS01725
NZ_CAAR01000050.1	Protein Homology	CDS	7878	8570	.	+	0	ID=cds-WP_000131318.1;Parent=gene-STY7866_RS01725;Dbxref=Genbank:WP_000131318.1;Name=WP_000131318.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455301.1;locus_tag=STY7866_RS01725;product=Tol-Pal system protein TolQ;protein_id=WP_000131318.1;transl_table=11
NZ_CAAR01000050.1	RefSeq	gene	8574	9002	.	+	.	ID=gene-STY7866_RS01730;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=STY7866_RS01730
NZ_CAAR01000050.1	Protein Homology	CDS	8574	9002	.	+	0	ID=cds-WP_000124676.1;Parent=gene-STY7866_RS01730;Dbxref=Genbank:WP_000124676.1;Name=WP_000124676.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=STY7866_RS01730;product=colicin uptake protein TolR;protein_id=WP_000124676.1;transl_table=11
NZ_CAAR01000050.1	RefSeq	gene	9067	10197	.	+	.	ID=gene-STY7866_RS01735;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=STY7866_RS01735
NZ_CAAR01000050.1	Protein Homology	CDS	9067	10197	.	+	0	ID=cds-WP_000030559.1;Parent=gene-STY7866_RS01735;Dbxref=Genbank:WP_000030559.1;Name=WP_000030559.1;gbkey=CDS;gene=tolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455303.1;locus_tag=STY7866_RS01735;product=cell envelope integrity protein TolA;protein_id=WP_000030559.1;transl_table=11
NZ_CAAR01000050.1	RefSeq	gene	10321	11613	.	+	.	ID=gene-STY7866_RS01740;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=STY7866_RS01740
NZ_CAAR01000050.1	Protein Homology	CDS	10321	11613	.	+	0	ID=cds-WP_010989131.1;Parent=gene-STY7866_RS01740;Dbxref=Genbank:WP_010989131.1;Name=WP_010989131.1;gbkey=CDS;gene=tolB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=STY7866_RS01740;product=Tol-Pal system protein TolB;protein_id=WP_010989131.1;transl_table=11
NZ_CAAR01000050.1	RefSeq	gene	11648	12172	.	+	.	ID=gene-STY7866_RS01745;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=STY7866_RS01745
NZ_CAAR01000050.1	Protein Homology	CDS	11648	12172	.	+	0	ID=cds-WP_001176621.1;Parent=gene-STY7866_RS01745;Dbxref=Genbank:WP_001176621.1;Name=WP_001176621.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455305.1;locus_tag=STY7866_RS01745;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001176621.1;transl_table=11
NZ_CAAR01000050.1	RefSeq	pseudogene	12182	12476	.	+	.	ID=gene-STY7866_RS01750;Name=STY7866_RS01750;end_range=12476,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS01750;partial=true;pseudo=true
NZ_CAAR01000050.1	Protein Homology	CDS	12182	12476	.	+	0	ID=cds-STY7866_RS01750;Parent=gene-STY7866_RS01750;Note=periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=12476,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415270.1;locus_tag=STY7866_RS01750;partial=true;product=cell division protein CpoB;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000049.1 1 7782
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000049.1	RefSeq	region	1	7782	.	+	.	ID=NZ_CAAR01000049.1:1..7782;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000049.1	RefSeq	pseudogene	6	1407	.	-	.	ID=gene-STY7866_RS01645;Name=STY7866_RS01645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS01645;pseudo=true
NZ_CAAR01000049.1	Protein Homology	CDS	6	1407	.	-	0	ID=cds-STY7866_RS01645;Parent=gene-STY7866_RS01645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458119.1;locus_tag=STY7866_RS01645;product=c-type cytochrome;pseudo=true;transl_table=11
NZ_CAAR01000049.1	RefSeq	gene	1597	2229	.	-	.	ID=gene-STY7866_RS01650;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=STY7866_RS01650
NZ_CAAR01000049.1	Protein Homology	CDS	1597	2229	.	-	0	ID=cds-WP_000595416.1;Parent=gene-STY7866_RS01650;Dbxref=Genbank:WP_000595416.1;Name=WP_000595416.1;gbkey=CDS;gene=torD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458118.1;locus_tag=STY7866_RS01650;product=molecular chaperone TorD;protein_id=WP_000595416.1;transl_table=11
NZ_CAAR01000049.1	RefSeq	gene	2222	4774	.	-	.	ID=gene-STY7866_RS01655;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=STY7866_RS01655
NZ_CAAR01000049.1	Protein Homology	CDS	2222	4774	.	-	0	ID=cds-WP_000790669.1;Parent=gene-STY7866_RS01655;Dbxref=Genbank:WP_000790669.1;Name=WP_000790669.1;gbkey=CDS;gene=torA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458117.1;locus_tag=STY7866_RS01655;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_000790669.1;transl_table=11
NZ_CAAR01000049.1	RefSeq	pseudogene	4764	5947	.	-	.	ID=gene-STY7866_RS01660;Name=torC;gbkey=Gene;gene=torC;gene_biotype=pseudogene;locus_tag=STY7866_RS01660;pseudo=true
NZ_CAAR01000049.1	Protein Homology	CDS	4764	5947	.	-	0	ID=cds-STY7866_RS01660;Parent=gene-STY7866_RS01660;Note=frameshifted;gbkey=CDS;gene=torC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=STY7866_RS01660;product=pentaheme c-type cytochrome TorC;pseudo=true;transl_table=11
NZ_CAAR01000049.1	RefSeq	pseudogene	6077	6771	.	+	.	ID=gene-STY7866_RS01665;Name=torR;gbkey=Gene;gene=torR;gene_biotype=pseudogene;locus_tag=STY7866_RS01665;pseudo=true
NZ_CAAR01000049.1	Protein Homology	CDS	6077	6771	.	+	0	ID=cds-STY7866_RS01665;Parent=gene-STY7866_RS01665;Note=frameshifted;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=STY7866_RS01665;product=two-component system response regulator TorR;pseudo=true;transl_table=11
NZ_CAAR01000049.1	RefSeq	gene	6744	7754	.	-	.	ID=gene-STY7866_RS01670;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=STY7866_RS01670
NZ_CAAR01000049.1	Protein Homology	CDS	6744	7754	.	-	0	ID=cds-WP_024151017.1;Parent=gene-STY7866_RS01670;Dbxref=Genbank:WP_024151017.1;Name=WP_024151017.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001680110.1;locus_tag=STY7866_RS01670;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_024151017.1;transl_table=11
##sequence-region NZ_CAAR01000048.1 1 14507
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000048.1	RefSeq	region	1	14507	.	+	.	ID=NZ_CAAR01000048.1:1..14507;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000048.1	RefSeq	gene	1	365	.	+	.	ID=gene-STY7866_RS26360;Name=STY7866_RS26360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26360;partial=true;start_range=.,1
NZ_CAAR01000048.1	Protein Homology	CDS	1	365	.	+	2	ID=cds-WP_000329738.1;Parent=gene-STY7866_RS26360;Dbxref=Genbank:WP_000329738.1;Name=WP_000329738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=STY7866_RS26360;partial=true;product=TonB-dependent receptor;protein_id=WP_000329738.1;start_range=.,1;transl_table=11
NZ_CAAR01000048.1	RefSeq	gene	414	1211	.	+	.	ID=gene-STY7866_RS01580;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=STY7866_RS01580
NZ_CAAR01000048.1	Protein Homology	CDS	414	1211	.	+	0	ID=cds-WP_001157197.1;Parent=gene-STY7866_RS01580;Dbxref=Genbank:WP_001157197.1;Name=WP_001157197.1;gbkey=CDS;gene=fhuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454807.1;locus_tag=STY7866_RS01580;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001157197.1;transl_table=11
NZ_CAAR01000048.1	RefSeq	gene	1211	2101	.	+	.	ID=gene-STY7866_RS01585;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=STY7866_RS01585
NZ_CAAR01000048.1	Protein Homology	CDS	1211	2101	.	+	0	ID=cds-WP_001208784.1;Parent=gene-STY7866_RS01585;Dbxref=Genbank:WP_001208784.1;Name=WP_001208784.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454808.1;locus_tag=STY7866_RS01585;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_001208784.1;transl_table=11
NZ_CAAR01000048.1	RefSeq	gene	2116	4155	.	+	.	ID=gene-STY7866_RS01590;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=STY7866_RS01590
NZ_CAAR01000048.1	Protein Homology	CDS	2116	4155	.	+	0	ID=cds-WP_094516706.1;Parent=gene-STY7866_RS01590;Dbxref=Genbank:WP_094516706.1;Name=WP_094516706.1;gbkey=CDS;gene=fhuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=STY7866_RS01590;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_094516706.1;transl_table=11
NZ_CAAR01000048.1	RefSeq	gene	4246	5526	.	-	.	ID=gene-STY7866_RS01595;Name=STY7866_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01595
NZ_CAAR01000048.1	Protein Homology	CDS	4246	5526	.	-	0	ID=cds-WP_000045264.1;Parent=gene-STY7866_RS01595;Dbxref=Genbank:WP_000045264.1;Name=WP_000045264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=STY7866_RS01595;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045264.1;transl_table=11
NZ_CAAR01000048.1	RefSeq	gene	5696	7117	.	+	.	ID=gene-STY7866_RS01600;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=STY7866_RS01600
NZ_CAAR01000048.1	Protein Homology	CDS	5696	7117	.	+	0	ID=cds-WP_000845433.1;Parent=gene-STY7866_RS01600;Dbxref=Genbank:WP_000845433.1;Name=WP_000845433.1;gbkey=CDS;gene=clcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454811.1;locus_tag=STY7866_RS01600;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845433.1;transl_table=11
NZ_CAAR01000048.1	RefSeq	gene	7197	7541	.	+	.	ID=gene-STY7866_RS01605;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=STY7866_RS01605
NZ_CAAR01000048.1	Protein Homology	CDS	7197	7541	.	+	0	ID=cds-WP_001278668.1;Parent=gene-STY7866_RS01605;Dbxref=Genbank:WP_001278668.1;Name=WP_001278668.1;gbkey=CDS;gene=erpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=STY7866_RS01605;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001278668.1;transl_table=11
NZ_CAAR01000048.1	RefSeq	gene	7642	8265	.	-	.	ID=gene-STY7866_RS01610;Name=STY7866_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01610
NZ_CAAR01000048.1	Protein Homology	CDS	7642	8265	.	-	0	ID=cds-WP_000964234.1;Parent=gene-STY7866_RS01610;Dbxref=Genbank:WP_000964234.1;Name=WP_000964234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454813.1;locus_tag=STY7866_RS01610;product=TRIC cation channel family protein;protein_id=WP_000964234.1;transl_table=11
NZ_CAAR01000048.1	RefSeq	gene	8302	9102	.	-	.	ID=gene-STY7866_RS01615;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=STY7866_RS01615
NZ_CAAR01000048.1	Protein Homology	CDS	8302	9102	.	-	0	ID=cds-WP_001118833.1;Parent=gene-STY7866_RS01615;Dbxref=Genbank:WP_001118833.1;Name=WP_001118833.1;gbkey=CDS;gene=btuF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454814.1;locus_tag=STY7866_RS01615;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001118833.1;transl_table=11
NZ_CAAR01000048.1	RefSeq	gene	9095	9793	.	-	.	ID=gene-STY7866_RS01620;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=STY7866_RS01620
NZ_CAAR01000048.1	Protein Homology	CDS	9095	9793	.	-	0	ID=cds-WP_000689821.1;Parent=gene-STY7866_RS01620;Dbxref=Genbank:WP_000689821.1;Name=WP_000689821.1;gbkey=CDS;gene=mtnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454815.1;locus_tag=STY7866_RS01620;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689821.1;transl_table=11
NZ_CAAR01000048.1	RefSeq	gene	9878	11395	.	+	.	ID=gene-STY7866_RS01625;Name=STY7866_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01625
NZ_CAAR01000048.1	Protein Homology	CDS	9878	11395	.	+	0	ID=cds-WP_000146450.1;Parent=gene-STY7866_RS01625;Dbxref=Genbank:WP_000146450.1;Name=WP_000146450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454816.1;locus_tag=STY7866_RS01625;product=dGTPase;protein_id=WP_000146450.1;transl_table=11
NZ_CAAR01000048.1	RefSeq	gene	11525	12952	.	+	.	ID=gene-STY7866_RS01630;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=STY7866_RS01630
NZ_CAAR01000048.1	Protein Homology	CDS	11525	12952	.	+	0	ID=cds-WP_000753959.1;Parent=gene-STY7866_RS01630;Dbxref=Genbank:WP_000753959.1;Name=WP_000753959.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454817.1;locus_tag=STY7866_RS01630;product=serine endoprotease DegP;protein_id=WP_000753959.1;transl_table=11
NZ_CAAR01000048.1	RefSeq	gene	13105	14262	.	+	.	ID=gene-STY7866_RS01635;Name=STY7866_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01635
NZ_CAAR01000048.1	Protein Homology	CDS	13105	14262	.	+	0	ID=cds-WP_000929458.1;Parent=gene-STY7866_RS01635;Dbxref=Genbank:WP_000929458.1;Name=WP_000929458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454818.1;locus_tag=STY7866_RS01635;product=CdaR family transcriptional regulator;protein_id=WP_000929458.1;transl_table=11
NZ_CAAR01000048.1	RefSeq	gene	14351	14507	.	-	.	ID=gene-STY7866_RS01640;Name=STY7866_RS01640;end_range=14507,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01640;partial=true
NZ_CAAR01000048.1	Protein Homology	CDS	14351	14507	.	-	1	ID=cds-WP_001763846.1;Parent=gene-STY7866_RS01640;Dbxref=Genbank:WP_001763846.1;Name=WP_001763846.1;end_range=14507,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454819.1;locus_tag=STY7866_RS01640;partial=true;product=DUF3461 family protein;protein_id=WP_001763846.1;transl_table=11
##sequence-region NZ_CAAR01000047.1 1 8889
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000047.1	RefSeq	region	1	8889	.	+	.	ID=NZ_CAAR01000047.1:1..8889;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000047.1	RefSeq	pseudogene	1	1066	.	+	.	ID=gene-STY7866_RS01535;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=pseudogene;locus_tag=STY7866_RS01535;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000047.1	Protein Homology	CDS	1	1066	.	+	1	ID=cds-STY7866_RS01535;Parent=gene-STY7866_RS01535;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458409.1;locus_tag=STY7866_RS01535;partial=true;product=intracellular growth attenuator protein IgaA;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000047.1	RefSeq	gene	1131	1799	.	+	.	ID=gene-STY7866_RS01540;Name=STY7866_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01540
NZ_CAAR01000047.1	Protein Homology	CDS	1131	1799	.	+	0	ID=cds-WP_001681571.1;Parent=gene-STY7866_RS01540;Dbxref=Genbank:WP_001681571.1;Name=WP_001681571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006893127.1;locus_tag=STY7866_RS01540;product=GMP/IMP nucleotidase;protein_id=WP_001681571.1;transl_table=11
NZ_CAAR01000047.1	RefSeq	gene	1810	2211	.	+	.	ID=gene-STY7866_RS01545;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=STY7866_RS01545
NZ_CAAR01000047.1	Protein Homology	CDS	1810	2211	.	+	0	ID=cds-WP_000660720.1;Parent=gene-STY7866_RS01545;Dbxref=Genbank:WP_000660720.1;Name=WP_000660720.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458407.1;locus_tag=STY7866_RS01545;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660720.1;transl_table=11
NZ_CAAR01000047.1	RefSeq	gene	2236	3114	.	+	.	ID=gene-STY7866_RS01550;Name=STY7866_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01550
NZ_CAAR01000047.1	Protein Homology	CDS	2236	3114	.	+	0	ID=cds-WP_001775502.1;Parent=gene-STY7866_RS01550;Dbxref=Genbank:WP_001775502.1;Name=WP_001775502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458406.1;locus_tag=STY7866_RS01550;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001775502.1;transl_table=11
NZ_CAAR01000047.1	RefSeq	gene	3225	4934	.	-	.	ID=gene-STY7866_RS01555;Name=STY7866_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01555
NZ_CAAR01000047.1	Protein Homology	CDS	3225	4934	.	-	0	ID=cds-WP_000446446.1;Parent=gene-STY7866_RS01555;Dbxref=Genbank:WP_000446446.1;Name=WP_000446446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458405.1;locus_tag=STY7866_RS01555;product=DUF4153 domain-containing protein;protein_id=WP_000446446.1;transl_table=11
NZ_CAAR01000047.1	RefSeq	gene	5314	6933	.	+	.	ID=gene-STY7866_RS01560;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=STY7866_RS01560
NZ_CAAR01000047.1	Protein Homology	CDS	5314	6933	.	+	0	ID=cds-WP_001265689.1;Parent=gene-STY7866_RS01560;Dbxref=Genbank:WP_001265689.1;Name=WP_001265689.1;gbkey=CDS;gene=pckA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458404.1;locus_tag=STY7866_RS01560;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265689.1;transl_table=11
NZ_CAAR01000047.1	RefSeq	gene	7008	8360	.	-	.	ID=gene-STY7866_RS01565;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=STY7866_RS01565
NZ_CAAR01000047.1	Protein Homology	CDS	7008	8360	.	-	0	ID=cds-WP_001253815.1;Parent=gene-STY7866_RS01565;Dbxref=Genbank:WP_001253815.1;Name=WP_001253815.1;gbkey=CDS;gene=envZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458403.1;locus_tag=STY7866_RS01565;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253815.1;transl_table=11
NZ_CAAR01000047.1	RefSeq	gene	8357	8889	.	-	.	ID=gene-STY7866_RS01570;Name=ompR;end_range=8889,.;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=STY7866_RS01570;partial=true
NZ_CAAR01000047.1	Protein Homology	CDS	8357	8889	.	-	2	ID=cds-WP_000696800.1;Parent=gene-STY7866_RS01570;Dbxref=Genbank:WP_000696800.1;Name=WP_000696800.1;end_range=8889,.;gbkey=CDS;gene=ompR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017461252.1;locus_tag=STY7866_RS01570;partial=true;product=two-component system response regulator OmpR;protein_id=WP_000696800.1;transl_table=11
##sequence-region NZ_CAAR01000046.1 1 3049
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000046.1	RefSeq	region	1	3049	.	+	.	ID=NZ_CAAR01000046.1:1..3049;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000046.1	RefSeq	gene	2	649	.	-	.	ID=gene-STY7866_RS01510;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=STY7866_RS01510
NZ_CAAR01000046.1	Protein Homology	CDS	2	649	.	-	0	ID=cds-WP_001115500.1;Parent=gene-STY7866_RS01510;Dbxref=Genbank:WP_001115500.1;Name=WP_001115500.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456791.1;locus_tag=STY7866_RS01510;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001115500.1;transl_table=11
NZ_CAAR01000046.1	RefSeq	gene	1477	1941	.	+	.	ID=gene-STY7866_RS01515;Name=STY7866_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01515
NZ_CAAR01000046.1	Protein Homology	CDS	1477	1941	.	+	0	ID=cds-WP_044790709.1;Parent=gene-STY7866_RS01515;Dbxref=Genbank:WP_044790709.1;Name=WP_044790709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724370.1;locus_tag=STY7866_RS01515;product=acyloxyacyl hydrolase;protein_id=WP_044790709.1;transl_table=11
NZ_CAAR01000046.1	RefSeq	gene	2133	2336	.	-	.	ID=gene-STY7866_RS01520;Name=STY7866_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01520
NZ_CAAR01000046.1	Protein Homology	CDS	2133	2336	.	-	0	ID=cds-WP_001653202.1;Parent=gene-STY7866_RS01520;Dbxref=Genbank:WP_001653202.1;Name=WP_001653202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456789.1;locus_tag=STY7866_RS01520;product=virulence protein MsgA;protein_id=WP_001653202.1;transl_table=11
NZ_CAAR01000046.1	RefSeq	pseudogene	2638	3049	.	+	.	ID=gene-STY7866_RS01530;Name=STY7866_RS01530;end_range=3049,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS01530;partial=true;pseudo=true
NZ_CAAR01000046.1	Protein Homology	CDS	2638	3049	.	+	0	ID=cds-STY7866_RS01530;Parent=gene-STY7866_RS01530;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3049,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461186.1;locus_tag=STY7866_RS01530;partial=true;product=phage tail protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000045.1 1 6311
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000045.1	RefSeq	region	1	6311	.	+	.	ID=NZ_CAAR01000045.1:1..6311;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000045.1	RefSeq	pseudogene	1	606	.	+	.	ID=gene-STY7866_RS01470;Name=ccmA;end_range=606,.;gbkey=Gene;gene=ccmA;gene_biotype=pseudogene;locus_tag=STY7866_RS01470;partial=true;pseudo=true
NZ_CAAR01000045.1	Protein Homology	CDS	1	606	.	+	0	ID=cds-STY7866_RS01470;Parent=gene-STY7866_RS01470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=606,.;gbkey=CDS;gene=ccmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456799.1;locus_tag=STY7866_RS01470;partial=true;product=cytochrome c biogenesis heme-transporting ATPase CcmA;pseudo=true;transl_table=11
NZ_CAAR01000045.1	RefSeq	gene	614	1273	.	+	.	ID=gene-STY7866_RS01475;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=STY7866_RS01475
NZ_CAAR01000045.1	Protein Homology	CDS	614	1273	.	+	0	ID=cds-WP_000990042.1;Parent=gene-STY7866_RS01475;Dbxref=Genbank:WP_000990042.1;Name=WP_000990042.1;gbkey=CDS;gene=ccmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456798.1;locus_tag=STY7866_RS01475;product=heme exporter protein CcmB;protein_id=WP_000990042.1;transl_table=11
NZ_CAAR01000045.1	RefSeq	gene	1325	2062	.	+	.	ID=gene-STY7866_RS01480;Name=STY7866_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01480
NZ_CAAR01000045.1	Protein Homology	CDS	1325	2062	.	+	0	ID=cds-WP_000266010.1;Parent=gene-STY7866_RS01480;Dbxref=Genbank:WP_000266010.1;Name=WP_000266010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456797.1;locus_tag=STY7866_RS01480;product=heme ABC transporter permease;protein_id=WP_000266010.1;transl_table=11
NZ_CAAR01000045.1	RefSeq	gene	2059	2271	.	+	.	ID=gene-STY7866_RS01485;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=STY7866_RS01485
NZ_CAAR01000045.1	Protein Homology	CDS	2059	2271	.	+	0	ID=cds-WP_000074110.1;Parent=gene-STY7866_RS01485;Dbxref=Genbank:WP_000074110.1;Name=WP_000074110.1;gbkey=CDS;gene=ccmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456796.1;locus_tag=STY7866_RS01485;product=heme exporter protein CcmD;protein_id=WP_000074110.1;transl_table=11
NZ_CAAR01000045.1	RefSeq	gene	2268	2747	.	+	.	ID=gene-STY7866_RS01490;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=STY7866_RS01490
NZ_CAAR01000045.1	Protein Homology	CDS	2268	2747	.	+	0	ID=cds-WP_001053607.1;Parent=gene-STY7866_RS01490;Dbxref=Genbank:WP_001053607.1;Name=WP_001053607.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456795.1;locus_tag=STY7866_RS01490;product=cytochrome c maturation protein CcmE;protein_id=WP_001053607.1;transl_table=11
