##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM60121v1 #!genome-build-accession NCBI_Assembly:GCF_000601215.1 #!annotation-date 02/22/2020 09:52:09 #!annotation-source NCBI RefSeq ##sequence-region NZ_JHDJ01000001.1 1 5088 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000001.1 RefSeq region 1 5088 . + . ID=NZ_JHDJ01000001.1:1..5088;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000001.1 RefSeq gene 1 238 . + . ID=gene-AD08_RS24345;Name=AD08_RS24345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24345;old_locus_tag=AD08_4842;partial=true;start_range=.,1 NZ_JHDJ01000001.1 Protein Homology CDS 1 238 . + 1 ID=cds-WP_024169274.1;Parent=gene-AD08_RS24345;Dbxref=Genbank:WP_024169274.1;Name=WP_024169274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS24345;partial=true;product=transposase;protein_id=WP_024169274.1;start_range=.,1;transl_table=11 NZ_JHDJ01000001.1 RefSeq gene 545 1240 . - . ID=gene-AD08_RS24340;Name=AD08_RS24340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24340;old_locus_tag=AD08_4843 NZ_JHDJ01000001.1 Protein Homology CDS 545 1240 . - 0 ID=cds-WP_032217518.1;Parent=gene-AD08_RS24340;Dbxref=Genbank:WP_032217518.1;Name=WP_032217518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694192.1;locus_tag=AD08_RS24340;product=replication initiation protein;protein_id=WP_032217518.1;transl_table=11 NZ_JHDJ01000001.1 RefSeq pseudogene 2024 2176 . + . ID=gene-AD08_RS27545;Name=AD08_RS27545;end_range=2176,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS27545;partial=true;pseudo=true;start_range=.,2024 NZ_JHDJ01000001.1 Protein Homology CDS 2024 2176 . + 0 ID=cds-AD08_RS27545;Parent=gene-AD08_RS27545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2176,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343765.1;locus_tag=AD08_RS27545;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,2024;transl_table=11 NZ_JHDJ01000001.1 RefSeq pseudogene 2321 2838 . + . ID=gene-AD08_RS27550;Name=AD08_RS27550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS27550;old_locus_tag=AD08_4845;pseudo=true NZ_JHDJ01000001.1 Protein Homology CDS 2321 2838 . + 0 ID=cds-AD08_RS27550;Parent=gene-AD08_RS27550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000442229.1;locus_tag=AD08_RS27550;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_JHDJ01000001.1 RefSeq pseudogene 2911 3138 . + . ID=gene-AD08_RS0124360;Name=AD08_RS0124360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0124360;partial=true;pseudo=true;start_range=.,2911 NZ_JHDJ01000001.1 Protein Homology CDS 2911 3138 . + 0 ID=cds-AD08_RS0124360;Parent=gene-AD08_RS0124360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=AD08_RS0124360;partial=true;product=transposase;pseudo=true;start_range=.,2911;transl_table=11 NZ_JHDJ01000001.1 RefSeq gene 3933 4367 . + . ID=gene-AD08_RS24335;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=AD08_RS24335;old_locus_tag=AD08_4847 NZ_JHDJ01000001.1 Protein Homology CDS 3933 4367 . + 0 ID=cds-WP_001575710.1;Parent=gene-AD08_RS24335;Dbxref=Genbank:WP_001575710.1;Name=WP_001575710.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1;locus_tag=AD08_RS24335;product=conjugation system SOS inhibitor PsiB;protein_id=WP_001575710.1;transl_table=11 NZ_JHDJ01000001.1 RefSeq pseudogene 4466 4646 . - . ID=gene-AD08_RS27555;Name=AD08_RS27555;end_range=4646,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS27555;partial=true;pseudo=true NZ_JHDJ01000001.1 Protein Homology CDS 4466 4646 . - 0 ID=cds-AD08_RS27555;Parent=gene-AD08_RS27555;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4646,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=AD08_RS27555;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_JHDJ01000001.1 RefSeq pseudogene 4826 4888 . + . ID=gene-AD08_RS31465;Name=AD08_RS31465;end_range=4888,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31465;partial=true;pseudo=true NZ_JHDJ01000001.1 Protein Homology CDS 4826 4888 . + 0 ID=cds-AD08_RS31465;Parent=gene-AD08_RS31465;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4888,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AD08_RS31465;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000002.1 1 1644 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000002.1 RefSeq region 1 1644 . + . ID=NZ_JHDJ01000002.1:1..1644;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000002.1 RefSeq pseudogene 1 139 . + . ID=gene-AD08_RS27285;Name=AD08_RS27285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS27285;old_locus_tag=AD08_4848;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000002.1 Protein Homology CDS 1 139 . + 1 ID=cds-AD08_RS27285;Parent=gene-AD08_RS27285;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309762.1;locus_tag=AD08_RS27285;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000002.1 RefSeq gene 189 1031 . + . ID=gene-AD08_RS24330;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AD08_RS24330;old_locus_tag=AD08_4849 NZ_JHDJ01000002.1 Protein Homology CDS 189 1031 . + 0 ID=cds-WP_000555857.1;Parent=gene-AD08_RS24330;Dbxref=Genbank:WP_000555857.1;Name=WP_000555857.1;gbkey=CDS;gene=purU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784958.1;locus_tag=AD08_RS24330;product=formyltetrahydrofolate deformylase;protein_id=WP_000555857.1;transl_table=11 NZ_JHDJ01000002.1 RefSeq gene 1191 1275 . + . ID=gene-AD08_RS24325;Name=AD08_RS24325;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS24325;old_locus_tag=AD08_4850 NZ_JHDJ01000002.1 tRNAscan-SE tRNA 1191 1275 . + . ID=rna-AD08_RS24325;Parent=gene-AD08_RS24325;anticodon=(pos:1225..1227);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS24325;product=tRNA-Tyr NZ_JHDJ01000002.1 tRNAscan-SE exon 1191 1275 . + . ID=exon-AD08_RS24325-1;Parent=rna-AD08_RS24325;anticodon=(pos:1225..1227);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS24325;product=tRNA-Tyr NZ_JHDJ01000002.1 RefSeq gene 1322 1453 . + . ID=gene-AD08_RS27295;Name=AD08_RS27295;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD08_RS27295 NZ_JHDJ01000002.1 cmsearch ncRNA 1322 1453 . + . ID=rna-AD08_RS27295;Parent=gene-AD08_RS27295;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27295;product=RtT sRNA NZ_JHDJ01000002.1 cmsearch exon 1322 1453 . + . ID=exon-AD08_RS27295-1;Parent=rna-AD08_RS27295;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27295;product=RtT sRNA ##sequence-region NZ_JHDJ01000003.1 1 839 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000003.1 RefSeq region 1 839 . + . ID=NZ_JHDJ01000003.1:1..839;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000003.1 RefSeq gene 1 218 . + . ID=gene-AD08_RS24320;Name=AD08_RS24320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24320;old_locus_tag=AD08_4851;partial=true;start_range=.,1 NZ_JHDJ01000003.1 Protein Homology CDS 1 218 . + 2 ID=cds-WP_032217521.1;Parent=gene-AD08_RS24320;Dbxref=Genbank:WP_032217521.1;Name=WP_032217521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS24320;partial=true;product=transposase;protein_id=WP_032217521.1;start_range=.,1;transl_table=11 NZ_JHDJ01000003.1 RefSeq pseudogene 261 839 . + . ID=gene-AD08_RS24315;Name=AD08_RS24315;end_range=839,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS24315;old_locus_tag=AD08_4852;partial=true;pseudo=true;start_range=.,261 NZ_JHDJ01000003.1 Protein Homology CDS 261 839 . + 0 ID=cds-AD08_RS24315;Parent=gene-AD08_RS24315;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=839,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AD08_RS24315;partial=true;product=transposase;pseudo=true;start_range=.,261;transl_table=11 ##sequence-region NZ_JHDJ01000004.1 1 10921 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000004.1 RefSeq region 1 10921 . + . ID=NZ_JHDJ01000004.1:1..10921;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000004.1 RefSeq pseudogene 1 752 . - . ID=gene-AD08_RS24310;Name=AD08_RS24310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS24310;old_locus_tag=AD08_4853;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000004.1 Protein Homology CDS 1 752 . - 0 ID=cds-AD08_RS24310;Parent=gene-AD08_RS24310;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309255.1;locus_tag=AD08_RS24310;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000004.1 RefSeq gene 749 1399 . - . ID=gene-AD08_RS24305;Name=AD08_RS24305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24305;old_locus_tag=AD08_4854 NZ_JHDJ01000004.1 Protein Homology CDS 749 1399 . - 0 ID=cds-WP_032217523.1;Parent=gene-AD08_RS24305;Dbxref=Genbank:WP_032217523.1;Name=WP_032217523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309254.1;locus_tag=AD08_RS24305;product=hypothetical protein;protein_id=WP_032217523.1;transl_table=11 NZ_JHDJ01000004.1 RefSeq gene 1399 1962 . - . ID=gene-AD08_RS24300;Name=AD08_RS24300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24300;old_locus_tag=AD08_4855 NZ_JHDJ01000004.1 Protein Homology CDS 1399 1962 . - 0 ID=cds-WP_000829400.1;Parent=gene-AD08_RS24300;Dbxref=Genbank:WP_000829400.1;Name=WP_000829400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309253.1;locus_tag=AD08_RS24300;product=hypothetical protein;protein_id=WP_000829400.1;transl_table=11 NZ_JHDJ01000004.1 RefSeq gene 1946 2407 . - . ID=gene-AD08_RS24295;Name=AD08_RS24295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24295;old_locus_tag=AD08_4856 NZ_JHDJ01000004.1 Protein Homology CDS 1946 2407 . - 0 ID=cds-WP_001290750.1;Parent=gene-AD08_RS24295;Dbxref=Genbank:WP_001290750.1;Name=WP_001290750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309252.1;locus_tag=AD08_RS24295;product=hypothetical protein;protein_id=WP_001290750.1;transl_table=11 NZ_JHDJ01000004.1 RefSeq gene 2458 2850 . - . ID=gene-AD08_RS24290;Name=AD08_RS24290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24290;old_locus_tag=AD08_4857 NZ_JHDJ01000004.1 Protein Homology CDS 2458 2850 . - 0 ID=cds-WP_032217524.1;Parent=gene-AD08_RS24290;Dbxref=Genbank:WP_032217524.1;Name=WP_032217524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309251.1;locus_tag=AD08_RS24290;product=hypothetical protein;protein_id=WP_032217524.1;transl_table=11 NZ_JHDJ01000004.1 RefSeq gene 2905 4119 . - . ID=gene-AD08_RS24285;Name=AD08_RS24285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24285;old_locus_tag=AD08_4858 NZ_JHDJ01000004.1 Protein Homology CDS 2905 4119 . - 0 ID=cds-WP_032217525.1;Parent=gene-AD08_RS24285;Dbxref=Genbank:WP_032217525.1;Name=WP_032217525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309250.1;locus_tag=AD08_RS24285;product=N4-gp56 family major capsid protein;protein_id=WP_032217525.1;transl_table=11 NZ_JHDJ01000004.1 RefSeq gene 4142 5149 . - . ID=gene-AD08_RS24280;Name=AD08_RS24280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24280;old_locus_tag=AD08_4859 NZ_JHDJ01000004.1 Protein Homology CDS 4142 5149 . - 0 ID=cds-WP_032217526.1;Parent=gene-AD08_RS24280;Dbxref=Genbank:WP_032217526.1;Name=WP_032217526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309249.1;locus_tag=AD08_RS24280;product=hypothetical protein;protein_id=WP_032217526.1;transl_table=11 NZ_JHDJ01000004.1 RefSeq gene 5307 7451 . - . ID=gene-AD08_RS24275;Name=AD08_RS24275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24275;old_locus_tag=AD08_4860 NZ_JHDJ01000004.1 Protein Homology CDS 5307 7451 . - 0 ID=cds-WP_000787505.1;Parent=gene-AD08_RS24275;Dbxref=Genbank:WP_000787505.1;Name=WP_000787505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309248.1;locus_tag=AD08_RS24275;product=hypothetical protein;protein_id=WP_000787505.1;transl_table=11 NZ_JHDJ01000004.1 RefSeq gene 7451 9157 . - . ID=gene-AD08_RS24270;Name=AD08_RS24270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24270;old_locus_tag=AD08_4861 NZ_JHDJ01000004.1 Protein Homology CDS 7451 9157 . - 0 ID=cds-WP_000143995.1;Parent=gene-AD08_RS24270;Dbxref=Genbank:WP_000143995.1;Name=WP_000143995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309247.1;locus_tag=AD08_RS24270;product=hypothetical protein;protein_id=WP_000143995.1;transl_table=11 NZ_JHDJ01000004.1 RefSeq gene 9138 9944 . - . ID=gene-AD08_RS24265;Name=AD08_RS24265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24265;old_locus_tag=AD08_4863 NZ_JHDJ01000004.1 Protein Homology CDS 9138 9944 . - 0 ID=cds-WP_001539097.1;Parent=gene-AD08_RS24265;Dbxref=Genbank:WP_001539097.1;Name=WP_001539097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309246.1;locus_tag=AD08_RS24265;product=hypothetical protein;protein_id=WP_001539097.1;transl_table=11 NZ_JHDJ01000004.1 RefSeq gene 10246 10713 . - . ID=gene-AD08_RS24260;Name=AD08_RS24260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24260;old_locus_tag=AD08_4864 NZ_JHDJ01000004.1 Protein Homology CDS 10246 10713 . - 0 ID=cds-WP_001824833.1;Parent=gene-AD08_RS24260;Dbxref=Genbank:WP_001824833.1;Name=WP_001824833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016237848.1;locus_tag=AD08_RS24260;product=lysis protein;protein_id=WP_001824833.1;transl_table=11 NZ_JHDJ01000004.1 RefSeq gene 10721 10852 . - . ID=gene-AD08_RS31470;Name=AD08_RS31470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31470;old_locus_tag=AD08_4865 NZ_JHDJ01000004.1 Protein Homology CDS 10721 10852 . - 0 ID=cds-WP_001280930.1;Parent=gene-AD08_RS31470;Dbxref=Genbank:WP_001280930.1;Name=WP_001280930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502641.1;locus_tag=AD08_RS31470;product=hypothetical protein;protein_id=WP_001280930.1;transl_table=11 ##sequence-region NZ_JHDJ01000005.1 1 375 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000005.1 RefSeq region 1 375 . + . ID=NZ_JHDJ01000005.1:1..375;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000005.1 RefSeq gene 1 375 . - . ID=gene-AD08_RS0124380;Name=AD08_RS0124380;end_range=375,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124380;partial=true;start_range=.,1 NZ_JHDJ01000005.1 Protein Homology CDS 1 375 . - 2 ID=cds-WP_032217528.1;Parent=gene-AD08_RS0124380;Dbxref=Genbank:WP_032217528.1;Name=WP_032217528.1;end_range=375,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027667.1;locus_tag=AD08_RS0124380;partial=true;product=hypothetical protein;protein_id=WP_032217528.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDJ01000006.1 1 2013 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000006.1 RefSeq region 1 2013 . + . ID=NZ_JHDJ01000006.1:1..2013;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000006.1 RefSeq gene 1 374 . - . ID=gene-AD08_RS24250;Name=AD08_RS24250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24250;old_locus_tag=AD08_4866;partial=true;start_range=.,1 NZ_JHDJ01000006.1 Protein Homology CDS 1 374 . - 0 ID=cds-WP_032217529.1;Parent=gene-AD08_RS24250;Dbxref=Genbank:WP_032217529.1;Name=WP_032217529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310921.1;locus_tag=AD08_RS24250;partial=true;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_032217529.1;start_range=.,1;transl_table=11 NZ_JHDJ01000006.1 RefSeq gene 422 1777 . - . ID=gene-AD08_RS24245;Name=AD08_RS24245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24245;old_locus_tag=AD08_4867 NZ_JHDJ01000006.1 Protein Homology CDS 422 1777 . - 0 ID=cds-WP_032217530.1;Parent=gene-AD08_RS24245;Dbxref=Genbank:WP_032217530.1;Name=WP_032217530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310922.1;locus_tag=AD08_RS24245;product=PTS galactitol transporter subunit IIC;protein_id=WP_032217530.1;transl_table=11 NZ_JHDJ01000006.1 RefSeq gene 1781 2013 . - . ID=gene-AD08_RS24240;Name=gatB;end_range=2013,.;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=AD08_RS24240;old_locus_tag=AD08_4868;partial=true NZ_JHDJ01000006.1 Protein Homology CDS 1781 2013 . - 2 ID=cds-WP_032217531.1;Parent=gene-AD08_RS24240;Dbxref=Genbank:WP_032217531.1;Name=WP_032217531.1;end_range=2013,.;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416596.1;locus_tag=AD08_RS24240;partial=true;product=PTS galactitol transporter subunit IIB;protein_id=WP_032217531.1;transl_table=11 ##sequence-region NZ_JHDJ01000007.1 1 2052 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000007.1 RefSeq region 1 2052 . + . ID=NZ_JHDJ01000007.1:1..2052;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000007.1 RefSeq gene 527 637 . - . ID=gene-AD08_RS31475;Name=AD08_RS31475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31475 NZ_JHDJ01000007.1 Protein Homology CDS 527 637 . - 0 ID=cds-WP_032082692.1;Parent=gene-AD08_RS31475;Dbxref=Genbank:WP_032082692.1;Name=WP_032082692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518767.1;locus_tag=AD08_RS31475;product=hypothetical protein;protein_id=WP_032082692.1;transl_table=11 NZ_JHDJ01000007.1 RefSeq gene 690 1094 . - . ID=gene-AD08_RS24235;Name=AD08_RS24235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24235;old_locus_tag=AD08_4869 NZ_JHDJ01000007.1 Protein Homology CDS 690 1094 . - 0 ID=cds-WP_000373101.1;Parent=gene-AD08_RS24235;Dbxref=Genbank:WP_000373101.1;Name=WP_000373101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415679.1;locus_tag=AD08_RS24235;product=DUF1398 domain-containing protein;protein_id=WP_000373101.1;transl_table=11 NZ_JHDJ01000007.1 RefSeq gene 1315 2046 . - . ID=gene-AD08_RS24230;Name=AD08_RS24230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24230;old_locus_tag=AD08_4870 NZ_JHDJ01000007.1 Protein Homology CDS 1315 2046 . - 0 ID=cds-WP_000332303.1;Parent=gene-AD08_RS24230;Dbxref=Genbank:WP_000332303.1;Name=WP_000332303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415680.1;locus_tag=AD08_RS24230;product=DNA-binding transcriptional repressor BluR;protein_id=WP_000332303.1;transl_table=11 ##sequence-region NZ_JHDJ01000008.1 1 2759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000008.1 RefSeq region 1 2759 . + . ID=NZ_JHDJ01000008.1:1..2759;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000008.1 RefSeq gene 176 1177 . - . ID=gene-AD08_RS0124385;Name=AD08_RS0124385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124385 NZ_JHDJ01000008.1 Protein Homology CDS 176 1177 . - 0 ID=cds-WP_032217532.1;Parent=gene-AD08_RS0124385;Dbxref=Genbank:WP_032217532.1;Name=WP_032217532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415548.1;locus_tag=AD08_RS0124385;product=hypothetical protein;protein_id=WP_032217532.1;transl_table=11 NZ_JHDJ01000008.1 RefSeq gene 1158 1481 . - . ID=gene-AD08_RS24225;Name=AD08_RS24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24225;old_locus_tag=AD08_4872 NZ_JHDJ01000008.1 Protein Homology CDS 1158 1481 . - 0 ID=cds-WP_000389396.1;Parent=gene-AD08_RS24225;Dbxref=Genbank:WP_000389396.1;Name=WP_000389396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389393.1;locus_tag=AD08_RS24225;product=ACP S-malonyltransferase;protein_id=WP_000389396.1;transl_table=11 NZ_JHDJ01000008.1 RefSeq gene 1567 1866 . + . ID=gene-AD08_RS31480;Name=AD08_RS31480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31480;old_locus_tag=AD08_4873 NZ_JHDJ01000008.1 Protein Homology CDS 1567 1866 . + 0 ID=cds-WP_032217533.1;Parent=gene-AD08_RS31480;Dbxref=Genbank:WP_032217533.1;Name=WP_032217533.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013677.1;locus_tag=AD08_RS31480;product=transposase;protein_id=WP_032217533.1;transl_table=11 NZ_JHDJ01000008.1 RefSeq gene 1863 2729 . + . ID=gene-AD08_RS24215;Name=AD08_RS24215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24215;old_locus_tag=AD08_4874 NZ_JHDJ01000008.1 Protein Homology CDS 1863 2729 . + 0 ID=cds-WP_000878218.1;Parent=gene-AD08_RS24215;Dbxref=Genbank:WP_000878218.1;Name=WP_000878218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707076.1;locus_tag=AD08_RS24215;product=IS3 family transposase;protein_id=WP_000878218.1;transl_table=11 ##sequence-region NZ_JHDJ01000009.1 1 6701 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000009.1 RefSeq region 1 6701 . + . ID=NZ_JHDJ01000009.1:1..6701;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000009.1 RefSeq pseudogene 1 208 . - . ID=gene-AD08_RS24210;Name=AD08_RS24210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS24210;old_locus_tag=AD08_4875;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000009.1 Protein Homology CDS 1 208 . - 0 ID=cds-AD08_RS24210;Parent=gene-AD08_RS24210;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309807.1;locus_tag=AD08_RS24210;partial=true;product=site-specific DNA-methyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000009.1 RefSeq gene 359 556 . - . ID=gene-AD08_RS24205;Name=AD08_RS24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24205;old_locus_tag=AD08_4876 NZ_JHDJ01000009.1 Protein Homology CDS 359 556 . - 0 ID=cds-WP_001532433.1;Parent=gene-AD08_RS24205;Dbxref=Genbank:WP_001532433.1;Name=WP_001532433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309806.2;locus_tag=AD08_RS24205;product=hypothetical protein;protein_id=WP_001532433.1;transl_table=11 NZ_JHDJ01000009.1 RefSeq gene 1064 1777 . + . ID=gene-AD08_RS0124390;Name=AD08_RS0124390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124390 NZ_JHDJ01000009.1 Protein Homology CDS 1064 1777 . + 0 ID=cds-WP_001422966.1;Parent=gene-AD08_RS0124390;Dbxref=Genbank:WP_001422966.1;Name=WP_001422966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277938.1;locus_tag=AD08_RS0124390;product=hypothetical protein;protein_id=WP_001422966.1;transl_table=11 NZ_JHDJ01000009.1 RefSeq gene 1781 2224 . + . ID=gene-AD08_RS24200;Name=AD08_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24200;old_locus_tag=AD08_4878 NZ_JHDJ01000009.1 GeneMarkS-2+ CDS 1781 2224 . + 0 ID=cds-WP_000925343.1;Parent=gene-AD08_RS24200;Dbxref=Genbank:WP_000925343.1;Name=WP_000925343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS24200;product=hypothetical protein;protein_id=WP_000925343.1;transl_table=11 NZ_JHDJ01000009.1 RefSeq gene 2248 2610 . - . ID=gene-AD08_RS0124395;Name=AD08_RS0124395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124395 NZ_JHDJ01000009.1 Protein Homology CDS 2248 2610 . - 0 ID=cds-WP_001204748.1;Parent=gene-AD08_RS0124395;Dbxref=Genbank:WP_001204748.1;Name=WP_001204748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008323293.1;locus_tag=AD08_RS0124395;product=antitermination protein Q;protein_id=WP_001204748.1;transl_table=11 NZ_JHDJ01000009.1 RefSeq gene 2628 3617 . - . ID=gene-AD08_RS24195;Name=AD08_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24195;old_locus_tag=AD08_4880 NZ_JHDJ01000009.1 Protein Homology CDS 2628 3617 . - 0 ID=cds-WP_024183840.1;Parent=gene-AD08_RS24195;Dbxref=Genbank:WP_024183840.1;Name=WP_024183840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764249.1;locus_tag=AD08_RS24195;product=DUF968 domain-containing protein;protein_id=WP_024183840.1;transl_table=11 NZ_JHDJ01000009.1 RefSeq gene 3625 4440 . - . ID=gene-AD08_RS24190;Name=AD08_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24190;old_locus_tag=AD08_4881 NZ_JHDJ01000009.1 Protein Homology CDS 3625 4440 . - 0 ID=cds-WP_001072669.1;Parent=gene-AD08_RS24190;Dbxref=Genbank:WP_001072669.1;Name=WP_001072669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001072668.1;locus_tag=AD08_RS24190;product=KilA-N domain-containing protein;protein_id=WP_001072669.1;transl_table=11 NZ_JHDJ01000009.1 RefSeq gene 4603 4998 . - . ID=gene-AD08_RS24185;Name=AD08_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24185;old_locus_tag=AD08_4882 NZ_JHDJ01000009.1 Protein Homology CDS 4603 4998 . - 0 ID=cds-WP_000767110.1;Parent=gene-AD08_RS24185;Dbxref=Genbank:WP_000767110.1;Name=WP_000767110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767123.1;locus_tag=AD08_RS24185;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_000767110.1;transl_table=11 NZ_JHDJ01000009.1 RefSeq gene 4995 5321 . - . ID=gene-AD08_RS24180;Name=AD08_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24180;old_locus_tag=AD08_4883 NZ_JHDJ01000009.1 Protein Homology CDS 4995 5321 . - 0 ID=cds-WP_000210152.1;Parent=gene-AD08_RS24180;Dbxref=Genbank:WP_000210152.1;Name=WP_000210152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003878599.1;locus_tag=AD08_RS24180;product=LexA family transcriptional regulator;protein_id=WP_000210152.1;transl_table=11 NZ_JHDJ01000009.1 RefSeq gene 5318 5971 . - . ID=gene-AD08_RS24175;Name=AD08_RS24175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24175;old_locus_tag=AD08_4884 NZ_JHDJ01000009.1 Protein Homology CDS 5318 5971 . - 0 ID=cds-WP_001409632.1;Parent=gene-AD08_RS24175;Dbxref=Genbank:WP_001409632.1;Name=WP_001409632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001378271.1;locus_tag=AD08_RS24175;product=phage N-6-adenine-methyltransferase;protein_id=WP_001409632.1;transl_table=11 NZ_JHDJ01000009.1 RefSeq gene 5971 6465 . - . ID=gene-AD08_RS0124400;Name=AD08_RS0124400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124400 NZ_JHDJ01000009.1 Protein Homology CDS 5971 6465 . - 0 ID=cds-WP_012601564.1;Parent=gene-AD08_RS0124400;Dbxref=Genbank:WP_012601564.1;Name=WP_012601564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416858.1;locus_tag=AD08_RS0124400;product=PerC family transcriptional regulator;protein_id=WP_012601564.1;transl_table=11 NZ_JHDJ01000009.1 RefSeq pseudogene 6462 6701 . - . ID=gene-AD08_RS30890;Name=AD08_RS30890;end_range=6701,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30890;old_locus_tag=AD08_4886;partial=true;pseudo=true NZ_JHDJ01000009.1 GeneMarkS-2+ CDS 6462 6701 . - 0 ID=cds-AD08_RS30890;Parent=gene-AD08_RS30890;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6701,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS30890;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000010.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000010.1 RefSeq region 1 2047 . + . ID=NZ_JHDJ01000010.1:1..2047;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000010.1 RefSeq gene 1 269 . - . ID=gene-AD08_RS24165;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=AD08_RS24165;old_locus_tag=AD08_4887;partial=true;start_range=.,1 NZ_JHDJ01000010.1 Protein Homology CDS 1 269 . - 0 ID=cds-WP_032217536.1;Parent=gene-AD08_RS24165;Dbxref=Genbank:WP_032217536.1;Name=WP_032217536.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418531.1;locus_tag=AD08_RS24165;partial=true;product=VOC family metalloprotein YjdN;protein_id=WP_032217536.1;start_range=.,1;transl_table=11 NZ_JHDJ01000010.1 RefSeq gene 527 862 . - . ID=gene-AD08_RS24160;Name=AD08_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24160;old_locus_tag=AD08_4888 NZ_JHDJ01000010.1 Protein Homology CDS 527 862 . - 0 ID=cds-WP_001300891.1;Parent=gene-AD08_RS24160;Dbxref=Genbank:WP_001300891.1;Name=WP_001300891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004856597.1;locus_tag=AD08_RS24160;product=phnA family protein;protein_id=WP_001300891.1;transl_table=11 NZ_JHDJ01000010.1 RefSeq pseudogene 1263 2047 . + . ID=gene-AD08_RS24155;Name=AD08_RS24155;end_range=2047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS24155;old_locus_tag=AD08_4889;partial=true;pseudo=true NZ_JHDJ01000010.1 Protein Homology CDS 1263 2047 . + 0 ID=cds-AD08_RS24155;Parent=gene-AD08_RS24155;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418533.1;locus_tag=AD08_RS24155;partial=true;product=clamp-binding protein CrfC;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000011.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000011.1 RefSeq region 1 2047 . + . ID=NZ_JHDJ01000011.1:1..2047;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000011.1 RefSeq gene 48 122 . + . ID=gene-AD08_RS24150;Name=AD08_RS24150;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS24150;old_locus_tag=AD08_4890 NZ_JHDJ01000011.1 tRNAscan-SE tRNA 48 122 . + . ID=rna-AD08_RS24150;Parent=gene-AD08_RS24150;anticodon=(pos:80..82);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS24150;product=tRNA-Gln NZ_JHDJ01000011.1 tRNAscan-SE exon 48 122 . + . ID=exon-AD08_RS24150-1;Parent=rna-AD08_RS24150;anticodon=(pos:80..82);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS24150;product=tRNA-Gln NZ_JHDJ01000011.1 RefSeq gene 160 234 . + . ID=gene-AD08_RS24145;Name=AD08_RS24145;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS24145;old_locus_tag=AD08_4891 NZ_JHDJ01000011.1 tRNAscan-SE tRNA 160 234 . + . ID=rna-AD08_RS24145;Parent=gene-AD08_RS24145;anticodon=(pos:192..194);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS24145;product=tRNA-Gln NZ_JHDJ01000011.1 tRNAscan-SE exon 160 234 . + . ID=exon-AD08_RS24145-1;Parent=rna-AD08_RS24145;anticodon=(pos:192..194);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS24145;product=tRNA-Gln NZ_JHDJ01000011.1 RefSeq gene 388 1563 . - . ID=gene-AD08_RS24140;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AD08_RS24140;old_locus_tag=AD08_4892 NZ_JHDJ01000011.1 Protein Homology CDS 388 1563 . - 0 ID=cds-WP_000184541.1;Parent=gene-AD08_RS24140;Dbxref=Genbank:WP_000184541.1;Name=WP_000184541.1;gbkey=CDS;gene=ubiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AD08_RS24140;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=WP_000184541.1;transl_table=11 NZ_JHDJ01000011.1 RefSeq pseudogene 1709 2047 . + . ID=gene-AD08_RS24135;Name=AD08_RS24135;end_range=2047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS24135;old_locus_tag=AD08_4893;partial=true;pseudo=true NZ_JHDJ01000011.1 Protein Homology CDS 1709 2047 . + 0 ID=cds-AD08_RS24135;Parent=gene-AD08_RS24135;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308726.1;locus_tag=AD08_RS24135;partial=true;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000012.1 1 1712 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000012.1 RefSeq region 1 1712 . + . ID=NZ_JHDJ01000012.1:1..1712;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000012.1 RefSeq gene 51 245 . + . ID=gene-AD08_RS30035;Name=AD08_RS30035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30035 NZ_JHDJ01000012.1 Protein Homology CDS 51 245 . + 0 ID=cds-WP_001415592.1;Parent=gene-AD08_RS30035;Dbxref=Genbank:WP_001415592.1;Name=WP_001415592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001500139.1;locus_tag=AD08_RS30035;product=hypothetical protein;protein_id=WP_001415592.1;transl_table=11 NZ_JHDJ01000012.1 RefSeq gene 467 790 . + . ID=gene-AD08_RS24130;Name=AD08_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24130;old_locus_tag=AD08_4894 NZ_JHDJ01000012.1 Protein Homology CDS 467 790 . + 0 ID=cds-WP_000533253.1;Parent=gene-AD08_RS24130;Dbxref=Genbank:WP_000533253.1;Name=WP_000533253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001316561.1;locus_tag=AD08_RS24130;product=hypothetical protein;protein_id=WP_000533253.1;transl_table=11 NZ_JHDJ01000012.1 RefSeq gene 849 1091 . + . ID=gene-AD08_RS24125;Name=AD08_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24125;old_locus_tag=AD08_4895 NZ_JHDJ01000012.1 Protein Homology CDS 849 1091 . + 0 ID=cds-WP_000540588.1;Parent=gene-AD08_RS24125;Dbxref=Genbank:WP_000540588.1;Name=WP_000540588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001398403.1;locus_tag=AD08_RS24125;product=hypothetical protein;protein_id=WP_000540588.1;transl_table=11 ##sequence-region NZ_JHDJ01000013.1 1 2448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000013.1 RefSeq region 1 2448 . + . ID=NZ_JHDJ01000013.1:1..2448;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000013.1 RefSeq pseudogene 1 1802 . - . ID=gene-AD08_RS24120;Name=AD08_RS24120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS24120;old_locus_tag=AD08_4899;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000013.1 Protein Homology CDS 1 1802 . - 0 ID=cds-AD08_RS24120;Parent=gene-AD08_RS24120;Note=internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_304285.1;locus_tag=AD08_RS24120;partial=true;product=phage tail tape measure protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000013.1 RefSeq gene 1850 2059 . - . ID=gene-AD08_RS0124415;Name=AD08_RS0124415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124415 NZ_JHDJ01000013.1 Protein Homology CDS 1850 2059 . - 0 ID=cds-WP_001513217.1;Parent=gene-AD08_RS0124415;Dbxref=Genbank:WP_001513217.1;Name=WP_001513217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309578.2;locus_tag=AD08_RS0124415;product=DUF4035 domain-containing protein;protein_id=WP_001513217.1;transl_table=11 NZ_JHDJ01000013.1 RefSeq gene 2155 2448 . - . ID=gene-AD08_RS24115;Name=AD08_RS24115;end_range=2448,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24115;old_locus_tag=AD08_4901;partial=true NZ_JHDJ01000013.1 Protein Homology CDS 2155 2448 . - 0 ID=cds-WP_000295573.1;Parent=gene-AD08_RS24115;Dbxref=Genbank:WP_000295573.1;Name=WP_000295573.1;end_range=2448,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309577.1;locus_tag=AD08_RS24115;partial=true;product=hypothetical protein;protein_id=WP_000295573.1;transl_table=11 ##sequence-region NZ_JHDJ01000014.1 1 301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000014.1 RefSeq region 1 301 . + . ID=NZ_JHDJ01000014.1:1..301;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 ##sequence-region NZ_JHDJ01000015.