NZ_CAAR01000045.1	RefSeq	gene	2744	4675	.	+	.	ID=gene-STY7866_RS01495;Name=STY7866_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01495
NZ_CAAR01000045.1	Protein Homology	CDS	2744	4675	.	+	0	ID=cds-WP_000982516.1;Parent=gene-STY7866_RS01495;Dbxref=Genbank:WP_000982516.1;Name=WP_000982516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456794.1;locus_tag=STY7866_RS01495;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_000982516.1;transl_table=11
NZ_CAAR01000045.1	RefSeq	gene	4672	5229	.	+	.	ID=gene-STY7866_RS01500;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=STY7866_RS01500
NZ_CAAR01000045.1	Protein Homology	CDS	4672	5229	.	+	0	ID=cds-WP_000828299.1;Parent=gene-STY7866_RS01500;Dbxref=Genbank:WP_000828299.1;Name=WP_000828299.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456793.1;locus_tag=STY7866_RS01500;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000828299.1;transl_table=11
NZ_CAAR01000045.1	RefSeq	gene	5226	6269	.	+	.	ID=gene-STY7866_RS01505;Name=STY7866_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01505
NZ_CAAR01000045.1	Protein Homology	CDS	5226	6269	.	+	0	ID=cds-WP_001238304.1;Parent=gene-STY7866_RS01505;Dbxref=Genbank:WP_001238304.1;Name=WP_001238304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456792.1;locus_tag=STY7866_RS01505;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_001238304.1;transl_table=11
##sequence-region NZ_CAAR01000044.1 1 1125
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000044.1	RefSeq	region	1	1125	.	+	.	ID=NZ_CAAR01000044.1:1..1125;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000044.1	RefSeq	gene	45	494	.	+	.	ID=gene-STY7866_RS01460;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=STY7866_RS01460
NZ_CAAR01000044.1	Protein Homology	CDS	45	494	.	+	0	ID=cds-WP_000835182.1;Parent=gene-STY7866_RS01460;Dbxref=Genbank:WP_000835182.1;Name=WP_000835182.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456801.1;locus_tag=STY7866_RS01460;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835182.1;transl_table=11
NZ_CAAR01000044.1	RefSeq	gene	504	1106	.	+	.	ID=gene-STY7866_RS01465;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=STY7866_RS01465
NZ_CAAR01000044.1	Protein Homology	CDS	504	1106	.	+	0	ID=cds-WP_000431773.1;Parent=gene-STY7866_RS01465;Dbxref=Genbank:WP_000431773.1;Name=WP_000431773.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456800.1;locus_tag=STY7866_RS01465;product=cytochrome c-type protein NapC;protein_id=WP_000431773.1;transl_table=11
##sequence-region NZ_CAAR01000043.1 1 13721
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000043.1	RefSeq	region	1	13721	.	+	.	ID=NZ_CAAR01000043.1:1..13721;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000043.1	RefSeq	gene	182	1138	.	+	.	ID=gene-STY7866_RS01410;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=STY7866_RS01410
NZ_CAAR01000043.1	Protein Homology	CDS	182	1138	.	+	0	ID=cds-WP_001239614.1;Parent=gene-STY7866_RS01410;Dbxref=Genbank:WP_001239614.1;Name=WP_001239614.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455170.1;locus_tag=STY7866_RS01410;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001239614.1;transl_table=11
NZ_CAAR01000043.1	RefSeq	gene	1201	2445	.	-	.	ID=gene-STY7866_RS01415;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=STY7866_RS01415
NZ_CAAR01000043.1	Protein Homology	CDS	1201	2445	.	-	0	ID=cds-WP_001081657.1;Parent=gene-STY7866_RS01415;Dbxref=Genbank:WP_001081657.1;Name=WP_001081657.1;gbkey=CDS;gene=entS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455169.1;locus_tag=STY7866_RS01415;product=enterobactin transporter EntS;protein_id=WP_001081657.1;transl_table=11
NZ_CAAR01000043.1	RefSeq	gene	2556	3563	.	+	.	ID=gene-STY7866_RS01420;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=STY7866_RS01420
NZ_CAAR01000043.1	Protein Homology	CDS	2556	3563	.	+	0	ID=cds-WP_001277880.1;Parent=gene-STY7866_RS01420;Dbxref=Genbank:WP_001277880.1;Name=WP_001277880.1;gbkey=CDS;gene=fepD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455168.1;locus_tag=STY7866_RS01420;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001277880.1;transl_table=11
NZ_CAAR01000043.1	RefSeq	gene	3563	4552	.	+	.	ID=gene-STY7866_RS01425;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=STY7866_RS01425
NZ_CAAR01000043.1	Protein Homology	CDS	3563	4552	.	+	0	ID=cds-WP_000480067.1;Parent=gene-STY7866_RS01425;Dbxref=Genbank:WP_000480067.1;Name=WP_000480067.1;gbkey=CDS;gene=fepG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455167.1;locus_tag=STY7866_RS01425;product=iron-enterobactin ABC transporter permease;protein_id=WP_000480067.1;transl_table=11
NZ_CAAR01000043.1	RefSeq	gene	4549	5343	.	+	.	ID=gene-STY7866_RS01430;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=STY7866_RS01430
NZ_CAAR01000043.1	Protein Homology	CDS	4549	5343	.	+	0	ID=cds-WP_000140620.1;Parent=gene-STY7866_RS01430;Dbxref=Genbank:WP_000140620.1;Name=WP_000140620.1;gbkey=CDS;gene=fepC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455166.1;locus_tag=STY7866_RS01430;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140620.1;transl_table=11
NZ_CAAR01000043.1	RefSeq	pseudogene	5396	6532	.	-	.	ID=gene-STY7866_RS01435;Name=fepE;gbkey=Gene;gene=fepE;gene_biotype=pseudogene;locus_tag=STY7866_RS01435;pseudo=true
NZ_CAAR01000043.1	Protein Homology	CDS	5396	6532	.	-	0	ID=cds-STY7866_RS01435;Parent=gene-STY7866_RS01435;Note=internal stop;gbkey=CDS;gene=fepE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=STY7866_RS01435;product=LPS O-antigen length regulator;pseudo=true;transl_table=11
NZ_CAAR01000043.1	RefSeq	pseudogene	6782	10665	.	-	.	ID=gene-STY7866_RS01440;Name=entF;gbkey=Gene;gene=entF;gene_biotype=pseudogene;locus_tag=STY7866_RS01440;pseudo=true
NZ_CAAR01000043.1	Protein Homology	CDS	6782	10665	.	-	0	ID=cds-STY7866_RS01440;Parent=gene-STY7866_RS01440;Note=frameshifted;gbkey=CDS;gene=entF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455165.1;locus_tag=STY7866_RS01440;product=enterobactin non-ribosomal peptide synthetase EntF;pseudo=true;transl_table=11
NZ_CAAR01000043.1	RefSeq	gene	10662	10880	.	-	.	ID=gene-STY7866_RS01445;Name=STY7866_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01445
NZ_CAAR01000043.1	Protein Homology	CDS	10662	10880	.	-	0	ID=cds-WP_000396011.1;Parent=gene-STY7866_RS01445;Dbxref=Genbank:WP_000396011.1;Name=WP_000396011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455164.1;locus_tag=STY7866_RS01445;product=MbtH family protein;protein_id=WP_000396011.1;transl_table=11
NZ_CAAR01000043.1	RefSeq	gene	10911	12125	.	-	.	ID=gene-STY7866_RS01450;Name=STY7866_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01450
NZ_CAAR01000043.1	Protein Homology	CDS	10911	12125	.	-	0	ID=cds-WP_000656592.1;Parent=gene-STY7866_RS01450;Dbxref=Genbank:WP_000656592.1;Name=WP_000656592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455163.1;locus_tag=STY7866_RS01450;product=enterochelin esterase;protein_id=WP_000656592.1;transl_table=11
NZ_CAAR01000043.1	RefSeq	pseudogene	12314	13721	.	+	.	ID=gene-STY7866_RS01455;Name=STY7866_RS01455;end_range=13721,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS01455;partial=true;pseudo=true
NZ_CAAR01000043.1	Protein Homology	CDS	12314	13721	.	+	0	ID=cds-STY7866_RS01455;Parent=gene-STY7866_RS01455;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=13721,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455162.1;locus_tag=STY7866_RS01455;partial=true;product=TonB-dependent siderophore receptor;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000042.1 1 42247
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000042.1	RefSeq	region	1	42247	.	+	.	ID=NZ_CAAR01000042.1:1..42247;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000042.1	RefSeq	gene	1	199	.	-	.	ID=gene-STY7866_RS01175;Name=STY7866_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01175;partial=true;start_range=.,1
NZ_CAAR01000042.1	Protein Homology	CDS	1	199	.	-	0	ID=cds-WP_001244217.1;Parent=gene-STY7866_RS01175;Dbxref=Genbank:WP_001244217.1;Name=WP_001244217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457856.1;locus_tag=STY7866_RS01175;partial=true;product=DUF2732 domain-containing protein;protein_id=WP_001244217.1;start_range=.,1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	267	608	.	-	.	ID=gene-STY7866_RS01180;Name=STY7866_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01180
NZ_CAAR01000042.1	Protein Homology	CDS	267	608	.	-	0	ID=cds-WP_000996717.1;Parent=gene-STY7866_RS01180;Dbxref=Genbank:WP_000996717.1;Name=WP_000996717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457855.1;locus_tag=STY7866_RS01180;product=DUF5347 domain-containing protein;protein_id=WP_000996717.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	725	1021	.	-	.	ID=gene-STY7866_RS26765;Name=STY7866_RS26765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26765
NZ_CAAR01000042.1	Protein Homology	CDS	725	1021	.	-	0	ID=cds-WP_000956176.1;Parent=gene-STY7866_RS26765;Dbxref=Genbank:WP_000956176.1;Name=WP_000956176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000956176.1;locus_tag=STY7866_RS26765;product=DUF2724 domain-containing protein;protein_id=WP_000956176.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	1029	1538	.	-	.	ID=gene-STY7866_RS01190;Name=STY7866_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01190
NZ_CAAR01000042.1	Protein Homology	CDS	1029	1538	.	-	0	ID=cds-WP_000460893.1;Parent=gene-STY7866_RS01190;Dbxref=Genbank:WP_000460893.1;Name=WP_000460893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457853.1;locus_tag=STY7866_RS01190;product=phage regulatory CII family protein;protein_id=WP_000460893.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	1571	1792	.	-	.	ID=gene-STY7866_RS01195;Name=STY7866_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01195
NZ_CAAR01000042.1	Protein Homology	CDS	1571	1792	.	-	0	ID=cds-WP_001247706.1;Parent=gene-STY7866_RS01195;Dbxref=Genbank:WP_001247706.1;Name=WP_001247706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457852.1;locus_tag=STY7866_RS01195;product=hypothetical protein;protein_id=WP_001247706.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	1958	2488	.	+	.	ID=gene-STY7866_RS01200;Name=STY7866_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01200
NZ_CAAR01000042.1	Protein Homology	CDS	1958	2488	.	+	0	ID=cds-WP_000228900.1;Parent=gene-STY7866_RS01200;Dbxref=Genbank:WP_000228900.1;Name=WP_000228900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001346406.1;locus_tag=STY7866_RS01200;product=phage repressor protein CI;protein_id=WP_000228900.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	2504	2719	.	+	.	ID=gene-STY7866_RS01205;Name=STY7866_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01205
NZ_CAAR01000042.1	Protein Homology	CDS	2504	2719	.	+	0	ID=cds-WP_024151016.1;Parent=gene-STY7866_RS01205;Dbxref=Genbank:WP_024151016.1;Name=WP_024151016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001350185.1;locus_tag=STY7866_RS01205;product=hypothetical protein;protein_id=WP_024151016.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	2883	3935	.	+	.	ID=gene-STY7866_RS01210;Name=STY7866_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01210
NZ_CAAR01000042.1	Protein Homology	CDS	2883	3935	.	+	0	ID=cds-WP_000290950.1;Parent=gene-STY7866_RS01210;Dbxref=Genbank:WP_000290950.1;Name=WP_000290950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457849.1;locus_tag=STY7866_RS01210;product=tyrosine-type recombinase/integrase;protein_id=WP_000290950.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	pseudogene	4009	4209	.	-	.	ID=gene-STY7866_RS01215;Name=STY7866_RS01215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS01215;partial=true;pseudo=true;start_range=.,4009
NZ_CAAR01000042.1	Protein Homology	CDS	4009	4209	.	-	0	ID=cds-STY7866_RS01215;Parent=gene-STY7866_RS01215;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=STY7866_RS01215;partial=true;product=magnesium chelatase;pseudo=true;start_range=.,4009;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	4561	4659	.	+	.	ID=gene-STY7866_RS01220;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=STY7866_RS01220
NZ_CAAR01000042.1	Protein Homology	CDS	4561	4659	.	+	0	ID=cds-WP_001311244.1;Parent=gene-STY7866_RS01220;Dbxref=Genbank:WP_001311244.1;Name=WP_001311244.1;gbkey=CDS;gene=ilvL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=STY7866_RS01220;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	4799	6445	.	+	.	ID=gene-STY7866_RS01225;Name=STY7866_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01225
NZ_CAAR01000042.1	Protein Homology	CDS	4799	6445	.	+	0	ID=cds-WP_001012560.1;Parent=gene-STY7866_RS01225;Dbxref=Genbank:WP_001012560.1;Name=WP_001012560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=STY7866_RS01225;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012560.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	6442	6705	.	+	.	ID=gene-STY7866_RS01230;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=STY7866_RS01230
NZ_CAAR01000042.1	Protein Homology	CDS	6442	6705	.	+	0	ID=cds-WP_000983260.1;Parent=gene-STY7866_RS01230;Dbxref=Genbank:WP_000983260.1;Name=WP_000983260.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=STY7866_RS01230;product=acetolactate synthase 2 small subunit;protein_id=WP_000983260.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	6723	7652	.	+	.	ID=gene-STY7866_RS01235;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=STY7866_RS01235
NZ_CAAR01000042.1	Protein Homology	CDS	6723	7652	.	+	0	ID=cds-WP_000208529.1;Parent=gene-STY7866_RS01235;Dbxref=Genbank:WP_000208529.1;Name=WP_000208529.1;gbkey=CDS;gene=ilvE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457845.1;locus_tag=STY7866_RS01235;product=branched-chain-amino-acid transaminase;protein_id=WP_000208529.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	7809	9659	.	+	.	ID=gene-STY7866_RS01240;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=STY7866_RS01240
NZ_CAAR01000042.1	Protein Homology	CDS	7809	9659	.	+	0	ID=cds-WP_001127449.1;Parent=gene-STY7866_RS01240;Dbxref=Genbank:WP_001127449.1;Name=WP_001127449.1;gbkey=CDS;gene=ilvD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=STY7866_RS01240;product=dihydroxy-acid dehydratase;protein_id=WP_001127449.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	9662	11206	.	+	.	ID=gene-STY7866_RS01245;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=STY7866_RS01245
NZ_CAAR01000042.1	Protein Homology	CDS	9662	11206	.	+	0	ID=cds-WP_010989250.1;Parent=gene-STY7866_RS01245;Dbxref=Genbank:WP_010989250.1;Name=WP_010989250.1;gbkey=CDS;gene=ilvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457843.1;locus_tag=STY7866_RS01245;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_010989250.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	11444	11806	.	+	.	ID=gene-STY7866_RS01250;Name=STY7866_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01250
NZ_CAAR01000042.1	Protein Homology	CDS	11444	11806	.	+	0	ID=cds-WP_001779357.1;Parent=gene-STY7866_RS01250;Dbxref=Genbank:WP_001779357.1;Name=WP_001779357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457842.1;locus_tag=STY7866_RS01250;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001779357.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	11803	12144	.	+	.	ID=gene-STY7866_RS01255;Name=STY7866_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01255
NZ_CAAR01000042.1	Protein Homology	CDS	11803	12144	.	+	0	ID=cds-WP_000560819.1;Parent=gene-STY7866_RS01255;Dbxref=Genbank:WP_000560819.1;Name=WP_000560819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457841.1;locus_tag=STY7866_RS01255;product=XRE family transcriptional regulator;protein_id=WP_000560819.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	12147	13034	.	-	.	ID=gene-STY7866_RS01260;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=STY7866_RS01260
NZ_CAAR01000042.1	Protein Homology	CDS	12147	13034	.	-	0	ID=cds-WP_000365798.1;Parent=gene-STY7866_RS01260;Dbxref=Genbank:WP_000365798.1;Name=WP_000365798.1;gbkey=CDS;gene=ilvY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457840.1;locus_tag=STY7866_RS01260;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365798.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	13199	14674	.	+	.	ID=gene-STY7866_RS01265;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=STY7866_RS01265
NZ_CAAR01000042.1	Protein Homology	CDS	13199	14674	.	+	0	ID=cds-WP_000024943.1;Parent=gene-STY7866_RS01265;Dbxref=Genbank:WP_000024943.1;Name=WP_000024943.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=STY7866_RS01265;product=ketol-acid reductoisomerase;protein_id=WP_000024943.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	14766	15047	.	-	.	ID=gene-STY7866_RS01270;Name=STY7866_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01270
NZ_CAAR01000042.1	Protein Homology	CDS	14766	15047	.	-	0	ID=cds-WP_001096806.1;Parent=gene-STY7866_RS01270;Dbxref=Genbank:WP_001096806.1;Name=WP_001096806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457838.1;locus_tag=STY7866_RS01270;product=peptidylprolyl isomerase PpiC;protein_id=WP_001096806.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	pseudogene	15241	15942	.	+	.	ID=gene-STY7866_RS01275;Name=STY7866_RS01275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS01275;pseudo=true
NZ_CAAR01000042.1	Protein Homology	CDS	15241	15942	.	+	0	ID=cds-STY7866_RS01275;Parent=gene-STY7866_RS01275;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004127355.1;locus_tag=STY7866_RS01275;product=Crp/Fnr family transcriptional regulator;pseudo=true;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	15970	16713	.	+	.	ID=gene-STY7866_RS01280;Name=STY7866_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01280
NZ_CAAR01000042.1	Protein Homology	CDS	15970	16713	.	+	0	ID=cds-WP_001182428.1;Parent=gene-STY7866_RS01280;Dbxref=Genbank:WP_001182428.1;Name=WP_001182428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457836.1;locus_tag=STY7866_RS01280;product=nucleoside phosphorylase;protein_id=WP_001182428.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	pseudogene	16713	17122	.	+	.	ID=gene-STY7866_RS26770;Name=STY7866_RS26770;end_range=17122,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26770;partial=true;pseudo=true
NZ_CAAR01000042.1	Protein Homology	CDS	16713	17122	.	+	0	ID=cds-STY7866_RS26770;Parent=gene-STY7866_RS26770;Note=involved in nicotinamide riboside transport%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=17122,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455308.1;locus_tag=STY7866_RS26770;partial=true;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	17540	19564	.	+	.	ID=gene-STY7866_RS01290;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=STY7866_RS01290
NZ_CAAR01000042.1	Protein Homology	CDS	17540	19564	.	+	0	ID=cds-WP_001238841.1;Parent=gene-STY7866_RS01290;Dbxref=Genbank:WP_001238841.1;Name=WP_001238841.1;gbkey=CDS;gene=rep;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457834.1;locus_tag=STY7866_RS01290;product=DNA helicase Rep;protein_id=WP_001238841.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	19604	21085	.	-	.	ID=gene-STY7866_RS01295;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=STY7866_RS01295
NZ_CAAR01000042.1	Protein Homology	CDS	19604	21085	.	-	0	ID=cds-WP_001089447.1;Parent=gene-STY7866_RS01295;Dbxref=Genbank:WP_001089447.1;Name=WP_001089447.1;gbkey=CDS;gene=gppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457833.1;locus_tag=STY7866_RS01295;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001089447.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	21204	22367	.	-	.	ID=gene-STY7866_RS01300;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=STY7866_RS01300
NZ_CAAR01000042.1	Protein Homology	CDS	21204	22367	.	-	0	ID=cds-WP_045715569.1;Parent=gene-STY7866_RS01300;Dbxref=Genbank:WP_045715569.1;Name=WP_045715569.1;gbkey=CDS;gene=rhlB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001671427.1;locus_tag=STY7866_RS01300;product=ATP-dependent RNA helicase RhlB;protein_id=WP_045715569.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	22612	22941	.	+	.	ID=gene-STY7866_RS01305;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=STY7866_RS01305
NZ_CAAR01000042.1	Protein Homology	CDS	22612	22941	.	+	0	ID=cds-WP_001280776.1;Parent=gene-STY7866_RS01305;Dbxref=Genbank:WP_001280776.1;Name=WP_001280776.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=STY7866_RS01305;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	23138	23272	.	+	.	ID=gene-STY7866_RS26775;Name=STY7866_RS26775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26775
NZ_CAAR01000042.1	Protein Homology	CDS	23138	23272	.	+	0	ID=cds-WP_099107992.1;Parent=gene-STY7866_RS26775;Dbxref=Genbank:WP_099107992.1;Name=WP_099107992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=STY7866_RS26775;product=rho operon leader peptide;protein_id=WP_099107992.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	23360	24619	.	+	.	ID=gene-STY7866_RS01310;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=STY7866_RS01310
NZ_CAAR01000042.1	Protein Homology	CDS	23360	24619	.	+	0	ID=cds-WP_001054532.1;Parent=gene-STY7866_RS01310;Dbxref=Genbank:WP_001054532.1;Name=WP_001054532.1;gbkey=CDS;gene=rho;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457830.1;locus_tag=STY7866_RS01310;product=transcription termination factor Rho;protein_id=WP_001054532.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	24849	25952	.	+	.	ID=gene-STY7866_RS01315;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=STY7866_RS01315
NZ_CAAR01000042.1	Protein Homology	CDS	24849	25952	.	+	0	ID=cds-WP_000771938.1;Parent=gene-STY7866_RS01315;Dbxref=Genbank:WP_000771938.1;Name=WP_000771938.1;gbkey=CDS;gene=wecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457829.1;locus_tag=STY7866_RS01315;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_000771938.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	25964	27010	.	+	.	ID=gene-STY7866_RS01320;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=STY7866_RS01320
NZ_CAAR01000042.1	Protein Homology	CDS	25964	27010	.	+	0	ID=cds-WP_000193414.1;Parent=gene-STY7866_RS01320;Dbxref=Genbank:WP_000193414.1;Name=WP_000193414.1;gbkey=CDS;gene=wzzE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457828.1;locus_tag=STY7866_RS01320;product=ECA polysaccharide chain length modulation protein;protein_id=WP_000193414.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	27066	28196	.	+	.	ID=gene-STY7866_RS01325;Name=STY7866_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01325
NZ_CAAR01000042.1	Protein Homology	CDS	27066	28196	.	+	0	ID=cds-WP_000866686.1;Parent=gene-STY7866_RS01325;Dbxref=Genbank:WP_000866686.1;Name=WP_000866686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457827.1;locus_tag=STY7866_RS01325;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WP_000866686.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	28193	29455	.	+	.	ID=gene-STY7866_RS01330;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=STY7866_RS01330
NZ_CAAR01000042.1	Protein Homology	CDS	28193	29455	.	+	0	ID=cds-WP_000011236.1;Parent=gene-STY7866_RS01330;Dbxref=Genbank:WP_000011236.1;Name=WP_000011236.1;gbkey=CDS;gene=wecC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457826.1;locus_tag=STY7866_RS01330;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000011236.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	29455	30522	.	+	.	ID=gene-STY7866_RS01335;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=STY7866_RS01335
NZ_CAAR01000042.1	Protein Homology	CDS	29455	30522	.	+	0	ID=cds-WP_000822139.1;Parent=gene-STY7866_RS01335;Dbxref=Genbank:WP_000822139.1;Name=WP_000822139.1;gbkey=CDS;gene=rffG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457825.1;locus_tag=STY7866_RS01335;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000822139.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	30555	31436	.	+	.	ID=gene-STY7866_RS01340;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=STY7866_RS01340
NZ_CAAR01000042.1	Protein Homology	CDS	30555	31436	.	+	0	ID=cds-WP_000676077.1;Parent=gene-STY7866_RS01340;Dbxref=Genbank:WP_000676077.1;Name=WP_000676077.1;gbkey=CDS;gene=rfbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=STY7866_RS01340;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000676077.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	31387	32091	.	+	.	ID=gene-STY7866_RS01345;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=STY7866_RS01345
NZ_CAAR01000042.1	Protein Homology	CDS	31387	32091	.	+	0	ID=cds-WP_077905078.1;Parent=gene-STY7866_RS01345;Dbxref=Genbank:WP_077905078.1;Name=WP_077905078.1;gbkey=CDS;gene=rffC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001614736.1;locus_tag=STY7866_RS01345;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_077905078.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	32096	33226	.	+	.	ID=gene-STY7866_RS01350;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=STY7866_RS01350
NZ_CAAR01000042.1	Protein Homology	CDS	32096	33226	.	+	0	ID=cds-WP_000612080.1;Parent=gene-STY7866_RS01350;Dbxref=Genbank:WP_000612080.1;Name=WP_000612080.1;gbkey=CDS;gene=rffA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457822.1;locus_tag=STY7866_RS01350;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612080.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	33228	34478	.	+	.	ID=gene-STY7866_RS01355;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=STY7866_RS01355
NZ_CAAR01000042.1	Protein Homology	CDS	33228	34478	.	+	0	ID=cds-WP_000050302.1;Parent=gene-STY7866_RS01355;Dbxref=Genbank:WP_000050302.1;Name=WP_000050302.1;gbkey=CDS;gene=wzxE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457821.1;locus_tag=STY7866_RS01355;product=lipid III flippase WzxE;protein_id=WP_000050302.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	34475	35554	.	+	.	ID=gene-STY7866_RS01360;Name=STY7866_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01360
NZ_CAAR01000042.1	Protein Homology	CDS	34475	35554	.	+	0	ID=cds-WP_000217177.1;Parent=gene-STY7866_RS01360;Dbxref=Genbank:WP_000217177.1;Name=WP_000217177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457820.1;locus_tag=STY7866_RS01360;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217177.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	35551	36909	.	+	.	ID=gene-STY7866_RS01365;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=STY7866_RS01365
NZ_CAAR01000042.1	Protein Homology	CDS	35551	36909	.	+	0	ID=cds-WP_000055604.1;Parent=gene-STY7866_RS01365;Dbxref=Genbank:WP_000055604.1;Name=WP_000055604.1;gbkey=CDS;gene=wzyE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457819.1;locus_tag=STY7866_RS01365;product=O-antigen assembly polymerase;protein_id=WP_000055604.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	36906	37646	.	+	.	ID=gene-STY7866_RS01370;Name=rffM;gbkey=Gene;gene=rffM;gene_biotype=protein_coding;locus_tag=STY7866_RS01370
NZ_CAAR01000042.1	Protein Homology	CDS	36906	37646	.	+	0	ID=cds-WP_000183613.1;Parent=gene-STY7866_RS01370;Dbxref=Genbank:WP_000183613.1;Name=WP_000183613.1;gbkey=CDS;gene=rffM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457818.1;locus_tag=STY7866_RS01370;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_000183613.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	37853	39238	.	+	.	ID=gene-STY7866_RS01375;Name=STY7866_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01375
NZ_CAAR01000042.1	Protein Homology	CDS	37853	39238	.	+	0	ID=cds-WP_000818378.1;Parent=gene-STY7866_RS01375;Dbxref=Genbank:WP_000818378.1;Name=WP_000818378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457817.1;locus_tag=STY7866_RS01375;product=amino acid permease;protein_id=WP_000818378.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	39341	39417	.	+	.	ID=gene-STY7866_RS01380;Name=STY7866_RS01380;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS01380
NZ_CAAR01000042.1	tRNAscan-SE	tRNA	39341	39417	.	+	.	ID=rna-STY7866_RS01380;Parent=gene-STY7866_RS01380;anticodon=(pos:39375..39377);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS01380;product=tRNA-Arg
NZ_CAAR01000042.1	tRNAscan-SE	exon	39341	39417	.	+	.	ID=exon-STY7866_RS01380-1;Parent=rna-STY7866_RS01380;anticodon=(pos:39375..39377);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS01380;product=tRNA-Arg
NZ_CAAR01000042.1	RefSeq	gene	39472	39547	.	+	.	ID=gene-STY7866_RS01385;Name=STY7866_RS01385;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS01385
NZ_CAAR01000042.1	tRNAscan-SE	tRNA	39472	39547	.	+	.	ID=rna-STY7866_RS01385;Parent=gene-STY7866_RS01385;anticodon=(pos:39505..39507);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS01385;product=tRNA-His
NZ_CAAR01000042.1	tRNAscan-SE	exon	39472	39547	.	+	.	ID=exon-STY7866_RS01385-1;Parent=rna-STY7866_RS01385;anticodon=(pos:39505..39507);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS01385;product=tRNA-His
NZ_CAAR01000042.1	RefSeq	gene	39568	39654	.	+	.	ID=gene-STY7866_RS01390;Name=STY7866_RS01390;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS01390
NZ_CAAR01000042.1	tRNAscan-SE	tRNA	39568	39654	.	+	.	ID=rna-STY7866_RS01390;Parent=gene-STY7866_RS01390;anticodon=(pos:39602..39604);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS01390;product=tRNA-Leu
NZ_CAAR01000042.1	tRNAscan-SE	exon	39568	39654	.	+	.	ID=exon-STY7866_RS01390-1;Parent=rna-STY7866_RS01390;anticodon=(pos:39602..39604);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS01390;product=tRNA-Leu
NZ_CAAR01000042.1	RefSeq	gene	39697	39773	.	+	.	ID=gene-STY7866_RS01395;Name=STY7866_RS01395;gbkey=Gene;gene_biotype=tRNA;locus_tag=STY7866_RS01395
NZ_CAAR01000042.1	tRNAscan-SE	tRNA	39697	39773	.	+	.	ID=rna-STY7866_RS01395;Parent=gene-STY7866_RS01395;anticodon=(pos:39731..39733);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS01395;product=tRNA-Pro
NZ_CAAR01000042.1	tRNAscan-SE	exon	39697	39773	.	+	.	ID=exon-STY7866_RS01395-1;Parent=rna-STY7866_RS01395;anticodon=(pos:39731..39733);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=STY7866_RS01395;product=tRNA-Pro
NZ_CAAR01000042.1	RefSeq	gene	40355	41554	.	-	.	ID=gene-STY7866_RS01400;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=STY7866_RS01400
NZ_CAAR01000042.1	Protein Homology	CDS	40355	41554	.	-	0	ID=cds-WP_000979266.1;Parent=gene-STY7866_RS01400;Dbxref=Genbank:WP_000979266.1;Name=WP_000979266.1;gbkey=CDS;gene=hemY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457816.1;locus_tag=STY7866_RS01400;product=protoheme IX biogenesis protein HemY;protein_id=WP_000979266.1;transl_table=11
NZ_CAAR01000042.1	RefSeq	gene	41554	42247	.	-	.	ID=gene-STY7866_RS01405;Name=hemX;end_range=42247,.;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=STY7866_RS01405;partial=true
NZ_CAAR01000042.1	Protein Homology	CDS	41554	42247	.	-	1	ID=cds-WP_000629817.1;Parent=gene-STY7866_RS01405;Dbxref=Genbank:WP_000629817.1;Name=WP_000629817.1;end_range=42247,.;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457815.1;locus_tag=STY7866_RS01405;partial=true;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000629817.1;transl_table=11
##sequence-region NZ_CAAR01000041.1 1 3021
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000041.1	RefSeq	region	1	3021	.	+	.	ID=NZ_CAAR01000041.1:1..3021;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000041.1	RefSeq	gene	1	201	.	-	.	ID=gene-STY7866_RS01140;Name=STY7866_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01140;partial=true;start_range=.,1
NZ_CAAR01000041.1	Protein Homology	CDS	1	201	.	-	0	ID=cds-WP_001244239.1;Parent=gene-STY7866_RS01140;Dbxref=Genbank:WP_001244239.1;Name=WP_001244239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458719.1;locus_tag=STY7866_RS01140;partial=true;product=DUF2732 domain-containing protein;protein_id=WP_001244239.1;start_range=.,1;transl_table=11
NZ_CAAR01000041.1	RefSeq	gene	269	610	.	-	.	ID=gene-STY7866_RS01145;Name=STY7866_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01145
NZ_CAAR01000041.1	Protein Homology	CDS	269	610	.	-	0	ID=cds-WP_000963479.1;Parent=gene-STY7866_RS01145;Dbxref=Genbank:WP_000963479.1;Name=WP_000963479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458720.1;locus_tag=STY7866_RS01145;product=DUF5347 domain-containing protein;protein_id=WP_000963479.1;transl_table=11
NZ_CAAR01000041.1	RefSeq	gene	574	774	.	-	.	ID=gene-STY7866_RS01150;Name=STY7866_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01150
NZ_CAAR01000041.1	Protein Homology	CDS	574	774	.	-	0	ID=cds-WP_000956167.1;Parent=gene-STY7866_RS01150;Dbxref=Genbank:WP_000956167.1;Name=WP_000956167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458721.1;locus_tag=STY7866_RS01150;product=DUF2724 domain-containing protein;protein_id=WP_000956167.1;transl_table=11
NZ_CAAR01000041.1	RefSeq	gene	782	1291	.	-	.	ID=gene-STY7866_RS01155;Name=STY7866_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01155
NZ_CAAR01000041.1	Protein Homology	CDS	782	1291	.	-	0	ID=cds-WP_000460852.1;Parent=gene-STY7866_RS01155;Dbxref=Genbank:WP_000460852.1;Name=WP_000460852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458722.1;locus_tag=STY7866_RS01155;product=phage regulatory CII family protein;protein_id=WP_000460852.1;transl_table=11
NZ_CAAR01000041.1	RefSeq	gene	1324	1566	.	-	.	ID=gene-STY7866_RS01160;Name=STY7866_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01160
NZ_CAAR01000041.1	Protein Homology	CDS	1324	1566	.	-	0	ID=cds-WP_000102106.1;Parent=gene-STY7866_RS01160;Dbxref=Genbank:WP_000102106.1;Name=WP_000102106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458723.1;locus_tag=STY7866_RS01160;product=Rha family transcriptional regulator;protein_id=WP_000102106.1;transl_table=11
NZ_CAAR01000041.1	RefSeq	gene	1683	2315	.	+	.	ID=gene-STY7866_RS01165;Name=STY7866_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01165
NZ_CAAR01000041.1	Protein Homology	CDS	1683	2315	.	+	0	ID=cds-WP_000052560.1;Parent=gene-STY7866_RS01165;Dbxref=Genbank:WP_000052560.1;Name=WP_000052560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458724.1;locus_tag=STY7866_RS01165;product=phage repressor protein;protein_id=WP_000052560.1;transl_table=11
NZ_CAAR01000041.1	RefSeq	gene	2319	3021	.	+	.	ID=gene-STY7866_RS01170;Name=STY7866_RS01170;end_range=3021,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01170;partial=true
NZ_CAAR01000041.1	Protein Homology	CDS	2319	3021	.	+	0	ID=cds-WP_001763837.1;Parent=gene-STY7866_RS01170;Dbxref=Genbank:WP_001763837.1;Name=WP_001763837.1;end_range=3021,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458725.1;locus_tag=STY7866_RS01170;partial=true;product=tyrosine-type recombinase/integrase;protein_id=WP_001763837.1;transl_table=11
##sequence-region NZ_CAAR01000040.1 1 2763
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000040.1	RefSeq	region	1	2763	.	+	.	ID=NZ_CAAR01000040.1:1..2763;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000040.1	RefSeq	gene	19	876	.	+	.	ID=gene-STY7866_RS01130;Name=STY7866_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01130
NZ_CAAR01000040.1	Protein Homology	CDS	19	876	.	+	0	ID=cds-WP_000104152.1;Parent=gene-STY7866_RS01130;Dbxref=Genbank:WP_000104152.1;Name=WP_000104152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457858.1;locus_tag=STY7866_RS01130;product=DNA adenine methylase;protein_id=WP_000104152.1;transl_table=11
NZ_CAAR01000040.1	RefSeq	pseudogene	873	2763	.	+	.	ID=gene-STY7866_RS01135;Name=STY7866_RS01135;end_range=2763,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS01135;partial=true;pseudo=true
NZ_CAAR01000040.1	Protein Homology	CDS	873	2763	.	+	0	ID=cds-STY7866_RS01135;Parent=gene-STY7866_RS01135;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=2763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457859.1;locus_tag=STY7866_RS01135;partial=true;product=replication endonuclease;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000039.1 1 571
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000039.1	RefSeq	region	1	571	.	+	.	ID=NZ_CAAR01000039.1:1..571;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000039.1	RefSeq	gene	1	571	.	-	.	ID=gene-STY7866_RS01125;Name=STY7866_RS01125;end_range=571,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01125;partial=true;start_range=.,1
NZ_CAAR01000039.1	Protein Homology	CDS	1	571	.	-	0	ID=cds-WP_000314406.1;Parent=gene-STY7866_RS01125;Dbxref=Genbank:WP_000314406.1;Name=WP_000314406.1;end_range=571,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458710.1;locus_tag=STY7866_RS01125;partial=true;product=phage portal protein;protein_id=WP_000314406.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000038.1 1 4582
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000038.1	RefSeq	region	1	4582	.	+	.	ID=NZ_CAAR01000038.1:1..4582;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000038.1	RefSeq	pseudogene	1	192	.	+	.	ID=gene-STY7866_RS01090;Name=STY7866_RS01090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS01090;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000038.1	Protein Homology	CDS	1	192	.	+	0	ID=cds-STY7866_RS01090;Parent=gene-STY7866_RS01090;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457865.1;locus_tag=STY7866_RS01090;partial=true;product=Presumed portal vertex protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000038.1	RefSeq	pseudogene	227	970	.	-	.	ID=gene-STY7866_RS01095;Name=STY7866_RS01095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS01095;pseudo=true
NZ_CAAR01000038.1	Protein Homology	CDS	227	970	.	-	0	ID=cds-STY7866_RS01095;Parent=gene-STY7866_RS01095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457864.1;locus_tag=STY7866_RS01095;product=restriction endonuclease;pseudo=true;transl_table=11
NZ_CAAR01000038.1	RefSeq	gene	967	1881	.	-	.	ID=gene-STY7866_RS01100;Name=STY7866_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01100
NZ_CAAR01000038.1	Protein Homology	CDS	967	1881	.	-	0	ID=cds-WP_001146827.1;Parent=gene-STY7866_RS01100;Dbxref=Genbank:WP_001146827.1;Name=WP_001146827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457863.1;locus_tag=STY7866_RS01100;product=hypothetical protein;protein_id=WP_001146827.1;transl_table=11
NZ_CAAR01000038.1	RefSeq	gene	2495	3373	.	+	.	ID=gene-STY7866_RS01105;Name=STY7866_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01105
NZ_CAAR01000038.1	Protein Homology	CDS	2495	3373	.	+	0	ID=cds-WP_001251692.1;Parent=gene-STY7866_RS01105;Dbxref=Genbank:WP_001251692.1;Name=WP_001251692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251691.1;locus_tag=STY7866_RS01105;product=hypothetical protein;protein_id=WP_001251692.1;transl_table=11
NZ_CAAR01000038.1	RefSeq	gene	3482	3781	.	+	.	ID=gene-STY7866_RS01110;Name=STY7866_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01110
NZ_CAAR01000038.1	Protein Homology	CDS	3482	3781	.	+	0	ID=cds-WP_000822803.1;Parent=gene-STY7866_RS01110;Dbxref=Genbank:WP_000822803.1;Name=WP_000822803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000822802.1;locus_tag=STY7866_RS01110;product=hypothetical protein;protein_id=WP_000822803.1;transl_table=11
NZ_CAAR01000038.1	RefSeq	gene	3849	4037	.	-	.	ID=gene-STY7866_RS01115;Name=STY7866_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01115
NZ_CAAR01000038.1	Protein Homology	CDS	3849	4037	.	-	0	ID=cds-WP_001580533.1;Parent=gene-STY7866_RS01115;Dbxref=Genbank:WP_001580533.1;Name=WP_001580533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457860.1;locus_tag=STY7866_RS01115;product=hypothetical protein;protein_id=WP_001580533.1;transl_table=11
NZ_CAAR01000038.1	RefSeq	pseudogene	4191	4582	.	-	.	ID=gene-STY7866_RS01120;Name=STY7866_RS01120;end_range=4582,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS01120;partial=true;pseudo=true
NZ_CAAR01000038.1	Protein Homology	CDS	4191	4582	.	-	2	ID=cds-STY7866_RS01120;Parent=gene-STY7866_RS01120;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4582,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457859.1;locus_tag=STY7866_RS01120;partial=true;product=replication endonuclease;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000037.1 1 166
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000037.1	RefSeq	region	1	166	.	+	.	ID=NZ_CAAR01000037.1:1..166;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000036.1 1 1209
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000036.1	RefSeq	region	1	1209	.	+	.	ID=NZ_CAAR01000036.1:1..1209;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000036.1	RefSeq	gene	1	573	.	+	.	ID=gene-STY7866_RS01080;Name=STY7866_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01080;partial=true;start_range=.,1
NZ_CAAR01000036.1	Protein Homology	CDS	1	573	.	+	0	ID=cds-WP_000685905.1;Parent=gene-STY7866_RS01080;Dbxref=Genbank:WP_000685905.1;Name=WP_000685905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457868.1;locus_tag=STY7866_RS01080;partial=true;product=phage capsid protein;protein_id=WP_000685905.1;start_range=.,1;transl_table=11
NZ_CAAR01000036.1	RefSeq	gene	577	1209	.	+	.	ID=gene-STY7866_RS01085;Name=STY7866_RS01085;end_range=1209,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01085;partial=true
NZ_CAAR01000036.1	Protein Homology	CDS	577	1209	.	+	0	ID=cds-WP_000059190.1;Parent=gene-STY7866_RS01085;Dbxref=Genbank:WP_000059190.1;Name=WP_000059190.1;end_range=1209,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457869.1;locus_tag=STY7866_RS01085;partial=true;product=terminase endonuclease subunit;protein_id=WP_000059190.1;transl_table=11
##sequence-region NZ_CAAR01000035.1 1 1279
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000035.1	RefSeq	region	1	1279	.	+	.	ID=NZ_CAAR01000035.1:1..1279;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000035.1	RefSeq	pseudogene	1	579	.	+	.	ID=gene-STY7866_RS01070;Name=STY7866_RS01070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS01070;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000035.1	Protein Homology	CDS	1	579	.	+	0	ID=cds-STY7866_RS01070;Parent=gene-STY7866_RS01070;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458707.1;locus_tag=STY7866_RS01070;partial=true;product=capsid protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000035.1	RefSeq	gene	583	1233	.	+	.	ID=gene-STY7866_RS01075;Name=STY7866_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01075
NZ_CAAR01000035.1	Protein Homology	CDS	583	1233	.	+	0	ID=cds-WP_000059175.1;Parent=gene-STY7866_RS01075;Dbxref=Genbank:WP_000059175.1;Name=WP_000059175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458706.1;locus_tag=STY7866_RS01075;product=terminase endonuclease subunit;protein_id=WP_000059175.1;transl_table=11