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000015.1 RefSeq region 1 2047 . + . ID=NZ_JHDJ01000015.1:1..2047;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000015.1 RefSeq pseudogene 1 292 . - . ID=gene-AD08_RS24110;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=pseudogene;locus_tag=AD08_RS24110;old_locus_tag=AD08_4902;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000015.1 Protein Homology CDS 1 292 . - 0 ID=cds-AD08_RS24110;Parent=gene-AD08_RS24110;Note=membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=mltA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311700.1;locus_tag=AD08_RS24110;partial=true;product=murein transglycosylase A;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000015.1 RefSeq gene 501 577 . + . ID=gene-AD08_RS24105;Name=AD08_RS24105;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS24105;old_locus_tag=AD08_4903 NZ_JHDJ01000015.1 tRNAscan-SE tRNA 501 577 . + . ID=rna-AD08_RS24105;Parent=gene-AD08_RS24105;anticodon=(pos:535..537);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS24105;product=tRNA-Met NZ_JHDJ01000015.1 tRNAscan-SE exon 501 577 . + . ID=exon-AD08_RS24105-1;Parent=rna-AD08_RS24105;anticodon=(pos:535..537);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS24105;product=tRNA-Met NZ_JHDJ01000015.1 RefSeq gene 651 1904 . - . ID=gene-AD08_RS24100;Name=AD08_RS24100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24100;old_locus_tag=AD08_4904 NZ_JHDJ01000015.1 Protein Homology CDS 651 1904 . - 0 ID=cds-WP_000016907.1;Parent=gene-AD08_RS24100;Dbxref=Genbank:WP_000016907.1;Name=WP_000016907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311701.2;locus_tag=AD08_RS24100;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000016907.1;transl_table=11 ##sequence-region NZ_JHDJ01000016.1 1 3932 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000016.1 RefSeq region 1 3932 . + . ID=NZ_JHDJ01000016.1:1..3932;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000016.1 RefSeq gene 238 768 . - . ID=gene-AD08_RS30045;Name=AD08_RS30045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30045;old_locus_tag=AD08_4905 NZ_JHDJ01000016.1 Protein Homology CDS 238 768 . - 0 ID=cds-WP_077698986.1;Parent=gene-AD08_RS30045;Dbxref=Genbank:WP_077698986.1;Name=WP_077698986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041955.1;locus_tag=AD08_RS30045;product=YdfR family protein;protein_id=WP_077698986.1;transl_table=11 NZ_JHDJ01000016.1 RefSeq gene 773 988 . - . ID=gene-AD08_RS24095;Name=AD08_RS24095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24095;old_locus_tag=AD08_4906 NZ_JHDJ01000016.1 Protein Homology CDS 773 988 . - 0 ID=cds-WP_000284510.1;Parent=gene-AD08_RS24095;Dbxref=Genbank:WP_000284510.1;Name=WP_000284510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309239.1;locus_tag=AD08_RS24095;product=holin;protein_id=WP_000284510.1;transl_table=11 NZ_JHDJ01000016.1 RefSeq gene 1064 1354 . - . ID=gene-AD08_RS24090;Name=AD08_RS24090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24090;old_locus_tag=AD08_4907 NZ_JHDJ01000016.1 Protein Homology CDS 1064 1354 . - 0 ID=cds-WP_001824734.1;Parent=gene-AD08_RS24090;Dbxref=Genbank:WP_001824734.1;Name=WP_001824734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232128.1;locus_tag=AD08_RS24090;product=DUF826 domain-containing protein;protein_id=WP_001824734.1;transl_table=11 NZ_JHDJ01000016.1 RefSeq gene 1380 1574 . - . ID=gene-AD08_RS0124425;Name=AD08_RS0124425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124425 NZ_JHDJ01000016.1 Protein Homology CDS 1380 1574 . - 0 ID=cds-WP_000142785.1;Parent=gene-AD08_RS0124425;Dbxref=Genbank:WP_000142785.1;Name=WP_000142785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000142785.1;locus_tag=AD08_RS0124425;product=DUF1378 family protein;protein_id=WP_000142785.1;transl_table=11 NZ_JHDJ01000016.1 RefSeq gene 1711 3672 . - . ID=gene-AD08_RS24085;Name=AD08_RS24085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24085;old_locus_tag=AD08_4909 NZ_JHDJ01000016.1 Protein Homology CDS 1711 3672 . - 0 ID=cds-WP_032217539.1;Parent=gene-AD08_RS24085;Dbxref=Genbank:WP_032217539.1;Name=WP_032217539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244528.1;locus_tag=AD08_RS24085;product=SASA family carbohydrate esterase;protein_id=WP_032217539.1;transl_table=11 ##sequence-region NZ_JHDJ01000017.1 1 3335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000017.1 RefSeq region 1 3335 . + . ID=NZ_JHDJ01000017.1:1..3335;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000017.1 RefSeq pseudogene 1 364 . - . ID=gene-AD08_RS24080;Name=AD08_RS24080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS24080;old_locus_tag=AD08_4910;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000017.1 GeneMarkS-2+ CDS 1 364 . - 0 ID=cds-AD08_RS24080;Parent=gene-AD08_RS24080;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS24080;partial=true;product=DUF4376 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000017.1 RefSeq pseudogene 655 2400 . - . ID=gene-AD08_RS24075;Name=AD08_RS24075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS24075;old_locus_tag=AD08_4911;partial=true;pseudo=true;start_range=.,655 NZ_JHDJ01000017.1 Protein Homology CDS 655 2400 . - 0 ID=cds-AD08_RS24075;Parent=gene-AD08_RS24075;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539085.1;locus_tag=AD08_RS24075;partial=true;product=hypothetical protein;pseudo=true;start_range=.,655;transl_table=11 NZ_JHDJ01000017.1 RefSeq gene 2397 3047 . - . ID=gene-AD08_RS24070;Name=AD08_RS24070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24070;old_locus_tag=AD08_4912 NZ_JHDJ01000017.1 Protein Homology CDS 2397 3047 . - 0 ID=cds-WP_032217523.1-2;Parent=gene-AD08_RS24070;Dbxref=Genbank:WP_032217523.1;Name=WP_032217523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309254.1;locus_tag=AD08_RS24070;product=hypothetical protein;protein_id=WP_032217523.1;transl_table=11 NZ_JHDJ01000017.1 RefSeq gene 3047 3335 . - . ID=gene-AD08_RS0124430;Name=AD08_RS0124430;end_range=3335,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124430;partial=true NZ_JHDJ01000017.1 Protein Homology CDS 3047 3335 . - 1 ID=cds-WP_032217542.1;Parent=gene-AD08_RS0124430;Dbxref=Genbank:WP_032217542.1;Name=WP_032217542.1;end_range=3335,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309253.1;locus_tag=AD08_RS0124430;partial=true;product=hypothetical protein;protein_id=WP_032217542.1;transl_table=11 ##sequence-region NZ_JHDJ01000018.1 1 547 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000018.1 RefSeq region 1 547 . + . ID=NZ_JHDJ01000018.1:1..547;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000018.1 RefSeq gene 259 335 . + . ID=gene-AD08_RS24065;Name=AD08_RS24065;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS24065;old_locus_tag=AD08_4914 NZ_JHDJ01000018.1 tRNAscan-SE tRNA 259 335 . + . ID=rna-AD08_RS24065;Parent=gene-AD08_RS24065;anticodon=(pos:293..295);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS24065;product=tRNA-Arg NZ_JHDJ01000018.1 tRNAscan-SE exon 259 335 . + . ID=exon-AD08_RS24065-1;Parent=rna-AD08_RS24065;anticodon=(pos:293..295);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS24065;product=tRNA-Arg ##sequence-region NZ_JHDJ01000019.1 1 3152 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000019.1 RefSeq region 1 3152 . + . ID=NZ_JHDJ01000019.1:1..3152;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000019.1 RefSeq pseudogene 1 1822 . + . ID=gene-AD08_RS27620;Name=AD08_RS27620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS27620;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000019.1 Protein Homology CDS 1 1822 . + 2 ID=cds-AD08_RS27620;Parent=gene-AD08_RS27620;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001365916.1;locus_tag=AD08_RS27620;partial=true;product=phage portal protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000019.1 RefSeq gene 1819 2145 . + . ID=gene-AD08_RS24050;Name=AD08_RS24050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24050;old_locus_tag=AD08_4917 NZ_JHDJ01000019.1 Protein Homology CDS 1819 2145 . + 0 ID=cds-WP_032217547.1;Parent=gene-AD08_RS24050;Dbxref=Genbank:WP_032217547.1;Name=WP_032217547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309823.1;locus_tag=AD08_RS24050;product=phage gp6-like head-tail connector protein;protein_id=WP_032217547.1;transl_table=11 NZ_JHDJ01000019.1 RefSeq gene 2156 2506 . + . ID=gene-AD08_RS24045;Name=AD08_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24045;old_locus_tag=AD08_4918 NZ_JHDJ01000019.1 Protein Homology CDS 2156 2506 . + 0 ID=cds-WP_001007900.1;Parent=gene-AD08_RS24045;Dbxref=Genbank:WP_001007900.1;Name=WP_001007900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309573.1;locus_tag=AD08_RS24045;product=phage head closure protein;protein_id=WP_001007900.1;transl_table=11 NZ_JHDJ01000019.1 RefSeq gene 2503 2949 . + . ID=gene-AD08_RS24040;Name=AD08_RS24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24040;old_locus_tag=AD08_4919 NZ_JHDJ01000019.1 Protein Homology CDS 2503 2949 . + 0 ID=cds-WP_032217548.1;Parent=gene-AD08_RS24040;Dbxref=Genbank:WP_032217548.1;Name=WP_032217548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309825.1;locus_tag=AD08_RS24040;product=HK97 gp10 family phage protein;protein_id=WP_032217548.1;transl_table=11 NZ_JHDJ01000019.1 RefSeq gene 2946 3152 . + . ID=gene-AD08_RS24035;Name=AD08_RS24035;end_range=3152,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24035;old_locus_tag=AD08_4920;partial=true NZ_JHDJ01000019.1 Protein Homology CDS 2946 3152 . + 0 ID=cds-WP_032217549.1;Parent=gene-AD08_RS24035;Dbxref=Genbank:WP_032217549.1;Name=WP_032217549.1;end_range=3152,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309575.1;locus_tag=AD08_RS24035;partial=true;product=DUF3168 domain-containing protein;protein_id=WP_032217549.1;transl_table=11 ##sequence-region NZ_JHDJ01000020.1 1 1387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000020.1 RefSeq region 1 1387 . + . ID=NZ_JHDJ01000020.1:1..1387;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000020.1 RefSeq gene 92 292 . + . ID=gene-AD08_RS24030;Name=AD08_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24030;old_locus_tag=AD08_4921 NZ_JHDJ01000020.1 Protein Homology CDS 92 292 . + 0 ID=cds-WP_000095740.1;Parent=gene-AD08_RS24030;Dbxref=Genbank:WP_000095740.1;Name=WP_000095740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000095744.1;locus_tag=AD08_RS24030;product=YlcI/YnfO family protein;protein_id=WP_000095740.1;transl_table=11 NZ_JHDJ01000020.1 RefSeq gene 491 715 . - . ID=gene-AD08_RS24025;Name=AD08_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS24025;old_locus_tag=AD08_4922 NZ_JHDJ01000020.1 Protein Homology CDS 491 715 . - 0 ID=cds-WP_032217550.1;Parent=gene-AD08_RS24025;Dbxref=Genbank:WP_032217550.1;Name=WP_032217550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309563.1;locus_tag=AD08_RS24025;product=hypothetical protein;protein_id=WP_032217550.1;transl_table=11 NZ_JHDJ01000020.1 RefSeq gene 739 1206 . - . ID=gene-AD08_RS30055;Name=AD08_RS30055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30055;old_locus_tag=AD08_4923 NZ_JHDJ01000020.1 Protein Homology CDS 739 1206 . - 0 ID=cds-WP_032217551.1;Parent=gene-AD08_RS30055;Dbxref=Genbank:WP_032217551.1;Name=WP_032217551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309813.1;locus_tag=AD08_RS30055;product=lysis protein;protein_id=WP_032217551.1;transl_table=11 NZ_JHDJ01000020.1 RefSeq gene 1214 1345 . - . ID=gene-AD08_RS31485;Name=AD08_RS31485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31485;old_locus_tag=AD08_4924 NZ_JHDJ01000020.1 Protein Homology CDS 1214 1345 . - 0 ID=cds-WP_001280930.1-2;Parent=gene-AD08_RS31485;Dbxref=Genbank:WP_001280930.1;Name=WP_001280930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502641.1;locus_tag=AD08_RS31485;product=hypothetical protein;protein_id=WP_001280930.1;transl_table=11 ##sequence-region NZ_JHDJ01000021.1 1 1854 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000021.1 RefSeq region 1 1854 . + . ID=NZ_JHDJ01000021.1:1..1854;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000021.1 RefSeq gene 31 216 . - . ID=gene-AD08_RS31490;Name=AD08_RS31490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31490 NZ_JHDJ01000021.1 Protein Homology CDS 31 216 . - 0 ID=cds-WP_032217790.1;Parent=gene-AD08_RS31490;Dbxref=Genbank:WP_032217790.1;Name=WP_032217790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309814.1;locus_tag=AD08_RS31490;product=membrane protein;protein_id=WP_032217790.1;transl_table=11 NZ_JHDJ01000021.1 RefSeq gene 439 570 . - . ID=gene-AD08_RS31495;Name=AD08_RS31495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31495;old_locus_tag=AD08_4926 NZ_JHDJ01000021.1 Protein Homology CDS 439 570 . - 0 ID=cds-WP_001280932.1;Parent=gene-AD08_RS31495;Dbxref=Genbank:WP_001280932.1;Name=WP_001280932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502641.1;locus_tag=AD08_RS31495;product=hypothetical protein;protein_id=WP_001280932.1;transl_table=11 NZ_JHDJ01000021.1 RefSeq gene 585 767 . - . ID=gene-AD08_RS30065;Name=AD08_RS30065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30065;old_locus_tag=AD08_4927 NZ_JHDJ01000021.1 Protein Homology CDS 585 767 . - 0 ID=cds-WP_021566721.1;Parent=gene-AD08_RS30065;Dbxref=Genbank:WP_021566721.1;Name=WP_021566721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310767.3;locus_tag=AD08_RS30065;product=hypothetical protein;protein_id=WP_021566721.1;transl_table=11 NZ_JHDJ01000021.1 RefSeq gene 924 1457 . - . ID=gene-AD08_RS23995;Name=AD08_RS23995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23995;old_locus_tag=AD08_4928 NZ_JHDJ01000021.1 Protein Homology CDS 924 1457 . - 0 ID=cds-WP_032217553.1;Parent=gene-AD08_RS23995;Dbxref=Genbank:WP_032217553.1;Name=WP_032217553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309559.1;locus_tag=AD08_RS23995;product=lysozyme;protein_id=WP_032217553.1;transl_table=11 NZ_JHDJ01000021.1 RefSeq pseudogene 1567 1758 . + . ID=gene-AD08_RS27645;Name=AD08_RS27645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS27645;partial=true;pseudo=true;start_range=.,1567 NZ_JHDJ01000021.1 Protein Homology CDS 1567 1758 . + 0 ID=cds-AD08_RS27645;Parent=gene-AD08_RS27645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001501.1;locus_tag=AD08_RS27645;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1567;transl_table=11 ##sequence-region NZ_JHDJ01000022.1 1 1002 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000022.1 RefSeq region 1 1002 . + . ID=NZ_JHDJ01000022.1:1..1002;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000022.1 RefSeq pseudogene 622 1002 . + . ID=gene-AD08_RS23990;Name=AD08_RS23990;end_range=1002,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS23990;old_locus_tag=AD08_4930;partial=true;pseudo=true NZ_JHDJ01000022.1 Protein Homology CDS 622 1002 . + 0 ID=cds-AD08_RS23990;Parent=gene-AD08_RS23990;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=1002,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS23990;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JHDJ01000022.1 cmsearch sequence_feature 903 1002 . + . ID=id-AD08_RS23990;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;end_range=1002,.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS23990;partial=true ##sequence-region NZ_JHDJ01000023.1 1 3565 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000023.1 RefSeq region 1 3565 . + . ID=NZ_JHDJ01000023.1:1..3565;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000023.1 RefSeq pseudogene 1 207 . - . ID=gene-AD08_RS23985;Name=AD08_RS23985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS23985;old_locus_tag=AD08_4931;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000023.1 Protein Homology CDS 1 207 . - 0 ID=cds-AD08_RS23985;Parent=gene-AD08_RS23985;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309575.1;locus_tag=AD08_RS23985;partial=true;product=DUF3168 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000023.1 RefSeq gene 204 650 . - . ID=gene-AD08_RS23980;Name=AD08_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23980;old_locus_tag=AD08_4932 NZ_JHDJ01000023.1 Protein Homology CDS 204 650 . - 0 ID=cds-WP_000573362.1;Parent=gene-AD08_RS23980;Dbxref=Genbank:WP_000573362.1;Name=WP_000573362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309825.1;locus_tag=AD08_RS23980;product=HK97 gp10 family phage protein;protein_id=WP_000573362.1;transl_table=11 NZ_JHDJ01000023.1 RefSeq gene 647 997 . - . ID=gene-AD08_RS23975;Name=AD08_RS23975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23975;old_locus_tag=AD08_4933 NZ_JHDJ01000023.1 Protein Homology CDS 647 997 . - 0 ID=cds-WP_001007905.1;Parent=gene-AD08_RS23975;Dbxref=Genbank:WP_001007905.1;Name=WP_001007905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309824.1;locus_tag=AD08_RS23975;product=phage head closure protein;protein_id=WP_001007905.1;transl_table=11 NZ_JHDJ01000023.1 RefSeq gene 1007 1333 . - . ID=gene-AD08_RS23970;Name=AD08_RS23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23970;old_locus_tag=AD08_4934 NZ_JHDJ01000023.1 Protein Homology CDS 1007 1333 . - 0 ID=cds-WP_000125990.1;Parent=gene-AD08_RS23970;Dbxref=Genbank:WP_000125990.1;Name=WP_000125990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309823.1;locus_tag=AD08_RS23970;product=phage gp6-like head-tail connector protein;protein_id=WP_000125990.1;transl_table=11 NZ_JHDJ01000023.1 RefSeq pseudogene 1330 2403 . - . ID=gene-AD08_RS27395;Name=AD08_RS27395;end_range=2403,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS27395;old_locus_tag=AD08_4935;partial=true;pseudo=true NZ_JHDJ01000023.1 Protein Homology CDS 1330 2403 . - 0 ID=cds-AD08_RS27395;Parent=gene-AD08_RS27395;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2403,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310002.1;locus_tag=AD08_RS27395;partial=true;product=phage portal protein;pseudo=true;transl_table=11 NZ_JHDJ01000023.1 RefSeq pseudogene 2422 2796 . - . ID=gene-AD08_RS30895;Name=AD08_RS30895;end_range=2796,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30895;partial=true;pseudo=true;start_range=.,2422 NZ_JHDJ01000023.1 Protein Homology CDS 2422 2796 . - 0 ID=cds-AD08_RS30895;Parent=gene-AD08_RS30895;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2796,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000139917.1;locus_tag=AD08_RS30895;partial=true;product=phage portal protein;pseudo=true;start_range=.,2422;transl_table=11 NZ_JHDJ01000023.1 RefSeq pseudogene 2878 3565 . - . ID=gene-AD08_RS27400;Name=AD08_RS27400;end_range=3565,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS27400;partial=true;pseudo=true;start_range=.,2878 NZ_JHDJ01000023.1 Protein Homology CDS 2878 3565 . - 1 ID=cds-AD08_RS27400;Parent=gene-AD08_RS27400;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3565,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310001.1;locus_tag=AD08_RS27400;partial=true;product=phage portal protein;pseudo=true;start_range=.,2878;transl_table=11 ##sequence-region NZ_JHDJ01000024.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000024.1 RefSeq region 1 2047 . + . ID=NZ_JHDJ01000024.1:1..2047;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000024.1 RefSeq gene 169 864 . - . ID=gene-AD08_RS23960;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AD08_RS23960;old_locus_tag=AD08_4937 NZ_JHDJ01000024.1 Protein Homology CDS 169 864 . - 0 ID=cds-WP_000888666.1;Parent=gene-AD08_RS23960;Dbxref=Genbank:WP_000888666.1;Name=WP_000888666.1;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124519.1;locus_tag=AD08_RS23960;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888666.1;transl_table=11 NZ_JHDJ01000024.1 RefSeq pseudogene 1149 2047 . - . ID=gene-AD08_RS23955;Name=AD08_RS23955;end_range=2047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS23955;old_locus_tag=AD08_4938;partial=true;pseudo=true NZ_JHDJ01000024.1 Protein Homology CDS 1149 2047 . - 2 ID=cds-AD08_RS23955;Parent=gene-AD08_RS23955;Note=catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414604.1;locus_tag=AD08_RS23955;partial=true;product=L-arabinose isomerase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000025.1 1 350 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000025.1 RefSeq region 1 350 . + . ID=NZ_JHDJ01000025.1:1..350;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000025.1 RefSeq pseudogene 151 350 . - . ID=gene-AD08_RS27665;Name=AD08_RS27665;end_range=350,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS27665;partial=true;pseudo=true NZ_JHDJ01000025.1 Protein Homology CDS 151 350 . - 0 ID=cds-AD08_RS27665;Parent=gene-AD08_RS27665;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=350,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052651.1;locus_tag=AD08_RS27665;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000026.1 1 316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000026.1 RefSeq region 1 316 . + . ID=NZ_JHDJ01000026.1:1..316;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 ##sequence-region NZ_JHDJ01000027.1 1 5255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000027.1 RefSeq region 1 5255 . + . ID=NZ_JHDJ01000027.1:1..5255;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000027.1 RefSeq pseudogene 1 275 . + . ID=gene-AD08_RS23950;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=pseudogene;locus_tag=AD08_RS23950;old_locus_tag=AD08_4939;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000027.1 Protein Homology CDS 1 275 . + 2 ID=cds-AD08_RS23950;Parent=gene-AD08_RS23950;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=gltX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AD08_RS23950;partial=true;product=glutamate--tRNA ligase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000027.1 RefSeq gene 327 698 . - . ID=gene-AD08_RS23945;Name=AD08_RS23945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23945;old_locus_tag=AD08_4940 NZ_JHDJ01000027.1 Protein Homology CDS 327 698 . - 0 ID=cds-WP_001341599.1;Parent=gene-AD08_RS23945;Dbxref=Genbank:WP_001341599.1;Name=WP_001341599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708261.1;locus_tag=AD08_RS23945;product=putative DNA-binding transcriptional regulator;protein_id=WP_001341599.1;transl_table=11 NZ_JHDJ01000027.1 RefSeq gene 721 1065 . - . ID=gene-AD08_RS23940;Name=AD08_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23940;old_locus_tag=AD08_4941 NZ_JHDJ01000027.1 Protein Homology CDS 721 1065 . - 0 ID=cds-WP_001296278.1;Parent=gene-AD08_RS23940;Dbxref=Genbank:WP_001296278.1;Name=WP_001296278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708260.2;locus_tag=AD08_RS23940;product=putative DNA-binding transcriptional regulator;protein_id=WP_001296278.1;transl_table=11 NZ_JHDJ01000027.1 RefSeq gene 1301 1376 . + . ID=gene-AD08_RS23935;Name=AD08_RS23935;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS23935;old_locus_tag=AD08_4942 NZ_JHDJ01000027.1 tRNAscan-SE tRNA 1301 1376 . + . ID=rna-AD08_RS23935;Parent=gene-AD08_RS23935;anticodon=(pos:1334..1336);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS23935;product=tRNA-Ala NZ_JHDJ01000027.1 tRNAscan-SE exon 1301 1376 . + . ID=exon-AD08_RS23935-1;Parent=rna-AD08_RS23935;anticodon=(pos:1334..1336);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS23935;product=tRNA-Ala NZ_JHDJ01000027.1 RefSeq gene 1416 1491 . + . ID=gene-AD08_RS23930;Name=AD08_RS23930;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS23930;old_locus_tag=AD08_4943 NZ_JHDJ01000027.1 tRNAscan-SE tRNA 1416 1491 . + . ID=rna-AD08_RS23930;Parent=gene-AD08_RS23930;anticodon=(pos:1449..1451);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS23930;product=tRNA-Ala NZ_JHDJ01000027.1 tRNAscan-SE exon 1416 1491 . + . ID=exon-AD08_RS23930-1;Parent=rna-AD08_RS23930;anticodon=(pos:1449..1451);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS23930;product=tRNA-Ala NZ_JHDJ01000027.1 RefSeq gene 1700 3889 . + . ID=gene-AD08_RS23925;Name=AD08_RS23925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23925;old_locus_tag=AD08_4944 NZ_JHDJ01000027.1 Protein Homology CDS 1700 3889 . + 0 ID=cds-WP_001395525.1;Parent=gene-AD08_RS23925;Dbxref=Genbank:WP_001395525.1;Name=WP_001395525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416896.4;locus_tag=AD08_RS23925;product=sensor domain-containing phosphodiesterase;protein_id=WP_001395525.1;transl_table=11 NZ_JHDJ01000027.1 RefSeq gene 3973 5085 . + . ID=gene-AD08_RS23920;Name=AD08_RS23920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23920;old_locus_tag=AD08_4945 NZ_JHDJ01000027.1 Protein Homology CDS 3973 5085 . + 0 ID=cds-WP_001300563.1;Parent=gene-AD08_RS23920;Dbxref=Genbank:WP_001300563.1;Name=WP_001300563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS23920;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 ##sequence-region NZ_JHDJ01000028.1 1 2154 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000028.1 RefSeq region 1 2154 . + . ID=NZ_JHDJ01000028.1:1..2154;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000028.1 RefSeq gene 89 454 . + . ID=gene-AD08_RS23915;Name=AD08_RS23915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23915;old_locus_tag=AD08_4946 NZ_JHDJ01000028.1 GeneMarkS-2+ CDS 89 454 . + 0 ID=cds-WP_000124094.1;Parent=gene-AD08_RS23915;Dbxref=Genbank:WP_000124094.1;Name=WP_000124094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS23915;product=hypothetical protein;protein_id=WP_000124094.1;transl_table=11 NZ_JHDJ01000028.1 RefSeq gene 454 1641 . + . ID=gene-AD08_RS23910;Name=AD08_RS23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23910;old_locus_tag=AD08_4947 NZ_JHDJ01000028.1 Protein Homology CDS 454 1641 . + 0 ID=cds-WP_032217558.1;Parent=gene-AD08_RS23910;Dbxref=Genbank:WP_032217558.1;Name=WP_032217558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013747467.1;locus_tag=AD08_RS23910;product=IS91 family transposase;protein_id=WP_032217558.1;transl_table=11 ##sequence-region NZ_JHDJ01000029.1 1 5008 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000029.1 RefSeq region 1 5008 . + . ID=NZ_JHDJ01000029.1:1..5008;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000029.1 RefSeq gene 290 451 . - . ID=gene-AD08_RS31500;Name=AD08_RS31500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31500;old_locus_tag=AD08_4949 NZ_JHDJ01000029.1 GeneMarkS-2+ CDS 290 451 . - 0 ID=cds-WP_157999325.1;Parent=gene-AD08_RS31500;Dbxref=Genbank:WP_157999325.1;Name=WP_157999325.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS31500;product=hypothetical protein;protein_id=WP_157999325.1;transl_table=11 NZ_JHDJ01000029.1 RefSeq gene 574 1137 . - . ID=gene-AD08_RS23905;Name=AD08_RS23905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23905;old_locus_tag=AD08_4950 NZ_JHDJ01000029.1 Protein Homology CDS 574 1137 . - 0 ID=cds-WP_001462138.1;Parent=gene-AD08_RS23905;Dbxref=Genbank:WP_001462138.1;Name=WP_001462138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052654.1;locus_tag=AD08_RS23905;product=class I SAM-dependent methyltransferase;protein_id=WP_001462138.1;transl_table=11 NZ_JHDJ01000029.1 RefSeq gene 1184 2545 . - . ID=gene-AD08_RS23900;Name=AD08_RS23900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23900;old_locus_tag=AD08_4951 NZ_JHDJ01000029.1 Protein Homology CDS 1184 2545 . - 0 ID=cds-WP_001386125.1;Parent=gene-AD08_RS23900;Dbxref=Genbank:WP_001386125.1;Name=WP_001386125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052653.1;locus_tag=AD08_RS23900;product=DUF3560 domain-containing protein;protein_id=WP_001386125.1;transl_table=11 NZ_JHDJ01000029.1 RefSeq gene 2597 2827 . - . ID=gene-AD08_RS0124455;Name=AD08_RS0124455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124455 NZ_JHDJ01000029.1 Protein Homology CDS 2597 2827 . - 0 ID=cds-WP_000155844.1;Parent=gene-AD08_RS0124455;Dbxref=Genbank:WP_000155844.1;Name=WP_000155844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052652.1;locus_tag=AD08_RS0124455;product=hypothetical protein;protein_id=WP_000155844.1;transl_table=11 NZ_JHDJ01000029.1 RefSeq gene 3869 4060 . - . ID=gene-AD08_RS23895;Name=AD08_RS23895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23895;old_locus_tag=AD08_4952 NZ_JHDJ01000029.1 Protein Homology CDS 3869 4060 . - 0 ID=cds-WP_001027511.1;Parent=gene-AD08_RS23895;Dbxref=Genbank:WP_001027511.1;Name=WP_001027511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238862.1;locus_tag=AD08_RS23895;product=hypothetical protein;protein_id=WP_001027511.1;transl_table=11 NZ_JHDJ01000029.1 RefSeq gene 4057 4479 . - . ID=gene-AD08_RS23890;Name=AD08_RS23890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23890;old_locus_tag=AD08_4953 NZ_JHDJ01000029.1 Protein Homology CDS 4057 4479 . - 0 ID=cds-WP_000271739.1;Parent=gene-AD08_RS23890;Dbxref=Genbank:WP_000271739.1;Name=WP_000271739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052650.1;locus_tag=AD08_RS23890;product=DUF1380 family protein;protein_id=WP_000271739.1;transl_table=11 NZ_JHDJ01000029.1 RefSeq gene 4526 4828 . - . ID=gene-AD08_RS23885;Name=AD08_RS23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23885;old_locus_tag=AD08_4954 NZ_JHDJ01000029.1 Protein Homology CDS 4526 4828 . - 0 ID=cds-WP_072115680.1;Parent=gene-AD08_RS23885;Dbxref=Genbank:WP_072115680.1;Name=WP_072115680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052649.1;locus_tag=AD08_RS23885;product=antirestriction protein;protein_id=WP_072115680.1;transl_table=11 NZ_JHDJ01000029.1 RefSeq pseudogene 4924 5008 . - . ID=gene-AD08_RS30900;Name=AD08_RS30900;end_range=5008,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30900;partial=true;pseudo=true NZ_JHDJ01000029.1 Protein Homology CDS 4924 5008 . - 1 ID=cds-AD08_RS30900;Parent=gene-AD08_RS30900;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5008,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052648.1;locus_tag=AD08_RS30900;partial=true;product=DUF1472 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000030.