##sequence-region NZ_CAAR01000034.1 1 284
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000034.1	RefSeq	region	1	284	.	+	.	ID=NZ_CAAR01000034.1:1..284;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000034.1	RefSeq	gene	1	284	.	-	.	ID=gene-STY7866_RS01065;Name=STY7866_RS01065;end_range=284,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01065;partial=true;start_range=.,1
NZ_CAAR01000034.1	Protein Homology	CDS	1	284	.	-	1	ID=cds-WP_000363845.1;Parent=gene-STY7866_RS01065;Dbxref=Genbank:WP_000363845.1;Name=WP_000363845.1;end_range=284,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000283397.1;locus_tag=STY7866_RS01065;partial=true;product=hypothetical protein;protein_id=WP_000363845.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000033.1 1 34367
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000033.1	RefSeq	region	1	34367	.	+	.	ID=NZ_CAAR01000033.1:1..34367;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000033.1	RefSeq	gene	63	635	.	+	.	ID=gene-STY7866_RS00890;Name=STY7866_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00890
NZ_CAAR01000033.1	Protein Homology	CDS	63	635	.	+	0	ID=cds-WP_001165548.1;Parent=gene-STY7866_RS00890;Dbxref=Genbank:WP_001165548.1;Name=WP_001165548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456054.1;locus_tag=STY7866_RS00890;product=recombinase family protein;protein_id=WP_001165548.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	559	765	.	-	.	ID=gene-STY7866_RS26750;Name=STY7866_RS26750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26750
NZ_CAAR01000033.1	Protein Homology	CDS	559	765	.	-	0	ID=cds-WP_151259995.1;Parent=gene-STY7866_RS26750;Dbxref=Genbank:WP_151259995.1;Name=WP_151259995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001210956.1;locus_tag=STY7866_RS26750;product=hypothetical protein;protein_id=WP_151259995.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	915	2297	.	+	.	ID=gene-STY7866_RS00895;Name=STY7866_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00895
NZ_CAAR01000033.1	Protein Homology	CDS	915	2297	.	+	0	ID=cds-WP_000412353.1;Parent=gene-STY7866_RS00895;Dbxref=Genbank:WP_000412353.1;Name=WP_000412353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456055.1;locus_tag=STY7866_RS00895;product=amino acid permease;protein_id=WP_000412353.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	2359	2694	.	-	.	ID=gene-STY7866_RS00900;Name=STY7866_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00900
NZ_CAAR01000033.1	Protein Homology	CDS	2359	2694	.	-	0	ID=cds-WP_000524877.1;Parent=gene-STY7866_RS00900;Dbxref=Genbank:WP_000524877.1;Name=WP_000524877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456056.1;locus_tag=STY7866_RS00900;product=GlpM family protein;protein_id=WP_000524877.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	2821	3552	.	+	.	ID=gene-STY7866_RS00905;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=STY7866_RS00905
NZ_CAAR01000033.1	Protein Homology	CDS	2821	3552	.	+	0	ID=cds-WP_001080045.1;Parent=gene-STY7866_RS00905;Dbxref=Genbank:WP_001080045.1;Name=WP_001080045.1;gbkey=CDS;gene=rstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456057.1;locus_tag=STY7866_RS00905;product=two-component system response regulator RstA;protein_id=WP_001080045.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	3617	3916	.	-	.	ID=gene-STY7866_RS26355;Name=STY7866_RS26355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26355
NZ_CAAR01000033.1	Protein Homology	CDS	3617	3916	.	-	0	ID=cds-WP_000924582.1;Parent=gene-STY7866_RS26355;Dbxref=Genbank:WP_000924582.1;Name=WP_000924582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000924580.1;locus_tag=STY7866_RS26355;product=hypothetical protein;protein_id=WP_000924582.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	4033	5184	.	+	.	ID=gene-STY7866_RS00915;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=STY7866_RS00915
NZ_CAAR01000033.1	Protein Homology	CDS	4033	5184	.	+	0	ID=cds-WP_000824322.1;Parent=gene-STY7866_RS00915;Dbxref=Genbank:WP_000824322.1;Name=WP_000824322.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456059.1;locus_tag=STY7866_RS00915;product=porin OmpS2;protein_id=WP_000824322.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	5337	7043	.	+	.	ID=gene-STY7866_RS00920;Name=STY7866_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00920
NZ_CAAR01000033.1	Protein Homology	CDS	5337	7043	.	+	0	ID=cds-WP_000928668.1;Parent=gene-STY7866_RS00920;Dbxref=Genbank:WP_000928668.1;Name=WP_000928668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456060.1;locus_tag=STY7866_RS00920;product=amidohydrolase;protein_id=WP_000928668.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	pseudogene	7154	8454	.	+	.	ID=gene-STY7866_RS00925;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=pseudogene;locus_tag=STY7866_RS00925;pseudo=true
NZ_CAAR01000033.1	Protein Homology	CDS	7154	8454	.	+	0	ID=cds-STY7866_RS00925;Parent=gene-STY7866_RS00925;Note=frameshifted;gbkey=CDS;gene=rstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=STY7866_RS00925;product=two-component system sensor histidine kinase RstB;pseudo=true;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	8530	9459	.	+	.	ID=gene-STY7866_RS00930;Name=STY7866_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00930
NZ_CAAR01000033.1	Protein Homology	CDS	8530	9459	.	+	0	ID=cds-WP_000092483.1;Parent=gene-STY7866_RS00930;Dbxref=Genbank:WP_000092483.1;Name=WP_000092483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456062.1;locus_tag=STY7866_RS00930;product=DNA replication terminus site-binding protein;protein_id=WP_000092483.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	9456	10859	.	-	.	ID=gene-STY7866_RS00935;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=STY7866_RS00935
NZ_CAAR01000033.1	Protein Homology	CDS	9456	10859	.	-	0	ID=cds-WP_000259129.1;Parent=gene-STY7866_RS00935;Dbxref=Genbank:WP_000259129.1;Name=WP_000259129.1;gbkey=CDS;gene=fumC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456063.1;locus_tag=STY7866_RS00935;product=class II fumarate hydratase;protein_id=WP_000259129.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	11027	12673	.	-	.	ID=gene-STY7866_RS00940;Name=STY7866_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00940
NZ_CAAR01000033.1	Protein Homology	CDS	11027	12673	.	-	0	ID=cds-WP_000066606.1;Parent=gene-STY7866_RS00940;Dbxref=Genbank:WP_000066606.1;Name=WP_000066606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=STY7866_RS00940;product=fumarate hydratase;protein_id=WP_000066606.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	12873	14048	.	+	.	ID=gene-STY7866_RS00945;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=STY7866_RS00945
NZ_CAAR01000033.1	Protein Homology	CDS	12873	14048	.	+	0	ID=cds-WP_001170615.1;Parent=gene-STY7866_RS00945;Dbxref=Genbank:WP_001170615.1;Name=WP_001170615.1;gbkey=CDS;gene=manA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456065.1;locus_tag=STY7866_RS00945;product=mannose-6-phosphate isomerase;protein_id=WP_001170615.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	14151	15659	.	+	.	ID=gene-STY7866_RS00950;Name=STY7866_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00950
NZ_CAAR01000033.1	Protein Homology	CDS	14151	15659	.	+	0	ID=cds-WP_000753325.1;Parent=gene-STY7866_RS00950;Dbxref=Genbank:WP_000753325.1;Name=WP_000753325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456066.1;locus_tag=STY7866_RS00950;product=YdgA family protein;protein_id=WP_000753325.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	15780	15998	.	+	.	ID=gene-STY7866_RS00955;Name=STY7866_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00955
NZ_CAAR01000033.1	Protein Homology	CDS	15780	15998	.	+	0	ID=cds-WP_077949083.1;Parent=gene-STY7866_RS00955;Dbxref=Genbank:WP_077949083.1;Name=WP_077949083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000654274.1;locus_tag=STY7866_RS00955;product=PTS maltose transporter subunit IIBC;protein_id=WP_077949083.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	pseudogene	16008	16139	.	+	.	ID=gene-STY7866_RS26755;Name=STY7866_RS26755;end_range=16139,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26755;partial=true;pseudo=true
NZ_CAAR01000033.1	Protein Homology	CDS	16008	16139	.	+	0	ID=cds-STY7866_RS26755;Parent=gene-STY7866_RS26755;Note=catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=16139,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459379.1;locus_tag=STY7866_RS26755;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	16365	17366	.	+	.	ID=gene-STY7866_RS00960;Name=STY7866_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00960
NZ_CAAR01000033.1	Protein Homology	CDS	16365	17366	.	+	0	ID=cds-WP_000565566.1;Parent=gene-STY7866_RS00960;Dbxref=Genbank:WP_000565566.1;Name=WP_000565566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456067.1;locus_tag=STY7866_RS00960;product=adenosine deaminase;protein_id=WP_000565566.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	17440	18555	.	-	.	ID=gene-STY7866_RS00965;Name=STY7866_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00965
NZ_CAAR01000033.1	Protein Homology	CDS	17440	18555	.	-	0	ID=cds-WP_021013203.1;Parent=gene-STY7866_RS00965;Dbxref=Genbank:WP_021013203.1;Name=WP_021013203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456068.3;locus_tag=STY7866_RS00965;product=oxidoreductase;protein_id=WP_021013203.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	18658	18813	.	+	.	ID=gene-STY7866_RS00970;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=STY7866_RS00970
NZ_CAAR01000033.1	Protein Homology	CDS	18658	18813	.	+	0	ID=cds-WP_000361450.1;Parent=gene-STY7866_RS00970;Dbxref=Genbank:WP_000361450.1;Name=WP_000361450.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991985.1;locus_tag=STY7866_RS00970;product=division septum protein Blr;protein_id=WP_000361450.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	19112	19327	.	+	.	ID=gene-STY7866_RS00975;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=STY7866_RS00975
NZ_CAAR01000033.1	Protein Homology	CDS	19112	19327	.	+	0	ID=cds-WP_000217946.1;Parent=gene-STY7866_RS00975;Dbxref=Genbank:WP_000217946.1;Name=WP_000217946.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456069.1;locus_tag=STY7866_RS00975;product=transcription modulator YdgT;protein_id=WP_000217946.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	19416	19856	.	+	.	ID=gene-STY7866_RS00980;Name=STY7866_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00980
NZ_CAAR01000033.1	Protein Homology	CDS	19416	19856	.	+	0	ID=cds-WP_000214061.1;Parent=gene-STY7866_RS00980;Dbxref=Genbank:WP_000214061.1;Name=WP_000214061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456070.1;locus_tag=STY7866_RS00980;product=DUF2569 domain-containing protein;protein_id=WP_000214061.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	19933	20514	.	+	.	ID=gene-STY7866_RS00985;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=STY7866_RS00985
NZ_CAAR01000033.1	Protein Homology	CDS	19933	20514	.	+	0	ID=cds-WP_000133179.1;Parent=gene-STY7866_RS00985;Dbxref=Genbank:WP_000133179.1;Name=WP_000133179.1;gbkey=CDS;gene=rsxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=STY7866_RS00985;product=electron transport complex subunit RsxA;protein_id=WP_000133179.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	20514	21092	.	+	.	ID=gene-STY7866_RS00990;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=STY7866_RS00990
NZ_CAAR01000033.1	Protein Homology	CDS	20514	21092	.	+	0	ID=cds-WP_001092600.1;Parent=gene-STY7866_RS00990;Dbxref=Genbank:WP_001092600.1;Name=WP_001092600.1;gbkey=CDS;gene=rsxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456072.1;locus_tag=STY7866_RS00990;product=electron transport complex subunit RsxB;protein_id=WP_001092600.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	21085	23106	.	+	.	ID=gene-STY7866_RS00995;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=STY7866_RS00995
NZ_CAAR01000033.1	Protein Homology	CDS	21085	23106	.	+	0	ID=cds-WP_000915581.1;Parent=gene-STY7866_RS00995;Dbxref=Genbank:WP_000915581.1;Name=WP_000915581.1;gbkey=CDS;gene=rsxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456073.1;locus_tag=STY7866_RS00995;product=electron transport complex subunit RsxC;protein_id=WP_000915581.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	23107	24165	.	+	.	ID=gene-STY7866_RS01000;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=STY7866_RS01000
NZ_CAAR01000033.1	Protein Homology	CDS	23107	24165	.	+	0	ID=cds-WP_000231887.1;Parent=gene-STY7866_RS01000;Dbxref=Genbank:WP_000231887.1;Name=WP_000231887.1;gbkey=CDS;gene=rsxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456074.1;locus_tag=STY7866_RS01000;product=electron transport complex subunit RsxD;protein_id=WP_000231887.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	24169	24789	.	+	.	ID=gene-STY7866_RS01005;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=STY7866_RS01005
NZ_CAAR01000033.1	Protein Homology	CDS	24169	24789	.	+	0	ID=cds-WP_000920820.1;Parent=gene-STY7866_RS01005;Dbxref=Genbank:WP_000920820.1;Name=WP_000920820.1;gbkey=CDS;gene=rsxG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456075.1;locus_tag=STY7866_RS01005;product=electron transport complex subunit RsxG;protein_id=WP_000920820.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	24792	25484	.	+	.	ID=gene-STY7866_RS01010;Name=STY7866_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01010
NZ_CAAR01000033.1	Protein Homology	CDS	24792	25484	.	+	0	ID=cds-WP_001289628.1;Parent=gene-STY7866_RS01010;Dbxref=Genbank:WP_001289628.1;Name=WP_001289628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456076.1;locus_tag=STY7866_RS01010;product=electron transport complex subunit E;protein_id=WP_001289628.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	25484	26119	.	+	.	ID=gene-STY7866_RS01015;Name=STY7866_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS01015
NZ_CAAR01000033.1	Protein Homology	CDS	25484	26119	.	+	0	ID=cds-WP_001030326.1;Parent=gene-STY7866_RS01015;Dbxref=Genbank:WP_001030326.1;Name=WP_001030326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456077.1;locus_tag=STY7866_RS01015;product=endonuclease III;protein_id=WP_001030326.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	26720	28225	.	+	.	ID=gene-STY7866_RS01020;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=STY7866_RS01020
NZ_CAAR01000033.1	Protein Homology	CDS	26720	28225	.	+	0	ID=cds-WP_000100913.1;Parent=gene-STY7866_RS01020;Dbxref=Genbank:WP_000100913.1;Name=WP_000100913.1;gbkey=CDS;gene=dtpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456078.1;locus_tag=STY7866_RS01020;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100913.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	28329	28934	.	+	.	ID=gene-STY7866_RS01025;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=STY7866_RS01025
NZ_CAAR01000033.1	Protein Homology	CDS	28329	28934	.	+	0	ID=cds-WP_000765713.1;Parent=gene-STY7866_RS01025;Dbxref=Genbank:WP_000765713.1;Name=WP_000765713.1;gbkey=CDS;gene=gstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456079.1;locus_tag=STY7866_RS01025;product=glutathione transferase GstA;protein_id=WP_000765713.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	pseudogene	28964	29623	.	-	.	ID=gene-STY7866_RS01030;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=pseudogene;locus_tag=STY7866_RS01030;partial=true;pseudo=true;start_range=.,28964
NZ_CAAR01000033.1	Protein Homology	CDS	28964	29623	.	-	0	ID=cds-STY7866_RS01030;Parent=gene-STY7866_RS01030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=pdxY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=STY7866_RS01030;partial=true;product=pyridoxal kinase PdxY;pseudo=true;start_range=.,28964;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	29683	30957	.	-	.	ID=gene-STY7866_RS01035;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=STY7866_RS01035
NZ_CAAR01000033.1	Protein Homology	CDS	29683	30957	.	-	0	ID=cds-WP_000168626.1;Parent=gene-STY7866_RS01035;Dbxref=Genbank:WP_000168626.1;Name=WP_000168626.1;gbkey=CDS;gene=tyrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456081.1;locus_tag=STY7866_RS01035;product=tyrosine--tRNA ligase;protein_id=WP_000168626.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	31084	31740	.	-	.	ID=gene-STY7866_RS01040;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=STY7866_RS01040
NZ_CAAR01000033.1	Protein Homology	CDS	31084	31740	.	-	0	ID=cds-WP_001282834.1;Parent=gene-STY7866_RS01040;Dbxref=Genbank:WP_001282834.1;Name=WP_001282834.1;gbkey=CDS;gene=pdxH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=STY7866_RS01040;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282834.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	pseudogene	31799	32128	.	-	.	ID=gene-STY7866_RS01045;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=pseudogene;locus_tag=STY7866_RS01045;pseudo=true
NZ_CAAR01000033.1	Protein Homology	CDS	31799	32128	.	-	0	ID=cds-STY7866_RS01045;Parent=gene-STY7866_RS01045;Note=internal stop;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=STY7866_RS01045;product=C-type lysozyme inhibitor;pseudo=true;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	32216	33337	.	-	.	ID=gene-STY7866_RS01050;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=STY7866_RS01050
NZ_CAAR01000033.1	Protein Homology	CDS	32216	33337	.	-	0	ID=cds-WP_000835021.1;Parent=gene-STY7866_RS01050;Dbxref=Genbank:WP_000835021.1;Name=WP_000835021.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456084.1;locus_tag=STY7866_RS01050;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835021.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	33610	34077	.	+	.	ID=gene-STY7866_RS01055;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=STY7866_RS01055
NZ_CAAR01000033.1	Protein Homology	CDS	33610	34077	.	+	0	ID=cds-WP_000597179.1;Parent=gene-STY7866_RS01055;Dbxref=Genbank:WP_000597179.1;Name=WP_000597179.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456085.1;locus_tag=STY7866_RS01055;product=outer membrane lipoprotein SlyB;protein_id=WP_000597179.1;transl_table=11
NZ_CAAR01000033.1	RefSeq	gene	34125	34367	.	-	.	ID=gene-STY7866_RS01060;Name=slyA;end_range=34367,.;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=STY7866_RS01060;partial=true
NZ_CAAR01000033.1	Protein Homology	CDS	34125	34367	.	-	0	ID=cds-WP_000308266.1;Parent=gene-STY7866_RS01060;Dbxref=Genbank:WP_000308266.1;Name=WP_000308266.1;end_range=34367,.;gbkey=CDS;gene=slyA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456086.1;locus_tag=STY7866_RS01060;partial=true;product=transcriptional regulator SlyA;protein_id=WP_000308266.1;transl_table=11
##sequence-region NZ_CAAR01000032.1 1 1524
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000032.1	RefSeq	region	1	1524	.	+	.	ID=NZ_CAAR01000032.1:1..1524;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000032.1	RefSeq	pseudogene	1	252	.	+	.	ID=gene-STY7866_RS00875;Name=STY7866_RS00875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00875;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000032.1	Protein Homology	CDS	1	252	.	+	0	ID=cds-STY7866_RS00875;Parent=gene-STY7866_RS00875;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457882.1;locus_tag=STY7866_RS00875;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000032.1	RefSeq	gene	252	845	.	+	.	ID=gene-STY7866_RS00880;Name=STY7866_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00880
NZ_CAAR01000032.1	Protein Homology	CDS	252	845	.	+	0	ID=cds-WP_000805568.1;Parent=gene-STY7866_RS00880;Dbxref=Genbank:WP_000805568.1;Name=WP_000805568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457883.1;locus_tag=STY7866_RS00880;product=tail assembly protein;protein_id=WP_000805568.1;transl_table=11
NZ_CAAR01000032.1	RefSeq	gene	817	1257	.	-	.	ID=gene-STY7866_RS00885;Name=STY7866_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00885
NZ_CAAR01000032.1	Protein Homology	CDS	817	1257	.	-	0	ID=cds-WP_001174915.1;Parent=gene-STY7866_RS00885;Dbxref=Genbank:WP_001174915.1;Name=WP_001174915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457884.1;locus_tag=STY7866_RS00885;product=tail fiber assembly protein;protein_id=WP_001174915.1;transl_table=11
##sequence-region NZ_CAAR01000031.1 1 668
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000031.1	RefSeq	region	1	668	.	+	.	ID=NZ_CAAR01000031.1:1..668;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000031.1	RefSeq	gene	165	347	.	-	.	ID=gene-STY7866_RS26745;Name=STY7866_RS26745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26745
NZ_CAAR01000031.1	Protein Homology	CDS	165	347	.	-	0	ID=cds-WP_071525173.1;Parent=gene-STY7866_RS26745;Dbxref=Genbank:WP_071525173.1;Name=WP_071525173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530982.1;locus_tag=STY7866_RS26745;product=hypothetical protein;protein_id=WP_071525173.1;transl_table=11
##sequence-region NZ_CAAR01000030.1 1 7888
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000030.1	RefSeq	region	1	7888	.	+	.	ID=NZ_CAAR01000030.1:1..7888;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000030.1	RefSeq	gene	1	185	.	-	.	ID=gene-STY7866_RS00830;Name=STY7866_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00830;partial=true;start_range=.,1
NZ_CAAR01000030.1	Protein Homology	CDS	1	185	.	-	0	ID=cds-WP_001787161.1;Parent=gene-STY7866_RS00830;Dbxref=Genbank:WP_001787161.1;Name=WP_001787161.1;Note=in E. coli K-12 this is in prophage P2 remnant;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457164.1;locus_tag=STY7866_RS00830;partial=true;product=bacteriophage late gene regulator;protein_id=WP_001787161.1;start_range=.,1;transl_table=11
NZ_CAAR01000030.1	RefSeq	gene	276	1376	.	-	.	ID=gene-STY7866_RS00835;Name=STY7866_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00835
NZ_CAAR01000030.1	Protein Homology	CDS	276	1376	.	-	0	ID=cds-WP_001011760.1;Parent=gene-STY7866_RS00835;Dbxref=Genbank:WP_001011760.1;Name=WP_001011760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457165.1;locus_tag=STY7866_RS00835;product=phage late control D family protein;protein_id=WP_001011760.1;transl_table=11
NZ_CAAR01000030.1	RefSeq	gene	1373	1858	.	-	.	ID=gene-STY7866_RS00840;Name=STY7866_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00840
NZ_CAAR01000030.1	Protein Homology	CDS	1373	1858	.	-	0	ID=cds-WP_000980380.1;Parent=gene-STY7866_RS00840;Dbxref=Genbank:WP_000980380.1;Name=WP_000980380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457166.1;locus_tag=STY7866_RS00840;product=phage tail protein;protein_id=WP_000980380.1;transl_table=11
NZ_CAAR01000030.1	RefSeq	gene	1855	4932	.	-	.	ID=gene-STY7866_RS00845;Name=STY7866_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00845
NZ_CAAR01000030.1	Protein Homology	CDS	1855	4932	.	-	0	ID=cds-WP_001282796.1;Parent=gene-STY7866_RS00845;Dbxref=Genbank:WP_001282796.1;Name=WP_001282796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457167.1;locus_tag=STY7866_RS00845;product=phage tail tape measure protein;protein_id=WP_001282796.1;transl_table=11
NZ_CAAR01000030.1	RefSeq	gene	4925	5044	.	-	.	ID=gene-STY7866_RS00850;Name=STY7866_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00850
NZ_CAAR01000030.1	Protein Homology	CDS	4925	5044	.	-	0	ID=cds-WP_000763311.1;Parent=gene-STY7866_RS00850;Dbxref=Genbank:WP_000763311.1;Name=WP_000763311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457168.1;locus_tag=STY7866_RS00850;product=GpE family phage tail protein;protein_id=WP_000763311.1;transl_table=11
NZ_CAAR01000030.1	RefSeq	gene	5059	5361	.	-	.	ID=gene-STY7866_RS00855;Name=STY7866_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00855
NZ_CAAR01000030.1	Protein Homology	CDS	5059	5361	.	-	0	ID=cds-WP_001280897.1;Parent=gene-STY7866_RS00855;Dbxref=Genbank:WP_001280897.1;Name=WP_001280897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457169.1;locus_tag=STY7866_RS00855;product=phage tail assembly protein;protein_id=WP_001280897.1;transl_table=11
NZ_CAAR01000030.1	RefSeq	gene	5416	5931	.	-	.	ID=gene-STY7866_RS00860;Name=STY7866_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00860
NZ_CAAR01000030.1	Protein Homology	CDS	5416	5931	.	-	0	ID=cds-WP_001207656.1;Parent=gene-STY7866_RS00860;Dbxref=Genbank:WP_001207656.1;Name=WP_001207656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457170.1;locus_tag=STY7866_RS00860;product=phage major tail tube protein;protein_id=WP_001207656.1;transl_table=11
NZ_CAAR01000030.1	RefSeq	gene	5941	7113	.	-	.	ID=gene-STY7866_RS00865;Name=STY7866_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00865
NZ_CAAR01000030.1	Protein Homology	CDS	5941	7113	.	-	0	ID=cds-WP_000046142.1;Parent=gene-STY7866_RS00865;Dbxref=Genbank:WP_000046142.1;Name=WP_000046142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457171.1;locus_tag=STY7866_RS00865;product=phage tail sheath protein;protein_id=WP_000046142.1;transl_table=11
NZ_CAAR01000030.1	RefSeq	gene	7256	7822	.	-	.	ID=gene-STY7866_RS00870;Name=STY7866_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00870
NZ_CAAR01000030.1	Protein Homology	CDS	7256	7822	.	-	0	ID=cds-WP_000905046.1;Parent=gene-STY7866_RS00870;Dbxref=Genbank:WP_000905046.1;Name=WP_000905046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457886.1;locus_tag=STY7866_RS00870;product=recombinase family protein;protein_id=WP_000905046.1;transl_table=11
##sequence-region NZ_CAAR01000029.1 1 498
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000029.1	RefSeq	region	1	498	.	+	.	ID=NZ_CAAR01000029.1:1..498;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000029.1	RefSeq	gene	1	451	.	-	.	ID=gene-STY7866_RS00825;Name=STY7866_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00825;partial=true;start_range=.,1
NZ_CAAR01000029.1	Protein Homology	CDS	1	451	.	-	0	ID=cds-WP_000673538.1;Parent=gene-STY7866_RS00825;Dbxref=Genbank:WP_000673538.1;Name=WP_000673538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458705.1;locus_tag=STY7866_RS00825;partial=true;product=head completion/stabilization protein;protein_id=WP_000673538.1;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000028.1 1 404
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000028.1	RefSeq	region	1	404	.	+	.	ID=NZ_CAAR01000028.1:1..404;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000028.1	RefSeq	pseudogene	1	269	.	-	.	ID=gene-STY7866_RS00820;Name=STY7866_RS00820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00820;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000028.1	Protein Homology	CDS	1	269	.	-	0	ID=cds-STY7866_RS00820;Parent=gene-STY7866_RS00820;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457868.1;locus_tag=STY7866_RS00820;partial=true;product=major capsid protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000028.1	RefSeq	gene	286	404	.	-	.	ID=gene-STY7866_RS26740;Name=STY7866_RS26740;end_range=404,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26740;partial=true
NZ_CAAR01000028.1	Protein Homology	CDS	286	404	.	-	2	ID=cds-WP_001763829.1;Parent=gene-STY7866_RS26740;Dbxref=Genbank:WP_001763829.1;Name=WP_001763829.1;end_range=404,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457867.1;locus_tag=STY7866_RS26740;partial=true;product=hypothetical protein;protein_id=WP_001763829.1;transl_table=11
##sequence-region NZ_CAAR01000027.1 1 4376
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000027.1	RefSeq	region	1	4376	.	+	.	ID=NZ_CAAR01000027.1:1..4376;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000027.1	RefSeq	pseudogene	1	371	.	+	.	ID=gene-STY7866_RS26350;Name=STY7866_RS26350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26350;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000027.1	Protein Homology	CDS	1	371	.	+	2	ID=cds-STY7866_RS26350;Parent=gene-STY7866_RS26350;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458715.1;locus_tag=STY7866_RS26350;partial=true;product=replication endonuclease;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000027.1	RefSeq	gene	539	727	.	+	.	ID=gene-STY7866_RS00785;Name=STY7866_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00785
NZ_CAAR01000027.1	Protein Homology	CDS	539	727	.	+	0	ID=cds-WP_001154438.1;Parent=gene-STY7866_RS00785;Dbxref=Genbank:WP_001154438.1;Name=WP_001154438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457860.1;locus_tag=STY7866_RS00785;product=hypothetical protein;protein_id=WP_001154438.1;transl_table=11
NZ_CAAR01000027.1	RefSeq	gene	739	972	.	+	.	ID=gene-STY7866_RS00790;Name=STY7866_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00790
NZ_CAAR01000027.1	Protein Homology	CDS	739	972	.	+	0	ID=cds-WP_001217561.1;Parent=gene-STY7866_RS00790;Dbxref=Genbank:WP_001217561.1;Name=WP_001217561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001217566.1;locus_tag=STY7866_RS00790;product=DinI family protein;protein_id=WP_001217561.1;transl_table=11
NZ_CAAR01000027.1	RefSeq	gene	1068	1286	.	+	.	ID=gene-STY7866_RS00795;Name=STY7866_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00795
NZ_CAAR01000027.1	Protein Homology	CDS	1068	1286	.	+	0	ID=cds-WP_000835188.1;Parent=gene-STY7866_RS00795;Dbxref=Genbank:WP_000835188.1;Name=WP_000835188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000835187.1;locus_tag=STY7866_RS00795;product=hypothetical protein;protein_id=WP_000835188.1;transl_table=11
NZ_CAAR01000027.1	RefSeq	gene	1296	2360	.	+	.	ID=gene-STY7866_RS00800;Name=STY7866_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00800
NZ_CAAR01000027.1	Protein Homology	CDS	1296	2360	.	+	0	ID=cds-WP_000829584.1;Parent=gene-STY7866_RS00800;Dbxref=Genbank:WP_000829584.1;Name=WP_000829584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829584.1;locus_tag=STY7866_RS00800;product=hypothetical protein;protein_id=WP_000829584.1;transl_table=11
NZ_CAAR01000027.1	RefSeq	gene	2357	3421	.	+	.	ID=gene-STY7866_RS00805;Name=STY7866_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00805
NZ_CAAR01000027.1	Protein Homology	CDS	2357	3421	.	+	0	ID=cds-WP_000789323.1;Parent=gene-STY7866_RS00805;Dbxref=Genbank:WP_000789323.1;Name=WP_000789323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458712.1;locus_tag=STY7866_RS00805;product=hypothetical protein;protein_id=WP_000789323.1;transl_table=11
NZ_CAAR01000027.1	RefSeq	gene	3441	4136	.	+	.	ID=gene-STY7866_RS00810;Name=STY7866_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00810
NZ_CAAR01000027.1	Protein Homology	CDS	3441	4136	.	+	0	ID=cds-WP_000080839.1;Parent=gene-STY7866_RS00810;Dbxref=Genbank:WP_000080839.1;Name=WP_000080839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080840.1;locus_tag=STY7866_RS00810;product=hypothetical protein;protein_id=WP_000080839.1;transl_table=11
NZ_CAAR01000027.1	RefSeq	pseudogene	4185	4376	.	-	.	ID=gene-STY7866_RS26735;Name=STY7866_RS26735;end_range=4376,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26735;partial=true;pseudo=true
NZ_CAAR01000027.1	Protein Homology	CDS	4185	4376	.	-	0	ID=cds-STY7866_RS26735;Parent=gene-STY7866_RS26735;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4376,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458710.1;locus_tag=STY7866_RS26735;partial=true;product=capsid portal protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000026.1 1 3488
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000026.1	RefSeq	region	1	3488	.	+	.	ID=NZ_CAAR01000026.1:1..3488;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000026.1	RefSeq	gene	1	2038	.	-	.	ID=gene-STY7866_RS00765;Name=STY7866_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00765;partial=true;start_range=.,1
NZ_CAAR01000026.1	Protein Homology	CDS	1	2038	.	-	0	ID=cds-WP_000301192.1;Parent=gene-STY7866_RS00765;Dbxref=Genbank:WP_000301192.1;Name=WP_000301192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458715.1;locus_tag=STY7866_RS00765;partial=true;product=replication endonuclease;protein_id=WP_000301192.1;start_range=.,1;transl_table=11
NZ_CAAR01000026.1	RefSeq	pseudogene	2029	2889	.	-	.	ID=gene-STY7866_RS00770;Name=STY7866_RS00770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00770;pseudo=true
NZ_CAAR01000026.1	Protein Homology	CDS	2029	2889	.	-	0	ID=cds-STY7866_RS00770;Parent=gene-STY7866_RS00770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458716.1;locus_tag=STY7866_RS00770;product=DNA adenine methylase;pseudo=true;transl_table=11
NZ_CAAR01000026.1	RefSeq	gene	2886	3470	.	-	.	ID=gene-STY7866_RS00775;Name=STY7866_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00775
NZ_CAAR01000026.1	Protein Homology	CDS	2886	3470	.	-	0	ID=cds-WP_001090717.1;Parent=gene-STY7866_RS00775;Dbxref=Genbank:WP_001090717.1;Name=WP_001090717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458717.1;locus_tag=STY7866_RS00775;product=3'-5' exonuclease;protein_id=WP_001090717.1;transl_table=11
##sequence-region NZ_CAAR01000025.1 1 5559
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000025.1	RefSeq	region	1	5559	.	+	.	ID=NZ_CAAR01000025.1:1..5559;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000025.1	RefSeq	gene	46	279	.	+	.	ID=gene-STY7866_RS00730;Name=STY7866_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00730
NZ_CAAR01000025.1	Protein Homology	CDS	46	279	.	+	0	ID=cds-WP_001135377.1;Parent=gene-STY7866_RS00730;Dbxref=Genbank:WP_001135377.1;Name=WP_001135377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135372.1;locus_tag=STY7866_RS00730;product=type I addiction module toxin%2C SymE family;protein_id=WP_001135377.1;transl_table=11
NZ_CAAR01000025.1	RefSeq	gene	349	837	.	-	.	ID=gene-STY7866_RS00735;Name=STY7866_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00735
NZ_CAAR01000025.1	Protein Homology	CDS	349	837	.	-	0	ID=cds-WP_049783540.1;Parent=gene-STY7866_RS00735;Dbxref=Genbank:WP_049783540.1;Name=WP_049783540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000437847.1;locus_tag=STY7866_RS00735;product=SMI1/KNR4 family protein;protein_id=WP_049783540.1;transl_table=11
NZ_CAAR01000025.1	RefSeq	pseudogene	1135	3664	.	-	.	ID=gene-STY7866_RS00745;Name=STY7866_RS00745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00745;pseudo=true
NZ_CAAR01000025.1	Protein Homology	CDS	1135	3664	.	-	0	ID=cds-STY7866_RS00745;Parent=gene-STY7866_RS00745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454901.1;locus_tag=STY7866_RS00745;product=RHS repeat protein;pseudo=true;transl_table=11
NZ_CAAR01000025.1	RefSeq	gene	3703	4026	.	+	.	ID=gene-STY7866_RS00750;Name=STY7866_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00750
NZ_CAAR01000025.1	Protein Homology	CDS	3703	4026	.	+	0	ID=cds-WP_072073180.1;Parent=gene-STY7866_RS00750;Dbxref=Genbank:WP_072073180.1;Name=WP_072073180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001651551.1;locus_tag=STY7866_RS00750;product=type I toxin-antitoxin system SymE family toxin;protein_id=WP_072073180.1;transl_table=11
NZ_CAAR01000025.1	RefSeq	pseudogene	4072	4748	.	-	.	ID=gene-STY7866_RS00755;Name=STY7866_RS00755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00755;pseudo=true
NZ_CAAR01000025.1	Protein Homology	CDS	4072	4748	.	-	0	ID=cds-STY7866_RS00755;Parent=gene-STY7866_RS00755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000875616.1;locus_tag=STY7866_RS00755;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000025.1	RefSeq	pseudogene	4751	5559	.	-	.	ID=gene-STY7866_RS26730;Name=STY7866_RS26730;end_range=5559,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26730;partial=true;pseudo=true
NZ_CAAR01000025.1	Protein Homology	CDS	4751	5559	.	-	2	ID=cds-STY7866_RS26730;Parent=gene-STY7866_RS26730;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5559,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454898.1;locus_tag=STY7866_RS26730;partial=true;product=RHS repeat protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000024.1 1 4174
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000024.1	RefSeq	region	1	4174	.	+	.	ID=NZ_CAAR01000024.1:1..4174;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000024.1	RefSeq	gene	120	314	.	+	.	ID=gene-STY7866_RS26725;Name=STY7866_RS26725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26725
NZ_CAAR01000024.1	Protein Homology	CDS	120	314	.	+	0	ID=cds-WP_071524981.1;Parent=gene-STY7866_RS26725;Dbxref=Genbank:WP_071524981.1;Name=WP_071524981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012532524.1;locus_tag=STY7866_RS26725;product=hypothetical protein;protein_id=WP_071524981.1;transl_table=11
NZ_CAAR01000024.1	RefSeq	gene	778	1395	.	-	.	ID=gene-STY7866_RS00710;Name=STY7866_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00710
NZ_CAAR01000024.1	Protein Homology	CDS	778	1395	.	-	0	ID=cds-WP_000241754.1;Parent=gene-STY7866_RS00710;Dbxref=Genbank:WP_000241754.1;Name=WP_000241754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539141.1;locus_tag=STY7866_RS00710;product=hypothetical protein;protein_id=WP_000241754.1;transl_table=11
NZ_CAAR01000024.1	RefSeq	gene	1535	1990	.	-	.	ID=gene-STY7866_RS00715;Name=STY7866_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00715
NZ_CAAR01000024.1	Protein Homology	CDS	1535	1990	.	-	0	ID=cds-WP_000219487.1;Parent=gene-STY7866_RS00715;Dbxref=Genbank:WP_000219487.1;Name=WP_000219487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454916.1;locus_tag=STY7866_RS00715;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_000219487.1;transl_table=11
NZ_CAAR01000024.1	RefSeq	pseudogene	2123	3201	.	-	.	ID=gene-STY7866_RS00720;Name=tcfD;gbkey=Gene;gene=tcfD;gene_biotype=pseudogene;locus_tag=STY7866_RS00720;pseudo=true
NZ_CAAR01000024.1	Protein Homology	CDS	2123	3201	.	-	0	ID=cds-STY7866_RS00720;Parent=gene-STY7866_RS00720;Note=frameshifted;gbkey=CDS;gene=tcfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454915.1;locus_tag=STY7866_RS00720;product=fimbrial protein TcfD;pseudo=true;transl_table=11
NZ_CAAR01000024.1	RefSeq	pseudogene	3224	4174	.	-	.	ID=gene-STY7866_RS00725;Name=STY7866_RS00725;end_range=4174,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00725;partial=true;pseudo=true
NZ_CAAR01000024.1	Protein Homology	CDS	3224	4174	.	-	0	ID=cds-STY7866_RS00725;Parent=gene-STY7866_RS00725;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4174,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454914.1;locus_tag=STY7866_RS00725;partial=true;product=fimbrial assembly protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000023.1 1 2047
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000023.1	RefSeq	region	1	2047	.	+	.	ID=NZ_CAAR01000023.1:1..2047;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000023.1	RefSeq	gene	154	1101	.	-	.	ID=gene-STY7866_RS00695;Name=STY7866_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00695
NZ_CAAR01000023.1	Protein Homology	CDS	154	1101	.	-	0	ID=cds-WP_000970303.1;Parent=gene-STY7866_RS00695;Dbxref=Genbank:WP_000970303.1;Name=WP_000970303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=STY7866_RS00695;product=LysR family transcriptional regulator;protein_id=WP_000970303.1;transl_table=11
NZ_CAAR01000023.1	RefSeq	gene	1576	1836	.	-	.	ID=gene-STY7866_RS00705;Name=STY7866_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00705
NZ_CAAR01000023.1	Protein Homology	CDS	1576	1836	.	-	0	ID=cds-WP_001538164.1;Parent=gene-STY7866_RS00705;Dbxref=Genbank:WP_001538164.1;Name=WP_001538164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008991977.1;locus_tag=STY7866_RS00705;product=PerC family transcriptional regulator;protein_id=WP_001538164.1;transl_table=11
NZ_CAAR01000023.1	RefSeq	pseudogene	1916	2047	.	-	.	ID=gene-STY7866_RS26720;Name=STY7866_RS26720;end_range=2047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26720;partial=true;pseudo=true
NZ_CAAR01000023.1	Protein Homology	CDS	1916	2047	.	-	0	ID=cds-STY7866_RS26720;Parent=gene-STY7866_RS26720;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454909.1;locus_tag=STY7866_RS26720;partial=true;product=carbohydrate transporter;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000022.1 1 11544
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000022.1	RefSeq	region	1	11544	.	+	.	ID=NZ_CAAR01000022.1:1..11544;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000022.1	RefSeq	pseudogene	1	146	.	-	.	ID=gene-STY7866_RS00625;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=pseudogene;locus_tag=STY7866_RS00625;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000022.1	Protein Homology	CDS	1	146	.	-	0	ID=cds-STY7866_RS00625;Parent=gene-STY7866_RS00625;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456130.1;locus_tag=STY7866_RS00625;partial=true;product=SPI-2 type III secretion system translocon protein SseB;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000022.1	RefSeq	gene	153	479	.	-	.	ID=gene-STY7866_RS00630;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=STY7866_RS00630
NZ_CAAR01000022.1	Protein Homology	CDS	153	479	.	-	0	ID=cds-WP_000972855.1;Parent=gene-STY7866_RS00630;Dbxref=Genbank:WP_000972855.1;Name=WP_000972855.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456131.1;locus_tag=STY7866_RS00630;product=SPI-2 type III secretion system chaperone SseA;protein_id=WP_000972855.1;transl_table=11
NZ_CAAR01000022.1	RefSeq	gene	682	924	.	-	.	ID=gene-STY7866_RS00635;Name=STY7866_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00635
NZ_CAAR01000022.1	Protein Homology	CDS	682	924	.	-	0	ID=cds-WP_000210204.1;Parent=gene-STY7866_RS00635;Dbxref=Genbank:WP_000210204.1;Name=WP_000210204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456132.1;locus_tag=STY7866_RS00635;product=type III secretion system chaperone SsaE;protein_id=WP_000210204.1;transl_table=11
NZ_CAAR01000022.1	RefSeq	pseudogene	932	2144	.	-	.	ID=gene-STY7866_RS00640;Name=STY7866_RS00640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00640;pseudo=true
NZ_CAAR01000022.1	Protein Homology	CDS	932	2144	.	-	0	ID=cds-STY7866_RS00640;Parent=gene-STY7866_RS00640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456133.1;locus_tag=STY7866_RS00640;product=EscD/YscD/HrpQ family type III secretion system inner membrane ring protein;pseudo=true;transl_table=11
NZ_CAAR01000022.1	RefSeq	gene	2125	3618	.	-	.	ID=gene-STY7866_RS00645;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=STY7866_RS00645
NZ_CAAR01000022.1	Protein Homology	CDS	2125	3618	.	-	0	ID=cds-WP_000261287.1;Parent=gene-STY7866_RS00645;Dbxref=Genbank:WP_000261287.1;Name=WP_000261287.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456134.1;locus_tag=STY7866_RS00645;product=SPI-2 type III secretion system protein SpiA;protein_id=WP_000261287.1;transl_table=11