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000030.1 RefSeq region 1 2047 . + . ID=NZ_JHDJ01000030.1:1..2047;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000030.1 RefSeq gene 1 585 . - . ID=gene-AD08_RS23880;Name=AD08_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23880;old_locus_tag=AD08_4955;partial=true;start_range=.,1 NZ_JHDJ01000030.1 Protein Homology CDS 1 585 . - 0 ID=cds-WP_032217560.1;Parent=gene-AD08_RS23880;Dbxref=Genbank:WP_032217560.1;Name=WP_032217560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414873.1;locus_tag=AD08_RS23880;partial=true;product=carbonic anhydrase CynT;protein_id=WP_032217560.1;start_range=.,1;transl_table=11 NZ_JHDJ01000030.1 RefSeq gene 694 1593 . + . ID=gene-AD08_RS23875;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=AD08_RS23875;old_locus_tag=AD08_4956 NZ_JHDJ01000030.1 Protein Homology CDS 694 1593 . + 0 ID=cds-WP_000952503.1;Parent=gene-AD08_RS23875;Dbxref=Genbank:WP_000952503.1;Name=WP_000952503.1;gbkey=CDS;gene=cynR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414872.3;locus_tag=AD08_RS23875;product=transcriptional regulator CynR;protein_id=WP_000952503.1;transl_table=11 NZ_JHDJ01000030.1 RefSeq gene 1730 2047 . - . ID=gene-AD08_RS23870;Name=AD08_RS23870;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23870;old_locus_tag=AD08_4957;partial=true NZ_JHDJ01000030.1 Protein Homology CDS 1730 2047 . - 0 ID=cds-WP_162752709.1;Parent=gene-AD08_RS23870;Dbxref=Genbank:WP_162752709.1;Name=WP_162752709.1;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414871.1;locus_tag=AD08_RS23870;partial=true;product=amidohydrolase family protein;protein_id=WP_162752709.1;transl_table=11 ##sequence-region NZ_JHDJ01000031.1 1 9163 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000031.1 RefSeq region 1 9163 . + . ID=NZ_JHDJ01000031.1:1..9163;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000031.1 RefSeq gene 1 704 . - . ID=gene-AD08_RS23865;Name=AD08_RS23865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23865;old_locus_tag=AD08_4958;partial=true;start_range=.,1 NZ_JHDJ01000031.1 Protein Homology CDS 1 704 . - 0 ID=cds-WP_032217562.1;Parent=gene-AD08_RS23865;Dbxref=Genbank:WP_032217562.1;Name=WP_032217562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310017.1;locus_tag=AD08_RS23865;partial=true;product=host specificity protein J;protein_id=WP_032217562.1;start_range=.,1;transl_table=11 NZ_JHDJ01000031.1 RefSeq gene 840 1367 . + . ID=gene-AD08_RS23860;Name=AD08_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23860;old_locus_tag=AD08_4959 NZ_JHDJ01000031.1 Protein Homology CDS 840 1367 . + 0 ID=cds-WP_001530016.1;Parent=gene-AD08_RS23860;Dbxref=Genbank:WP_001530016.1;Name=WP_001530016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310016.1;locus_tag=AD08_RS23860;product=superoxide dismutase family protein;protein_id=WP_001530016.1;transl_table=11 NZ_JHDJ01000031.1 RefSeq gene 1608 2240 . - . ID=gene-AD08_RS23855;Name=AD08_RS23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23855;old_locus_tag=AD08_4960 NZ_JHDJ01000031.1 Protein Homology CDS 1608 2240 . - 0 ID=cds-WP_162752699.1;Parent=gene-AD08_RS23855;Dbxref=Genbank:WP_162752699.1;Name=WP_162752699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188718.1;locus_tag=AD08_RS23855;product=tail assembly protein;protein_id=WP_162752699.1;transl_table=11 NZ_JHDJ01000031.1 RefSeq gene 2186 2923 . - . ID=gene-AD08_RS23850;Name=AD08_RS23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23850;old_locus_tag=AD08_4961 NZ_JHDJ01000031.1 Protein Homology CDS 2186 2923 . - 0 ID=cds-WP_032217564.1;Parent=gene-AD08_RS23850;Dbxref=Genbank:WP_032217564.1;Name=WP_032217564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000967278.1;locus_tag=AD08_RS23850;product=phage tail protein;protein_id=WP_032217564.1;transl_table=11 NZ_JHDJ01000031.1 RefSeq gene 2978 3880 . - . ID=gene-AD08_RS23845;Name=AD08_RS23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23845;old_locus_tag=AD08_4962 NZ_JHDJ01000031.1 Protein Homology CDS 2978 3880 . - 0 ID=cds-WP_024219764.1;Parent=gene-AD08_RS23845;Dbxref=Genbank:WP_024219764.1;Name=WP_024219764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001084296.1;locus_tag=AD08_RS23845;product=antirepressor;protein_id=WP_024219764.1;transl_table=11 NZ_JHDJ01000031.1 RefSeq gene 4143 4295 . - . ID=gene-AD08_RS0124460;Name=AD08_RS0124460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124460 NZ_JHDJ01000031.1 Protein Homology CDS 4143 4295 . - 0 ID=cds-WP_000410000.1;Parent=gene-AD08_RS0124460;Dbxref=Genbank:WP_000410000.1;Name=WP_000410000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410001.1;locus_tag=AD08_RS0124460;product=Arc family DNA-binding protein;protein_id=WP_000410000.1;transl_table=11 NZ_JHDJ01000031.1 RefSeq gene 4410 4658 . + . ID=gene-AD08_RS23840;Name=AD08_RS23840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23840;old_locus_tag=AD08_4963 NZ_JHDJ01000031.1 Protein Homology CDS 4410 4658 . + 0 ID=cds-WP_001051912.1;Parent=gene-AD08_RS23840;Dbxref=Genbank:WP_001051912.1;Name=WP_001051912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001051912.1;locus_tag=AD08_RS23840;product=Arc family DNA-binding protein;protein_id=WP_001051912.1;transl_table=11 NZ_JHDJ01000031.1 RefSeq gene 4658 5194 . + . ID=gene-AD08_RS0124465;Name=AD08_RS0124465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124465 NZ_JHDJ01000031.1 Protein Homology CDS 4658 5194 . + 0 ID=cds-WP_000903306.1;Parent=gene-AD08_RS0124465;Dbxref=Genbank:WP_000903306.1;Name=WP_000903306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554902.1;locus_tag=AD08_RS0124465;product=hypothetical protein;protein_id=WP_000903306.1;transl_table=11 NZ_JHDJ01000031.1 RefSeq gene 5251 5949 . - . ID=gene-AD08_RS23835;Name=AD08_RS23835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23835;old_locus_tag=AD08_4965 NZ_JHDJ01000031.1 Protein Homology CDS 5251 5949 . - 0 ID=cds-WP_032217565.1;Parent=gene-AD08_RS23835;Dbxref=Genbank:WP_032217565.1;Name=WP_032217565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309143.1;locus_tag=AD08_RS23835;product=phage minor tail protein L;protein_id=WP_032217565.1;transl_table=11 NZ_JHDJ01000031.1 RefSeq gene 5949 6290 . - . ID=gene-AD08_RS23830;Name=AD08_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23830;old_locus_tag=AD08_4966 NZ_JHDJ01000031.1 Protein Homology CDS 5949 6290 . - 0 ID=cds-WP_000807940.1;Parent=gene-AD08_RS23830;Dbxref=Genbank:WP_000807940.1;Name=WP_000807940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309831.1;locus_tag=AD08_RS23830;product=phage tail protein;protein_id=WP_000807940.1;transl_table=11 NZ_JHDJ01000031.1 RefSeq pseudogene 6283 9163 . - . ID=gene-AD08_RS0124470;Name=AD08_RS0124470;end_range=9163,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0124470;partial=true;pseudo=true NZ_JHDJ01000031.1 Protein Homology CDS 6283 9163 . - 1 ID=cds-AD08_RS0124470;Parent=gene-AD08_RS0124470;Note=internal stop%3B incomplete%3B missing N-terminus;end_range=9163,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310010.1;locus_tag=AD08_RS0124470;partial=true;product=phage tail tape measure protein;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000032.1 1 13528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000032.1 RefSeq region 1 13528 . + . ID=NZ_JHDJ01000032.1:1..13528;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000032.1 RefSeq gene 160 528 . - . ID=gene-AD08_RS27305;Name=AD08_RS27305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS27305 NZ_JHDJ01000032.1 GeneMarkS-2+ CDS 160 528 . - 0 ID=cds-WP_050436496.1;Parent=gene-AD08_RS27305;Dbxref=Genbank:WP_050436496.1;Name=WP_050436496.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS27305;product=hypothetical protein;protein_id=WP_050436496.1;transl_table=11 NZ_JHDJ01000032.1 RefSeq gene 1377 2645 . - . ID=gene-AD08_RS31505;Name=AD08_RS31505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31505;old_locus_tag=AD08_4971 NZ_JHDJ01000032.1 GeneMarkS-2+ CDS 1377 2645 . - 0 ID=cds-WP_064734352.1;Parent=gene-AD08_RS31505;Dbxref=Genbank:WP_064734352.1;Name=WP_064734352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS31505;product=hypothetical protein;protein_id=WP_064734352.1;transl_table=11 NZ_JHDJ01000032.1 RefSeq gene 2638 3270 . - . ID=gene-AD08_RS0124480;Name=AD08_RS0124480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124480 NZ_JHDJ01000032.1 Protein Homology CDS 2638 3270 . - 0 ID=cds-WP_032217566.1;Parent=gene-AD08_RS0124480;Dbxref=Genbank:WP_032217566.1;Name=WP_032217566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575727.1;locus_tag=AD08_RS0124480;product=ATP-binding cassette domain-containing protein;protein_id=WP_032217566.1;transl_table=11 NZ_JHDJ01000032.1 RefSeq gene 3263 4036 . - . ID=gene-AD08_RS23820;Name=AD08_RS23820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23820;old_locus_tag=AD08_4973 NZ_JHDJ01000032.1 GeneMarkS-2+ CDS 3263 4036 . - 0 ID=cds-WP_143370820.1;Parent=gene-AD08_RS23820;Dbxref=Genbank:WP_143370820.1;Name=WP_143370820.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS23820;product=hypothetical protein;protein_id=WP_143370820.1;transl_table=11 NZ_JHDJ01000032.1 RefSeq gene 3999 5207 . - . ID=gene-AD08_RS23815;Name=AD08_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23815;old_locus_tag=AD08_4974 NZ_JHDJ01000032.1 Protein Homology CDS 3999 5207 . - 0 ID=cds-WP_032217567.1;Parent=gene-AD08_RS23815;Dbxref=Genbank:WP_032217567.1;Name=WP_032217567.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014385.1;locus_tag=AD08_RS23815;product=TolC family protein;protein_id=WP_032217567.1;transl_table=11 NZ_JHDJ01000032.1 RefSeq gene 5204 6211 . - . ID=gene-AD08_RS23810;Name=AD08_RS23810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23810;old_locus_tag=AD08_4975 NZ_JHDJ01000032.1 GeneMarkS-2+ CDS 5204 6211 . - 0 ID=cds-WP_050489072.1;Parent=gene-AD08_RS23810;Dbxref=Genbank:WP_050489072.1;Name=WP_050489072.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS23810;product=ABC transporter permease;protein_id=WP_050489072.1;transl_table=11 NZ_JHDJ01000032.1 RefSeq gene 6513 7544 . - . ID=gene-AD08_RS23805;Name=AD08_RS23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23805;old_locus_tag=AD08_4976 NZ_JHDJ01000032.1 Protein Homology CDS 6513 7544 . - 0 ID=cds-WP_032217569.1;Parent=gene-AD08_RS23805;Dbxref=Genbank:WP_032217569.1;Name=WP_032217569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011787828.1;locus_tag=AD08_RS23805;product=IS630 family transposase;protein_id=WP_032217569.1;transl_table=11 NZ_JHDJ01000032.1 RefSeq gene 7818 8984 . + . ID=gene-AD08_RS23800;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=AD08_RS23800;old_locus_tag=AD08_4977 NZ_JHDJ01000032.1 Protein Homology CDS 7818 8984 . + 0 ID=cds-WP_001238646.1;Parent=gene-AD08_RS23800;Dbxref=Genbank:WP_001238646.1;Name=WP_001238646.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052640.1;locus_tag=AD08_RS23800;product=plasmid-partitioning protein SopA;protein_id=WP_001238646.1;transl_table=11 NZ_JHDJ01000032.1 RefSeq gene 8984 9955 . + . ID=gene-AD08_RS23795;Name=AD08_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23795;old_locus_tag=AD08_4978 NZ_JHDJ01000032.1 Protein Homology CDS 8984 9955 . + 0 ID=cds-WP_001575734.1;Parent=gene-AD08_RS23795;Dbxref=Genbank:WP_001575734.1;Name=WP_001575734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817038.1;locus_tag=AD08_RS23795;product=ParB/RepB/Spo0J family plasmid partition protein;protein_id=WP_001575734.1;transl_table=11 NZ_JHDJ01000032.1 RefSeq gene 10312 10461 . + . ID=gene-AD08_RS30910;Name=AD08_RS30910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30910;old_locus_tag=AD08_4979 NZ_JHDJ01000032.1 GeneMarkS-2+ CDS 10312 10461 . + 0 ID=cds-WP_162535354.1;Parent=gene-AD08_RS30910;Dbxref=Genbank:WP_162535354.1;Name=WP_162535354.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS30910;product=hypothetical protein;protein_id=WP_162535354.1;transl_table=11 NZ_JHDJ01000032.1 RefSeq pseudogene 10480 10909 . + . ID=gene-AD08_RS30915;Name=AD08_RS30915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30915;pseudo=true NZ_JHDJ01000032.1 Protein Homology CDS 10480 10909 . + 0 ID=cds-AD08_RS30915;Parent=gene-AD08_RS30915;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672075.1;locus_tag=AD08_RS30915;product=DUF1472 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDJ01000032.1 RefSeq gene 11005 11283 . + . ID=gene-AD08_RS23790;Name=AD08_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23790;old_locus_tag=AD08_4980 NZ_JHDJ01000032.1 Protein Homology CDS 11005 11283 . + 0 ID=cds-WP_139061344.1;Parent=gene-AD08_RS23790;Dbxref=Genbank:WP_139061344.1;Name=WP_139061344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052649.1;locus_tag=AD08_RS23790;product=antirestriction protein;protein_id=WP_139061344.1;transl_table=11 NZ_JHDJ01000032.1 RefSeq gene 11330 11752 . + . ID=gene-AD08_RS23785;Name=AD08_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23785;old_locus_tag=AD08_4981 NZ_JHDJ01000032.1 Protein Homology CDS 11330 11752 . + 0 ID=cds-WP_032217571.1;Parent=gene-AD08_RS23785;Dbxref=Genbank:WP_032217571.1;Name=WP_032217571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052650.1;locus_tag=AD08_RS23785;product=DUF1380 family protein;protein_id=WP_032217571.1;transl_table=11 NZ_JHDJ01000032.1 RefSeq gene 11749 11940 . + . ID=gene-AD08_RS23780;Name=AD08_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23780;old_locus_tag=AD08_4982 NZ_JHDJ01000032.1 Protein Homology CDS 11749 11940 . + 0 ID=cds-WP_032217572.1;Parent=gene-AD08_RS23780;Dbxref=Genbank:WP_032217572.1;Name=WP_032217572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238862.1;locus_tag=AD08_RS23780;product=hypothetical protein;protein_id=WP_032217572.1;transl_table=11 NZ_JHDJ01000032.1 RefSeq gene 12003 12311 . + . ID=gene-AD08_RS27705;Name=AD08_RS27705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS27705 NZ_JHDJ01000032.1 Protein Homology CDS 12003 12311 . + 0 ID=cds-WP_071995798.1;Parent=gene-AD08_RS27705;Dbxref=Genbank:WP_071995798.1;Name=WP_071995798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001347400.1;locus_tag=AD08_RS27705;product=hypothetical protein;protein_id=WP_071995798.1;transl_table=11 NZ_JHDJ01000032.1 RefSeq gene 12646 13080 . + . ID=gene-AD08_RS23775;Name=AD08_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23775;old_locus_tag=AD08_4983 NZ_JHDJ01000032.1 Protein Homology CDS 12646 13080 . + 0 ID=cds-WP_032217573.1;Parent=gene-AD08_RS23775;Dbxref=Genbank:WP_032217573.1;Name=WP_032217573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000218847.1;locus_tag=AD08_RS23775;product=hypothetical protein;protein_id=WP_032217573.1;transl_table=11 NZ_JHDJ01000032.1 RefSeq gene 13174 13377 . + . ID=gene-AD08_RS23770;Name=AD08_RS23770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23770;old_locus_tag=AD08_4984 NZ_JHDJ01000032.1 Protein Homology CDS 13174 13377 . + 0 ID=cds-WP_032181471.1;Parent=gene-AD08_RS23770;Dbxref=Genbank:WP_032181471.1;Name=WP_032181471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001404302.1;locus_tag=AD08_RS23770;product=hypothetical protein;protein_id=WP_032181471.1;transl_table=11 NZ_JHDJ01000032.1 RefSeq pseudogene 13381 13528 . - . ID=gene-AD08_RS30100;Name=AD08_RS30100;end_range=13528,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30100;partial=true;pseudo=true NZ_JHDJ01000032.1 Protein Homology CDS 13381 13528 . - 1 ID=cds-AD08_RS30100;Parent=gene-AD08_RS30100;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=13528,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032488852.1;locus_tag=AD08_RS30100;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000033.1 1 7073 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000033.1 RefSeq region 1 7073 . + . ID=NZ_JHDJ01000033.1:1..7073;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000033.1 RefSeq pseudogene 1 388 . - . ID=gene-AD08_RS27715;Name=AD08_RS27715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS27715;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000033.1 Protein Homology CDS 1 388 . - 0 ID=cds-AD08_RS27715;Parent=gene-AD08_RS27715;Note=frameshifted%3B internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001599377.1;locus_tag=AD08_RS27715;partial=true;product=DUF1472 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000033.1 RefSeq gene 363 1133 . - . ID=gene-AD08_RS30105;Name=AD08_RS30105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30105;old_locus_tag=AD08_4985 NZ_JHDJ01000033.1 Protein Homology CDS 363 1133 . - 0 ID=cds-WP_001006239.1;Parent=gene-AD08_RS30105;Dbxref=Genbank:WP_001006239.1;Name=WP_001006239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001462092.1;locus_tag=AD08_RS30105;product=hypothetical protein;protein_id=WP_001006239.1;transl_table=11 NZ_JHDJ01000033.1 RefSeq gene 1178 1612 . - . ID=gene-AD08_RS23760;Name=AD08_RS23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23760;old_locus_tag=AD08_4986 NZ_JHDJ01000033.1 Protein Homology CDS 1178 1612 . - 0 ID=cds-WP_000274496.1;Parent=gene-AD08_RS23760;Dbxref=Genbank:WP_000274496.1;Name=WP_000274496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562898.1;locus_tag=AD08_RS23760;product=DUF1380 domain-containing protein;protein_id=WP_000274496.1;transl_table=11 NZ_JHDJ01000033.1 RefSeq gene 1626 1847 . - . ID=gene-AD08_RS23755;Name=AD08_RS23755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23755;old_locus_tag=AD08_4987 NZ_JHDJ01000033.1 Protein Homology CDS 1626 1847 . - 0 ID=cds-WP_001104873.1;Parent=gene-AD08_RS23755;Dbxref=Genbank:WP_001104873.1;Name=WP_001104873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958723.1;locus_tag=AD08_RS23755;product=hypothetical protein;protein_id=WP_001104873.1;transl_table=11 NZ_JHDJ01000033.1 RefSeq gene 1848 2531 . - . ID=gene-AD08_RS23750;Name=AD08_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23750;old_locus_tag=AD08_4988 NZ_JHDJ01000033.1 Protein Homology CDS 1848 2531 . - 0 ID=cds-WP_000086115.1;Parent=gene-AD08_RS23750;Dbxref=Genbank:WP_000086115.1;Name=WP_000086115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858331.2;locus_tag=AD08_RS23750;product=DNA methylase;protein_id=WP_000086115.1;transl_table=11 NZ_JHDJ01000033.1 RefSeq gene 2608 2919 . - . ID=gene-AD08_RS30110;Name=AD08_RS30110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30110 NZ_JHDJ01000033.1 Protein Homology CDS 2608 2919 . - 0 ID=cds-WP_032146222.1;Parent=gene-AD08_RS30110;Dbxref=Genbank:WP_032146222.1;Name=WP_032146222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858330.2;locus_tag=AD08_RS30110;product=hypothetical protein;protein_id=WP_032146222.1;transl_table=11 NZ_JHDJ01000033.1 RefSeq gene 2916 3842 . - . ID=gene-AD08_RS23745;Name=AD08_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23745;old_locus_tag=AD08_4990 NZ_JHDJ01000033.1 Protein Homology CDS 2916 3842 . - 0 ID=cds-WP_001134380.1;Parent=gene-AD08_RS23745;Dbxref=Genbank:WP_001134380.1;Name=WP_001134380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001134314.1;locus_tag=AD08_RS23745;product=DUF1281 domain-containing protein;protein_id=WP_001134380.1;transl_table=11 NZ_JHDJ01000033.1 RefSeq gene 4242 4664 . - . ID=gene-AD08_RS23740;Name=AD08_RS23740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23740;old_locus_tag=AD08_4992 NZ_JHDJ01000033.1 Protein Homology CDS 4242 4664 . - 0 ID=cds-WP_000774834.1;Parent=gene-AD08_RS23740;Dbxref=Genbank:WP_000774834.1;Name=WP_000774834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617754.1;locus_tag=AD08_RS23740;product=hypothetical protein;protein_id=WP_000774834.1;transl_table=11 NZ_JHDJ01000033.1 RefSeq gene 4667 5647 . - . ID=gene-AD08_RS23735;Name=AD08_RS23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23735;old_locus_tag=AD08_4993 NZ_JHDJ01000033.1 Protein Homology CDS 4667 5647 . - 0 ID=cds-WP_001218107.1;Parent=gene-AD08_RS23735;Dbxref=Genbank:WP_001218107.1;Name=WP_001218107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396154.1;locus_tag=AD08_RS23735;product=recombinase;protein_id=WP_001218107.1;transl_table=11 NZ_JHDJ01000033.1 RefSeq gene 6250 7073 . - . ID=gene-AD08_RS23730;Name=blaTEM;end_range=7073,.;gbkey=Gene;gene=blaTEM;gene_biotype=protein_coding;locus_tag=AD08_RS23730;old_locus_tag=AD08_4995;partial=true NZ_JHDJ01000033.1 Protein Homology CDS 6250 7073 . - 2 ID=cds-WP_032217577.1;Parent=gene-AD08_RS23730;Dbxref=Genbank:WP_032217577.1;Name=WP_032217577.1;end_range=7073,.;gbkey=CDS;gene=blaTEM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AD08_RS23730;partial=true;product=TEM family class A beta-lactamase;protein_id=WP_032217577.1;transl_table=11 ##sequence-region NZ_JHDJ01000034.1 1 2465 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000034.1 RefSeq region 1 2465 . + . ID=NZ_JHDJ01000034.1:1..2465;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000034.1 RefSeq gene 1 433 . + . ID=gene-AD08_RS23725;Name=AD08_RS23725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23725;old_locus_tag=AD08_4996;partial=true;start_range=.,1 NZ_JHDJ01000034.1 Protein Homology CDS 1 433 . + 1 ID=cds-WP_032217578.1;Parent=gene-AD08_RS23725;Dbxref=Genbank:WP_032217578.1;Name=WP_032217578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS23725;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_032217578.1;start_range=.,1;transl_table=11 NZ_JHDJ01000034.1 RefSeq gene 534 1322 . - . ID=gene-AD08_RS23720;Name=AD08_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23720;old_locus_tag=AD08_4997 NZ_JHDJ01000034.1 Protein Homology CDS 534 1322 . - 0 ID=cds-WP_032217579.1;Parent=gene-AD08_RS23720;Dbxref=Genbank:WP_032217579.1;Name=WP_032217579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000640578.1;locus_tag=AD08_RS23720;product=hypothetical protein;protein_id=WP_032217579.1;transl_table=11 NZ_JHDJ01000034.1 RefSeq pseudogene 1479 1751 . - . ID=gene-AD08_RS31510;Name=AD08_RS31510;end_range=1751,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31510;old_locus_tag=AD08_4998;partial=true;pseudo=true NZ_JHDJ01000034.1 Protein Homology CDS 1479 1751 . - 0 ID=cds-AD08_RS31510;Parent=gene-AD08_RS31510;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1751,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001130996.1;locus_tag=AD08_RS31510;partial=true;product=phage tail tape measure protein;pseudo=true;transl_table=11 NZ_JHDJ01000034.1 RefSeq pseudogene 2081 2465 . + . ID=gene-AD08_RS23715;Name=AD08_RS23715;end_range=2465,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS23715;old_locus_tag=AD08_4999;partial=true;pseudo=true NZ_JHDJ01000034.1 Protein Homology CDS 2081 2465 . + 0 ID=cds-AD08_RS23715;Parent=gene-AD08_RS23715;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=2465,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS23715;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JHDJ01000034.1 cmsearch sequence_feature 2362 2465 . + . ID=id-AD08_RS23715;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;end_range=2465,.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS23715;partial=true ##sequence-region NZ_JHDJ01000035.1 1 1711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000035.1 RefSeq region 1 1711 . + . ID=NZ_JHDJ01000035.1:1..1711;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000035.1 RefSeq pseudogene 1 96 . - . ID=gene-AD08_RS23710;Name=AD08_RS23710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS23710;old_locus_tag=AD08_5000;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000035.1 Protein Homology CDS 1 96 . - 0 ID=cds-AD08_RS23710;Parent=gene-AD08_RS23710;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001306947.1;locus_tag=AD08_RS23710;partial=true;product=RHS repeat protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000035.1 RefSeq gene 96 464 . - . ID=gene-AD08_RS23705;Name=AD08_RS23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23705;old_locus_tag=AD08_5001 NZ_JHDJ01000035.1 Protein Homology CDS 96 464 . - 0 ID=cds-WP_000877768.1;Parent=gene-AD08_RS23705;Dbxref=Genbank:WP_000877768.1;Name=WP_000877768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415031.1;locus_tag=AD08_RS23705;product=immunity protein;protein_id=WP_000877768.1;transl_table=11 NZ_JHDJ01000035.1 RefSeq gene 504 1711 . - . ID=gene-AD08_RS0124505;Name=AD08_RS0124505;end_range=1711,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124505;partial=true NZ_JHDJ01000035.1 Protein Homology CDS 504 1711 . - 2 ID=cds-WP_032228308.1;Parent=gene-AD08_RS0124505;Dbxref=Genbank:WP_032228308.1;Name=WP_032228308.1;end_range=1711,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=AD08_RS0124505;partial=true;product=rhs element protein RhsD;protein_id=WP_032228308.1;transl_table=11 ##sequence-region NZ_JHDJ01000036.1 1 1524 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000036.1 RefSeq region 1 1524 . + . ID=NZ_JHDJ01000036.1:1..1524;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000036.1 RefSeq pseudogene 69 1331 . - . ID=gene-AD08_RS23700;Name=AD08_RS23700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS23700;old_locus_tag=AD08_5003;partial=true;pseudo=true;start_range=.,69 NZ_JHDJ01000036.1 Protein Homology CDS 69 1331 . - 0 ID=cds-AD08_RS23700;Parent=gene-AD08_RS23700;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001298859.1;locus_tag=AD08_RS23700;partial=true;product=IS21-like element ISEc12 family transposase;pseudo=true;start_range=.,69;transl_table=11 ##sequence-region NZ_JHDJ01000037.1 1 4659 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000037.1 RefSeq region 1 4659 . + . ID=NZ_JHDJ01000037.1:1..4659;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000037.1 RefSeq gene 1 201 . - . ID=gene-AD08_RS23695;Name=AD08_RS23695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23695;old_locus_tag=AD08_5004;partial=true;start_range=.,1 NZ_JHDJ01000037.1 Protein Homology CDS 1 201 . - 0 ID=cds-WP_032217583.1;Parent=gene-AD08_RS23695;Dbxref=Genbank:WP_032217583.1;Name=WP_032217583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309556.1;locus_tag=AD08_RS23695;partial=true;product=DUF826 domain-containing protein;protein_id=WP_032217583.1;start_range=.,1;transl_table=11 NZ_JHDJ01000037.1 RefSeq gene 227 421 . - . ID=gene-AD08_RS0124510;Name=AD08_RS0124510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124510 NZ_JHDJ01000037.1 Protein Homology CDS 227 421 . - 0 ID=cds-WP_024235164.1;Parent=gene-AD08_RS0124510;Dbxref=Genbank:WP_024235164.1;Name=WP_024235164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000142785.1;locus_tag=AD08_RS0124510;product=DUF1378 family protein;protein_id=WP_024235164.1;transl_table=11 NZ_JHDJ01000037.1 RefSeq gene 569 2548 . - . ID=gene-AD08_RS23690;Name=AD08_RS23690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23690;old_locus_tag=AD08_5006 NZ_JHDJ01000037.1 Protein Homology CDS 569 2548 . - 0 ID=cds-WP_032217584.1;Parent=gene-AD08_RS23690;Dbxref=Genbank:WP_032217584.1;Name=WP_032217584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232628.1;locus_tag=AD08_RS23690;product=SASA family carbohydrate esterase;protein_id=WP_032217584.1;transl_table=11 NZ_JHDJ01000037.1 RefSeq gene 3520 3596 . - . ID=gene-AD08_RS23685;Name=AD08_RS23685;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS23685;old_locus_tag=AD08_5007 NZ_JHDJ01000037.1 tRNAscan-SE tRNA 3520 3596 . - . ID=rna-AD08_RS23685;Parent=gene-AD08_RS23685;anticodon=(pos:complement(3560..3562));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS23685;product=tRNA-Arg NZ_JHDJ01000037.1 tRNAscan-SE exon 3520 3596 . - . ID=exon-AD08_RS23685-1;Parent=rna-AD08_RS23685;anticodon=(pos:complement(3560..3562));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS23685;product=tRNA-Arg NZ_JHDJ01000037.1 RefSeq gene 3610 3686 . - . ID=gene-AD08_RS23680;Name=AD08_RS23680;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS23680;old_locus_tag=AD08_5008 NZ_JHDJ01000037.1 tRNAscan-SE tRNA 3610 3686 . - . ID=rna-AD08_RS23680;Parent=gene-AD08_RS23680;anticodon=(pos:complement(3650..3652));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS23680;product=tRNA-Arg NZ_JHDJ01000037.1 tRNAscan-SE exon 3610 3686 . - . ID=exon-AD08_RS23680-1;Parent=rna-AD08_RS23680;anticodon=(pos:complement(3650..3652));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS23680;product=tRNA-Arg NZ_JHDJ01000037.1 RefSeq gene 3694 3769 . - . ID=gene-AD08_RS23675;Name=AD08_RS23675;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS23675;old_locus_tag=AD08_5009 NZ_JHDJ01000037.1 tRNAscan-SE tRNA 3694 3769 . - . ID=rna-AD08_RS23675;Parent=gene-AD08_RS23675;anticodon=(pos:complement(3734..3736));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS23675;product=tRNA-Ile NZ_JHDJ01000037.1 tRNAscan-SE exon 3694 3769 . - . ID=exon-AD08_RS23675-1;Parent=rna-AD08_RS23675;anticodon=(pos:complement(3734..3736));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS23675;product=tRNA-Ile NZ_JHDJ01000037.1 RefSeq gene 3810 4659 . - . ID=gene-AD08_RS27755;Name=AD08_RS27755;end_range=4659,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS27755;old_locus_tag=AD08_5010;partial=true NZ_JHDJ01000037.1 Protein Homology CDS 3810 4659 . - 1 ID=cds-WP_032217585.1;Parent=gene-AD08_RS27755;Dbxref=Genbank:WP_032217585.1;Name=WP_032217585.1;end_range=4659,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309807.1;locus_tag=AD08_RS27755;partial=true;product=site-specific DNA-methyltransferase;protein_id=WP_032217585.1;transl_table=11 ##sequence-region NZ_JHDJ01000038.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000038.1 RefSeq region 1 2047 . + . ID=NZ_JHDJ01000038.1:1..2047;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000038.1 RefSeq gene 1 862 . + . ID=gene-AD08_RS23665;Name=AD08_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23665;old_locus_tag=AD08_5011;partial=true;start_range=.,1 NZ_JHDJ01000038.1 Protein Homology CDS 1 862 . + 1 ID=cds-WP_032217586.1;Parent=gene-AD08_RS23665;Dbxref=Genbank:WP_032217586.1;Name=WP_032217586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016151847.1;locus_tag=AD08_RS23665;partial=true;product=flagellar basal body P-ring protein FlgI;protein_id=WP_032217586.1;start_range=.,1;transl_table=11 NZ_JHDJ01000038.1 RefSeq gene 862 1161 . + . ID=gene-AD08_RS23660;Name=AD08_RS23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23660;old_locus_tag=AD08_5012 NZ_JHDJ01000038.1 Protein Homology CDS 862 1161 . + 0 ID=cds-WP_000867284.1;Parent=gene-AD08_RS23660;Dbxref=Genbank:WP_000867284.1;Name=WP_000867284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000867283.1;locus_tag=AD08_RS23660;product=rod-binding protein;protein_id=WP_000867284.1;transl_table=11 NZ_JHDJ01000038.1 RefSeq pseudogene 1465 2047 . + . ID=gene-AD08_RS23655;Name=AD08_RS23655;end_range=2047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS23655;old_locus_tag=AD08_5014;partial=true;pseudo=true NZ_JHDJ01000038.1 Protein Homology CDS 1465 2047 . + 0 ID=cds-AD08_RS23655;Parent=gene-AD08_RS23655;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000367241.1;locus_tag=AD08_RS23655;partial=true;product=flagellar hook-associated protein FlgK;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000039.1 1 25597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000039.1 RefSeq region 1 25597 . + . ID=NZ_JHDJ01000039.1:1..25597;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000039.1 RefSeq gene 1 1335 . - . ID=gene-AD08_RS23650;Name=AD08_RS23650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23650;old_locus_tag=AD08_5015;partial=true;start_range=.,1 NZ_JHDJ01000039.1 Protein Homology CDS 1 1335 . - 0 ID=cds-WP_032171013.1;Parent=gene-AD08_RS23650;Dbxref=Genbank:WP_032171013.1;Name=WP_032171013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AD08_RS23650;partial=true;product=IS4-like element IS4 family transposase;protein_id=WP_032171013.1;start_range=.,1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 1427 1645 . - . ID=gene-AD08_RS27760;Name=ogrK;gbkey=Gene;gene=ogrK;gene_biotype=protein_coding;locus_tag=AD08_RS27760;old_locus_tag=AD08_5016 NZ_JHDJ01000039.1 Protein Homology CDS 1427 1645 . - 0 ID=cds-WP_000468308.1;Parent=gene-AD08_RS27760;Dbxref=Genbank:WP_000468308.1;Name=WP_000468308.1;gbkey=CDS;gene=ogrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416586.1;locus_tag=AD08_RS27760;product=prophage transcriptional regulator OgrK;protein_id=WP_000468308.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 1727 2890 . - . ID=gene-AD08_RS23640;Name=AD08_RS23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23640;old_locus_tag=AD08_5017 NZ_JHDJ01000039.1 Protein Homology CDS 1727 2890 . - 0 ID=cds-WP_032217588.1;Parent=gene-AD08_RS23640;Dbxref=Genbank:WP_032217588.1;Name=WP_032217588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157990.1;locus_tag=AD08_RS23640;product=phage late control D family protein;protein_id=WP_032217588.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 2890 3369 . - . ID=gene-AD08_RS23635;Name=AD08_RS23635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23635;old_locus_tag=AD08_5018 NZ_JHDJ01000039.1 Protein Homology CDS 2890 3369 . - 0 ID=cds-WP_000978916.1;Parent=gene-AD08_RS23635;Dbxref=Genbank:WP_000978916.1;Name=WP_000978916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000978924.1;locus_tag=AD08_RS23635;product=phage tail protein;protein_id=WP_000978916.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 3384 5831 . - . ID=gene-AD08_RS23630;Name=AD08_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23630;old_locus_tag=AD08_5019 NZ_JHDJ01000039.1 Protein Homology CDS 3384 5831 . - 0 ID=cds-WP_032217589.1;Parent=gene-AD08_RS23630;Dbxref=Genbank:WP_032217589.1;Name=WP_032217589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228341.1;locus_tag=AD08_RS23630;product=phage tail tape measure protein;protein_id=WP_032217589.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 5824 5943 . - . ID=gene-AD08_RS23625;Name=AD08_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23625;old_locus_tag=AD08_5020 NZ_JHDJ01000039.1 Protein Homology CDS 5824 5943 . - 0 ID=cds-WP_000785970.1;Parent=gene-AD08_RS23625;Dbxref=Genbank:WP_000785970.1;Name=WP_000785970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001496926.1;locus_tag=AD08_RS23625;product=GpE family phage tail protein;protein_id=WP_000785970.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 5976 6251 . - . ID=gene-AD08_RS23620;Name=AD08_RS23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23620;old_locus_tag=AD08_5021 NZ_JHDJ01000039.1 Protein Homology CDS 5976 6251 . - 0 ID=cds-WP_032217590.1;Parent=gene-AD08_RS23620;Dbxref=Genbank:WP_032217590.1;Name=WP_032217590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001719230.1;locus_tag=AD08_RS23620;product=phage tail assembly protein;protein_id=WP_032217590.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 6308 6826 . - . ID=gene-AD08_RS23615;Name=AD08_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23615;old_locus_tag=AD08_5022 NZ_JHDJ01000039.1 Protein Homology CDS 6308 6826 . - 0 ID=cds-WP_001251408.1;Parent=gene-AD08_RS23615;Dbxref=Genbank:WP_001251408.1;Name=WP_001251408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554312.1;locus_tag=AD08_RS23615;product=phage major tail tube protein;protein_id=WP_001251408.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 6839 8029 . - . ID=gene-AD08_RS23610;Name=AD08_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23610;old_locus_tag=AD08_5023 NZ_JHDJ01000039.1 Protein Homology CDS 6839 8029 . - 0 ID=cds-WP_001286716.1;Parent=gene-AD08_RS23610;Dbxref=Genbank:WP_001286716.1;Name=WP_001286716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001483446.1;locus_tag=AD08_RS23610;product=phage tail sheath protein;protein_id=WP_001286716.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 8430 9209 . + . ID=gene-AD08_RS23605;Name=AD08_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23605;old_locus_tag=AD08_5024 NZ_JHDJ01000039.1 Protein Homology CDS 8430 9209 . + 0 ID=cds-WP_032217591.1;Parent=gene-AD08_RS23605;Dbxref=Genbank:WP_032217591.1;Name=WP_032217591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001680508.1;locus_tag=AD08_RS23605;product=hypothetical protein;protein_id=WP_032217591.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 9361 9888 . - . ID=gene-AD08_RS23600;Name=AD08_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23600;old_locus_tag=AD08_5025 NZ_JHDJ01000039.1 Protein Homology CDS 9361 9888 . - 0 ID=cds-WP_032217592.1;Parent=gene-AD08_RS23600;Dbxref=Genbank:WP_032217592.1;Name=WP_032217592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001762409.1;locus_tag=AD08_RS23600;product=tail fiber assembly protein;protein_id=WP_032217592.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 9892 12186 . - . ID=gene-AD08_RS23595;Name=AD08_RS23595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23595;old_locus_tag=AD08_5026 NZ_JHDJ01000039.1 Protein Homology CDS 9892 12186 . - 0 ID=cds-WP_032217594.1;Parent=gene-AD08_RS23595;Dbxref=Genbank:WP_032217594.1;Name=WP_032217594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001680510.1;locus_tag=AD08_RS23595;product=phage tail protein;protein_id=WP_032217594.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 12197 12727 . - . ID=gene-AD08_RS23590;Name=AD08_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23590;old_locus_tag=AD08_5027 NZ_JHDJ01000039.1 Protein Homology CDS 12197 12727 . - 0 ID=cds-WP_032217595.1;Parent=gene-AD08_RS23590;Dbxref=Genbank:WP_032217595.1;Name=WP_032217595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001285325.1;locus_tag=AD08_RS23590;product=phage tail protein I;protein_id=WP_032217595.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 12720 13628 . - . ID=gene-AD08_RS23585;Name=AD08_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23585;old_locus_tag=AD08_5028 NZ_JHDJ01000039.1 Protein Homology CDS 12720 13628 . - 0 ID=cds-WP_032217597.1;Parent=gene-AD08_RS23585;Dbxref=Genbank:WP_032217597.1;Name=WP_032217597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000246670.1;locus_tag=AD08_RS23585;product=baseplate assembly protein;protein_id=WP_032217597.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 13633 13980 . - . ID=gene-AD08_RS23580;Name=AD08_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23580;old_locus_tag=AD08_5029 NZ_JHDJ01000039.1 Protein Homology CDS 13633 13980 . - 0 ID=cds-WP_000127164.1;Parent=gene-AD08_RS23580;Dbxref=Genbank:WP_000127164.1;Name=WP_000127164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228331.1;locus_tag=AD08_RS23580;product=baseplate assembly protein;protein_id=WP_000127164.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 13977 14612 . - . ID=gene-AD08_RS23575;Name=AD08_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23575;old_locus_tag=AD08_5030 NZ_JHDJ01000039.1 Protein Homology CDS 13977 14612 . - 0 ID=cds-WP_001697715.1;Parent=gene-AD08_RS23575;Dbxref=Genbank:WP_001697715.1;Name=WP_001697715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093708.1;locus_tag=AD08_RS23575;product=phage baseplate assembly protein V;protein_id=WP_001697715.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 14679 15131 . - . ID=gene-AD08_RS23570;Name=AD08_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23570;old_locus_tag=AD08_5031 NZ_JHDJ01000039.1 Protein Homology CDS 14679 15131 . - 0 ID=cds-WP_001001780.1;Parent=gene-AD08_RS23570;Dbxref=Genbank:WP_001001780.1;Name=WP_001001780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001795.1;locus_tag=AD08_RS23570;product=phage virion morphogenesis protein;protein_id=WP_001001780.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 15124 15591 . - . ID=gene-AD08_RS23565;Name=AD08_RS23565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23565;old_locus_tag=AD08_5032 NZ_JHDJ01000039.1 Protein Homology CDS 15124 15591 . - 0 ID=cds-WP_001406878.1;Parent=gene-AD08_RS23565;Dbxref=Genbank:WP_001406878.1;Name=WP_001406878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001406878.1;locus_tag=AD08_RS23565;product=phage tail protein;protein_id=WP_001406878.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 15554 15727 . - . ID=gene-AD08_RS23560;Name=AD08_RS23560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23560;old_locus_tag=AD08_5033 NZ_JHDJ01000039.1 Protein Homology CDS 15554 15727 . - 0 ID=cds-WP_001440152.1;Parent=gene-AD08_RS23560;Dbxref=Genbank:WP_001440152.1;Name=WP_001440152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001300730.1;locus_tag=AD08_RS23560;product=hypothetical protein;protein_id=WP_001440152.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 15699 16124 . - . ID=gene-AD08_RS23555;Name=AD08_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23555;old_locus_tag=AD08_5034 NZ_JHDJ01000039.1 Protein Homology CDS 15699 16124 . - 0 ID=cds-WP_032217599.1;Parent=gene-AD08_RS23555;Dbxref=Genbank:WP_032217599.1;Name=WP_032217599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001585210.1;locus_tag=AD08_RS23555;product=LysB family phage lysis regulatory protein;protein_id=WP_032217599.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 16112 16537 . - . ID=gene-AD08_RS23550;Name=AD08_RS23550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23550;old_locus_tag=AD08_5035 NZ_JHDJ01000039.1 Protein Homology CDS 16112 16537 . - 0 ID=cds-WP_032217601.1;Parent=gene-AD08_RS23550;Dbxref=Genbank:WP_032217601.1;Name=WP_032217601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736575.1;locus_tag=AD08_RS23550;product=protein lysA;protein_id=WP_032217601.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 16552 17049 . - . ID=gene-AD08_RS23545;Name=AD08_RS23545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23545;old_locus_tag=AD08_5036 NZ_JHDJ01000039.1 Protein Homology CDS 16552 17049 . - 0 ID=cds-WP_001144101.1;Parent=gene-AD08_RS23545;Dbxref=Genbank:WP_001144101.1;Name=WP_001144101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235441.1;locus_tag=AD08_RS23545;product=glycoside hydrolase family 104 protein;protein_id=WP_001144101.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 17049 17330 . - . ID=gene-AD08_RS23540;Name=AD08_RS23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23540;old_locus_tag=AD08_5037 NZ_JHDJ01000039.1 Protein Homology CDS 17049 17330 . - 0 ID=cds-WP_000123124.1;Parent=gene-AD08_RS23540;Dbxref=Genbank:WP_000123124.1;Name=WP_000123124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000123124.1;locus_tag=AD08_RS23540;product=holin;protein_id=WP_000123124.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 17334 17537 . - . ID=gene-AD08_RS23535;Name=AD08_RS23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23535;old_locus_tag=AD08_5038 NZ_JHDJ01000039.1 Protein Homology CDS 17334 17537 . - 0 ID=cds-WP_000846409.1;Parent=gene-AD08_RS23535;Dbxref=Genbank:WP_000846409.1;Name=WP_000846409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000846400.1;locus_tag=AD08_RS23535;product=tail protein X;protein_id=WP_000846409.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 17537 18046 . - . ID=gene-AD08_RS23530;Name=AD08_RS23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23530;old_locus_tag=AD08_5039 NZ_JHDJ01000039.1 Protein Homology CDS 17537 18046 . - 0 ID=cds-WP_000988633.1;Parent=gene-AD08_RS23530;Dbxref=Genbank:WP_000988633.1;Name=WP_000988633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228322.1;locus_tag=AD08_RS23530;product=head completion/stabilization protein;protein_id=WP_000988633.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 18145 18888 . - . ID=gene-AD08_RS23525;Name=AD08_RS23525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23525;old_locus_tag=AD08_5040 NZ_JHDJ01000039.1 Protein Homology CDS 18145 18888 . - 0 ID=cds-WP_032217602.1;Parent=gene-AD08_RS23525;Dbxref=Genbank:WP_032217602.1;Name=WP_032217602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540320.1;locus_tag=AD08_RS23525;product=terminase endonuclease subunit;protein_id=WP_032217602.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 18892 19965 . - . ID=gene-AD08_RS23520;Name=AD08_RS23520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23520;old_locus_tag=AD08_5041 NZ_JHDJ01000039.1 Protein Homology CDS 18892 19965 . - 0 ID=cds-WP_032217603.1;Parent=gene-AD08_RS23520;Dbxref=Genbank:WP_032217603.1;Name=WP_032217603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248534.1;locus_tag=AD08_RS23520;product=phage major capsid protein%2C P2 family;protein_id=WP_032217603.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 20024 20878 . - . ID=gene-AD08_RS23515;Name=AD08_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23515;old_locus_tag=AD08_5042 NZ_JHDJ01000039.1 Protein Homology CDS 20024 20878 . - 0 ID=cds-WP_032217604.1;Parent=gene-AD08_RS23515;Dbxref=Genbank:WP_032217604.1;Name=WP_032217604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001074418.1;locus_tag=AD08_RS23515;product=GPO family capsid scaffolding protein;protein_id=WP_032217604.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 21052 22824 . + . ID=gene-AD08_RS23510;Name=AD08_RS23510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23510;old_locus_tag=AD08_5043 NZ_JHDJ01000039.1 Protein Homology CDS 21052 22824 . + 0 ID=cds-WP_000156861.1;Parent=gene-AD08_RS23510;Dbxref=Genbank:WP_000156861.1;Name=WP_000156861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001357052.1;locus_tag=AD08_RS23510;product=terminase ATPase subunit family protein;protein_id=WP_000156861.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 22824 23858 . + . ID=gene-AD08_RS23505;Name=AD08_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23505;old_locus_tag=AD08_5044 NZ_JHDJ01000039.1 Protein Homology CDS 22824 23858 . + 0 ID=cds-WP_001461845.1;Parent=gene-AD08_RS23505;Dbxref=Genbank:WP_001461845.1;Name=WP_001461845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752368.1;locus_tag=AD08_RS23505;product=phage portal protein;protein_id=WP_001461845.1;transl_table=11 NZ_JHDJ01000039.1 RefSeq gene 24203 25549 . - . ID=gene-AD08_RS23500;Name=AD08_RS23500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23500;old_locus_tag=AD08_5045 NZ_JHDJ01000039.1 Protein Homology CDS 24203 25549 . - 0 ID=cds-WP_000483767.1;Parent=gene-AD08_RS23500;Dbxref=Genbank:WP_000483767.1;Name=WP_000483767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AD08_RS23500;product=IS4-like element IS4 family transposase;protein_id=WP_000483767.1;transl_table=11 ##sequence-region NZ_JHDJ01000040.1 1 16420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000040.1 RefSeq region 1 16420 . + . ID=NZ_JHDJ01000040.1:1..16420;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000040.1 RefSeq gene 1 337 . + . ID=gene-AD08_RS23495;Name=AD08_RS23495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23495;old_locus_tag=AD08_5046;partial=true;start_range=.,1 NZ_JHDJ01000040.1 Protein Homology CDS 1 337 . + 1 ID=cds-WP_032217607.1;Parent=gene-AD08_RS23495;Dbxref=Genbank:WP_032217607.1;Name=WP_032217607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS23495;partial=true;product=transposase;protein_id=WP_032217607.1;start_range=.,1;transl_table=11 NZ_JHDJ01000040.1 RefSeq gene 340 1515 . - . ID=gene-AD08_RS23490;Name=AD08_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23490;old_locus_tag=AD08_5047 NZ_JHDJ01000040.1 Protein Homology CDS 340 1515 . - 0 ID=cds-WP_077698990.1;Parent=gene-AD08_RS23490;Dbxref=Genbank:WP_077698990.1;Name=WP_077698990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001695841.1;locus_tag=AD08_RS23490;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_077698990.1;transl_table=11 NZ_JHDJ01000040.1 RefSeq gene 1585 2574 . - . ID=gene-AD08_RS23485;Name=AD08_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23485;old_locus_tag=AD08_5048 NZ_JHDJ01000040.1 Protein Homology CDS 1585 2574 . - 0 ID=cds-WP_000548675.1;Parent=gene-AD08_RS23485;Dbxref=Genbank:WP_000548675.1;Name=WP_000548675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001397210.1;locus_tag=AD08_RS23485;product=arabinose ABC transporter substrate-binding protein AraF;protein_id=WP_000548675.1;transl_table=11 NZ_JHDJ01000040.1 RefSeq gene 3371 3874 . + . ID=gene-AD08_RS23480;Name=AD08_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23480;old_locus_tag=AD08_5049 NZ_JHDJ01000040.1 Protein Homology CDS 3371 3874 . + 0 ID=cds-WP_000179469.1;Parent=gene-AD08_RS23480;Dbxref=Genbank:WP_000179469.1;Name=WP_000179469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310637.1;locus_tag=AD08_RS23480;product=non-heme ferritin-like protein;protein_id=WP_000179469.1;transl_table=11 NZ_JHDJ01000040.1 RefSeq gene 3953 4204 . - . ID=gene-AD08_RS23475;Name=AD08_RS23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23475;old_locus_tag=AD08_5050 NZ_JHDJ01000040.1 Protein Homology CDS 3953 4204 . - 0 ID=cds-WP_000082127.1;Parent=gene-AD08_RS23475;Dbxref=Genbank:WP_000082127.1;Name=WP_000082127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416416.2;locus_tag=AD08_RS23475;product=DUF2766 domain-containing protein;protein_id=WP_000082127.1;transl_table=11 NZ_JHDJ01000040.1 RefSeq gene 4319 4405 . - . ID=gene-AD08_RS30120;Name=azuC;gbkey=Gene;gene=azuC;gene_biotype=protein_coding;locus_tag=AD08_RS30120 NZ_JHDJ01000040.1 Protein Homology CDS 4319 4405 . - 0 ID=cds-WP_010723106.1;Parent=gene-AD08_RS30120;Dbxref=Genbank:WP_010723106.1;Name=WP_010723106.1;gbkey=CDS;gene=azuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791245.1;locus_tag=AD08_RS30120;product=stress response protein AzuC;protein_id=WP_010723106.1;transl_table=11 NZ_JHDJ01000040.1 RefSeq gene 4668 4991 . + . ID=gene-AD08_RS0124520;Name=AD08_RS0124520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124520 NZ_JHDJ01000040.1 Protein Homology CDS 4668 4991 . + 0 ID=cds-WP_001237869.1;Parent=gene-AD08_RS0124520;Dbxref=Genbank:WP_001237869.1;Name=WP_001237869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416417.1;locus_tag=AD08_RS0124520;product=lipoprotein%2C function unknown;protein_id=WP_001237869.1;transl_table=11 NZ_JHDJ01000040.1 RefSeq gene 5162 5659 . + . ID=gene-AD08_RS23470;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=AD08_RS23470;old_locus_tag=AD08_5053 NZ_JHDJ01000040.1 Protein Homology CDS 5162 5659 . + 0 ID=cds-WP_000917208.1;Parent=gene-AD08_RS23470;Dbxref=Genbank:WP_000917208.1;Name=WP_000917208.1;gbkey=CDS;gene=ftnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310640.1;locus_tag=AD08_RS23470;product=non-heme ferritin;protein_id=WP_000917208.1;transl_table=11 NZ_JHDJ01000040.1 RefSeq gene 5697 5936 . - . ID=gene-AD08_RS23465;Name=AD08_RS23465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23465;old_locus_tag=AD08_5054 NZ_JHDJ01000040.1 Protein Homology CDS 5697 5936 . - 0 ID=cds-WP_000377224.1;Parent=gene-AD08_RS23465;Dbxref=Genbank:WP_000377224.1;Name=WP_000377224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310641.1;locus_tag=AD08_RS23465;product=YecH family protein;protein_id=WP_000377224.1;transl_table=11 NZ_JHDJ01000040.1 RefSeq gene 6127 7377 . + . ID=gene-AD08_RS23460;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=AD08_RS23460;old_locus_tag=AD08_5056 NZ_JHDJ01000040.1 Protein Homology CDS 6127 7377 . + 0 ID=cds-WP_024209314.1;Parent=gene-AD08_RS23460;Dbxref=Genbank:WP_024209314.1;Name=WP_024209314.1;gbkey=CDS;gene=tyrP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740480.1;locus_tag=AD08_RS23460;product=tyrosine transporter TyrP;protein_id=WP_024209314.1;transl_table=11 NZ_JHDJ01000040.1 RefSeq gene 7400 8065 . - . ID=gene-AD08_RS23455;Name=yecA;gbkey=Gene;gene=yecA;gene_biotype=protein_coding;locus_tag=AD08_RS23455;old_locus_tag=AD08_5057 NZ_JHDJ01000040.1 Protein Homology CDS 7400 8065 . - 0 ID=cds-WP_000847882.1;Parent=gene-AD08_RS23455;Dbxref=Genbank:WP_000847882.1;Name=WP_000847882.1;gbkey=CDS;gene=yecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310643.1;locus_tag=AD08_RS23455;product=UPF0149 family protein YecA;protein_id=WP_000847882.1;transl_table=11 NZ_JHDJ01000040.1 RefSeq gene 8633 10429 . - . ID=gene-AD08_RS23450;Name=AD08_RS23450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23450;old_locus_tag=AD08_5058 NZ_JHDJ01000040.1 Protein Homology CDS 8633 10429 . - 0 ID=cds-WP_000419016.1;Parent=gene-AD08_RS23450;Dbxref=Genbank:WP_000419016.1;Name=WP_000419016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000419016.1;locus_tag=AD08_RS23450;product=AIPR family protein;protein_id=WP_000419016.1;transl_table=11 NZ_JHDJ01000040.1 RefSeq gene 10416 11444 . - . ID=gene-AD08_RS23445;Name=AD08_RS23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23445;old_locus_tag=AD08_5059 NZ_JHDJ01000040.1 Protein Homology CDS 10416 11444 . - 0 ID=cds-WP_000251941.1;Parent=gene-AD08_RS23445;Dbxref=Genbank:WP_000251941.1;Name=WP_000251941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001688692.1;locus_tag=AD08_RS23445;product=PD-(D/E)XK motif protein;protein_id=WP_000251941.1;transl_table=11 NZ_JHDJ01000040.1 RefSeq gene 11428 14286 . - . ID=gene-AD08_RS23440;Name=AD08_RS23440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23440;old_locus_tag=AD08_5060 NZ_JHDJ01000040.1 Protein Homology CDS 11428 14286 . - 0 ID=cds-WP_032217609.1;Parent=gene-AD08_RS23440;Dbxref=Genbank:WP_032217609.1;Name=WP_032217609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001692844.1;locus_tag=AD08_RS23440;product=Z1 domain-containing protein;protein_id=WP_032217609.1;transl_table=11 NZ_JHDJ01000040.1 RefSeq pseudogene 14283 15182 . - . ID=gene-AD08_RS23435;Name=AD08_RS23435;end_range=15182,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS23435;old_locus_tag=AD08_5061;partial=true;pseudo=true NZ_JHDJ01000040.1 Protein Homology CDS 14283 15182 . - 0 ID=cds-AD08_RS23435;Parent=gene-AD08_RS23435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=15182,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210400.1;locus_tag=AD08_RS23435;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_JHDJ01000040.1 RefSeq gene 15353 16420 . - . ID=gene-AD08_RS23430;Name=AD08_RS23430;end_range=16420,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23430;old_locus_tag=AD08_5062;partial=true NZ_JHDJ01000040.1 Protein Homology CDS 15353 16420 . - 0 ID=cds-WP_032217610.1;Parent=gene-AD08_RS23430;Dbxref=Genbank:WP_032217610.1;Name=WP_032217610.1;end_range=16420,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS23430;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032217610.1;transl_table=11 ##sequence-region NZ_JHDJ01000041.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000041.1 RefSeq region 1 2047 . + . ID=NZ_JHDJ01000041.1:1..2047;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000041.1 RefSeq pseudogene 1 112 . - . ID=gene-AD08_RS23425;Name=AD08_RS23425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS23425;old_locus_tag=AD08_5063;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000041.1 Protein Homology CDS 1 112 . - 0 ID=cds-AD08_RS23425;Parent=gene-AD08_RS23425;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310367.1;locus_tag=AD08_RS23425;partial=true;product=electron transport complex subunit RsxG;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000041.1 RefSeq gene 116 1174 . - . ID=gene-AD08_RS23420;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=AD08_RS23420;old_locus_tag=AD08_5064 NZ_JHDJ01000041.1 Protein Homology CDS 116 1174 . - 0 ID=cds-WP_000231927.1;Parent=gene-AD08_RS23420;Dbxref=Genbank:WP_000231927.1;Name=WP_000231927.1;gbkey=CDS;gene=rsxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416147.1;locus_tag=AD08_RS23420;product=electron transport complex subunit RsxD;protein_id=WP_000231927.1;transl_table=11 NZ_JHDJ01000041.1 RefSeq pseudogene 1175 2047 . - . ID=gene-AD08_RS23415;Name=AD08_RS23415;end_range=2047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS23415;old_locus_tag=AD08_5065;partial=true;pseudo=true NZ_JHDJ01000041.1 Protein Homology CDS 1175 2047 . - 0 ID=cds-AD08_RS23415;Parent=gene-AD08_RS23415;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416146.1;locus_tag=AD08_RS23415;partial=true;product=electron transport complex subunit RsxC;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000042.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000042.1 RefSeq region 1 2047 . + . ID=NZ_JHDJ01000042.1:1..2047;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000042.1 RefSeq gene 154 1305 . + . ID=gene-AD08_RS23410;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=AD08_RS23410;old_locus_tag=AD08_5066 NZ_JHDJ01000042.1 Protein Homology CDS 154 1305 . + 0 ID=cds-WP_001298964.1;Parent=gene-AD08_RS23410;Dbxref=Genbank:WP_001298964.1;Name=WP_001298964.1;gbkey=CDS;gene=argE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122768.1;locus_tag=AD08_RS23410;product=acetylornithine deacetylase;protein_id=WP_001298964.1;transl_table=11 NZ_JHDJ01000042.1 RefSeq pseudogene 1780 2047 . + . ID=gene-AD08_RS23405;Name=AD08_RS23405;end_range=2047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS23405;old_locus_tag=AD08_5067;partial=true;pseudo=true NZ_JHDJ01000042.1 Protein Homology CDS 1780 2047 . + 0 ID=cds-AD08_RS23405;Parent=gene-AD08_RS23405;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312912.1;locus_tag=AD08_RS23405;partial=true;product=phosphoenolpyruvate carboxylase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000043.1 1 1090 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000043.1 RefSeq region 1 1090 . + . ID=NZ_JHDJ01000043.1:1..1090;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000043.1 RefSeq gene 149 1090 . + . ID=gene-AD08_RS0124525;Name=AD08_RS0124525;end_range=1090,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124525;partial=true NZ_JHDJ01000043.1 Protein Homology CDS 149 1090 . + 0 ID=cds-WP_032217621.1;Parent=gene-AD08_RS0124525;Dbxref=Genbank:WP_032217621.1;Name=WP_032217621.1;end_range=1090,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368540.1;locus_tag=AD08_RS0124525;partial=true;product=hypothetical protein;protein_id=WP_032217621.1;transl_table=11 ##sequence-region NZ_JHDJ01000044.1 1 482 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000044.1 RefSeq region 1 482 . + . ID=NZ_JHDJ01000044.1:1..482;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000044.1 RefSeq gene 1 270 . + . ID=gene-AD08_RS23400;Name=AD08_RS23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23400;old_locus_tag=AD08_5069;partial=true;start_range=.,1 NZ_JHDJ01000044.1 Protein Homology CDS 1 270 . + 0 ID=cds-WP_032217623.1;Parent=gene-AD08_RS23400;Dbxref=Genbank:WP_032217623.1;Name=WP_032217623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001824829.1;locus_tag=AD08_RS23400;partial=true;product=DUF4376 domain-containing protein;protein_id=WP_032217623.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDJ01000045.1 1 3810 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000045.1 RefSeq region 1 3810 . + . ID=NZ_JHDJ01000045.1:1..3810;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000045.1 RefSeq gene 171 1283 . - . ID=gene-AD08_RS23395;Name=AD08_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23395;old_locus_tag=AD08_5070 NZ_JHDJ01000045.1 Protein Homology CDS 171 1283 . - 0 ID=cds-WP_001300563.1-2;Parent=gene-AD08_RS23395;Dbxref=Genbank:WP_001300563.1;Name=WP_001300563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS23395;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 NZ_JHDJ01000045.1 RefSeq pseudogene 1344 2093 . - . ID=gene-AD08_RS23390;Name=AD08_RS23390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS23390;old_locus_tag=AD08_5071;partial=true;pseudo=true;start_range=.,1344 NZ_JHDJ01000045.1 Protein Homology CDS 1344 2093 . - 0 ID=cds-AD08_RS23390;Parent=gene-AD08_RS23390;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092420.1;locus_tag=AD08_RS23390;partial=true;product=replication protein;pseudo=true;start_range=.,1344;transl_table=11 NZ_JHDJ01000045.1 RefSeq gene 2090 2389 . - . ID=gene-AD08_RS23385;Name=AD08_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23385;old_locus_tag=AD08_5072 NZ_JHDJ01000045.1 Protein Homology CDS 2090 2389 . - 0 ID=cds-WP_000995577.1;Parent=gene-AD08_RS23385;Dbxref=Genbank:WP_000995577.1;Name=WP_000995577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000995578.1;locus_tag=AD08_RS23385;product=hypothetical protein;protein_id=WP_000995577.1;transl_table=11 NZ_JHDJ01000045.1 RefSeq gene 2386 2610 . - . ID=gene-AD08_RS23380;Name=AD08_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23380;old_locus_tag=AD08_5073 NZ_JHDJ01000045.1 Protein Homology CDS 2386 2610 . - 0 ID=cds-WP_021565276.1;Parent=gene-AD08_RS23380;Dbxref=Genbank:WP_021565276.1;Name=WP_021565276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000620694.1;locus_tag=AD08_RS23380;product=hypothetical protein;protein_id=WP_021565276.1;transl_table=11 NZ_JHDJ01000045.1 RefSeq gene 2607 3755 . - . ID=gene-AD08_RS23375;Name=AD08_RS23375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23375;old_locus_tag=AD08_5074 NZ_JHDJ01000045.1 Protein Homology CDS 2607 3755 . - 0 ID=cds-WP_001530587.1;Parent=gene-AD08_RS23375;Dbxref=Genbank:WP_001530587.1;Name=WP_001530587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087306.1;locus_tag=AD08_RS23375;product=rha family phage regulatory protein;protein_id=WP_001530587.1;transl_table=11 ##sequence-region NZ_JHDJ01000046.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000046.1 RefSeq region 1 2047 . + . ID=NZ_JHDJ01000046.1:1..2047;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000046.1 RefSeq gene 20 95 . - . ID=gene-AD08_RS23370;Name=AD08_RS23370;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS23370;old_locus_tag=AD08_5075 NZ_JHDJ01000046.1 tRNAscan-SE tRNA 20 95 . - . ID=rna-AD08_RS23370;Parent=gene-AD08_RS23370;anticodon=(pos:complement(60..62));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS23370;product=tRNA-Val NZ_JHDJ01000046.1 tRNAscan-SE exon 20 95 . - . ID=exon-AD08_RS23370-1;Parent=rna-AD08_RS23370;anticodon=(pos:complement(60..62));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS23370;product=tRNA-Val NZ_JHDJ01000046.1 RefSeq gene 140 215 . - . ID=gene-AD08_RS23365;Name=AD08_RS23365;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS23365;old_locus_tag=AD08_5076 NZ_JHDJ01000046.1 tRNAscan-SE tRNA 140 215 . - . ID=rna-AD08_RS23365;Parent=gene-AD08_RS23365;anticodon=(pos:complement(180..182));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS23365;product=tRNA-Val NZ_JHDJ01000046.1 tRNAscan-SE exon 140 215 . - . ID=exon-AD08_RS23365-1;Parent=rna-AD08_RS23365;anticodon=(pos:complement(180..182));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS23365;product=tRNA-Val NZ_JHDJ01000046.1 RefSeq gene 474 1889 . + . ID=gene-AD08_RS23360;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AD08_RS23360;old_locus_tag=AD08_5078 NZ_JHDJ01000046.1 Protein Homology CDS 474 1889 . + 0 ID=cds-WP_000695655.1;Parent=gene-AD08_RS23360;Dbxref=Genbank:WP_000695655.1;Name=WP_000695655.1;gbkey=CDS;gene=gltX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AD08_RS23360;product=glutamate--tRNA ligase;protein_id=WP_000695655.1;transl_table=11 NZ_JHDJ01000046.1 RefSeq gene 1941 2047 . - . ID=gene-AD08_RS27785;Name=AD08_RS27785;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS27785;old_locus_tag=AD08_5079;partial=true NZ_JHDJ01000046.1 Protein Homology CDS 1941 2047 . - 2 ID=cds-WP_032205578.1;Parent=gene-AD08_RS27785;Dbxref=Genbank:WP_032205578.1;Name=WP_032205578.1;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=AD08_RS27785;partial=true;product=putative DNA-binding transcriptional regulator;protein_id=WP_032205578.1;transl_table=11 ##sequence-region NZ_JHDJ01000047.1 1 2198 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000047.1 RefSeq region 1 2198 . + . ID=NZ_JHDJ01000047.1:1..2198;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000047.1 RefSeq gene 1 177 . - . ID=gene-AD08_RS27790;Name=AD08_RS27790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS27790;old_locus_tag=AD08_5080;partial=true;start_range=.,1 NZ_JHDJ01000047.1 Protein Homology CDS 1 177 . - 0 ID=cds-WP_113706416.1;Parent=gene-AD08_RS27790;Dbxref=Genbank:WP_113706416.1;Name=WP_113706416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309554.1;locus_tag=AD08_RS27790;partial=true;product=DUF1737 domain-containing protein;protein_id=WP_113706416.1;start_range=.,1;transl_table=11 NZ_JHDJ01000047.1 RefSeq gene 761 958 . - . ID=gene-AD08_RS23355;Name=AD08_RS23355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23355;old_locus_tag=AD08_5082 NZ_JHDJ01000047.1 Protein Homology CDS 761 958 . - 0 ID=cds-WP_016232130.1;Parent=gene-AD08_RS23355;Dbxref=Genbank:WP_016232130.1;Name=WP_016232130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309806.2;locus_tag=AD08_RS23355;product=hypothetical protein;protein_id=WP_016232130.1;transl_table=11 NZ_JHDJ01000047.1 RefSeq gene 1160 1555 . - . ID=gene-AD08_RS23350;Name=AD08_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23350;old_locus_tag=AD08_5083 NZ_JHDJ01000047.1 Protein Homology CDS 1160 1555 . - 0 ID=cds-WP_113706224.1;Parent=gene-AD08_RS23350;Dbxref=Genbank:WP_113706224.1;Name=WP_113706224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461182.1;locus_tag=AD08_RS23350;product=antitermination protein Q;protein_id=WP_113706224.1;transl_table=11 NZ_JHDJ01000047.1 RefSeq gene 1570 2198 . - . ID=gene-AD08_RS23345;Name=AD08_RS23345;end_range=2198,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23345;old_locus_tag=AD08_5084;partial=true NZ_JHDJ01000047.1 Protein Homology CDS 1570 2198 . - 2 ID=cds-WP_032217633.1;Parent=gene-AD08_RS23345;Dbxref=Genbank:WP_032217633.1;Name=WP_032217633.1;end_range=2198,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764249.1;locus_tag=AD08_RS23345;partial=true;product=DUF968 domain-containing protein;protein_id=WP_032217633.1;transl_table=11 ##sequence-region NZ_JHDJ01000048.1 1 325 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000048.1 RefSeq region 1 325 . + . ID=NZ_JHDJ01000048.1:1..325;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 ##sequence-region NZ_JHDJ01000049.1 1 6937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000049.1 RefSeq region 1 6937 . + . ID=NZ_JHDJ01000049.1:1..6937;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000049.1 RefSeq gene 1 756 . - . ID=gene-AD08_RS23340;Name=AD08_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23340;old_locus_tag=AD08_5085;partial=true;start_range=.,1 NZ_JHDJ01000049.1 Protein Homology CDS 1 756 . - 0 ID=cds-WP_032217628.1;Parent=gene-AD08_RS23340;Dbxref=Genbank:WP_032217628.1;Name=WP_032217628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092420.1;locus_tag=AD08_RS23340;partial=true;product=hypothetical protein;protein_id=WP_032217628.1;start_range=.,1;transl_table=11 NZ_JHDJ01000049.1 RefSeq gene 753 1052 . - . ID=gene-AD08_RS23335;Name=AD08_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23335;old_locus_tag=AD08_5086 NZ_JHDJ01000049.1 Protein Homology CDS 753 1052 . - 0 ID=cds-WP_000995577.1-2;Parent=gene-AD08_RS23335;Dbxref=Genbank:WP_000995577.1;Name=WP_000995577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000995578.1;locus_tag=AD08_RS23335;product=hypothetical protein;protein_id=WP_000995577.1;transl_table=11 NZ_JHDJ01000049.1 RefSeq gene 1049 1273 . - . ID=gene-AD08_RS23330;Name=AD08_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23330;old_locus_tag=AD08_5087 NZ_JHDJ01000049.1 Protein Homology CDS 1049 1273 . - 0 ID=cds-WP_021565276.1-2;Parent=gene-AD08_RS23330;Dbxref=Genbank:WP_021565276.1;Name=WP_021565276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000620694.1;locus_tag=AD08_RS23330;product=hypothetical protein;protein_id=WP_021565276.1;transl_table=11 NZ_JHDJ01000049.1 RefSeq gene 1270 2418 . - . ID=gene-AD08_RS23325;Name=AD08_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23325;old_locus_tag=AD08_5088 NZ_JHDJ01000049.1 Protein Homology CDS 1270 2418 . - 0 ID=cds-WP_001530587.1-2;Parent=gene-AD08_RS23325;Dbxref=Genbank:WP_001530587.1;Name=WP_001530587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087306.1;locus_tag=AD08_RS23325;product=rha family phage regulatory protein;protein_id=WP_001530587.1;transl_table=11 NZ_JHDJ01000049.1 RefSeq gene 2415 2972 . - . ID=gene-AD08_RS23320;Name=ymfL;gbkey=Gene;gene=ymfL;gene_biotype=protein_coding;locus_tag=AD08_RS23320;old_locus_tag=AD08_5089 NZ_JHDJ01000049.1 Protein Homology CDS 2415 2972 . - 0 ID=cds-WP_032217639.1;Parent=gene-AD08_RS23320;Dbxref=Genbank:WP_032217639.1;Name=WP_032217639.1;gbkey=CDS;gene=ymfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415665.2;locus_tag=AD08_RS23320;product=protein YmfL;protein_id=WP_032217639.1;transl_table=11 NZ_JHDJ01000049.1 RefSeq gene 2995 3243 . - . ID=gene-AD08_RS0124540;Name=AD08_RS0124540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124540 NZ_JHDJ01000049.1 Protein Homology CDS 2995 3243 . - 0 ID=cds-WP_000187185.1;Parent=gene-AD08_RS0124540;Dbxref=Genbank:WP_000187185.1;Name=WP_000187185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000187185.1;locus_tag=AD08_RS0124540;product=chaperone TorD;protein_id=WP_000187185.1;transl_table=11 NZ_JHDJ01000049.1 RefSeq gene 3379 4065 . + . ID=gene-AD08_RS23315;Name=AD08_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23315;old_locus_tag=AD08_5091 NZ_JHDJ01000049.1 Protein Homology CDS 3379 4065 . + 0 ID=cds-WP_000853320.1;Parent=gene-AD08_RS23315;Dbxref=Genbank:WP_000853320.1;Name=WP_000853320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008323094.1;locus_tag=AD08_RS23315;product=helix-turn-helix transcriptional regulator;protein_id=WP_000853320.1;transl_table=11 NZ_JHDJ01000049.1 RefSeq gene 4048 4938 . - . ID=gene-AD08_RS23310;Name=AD08_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23310;old_locus_tag=AD08_5092 NZ_JHDJ01000049.1 Protein Homology CDS 4048 4938 . - 0 ID=cds-WP_000389078.1;Parent=gene-AD08_RS23310;Dbxref=Genbank:WP_000389078.1;Name=WP_000389078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389078.1;locus_tag=AD08_RS23310;product=hypothetical protein;protein_id=WP_000389078.1;transl_table=11 NZ_JHDJ01000049.1 RefSeq gene 5382 5816 . - . ID=gene-AD08_RS30135;Name=AD08_RS30135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30135;old_locus_tag=AD08_5094 NZ_JHDJ01000049.1 Protein Homology CDS 5382 5816 . - 0 ID=cds-WP_021552253.1;Parent=gene-AD08_RS30135;Dbxref=Genbank:WP_021552253.1;Name=WP_021552253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000016394.1;locus_tag=AD08_RS30135;product=hypothetical protein;protein_id=WP_021552253.1;transl_table=11 NZ_JHDJ01000049.1 RefSeq gene 6288 6650 . + . ID=gene-AD08_RS23300;Name=AD08_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23300;old_locus_tag=AD08_5095 NZ_JHDJ01000049.1 Protein Homology CDS 6288 6650 . + 0 ID=cds-WP_000179185.1;Parent=gene-AD08_RS23300;Dbxref=Genbank:WP_000179185.1;Name=WP_000179185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416860.4;locus_tag=AD08_RS23300;product=hypothetical protein;protein_id=WP_000179185.1;transl_table=11 NZ_JHDJ01000049.1 RefSeq gene 6716 6937 . + . ID=gene-AD08_RS23295;Name=AD08_RS23295;end_range=6937,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23295;old_locus_tag=AD08_5096;partial=true NZ_JHDJ01000049.1 Protein Homology CDS 6716 6937 . + 0 ID=cds-WP_001505268.1;Parent=gene-AD08_RS23295;Dbxref=Genbank:WP_001505268.1;Name=WP_001505268.1;end_range=6937,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416861.1;locus_tag=AD08_RS23295;partial=true;product=DUF2303 family protein;protein_id=WP_001505268.1;transl_table=11 ##sequence-region NZ_JHDJ01000050.