NZ_CAAR01000022.1	RefSeq	gene	3620	4021	.	-	.	ID=gene-STY7866_RS00650;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=STY7866_RS00650
NZ_CAAR01000022.1	Protein Homology	CDS	3620	4021	.	-	0	ID=cds-WP_001738217.1;Parent=gene-STY7866_RS00650;Dbxref=Genbank:WP_001738217.1;Name=WP_001738217.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=STY7866_RS00650;product=SPI-2 type III secretion system protein SpiC;protein_id=WP_001738217.1;transl_table=11
NZ_CAAR01000022.1	RefSeq	gene	4422	7184	.	+	.	ID=gene-STY7866_RS00655;Name=STY7866_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00655
NZ_CAAR01000022.1	Protein Homology	CDS	4422	7184	.	+	0	ID=cds-WP_001050755.1;Parent=gene-STY7866_RS00655;Dbxref=Genbank:WP_001050755.1;Name=WP_001050755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456136.1;locus_tag=STY7866_RS00655;product=two component system sensor kinase;protein_id=WP_001050755.1;transl_table=11
NZ_CAAR01000022.1	RefSeq	gene	7215	7853	.	+	.	ID=gene-STY7866_RS00660;Name=STY7866_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00660
NZ_CAAR01000022.1	Protein Homology	CDS	7215	7853	.	+	0	ID=cds-WP_000666335.1;Parent=gene-STY7866_RS00660;Dbxref=Genbank:WP_000666335.1;Name=WP_000666335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456137.1;locus_tag=STY7866_RS00660;product=two component system response regulator;protein_id=WP_000666335.1;transl_table=11
NZ_CAAR01000022.1	RefSeq	gene	8032	8760	.	+	.	ID=gene-STY7866_RS00670;Name=STY7866_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00670
NZ_CAAR01000022.1	Protein Homology	CDS	8032	8760	.	+	0	ID=cds-WP_000122320.1;Parent=gene-STY7866_RS00670;Dbxref=Genbank:WP_000122320.1;Name=WP_000122320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456138.1;locus_tag=STY7866_RS00670;product=MerR family transcriptional regulator;protein_id=WP_000122320.1;transl_table=11
NZ_CAAR01000022.1	RefSeq	gene	8932	9891	.	+	.	ID=gene-STY7866_RS00675;Name=STY7866_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00675
NZ_CAAR01000022.1	Protein Homology	CDS	8932	9891	.	+	0	ID=cds-WP_001060717.1;Parent=gene-STY7866_RS00675;Dbxref=Genbank:WP_001060717.1;Name=WP_001060717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456139.1;locus_tag=STY7866_RS00675;product=DUF523 and DUF1722 domain-containing protein;protein_id=WP_001060717.1;transl_table=11
NZ_CAAR01000022.1	RefSeq	gene	9987	10199	.	-	.	ID=gene-STY7866_RS00680;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=STY7866_RS00680
NZ_CAAR01000022.1	Protein Homology	CDS	9987	10199	.	-	0	ID=cds-WP_000165779.1;Parent=gene-STY7866_RS00680;Dbxref=Genbank:WP_000165779.1;Name=WP_000165779.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456140.1;locus_tag=STY7866_RS00680;product=fumarate hydratase FumD;protein_id=WP_000165779.1;transl_table=11
NZ_CAAR01000022.1	RefSeq	gene	10297	10917	.	-	.	ID=gene-STY7866_RS00685;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=STY7866_RS00685
NZ_CAAR01000022.1	Protein Homology	CDS	10297	10917	.	-	0	ID=cds-WP_000190927.1;Parent=gene-STY7866_RS00685;Dbxref=Genbank:WP_000190927.1;Name=WP_000190927.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456141.1;locus_tag=STY7866_RS00685;product=two-component system response regulator TtrR;protein_id=WP_000190927.1;transl_table=11
NZ_CAAR01000022.1	RefSeq	pseudogene	10892	11544	.	-	.	ID=gene-STY7866_RS00690;Name=ttrS;end_range=11544,.;gbkey=Gene;gene=ttrS;gene_biotype=pseudogene;locus_tag=STY7866_RS00690;partial=true;pseudo=true
NZ_CAAR01000022.1	Protein Homology	CDS	10892	11544	.	-	2	ID=cds-STY7866_RS00690;Parent=gene-STY7866_RS00690;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=11544,.;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=STY7866_RS00690;partial=true;product=two-component system sensor histidine kinase TtrS;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000021.1 1 153
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000021.1	RefSeq	region	1	153	.	+	.	ID=NZ_CAAR01000021.1:1..153;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
##sequence-region NZ_CAAR01000020.1 1 1783
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000020.1	RefSeq	region	1	1783	.	+	.	ID=NZ_CAAR01000020.1:1..1783;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000020.1	RefSeq	gene	6	1304	.	-	.	ID=gene-STY7866_RS00615;Name=STY7866_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00615
NZ_CAAR01000020.1	Protein Homology	CDS	6	1304	.	-	0	ID=cds-WP_000673295.1;Parent=gene-STY7866_RS00615;Dbxref=Genbank:WP_000673295.1;Name=WP_000673295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457012.1;locus_tag=STY7866_RS00615;product=penicillin binding protein PBP4B;protein_id=WP_000673295.1;transl_table=11
NZ_CAAR01000020.1	RefSeq	pseudogene	1508	1783	.	+	.	ID=gene-STY7866_RS00620;Name=STY7866_RS00620;end_range=1783,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00620;partial=true;pseudo=true
NZ_CAAR01000020.1	Protein Homology	CDS	1508	1783	.	+	0	ID=cds-STY7866_RS00620;Parent=gene-STY7866_RS00620;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1783,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457011.1;locus_tag=STY7866_RS00620;partial=true;product=GDP-mannose pyrophosphatase NudK;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000019.1 1 3109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000019.1	RefSeq	region	1	3109	.	+	.	ID=NZ_CAAR01000019.1:1..3109;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000019.1	RefSeq	gene	1	1297	.	-	.	ID=gene-STY7866_RS00595;Name=STY7866_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00595;partial=true;start_range=.,1
NZ_CAAR01000019.1	Protein Homology	CDS	1	1297	.	-	0	ID=cds-WP_001150177.1;Parent=gene-STY7866_RS00595;Dbxref=Genbank:WP_001150177.1;Name=WP_001150177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458294.1;locus_tag=STY7866_RS00595;partial=true;product=transporter;protein_id=WP_001150177.1;start_range=.,1;transl_table=11
NZ_CAAR01000019.1	RefSeq	pseudogene	1415	1812	.	-	.	ID=gene-STY7866_RS26715;Name=STY7866_RS26715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26715;pseudo=true
NZ_CAAR01000019.1	Protein Homology	CDS	1415	1812	.	-	0	ID=cds-STY7866_RS26715;Parent=gene-STY7866_RS26715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006793643.1;locus_tag=STY7866_RS26715;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000019.1	RefSeq	gene	1940	2047	.	+	.	ID=gene-STY7866_RS00605;Name=STY7866_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00605
NZ_CAAR01000019.1	Protein Homology	CDS	1940	2047	.	+	0	ID=cds-WP_001537650.1;Parent=gene-STY7866_RS00605;Dbxref=Genbank:WP_001537650.1;Name=WP_001537650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=STY7866_RS00605;product=hypothetical protein;protein_id=WP_001537650.1;transl_table=11
NZ_CAAR01000019.1	RefSeq	gene	2129	3109	.	-	.	ID=gene-STY7866_RS00610;Name=bcsG;end_range=3109,.;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=STY7866_RS00610;partial=true
NZ_CAAR01000019.1	Protein Homology	CDS	2129	3109	.	-	0	ID=cds-WP_000296829.1;Parent=gene-STY7866_RS00610;Dbxref=Genbank:WP_000296829.1;Name=WP_000296829.1;end_range=3109,.;gbkey=CDS;gene=bcsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458296.1;locus_tag=STY7866_RS00610;partial=true;product=cellulose biosynthesis protein BcsG;protein_id=WP_000296829.1;transl_table=11
##sequence-region NZ_CAAR01000018.1 1 4768
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000018.1	RefSeq	region	1	4768	.	+	.	ID=NZ_CAAR01000018.1:1..4768;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000018.1	RefSeq	gene	1	691	.	-	.	ID=gene-STY7866_RS00565;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=STY7866_RS00565;partial=true;start_range=.,1
NZ_CAAR01000018.1	Protein Homology	CDS	1	691	.	-	0	ID=cds-WP_000983125.1;Parent=gene-STY7866_RS00565;Dbxref=Genbank:WP_000983125.1;Name=WP_000983125.1;gbkey=CDS;gene=zipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456965.1;locus_tag=STY7866_RS00565;partial=true;product=cell division protein ZipA;protein_id=WP_000983125.1;start_range=.,1;transl_table=11
NZ_CAAR01000018.1	RefSeq	gene	923	1684	.	+	.	ID=gene-STY7866_RS00570;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=STY7866_RS00570
NZ_CAAR01000018.1	Protein Homology	CDS	923	1684	.	+	0	ID=cds-WP_000255008.1;Parent=gene-STY7866_RS00570;Dbxref=Genbank:WP_000255008.1;Name=WP_000255008.1;gbkey=CDS;gene=cysZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456966.1;locus_tag=STY7866_RS00570;product=sulfate transporter CysZ;protein_id=WP_000255008.1;transl_table=11
NZ_CAAR01000018.1	RefSeq	gene	2057	3028	.	+	.	ID=gene-STY7866_RS00575;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=STY7866_RS00575
NZ_CAAR01000018.1	Protein Homology	CDS	2057	3028	.	+	0	ID=cds-WP_000036904.1;Parent=gene-STY7866_RS00575;Dbxref=Genbank:WP_000036904.1;Name=WP_000036904.1;gbkey=CDS;gene=cysK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=STY7866_RS00575;product=cysteine synthase A;protein_id=WP_000036904.1;transl_table=11
NZ_CAAR01000018.1	RefSeq	gene	3412	3669	.	+	.	ID=gene-STY7866_RS00585;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=STY7866_RS00585
NZ_CAAR01000018.1	Protein Homology	CDS	3412	3669	.	+	0	ID=cds-WP_000487600.1;Parent=gene-STY7866_RS00585;Dbxref=Genbank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=STY7866_RS00585;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11
NZ_CAAR01000018.1	RefSeq	gene	3718	4768	.	+	.	ID=gene-STY7866_RS00590;Name=ptsP;end_range=4768,.;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=STY7866_RS00590;partial=true
NZ_CAAR01000018.1	Protein Homology	CDS	3718	4768	.	+	0	ID=cds-WP_000623112.1;Parent=gene-STY7866_RS00590;Dbxref=Genbank:WP_000623112.1;Name=WP_000623112.1;end_range=4768,.;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=STY7866_RS00590;partial=true;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000623112.1;transl_table=11
##sequence-region NZ_CAAR01000017.1 1 7516
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000017.1	RefSeq	region	1	7516	.	+	.	ID=NZ_CAAR01000017.1:1..7516;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000017.1	RefSeq	gene	232	2193	.	-	.	ID=gene-STY7866_RS00550;Name=STY7866_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00550
NZ_CAAR01000017.1	Protein Homology	CDS	232	2193	.	-	0	ID=cds-WP_001078925.1;Parent=gene-STY7866_RS00550;Dbxref=Genbank:WP_001078925.1;Name=WP_001078925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=STY7866_RS00550;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_001078925.1;transl_table=11
NZ_CAAR01000017.1	RefSeq	gene	2432	4078	.	+	.	ID=gene-STY7866_RS00555;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=STY7866_RS00555
NZ_CAAR01000017.1	Protein Homology	CDS	2432	4078	.	+	0	ID=cds-WP_001763814.1;Parent=gene-STY7866_RS00555;Dbxref=Genbank:WP_001763814.1;Name=WP_001763814.1;gbkey=CDS;gene=narQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574763.1;locus_tag=STY7866_RS00555;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_001763814.1;transl_table=11
NZ_CAAR01000017.1	RefSeq	pseudogene	4263	7395	.	+	.	ID=gene-STY7866_RS00560;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=pseudogene;locus_tag=STY7866_RS00560;pseudo=true
NZ_CAAR01000017.1	Protein Homology	CDS	4263	7395	.	+	0	ID=cds-STY7866_RS00560;Parent=gene-STY7866_RS00560;Note=frameshifted;gbkey=CDS;gene=acrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_115442840.1;locus_tag=STY7866_RS00560;product=multidrug efflux RND transporter permease AcrD;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000016.1 1 2288
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000016.1	RefSeq	region	1	2288	.	+	.	ID=NZ_CAAR01000016.1:1..2288;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000016.1	RefSeq	gene	113	793	.	-	.	ID=gene-STY7866_RS00540;Name=STY7866_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00540
NZ_CAAR01000016.1	Protein Homology	CDS	113	793	.	-	0	ID=cds-WP_000106461.1;Parent=gene-STY7866_RS00540;Dbxref=Genbank:WP_000106461.1;Name=WP_000106461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458172.1;locus_tag=STY7866_RS00540;product=isochorismatase family protein;protein_id=WP_000106461.1;transl_table=11
NZ_CAAR01000016.1	RefSeq	gene	1412	1525	.	+	.	ID=gene-STY7866_RS26710;Name=STY7866_RS26710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26710
NZ_CAAR01000016.1	Protein Homology	CDS	1412	1525	.	+	0	ID=cds-WP_077905080.1;Parent=gene-STY7866_RS26710;Dbxref=Genbank:WP_077905080.1;Name=WP_077905080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453069.1;locus_tag=STY7866_RS26710;product=hypothetical protein;protein_id=WP_077905080.1;transl_table=11
NZ_CAAR01000016.1	RefSeq	pseudogene	1578	2288	.	+	.	ID=gene-STY7866_RS00545;Name=STY7866_RS00545;end_range=2288,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00545;partial=true;pseudo=true
NZ_CAAR01000016.1	Protein Homology	CDS	1578	2288	.	+	0	ID=cds-STY7866_RS00545;Parent=gene-STY7866_RS00545;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;end_range=2288,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=STY7866_RS00545;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000015.1 1 13948
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000015.1	RefSeq	region	1	13948	.	+	.	ID=NZ_CAAR01000015.1:1..13948;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000015.1	RefSeq	gene	1	2151	.	+	.	ID=gene-STY7866_RS00475;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=STY7866_RS00475;partial=true;start_range=.,1
NZ_CAAR01000015.1	Protein Homology	CDS	1	2151	.	+	0	ID=cds-WP_000641520.1;Parent=gene-STY7866_RS00475;Dbxref=Genbank:WP_000641520.1;Name=WP_000641520.1;gbkey=CDS;gene=dagR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=STY7866_RS00475;partial=true;product=transcriptional regulator DagR;protein_id=WP_000641520.1;start_range=.,1;transl_table=11
NZ_CAAR01000015.1	RefSeq	gene	2373	2798	.	+	.	ID=gene-STY7866_RS00480;Name=STY7866_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00480
NZ_CAAR01000015.1	Protein Homology	CDS	2373	2798	.	+	0	ID=cds-WP_000214106.1;Parent=gene-STY7866_RS00480;Dbxref=Genbank:WP_000214106.1;Name=WP_000214106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458162.1;locus_tag=STY7866_RS00480;product=PTS sugar transporter subunit IIA;protein_id=WP_000214106.1;transl_table=11
NZ_CAAR01000015.1	RefSeq	pseudogene	2809	3293	.	+	.	ID=gene-STY7866_RS00485;Name=STY7866_RS00485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00485;pseudo=true
NZ_CAAR01000015.1	Protein Homology	CDS	2809	3293	.	+	0	ID=cds-STY7866_RS00485;Parent=gene-STY7866_RS00485;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458163.1;locus_tag=STY7866_RS00485;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;pseudo=true;transl_table=11
NZ_CAAR01000015.1	RefSeq	gene	3439	4188	.	+	.	ID=gene-STY7866_RS00490;Name=STY7866_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00490
NZ_CAAR01000015.1	Protein Homology	CDS	3439	4188	.	+	0	ID=cds-WP_000380259.1;Parent=gene-STY7866_RS00490;Dbxref=Genbank:WP_000380259.1;Name=WP_000380259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458164.1;locus_tag=STY7866_RS00490;product=PTS sugar transporter subunit IIC;protein_id=WP_000380259.1;transl_table=11
NZ_CAAR01000015.1	RefSeq	gene	4188	5045	.	+	.	ID=gene-STY7866_RS00495;Name=STY7866_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00495
NZ_CAAR01000015.1	Protein Homology	CDS	4188	5045	.	+	0	ID=cds-WP_000093404.1;Parent=gene-STY7866_RS00495;Dbxref=Genbank:WP_000093404.1;Name=WP_000093404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458165.1;locus_tag=STY7866_RS00495;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000093404.1;transl_table=11
NZ_CAAR01000015.1	RefSeq	gene	5049	6158	.	+	.	ID=gene-STY7866_RS00500;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=STY7866_RS00500
NZ_CAAR01000015.1	Protein Homology	CDS	5049	6158	.	+	0	ID=cds-WP_000188469.1;Parent=gene-STY7866_RS00500;Dbxref=Genbank:WP_000188469.1;Name=WP_000188469.1;gbkey=CDS;gene=dgaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458166.1;locus_tag=STY7866_RS00500;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WP_000188469.1;transl_table=11
NZ_CAAR01000015.1	RefSeq	gene	6145	6888	.	+	.	ID=gene-STY7866_RS00505;Name=STY7866_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00505
NZ_CAAR01000015.1	Protein Homology	CDS	6145	6888	.	+	0	ID=cds-WP_001186143.1;Parent=gene-STY7866_RS00505;Dbxref=Genbank:WP_001186143.1;Name=WP_001186143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458167.1;locus_tag=STY7866_RS00505;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_001186143.1;transl_table=11
NZ_CAAR01000015.1	RefSeq	gene	7124	8065	.	+	.	ID=gene-STY7866_RS00510;Name=STY7866_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00510
NZ_CAAR01000015.1	Protein Homology	CDS	7124	8065	.	+	0	ID=cds-WP_000749532.1;Parent=gene-STY7866_RS00510;Dbxref=Genbank:WP_000749532.1;Name=WP_000749532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147726.1;locus_tag=STY7866_RS00510;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000749532.1;transl_table=11
NZ_CAAR01000015.1	RefSeq	gene	8108	9010	.	-	.	ID=gene-STY7866_RS00515;Name=STY7866_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00515
NZ_CAAR01000015.1	Protein Homology	CDS	8108	9010	.	-	0	ID=cds-WP_000535970.1;Parent=gene-STY7866_RS00515;Dbxref=Genbank:WP_000535970.1;Name=WP_000535970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458169.1;locus_tag=STY7866_RS00515;product=EamA family transporter;protein_id=WP_000535970.1;transl_table=11
NZ_CAAR01000015.1	RefSeq	gene	9516	10211	.	+	.	ID=gene-STY7866_RS00520;Name=STY7866_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00520
NZ_CAAR01000015.1	Protein Homology	CDS	9516	10211	.	+	0	ID=cds-WP_000392697.1;Parent=gene-STY7866_RS00520;Dbxref=Genbank:WP_000392697.1;Name=WP_000392697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458170.1;locus_tag=STY7866_RS00520;product=MgtC family protein;protein_id=WP_000392697.1;transl_table=11
NZ_CAAR01000015.1	RefSeq	gene	10431	13157	.	+	.	ID=gene-STY7866_RS00525;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=STY7866_RS00525
NZ_CAAR01000015.1	Protein Homology	CDS	10431	13157	.	+	0	ID=cds-WP_000131278.1;Parent=gene-STY7866_RS00525;Dbxref=Genbank:WP_000131278.1;Name=WP_000131278.1;gbkey=CDS;gene=mgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458171.1;locus_tag=STY7866_RS00525;product=magnesium-translocating P-type ATPase;protein_id=WP_000131278.1;transl_table=11
NZ_CAAR01000015.1	RefSeq	gene	13179	13271	.	+	.	ID=gene-STY7866_RS26705;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=STY7866_RS26705
NZ_CAAR01000015.1	Protein Homology	CDS	13179	13271	.	+	0	ID=cds-WP_001082117.1;Parent=gene-STY7866_RS26705;Dbxref=Genbank:WP_001082117.1;Name=WP_001082117.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=STY7866_RS26705;product=protein MgtR;protein_id=WP_001082117.1;transl_table=11
NZ_CAAR01000015.1	RefSeq	pseudogene	13472	13948	.	+	.	ID=gene-STY7866_RS00535;Name=STY7866_RS00535;end_range=13948,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00535;partial=true;pseudo=true
NZ_CAAR01000015.1	Protein Homology	CDS	13472	13948	.	+	0	ID=cds-STY7866_RS00535;Parent=gene-STY7866_RS00535;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=13948,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=STY7866_RS00535;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000014.1 1 10795
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000014.1	RefSeq	region	1	10795	.	+	.	ID=NZ_CAAR01000014.1:1..10795;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000014.1	RefSeq	gene	31	1164	.	-	.	ID=gene-STY7866_RS00410;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=STY7866_RS00410
NZ_CAAR01000014.1	Protein Homology	CDS	31	1164	.	-	0	ID=cds-WP_000643282.1;Parent=gene-STY7866_RS00410;Dbxref=Genbank:WP_000643282.1;Name=WP_000643282.1;gbkey=CDS;gene=thiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457915.1;locus_tag=STY7866_RS00410;product=2-iminoacetate synthase ThiH;protein_id=WP_000643282.1;transl_table=11
NZ_CAAR01000014.1	RefSeq	gene	1161	1931	.	-	.	ID=gene-STY7866_RS00415;Name=STY7866_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00415
NZ_CAAR01000014.1	Protein Homology	CDS	1161	1931	.	-	0	ID=cds-WP_000944065.1;Parent=gene-STY7866_RS00415;Dbxref=Genbank:WP_000944065.1;Name=WP_000944065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457914.1;locus_tag=STY7866_RS00415;product=thiazole synthase;protein_id=WP_000944065.1;transl_table=11
NZ_CAAR01000014.1	RefSeq	gene	1933	2133	.	-	.	ID=gene-STY7866_RS00420;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=STY7866_RS00420
NZ_CAAR01000014.1	Protein Homology	CDS	1933	2133	.	-	0	ID=cds-WP_001166848.1;Parent=gene-STY7866_RS00420;Dbxref=Genbank:WP_001166848.1;Name=WP_001166848.1;gbkey=CDS;gene=thiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=STY7866_RS00420;product=sulfur carrier protein ThiS;protein_id=WP_001166848.1;transl_table=11
NZ_CAAR01000014.1	RefSeq	gene	2114	2872	.	-	.	ID=gene-STY7866_RS00425;Name=STY7866_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00425