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000050.1 RefSeq region 1 2047 . + . ID=NZ_JHDJ01000050.1:1..2047;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000050.1 RefSeq gene 1 682 . + . ID=gene-AD08_RS23290;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=AD08_RS23290;old_locus_tag=AD08_5097;partial=true;start_range=.,1 NZ_JHDJ01000050.1 Protein Homology CDS 1 682 . + 1 ID=cds-WP_000295840.1;Parent=gene-AD08_RS23290;Dbxref=Genbank:WP_000295840.1;Name=WP_000295840.1;gbkey=CDS;gene=fdxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415992.1;locus_tag=AD08_RS23290;partial=true;product=formate dehydrogenase N subunit beta;protein_id=WP_000295840.1;start_range=.,1;transl_table=11 NZ_JHDJ01000050.1 RefSeq gene 675 1328 . + . ID=gene-AD08_RS23285;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=AD08_RS23285;old_locus_tag=AD08_5098 NZ_JHDJ01000050.1 Protein Homology CDS 675 1328 . + 0 ID=cds-WP_000045648.1;Parent=gene-AD08_RS23285;Dbxref=Genbank:WP_000045648.1;Name=WP_000045648.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310107.1;locus_tag=AD08_RS23285;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045648.1;transl_table=11 NZ_JHDJ01000050.1 RefSeq gene 1557 1841 . - . ID=gene-AD08_RS23280;Name=AD08_RS23280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23280;old_locus_tag=AD08_5099 NZ_JHDJ01000050.1 Protein Homology CDS 1557 1841 . - 0 ID=cds-WP_000781370.1;Parent=gene-AD08_RS23280;Dbxref=Genbank:WP_000781370.1;Name=WP_000781370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415994.4;locus_tag=AD08_RS23280;product=HigA family addiction module antidote protein;protein_id=WP_000781370.1;transl_table=11 ##sequence-region NZ_JHDJ01000051.1 1 6456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000051.1 RefSeq region 1 6456 . + . ID=NZ_JHDJ01000051.1:1..6456;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000051.1 RefSeq gene 1 980 . - . ID=gene-AD08_RS23275;Name=AD08_RS23275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23275;old_locus_tag=AD08_5100;partial=true;start_range=.,1 NZ_JHDJ01000051.1 Protein Homology CDS 1 980 . - 0 ID=cds-WP_032217646.1;Parent=gene-AD08_RS23275;Dbxref=Genbank:WP_032217646.1;Name=WP_032217646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000218373.1;locus_tag=AD08_RS23275;partial=true;product=tail fiber protein;protein_id=WP_032217646.1;start_range=.,1;transl_table=11 NZ_JHDJ01000051.1 RefSeq gene 1131 1730 . - . ID=gene-AD08_RS23270;Name=AD08_RS23270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23270;old_locus_tag=AD08_5102 NZ_JHDJ01000051.1 Protein Homology CDS 1131 1730 . - 0 ID=cds-WP_032217644.1;Parent=gene-AD08_RS23270;Dbxref=Genbank:WP_032217644.1;Name=WP_032217644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308870.1;locus_tag=AD08_RS23270;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_032217644.1;transl_table=11 NZ_JHDJ01000051.1 RefSeq gene 1798 5271 . - . ID=gene-AD08_RS23265;Name=AD08_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23265;old_locus_tag=AD08_5103 NZ_JHDJ01000051.1 Protein Homology CDS 1798 5271 . - 0 ID=cds-WP_032217645.1;Parent=gene-AD08_RS23265;Dbxref=Genbank:WP_032217645.1;Name=WP_032217645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309148.1;locus_tag=AD08_RS23265;product=host specificity protein J;protein_id=WP_032217645.1;transl_table=11 NZ_JHDJ01000051.1 RefSeq gene 5615 6247 . - . ID=gene-AD08_RS23260;Name=AD08_RS23260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23260;old_locus_tag=AD08_5104 NZ_JHDJ01000051.1 Protein Homology CDS 5615 6247 . - 0 ID=cds-WP_061089814.1;Parent=gene-AD08_RS23260;Dbxref=Genbank:WP_061089814.1;Name=WP_061089814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188718.1;locus_tag=AD08_RS23260;product=tail assembly protein;protein_id=WP_061089814.1;transl_table=11 NZ_JHDJ01000051.1 RefSeq gene 6193 6456 . - . ID=gene-AD08_RS27820;Name=AD08_RS27820;end_range=6456,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS27820;partial=true NZ_JHDJ01000051.1 Protein Homology CDS 6193 6456 . - 0 ID=cds-WP_032218520.1;Parent=gene-AD08_RS27820;Dbxref=Genbank:WP_032218520.1;Name=WP_032218520.1;end_range=6456,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310013.1;locus_tag=AD08_RS27820;partial=true;product=tail protein;protein_id=WP_032218520.1;transl_table=11 ##sequence-region NZ_JHDJ01000052.1 1 1890 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000052.1 RefSeq region 1 1890 . + . ID=NZ_JHDJ01000052.1:1..1890;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000052.1 RefSeq gene 171 1283 . - . ID=gene-AD08_RS23255;Name=AD08_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23255;old_locus_tag=AD08_5106 NZ_JHDJ01000052.1 Protein Homology CDS 171 1283 . - 0 ID=cds-WP_001300563.1-3;Parent=gene-AD08_RS23255;Dbxref=Genbank:WP_001300563.1;Name=WP_001300563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS23255;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 NZ_JHDJ01000052.1 RefSeq gene 1656 1890 . + . ID=gene-AD08_RS27830;Name=AD08_RS27830;end_range=1890,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS27830;partial=true NZ_JHDJ01000052.1 Protein Homology CDS 1656 1890 . + 0 ID=cds-WP_032254574.1;Parent=gene-AD08_RS27830;Dbxref=Genbank:WP_032254574.1;Name=WP_032254574.1;end_range=1890,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001298859.1;locus_tag=AD08_RS27830;partial=true;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_032254574.1;transl_table=11 ##sequence-region NZ_JHDJ01000053.1 1 4878 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000053.1 RefSeq region 1 4878 . + . ID=NZ_JHDJ01000053.1:1..4878;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000053.1 RefSeq gene 171 1283 . - . ID=gene-AD08_RS23250;Name=AD08_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23250;old_locus_tag=AD08_5107 NZ_JHDJ01000053.1 Protein Homology CDS 171 1283 . - 0 ID=cds-WP_001300563.1-4;Parent=gene-AD08_RS23250;Dbxref=Genbank:WP_001300563.1;Name=WP_001300563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS23250;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 NZ_JHDJ01000053.1 RefSeq gene 1361 1570 . - . ID=gene-AD08_RS0124555;Name=mokC;gbkey=Gene;gene=mokC;gene_biotype=protein_coding;locus_tag=AD08_RS0124555 NZ_JHDJ01000053.1 Protein Homology CDS 1361 1570 . - 0 ID=cds-WP_000935262.1;Parent=gene-AD08_RS0124555;Dbxref=Genbank:WP_000935262.1;Name=WP_000935262.1;gbkey=CDS;gene=mokC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414559.1;locus_tag=AD08_RS0124555;product=type I toxin-antitoxin system toxin MokC;protein_id=WP_000935262.1;transl_table=11 NZ_JHDJ01000053.1 RefSeq gene 2099 3265 . + . ID=gene-AD08_RS23245;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=AD08_RS23245;old_locus_tag=AD08_5108 NZ_JHDJ01000053.1 Protein Homology CDS 2099 3265 . + 0 ID=cds-WP_032217649.1;Parent=gene-AD08_RS23245;Dbxref=Genbank:WP_032217649.1;Name=WP_032217649.1;gbkey=CDS;gene=nhaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414560.1;locus_tag=AD08_RS23245;product=Na+/H+ antiporter NhaA;protein_id=WP_032217649.1;transl_table=11 NZ_JHDJ01000053.1 RefSeq gene 3331 4230 . + . ID=gene-AD08_RS23240;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=AD08_RS23240;old_locus_tag=AD08_5109 NZ_JHDJ01000053.1 Protein Homology CDS 3331 4230 . + 0 ID=cds-WP_001338226.1;Parent=gene-AD08_RS23240;Dbxref=Genbank:WP_001338226.1;Name=WP_001338226.1;gbkey=CDS;gene=nhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705976.2;locus_tag=AD08_RS23240;product=transcriptional activator NhaR;protein_id=WP_001338226.1;transl_table=11 NZ_JHDJ01000053.1 RefSeq gene 4403 4777 . - . ID=gene-AD08_RS23235;Name=AD08_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23235;old_locus_tag=AD08_5110 NZ_JHDJ01000053.1 Protein Homology CDS 4403 4777 . - 0 ID=cds-WP_077698993.1;Parent=gene-AD08_RS23235;Dbxref=Genbank:WP_077698993.1;Name=WP_077698993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS23235;product=hypothetical protein;protein_id=WP_077698993.1;transl_table=11 NZ_JHDJ01000053.1 RefSeq pseudogene 4743 4878 . - . ID=gene-AD08_RS30155;Name=AD08_RS30155;end_range=4878,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30155;old_locus_tag=AD08_5111;partial=true;pseudo=true NZ_JHDJ01000053.1 Protein Homology CDS 4743 4878 . - 1 ID=cds-AD08_RS30155;Parent=gene-AD08_RS30155;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4878,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS30155;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000054.1 1 53046 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000054.1 RefSeq region 1 53046 . + . ID=NZ_JHDJ01000054.1:1..53046;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000054.1 RefSeq gene 297 1157 . + . ID=gene-AD08_RS23225;Name=AD08_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23225;old_locus_tag=AD08_5112 NZ_JHDJ01000054.1 Protein Homology CDS 297 1157 . + 0 ID=cds-WP_000027057.1;Parent=gene-AD08_RS23225;Dbxref=Genbank:WP_000027057.1;Name=WP_000027057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AD08_RS23225;product=class A broad-spectrum beta-lactamase TEM-1;protein_id=WP_000027057.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 1344 1673 . + . ID=gene-AD08_RS23220;Name=AD08_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23220;old_locus_tag=AD08_5113 NZ_JHDJ01000054.1 Protein Homology CDS 1344 1673 . + 0 ID=cds-WP_001415369.1;Parent=gene-AD08_RS23220;Dbxref=Genbank:WP_001415369.1;Name=WP_001415369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001415369.1;locus_tag=AD08_RS23220;product=hypothetical protein;protein_id=WP_001415369.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 1908 2129 . - . ID=gene-AD08_RS0124560;Name=AD08_RS0124560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124560 NZ_JHDJ01000054.1 GeneMarkS-2+ CDS 1908 2129 . - 0 ID=cds-WP_001251694.1;Parent=gene-AD08_RS0124560;Dbxref=Genbank:WP_001251694.1;Name=WP_001251694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS0124560;product=hypothetical protein;protein_id=WP_001251694.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 2120 2323 . - . ID=gene-AD08_RS0124565;Name=AD08_RS0124565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124565 NZ_JHDJ01000054.1 Protein Homology CDS 2120 2323 . - 0 ID=cds-WP_000131876.1;Parent=gene-AD08_RS0124565;Dbxref=Genbank:WP_000131876.1;Name=WP_000131876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000131876.1;locus_tag=AD08_RS0124565;product=hypothetical protein;protein_id=WP_000131876.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq pseudogene 2559 2636 . - . ID=gene-AD08_RS27845;Name=AD08_RS27845;end_range=2636,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS27845;partial=true;pseudo=true NZ_JHDJ01000054.1 Protein Homology CDS 2559 2636 . - 0 ID=cds-AD08_RS27845;Parent=gene-AD08_RS27845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2636,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013221335.1;locus_tag=AD08_RS27845;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 2660 3475 . + . ID=gene-AD08_RS23215;Name=sul2;gbkey=Gene;gene=sul2;gene_biotype=protein_coding;locus_tag=AD08_RS23215;old_locus_tag=AD08_5115 NZ_JHDJ01000054.1 Protein Homology CDS 2660 3475 . + 0 ID=cds-WP_001043260.1;Parent=gene-AD08_RS23215;Dbxref=Genbank:WP_001043260.1;Name=WP_001043260.1;gbkey=CDS;gene=sul2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043260.1;locus_tag=AD08_RS23215;product=sulfonamide-resistant dihydropteroate synthase Sul2;protein_id=WP_001043260.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 3536 4339 . + . ID=gene-AD08_RS23210;Name=aph(3'')-Ib;gbkey=Gene;gene=aph(3'')-Ib;gene_biotype=protein_coding;locus_tag=AD08_RS23210;old_locus_tag=AD08_5116 NZ_JHDJ01000054.1 Protein Homology CDS 3536 4339 . + 0 ID=cds-WP_001082319.1;Parent=gene-AD08_RS23210;Dbxref=Genbank:WP_001082319.1;Name=WP_001082319.1;gbkey=CDS;gene=aph(3'')-Ib;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010890156.1;locus_tag=AD08_RS23210;product=aminoglycoside O-phosphotransferase APH(3'')-Ib;protein_id=WP_001082319.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 4339 5175 . + . ID=gene-AD08_RS0124570;Name=AD08_RS0124570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124570 NZ_JHDJ01000054.1 Protein Homology CDS 4339 5175 . + 0 ID=cds-WP_000480972.1;Parent=gene-AD08_RS0124570;Dbxref=Genbank:WP_000480972.1;Name=WP_000480972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000480972.1;locus_tag=AD08_RS0124570;product=aminoglycoside O-phosphotransferase APH(6)-Id;protein_id=WP_000480972.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 5147 5686 . - . ID=gene-AD08_RS0124575;Name=AD08_RS0124575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124575 NZ_JHDJ01000054.1 Protein Homology CDS 5147 5686 . - 0 ID=cds-WP_001120891.1;Parent=gene-AD08_RS0124575;Dbxref=Genbank:WP_001120891.1;Name=WP_001120891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001120888.1;locus_tag=AD08_RS0124575;product=IS91 family transposase;protein_id=WP_001120891.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 5798 6178 . - . ID=gene-AD08_RS0124580;Name=AD08_RS0124580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124580 NZ_JHDJ01000054.1 Protein Homology CDS 5798 6178 . - 0 ID=cds-WP_001696636.1;Parent=gene-AD08_RS0124580;Dbxref=Genbank:WP_001696636.1;Name=WP_001696636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185524.1;locus_tag=AD08_RS0124580;product=HTH domain-containing protein;protein_id=WP_001696636.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 6369 6686 . + . ID=gene-AD08_RS27855;Name=AD08_RS27855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS27855 NZ_JHDJ01000054.1 Protein Homology CDS 6369 6686 . + 0 ID=cds-WP_113706183.1;Parent=gene-AD08_RS27855;Dbxref=Genbank:WP_113706183.1;Name=WP_113706183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001496645.1;locus_tag=AD08_RS27855;product=DUF4158 domain-containing protein;protein_id=WP_113706183.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 6652 7416 . + . ID=gene-AD08_RS0124590;Name=AD08_RS0124590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124590 NZ_JHDJ01000054.1 Protein Homology CDS 6652 7416 . + 0 ID=cds-WP_001389365.1;Parent=gene-AD08_RS0124590;Dbxref=Genbank:WP_001389365.1;Name=WP_001389365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002008502.1;locus_tag=AD08_RS0124590;product=IS6-like element IS6100 family transposase;protein_id=WP_001389365.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 7909 8493 . - . ID=gene-AD08_RS23205;Name=AD08_RS23205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23205;old_locus_tag=AD08_5120 NZ_JHDJ01000054.1 Protein Homology CDS 7909 8493 . - 0 ID=cds-WP_001137892.1;Parent=gene-AD08_RS23205;Dbxref=Genbank:WP_001137892.1;Name=WP_001137892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137892.1;locus_tag=AD08_RS23205;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001137892.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 8493 9731 . - . ID=gene-AD08_RS23200;Name=AD08_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23200;old_locus_tag=AD08_5121 NZ_JHDJ01000054.1 Protein Homology CDS 8493 9731 . - 0 ID=cds-WP_000004159.1;Parent=gene-AD08_RS23200;Dbxref=Genbank:WP_000004159.1;Name=WP_000004159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004160.1;locus_tag=AD08_RS23200;product=MFS transporter;protein_id=WP_000004159.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 9728 10633 . - . ID=gene-AD08_RS0124600;Name=mph(A);gbkey=Gene;gene=mph(A);gene_biotype=protein_coding;locus_tag=AD08_RS0124600 NZ_JHDJ01000054.1 Protein Homology CDS 9728 10633 . - 0 ID=cds-WP_001404365.1;Parent=gene-AD08_RS0124600;Dbxref=Genbank:WP_001404365.1;Name=WP_001404365.1;gbkey=CDS;gene=mph(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219391.1;locus_tag=AD08_RS0124600;product=Mph(A) family macrolide 2'-phosphotransferase;protein_id=WP_001404365.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq pseudogene 10698 11219 . - . ID=gene-AD08_RS23195;Name=AD08_RS23195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS23195;old_locus_tag=AD08_5123;partial=true;pseudo=true;start_range=.,10698 NZ_JHDJ01000054.1 Protein Homology CDS 10698 11219 . - 0 ID=cds-AD08_RS23195;Parent=gene-AD08_RS23195;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000151478.1;locus_tag=AD08_RS23195;partial=true;product=hypothetical protein;pseudo=true;start_range=.,10698;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 11267 11431 . - . ID=gene-AD08_RS30940;Name=AD08_RS30940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30940;old_locus_tag=AD08_5124 NZ_JHDJ01000054.1 Protein Homology CDS 11267 11431 . - 0 ID=cds-WP_001388374.1;Parent=gene-AD08_RS30940;Dbxref=Genbank:WP_001388374.1;Name=WP_001388374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001388374.1;locus_tag=AD08_RS30940;product=hypothetical protein;protein_id=WP_001388374.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 11428 11697 . - . ID=gene-AD08_RS23190;Name=AD08_RS23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23190;old_locus_tag=AD08_5125 NZ_JHDJ01000054.1 Protein Homology CDS 11428 11697 . - 0 ID=cds-WP_000079939.1;Parent=gene-AD08_RS23190;Dbxref=Genbank:WP_000079939.1;Name=WP_000079939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079945.1;locus_tag=AD08_RS23190;product=hypothetical protein;protein_id=WP_000079939.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 11770 11910 . - . ID=gene-AD08_RS31515;Name=AD08_RS31515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31515 NZ_JHDJ01000054.1 Protein Homology CDS 11770 11910 . - 0 ID=cds-WP_001388372.1;Parent=gene-AD08_RS31515;Dbxref=Genbank:WP_001388372.1;Name=WP_001388372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858394.1;locus_tag=AD08_RS31515;product=hypothetical protein;protein_id=WP_001388372.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 12613 13470 . - . ID=gene-AD08_RS23185;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AD08_RS23185;old_locus_tag=AD08_5126 NZ_JHDJ01000054.1 Protein Homology CDS 12613 13470 . - 0 ID=cds-WP_001696637.1;Parent=gene-AD08_RS23185;Dbxref=Genbank:WP_001696637.1;Name=WP_001696637.1;gbkey=CDS;gene=repA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AD08_RS23185;product=incFII family plasmid replication initiator RepA;protein_id=WP_001696637.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 13463 13537 . - . ID=gene-AD08_RS0124605;Name=AD08_RS0124605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124605 NZ_JHDJ01000054.1 Protein Homology CDS 13463 13537 . - 0 ID=cds-WP_001365705.1;Parent=gene-AD08_RS0124605;Dbxref=Genbank:WP_001365705.1;Name=WP_001365705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858392.1;locus_tag=AD08_RS0124605;product=RepA leader peptide Tap;protein_id=WP_001365705.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 13782 14030 . - . ID=gene-AD08_RS23180;Name=AD08_RS23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23180;old_locus_tag=AD08_5127 NZ_JHDJ01000054.1 Protein Homology CDS 13782 14030 . - 0 ID=cds-WP_000083839.1;Parent=gene-AD08_RS23180;Dbxref=Genbank:WP_000083839.1;Name=WP_000083839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083832.1;locus_tag=AD08_RS23180;product=replication regulatory protein RepA;protein_id=WP_000083839.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 14270 14860 . - . ID=gene-AD08_RS23175;Name=AD08_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23175;old_locus_tag=AD08_5128 NZ_JHDJ01000054.1 Protein Homology CDS 14270 14860 . - 0 ID=cds-WP_000766807.1;Parent=gene-AD08_RS23175;Dbxref=Genbank:WP_000766807.1;Name=WP_000766807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858390.1;locus_tag=AD08_RS23175;product=DUF2726 domain-containing protein;protein_id=WP_000766807.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 14898 15107 . - . ID=gene-AD08_RS23170;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AD08_RS23170;old_locus_tag=AD08_5129 NZ_JHDJ01000054.1 Protein Homology CDS 14898 15107 . - 0 ID=cds-WP_001333231.1;Parent=gene-AD08_RS23170;Dbxref=Genbank:WP_001333231.1;Name=WP_001333231.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958726.1;locus_tag=AD08_RS23170;product=hemolysin expression modulator Hha;protein_id=WP_001333231.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 15153 15614 . - . ID=gene-AD08_RS23165;Name=AD08_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23165;old_locus_tag=AD08_5130 NZ_JHDJ01000054.1 Protein Homology CDS 15153 15614 . - 0 ID=cds-WP_000978819.1;Parent=gene-AD08_RS23165;Dbxref=Genbank:WP_000978819.1;Name=WP_000978819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052672.1;locus_tag=AD08_RS23165;product=thermonuclease family protein;protein_id=WP_000978819.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 15858 16049 . - . ID=gene-AD08_RS23160;Name=AD08_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23160;old_locus_tag=AD08_5131 NZ_JHDJ01000054.1 Protein Homology CDS 15858 16049 . - 0 ID=cds-WP_071528006.1;Parent=gene-AD08_RS23160;Dbxref=Genbank:WP_071528006.1;Name=WP_071528006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858385.1;locus_tag=AD08_RS23160;product=hypothetical protein;protein_id=WP_071528006.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 16715 17392 . - . ID=gene-AD08_RS23155;Name=AD08_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23155;old_locus_tag=AD08_5133 NZ_JHDJ01000054.1 Protein Homology CDS 16715 17392 . - 0 ID=cds-WP_001696638.1;Parent=gene-AD08_RS23155;Dbxref=Genbank:WP_001696638.1;Name=WP_001696638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001722975.1;locus_tag=AD08_RS23155;product=hypothetical protein;protein_id=WP_001696638.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 17679 17891 . - . ID=gene-AD08_RS23150;Name=AD08_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23150;old_locus_tag=AD08_5134 NZ_JHDJ01000054.1 Protein Homology CDS 17679 17891 . - 0 ID=cds-WP_001301409.1;Parent=gene-AD08_RS23150;Dbxref=Genbank:WP_001301409.1;Name=WP_001301409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858385.1;locus_tag=AD08_RS23150;product=ANR family transcriptional regulator;protein_id=WP_001301409.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 18010 18570 . - . ID=gene-AD08_RS23145;Name=AD08_RS23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23145;old_locus_tag=AD08_5135 NZ_JHDJ01000054.1 Protein Homology CDS 18010 18570 . - 0 ID=cds-WP_001696641.1;Parent=gene-AD08_RS23145;Dbxref=Genbank:WP_001696641.1;Name=WP_001696641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052671.1;locus_tag=AD08_RS23145;product=fertility inhibition protein FinO;protein_id=WP_001696641.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 18625 19371 . - . ID=gene-AD08_RS23140;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=AD08_RS23140;old_locus_tag=AD08_5136 NZ_JHDJ01000054.1 Protein Homology CDS 18625 19371 . - 0 ID=cds-WP_000205736.1;Parent=gene-AD08_RS23140;Dbxref=Genbank:WP_000205736.1;Name=WP_000205736.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052669.1;locus_tag=AD08_RS23140;product=type-F conjugative transfer system pilin acetylase TraX;protein_id=WP_000205736.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 19391 24661 . - . ID=gene-AD08_RS23135;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=AD08_RS23135;old_locus_tag=AD08_5137 NZ_JHDJ01000054.1 Protein Homology CDS 19391 24661 . - 0 ID=cds-WP_032217653.1;Parent=gene-AD08_RS23135;Dbxref=Genbank:WP_032217653.1;Name=WP_032217653.1;gbkey=CDS;gene=traI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001463032.1;locus_tag=AD08_RS23135;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_032217653.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 24661 26904 . - . ID=gene-AD08_RS23130;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=AD08_RS23130;old_locus_tag=AD08_5138 NZ_JHDJ01000054.1 Protein Homology CDS 24661 26904 . - 0 ID=cds-WP_032217655.1;Parent=gene-AD08_RS23130;Dbxref=Genbank:WP_032217655.1;Name=WP_032217655.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000009331.1;locus_tag=AD08_RS23130;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_032217655.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 27157 27888 . - . ID=gene-AD08_RS23125;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=AD08_RS23125;old_locus_tag=AD08_5139 NZ_JHDJ01000054.1 Protein Homology CDS 27157 27888 . - 0 ID=cds-WP_001462105.1;Parent=gene-AD08_RS23125;Dbxref=Genbank:WP_001462105.1;Name=WP_001462105.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000850426.1;locus_tag=AD08_RS23125;product=complement resistance protein TraT;protein_id=WP_001462105.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 27920 28417 . - . ID=gene-AD08_RS0124610;Name=AD08_RS0124610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124610 NZ_JHDJ01000054.1 Protein Homology CDS 27920 28417 . - 0 ID=cds-WP_001749504.1;Parent=gene-AD08_RS0124610;Dbxref=Genbank:WP_001749504.1;Name=WP_001749504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001299727.1;locus_tag=AD08_RS0124610;product=plasmid conjugative transfer entry exclusion TraS family protein;protein_id=WP_001749504.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 28438 31260 . - . ID=gene-AD08_RS23120;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=AD08_RS23120;old_locus_tag=AD08_5141 NZ_JHDJ01000054.1 Protein Homology CDS 28438 31260 . - 0 ID=cds-WP_001696602.1;Parent=gene-AD08_RS23120;Dbxref=Genbank:WP_001696602.1;Name=WP_001696602.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774307.1;locus_tag=AD08_RS23120;product=conjugal transfer mating pair stabilization protein TraG;protein_id=WP_001696602.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 31257 32630 . - . ID=gene-AD08_RS23115;Name=AD08_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23115;old_locus_tag=AD08_5142 NZ_JHDJ01000054.1 Protein Homology CDS 31257 32630 . - 0 ID=cds-WP_001696604.1;Parent=gene-AD08_RS23115;Dbxref=Genbank:WP_001696604.1;Name=WP_001696604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137361.1;locus_tag=AD08_RS23115;product=conjugal transfer protein TraH;protein_id=WP_001696604.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 32617 33042 . - . ID=gene-AD08_RS23110;Name=trbF;gbkey=Gene;gene=trbF;gene_biotype=protein_coding;locus_tag=AD08_RS23110;old_locus_tag=AD08_5143 NZ_JHDJ01000054.1 Protein Homology CDS 32617 33042 . - 0 ID=cds-WP_001696605.1;Parent=gene-AD08_RS23110;Dbxref=Genbank:WP_001696605.1;Name=WP_001696605.1;gbkey=CDS;gene=trbF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001448114.1;locus_tag=AD08_RS23110;product=F-type conjugal transfer protein TrbF;protein_id=WP_001696605.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 32990 33331 . - . ID=gene-AD08_RS23105;Name=trbJ;gbkey=Gene;gene=trbJ;gene_biotype=protein_coding;locus_tag=AD08_RS23105;old_locus_tag=AD08_5144 NZ_JHDJ01000054.1 Protein Homology CDS 32990 33331 . - 0 ID=cds-WP_001448115.1;Parent=gene-AD08_RS23105;Dbxref=Genbank:WP_001448115.1;Name=WP_001448115.1;gbkey=CDS;gene=trbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001444236.1;locus_tag=AD08_RS23105;product=P-type conjugative transfer protein TrbJ;protein_id=WP_001448115.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 33261 33806 . - . ID=gene-AD08_RS23100;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=AD08_RS23100;old_locus_tag=AD08_5145 NZ_JHDJ01000054.1 Protein Homology CDS 33261 33806 . - 0 ID=cds-WP_000059832.1;Parent=gene-AD08_RS23100;Dbxref=Genbank:WP_000059832.1;Name=WP_000059832.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052622.1;locus_tag=AD08_RS23100;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WP_000059832.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 33793 34077 . - . ID=gene-AD08_RS23095;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=AD08_RS23095;old_locus_tag=AD08_5146 NZ_JHDJ01000054.1 Protein Homology CDS 33793 34077 . - 0 ID=cds-WP_000623730.1;Parent=gene-AD08_RS23095;Dbxref=Genbank:WP_000623730.1;Name=WP_000623730.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617873.1;locus_tag=AD08_RS23095;product=type-F conjugative transfer system pilin chaperone TraQ;protein_id=WP_000623730.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 34204 34542 . - . ID=gene-AD08_RS23090;Name=trbA;gbkey=Gene;gene=trbA;gene_biotype=protein_coding;locus_tag=AD08_RS23090;old_locus_tag=AD08_5147 NZ_JHDJ01000054.1 Protein Homology CDS 34204 34542 . - 0 ID=cds-WP_001287901.1;Parent=gene-AD08_RS23090;Dbxref=Genbank:WP_001287901.1;Name=WP_001287901.1;gbkey=CDS;gene=trbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287890.1;locus_tag=AD08_RS23090;product=conjugal transfer protein TrbA;protein_id=WP_001287901.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 34558 35301 . - . ID=gene-AD08_RS23085;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=AD08_RS23085;old_locus_tag=AD08_5148 NZ_JHDJ01000054.1 Protein Homology CDS 34558 35301 . - 0 ID=cds-WP_001403429.1;Parent=gene-AD08_RS23085;Dbxref=Genbank:WP_001403429.1;Name=WP_001403429.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001030376.1;locus_tag=AD08_RS23085;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WP_001403429.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 35294 35551 . - . ID=gene-AD08_RS23080;Name=trbE;gbkey=Gene;gene=trbE;gene_biotype=protein_coding;locus_tag=AD08_RS23080;old_locus_tag=AD08_5149 NZ_JHDJ01000054.1 Protein Homology CDS 35294 35551 . - 0 ID=cds-WP_000864320.1;Parent=gene-AD08_RS23080;Dbxref=Genbank:WP_000864320.1;Name=WP_000864320.1;gbkey=CDS;gene=trbE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864329.1;locus_tag=AD08_RS23080;product=conjugal transfer protein TrbE;protein_id=WP_000864320.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 35578 37386 . - . ID=gene-AD08_RS23075;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=AD08_RS23075;old_locus_tag=AD08_5150 NZ_JHDJ01000054.1 Protein Homology CDS 35578 37386 . - 0 ID=cds-WP_032179463.1;Parent=gene-AD08_RS23075;Dbxref=Genbank:WP_032179463.1;Name=WP_032179463.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001756807.1;locus_tag=AD08_RS23075;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WP_032179463.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 37383 38021 . - . ID=gene-AD08_RS23070;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=AD08_RS23070;old_locus_tag=AD08_5151 NZ_JHDJ01000054.1 Protein Homology CDS 37383 38021 . - 0 ID=cds-WP_001080257.1;Parent=gene-AD08_RS23070;Dbxref=Genbank:WP_001080257.1;Name=WP_001080257.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001473203.1;locus_tag=AD08_RS23070;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WP_001080257.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 38030 38335 . - . ID=gene-AD08_RS0124615;Name=AD08_RS0124615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124615 NZ_JHDJ01000054.1 Protein Homology CDS 38030 38335 . - 0 ID=cds-WP_000224411.1;Parent=gene-AD08_RS0124615;Dbxref=Genbank:WP_000224411.1;Name=WP_000224411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001505125.1;locus_tag=AD08_RS0124615;product=hypothetical protein;protein_id=WP_000224411.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 38365 39357 . - . ID=gene-AD08_RS23065;Name=traU;gbkey=Gene;gene=traU;gene_biotype=protein_coding;locus_tag=AD08_RS23065;old_locus_tag=AD08_5152 NZ_JHDJ01000054.1 Protein Homology CDS 38365 39357 . - 0 ID=cds-WP_000830838.1;Parent=gene-AD08_RS23065;Dbxref=Genbank:WP_000830838.1;Name=WP_000830838.1;gbkey=CDS;gene=traU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490576.1;locus_tag=AD08_RS23065;product=conjugal transfer pilus assembly protein TraU;protein_id=WP_000830838.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 39354 39986 . - . ID=gene-AD08_RS23060;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=AD08_RS23060;old_locus_tag=AD08_5153 NZ_JHDJ01000054.1 Protein Homology CDS 39354 39986 . - 0 ID=cds-WP_001203720.1;Parent=gene-AD08_RS23060;Dbxref=Genbank:WP_001203720.1;Name=WP_001203720.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001203750.1;locus_tag=AD08_RS23060;product=type-F conjugative transfer system protein TraW;protein_id=WP_001203720.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 39983 40369 . - . ID=gene-AD08_RS23055;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=AD08_RS23055;old_locus_tag=AD08_5154 NZ_JHDJ01000054.1 Protein Homology CDS 39983 40369 . - 0 ID=cds-WP_032171831.1;Parent=gene-AD08_RS23055;Dbxref=Genbank:WP_032171831.1;Name=WP_032171831.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490574.1;locus_tag=AD08_RS23055;product=type-F conjugative transfer system protein TrbI;protein_id=WP_032171831.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 40366 42993 . - . ID=gene-AD08_RS23050;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=AD08_RS23050;old_locus_tag=AD08_5155 NZ_JHDJ01000054.1 Protein Homology CDS 40366 42993 . - 0 ID=cds-WP_032171834.1;Parent=gene-AD08_RS23050;Dbxref=Genbank:WP_032171834.1;Name=WP_032171834.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064255.1;locus_tag=AD08_RS23050;product=type IV secretion system protein TraC;protein_id=WP_032171834.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 43153 43374 . - . ID=gene-AD08_RS27880;Name=traR;gbkey=Gene;gene=traR;gene_biotype=protein_coding;locus_tag=AD08_RS27880;old_locus_tag=AD08_5157 NZ_JHDJ01000054.1 Protein Homology CDS 43153 43374 . - 0 ID=cds-WP_001278978.1;Parent=gene-AD08_RS27880;Dbxref=Genbank:WP_001278978.1;Name=WP_001278978.1;gbkey=CDS;gene=traR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490571.1;locus_tag=AD08_RS27880;product=conjugal transfer protein TraR;protein_id=WP_001278978.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 43509 44024 . - . ID=gene-AD08_RS23040;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=AD08_RS23040;old_locus_tag=AD08_5158 NZ_JHDJ01000054.1 Protein Homology CDS 43509 44024 . - 0 ID=cds-WP_000809893.1;Parent=gene-AD08_RS23040;Dbxref=Genbank:WP_000809893.1;Name=WP_000809893.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233168.1;locus_tag=AD08_RS23040;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WP_000809893.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 44021 44272 . - . ID=gene-AD08_RS23035;Name=AD08_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23035;old_locus_tag=AD08_5159 NZ_JHDJ01000054.1 Protein Homology CDS 44021 44272 . - 0 ID=cds-WP_001038341.1;Parent=gene-AD08_RS23035;Dbxref=Genbank:WP_001038341.1;Name=WP_001038341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001038337.1;locus_tag=AD08_RS23035;product=conjugal transfer protein TrbG;protein_id=WP_001038341.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 44265 44618 . - . ID=gene-AD08_RS23030;Name=AD08_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23030;old_locus_tag=AD08_5160 NZ_JHDJ01000054.1 Protein Homology CDS 44265 44618 . - 0 ID=cds-WP_071528018.1;Parent=gene-AD08_RS23030;Dbxref=Genbank:WP_071528018.1;Name=WP_071528018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001377845.1;locus_tag=AD08_RS23030;product=conjugal transfer protein TrbD;protein_id=WP_071528018.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 44572 45156 . - . ID=gene-AD08_RS23025;Name=traP;gbkey=Gene;gene=traP;gene_biotype=protein_coding;locus_tag=AD08_RS23025;old_locus_tag=AD08_5161 NZ_JHDJ01000054.1 Protein Homology CDS 44572 45156 . - 0 ID=cds-WP_000002795.1;Parent=gene-AD08_RS23025;Dbxref=Genbank:WP_000002795.1;Name=WP_000002795.1;gbkey=CDS;gene=traP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528624.1;locus_tag=AD08_RS23025;product=conjugal transfer protein TraP;protein_id=WP_000002795.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 45146 46573 . - . ID=gene-AD08_RS23020;Name=AD08_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS23020;old_locus_tag=AD08_5162 NZ_JHDJ01000054.1 Protein Homology CDS 45146 46573 . - 0 ID=cds-WP_000146638.1;Parent=gene-AD08_RS23020;Dbxref=Genbank:WP_000146638.1;Name=WP_000146638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553749.1;locus_tag=AD08_RS23020;product=conjugal transfer protein TraB;protein_id=WP_000146638.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 46573 47277 . - . ID=gene-AD08_RS23015;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=AD08_RS23015;old_locus_tag=AD08_5163 NZ_JHDJ01000054.1 Protein Homology CDS 46573 47277 . - 0 ID=cds-WP_072095570.1;Parent=gene-AD08_RS23015;Dbxref=Genbank:WP_072095570.1;Name=WP_072095570.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003982266.1;locus_tag=AD08_RS23015;product=type-F conjugative transfer system secretin TraK;protein_id=WP_072095570.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 47288 47854 . - . ID=gene-AD08_RS23010;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=AD08_RS23010;old_locus_tag=AD08_5164 NZ_JHDJ01000054.1 Protein Homology CDS 47288 47854 . - 0 ID=cds-WP_000399804.1;Parent=gene-AD08_RS23010;Dbxref=Genbank:WP_000399804.1;Name=WP_000399804.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490565.1;locus_tag=AD08_RS23010;product=type IV conjugative transfer system protein TraE;protein_id=WP_000399804.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 47876 48187 . - . ID=gene-AD08_RS23005;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=AD08_RS23005;old_locus_tag=AD08_5165 NZ_JHDJ01000054.1 Protein Homology CDS 47876 48187 . - 0 ID=cds-WP_000012106.1;Parent=gene-AD08_RS23005;Dbxref=Genbank:WP_000012106.1;Name=WP_000012106.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490564.1;locus_tag=AD08_RS23005;product=type IV conjugative transfer system protein TraL;protein_id=WP_000012106.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 48192 48554 . - . ID=gene-AD08_RS23000;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=AD08_RS23000;old_locus_tag=AD08_5166 NZ_JHDJ01000054.1 Protein Homology CDS 48192 48554 . - 0 ID=cds-WP_001098998.1;Parent=gene-AD08_RS23000;Dbxref=Genbank:WP_001098998.1;Name=WP_001098998.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001668211.1;locus_tag=AD08_RS23000;product=type IV conjugative transfer system pilin TraA;protein_id=WP_001098998.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 48588 48815 . - . ID=gene-AD08_RS0124620;Name=traY;gbkey=Gene;gene=traY;gene_biotype=protein_coding;locus_tag=AD08_RS0124620 NZ_JHDJ01000054.1 Protein Homology CDS 48588 48815 . - 0 ID=cds-WP_001254388.1;Parent=gene-AD08_RS0124620;Dbxref=Genbank:WP_001254388.1;Name=WP_001254388.1;gbkey=CDS;gene=traY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676655.1;locus_tag=AD08_RS0124620;product=conjugal transfer relaxosome protein TraY;protein_id=WP_001254388.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 48909 49595 . - . ID=gene-AD08_RS22995;Name=AD08_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22995;old_locus_tag=AD08_5168 NZ_JHDJ01000054.1 Protein Homology CDS 48909 49595 . - 0 ID=cds-WP_000332487.1;Parent=gene-AD08_RS22995;Dbxref=Genbank:WP_000332487.1;Name=WP_000332487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001496379.1;locus_tag=AD08_RS22995;product=PAS domain-containing protein;protein_id=WP_000332487.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 49789 50172 . - . ID=gene-AD08_RS0124625;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=AD08_RS0124625 NZ_JHDJ01000054.1 Protein Homology CDS 49789 50172 . - 0 ID=cds-WP_001151564.1;Parent=gene-AD08_RS0124625;Dbxref=Genbank:WP_001151564.1;Name=WP_001151564.1;gbkey=CDS;gene=traM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151562.1;locus_tag=AD08_RS0124625;product=relaxosome protein TraM;protein_id=WP_001151564.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 50458 51105 . + . ID=gene-AD08_RS22990;Name=AD08_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22990;old_locus_tag=AD08_5170 NZ_JHDJ01000054.1 Protein Homology CDS 50458 51105 . + 0 ID=cds-WP_000614287.1;Parent=gene-AD08_RS22990;Dbxref=Genbank:WP_000614287.1;Name=WP_000614287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000614282.1;locus_tag=AD08_RS22990;product=transglycosylase SLT domain-containing protein;protein_id=WP_000614287.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 51402 52223 . - . ID=gene-AD08_RS22985;Name=AD08_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22985;old_locus_tag=AD08_5171 NZ_JHDJ01000054.1 Protein Homology CDS 51402 52223 . - 0 ID=cds-WP_001234441.1;Parent=gene-AD08_RS22985;Dbxref=Genbank:WP_001234441.1;Name=WP_001234441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=AD08_RS22985;product=DUF945 domain-containing protein;protein_id=WP_001234441.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 52333 52629 . - . ID=gene-AD08_RS22980;Name=AD08_RS22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22980;old_locus_tag=AD08_5172 NZ_JHDJ01000054.1 Protein Homology CDS 52333 52629 . - 0 ID=cds-WP_001272251.1;Parent=gene-AD08_RS22980;Dbxref=Genbank:WP_001272251.1;Name=WP_001272251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001545326.1;locus_tag=AD08_RS22980;product=hypothetical protein;protein_id=WP_001272251.1;transl_table=11 NZ_JHDJ01000054.1 RefSeq gene 52855 53046 . - . ID=gene-AD08_RS30165;Name=AD08_RS30165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30165 NZ_JHDJ01000054.1 Protein Homology CDS 52855 53046 . - 0 ID=cds-WP_032219234.1;Parent=gene-AD08_RS30165;Dbxref=Genbank:WP_032219234.1;Name=WP_032219234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001668326.1;locus_tag=AD08_RS30165;product=hypothetical protein;protein_id=WP_032219234.1;transl_table=11 ##sequence-region NZ_JHDJ01000055.1 1 43407 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000055.1 RefSeq region 1 43407 . + . ID=NZ_JHDJ01000055.1:1..43407;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000055.1 RefSeq gene 1 588 . + . ID=gene-AD08_RS22975;Name=AD08_RS22975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22975;old_locus_tag=AD08_5173;partial=true;start_range=.,1 NZ_JHDJ01000055.1 Protein Homology CDS 1 588 . + 0 ID=cds-WP_019842912.1;Parent=gene-AD08_RS22975;Dbxref=Genbank:WP_019842912.1;Name=WP_019842912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AD08_RS22975;partial=true;product=translation elongation factor Tu;protein_id=WP_019842912.1;start_range=.,1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 880 3573 . + . ID=gene-AD08_RS22970;Name=chiA;gbkey=Gene;gene=chiA;gene_biotype=protein_coding;locus_tag=AD08_RS22970;old_locus_tag=AD08_5174 NZ_JHDJ01000055.1 Protein Homology CDS 880 3573 . + 0 ID=cds-WP_032217664.1;Parent=gene-AD08_RS22970;Dbxref=Genbank:WP_032217664.1;Name=WP_032217664.1;gbkey=CDS;gene=chiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417797.1;locus_tag=AD08_RS22970;product=bifunctional chitinase/lysozyme;protein_id=WP_032217664.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 3742 3936 . + . ID=gene-AD08_RS22965;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=AD08_RS22965;old_locus_tag=AD08_5175 NZ_JHDJ01000055.1 Protein Homology CDS 3742 3936 . + 0 ID=cds-WP_000289085.1;Parent=gene-AD08_RS22965;Dbxref=Genbank:WP_000289085.1;Name=WP_000289085.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417796.1;locus_tag=AD08_RS22965;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289085.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 4008 4484 . + . ID=gene-AD08_RS22960;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=AD08_RS22960;old_locus_tag=AD08_5176 NZ_JHDJ01000055.1 Protein Homology CDS 4008 4484 . + 0 ID=cds-WP_000675504.1;Parent=gene-AD08_RS22960;Dbxref=Genbank:WP_000675504.1;Name=WP_000675504.1;gbkey=CDS;gene=bfr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417795.1;locus_tag=AD08_RS22960;product=bacterioferritin;protein_id=WP_000675504.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 4513 5190 . - . ID=gene-AD08_RS22955;Name=AD08_RS22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22955;old_locus_tag=AD08_5177 NZ_JHDJ01000055.1 Protein Homology CDS 4513 5190 . - 0 ID=cds-WP_000178161.1;Parent=gene-AD08_RS22955;Dbxref=Genbank:WP_000178161.1;Name=WP_000178161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417794.1;locus_tag=AD08_RS22955;product=prepilin peptidase GspO;protein_id=WP_000178161.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 5190 5651 . - . ID=gene-AD08_RS22950;Name=AD08_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22950;old_locus_tag=AD08_5178 NZ_JHDJ01000055.1 Protein Homology CDS 5190 5651 . - 0 ID=cds-WP_001295161.1;Parent=gene-AD08_RS22950;Dbxref=Genbank:WP_001295161.1;Name=WP_001295161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417793.2;locus_tag=AD08_RS22950;product=type II secretion system protein GspM;protein_id=WP_001295161.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 5648 6811 . - . ID=gene-AD08_RS22945;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=AD08_RS22945;old_locus_tag=AD08_5179 NZ_JHDJ01000055.1 Protein Homology CDS 5648 6811 . - 0 ID=cds-WP_001115238.1;Parent=gene-AD08_RS22945;Dbxref=Genbank:WP_001115238.1;Name=WP_001115238.1;gbkey=CDS;gene=gspL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417792.2;locus_tag=AD08_RS22945;product=type II secretion system protein GspL;protein_id=WP_001115238.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 6826 7809 . - . ID=gene-AD08_RS22940;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=AD08_RS22940;old_locus_tag=AD08_5180 NZ_JHDJ01000055.1 Protein Homology CDS 6826 7809 . - 0 ID=cds-WP_001058522.1;Parent=gene-AD08_RS22940;Dbxref=Genbank:WP_001058522.1;Name=WP_001058522.1;gbkey=CDS;gene=gspK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417791.1;locus_tag=AD08_RS22940;product=type II secretion system minor pseudopilin GspK;protein_id=WP_001058522.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 7802 8389 . - . ID=gene-AD08_RS22935;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=AD08_RS22935;old_locus_tag=AD08_5181 NZ_JHDJ01000055.1 Protein Homology CDS 7802 8389 . - 0 ID=cds-WP_000610634.1;Parent=gene-AD08_RS22935;Dbxref=Genbank:WP_000610634.1;Name=WP_000610634.1;gbkey=CDS;gene=gspJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417790.1;locus_tag=AD08_RS22935;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_000610634.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 8382 8759 . - . ID=gene-AD08_RS22930;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=AD08_RS22930;old_locus_tag=AD08_5182 NZ_JHDJ01000055.1 Protein Homology CDS 8382 8759 . - 0 ID=cds-WP_001041743.1;Parent=gene-AD08_RS22930;Dbxref=Genbank:WP_001041743.1;Name=WP_001041743.1;gbkey=CDS;gene=gspI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417789.4;locus_tag=AD08_RS22930;product=type II secretion system minor pseudopilin GspI;protein_id=WP_001041743.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 8756 9265 . - . ID=gene-AD08_RS22925;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=AD08_RS22925;old_locus_tag=AD08_5183 NZ_JHDJ01000055.1 Protein Homology CDS 8756 9265 . - 0 ID=cds-WP_032217666.1;Parent=gene-AD08_RS22925;Dbxref=Genbank:WP_032217666.1;Name=WP_032217666.1;gbkey=CDS;gene=gspH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417788.1;locus_tag=AD08_RS22925;product=type II secretion system minor pseudopilin GspH;protein_id=WP_032217666.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 9273 9710 . - . ID=gene-AD08_RS30170;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=AD08_RS30170;old_locus_tag=AD08_5184 NZ_JHDJ01000055.1 Protein Homology CDS 9273 9710 . - 0 ID=cds-WP_001202874.1;Parent=gene-AD08_RS30170;Dbxref=Genbank:WP_001202874.1;Name=WP_001202874.1;gbkey=CDS;gene=gspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417787.1;locus_tag=AD08_RS30170;product=type II secretion system major pseudopilin GspG;protein_id=WP_001202874.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 9720 10916 . - . ID=gene-AD08_RS22915;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=AD08_RS22915;old_locus_tag=AD08_5185 NZ_JHDJ01000055.1 Protein Homology CDS 9720 10916 . - 0 ID=cds-WP_001463730.1;Parent=gene-AD08_RS22915;Dbxref=Genbank:WP_001463730.1;Name=WP_001463730.1;gbkey=CDS;gene=gspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417786.1;locus_tag=AD08_RS22915;product=type II secretion system inner membrane protein GspF;protein_id=WP_001463730.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 10913 12394 . - . ID=gene-AD08_RS22910;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AD08_RS22910;old_locus_tag=AD08_5186 NZ_JHDJ01000055.1 Protein Homology CDS 10913 12394 . - 0 ID=cds-WP_001219894.1;Parent=gene-AD08_RS22910;Dbxref=Genbank:WP_001219894.1;Name=WP_001219894.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417785.1;locus_tag=AD08_RS22910;product=type II secretion system ATPase GspE;protein_id=WP_001219894.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 12404 14356 . - . ID=gene-AD08_RS22905;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=AD08_RS22905;old_locus_tag=AD08_5187 NZ_JHDJ01000055.1 Protein Homology CDS 12404 14356 . - 0 ID=cds-WP_001326512.1;Parent=gene-AD08_RS22905;Dbxref=Genbank:WP_001326512.1;Name=WP_001326512.1;gbkey=CDS;gene=gspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417784.4;locus_tag=AD08_RS22905;product=type II secretion system secretin GspD;protein_id=WP_001326512.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 14340 15155 . - . ID=gene-AD08_RS22900;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=AD08_RS22900;old_locus_tag=AD08_5188 NZ_JHDJ01000055.1 Protein Homology CDS 14340 15155 . - 0 ID=cds-WP_001142708.1;Parent=gene-AD08_RS22900;Dbxref=Genbank:WP_001142708.1;Name=WP_001142708.1;gbkey=CDS;gene=gspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417783.1;locus_tag=AD08_RS22900;product=type II secretion system protein GspC;protein_id=WP_001142708.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 15335 16804 . + . ID=gene-AD08_RS22895;Name=gspA;gbkey=Gene;gene=gspA;gene_biotype=protein_coding;locus_tag=AD08_RS22895;old_locus_tag=AD08_5189 NZ_JHDJ01000055.1 Protein Homology CDS 15335 16804 . + 0 ID=cds-WP_000107576.1;Parent=gene-AD08_RS22895;Dbxref=Genbank:WP_000107576.1;Name=WP_000107576.1;gbkey=CDS;gene=gspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417782.1;locus_tag=AD08_RS22895;product=type II secretion system protein GspA;protein_id=WP_000107576.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 16806 17225 . + . ID=gene-AD08_RS22890;Name=gspB;gbkey=Gene;gene=gspB;gene_biotype=protein_coding;locus_tag=AD08_RS22890;old_locus_tag=AD08_5190 NZ_JHDJ01000055.1 Protein Homology CDS 16806 17225 . + 0 ID=cds-WP_000461450.1;Parent=gene-AD08_RS22890;Dbxref=Genbank:WP_000461450.1;Name=WP_000461450.1;gbkey=CDS;gene=gspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417781.1;locus_tag=AD08_RS22890;product=putative general secretion pathway protein GspB;protein_id=WP_000461450.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 17463 17774 . + . ID=gene-AD08_RS22885;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=AD08_RS22885;old_locus_tag=AD08_5191 NZ_JHDJ01000055.1 Protein Homology CDS 17463 17774 . + 0 ID=cds-WP_001181004.1;Parent=gene-AD08_RS22885;Dbxref=Genbank:WP_001181004.1;Name=WP_001181004.1;gbkey=CDS;gene=rpsJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=AD08_RS22885;product=30S ribosomal protein S10;protein_id=WP_001181004.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 17807 18436 . + . ID=gene-AD08_RS22880;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=AD08_RS22880;old_locus_tag=AD08_5192 NZ_JHDJ01000055.1 Protein Homology CDS 17807 18436 . + 0 ID=cds-WP_000579833.1;Parent=gene-AD08_RS22880;Dbxref=Genbank:WP_000579833.1;Name=WP_000579833.1;gbkey=CDS;gene=rplC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=AD08_RS22880;product=50S ribosomal protein L3;protein_id=WP_000579833.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 18447 19052 . + . ID=gene-AD08_RS22875;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AD08_RS22875;old_locus_tag=AD08_5193 NZ_JHDJ01000055.1 Protein Homology CDS 18447 19052 . + 0 ID=cds-WP_000424395.1;Parent=gene-AD08_RS22875;Dbxref=Genbank:WP_000424395.1;Name=WP_000424395.1;gbkey=CDS;gene=rplD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=AD08_RS22875;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 19049 19351 . + . ID=gene-AD08_RS22870;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=AD08_RS22870;old_locus_tag=AD08_5194 NZ_JHDJ01000055.1 Protein Homology CDS 19049 19351 . + 0 ID=cds-WP_000617544.1;Parent=gene-AD08_RS22870;Dbxref=Genbank:WP_000617544.1;Name=WP_000617544.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=AD08_RS22870;product=50S ribosomal protein L23;protein_id=WP_000617544.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 19369 20190 . + . ID=gene-AD08_RS22865;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=AD08_RS22865;old_locus_tag=AD08_5195 NZ_JHDJ01000055.1 Protein Homology CDS 19369 20190 . + 0 ID=cds-WP_000301864.1;Parent=gene-AD08_RS22865;Dbxref=Genbank:WP_000301864.1;Name=WP_000301864.1;gbkey=CDS;gene=rplB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=AD08_RS22865;product=50S ribosomal protein L2;protein_id=WP_000301864.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 20207 20485 . + . ID=gene-AD08_RS0124630;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=AD08_RS0124630 NZ_JHDJ01000055.1 Protein Homology CDS 20207 20485 . + 0 ID=cds-WP_001138117.1;Parent=gene-AD08_RS0124630;Dbxref=Genbank:WP_001138117.1;Name=WP_001138117.1;gbkey=CDS;gene=rpsS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=AD08_RS0124630;product=30S ribosomal protein S19;protein_id=WP_001138117.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 20500 20832 . + . ID=gene-AD08_RS22860;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=AD08_RS22860;old_locus_tag=AD08_5197 NZ_JHDJ01000055.1 Protein Homology CDS 20500 20832 . + 0 ID=cds-WP_000447529.1;Parent=gene-AD08_RS22860;Dbxref=Genbank:WP_000447529.1;Name=WP_000447529.1;gbkey=CDS;gene=rplV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=AD08_RS22860;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 20850 21551 . + . ID=gene-AD08_RS22855;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=AD08_RS22855;old_locus_tag=AD08_5198 NZ_JHDJ01000055.1 Protein Homology CDS 20850 21551 . + 0 ID=cds-WP_000529945.1;Parent=gene-AD08_RS22855;Dbxref=Genbank:WP_000529945.1;Name=WP_000529945.1;gbkey=CDS;gene=rpsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529946.1;locus_tag=AD08_RS22855;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 21564 21974 . + . ID=gene-AD08_RS22850;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=AD08_RS22850;old_locus_tag=AD08_5199 NZ_JHDJ01000055.1 Protein Homology CDS 21564 21974 . + 0 ID=cds-WP_000941212.1;Parent=gene-AD08_RS22850;Dbxref=Genbank:WP_000941212.1;Name=WP_000941212.1;gbkey=CDS;gene=rplP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=AD08_RS22850;product=50S ribosomal protein L16;protein_id=WP_000941212.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 21974 22165 . + . ID=gene-AD08_RS22845;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=AD08_RS22845;old_locus_tag=AD08_5200 NZ_JHDJ01000055.1 Protein Homology CDS 21974 22165 . + 0 ID=cds-WP_000644741.1;Parent=gene-AD08_RS22845;Dbxref=Genbank:WP_000644741.1;Name=WP_000644741.1;gbkey=CDS;gene=rpmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=AD08_RS22845;product=50S ribosomal protein L29;protein_id=WP_000644741.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 22165 22419 . + . ID=gene-AD08_RS22840;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=AD08_RS22840;old_locus_tag=AD08_5201 NZ_JHDJ01000055.1 Protein Homology CDS 22165 22419 . + 0 ID=cds-WP_000130100.1;Parent=gene-AD08_RS22840;Dbxref=Genbank:WP_000130100.1;Name=WP_000130100.1;gbkey=CDS;gene=rpsQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=AD08_RS22840;product=30S ribosomal protein S17;protein_id=WP_000130100.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 22584 22955 . + . ID=gene-AD08_RS22835;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=AD08_RS22835;old_locus_tag=AD08_5202 NZ_JHDJ01000055.1 Protein Homology CDS 22584 22955 . + 0 ID=cds-WP_000613955.1;Parent=gene-AD08_RS22835;Dbxref=Genbank:WP_000613955.1;Name=WP_000613955.1;gbkey=CDS;gene=rplN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013975775.1;locus_tag=AD08_RS22835;product=50S ribosomal protein L14;protein_id=WP_000613955.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 22966 23280 . + . ID=gene-AD08_RS22830;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AD08_RS22830;old_locus_tag=AD08_5203 NZ_JHDJ01000055.1 Protein Homology CDS 22966 23280 . + 0 ID=cds-WP_000729185.1;Parent=gene-AD08_RS22830;Dbxref=Genbank:WP_000729185.1;Name=WP_000729185.1;gbkey=CDS;gene=rplX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=AD08_RS22830;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 23295 23834 . + . ID=gene-AD08_RS22825;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=AD08_RS22825;old_locus_tag=AD08_5204 NZ_JHDJ01000055.1 Protein Homology CDS 23295 23834 . + 0 ID=cds-WP_001096200.1;Parent=gene-AD08_RS22825;Dbxref=Genbank:WP_001096200.1;Name=WP_001096200.1;gbkey=CDS;gene=rplE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=AD08_RS22825;product=50S ribosomal protein L5;protein_id=WP_001096200.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 23849 24154 . + . ID=gene-AD08_RS22820;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AD08_RS22820;old_locus_tag=AD08_5205 NZ_JHDJ01000055.1 Protein Homology CDS 23849 24154 . + 0 ID=cds-WP_001118930.1;Parent=gene-AD08_RS22820;Dbxref=Genbank:WP_001118930.1;Name=WP_001118930.1;gbkey=CDS;gene=rpsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=AD08_RS22820;product=30S ribosomal protein S14;protein_id=WP_001118930.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 24188 24580 . + . ID=gene-AD08_RS22815;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=AD08_RS22815;old_locus_tag=AD08_5206 NZ_JHDJ01000055.1 Protein Homology CDS 24188 24580 . + 0 ID=cds-WP_000062611.1;Parent=gene-AD08_RS22815;Dbxref=Genbank:WP_000062611.1;Name=WP_000062611.1;gbkey=CDS;gene=rpsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=AD08_RS22815;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 24593 25126 . + . ID=gene-AD08_RS22810;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=AD08_RS22810;old_locus_tag=AD08_5207 NZ_JHDJ01000055.1 Protein Homology CDS 24593 25126 . + 0 ID=cds-WP_000091945.1;Parent=gene-AD08_RS22810;Dbxref=Genbank:WP_000091945.1;Name=WP_000091945.1;gbkey=CDS;gene=rplF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=AD08_RS22810;product=50S ribosomal protein L6;protein_id=WP_000091945.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 25136 25489 . + . ID=gene-AD08_RS22805;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=AD08_RS22805;old_locus_tag=AD08_5208 NZ_JHDJ01000055.1 Protein Homology CDS 25136 25489 . + 0 ID=cds-WP_000358960.1;Parent=gene-AD08_RS22805;Dbxref=Genbank:WP_000358960.1;Name=WP_000358960.1;gbkey=CDS;gene=rplR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=AD08_RS22805;product=50S ribosomal protein L18;protein_id=WP_000358960.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 25504 26007 . + . ID=gene-AD08_RS22800;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=AD08_RS22800;old_locus_tag=AD08_5209 NZ_JHDJ01000055.1 Protein Homology CDS 25504 26007 . + 0 ID=cds-WP_000940121.1;Parent=gene-AD08_RS22800;Dbxref=Genbank:WP_000940121.1;Name=WP_000940121.1;gbkey=CDS;gene=rpsE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=AD08_RS22800;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 26011 26190 . + . ID=gene-AD08_RS22795;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AD08_RS22795;old_locus_tag=AD08_5210 NZ_JHDJ01000055.1 Protein Homology CDS 26011 26190 . + 0 ID=cds-WP_001140433.1;Parent=gene-AD08_RS22795;Dbxref=Genbank:WP_001140433.1;Name=WP_001140433.1;gbkey=CDS;gene=rpmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=AD08_RS22795;product=50S ribosomal protein L30;protein_id=WP_001140433.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 26194 26628 . + . ID=gene-AD08_RS22790;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=AD08_RS22790;old_locus_tag=AD08_5211 NZ_JHDJ01000055.1 Protein Homology CDS 26194 26628 . + 0 ID=cds-WP_001238914.1;Parent=gene-AD08_RS22790;Dbxref=Genbank:WP_001238914.1;Name=WP_001238914.1;gbkey=CDS;gene=rplO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=AD08_RS22790;product=50S ribosomal protein L15;protein_id=WP_001238914.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 26636 27967 . + . ID=gene-AD08_RS22785;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AD08_RS22785;old_locus_tag=AD08_5212 NZ_JHDJ01000055.1 Protein Homology CDS 26636 27967 . + 0 ID=cds-WP_001118861.1;Parent=gene-AD08_RS22785;Dbxref=Genbank:WP_001118861.1;Name=WP_001118861.1;gbkey=CDS;gene=secY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=AD08_RS22785;product=preprotein translocase subunit SecY;protein_id=WP_001118861.