NZ_CAAR01000014.1	Protein Homology	CDS	2114	2872	.	-	0	ID=cds-WP_000999774.1;Parent=gene-STY7866_RS00425;Dbxref=Genbank:WP_000999774.1;Name=WP_000999774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457912.1;locus_tag=STY7866_RS00425;product=HesA/MoeB/ThiF family protein;protein_id=WP_000999774.1;transl_table=11
NZ_CAAR01000014.1	RefSeq	gene	2865	3500	.	-	.	ID=gene-STY7866_RS00430;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=STY7866_RS00430
NZ_CAAR01000014.1	Protein Homology	CDS	2865	3500	.	-	0	ID=cds-WP_000284626.1;Parent=gene-STY7866_RS00430;Dbxref=Genbank:WP_000284626.1;Name=WP_000284626.1;gbkey=CDS;gene=thiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457911.1;locus_tag=STY7866_RS00430;product=thiamine phosphate synthase;protein_id=WP_000284626.1;transl_table=11
NZ_CAAR01000014.1	RefSeq	gene	3500	5395	.	-	.	ID=gene-STY7866_RS00435;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=STY7866_RS00435
NZ_CAAR01000014.1	Protein Homology	CDS	3500	5395	.	-	0	ID=cds-WP_000108425.1;Parent=gene-STY7866_RS00435;Dbxref=Genbank:WP_000108425.1;Name=WP_000108425.1;gbkey=CDS;gene=thiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457910.1;locus_tag=STY7866_RS00435;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_000108425.1;transl_table=11
NZ_CAAR01000014.1	cmsearch	riboswitch	5480	5643	.	-	.	ID=id-NZ_CAAR01000014.1:5480..5643;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_CAAR01000014.1	RefSeq	gene	5758	6246	.	-	.	ID=gene-STY7866_RS00440;Name=STY7866_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00440
NZ_CAAR01000014.1	Protein Homology	CDS	5758	6246	.	-	0	ID=cds-WP_000934311.1;Parent=gene-STY7866_RS00440;Dbxref=Genbank:WP_000934311.1;Name=WP_000934311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457909.1;locus_tag=STY7866_RS00440;product=sigma D regulator;protein_id=WP_000934311.1;transl_table=11
NZ_CAAR01000014.1	RefSeq	gene	6339	7112	.	+	.	ID=gene-STY7866_RS00445;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=STY7866_RS00445
NZ_CAAR01000014.1	Protein Homology	CDS	6339	7112	.	+	0	ID=cds-WP_000373954.1;Parent=gene-STY7866_RS00445;Dbxref=Genbank:WP_000373954.1;Name=WP_000373954.1;gbkey=CDS;gene=nudC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457908.1;locus_tag=STY7866_RS00445;product=NAD(+) diphosphatase;protein_id=WP_000373954.1;transl_table=11
NZ_CAAR01000014.1	RefSeq	gene	7153	8217	.	+	.	ID=gene-STY7866_RS00450;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=STY7866_RS00450
NZ_CAAR01000014.1	Protein Homology	CDS	7153	8217	.	+	0	ID=cds-WP_000137619.1;Parent=gene-STY7866_RS00450;Dbxref=Genbank:WP_000137619.1;Name=WP_000137619.1;gbkey=CDS;gene=hemE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137620.1;locus_tag=STY7866_RS00450;product=uroporphyrinogen decarboxylase;protein_id=WP_000137619.1;transl_table=11
NZ_CAAR01000014.1	RefSeq	gene	8227	8898	.	+	.	ID=gene-STY7866_RS00455;Name=STY7866_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00455
NZ_CAAR01000014.1	Protein Homology	CDS	8227	8898	.	+	0	ID=cds-WP_000362359.1;Parent=gene-STY7866_RS00455;Dbxref=Genbank:WP_000362359.1;Name=WP_000362359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457906.1;locus_tag=STY7866_RS00455;product=deoxyribonuclease V;protein_id=WP_000362359.1;transl_table=11
NZ_CAAR01000014.1	RefSeq	gene	8940	9530	.	+	.	ID=gene-STY7866_RS00460;Name=STY7866_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00460
NZ_CAAR01000014.1	Protein Homology	CDS	8940	9530	.	+	0	ID=cds-WP_000940092.1;Parent=gene-STY7866_RS00460;Dbxref=Genbank:WP_000940092.1;Name=WP_000940092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457905.1;locus_tag=STY7866_RS00460;product=YjaG family protein;protein_id=WP_000940092.1;transl_table=11
NZ_CAAR01000014.1	RefSeq	gene	9717	9989	.	+	.	ID=gene-STY7866_RS00465;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=STY7866_RS00465
NZ_CAAR01000014.1	Protein Homology	CDS	9717	9989	.	+	0	ID=cds-WP_001044509.1;Parent=gene-STY7866_RS00465;Dbxref=Genbank:WP_001044509.1;Name=WP_001044509.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=STY7866_RS00465;product=DNA-binding protein HU-alpha;protein_id=WP_001044509.1;transl_table=11
NZ_CAAR01000014.1	RefSeq	gene	10001	10693	.	+	.	ID=gene-STY7866_RS00470;Name=STY7866_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00470
NZ_CAAR01000014.1	Protein Homology	CDS	10001	10693	.	+	0	ID=cds-WP_001083923.1;Parent=gene-STY7866_RS00470;Dbxref=Genbank:WP_001083923.1;Name=WP_001083923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457903.1;locus_tag=STY7866_RS00470;product=DUF1481 domain-containing protein;protein_id=WP_001083923.1;transl_table=11
##sequence-region NZ_CAAR01000013.1 1 4840
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000013.1	RefSeq	region	1	4840	.	+	.	ID=NZ_CAAR01000013.1:1..4840;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000013.1	RefSeq	gene	29	1351	.	-	.	ID=gene-STY7866_RS00385;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=STY7866_RS00385
NZ_CAAR01000013.1	Protein Homology	CDS	29	1351	.	-	0	ID=cds-WP_000477838.1;Parent=gene-STY7866_RS00385;Dbxref=Genbank:WP_000477838.1;Name=WP_000477838.1;gbkey=CDS;gene=deoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=STY7866_RS00385;product=thymidine phosphorylase;protein_id=WP_000477838.1;transl_table=11
NZ_CAAR01000013.1	RefSeq	gene	1474	2271	.	-	.	ID=gene-STY7866_RS00390;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=STY7866_RS00390
NZ_CAAR01000013.1	Protein Homology	CDS	1474	2271	.	-	0	ID=cds-WP_001127753.1;Parent=gene-STY7866_RS00390;Dbxref=Genbank:WP_001127753.1;Name=WP_001127753.1;gbkey=CDS;gene=deoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458979.1;locus_tag=STY7866_RS00390;product=deoxyribose-phosphate aldolase;protein_id=WP_001127753.1;transl_table=11
NZ_CAAR01000013.1	RefSeq	gene	2513	4063	.	+	.	ID=gene-STY7866_RS00400;Name=STY7866_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00400
NZ_CAAR01000013.1	Protein Homology	CDS	2513	4063	.	+	0	ID=cds-WP_001111683.1;Parent=gene-STY7866_RS00400;Dbxref=Genbank:WP_001111683.1;Name=WP_001111683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458978.1;locus_tag=STY7866_RS00400;product=YjjI family glycine radical enzyme;protein_id=WP_001111683.1;transl_table=11
NZ_CAAR01000013.1	RefSeq	gene	4035	4840	.	+	.	ID=gene-STY7866_RS00405;Name=yjjW;end_range=4840,.;gbkey=Gene;gene=yjjW;gene_biotype=protein_coding;locus_tag=STY7866_RS00405;partial=true
NZ_CAAR01000013.1	Protein Homology	CDS	4035	4840	.	+	0	ID=cds-WP_024151011.1;Parent=gene-STY7866_RS00405;Dbxref=Genbank:WP_024151011.1;Name=WP_024151011.1;end_range=4840,.;gbkey=CDS;gene=yjjW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458977.1;locus_tag=STY7866_RS00405;partial=true;product=YjjW family glycine radical enzyme activase;protein_id=WP_024151011.1;transl_table=11
##sequence-region NZ_CAAR01000012.1 1 12217
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000012.1	RefSeq	region	1	12217	.	+	.	ID=NZ_CAAR01000012.1:1..12217;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000012.1	RefSeq	pseudogene	1	131	.	+	.	ID=gene-STY7866_RS00330;Name=STY7866_RS00330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00330;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000012.1	Protein Homology	CDS	1	131	.	+	2	ID=cds-STY7866_RS00330;Parent=gene-STY7866_RS00330;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454985.1;locus_tag=STY7866_RS00330;partial=true;product=AroM protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000012.1	RefSeq	gene	202	486	.	+	.	ID=gene-STY7866_RS00335;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=STY7866_RS00335
NZ_CAAR01000012.1	Protein Homology	CDS	202	486	.	+	0	ID=cds-WP_000941953.1;Parent=gene-STY7866_RS00335;Dbxref=Genbank:WP_000941953.1;Name=WP_000941953.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454986.1;locus_tag=STY7866_RS00335;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941953.1;transl_table=11
NZ_CAAR01000012.1	RefSeq	gene	524	1435	.	-	.	ID=gene-STY7866_RS00340;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=STY7866_RS00340
NZ_CAAR01000012.1	Protein Homology	CDS	524	1435	.	-	0	ID=cds-WP_000964305.1;Parent=gene-STY7866_RS00340;Dbxref=Genbank:WP_000964305.1;Name=WP_000964305.1;gbkey=CDS;gene=rdgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=STY7866_RS00340;product=recombination-associated protein RdgC;protein_id=WP_000964305.1;transl_table=11
NZ_CAAR01000012.1	RefSeq	gene	1561	2469	.	+	.	ID=gene-STY7866_RS00345;Name=STY7866_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00345
NZ_CAAR01000012.1	Protein Homology	CDS	1561	2469	.	+	0	ID=cds-WP_001219273.1;Parent=gene-STY7866_RS00345;Dbxref=Genbank:WP_001219273.1;Name=WP_001219273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454988.1;locus_tag=STY7866_RS00345;product=fructokinase;protein_id=WP_001219273.1;transl_table=11
NZ_CAAR01000012.1	RefSeq	gene	2489	3661	.	-	.	ID=gene-STY7866_RS00350;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=STY7866_RS00350
NZ_CAAR01000012.1	Protein Homology	CDS	2489	3661	.	-	0	ID=cds-WP_000755616.1;Parent=gene-STY7866_RS00350;Dbxref=Genbank:WP_000755616.1;Name=WP_000755616.1;gbkey=CDS;gene=araJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=STY7866_RS00350;product=MFS transporter AraJ;protein_id=WP_000755616.1;transl_table=11
NZ_CAAR01000012.1	RefSeq	pseudogene	3834	6973	.	-	.	ID=gene-STY7866_RS00355;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=pseudogene;locus_tag=STY7866_RS00355;pseudo=true
NZ_CAAR01000012.1	Protein Homology	CDS	3834	6973	.	-	0	ID=cds-STY7866_RS00355;Parent=gene-STY7866_RS00355;Note=frameshifted;gbkey=CDS;gene=sbcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=STY7866_RS00355;product=exonuclease subunit SbcC;pseudo=true;transl_table=11
NZ_CAAR01000012.1	RefSeq	gene	6970	8172	.	-	.	ID=gene-STY7866_RS00360;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=STY7866_RS00360
NZ_CAAR01000012.1	Protein Homology	CDS	6970	8172	.	-	0	ID=cds-WP_001221246.1;Parent=gene-STY7866_RS00360;Dbxref=Genbank:WP_001221246.1;Name=WP_001221246.1;gbkey=CDS;gene=sbcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454990.1;locus_tag=STY7866_RS00360;product=exonuclease subunit SbcD;protein_id=WP_001221246.1;transl_table=11
NZ_CAAR01000012.1	RefSeq	gene	8387	9076	.	+	.	ID=gene-STY7866_RS00370;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=STY7866_RS00370
NZ_CAAR01000012.1	Protein Homology	CDS	8387	9076	.	+	0	ID=cds-WP_000113921.1;Parent=gene-STY7866_RS00370;Dbxref=Genbank:WP_000113921.1;Name=WP_000113921.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=STY7866_RS00370;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113921.1;transl_table=11
NZ_CAAR01000012.1	RefSeq	gene	9146	10441	.	+	.	ID=gene-STY7866_RS00375;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=STY7866_RS00375
NZ_CAAR01000012.1	Protein Homology	CDS	9146	10441	.	+	0	ID=cds-WP_000893648.1;Parent=gene-STY7866_RS00375;Dbxref=Genbank:WP_000893648.1;Name=WP_000893648.1;gbkey=CDS;gene=phoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454992.1;locus_tag=STY7866_RS00375;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_000893648.1;transl_table=11
NZ_CAAR01000012.1	RefSeq	gene	10850	12169	.	+	.	ID=gene-STY7866_RS00380;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=STY7866_RS00380
NZ_CAAR01000012.1	Protein Homology	CDS	10850	12169	.	+	0	ID=cds-WP_000149625.1;Parent=gene-STY7866_RS00380;Dbxref=Genbank:WP_000149625.1;Name=WP_000149625.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_454993.1;locus_tag=STY7866_RS00380;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149625.1;transl_table=11
##sequence-region NZ_CAAR01000011.1 1 2961
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000011.1	RefSeq	region	1	2961	.	+	.	ID=NZ_CAAR01000011.1:1..2961;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000011.1	RefSeq	gene	1	346	.	+	.	ID=gene-STY7866_RS00300;Name=STY7866_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00300;partial=true;start_range=.,1
NZ_CAAR01000011.1	Protein Homology	CDS	1	346	.	+	1	ID=cds-WP_000607652.1;Parent=gene-STY7866_RS00300;Dbxref=Genbank:WP_000607652.1;Name=WP_000607652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455576.1;locus_tag=STY7866_RS00300;partial=true;product=CoA-binding protein;protein_id=WP_000607652.1;start_range=.,1;transl_table=11
NZ_CAAR01000011.1	RefSeq	gene	391	708	.	-	.	ID=gene-STY7866_RS00305;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=STY7866_RS00305
NZ_CAAR01000011.1	Protein Homology	CDS	391	708	.	-	0	ID=cds-WP_000561983.1;Parent=gene-STY7866_RS00305;Dbxref=Genbank:WP_000561983.1;Name=WP_000561983.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=STY7866_RS00305;product=heat shock protein HspQ;protein_id=WP_000561983.1;transl_table=11
NZ_CAAR01000011.1	RefSeq	gene	766	1977	.	-	.	ID=gene-STY7866_RS00310;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=STY7866_RS00310
NZ_CAAR01000011.1	Protein Homology	CDS	766	1977	.	-	0	ID=cds-WP_000140485.1;Parent=gene-STY7866_RS00310;Dbxref=Genbank:WP_000140485.1;Name=WP_000140485.1;gbkey=CDS;gene=rlmI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455578.1;locus_tag=STY7866_RS00310;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000140485.1;transl_table=11
NZ_CAAR01000011.1	RefSeq	pseudogene	2192	2739	.	+	.	ID=gene-STY7866_RS00320;Name=STY7866_RS00320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00320;pseudo=true
NZ_CAAR01000011.1	Protein Homology	CDS	2192	2739	.	+	0	ID=cds-STY7866_RS00320;Parent=gene-STY7866_RS00320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=STY7866_RS00320;product=YbhB/YbcL family Raf kinase inhibitor-like protein;pseudo=true;transl_table=11
NZ_CAAR01000011.1	RefSeq	pseudogene	2765	2961	.	+	.	ID=gene-STY7866_RS00325;Name=STY7866_RS00325;end_range=2961,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00325;partial=true;pseudo=true
NZ_CAAR01000011.1	Protein Homology	CDS	2765	2961	.	+	0	ID=cds-STY7866_RS00325;Parent=gene-STY7866_RS00325;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2961,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=STY7866_RS00325;partial=true;product=AraC family transcriptional regulator;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000010.1 1 1811
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000010.1	RefSeq	region	1	1811	.	+	.	ID=NZ_CAAR01000010.1:1..1811;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000010.1	RefSeq	pseudogene	43	1811	.	-	.	ID=gene-STY7866_RS00295;Name=STY7866_RS00295;end_range=1811,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00295;partial=true;pseudo=true
NZ_CAAR01000010.1	Protein Homology	CDS	43	1811	.	-	1	ID=cds-STY7866_RS00295;Parent=gene-STY7866_RS00295;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=1811,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_456817.1;locus_tag=STY7866_RS00295;partial=true;product=DNA gyrase subunit A;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000009.1 1 6396
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000009.1	RefSeq	region	1	6396	.	+	.	ID=NZ_CAAR01000009.1:1..6396;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000009.1	RefSeq	gene	40	834	.	-	.	ID=gene-STY7866_RS00260;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=STY7866_RS00260
NZ_CAAR01000009.1	Protein Homology	CDS	40	834	.	-	0	ID=cds-WP_000816222.1;Parent=gene-STY7866_RS00260;Dbxref=Genbank:WP_000816222.1;Name=WP_000816222.1;gbkey=CDS;gene=thyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=STY7866_RS00260;product=thymidylate synthase;protein_id=WP_000816222.1;transl_table=11
NZ_CAAR01000009.1	RefSeq	gene	841	1716	.	-	.	ID=gene-STY7866_RS00265;Name=STY7866_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00265
NZ_CAAR01000009.1	Protein Homology	CDS	841	1716	.	-	0	ID=cds-WP_000204645.1;Parent=gene-STY7866_RS00265;Dbxref=Genbank:WP_000204645.1;Name=WP_000204645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457396.1;locus_tag=STY7866_RS00265;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204645.1;transl_table=11
NZ_CAAR01000009.1	RefSeq	gene	1929	4175	.	-	.	ID=gene-STY7866_RS00270;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=STY7866_RS00270
NZ_CAAR01000009.1	Protein Homology	CDS	1929	4175	.	-	0	ID=cds-WP_000957883.1;Parent=gene-STY7866_RS00270;Dbxref=Genbank:WP_000957883.1;Name=WP_000957883.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457397.1;locus_tag=STY7866_RS00270;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957883.1;transl_table=11
NZ_CAAR01000009.1	RefSeq	gene	4188	4718	.	-	.	ID=gene-STY7866_RS00275;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=STY7866_RS00275
NZ_CAAR01000009.1	Protein Homology	CDS	4188	4718	.	-	0	ID=cds-WP_000564481.1;Parent=gene-STY7866_RS00275;Dbxref=Genbank:WP_000564481.1;Name=WP_000564481.1;gbkey=CDS;gene=rppH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017803569.1;locus_tag=STY7866_RS00275;product=RNA pyrophosphohydrolase;protein_id=WP_000564481.1;transl_table=11
NZ_CAAR01000009.1	RefSeq	pseudogene	5402	6098	.	+	.	ID=gene-STY7866_RS00285;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=pseudogene;locus_tag=STY7866_RS00285;pseudo=true
NZ_CAAR01000009.1	Protein Homology	CDS	5402	6098	.	+	0	ID=cds-STY7866_RS00285;Parent=gene-STY7866_RS00285;Note=frameshifted;gbkey=CDS;gene=mutH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457399.1;locus_tag=STY7866_RS00285;product=DNA mismatch repair endonuclease MutH;pseudo=true;transl_table=11
NZ_CAAR01000009.1	RefSeq	pseudogene	6280	6396	.	+	.	ID=gene-STY7866_RS26700;Name=STY7866_RS26700;end_range=6396,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26700;partial=true;pseudo=true
NZ_CAAR01000009.1	Protein Homology	CDS	6280	6396	.	+	0	ID=cds-STY7866_RS26700;Parent=gene-STY7866_RS26700;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=6396,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311716.1;locus_tag=STY7866_RS26700;partial=true;product=TerC family protein;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000008.1 1 610
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000008.1	RefSeq	region	1	610	.	+	.	ID=NZ_CAAR01000008.1:1..610;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000008.1	RefSeq	pseudogene	1	567	.	+	.	ID=gene-STY7866_RS00255;Name=STY7866_RS00255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00255;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000008.1	Protein Homology	CDS	1	567	.	+	0	ID=cds-STY7866_RS00255;Parent=gene-STY7866_RS00255;Note=Converts isocitrate to alpha ketoglutarate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=STY7866_RS00255;partial=true;product=NADP-dependent isocitrate dehydrogenase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_CAAR01000007.1 1 7466
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000007.1	RefSeq	region	1	7466	.	+	.	ID=NZ_CAAR01000007.1:1..7466;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000007.1	RefSeq	pseudogene	39	2317	.	-	.	ID=gene-STY7866_RS00225;Name=STY7866_RS00225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00225;pseudo=true
NZ_CAAR01000007.1	Protein Homology	CDS	39	2317	.	-	0	ID=cds-STY7866_RS00225;Parent=gene-STY7866_RS00225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457006.1;locus_tag=STY7866_RS00225;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;pseudo=true;transl_table=11
NZ_CAAR01000007.1	RefSeq	gene	2589	3539	.	+	.	ID=gene-STY7866_RS00230;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=STY7866_RS00230
NZ_CAAR01000007.1	Protein Homology	CDS	2589	3539	.	+	0	ID=cds-WP_001072436.1;Parent=gene-STY7866_RS00230;Dbxref=Genbank:WP_001072436.1;Name=WP_001072436.1;gbkey=CDS;gene=tal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457007.1;locus_tag=STY7866_RS00230;product=transaldolase;protein_id=WP_001072436.1;transl_table=11
NZ_CAAR01000007.1	RefSeq	gene	3559	5559	.	+	.	ID=gene-STY7866_RS00235;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=STY7866_RS00235
NZ_CAAR01000007.1	Protein Homology	CDS	3559	5559	.	+	0	ID=cds-WP_000087345.1;Parent=gene-STY7866_RS00235;Dbxref=Genbank:WP_000087345.1;Name=WP_000087345.1;gbkey=CDS;gene=tkt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457008.1;locus_tag=STY7866_RS00235;product=transketolase;protein_id=WP_000087345.1;transl_table=11
NZ_CAAR01000007.1	RefSeq	gene	5622	5852	.	-	.	ID=gene-STY7866_RS00240;Name=STY7866_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00240
NZ_CAAR01000007.1	Protein Homology	CDS	5622	5852	.	-	0	ID=cds-WP_000700635.1;Parent=gene-STY7866_RS00240;Dbxref=Genbank:WP_000700635.1;Name=WP_000700635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=STY7866_RS00240;product=hypothetical protein;protein_id=WP_000700635.1;transl_table=11
NZ_CAAR01000007.1	RefSeq	gene	5980	7023	.	-	.	ID=gene-STY7866_RS00245;Name=STY7866_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00245
NZ_CAAR01000007.1	Protein Homology	CDS	5980	7023	.	-	0	ID=cds-WP_001270681.1;Parent=gene-STY7866_RS00245;Dbxref=Genbank:WP_001270681.1;Name=WP_001270681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457010.1;locus_tag=STY7866_RS00245;product=DUF1176 domain-containing protein;protein_id=WP_001270681.1;transl_table=11
NZ_CAAR01000007.1	RefSeq	pseudogene	7148	7466	.	-	.	ID=gene-STY7866_RS00250;Name=STY7866_RS00250;end_range=7466,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00250;partial=true;pseudo=true