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 27999 28115 . + . ID=gene-AD08_RS0124635;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AD08_RS0124635 NZ_JHDJ01000055.1 Protein Homology CDS 27999 28115 . + 0 ID=cds-WP_000868187.1;Parent=gene-AD08_RS0124635;Dbxref=Genbank:WP_000868187.1;Name=WP_000868187.1;gbkey=CDS;gene=rpmJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=AD08_RS0124635;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 28262 28618 . + . ID=gene-AD08_RS22780;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=AD08_RS22780;old_locus_tag=AD08_5213 NZ_JHDJ01000055.1 Protein Homology CDS 28262 28618 . + 0 ID=cds-WP_000090775.1;Parent=gene-AD08_RS22780;Dbxref=Genbank:WP_000090775.1;Name=WP_000090775.1;gbkey=CDS;gene=rpsM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018356918.1;locus_tag=AD08_RS22780;product=30S ribosomal protein S13;protein_id=WP_000090775.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 28635 29024 . + . ID=gene-AD08_RS22775;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=AD08_RS22775;old_locus_tag=AD08_5214 NZ_JHDJ01000055.1 Protein Homology CDS 28635 29024 . + 0 ID=cds-WP_001029684.1;Parent=gene-AD08_RS22775;Dbxref=Genbank:WP_001029684.1;Name=WP_001029684.1;gbkey=CDS;gene=rpsK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=AD08_RS22775;product=30S ribosomal protein S11;protein_id=WP_001029684.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 29058 29678 . + . ID=gene-AD08_RS22770;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=AD08_RS22770;old_locus_tag=AD08_5215 NZ_JHDJ01000055.1 Protein Homology CDS 29058 29678 . + 0 ID=cds-WP_000135224.1;Parent=gene-AD08_RS22770;Dbxref=Genbank:WP_000135224.1;Name=WP_000135224.1;gbkey=CDS;gene=rpsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=AD08_RS22770;product=30S ribosomal protein S4;protein_id=WP_000135224.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 29704 30693 . + . ID=gene-AD08_RS22765;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=AD08_RS22765;old_locus_tag=AD08_5216 NZ_JHDJ01000055.1 Protein Homology CDS 29704 30693 . + 0 ID=cds-WP_001162094.1;Parent=gene-AD08_RS22765;Dbxref=Genbank:WP_001162094.1;Name=WP_001162094.1;gbkey=CDS;gene=rpoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=AD08_RS22765;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 30734 31117 . + . ID=gene-AD08_RS22760;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AD08_RS22760;old_locus_tag=AD08_5217 NZ_JHDJ01000055.1 Protein Homology CDS 30734 31117 . + 0 ID=cds-WP_001216368.1;Parent=gene-AD08_RS22760;Dbxref=Genbank:WP_001216368.1;Name=WP_001216368.1;gbkey=CDS;gene=rplQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312186.1;locus_tag=AD08_RS22760;product=50S ribosomal protein L17;protein_id=WP_001216368.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 31224 31592 . + . ID=gene-AD08_RS22755;Name=AD08_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22755;old_locus_tag=AD08_5218 NZ_JHDJ01000055.1 Protein Homology CDS 31224 31592 . + 0 ID=cds-WP_000266486.1;Parent=gene-AD08_RS22755;Dbxref=Genbank:WP_000266486.1;Name=WP_000266486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417752.1;locus_tag=AD08_RS22755;product=DUF1992 domain-containing protein;protein_id=WP_000266486.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 31603 32028 . + . ID=gene-AD08_RS22750;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=AD08_RS22750;old_locus_tag=AD08_5219 NZ_JHDJ01000055.1 Protein Homology CDS 31603 32028 . + 0 ID=cds-WP_000285607.1;Parent=gene-AD08_RS22750;Dbxref=Genbank:WP_000285607.1;Name=WP_000285607.1;gbkey=CDS;gene=zntR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312184.1;locus_tag=AD08_RS22750;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285607.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 32084 32302 . + . ID=gene-AD08_RS0124640;Name=AD08_RS0124640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124640 NZ_JHDJ01000055.1 Protein Homology CDS 32084 32302 . + 0 ID=cds-WP_000092696.1;Parent=gene-AD08_RS0124640;Dbxref=Genbank:WP_000092696.1;Name=WP_000092696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=AD08_RS0124640;product=alternative ribosome-rescue factor ArfA;protein_id=WP_000092696.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 32299 32709 . - . ID=gene-AD08_RS22745;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=AD08_RS22745;old_locus_tag=AD08_5220 NZ_JHDJ01000055.1 Protein Homology CDS 32299 32709 . - 0 ID=cds-WP_000022442.1;Parent=gene-AD08_RS22745;Dbxref=Genbank:WP_000022442.1;Name=WP_000022442.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312183.1;locus_tag=AD08_RS22745;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000022442.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 32839 34215 . - . ID=gene-AD08_RS22740;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=AD08_RS22740;old_locus_tag=AD08_5221 NZ_JHDJ01000055.1 Protein Homology CDS 32839 34215 . - 0 ID=cds-WP_000691382.1;Parent=gene-AD08_RS22740;Dbxref=Genbank:WP_000691382.1;Name=WP_000691382.1;gbkey=CDS;gene=trkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=AD08_RS22740;product=Trk system potassium transporter TrkA;protein_id=WP_000691382.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 34237 35526 . - . ID=gene-AD08_RS22735;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=AD08_RS22735;old_locus_tag=AD08_5222 NZ_JHDJ01000055.1 Protein Homology CDS 34237 35526 . - 0 ID=cds-WP_000744778.1;Parent=gene-AD08_RS22735;Dbxref=Genbank:WP_000744778.1;Name=WP_000744778.1;gbkey=CDS;gene=rsmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417747.1;locus_tag=AD08_RS22735;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_000744778.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 35572 36519 . - . ID=gene-AD08_RS22730;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AD08_RS22730;old_locus_tag=AD08_5223 NZ_JHDJ01000055.1 Protein Homology CDS 35572 36519 . - 0 ID=cds-WP_000004473.1;Parent=gene-AD08_RS22730;Dbxref=Genbank:WP_000004473.1;Name=WP_000004473.1;gbkey=CDS;gene=fmt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417746.1;locus_tag=AD08_RS22730;product=methionyl-tRNA formyltransferase;protein_id=WP_000004473.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 36534 37043 . - . ID=gene-AD08_RS22725;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=AD08_RS22725;old_locus_tag=AD08_5224 NZ_JHDJ01000055.1 Protein Homology CDS 36534 37043 . - 0 ID=cds-WP_000114984.1;Parent=gene-AD08_RS22725;Dbxref=Genbank:WP_000114984.1;Name=WP_000114984.1;gbkey=CDS;gene=def;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312179.1;locus_tag=AD08_RS22725;product=peptide deformylase;protein_id=WP_000114984.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 37173 38297 . + . ID=gene-AD08_RS22720;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=AD08_RS22720;old_locus_tag=AD08_5225 NZ_JHDJ01000055.1 Protein Homology CDS 37173 38297 . + 0 ID=cds-WP_000228551.1;Parent=gene-AD08_RS22720;Dbxref=Genbank:WP_000228551.1;Name=WP_000228551.1;gbkey=CDS;gene=dprA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026211.1;locus_tag=AD08_RS22720;product=DNA-protecting protein DprA;protein_id=WP_000228551.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 38269 38742 . + . ID=gene-AD08_RS22715;Name=AD08_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22715;old_locus_tag=AD08_5226 NZ_JHDJ01000055.1 Protein Homology CDS 38269 38742 . + 0 ID=cds-WP_000460680.1;Parent=gene-AD08_RS22715;Dbxref=Genbank:WP_000460680.1;Name=WP_000460680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=AD08_RS22715;product=DUF494 domain-containing protein;protein_id=WP_000460680.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 38771 39313 . + . ID=gene-AD08_RS0124645;Name=AD08_RS0124645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124645 NZ_JHDJ01000055.1 Protein Homology CDS 38771 39313 . + 0 ID=cds-WP_001129722.1;Parent=gene-AD08_RS0124645;Dbxref=Genbank:WP_001129722.1;Name=WP_001129722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026210.1;locus_tag=AD08_RS0124645;product=ssDNA-binding protein%2C function unknown;protein_id=WP_001129722.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 39318 39890 . + . ID=gene-AD08_RS22710;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=AD08_RS22710;old_locus_tag=AD08_5228 NZ_JHDJ01000055.1 Protein Homology CDS 39318 39890 . + 0 ID=cds-WP_001301412.1;Parent=gene-AD08_RS22710;Dbxref=Genbank:WP_001301412.1;Name=WP_001301412.1;gbkey=CDS;gene=tsaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417741.1;locus_tag=AD08_RS22710;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001301412.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 39895 40713 . + . ID=gene-AD08_RS22705;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=AD08_RS22705;old_locus_tag=AD08_5229 NZ_JHDJ01000055.1 Protein Homology CDS 39895 40713 . + 0 ID=cds-WP_000451243.1;Parent=gene-AD08_RS22705;Dbxref=Genbank:WP_000451243.1;Name=WP_000451243.1;gbkey=CDS;gene=aroE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417740.1;locus_tag=AD08_RS22705;product=shikimate dehydrogenase;protein_id=WP_000451243.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 40710 40967 . + . ID=gene-AD08_RS0124650;Name=AD08_RS0124650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124650 NZ_JHDJ01000055.1 Protein Homology CDS 40710 40967 . + 0 ID=cds-WP_001070563.1;Parent=gene-AD08_RS0124650;Dbxref=Genbank:WP_001070563.1;Name=WP_001070563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417739.1;locus_tag=AD08_RS0124650;product=DUF1488 domain-containing protein;protein_id=WP_001070563.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 40943 41497 . - . ID=gene-AD08_RS22700;Name=AD08_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22700;old_locus_tag=AD08_5231 NZ_JHDJ01000055.1 Protein Homology CDS 40943 41497 . - 0 ID=cds-WP_001286216.1;Parent=gene-AD08_RS22700;Dbxref=Genbank:WP_001286216.1;Name=WP_001286216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417738.4;locus_tag=AD08_RS22700;product=gamma carbonic anhydrase family protein;protein_id=WP_001286216.1;transl_table=11 NZ_JHDJ01000055.1 RefSeq gene 41971 43407 . + . ID=gene-AD08_RS22695;Name=AD08_RS22695;end_range=43407,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS22695;old_locus_tag=AD08_5233;partial=true NZ_JHDJ01000055.1 RefSeq rRNA 41971 43407 . + . ID=rna-AD08_RS22695;Parent=gene-AD08_RS22695;end_range=43407,.;gbkey=rRNA;locus_tag=AD08_RS22695;partial=true;product=16S ribosomal RNA NZ_JHDJ01000055.1 RefSeq exon 41971 43407 . + . ID=exon-AD08_RS22695-1;Parent=rna-AD08_RS22695;end_range=43407,.;gbkey=rRNA;locus_tag=AD08_RS22695;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDJ01000056.1 1 3788 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000056.1 RefSeq region 1 3788 . + . ID=NZ_JHDJ01000056.1:1..3788;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000056.1 RefSeq pseudogene 1 193 . - . ID=gene-AD08_RS22690;Name=AD08_RS22690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS22690;old_locus_tag=AD08_5234;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000056.1 Protein Homology CDS 1 193 . - 0 ID=cds-AD08_RS22690;Parent=gene-AD08_RS22690;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418588.1;locus_tag=AD08_RS22690;partial=true;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000056.1 RefSeq gene 192 1331 . + . ID=gene-AD08_RS22685;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AD08_RS22685;old_locus_tag=AD08_5235 NZ_JHDJ01000056.1 Protein Homology CDS 192 1331 . + 0 ID=cds-WP_001294219.1;Parent=gene-AD08_RS22685;Dbxref=Genbank:WP_001294219.1;Name=WP_001294219.1;gbkey=CDS;gene=queG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=AD08_RS22685;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001294219.1;transl_table=11 NZ_JHDJ01000056.1 RefSeq gene 1314 1367 . - . ID=gene-AD08_RS30950;Name=AD08_RS30950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30950 NZ_JHDJ01000056.1 Protein Homology CDS 1314 1367 . - 0 ID=cds-WP_010723271.1;Parent=gene-AD08_RS30950;Dbxref=Genbank:WP_010723271.1;Name=WP_010723271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791261.1;locus_tag=AD08_RS30950;product=hypothetical protein;protein_id=WP_010723271.1;transl_table=11 NZ_JHDJ01000056.1 RefSeq gene 1601 1676 . - . ID=gene-AD08_RS22680;Name=AD08_RS22680;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS22680;old_locus_tag=AD08_5236 NZ_JHDJ01000056.1 tRNAscan-SE tRNA 1601 1676 . - . ID=rna-AD08_RS22680;Parent=gene-AD08_RS22680;anticodon=(pos:complement(1641..1643));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22680;product=tRNA-Gly NZ_JHDJ01000056.1 tRNAscan-SE exon 1601 1676 . - . ID=exon-AD08_RS22680-1;Parent=rna-AD08_RS22680;anticodon=(pos:complement(1641..1643));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22680;product=tRNA-Gly NZ_JHDJ01000056.1 RefSeq gene 1712 1787 . - . ID=gene-AD08_RS22675;Name=AD08_RS22675;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS22675;old_locus_tag=AD08_5237 NZ_JHDJ01000056.1 tRNAscan-SE tRNA 1712 1787 . - . ID=rna-AD08_RS22675;Parent=gene-AD08_RS22675;anticodon=(pos:complement(1752..1754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22675;product=tRNA-Gly NZ_JHDJ01000056.1 tRNAscan-SE exon 1712 1787 . - . ID=exon-AD08_RS22675-1;Parent=rna-AD08_RS22675;anticodon=(pos:complement(1752..1754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22675;product=tRNA-Gly NZ_JHDJ01000056.1 RefSeq gene 1824 1899 . - . ID=gene-AD08_RS22670;Name=AD08_RS22670;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS22670;old_locus_tag=AD08_5238 NZ_JHDJ01000056.1 tRNAscan-SE tRNA 1824 1899 . - . ID=rna-AD08_RS22670;Parent=gene-AD08_RS22670;anticodon=(pos:complement(1864..1866));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22670;product=tRNA-Gly NZ_JHDJ01000056.1 tRNAscan-SE exon 1824 1899 . - . ID=exon-AD08_RS22670-1;Parent=rna-AD08_RS22670;anticodon=(pos:complement(1864..1866));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22670;product=tRNA-Gly NZ_JHDJ01000056.1 RefSeq gene 2110 2655 . - . ID=gene-AD08_RS22665;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AD08_RS22665;old_locus_tag=AD08_5239 NZ_JHDJ01000056.1 Protein Homology CDS 2110 2655 . - 0 ID=cds-WP_001295188.1;Parent=gene-AD08_RS22665;Dbxref=Genbank:WP_001295188.1;Name=WP_001295188.1;gbkey=CDS;gene=orn;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418586.4;locus_tag=AD08_RS22665;product=oligoribonuclease;protein_id=WP_001295188.1;transl_table=11 NZ_JHDJ01000056.1 RefSeq gene 2750 3788 . + . ID=gene-AD08_RS22660;Name=rsgA;end_range=3788,.;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AD08_RS22660;old_locus_tag=AD08_5240;partial=true NZ_JHDJ01000056.1 Protein Homology CDS 2750 3788 . + 0 ID=cds-WP_032217675.1;Parent=gene-AD08_RS22660;Dbxref=Genbank:WP_032217675.1;Name=WP_032217675.1;end_range=3788,.;gbkey=CDS;gene=rsgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418585.4;locus_tag=AD08_RS22660;partial=true;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_032217675.1;transl_table=11 ##sequence-region NZ_JHDJ01000057.1 1 928 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000057.1 RefSeq region 1 928 . + . ID=NZ_JHDJ01000057.1:1..928;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000057.1 RefSeq gene 497 838 . - . ID=gene-AD08_RS22655;Name=AD08_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22655;old_locus_tag=AD08_5241 NZ_JHDJ01000057.1 Protein Homology CDS 497 838 . - 0 ID=cds-WP_077698994.1;Parent=gene-AD08_RS22655;Dbxref=Genbank:WP_077698994.1;Name=WP_077698994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016237884.1;locus_tag=AD08_RS22655;product=DUF4376 domain-containing protein;protein_id=WP_077698994.1;transl_table=11 ##sequence-region NZ_JHDJ01000058.1 1 1852 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000058.1 RefSeq region 1 1852 . + . ID=NZ_JHDJ01000058.1:1..1852;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000058.1 RefSeq gene 460 1701 . + . ID=gene-AD08_RS22650;Name=AD08_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22650;old_locus_tag=AD08_5242 NZ_JHDJ01000058.1 Protein Homology CDS 460 1701 . + 0 ID=cds-WP_000101915.1;Parent=gene-AD08_RS22650;Dbxref=Genbank:WP_000101915.1;Name=WP_000101915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101912.1;locus_tag=AD08_RS22650;product=tyrosine-type recombinase/integrase;protein_id=WP_000101915.1;transl_table=11 ##sequence-region NZ_JHDJ01000059.1 1 782 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000059.1 RefSeq region 1 782 . + . ID=NZ_JHDJ01000059.1:1..782;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000059.1 RefSeq gene 97 183 . + . ID=gene-AD08_RS22645;Name=AD08_RS22645;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS22645;old_locus_tag=AD08_5244 NZ_JHDJ01000059.1 tRNAscan-SE tRNA 97 183 . + . ID=rna-AD08_RS22645;Parent=gene-AD08_RS22645;anticodon=(pos:131..133);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22645;product=tRNA-Leu NZ_JHDJ01000059.1 tRNAscan-SE exon 97 183 . + . ID=exon-AD08_RS22645-1;Parent=rna-AD08_RS22645;anticodon=(pos:131..133);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22645;product=tRNA-Leu NZ_JHDJ01000059.1 RefSeq gene 218 304 . + . ID=gene-AD08_RS22640;Name=AD08_RS22640;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS22640;old_locus_tag=AD08_5245 NZ_JHDJ01000059.1 tRNAscan-SE tRNA 218 304 . + . ID=rna-AD08_RS22640;Parent=gene-AD08_RS22640;anticodon=(pos:252..254);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22640;product=tRNA-Leu NZ_JHDJ01000059.1 tRNAscan-SE exon 218 304 . + . ID=exon-AD08_RS22640-1;Parent=rna-AD08_RS22640;anticodon=(pos:252..254);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22640;product=tRNA-Leu NZ_JHDJ01000059.1 RefSeq gene 333 419 . + . ID=gene-AD08_RS22635;Name=AD08_RS22635;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS22635;old_locus_tag=AD08_5246 NZ_JHDJ01000059.1 tRNAscan-SE tRNA 333 419 . + . ID=rna-AD08_RS22635;Parent=gene-AD08_RS22635;anticodon=(pos:367..369);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22635;product=tRNA-Leu NZ_JHDJ01000059.1 tRNAscan-SE exon 333 419 . + . ID=exon-AD08_RS22635-1;Parent=rna-AD08_RS22635;anticodon=(pos:367..369);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22635;product=tRNA-Leu NZ_JHDJ01000059.1 RefSeq gene 454 540 . + . ID=gene-AD08_RS22630;Name=AD08_RS22630;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS22630;old_locus_tag=AD08_5247 NZ_JHDJ01000059.1 tRNAscan-SE tRNA 454 540 . + . ID=rna-AD08_RS22630;Parent=gene-AD08_RS22630;anticodon=(pos:488..490);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22630;product=tRNA-Leu NZ_JHDJ01000059.1 tRNAscan-SE exon 454 540 . + . ID=exon-AD08_RS22630-1;Parent=rna-AD08_RS22630;anticodon=(pos:488..490);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22630;product=tRNA-Leu NZ_JHDJ01000059.1 RefSeq gene 579 782 . - . ID=gene-AD08_RS22625;Name=AD08_RS22625;end_range=782,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22625;old_locus_tag=AD08_5248;partial=true NZ_JHDJ01000059.1 Protein Homology CDS 579 782 . - 0 ID=cds-WP_050436502.1;Parent=gene-AD08_RS22625;Dbxref=Genbank:WP_050436502.1;Name=WP_050436502.1;end_range=782,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588478.1;locus_tag=AD08_RS22625;partial=true;product=DUF1435 domain-containing protein;protein_id=WP_050436502.1;transl_table=11 ##sequence-region NZ_JHDJ01000060.1 1 659 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000060.1 RefSeq region 1 659 . + . ID=NZ_JHDJ01000060.1:1..659;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000060.1 RefSeq gene 1 659 . - . ID=gene-AD08_RS22620;Name=AD08_RS22620;end_range=659,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22620;old_locus_tag=AD08_5249;partial=true;start_range=.,1 NZ_JHDJ01000060.1 Protein Homology CDS 1 659 . - 0 ID=cds-WP_162752710.1;Parent=gene-AD08_RS22620;Dbxref=Genbank:WP_162752710.1;Name=WP_162752710.1;end_range=659,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309807.1;locus_tag=AD08_RS22620;partial=true;product=site-specific DNA-methyltransferase;protein_id=WP_162752710.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDJ01000061.1 1 1693 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000061.1 RefSeq region 1 1693 . + . ID=NZ_JHDJ01000061.1:1..1693;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000061.1 RefSeq gene 1 163 . - . ID=gene-AD08_RS27890;Name=AD08_RS27890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS27890;old_locus_tag=AD08_5250;partial=true;start_range=.,1 NZ_JHDJ01000061.1 Protein Homology CDS 1 163 . - 0 ID=cds-WP_001523639.1;Parent=gene-AD08_RS27890;Dbxref=Genbank:WP_001523639.1;Name=WP_001523639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310395.1;locus_tag=AD08_RS27890;partial=true;product=LysR family transcriptional regulator;protein_id=WP_001523639.1;start_range=.,1;transl_table=11 NZ_JHDJ01000061.1 RefSeq gene 276 1487 . + . ID=gene-AD08_RS22615;Name=AD08_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22615;old_locus_tag=AD08_5251 NZ_JHDJ01000061.1 Protein Homology CDS 276 1487 . + 0 ID=cds-WP_001182363.1;Parent=gene-AD08_RS22615;Dbxref=Genbank:WP_001182363.1;Name=WP_001182363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AD08_RS22615;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_001182363.1;transl_table=11 ##sequence-region NZ_JHDJ01000062.1 1 385 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000062.1 RefSeq region 1 385 . + . ID=NZ_JHDJ01000062.1:1..385;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 ##sequence-region NZ_JHDJ01000063.1 1 5769 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000063.1 RefSeq region 1 5769 . + . ID=NZ_JHDJ01000063.1:1..5769;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000063.1 RefSeq gene 604 765 . - . ID=gene-AD08_RS0124665;Name=AD08_RS0124665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124665 NZ_JHDJ01000063.1 Protein Homology CDS 604 765 . - 0 ID=cds-WP_001696677.1;Parent=gene-AD08_RS0124665;Dbxref=Genbank:WP_001696677.1;Name=WP_001696677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118124.1;locus_tag=AD08_RS0124665;product=type I toxin-antitoxin system Hok family toxin;protein_id=WP_001696677.1;transl_table=11 NZ_JHDJ01000063.1 RefSeq gene 941 1459 . - . ID=gene-AD08_RS22610;Name=AD08_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22610;old_locus_tag=AD08_5252 NZ_JHDJ01000063.1 Protein Homology CDS 941 1459 . - 0 ID=cds-WP_001696679.1;Parent=gene-AD08_RS22610;Dbxref=Genbank:WP_001696679.1;Name=WP_001696679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004101284.1;locus_tag=AD08_RS22610;product=hypothetical protein;protein_id=WP_001696679.1;transl_table=11 NZ_JHDJ01000063.1 RefSeq gene 1459 2178 . - . ID=gene-AD08_RS22605;Name=AD08_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22605;old_locus_tag=AD08_5253 NZ_JHDJ01000063.1 Protein Homology CDS 1459 2178 . - 0 ID=cds-WP_001387922.1;Parent=gene-AD08_RS22605;Dbxref=Genbank:WP_001387922.1;Name=WP_001387922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001763821.1;locus_tag=AD08_RS22605;product=plasmid SOS inhibition protein A;protein_id=WP_001387922.1;transl_table=11 NZ_JHDJ01000063.1 RefSeq gene 2175 2609 . - . ID=gene-AD08_RS22600;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=AD08_RS22600;old_locus_tag=AD08_5254 NZ_JHDJ01000063.1 Protein Homology CDS 2175 2609 . - 0 ID=cds-WP_000845949.1;Parent=gene-AD08_RS22600;Dbxref=Genbank:WP_000845949.1;Name=WP_000845949.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1;locus_tag=AD08_RS22600;product=conjugation system SOS inhibitor PsiB;protein_id=WP_000845949.1;transl_table=11 NZ_JHDJ01000063.1 RefSeq gene 2664 4622 . - . ID=gene-AD08_RS22595;Name=AD08_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22595;old_locus_tag=AD08_5255 NZ_JHDJ01000063.1 Protein Homology CDS 2664 4622 . - 0 ID=cds-WP_001696680.1;Parent=gene-AD08_RS22595;Dbxref=Genbank:WP_001696680.1;Name=WP_001696680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052657.1;locus_tag=AD08_RS22595;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_001696680.1;transl_table=11 NZ_JHDJ01000063.1 RefSeq gene 4686 4919 . - . ID=gene-AD08_RS22590;Name=AD08_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22590;old_locus_tag=AD08_5256 NZ_JHDJ01000063.1 Protein Homology CDS 4686 4919 . - 0 ID=cds-WP_000005971.1;Parent=gene-AD08_RS22590;Dbxref=Genbank:WP_000005971.1;Name=WP_000005971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958724.1;locus_tag=AD08_RS22590;product=DUF905 domain-containing protein;protein_id=WP_000005971.1;transl_table=11 NZ_JHDJ01000063.1 RefSeq gene 4975 5502 . - . ID=gene-AD08_RS22585;Name=AD08_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22585;old_locus_tag=AD08_5257 NZ_JHDJ01000063.1 Protein Homology CDS 4975 5502 . - 0 ID=cds-WP_000290816.1;Parent=gene-AD08_RS22585;Dbxref=Genbank:WP_000290816.1;Name=WP_000290816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290782.1;locus_tag=AD08_RS22585;product=single-stranded DNA-binding protein;protein_id=WP_000290816.1;transl_table=11 ##sequence-region NZ_JHDJ01000064.1 1 9148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000064.1 RefSeq region 1 9148 . + . ID=NZ_JHDJ01000064.1:1..9148;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000064.1 RefSeq gene 285 1556 . - . ID=gene-AD08_RS27900;Name=AD08_RS27900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS27900;old_locus_tag=AD08_5258 NZ_JHDJ01000064.1 Protein Homology CDS 285 1556 . - 0 ID=cds-WP_071995783.1;Parent=gene-AD08_RS27900;Dbxref=Genbank:WP_071995783.1;Name=WP_071995783.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013130.1;locus_tag=AD08_RS27900;product=hypothetical protein;protein_id=WP_071995783.1;transl_table=11 NZ_JHDJ01000064.1 RefSeq gene 1580 2239 . - . ID=gene-AD08_RS0124690;Name=AD08_RS0124690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124690 NZ_JHDJ01000064.1 Protein Homology CDS 1580 2239 . - 0 ID=cds-WP_148724442.1;Parent=gene-AD08_RS0124690;Dbxref=Genbank:WP_148724442.1;Name=WP_148724442.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013774.1;locus_tag=AD08_RS0124690;product=hypothetical protein;protein_id=WP_148724442.1;transl_table=11 NZ_JHDJ01000064.1 RefSeq gene 2254 2502 . - . ID=gene-AD08_RS30960;Name=AD08_RS30960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30960 NZ_JHDJ01000064.1 Protein Homology CDS 2254 2502 . - 0 ID=cds-WP_071995508.1;Parent=gene-AD08_RS30960;Dbxref=Genbank:WP_071995508.1;Name=WP_071995508.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014744.1;locus_tag=AD08_RS30960;product=hypothetical protein;protein_id=WP_071995508.1;transl_table=11 NZ_JHDJ01000064.1 RefSeq gene 3259 3984 . - . ID=gene-AD08_RS31520;Name=AD08_RS31520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31520;old_locus_tag=AD08_5260 NZ_JHDJ01000064.1 GeneMarkS-2+ CDS 3259 3984 . - 0 ID=cds-WP_148724041.1;Parent=gene-AD08_RS31520;Dbxref=Genbank:WP_148724041.1;Name=WP_148724041.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS31520;product=hypothetical protein;protein_id=WP_148724041.1;transl_table=11 NZ_JHDJ01000064.1 RefSeq gene 4575 8624 . - . ID=gene-AD08_RS30180;Name=AD08_RS30180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30180;old_locus_tag=AD08_5261 NZ_JHDJ01000064.1 Protein Homology CDS 4575 8624 . - 0 ID=cds-WP_162752711.1;Parent=gene-AD08_RS30180;Dbxref=Genbank:WP_162752711.1;Name=WP_162752711.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013746.1%2CHMM:NF020963.1;locus_tag=AD08_RS30180;product=hypothetical protein;protein_id=WP_162752711.1;transl_table=11 NZ_JHDJ01000064.1 RefSeq gene 8578 9148 . - . ID=gene-AD08_RS0124715;Name=AD08_RS0124715;end_range=9148,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124715;partial=true NZ_JHDJ01000064.1 Protein Homology CDS 8578 9148 . - 1 ID=cds-WP_162752712.1;Parent=gene-AD08_RS0124715;Dbxref=Genbank:WP_162752712.1;Name=WP_162752712.1;end_range=9148,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018198.1;locus_tag=AD08_RS0124715;partial=true;product=hypothetical protein;protein_id=WP_162752712.1;transl_table=11 ##sequence-region NZ_JHDJ01000065.1 1 718 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000065.1 RefSeq region 1 718 . + . ID=NZ_JHDJ01000065.1:1..718;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000065.1 RefSeq gene 1 718 . - . ID=gene-AD08_RS22580;Name=AD08_RS22580;end_range=718,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22580;old_locus_tag=AD08_5262;partial=true;start_range=.,1 NZ_JHDJ01000065.1 Protein Homology CDS 1 718 . - 0 ID=cds-WP_032217719.1;Parent=gene-AD08_RS22580;Dbxref=Genbank:WP_032217719.1;Name=WP_032217719.1;end_range=718,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018209.1%2CHMM:NF024487.1;locus_tag=AD08_RS22580;partial=true;product=hypothetical protein;protein_id=WP_032217719.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDJ01000066.1 1 2480 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000066.1 RefSeq region 1 2480 . + . ID=NZ_JHDJ01000066.1:1..2480;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000066.1 RefSeq gene 64 768 . + . ID=gene-AD08_RS22575;Name=AD08_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22575;old_locus_tag=AD08_5263 NZ_JHDJ01000066.1 Protein Homology CDS 64 768 . + 0 ID=cds-WP_001067855.1;Parent=gene-AD08_RS22575;Dbxref=Genbank:WP_001067855.1;Name=WP_001067855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=AD08_RS22575;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_JHDJ01000066.1 RefSeq gene 864 1373 . + . ID=gene-AD08_RS0124720;Name=dfrA8;gbkey=Gene;gene=dfrA8;gene_biotype=protein_coding;locus_tag=AD08_RS0124720 NZ_JHDJ01000066.1 Protein Homology CDS 864 1373 . + 0 ID=cds-WP_000571065.1;Parent=gene-AD08_RS0124720;Dbxref=Genbank:WP_000571065.1;Name=WP_000571065.1;gbkey=CDS;gene=dfrA8;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000571065.1;locus_tag=AD08_RS0124720;product=trimethoprim-resistant dihydrofolate reductase DfrA8;protein_id=WP_000571065.1;transl_table=11 NZ_JHDJ01000066.1 RefSeq gene 1370 2026 . + . ID=gene-AD08_RS0124725;Name=AD08_RS0124725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124725 NZ_JHDJ01000066.1 Protein Homology CDS 1370 2026 . + 0 ID=cds-WP_000144779.1;Parent=gene-AD08_RS0124725;Dbxref=Genbank:WP_000144779.1;Name=WP_000144779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000144779.1;locus_tag=AD08_RS0124725;product=hypothetical protein;protein_id=WP_000144779.1;transl_table=11 NZ_JHDJ01000066.1 RefSeq pseudogene 2063 2480 . + . ID=gene-AD08_RS22570;Name=AD08_RS22570;end_range=2480,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS22570;old_locus_tag=AD08_5267;partial=true;pseudo=true NZ_JHDJ01000066.1 Protein Homology CDS 2063 2480 . + 0 ID=cds-AD08_RS22570;Parent=gene-AD08_RS22570;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2480,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=AD08_RS22570;partial=true;product=IS6-like element IS26 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000067.1 1 300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000067.1 RefSeq region 1 300 . + . ID=NZ_JHDJ01000067.1:1..300;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000067.1 RefSeq gene 116 231 . - . ID=gene-AD08_RS22565;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD08_RS22565;old_locus_tag=AD08_5269 NZ_JHDJ01000067.1 cmsearch rRNA 116 231 . - . ID=rna-AD08_RS22565;Parent=gene-AD08_RS22565;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS22565;product=5S ribosomal RNA NZ_JHDJ01000067.1 cmsearch exon 116 231 . - . ID=exon-AD08_RS22565-1;Parent=rna-AD08_RS22565;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS22565;product=5S ribosomal RNA ##sequence-region NZ_JHDJ01000068.1 1 1899 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000068.1 RefSeq region 1 1899 . + . ID=NZ_JHDJ01000068.1:1..1899;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000068.1 RefSeq gene 259 1446 . - . ID=gene-AD08_RS22560;Name=AD08_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22560;old_locus_tag=AD08_5270 NZ_JHDJ01000068.1 Protein Homology CDS 259 1446 . - 0 ID=cds-WP_032217558.1-2;Parent=gene-AD08_RS22560;Dbxref=Genbank:WP_032217558.1;Name=WP_032217558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013747467.1;locus_tag=AD08_RS22560;product=IS91 family transposase;protein_id=WP_032217558.1;transl_table=11 NZ_JHDJ01000068.1 RefSeq gene 1446 1811 . - . ID=gene-AD08_RS22555;Name=AD08_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22555;old_locus_tag=AD08_5271 NZ_JHDJ01000068.1 GeneMarkS-2+ CDS 1446 1811 . - 0 ID=cds-WP_000124094.1-2;Parent=gene-AD08_RS22555;Dbxref=Genbank:WP_000124094.1;Name=WP_000124094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS22555;product=hypothetical protein;protein_id=WP_000124094.1;transl_table=11 ##sequence-region NZ_JHDJ01000069.