NZ_CAAR01000007.1	Protein Homology	CDS	7148	7466	.	-	1	ID=cds-STY7866_RS00250;Parent=gene-STY7866_RS00250;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7466,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457011.1;locus_tag=STY7866_RS00250;partial=true;product=GDP-mannose pyrophosphatase NudK;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000006.1 1 2456
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000006.1	RefSeq	region	1	2456	.	+	.	ID=NZ_CAAR01000006.1:1..2456;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000006.1	RefSeq	gene	42	2033	.	-	.	ID=gene-STY7866_RS00215;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=STY7866_RS00215
NZ_CAAR01000006.1	Protein Homology	CDS	42	2033	.	-	0	ID=cds-WP_000098658.1;Parent=gene-STY7866_RS00215;Dbxref=Genbank:WP_000098658.1;Name=WP_000098658.1;gbkey=CDS;gene=tkt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457476.1;locus_tag=STY7866_RS00215;product=transketolase;protein_id=WP_000098658.1;transl_table=11
NZ_CAAR01000006.1	RefSeq	pseudogene	2309	2456	.	+	.	ID=gene-STY7866_RS00220;Name=STY7866_RS00220;end_range=2456,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00220;partial=true;pseudo=true
NZ_CAAR01000006.1	Protein Homology	CDS	2309	2456	.	+	0	ID=cds-STY7866_RS00220;Parent=gene-STY7866_RS00220;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2456,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457477.1;locus_tag=STY7866_RS00220;partial=true;product=metalloprotease;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000005.1 1 4406
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000005.1	RefSeq	region	1	4406	.	+	.	ID=NZ_CAAR01000005.1:1..4406;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000005.1	RefSeq	gene	369	704	.	+	.	ID=gene-STY7866_RS00180;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=STY7866_RS00180
NZ_CAAR01000005.1	Protein Homology	CDS	369	704	.	+	0	ID=cds-WP_001031445.1;Parent=gene-STY7866_RS00180;Dbxref=Genbank:WP_001031445.1;Name=WP_001031445.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=STY7866_RS00180;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001031445.1;transl_table=11
NZ_CAAR01000005.1	RefSeq	gene	717	1196	.	+	.	ID=gene-STY7866_RS00185;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=STY7866_RS00185
NZ_CAAR01000005.1	Protein Homology	CDS	717	1196	.	+	0	ID=cds-WP_000820751.1;Parent=gene-STY7866_RS00185;Dbxref=Genbank:WP_000820751.1;Name=WP_000820751.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457003.1;locus_tag=STY7866_RS00185;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820751.1;transl_table=11
NZ_CAAR01000005.1	RefSeq	gene	1174	1863	.	+	.	ID=gene-STY7866_RS00190;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=STY7866_RS00190
NZ_CAAR01000005.1	Protein Homology	CDS	1174	1863	.	+	0	ID=cds-WP_000733871.1;Parent=gene-STY7866_RS00190;Dbxref=Genbank:WP_000733871.1;Name=WP_000733871.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457002.1;locus_tag=STY7866_RS00190;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733871.1;transl_table=11
NZ_CAAR01000005.1	RefSeq	gene	1860	2657	.	+	.	ID=gene-STY7866_RS00195;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=STY7866_RS00195
NZ_CAAR01000005.1	Protein Homology	CDS	1860	2657	.	+	0	ID=cds-WP_000997668.1;Parent=gene-STY7866_RS00195;Dbxref=Genbank:WP_000997668.1;Name=WP_000997668.1;gbkey=CDS;gene=eutT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457001.1;locus_tag=STY7866_RS00195;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000997668.1;transl_table=11
NZ_CAAR01000005.1	RefSeq	gene	2654	3670	.	+	.	ID=gene-STY7866_RS00200;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=STY7866_RS00200
NZ_CAAR01000005.1	Protein Homology	CDS	2654	3670	.	+	0	ID=cds-WP_000582913.1;Parent=gene-STY7866_RS00200;Dbxref=Genbank:WP_000582913.1;Name=WP_000582913.1;gbkey=CDS;gene=pta;inference=COORDINATES: similar to AA sequence:RefSeq:NP_457000.1;locus_tag=STY7866_RS00200;product=phosphate acetyltransferase;protein_id=WP_000582913.1;transl_table=11
NZ_CAAR01000005.1	RefSeq	pseudogene	3711	3986	.	+	.	ID=gene-STY7866_RS00205;Name=eutM;end_range=3986,.;gbkey=Gene;gene=eutM;gene_biotype=pseudogene;locus_tag=STY7866_RS00205;partial=true;pseudo=true
NZ_CAAR01000005.1	Protein Homology	CDS	3711	3986	.	+	0	ID=cds-STY7866_RS00205;Parent=gene-STY7866_RS00205;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3986,.;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=STY7866_RS00205;partial=true;product=ethanolamine utilization microcompartment protein EutM;pseudo=true;transl_table=11
NZ_CAAR01000005.1	RefSeq	gene	4101	4400	.	+	.	ID=gene-STY7866_RS00210;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=STY7866_RS00210
NZ_CAAR01000005.1	Protein Homology	CDS	4101	4400	.	+	0	ID=cds-WP_000387009.1;Parent=gene-STY7866_RS00210;Dbxref=Genbank:WP_000387009.1;Name=WP_000387009.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461399.3;locus_tag=STY7866_RS00210;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_000387009.1;transl_table=11
##sequence-region NZ_CAAR01000004.1 1 10270
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000004.1	RefSeq	region	1	10270	.	+	.	ID=NZ_CAAR01000004.1:1..10270;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000004.1	RefSeq	gene	1	899	.	-	.	ID=gene-STY7866_RS00125;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=STY7866_RS00125;partial=true;start_range=.,1
NZ_CAAR01000004.1	Protein Homology	CDS	1	899	.	-	0	ID=cds-WP_001115204.1;Parent=gene-STY7866_RS00125;Dbxref=Genbank:WP_001115204.1;Name=WP_001115204.1;gbkey=CDS;gene=hutU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455332.1;locus_tag=STY7866_RS00125;partial=true;product=urocanate hydratase;protein_id=WP_001115204.1;start_range=.,1;transl_table=11
NZ_CAAR01000004.1	RefSeq	gene	1095	1820	.	-	.	ID=gene-STY7866_RS00130;Name=STY7866_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00130
NZ_CAAR01000004.1	Protein Homology	CDS	1095	1820	.	-	0	ID=cds-WP_000287410.1;Parent=gene-STY7866_RS00130;Dbxref=Genbank:WP_000287410.1;Name=WP_000287410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455331.1;locus_tag=STY7866_RS00130;product=histidine utilization repressor;protein_id=WP_000287410.1;transl_table=11
NZ_CAAR01000004.1	RefSeq	gene	1865	2806	.	-	.	ID=gene-STY7866_RS00135;Name=STY7866_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00135
NZ_CAAR01000004.1	Protein Homology	CDS	1865	2806	.	-	0	ID=cds-WP_000195673.1;Parent=gene-STY7866_RS00135;Dbxref=Genbank:WP_000195673.1;Name=WP_000195673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455330.1;locus_tag=STY7866_RS00135;product=formimidoylglutamase;protein_id=WP_000195673.1;transl_table=11
NZ_CAAR01000004.1	RefSeq	pseudogene	2803	4027	.	-	.	ID=gene-STY7866_RS00140;Name=STY7866_RS00140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00140;pseudo=true
NZ_CAAR01000004.1	Protein Homology	CDS	2803	4027	.	-	0	ID=cds-STY7866_RS00140;Parent=gene-STY7866_RS00140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455329.1;locus_tag=STY7866_RS00140;product=imidazolonepropionase;pseudo=true;transl_table=11
NZ_CAAR01000004.1	RefSeq	gene	4265	5548	.	+	.	ID=gene-STY7866_RS00145;Name=STY7866_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00145
NZ_CAAR01000004.1	Protein Homology	CDS	4265	5548	.	+	0	ID=cds-WP_001094768.1;Parent=gene-STY7866_RS00145;Dbxref=Genbank:WP_001094768.1;Name=WP_001094768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455328.1;locus_tag=STY7866_RS00145;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001094768.1;transl_table=11
NZ_CAAR01000004.1	RefSeq	gene	5692	6687	.	-	.	ID=gene-STY7866_RS00150;Name=STY7866_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00150
NZ_CAAR01000004.1	Protein Homology	CDS	5692	6687	.	-	0	ID=cds-WP_000815468.1;Parent=gene-STY7866_RS00150;Dbxref=Genbank:WP_000815468.1;Name=WP_000815468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=STY7866_RS00150;product=6-phosphogluconolactonase;protein_id=WP_000815468.1;transl_table=11
NZ_CAAR01000004.1	RefSeq	gene	6851	7669	.	+	.	ID=gene-STY7866_RS00155;Name=STY7866_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00155
NZ_CAAR01000004.1	Protein Homology	CDS	6851	7669	.	+	0	ID=cds-WP_010989132.1;Parent=gene-STY7866_RS00155;Dbxref=Genbank:WP_010989132.1;Name=WP_010989132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455326.1;locus_tag=STY7866_RS00155;product=pyridoxal phosphatase;protein_id=WP_010989132.1;transl_table=11
NZ_CAAR01000004.1	RefSeq	gene	7670	8728	.	-	.	ID=gene-STY7866_RS00160;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=STY7866_RS00160
NZ_CAAR01000004.1	Protein Homology	CDS	7670	8728	.	-	0	ID=cds-WP_000891721.1;Parent=gene-STY7866_RS00160;Dbxref=Genbank:WP_000891721.1;Name=WP_000891721.1;gbkey=CDS;gene=modC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455325.1;locus_tag=STY7866_RS00160;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891721.1;transl_table=11
NZ_CAAR01000004.1	RefSeq	pseudogene	8731	9421	.	-	.	ID=gene-STY7866_RS00165;Name=modB;gbkey=Gene;gene=modB;gene_biotype=pseudogene;locus_tag=STY7866_RS00165;pseudo=true
NZ_CAAR01000004.1	Protein Homology	CDS	8731	9421	.	-	0	ID=cds-STY7866_RS00165;Parent=gene-STY7866_RS00165;Note=frameshifted;gbkey=CDS;gene=modB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455324.1;locus_tag=STY7866_RS00165;product=molybdate ABC transporter permease subunit;pseudo=true;transl_table=11
NZ_CAAR01000004.1	RefSeq	gene	9421	10194	.	-	.	ID=gene-STY7866_RS00170;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=STY7866_RS00170
NZ_CAAR01000004.1	Protein Homology	CDS	9421	10194	.	-	0	ID=cds-WP_000951413.1;Parent=gene-STY7866_RS00170;Dbxref=Genbank:WP_000951413.1;Name=WP_000951413.1;gbkey=CDS;gene=modA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_455323.1;locus_tag=STY7866_RS00170;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000951413.1;transl_table=11
##sequence-region NZ_CAAR01000003.1 1 4069
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000003.1	RefSeq	region	1	4069	.	+	.	ID=NZ_CAAR01000003.1:1..4069;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000003.1	RefSeq	pseudogene	1	88	.	-	.	ID=gene-STY7866_RS00100;Name=STY7866_RS00100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00100;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000003.1	Protein Homology	CDS	1	88	.	-	0	ID=cds-STY7866_RS00100;Parent=gene-STY7866_RS00100;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001545696.1;locus_tag=STY7866_RS00100;partial=true;product=invasin;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000003.1	RefSeq	gene	162	758	.	-	.	ID=gene-STY7866_RS00105;Name=STY7866_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00105
NZ_CAAR01000003.1	Protein Homology	CDS	162	758	.	-	0	ID=cds-WP_050193559.1;Parent=gene-STY7866_RS00105;Dbxref=Genbank:WP_050193559.1;Name=WP_050193559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537091.1;locus_tag=STY7866_RS00105;product=hypothetical protein;protein_id=WP_050193559.1;transl_table=11
NZ_CAAR01000003.1	RefSeq	gene	755	1006	.	-	.	ID=gene-STY7866_RS26695;Name=STY7866_RS26695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26695
NZ_CAAR01000003.1	GeneMarkS-2+	CDS	755	1006	.	-	0	ID=cds-WP_151259994.1;Parent=gene-STY7866_RS26695;Dbxref=Genbank:WP_151259994.1;Name=WP_151259994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=STY7866_RS26695;product=hypothetical protein;protein_id=WP_151259994.1;transl_table=11
NZ_CAAR01000003.1	RefSeq	gene	1303	2160	.	+	.	ID=gene-STY7866_RS00110;Name=STY7866_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00110
NZ_CAAR01000003.1	Protein Homology	CDS	1303	2160	.	+	0	ID=cds-WP_001768272.1;Parent=gene-STY7866_RS00110;Dbxref=Genbank:WP_001768272.1;Name=WP_001768272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=STY7866_RS00110;product=helix-turn-helix domain-containing protein;protein_id=WP_001768272.1;transl_table=11
NZ_CAAR01000003.1	RefSeq	gene	2551	3660	.	+	.	ID=gene-STY7866_RS00115;Name=STY7866_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00115
NZ_CAAR01000003.1	Protein Homology	CDS	2551	3660	.	+	0	ID=cds-WP_001803345.1;Parent=gene-STY7866_RS00115;Dbxref=Genbank:WP_001803345.1;Name=WP_001803345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=STY7866_RS00115;product=hypothetical protein;protein_id=WP_001803345.1;transl_table=11
NZ_CAAR01000003.1	RefSeq	gene	3874	4068	.	-	.	ID=gene-STY7866_RS00120;Name=STY7866_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00120
NZ_CAAR01000003.1	Protein Homology	CDS	3874	4068	.	-	0	ID=cds-WP_001763787.1;Parent=gene-STY7866_RS00120;Dbxref=Genbank:WP_001763787.1;Name=WP_001763787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004861607.1;locus_tag=STY7866_RS00120;product=YgdI/YgdR family lipoprotein;protein_id=WP_001763787.1;transl_table=11
##sequence-region NZ_CAAR01000002.1 1 7758
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000002.1	RefSeq	region	1	7758	.	+	.	ID=NZ_CAAR01000002.1:1..7758;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000002.1	RefSeq	pseudogene	1	831	.	+	.	ID=gene-STY7866_RS00080;Name=STY7866_RS00080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00080;partial=true;pseudo=true;start_range=.,1
NZ_CAAR01000002.1	Protein Homology	CDS	1	831	.	+	0	ID=cds-STY7866_RS00080;Parent=gene-STY7866_RS00080;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458301.1;locus_tag=STY7866_RS00080;partial=true;product=PilZ domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_CAAR01000002.1	RefSeq	gene	842	3142	.	+	.	ID=gene-STY7866_RS00085;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=STY7866_RS00085
NZ_CAAR01000002.1	Protein Homology	CDS	842	3142	.	+	0	ID=cds-WP_000823808.1;Parent=gene-STY7866_RS00085;Dbxref=Genbank:WP_000823808.1;Name=WP_000823808.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458302.1;locus_tag=STY7866_RS00085;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_000823808.1;transl_table=11
NZ_CAAR01000002.1	RefSeq	gene	3146	4255	.	+	.	ID=gene-STY7866_RS00090;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=STY7866_RS00090
NZ_CAAR01000002.1	Protein Homology	CDS	3146	4255	.	+	0	ID=cds-WP_000988804.1;Parent=gene-STY7866_RS00090;Dbxref=Genbank:WP_000988804.1;Name=WP_000988804.1;gbkey=CDS;gene=bcsZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458303.1;locus_tag=STY7866_RS00090;product=cellulase;protein_id=WP_000988804.1;transl_table=11
NZ_CAAR01000002.1	RefSeq	pseudogene	4237	7758	.	+	.	ID=gene-STY7866_RS00095;Name=bcsC;end_range=7758,.;gbkey=Gene;gene=bcsC;gene_biotype=pseudogene;locus_tag=STY7866_RS00095;partial=true;pseudo=true
NZ_CAAR01000002.1	Protein Homology	CDS	4237	7758	.	+	0	ID=cds-STY7866_RS00095;Parent=gene-STY7866_RS00095;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;end_range=7758,.;gbkey=CDS;gene=bcsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=STY7866_RS00095;partial=true;product=cellulose biosynthesis protein BcsC;pseudo=true;transl_table=11
##sequence-region NZ_CAAR01000001.1 1 12553
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=497976
NZ_CAAR01000001.1	RefSeq	region	1	12553	.	+	.	ID=NZ_CAAR01000001.1:1..12553;Dbxref=taxon:497976;country=Morocco;gbkey=Src;genome=genomic;mol_type=genomic DNA;note=part of Typhi resequencing project.;serovar=Typhi;strain=E00-7866;sub-species=enterica
NZ_CAAR01000001.1	RefSeq	gene	1	1531	.	+	.	ID=gene-STY7866_RS00005;Name=STY7866_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00005;partial=true;start_range=.,1
NZ_CAAR01000001.1	Protein Homology	CDS	1	1531	.	+	1	ID=cds-WP_000618449.1;Parent=gene-STY7866_RS00005;Dbxref=Genbank:WP_000618449.1;Name=WP_000618449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015606341.1;locus_tag=STY7866_RS00005;partial=true;product=DNA-binding domain-containing protein;protein_id=WP_000618449.1;start_range=.,1;transl_table=11
NZ_CAAR01000001.1	RefSeq	gene	1695	2708	.	+	.	ID=gene-STY7866_RS00010;Name=STY7866_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00010
NZ_CAAR01000001.1	Protein Homology	CDS	1695	2708	.	+	0	ID=cds-WP_000449622.1;Parent=gene-STY7866_RS00010;Dbxref=Genbank:WP_000449622.1;Name=WP_000449622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458745.1;locus_tag=STY7866_RS00010;product=site-specific integrase;protein_id=WP_000449622.1;transl_table=11
NZ_CAAR01000001.1	RefSeq	gene	3136	3429	.	+	.	ID=gene-STY7866_RS00015;Name=STY7866_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00015
NZ_CAAR01000001.1	Protein Homology	CDS	3136	3429	.	+	0	ID=cds-WP_001143724.1;Parent=gene-STY7866_RS00015;Dbxref=Genbank:WP_001143724.1;Name=WP_001143724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458746.1;locus_tag=STY7866_RS00015;product=DUF1778 domain-containing protein;protein_id=WP_001143724.1;transl_table=11
NZ_CAAR01000001.1	RefSeq	gene	3426	3914	.	+	.	ID=gene-STY7866_RS00020;Name=STY7866_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00020
NZ_CAAR01000001.1	Protein Homology	CDS	3426	3914	.	+	0	ID=cds-WP_000622308.1;Parent=gene-STY7866_RS00020;Dbxref=Genbank:WP_000622308.1;Name=WP_000622308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458747.1;locus_tag=STY7866_RS00020;product=GNAT family N-acetyltransferase;protein_id=WP_000622308.1;transl_table=11
NZ_CAAR01000001.1	RefSeq	pseudogene	4094	4548	.	-	.	ID=gene-STY7866_RS00025;Name=STY7866_RS00025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00025;pseudo=true
NZ_CAAR01000001.1	Protein Homology	CDS	4094	4548	.	-	0	ID=cds-STY7866_RS00025;Parent=gene-STY7866_RS00025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000434168.1;locus_tag=STY7866_RS00025;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000001.1	RefSeq	gene	4630	4893	.	-	.	ID=gene-STY7866_RS26685;Name=STY7866_RS26685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS26685
NZ_CAAR01000001.1	Protein Homology	CDS	4630	4893	.	-	0	ID=cds-WP_000905294.1;Parent=gene-STY7866_RS26685;Dbxref=Genbank:WP_000905294.1;Name=WP_000905294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000905294.1;locus_tag=STY7866_RS26685;product=hypothetical protein;protein_id=WP_000905294.1;transl_table=11
NZ_CAAR01000001.1	RefSeq	gene	5185	7470	.	-	.	ID=gene-STY7866_RS00030;Name=STY7866_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00030
NZ_CAAR01000001.1	Protein Homology	CDS	5185	7470	.	-	0	ID=cds-WP_010989300.1;Parent=gene-STY7866_RS00030;Dbxref=Genbank:WP_010989300.1;Name=WP_010989300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989300.1;locus_tag=STY7866_RS00030;product=hypothetical protein;protein_id=WP_010989300.1;transl_table=11
NZ_CAAR01000001.1	RefSeq	pseudogene	7551	9223	.	-	.	ID=gene-STY7866_RS00035;Name=STY7866_RS00035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00035;pseudo=true
NZ_CAAR01000001.1	Protein Homology	CDS	7551	9223	.	-	0	ID=cds-STY7866_RS00035;Parent=gene-STY7866_RS00035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989301.1;locus_tag=STY7866_RS00035;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000001.1	RefSeq	gene	9770	10231	.	+	.	ID=gene-STY7866_RS00040;Name=STY7866_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00040
NZ_CAAR01000001.1	Protein Homology	CDS	9770	10231	.	+	0	ID=cds-WP_000246267.1;Parent=gene-STY7866_RS00040;Dbxref=Genbank:WP_000246267.1;Name=WP_000246267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458751.1;locus_tag=STY7866_RS00040;product=hypothetical protein;protein_id=WP_000246267.1;transl_table=11
NZ_CAAR01000001.1	RefSeq	gene	10228	10449	.	+	.	ID=gene-STY7866_RS00045;Name=STY7866_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00045
NZ_CAAR01000001.1	Protein Homology	CDS	10228	10449	.	+	0	ID=cds-WP_000193665.1;Parent=gene-STY7866_RS00045;Dbxref=Genbank:WP_000193665.1;Name=WP_000193665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458752.1;locus_tag=STY7866_RS00045;product=transcriptional regulator;protein_id=WP_000193665.1;transl_table=11
NZ_CAAR01000001.1	RefSeq	pseudogene	10681	10893	.	+	.	ID=gene-STY7866_RS26690;Name=STY7866_RS26690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS26690;pseudo=true
NZ_CAAR01000001.1	Protein Homology	CDS	10681	10893	.	+	0	ID=cds-STY7866_RS26690;Parent=gene-STY7866_RS26690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664369.1;locus_tag=STY7866_RS26690;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CAAR01000001.1	RefSeq	gene	11306	12088	.	+	.	ID=gene-STY7866_RS00060;Name=STY7866_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=STY7866_RS00060
NZ_CAAR01000001.1	Protein Homology	CDS	11306	12088	.	+	0	ID=cds-WP_000511749.1;Parent=gene-STY7866_RS00060;Dbxref=Genbank:WP_000511749.1;Name=WP_000511749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_458755.1;locus_tag=STY7866_RS00060;product=DNA-binding protein;protein_id=WP_000511749.1;transl_table=11
NZ_CAAR01000001.1	RefSeq	pseudogene	12113	12326	.	-	.	ID=gene-STY7866_RS00065;Name=STY7866_RS00065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=STY7866_RS00065;pseudo=true
NZ_CAAR01000001.1	Protein Homology	CDS	12113	12326	.	-	0	ID=cds-STY7866_RS00065;Parent=gene-STY7866_RS00065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989303.1;locus_tag=STY7866_RS00065;product=hypothetical protein;pseudo=true;transl_table=11
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