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000069.1 RefSeq region 1 2047 . + . ID=NZ_JHDJ01000069.1:1..2047;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000069.1 RefSeq gene 1 990 . - . ID=gene-AD08_RS22550;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=AD08_RS22550;old_locus_tag=AD08_5272;partial=true;start_range=.,1 NZ_JHDJ01000069.1 Protein Homology CDS 1 990 . - 0 ID=cds-WP_032217728.1;Parent=gene-AD08_RS22550;Dbxref=Genbank:WP_032217728.1;Name=WP_032217728.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416549.1;locus_tag=AD08_RS22550;partial=true;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_032217728.1;start_range=.,1;transl_table=11 NZ_JHDJ01000069.1 RefSeq pseudogene 1266 2047 . - . ID=gene-AD08_RS22545;Name=wzxC;end_range=2047,.;gbkey=Gene;gene=wzxC;gene_biotype=pseudogene;locus_tag=AD08_RS22545;old_locus_tag=AD08_5273;partial=true;pseudo=true NZ_JHDJ01000069.1 Protein Homology CDS 1266 2047 . - 2 ID=cds-AD08_RS22545;Parent=gene-AD08_RS22545;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2047,.;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310878.1;locus_tag=AD08_RS22545;partial=true;product=M-antigen undecaprenyl disphosphate flippase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000070.1 1 5083 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000070.1 RefSeq region 1 5083 . + . ID=NZ_JHDJ01000070.1:1..5083;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000070.1 RefSeq gene 1 1068 . + . ID=gene-AD08_RS22540;Name=AD08_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22540;old_locus_tag=AD08_5274;partial=true;start_range=.,1 NZ_JHDJ01000070.1 Protein Homology CDS 1 1068 . + 0 ID=cds-WP_032217610.1-2;Parent=gene-AD08_RS22540;Dbxref=Genbank:WP_032217610.1;Name=WP_032217610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS22540;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032217610.1;start_range=.,1;transl_table=11 NZ_JHDJ01000070.1 RefSeq gene 1269 1478 . + . ID=gene-AD08_RS31525;Name=AD08_RS31525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31525;old_locus_tag=AD08_5275 NZ_JHDJ01000070.1 GeneMarkS-2+ CDS 1269 1478 . + 0 ID=cds-WP_162752713.1;Parent=gene-AD08_RS31525;Dbxref=Genbank:WP_162752713.1;Name=WP_162752713.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS31525;product=hypothetical protein;protein_id=WP_162752713.1;transl_table=11 NZ_JHDJ01000070.1 RefSeq gene 1475 1969 . + . ID=gene-AD08_RS0124730;Name=AD08_RS0124730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124730 NZ_JHDJ01000070.1 Protein Homology CDS 1475 1969 . + 0 ID=cds-WP_012601564.1-2;Parent=gene-AD08_RS0124730;Dbxref=Genbank:WP_012601564.1;Name=WP_012601564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416858.1;locus_tag=AD08_RS0124730;product=PerC family transcriptional regulator;protein_id=WP_012601564.1;transl_table=11 NZ_JHDJ01000070.1 RefSeq gene 1969 2622 . + . ID=gene-AD08_RS22530;Name=AD08_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22530;old_locus_tag=AD08_5277 NZ_JHDJ01000070.1 Protein Homology CDS 1969 2622 . + 0 ID=cds-WP_001409632.1-2;Parent=gene-AD08_RS22530;Dbxref=Genbank:WP_001409632.1;Name=WP_001409632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001378271.1;locus_tag=AD08_RS22530;product=phage N-6-adenine-methyltransferase;protein_id=WP_001409632.1;transl_table=11 NZ_JHDJ01000070.1 RefSeq gene 2619 2945 . + . ID=gene-AD08_RS22525;Name=AD08_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22525;old_locus_tag=AD08_5278 NZ_JHDJ01000070.1 Protein Homology CDS 2619 2945 . + 0 ID=cds-WP_000210152.1-2;Parent=gene-AD08_RS22525;Dbxref=Genbank:WP_000210152.1;Name=WP_000210152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003878599.1;locus_tag=AD08_RS22525;product=LexA family transcriptional regulator;protein_id=WP_000210152.1;transl_table=11 NZ_JHDJ01000070.1 RefSeq gene 2942 3337 . + . ID=gene-AD08_RS22520;Name=AD08_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22520;old_locus_tag=AD08_5279 NZ_JHDJ01000070.1 Protein Homology CDS 2942 3337 . + 0 ID=cds-WP_000767110.1-2;Parent=gene-AD08_RS22520;Dbxref=Genbank:WP_000767110.1;Name=WP_000767110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767123.1;locus_tag=AD08_RS22520;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_000767110.1;transl_table=11 NZ_JHDJ01000070.1 RefSeq gene 3500 4315 . + . ID=gene-AD08_RS22515;Name=AD08_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22515;old_locus_tag=AD08_5280 NZ_JHDJ01000070.1 Protein Homology CDS 3500 4315 . + 0 ID=cds-WP_001072669.1-2;Parent=gene-AD08_RS22515;Dbxref=Genbank:WP_001072669.1;Name=WP_001072669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001072668.1;locus_tag=AD08_RS22515;product=KilA-N domain-containing protein;protein_id=WP_001072669.1;transl_table=11 NZ_JHDJ01000070.1 RefSeq gene 4323 5083 . + . ID=gene-AD08_RS22510;Name=AD08_RS22510;end_range=5083,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22510;old_locus_tag=AD08_5281;partial=true NZ_JHDJ01000070.1 Protein Homology CDS 4323 5083 . + 0 ID=cds-WP_071995804.1;Parent=gene-AD08_RS22510;Dbxref=Genbank:WP_071995804.1;Name=WP_071995804.1;end_range=5083,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764249.1;locus_tag=AD08_RS22510;partial=true;product=DUF968 domain-containing protein;protein_id=WP_071995804.1;transl_table=11 ##sequence-region NZ_JHDJ01000071.1 1 389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000071.1 RefSeq region 1 389 . + . ID=NZ_JHDJ01000071.1:1..389;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000071.1 RefSeq pseudogene 1 142 . + . ID=gene-AD08_RS27920;Name=AD08_RS27920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS27920;old_locus_tag=AD08_5282;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000071.1 Protein Homology CDS 1 142 . + 1 ID=cds-AD08_RS27920;Parent=gene-AD08_RS27920;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537314.1;locus_tag=AD08_RS27920;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000071.1 RefSeq pseudogene 201 389 . + . ID=gene-AD08_RS22505;Name=AD08_RS22505;end_range=389,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS22505;old_locus_tag=AD08_5283;partial=true;pseudo=true NZ_JHDJ01000071.1 GeneMarkS-2+ CDS 201 389 . + 0 ID=cds-AD08_RS22505;Parent=gene-AD08_RS22505;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=389,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS22505;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000072.1 1 2395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000072.1 RefSeq region 1 2395 . + . ID=NZ_JHDJ01000072.1:1..2395;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000072.1 RefSeq gene 1 519 . - . ID=gene-AD08_RS22500;Name=AD08_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22500;old_locus_tag=AD08_5284;partial=true;start_range=.,1 NZ_JHDJ01000072.1 Protein Homology CDS 1 519 . - 0 ID=cds-WP_032217743.1;Parent=gene-AD08_RS22500;Dbxref=Genbank:WP_032217743.1;Name=WP_032217743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309830.1;locus_tag=AD08_RS22500;partial=true;product=phage tail tape measure protein;protein_id=WP_032217743.1;start_range=.,1;transl_table=11 NZ_JHDJ01000072.1 RefSeq gene 567 776 . - . ID=gene-AD08_RS0124735;Name=AD08_RS0124735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124735 NZ_JHDJ01000072.1 Protein Homology CDS 567 776 . - 0 ID=cds-WP_001513217.1-2;Parent=gene-AD08_RS0124735;Dbxref=Genbank:WP_001513217.1;Name=WP_001513217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309578.2;locus_tag=AD08_RS0124735;product=DUF4035 domain-containing protein;protein_id=WP_001513217.1;transl_table=11 NZ_JHDJ01000072.1 RefSeq gene 872 1246 . - . ID=gene-AD08_RS22495;Name=AD08_RS22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22495;old_locus_tag=AD08_5286 NZ_JHDJ01000072.1 Protein Homology CDS 872 1246 . - 0 ID=cds-WP_001030063.1;Parent=gene-AD08_RS22495;Dbxref=Genbank:WP_001030063.1;Name=WP_001030063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309577.1;locus_tag=AD08_RS22495;product=tail assembly protein;protein_id=WP_001030063.1;transl_table=11 NZ_JHDJ01000072.1 RefSeq gene 1252 1968 . - . ID=gene-AD08_RS22490;Name=AD08_RS22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22490;old_locus_tag=AD08_5287 NZ_JHDJ01000072.1 Protein Homology CDS 1252 1968 . - 0 ID=cds-WP_032217745.1;Parent=gene-AD08_RS22490;Dbxref=Genbank:WP_032217745.1;Name=WP_032217745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309576.1;locus_tag=AD08_RS22490;product=tail protein;protein_id=WP_032217745.1;transl_table=11 NZ_JHDJ01000072.1 RefSeq gene 2034 2378 . - . ID=gene-AD08_RS22485;Name=AD08_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22485;old_locus_tag=AD08_5288 NZ_JHDJ01000072.1 Protein Homology CDS 2034 2378 . - 0 ID=cds-WP_000133388.1;Parent=gene-AD08_RS22485;Dbxref=Genbank:WP_000133388.1;Name=WP_000133388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309575.1;locus_tag=AD08_RS22485;product=DUF3168 domain-containing protein;protein_id=WP_000133388.1;transl_table=11 ##sequence-region NZ_JHDJ01000073.1 1 2306 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000073.1 RefSeq region 1 2306 . + . ID=NZ_JHDJ01000073.1:1..2306;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000073.1 RefSeq gene 58 231 . - . ID=gene-AD08_RS31530;Name=AD08_RS31530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31530;old_locus_tag=AD08_5289 NZ_JHDJ01000073.1 GeneMarkS-2+ CDS 58 231 . - 0 ID=cds-WP_021565261.1;Parent=gene-AD08_RS31530;Dbxref=Genbank:WP_021565261.1;Name=WP_021565261.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS31530;product=hypothetical protein;protein_id=WP_021565261.1;transl_table=11 NZ_JHDJ01000073.1 RefSeq gene 236 709 . - . ID=gene-AD08_RS30965;Name=AD08_RS30965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30965;old_locus_tag=AD08_5290 NZ_JHDJ01000073.1 Protein Homology CDS 236 709 . - 0 ID=cds-WP_032217753.1;Parent=gene-AD08_RS30965;Dbxref=Genbank:WP_032217753.1;Name=WP_032217753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232184.1;locus_tag=AD08_RS30965;product=hypothetical protein;protein_id=WP_032217753.1;transl_table=11 NZ_JHDJ01000073.1 RefSeq gene 798 2072 . - . ID=gene-AD08_RS0124740;Name=AD08_RS0124740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124740 NZ_JHDJ01000073.1 Protein Homology CDS 798 2072 . - 0 ID=cds-WP_032217750.1;Parent=gene-AD08_RS0124740;Dbxref=Genbank:WP_032217750.1;Name=WP_032217750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232185.1;locus_tag=AD08_RS0124740;product=YadA C-terminal domain-containing protein;protein_id=WP_032217750.1;transl_table=11 ##sequence-region NZ_JHDJ01000074.1 1 320 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000074.1 RefSeq region 1 320 . + . ID=NZ_JHDJ01000074.1:1..320;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 ##sequence-region NZ_JHDJ01000075.1 1 1954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000075.1 RefSeq region 1 1954 . + . ID=NZ_JHDJ01000075.1:1..1954;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000075.1 RefSeq gene 1 733 . - . ID=gene-AD08_RS22475;Name=AD08_RS22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22475;old_locus_tag=AD08_5292;partial=true;start_range=.,1 NZ_JHDJ01000075.1 Protein Homology CDS 1 733 . - 0 ID=cds-WP_032217762.1;Parent=gene-AD08_RS22475;Dbxref=Genbank:WP_032217762.1;Name=WP_032217762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310762.1;locus_tag=AD08_RS22475;partial=true;product=terminase;protein_id=WP_032217762.1;start_range=.,1;transl_table=11 NZ_JHDJ01000075.1 RefSeq gene 705 1214 . - . ID=gene-AD08_RS22470;Name=AD08_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22470;old_locus_tag=AD08_5293 NZ_JHDJ01000075.1 Protein Homology CDS 705 1214 . - 0 ID=cds-WP_000235436.1;Parent=gene-AD08_RS22470;Dbxref=Genbank:WP_000235436.1;Name=WP_000235436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310763.1;locus_tag=AD08_RS22470;product=terminase;protein_id=WP_000235436.1;transl_table=11 NZ_JHDJ01000075.1 RefSeq gene 1663 1954 . - . ID=gene-AD08_RS30200;Name=AD08_RS30200;end_range=1954,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30200;old_locus_tag=AD08_5295;partial=true NZ_JHDJ01000075.1 Protein Homology CDS 1663 1954 . - 1 ID=cds-WP_032217760.1;Parent=gene-AD08_RS30200;Dbxref=Genbank:WP_032217760.1;Name=WP_032217760.1;end_range=1954,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309813.1;locus_tag=AD08_RS30200;partial=true;product=lysis protein;protein_id=WP_032217760.1;transl_table=11 ##sequence-region NZ_JHDJ01000076.1 1 583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000076.1 RefSeq region 1 583 . + . ID=NZ_JHDJ01000076.1:1..583;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000076.1 RefSeq pseudogene 1 270 . + . ID=gene-AD08_RS22460;Name=AD08_RS22460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS22460;old_locus_tag=AD08_5296;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000076.1 Protein Homology CDS 1 270 . + 0 ID=cds-AD08_RS22460;Parent=gene-AD08_RS22460;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS22460;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDJ01000077.1 1 22145 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000077.1 RefSeq region 1 22145 . + . ID=NZ_JHDJ01000077.1:1..22145;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000077.1 RefSeq gene 1 980 . - . ID=gene-AD08_RS22455;Name=AD08_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22455;old_locus_tag=AD08_5297;partial=true;start_range=.,1 NZ_JHDJ01000077.1 Protein Homology CDS 1 980 . - 0 ID=cds-WP_032217646.1-2;Parent=gene-AD08_RS22455;Dbxref=Genbank:WP_032217646.1;Name=WP_032217646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000218373.1;locus_tag=AD08_RS22455;partial=true;product=tail fiber protein;protein_id=WP_032217646.1;start_range=.,1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 1131 1730 . - . ID=gene-AD08_RS22450;Name=AD08_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22450;old_locus_tag=AD08_5299 NZ_JHDJ01000077.1 Protein Homology CDS 1131 1730 . - 0 ID=cds-WP_032217644.1-2;Parent=gene-AD08_RS22450;Dbxref=Genbank:WP_032217644.1;Name=WP_032217644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308870.1;locus_tag=AD08_RS22450;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_032217644.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 1798 5271 . - . ID=gene-AD08_RS22445;Name=AD08_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22445;old_locus_tag=AD08_5300 NZ_JHDJ01000077.1 Protein Homology CDS 1798 5271 . - 0 ID=cds-WP_032217767.1;Parent=gene-AD08_RS22445;Dbxref=Genbank:WP_032217767.1;Name=WP_032217767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309148.1;locus_tag=AD08_RS22445;product=host specificity protein J;protein_id=WP_032217767.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 5613 6245 . - . ID=gene-AD08_RS22440;Name=AD08_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22440;old_locus_tag=AD08_5301 NZ_JHDJ01000077.1 Protein Homology CDS 5613 6245 . - 0 ID=cds-WP_141068940.1;Parent=gene-AD08_RS22440;Dbxref=Genbank:WP_141068940.1;Name=WP_141068940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188718.1;locus_tag=AD08_RS22440;product=tail assembly protein;protein_id=WP_141068940.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 6191 6934 . - . ID=gene-AD08_RS22435;Name=AD08_RS22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22435;old_locus_tag=AD08_5302 NZ_JHDJ01000077.1 Protein Homology CDS 6191 6934 . - 0 ID=cds-WP_032217771.1;Parent=gene-AD08_RS22435;Dbxref=Genbank:WP_032217771.1;Name=WP_032217771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310264.2;locus_tag=AD08_RS22435;product=phage tail protein;protein_id=WP_032217771.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 6940 7638 . - . ID=gene-AD08_RS22430;Name=AD08_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22430;old_locus_tag=AD08_5303 NZ_JHDJ01000077.1 Protein Homology CDS 6940 7638 . - 0 ID=cds-WP_032217772.1;Parent=gene-AD08_RS22430;Dbxref=Genbank:WP_032217772.1;Name=WP_032217772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310012.1;locus_tag=AD08_RS22430;product=phage minor tail protein L;protein_id=WP_032217772.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 7638 7967 . - . ID=gene-AD08_RS22425;Name=AD08_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22425;old_locus_tag=AD08_5304 NZ_JHDJ01000077.1 Protein Homology CDS 7638 7967 . - 0 ID=cds-WP_000847280.1;Parent=gene-AD08_RS22425;Dbxref=Genbank:WP_000847280.1;Name=WP_000847280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310192.1;locus_tag=AD08_RS22425;product=phage tail protein;protein_id=WP_000847280.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq pseudogene 7964 10538 . - . ID=gene-AD08_RS22420;Name=AD08_RS22420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS22420;old_locus_tag=AD08_5306;pseudo=true NZ_JHDJ01000077.1 Protein Homology CDS 7964 10538 . - 0 ID=cds-AD08_RS22420;Parent=gene-AD08_RS22420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309141.1;locus_tag=AD08_RS22420;product=phage tail tape measure protein;pseudo=true;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 10519 10932 . - . ID=gene-AD08_RS22415;Name=AD08_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22415;old_locus_tag=AD08_5307 NZ_JHDJ01000077.1 Protein Homology CDS 10519 10932 . - 0 ID=cds-WP_071827121.1;Parent=gene-AD08_RS22415;Dbxref=Genbank:WP_071827121.1;Name=WP_071827121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309140.2;locus_tag=AD08_RS22415;product=phage tail assembly protein T;protein_id=WP_071827121.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 10959 11390 . - . ID=gene-AD08_RS22410;Name=AD08_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22410;old_locus_tag=AD08_5308 NZ_JHDJ01000077.1 Protein Homology CDS 10959 11390 . - 0 ID=cds-WP_032217777.1;Parent=gene-AD08_RS22410;Dbxref=Genbank:WP_032217777.1;Name=WP_032217777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310755.1;locus_tag=AD08_RS22410;product=phage minor tail protein G;protein_id=WP_032217777.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 11412 12158 . - . ID=gene-AD08_RS22405;Name=AD08_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22405;old_locus_tag=AD08_5309 NZ_JHDJ01000077.1 Protein Homology CDS 11412 12158 . - 0 ID=cds-WP_032217778.1;Parent=gene-AD08_RS22405;Dbxref=Genbank:WP_032217778.1;Name=WP_032217778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625275.1;locus_tag=AD08_RS22405;product=phage tail protein;protein_id=WP_032217778.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 12166 12561 . - . ID=gene-AD08_RS22400;Name=AD08_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22400;old_locus_tag=AD08_5310 NZ_JHDJ01000077.1 Protein Homology CDS 12166 12561 . - 0 ID=cds-WP_000683079.1;Parent=gene-AD08_RS22400;Dbxref=Genbank:WP_000683079.1;Name=WP_000683079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310197.1;locus_tag=AD08_RS22400;product=tail protein;protein_id=WP_000683079.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 12558 13091 . - . ID=gene-AD08_RS22395;Name=AD08_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22395;old_locus_tag=AD08_5311 NZ_JHDJ01000077.1 Protein Homology CDS 12558 13091 . - 0 ID=cds-WP_000975007.1;Parent=gene-AD08_RS22395;Dbxref=Genbank:WP_000975007.1;Name=WP_000975007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310198.1;locus_tag=AD08_RS22395;product=phage tail protein;protein_id=WP_000975007.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 13107 13460 . - . ID=gene-AD08_RS22390;Name=AD08_RS22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22390;old_locus_tag=AD08_5312 NZ_JHDJ01000077.1 Protein Homology CDS 13107 13460 . - 0 ID=cds-WP_001204533.1;Parent=gene-AD08_RS22390;Dbxref=Genbank:WP_001204533.1;Name=WP_001204533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001204533.1;locus_tag=AD08_RS22390;product=tail attachment protein;protein_id=WP_001204533.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 13453 13836 . - . ID=gene-AD08_RS22385;Name=AD08_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22385;old_locus_tag=AD08_5313 NZ_JHDJ01000077.1 Protein Homology CDS 13453 13836 . - 0 ID=cds-WP_000201501.1;Parent=gene-AD08_RS22385;Dbxref=Genbank:WP_000201501.1;Name=WP_000201501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373367.1;locus_tag=AD08_RS22385;product=DNA-packaging protein FI;protein_id=WP_000201501.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 13888 14916 . - . ID=gene-AD08_RS22380;Name=AD08_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22380;old_locus_tag=AD08_5314 NZ_JHDJ01000077.1 Protein Homology CDS 13888 14916 . - 0 ID=cds-WP_000522624.1;Parent=gene-AD08_RS22380;Dbxref=Genbank:WP_000522624.1;Name=WP_000522624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706633.1;locus_tag=AD08_RS22380;product=major capsid protein;protein_id=WP_000522624.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 14974 15321 . - . ID=gene-AD08_RS22375;Name=AD08_RS22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22375;old_locus_tag=AD08_5315 NZ_JHDJ01000077.1 Protein Homology CDS 14974 15321 . - 0 ID=cds-WP_000256795.1;Parent=gene-AD08_RS22375;Dbxref=Genbank:WP_000256795.1;Name=WP_000256795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309136.1;locus_tag=AD08_RS22375;product=head decoration protein;protein_id=WP_000256795.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 15358 16863 . - . ID=gene-AD08_RS22370;Name=AD08_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22370;old_locus_tag=AD08_5316 NZ_JHDJ01000077.1 Protein Homology CDS 15358 16863 . - 0 ID=cds-WP_032217782.1;Parent=gene-AD08_RS22370;Dbxref=Genbank:WP_032217782.1;Name=WP_032217782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309135.1;locus_tag=AD08_RS22370;product=S49 family peptidase;protein_id=WP_032217782.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 16853 18445 . - . ID=gene-AD08_RS22365;Name=AD08_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22365;old_locus_tag=AD08_5317 NZ_JHDJ01000077.1 Protein Homology CDS 16853 18445 . - 0 ID=cds-WP_001441018.1;Parent=gene-AD08_RS22365;Dbxref=Genbank:WP_001441018.1;Name=WP_001441018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309134.1;locus_tag=AD08_RS22365;product=phage portal protein;protein_id=WP_001441018.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 18442 18648 . - . ID=gene-AD08_RS22360;Name=AD08_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22360;old_locus_tag=AD08_5318 NZ_JHDJ01000077.1 Protein Homology CDS 18442 18648 . - 0 ID=cds-WP_032217785.1;Parent=gene-AD08_RS22360;Dbxref=Genbank:WP_032217785.1;Name=WP_032217785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310761.1;locus_tag=AD08_RS22360;product=head-tail joining protein;protein_id=WP_032217785.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 18632 20560 . - . ID=gene-AD08_RS22355;Name=AD08_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22355;old_locus_tag=AD08_5319 NZ_JHDJ01000077.1 Protein Homology CDS 18632 20560 . - 0 ID=cds-WP_032217787.1;Parent=gene-AD08_RS22355;Dbxref=Genbank:WP_032217787.1;Name=WP_032217787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310762.1;locus_tag=AD08_RS22355;product=phage terminase large subunit family protein;protein_id=WP_032217787.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 20532 21041 . - . ID=gene-AD08_RS22350;Name=AD08_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22350;old_locus_tag=AD08_5320 NZ_JHDJ01000077.1 Protein Homology CDS 20532 21041 . - 0 ID=cds-WP_000235436.1-2;Parent=gene-AD08_RS22350;Dbxref=Genbank:WP_000235436.1;Name=WP_000235436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310763.1;locus_tag=AD08_RS22350;product=terminase;protein_id=WP_000235436.1;transl_table=11 NZ_JHDJ01000077.1 RefSeq gene 21666 21851 . - . ID=gene-AD08_RS31535;Name=AD08_RS31535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31535 NZ_JHDJ01000077.1 Protein Homology CDS 21666 21851 . - 0 ID=cds-WP_032217790.1-2;Parent=gene-AD08_RS31535;Dbxref=Genbank:WP_032217790.1;Name=WP_032217790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309814.1;locus_tag=AD08_RS31535;product=membrane protein;protein_id=WP_032217790.1;transl_table=11 ##sequence-region NZ_JHDJ01000078.1 1 3270 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000078.1 RefSeq region 1 3270 . + . ID=NZ_JHDJ01000078.1:1..3270;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000078.1 RefSeq pseudogene 1 295 . + . ID=gene-AD08_RS22345;Name=AD08_RS22345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS22345;old_locus_tag=AD08_5323;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000078.1 Protein Homology CDS 1 295 . + 1 ID=cds-AD08_RS22345;Parent=gene-AD08_RS22345;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS22345;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000078.1 RefSeq gene 766 1599 . - . ID=gene-AD08_RS22340;Name=AD08_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22340;old_locus_tag=AD08_5325 NZ_JHDJ01000078.1 Protein Homology CDS 766 1599 . - 0 ID=cds-WP_050436503.1;Parent=gene-AD08_RS22340;Dbxref=Genbank:WP_050436503.1;Name=WP_050436503.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.1;locus_tag=AD08_RS22340;product=helix-turn-helix domain-containing protein;protein_id=WP_050436503.1;transl_table=11 NZ_JHDJ01000078.1 RefSeq pseudogene 2005 2811 . - . ID=gene-AD08_RS22335;Name=AD08_RS22335;end_range=2811,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS22335;old_locus_tag=AD08_5326;partial=true;pseudo=true;start_range=.,2005 NZ_JHDJ01000078.1 Protein Homology CDS 2005 2811 . - 0 ID=cds-AD08_RS22335;Parent=gene-AD08_RS22335;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2811,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_063945310.1;locus_tag=AD08_RS22335;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,2005;transl_table=11 NZ_JHDJ01000078.1 RefSeq pseudogene 2822 2917 . + . ID=gene-AD08_RS30210;Name=AD08_RS30210;end_range=2917,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30210;partial=true;pseudo=true NZ_JHDJ01000078.1 Protein Homology CDS 2822 2917 . + 0 ID=cds-AD08_RS30210;Parent=gene-AD08_RS30210;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2917,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213759.1;locus_tag=AD08_RS30210;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_JHDJ01000078.1 RefSeq gene 2956 3270 . - . ID=gene-AD08_RS22330;Name=AD08_RS22330;end_range=3270,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22330;old_locus_tag=AD08_5327;partial=true NZ_JHDJ01000078.1 Protein Homology CDS 2956 3270 . - 0 ID=cds-WP_131199872.1;Parent=gene-AD08_RS22330;Dbxref=Genbank:WP_131199872.1;Name=WP_131199872.1;end_range=3270,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AD08_RS22330;partial=true;product=transposase;protein_id=WP_131199872.1;transl_table=11 ##sequence-region NZ_JHDJ01000079.1 1 417 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000079.1 RefSeq region 1 417 . + . ID=NZ_JHDJ01000079.1:1..417;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000079.1 RefSeq pseudogene 1 417 . - . ID=gene-AD08_RS22325;Name=AD08_RS22325;end_range=417,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS22325;old_locus_tag=AD08_5328;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000079.1 Protein Homology CDS 1 417 . - 2 ID=cds-AD08_RS22325;Parent=gene-AD08_RS22325;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=417,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308756.1;locus_tag=AD08_RS22325;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDJ01000080.1 1 972 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000080.1 RefSeq region 1 972 . + . ID=NZ_JHDJ01000080.1:1..972;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000080.1 RefSeq gene 386 462 . + . ID=gene-AD08_RS22320;Name=AD08_RS22320;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS22320;old_locus_tag=AD08_5329 NZ_JHDJ01000080.1 tRNAscan-SE tRNA 386 462 . + . ID=rna-AD08_RS22320;Parent=gene-AD08_RS22320;anticodon=(pos:420..422);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22320;product=tRNA-Met NZ_JHDJ01000080.1 tRNAscan-SE exon 386 462 . + . ID=exon-AD08_RS22320-1;Parent=rna-AD08_RS22320;anticodon=(pos:420..422);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22320;product=tRNA-Met NZ_JHDJ01000080.1 RefSeq gene 472 556 . + . ID=gene-AD08_RS22315;Name=AD08_RS22315;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS22315;old_locus_tag=AD08_5330 NZ_JHDJ01000080.1 tRNAscan-SE tRNA 472 556 . + . ID=rna-AD08_RS22315;Parent=gene-AD08_RS22315;anticodon=(pos:506..508);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22315;product=tRNA-Leu NZ_JHDJ01000080.1 tRNAscan-SE exon 472 556 . + . ID=exon-AD08_RS22315-1;Parent=rna-AD08_RS22315;anticodon=(pos:506..508);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22315;product=tRNA-Leu NZ_JHDJ01000080.1 RefSeq gene 580 654 . + . ID=gene-AD08_RS22310;Name=AD08_RS22310;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS22310;old_locus_tag=AD08_5331 NZ_JHDJ01000080.1 tRNAscan-SE tRNA 580 654 . + . ID=rna-AD08_RS22310;Parent=gene-AD08_RS22310;anticodon=(pos:612..614);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22310;product=tRNA-Gln NZ_JHDJ01000080.1 tRNAscan-SE exon 580 654 . + . ID=exon-AD08_RS22310-1;Parent=rna-AD08_RS22310;anticodon=(pos:612..614);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22310;product=tRNA-Gln NZ_JHDJ01000080.1 RefSeq gene 670 746 . + . ID=gene-AD08_RS22305;Name=AD08_RS22305;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS22305;old_locus_tag=AD08_5332 NZ_JHDJ01000080.1 tRNAscan-SE tRNA 670 746 . + . ID=rna-AD08_RS22305;Parent=gene-AD08_RS22305;anticodon=(pos:704..706);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22305;product=tRNA-Met NZ_JHDJ01000080.1 tRNAscan-SE exon 670 746 . + . ID=exon-AD08_RS22305-1;Parent=rna-AD08_RS22305;anticodon=(pos:704..706);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22305;product=tRNA-Met NZ_JHDJ01000080.1 RefSeq gene 794 868 . + . ID=gene-AD08_RS22300;Name=AD08_RS22300;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS22300;old_locus_tag=AD08_5333 NZ_JHDJ01000080.1 tRNAscan-SE tRNA 794 868 . + . ID=rna-AD08_RS22300;Parent=gene-AD08_RS22300;anticodon=(pos:826..828);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22300;product=tRNA-Gln NZ_JHDJ01000080.1 tRNAscan-SE exon 794 868 . + . ID=exon-AD08_RS22300-1;Parent=rna-AD08_RS22300;anticodon=(pos:826..828);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22300;product=tRNA-Gln ##sequence-region NZ_JHDJ01000081.1 1 8379 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000081.1 RefSeq region 1 8379 . + . ID=NZ_JHDJ01000081.1:1..8379;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000081.1 RefSeq gene 1 1335 . - . ID=gene-AD08_RS22290;Name=AD08_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22290;old_locus_tag=AD08_5335;partial=true;start_range=.,1 NZ_JHDJ01000081.1 Protein Homology CDS 1 1335 . - 0 ID=cds-WP_032171013.1-2;Parent=gene-AD08_RS22290;Dbxref=Genbank:WP_032171013.1;Name=WP_032171013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AD08_RS22290;partial=true;product=IS4-like element IS4 family transposase;protein_id=WP_032171013.1;start_range=.,1;transl_table=11 NZ_JHDJ01000081.1 RefSeq gene 1436 2995 . - . ID=gene-AD08_RS22285;Name=AD08_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22285;old_locus_tag=AD08_5336 NZ_JHDJ01000081.1 Protein Homology CDS 1436 2995 . - 0 ID=cds-WP_001774097.1;Parent=gene-AD08_RS22285;Dbxref=Genbank:WP_001774097.1;Name=WP_001774097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774097.1;locus_tag=AD08_RS22285;product=hypothetical protein;protein_id=WP_001774097.1;transl_table=11 NZ_JHDJ01000081.1 RefSeq gene 3089 3640 . - . ID=gene-AD08_RS0124755;Name=AD08_RS0124755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124755 NZ_JHDJ01000081.1 Protein Homology CDS 3089 3640 . - 0 ID=cds-WP_001774096.1;Parent=gene-AD08_RS0124755;Dbxref=Genbank:WP_001774096.1;Name=WP_001774096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774096.1;locus_tag=AD08_RS0124755;product=3'-5' exoribonuclease;protein_id=WP_001774096.1;transl_table=11 NZ_JHDJ01000081.1 RefSeq gene 3819 6095 . - . ID=gene-AD08_RS22280;Name=AD08_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22280;old_locus_tag=AD08_5337 NZ_JHDJ01000081.1 Protein Homology CDS 3819 6095 . - 0 ID=cds-WP_032217811.1;Parent=gene-AD08_RS22280;Dbxref=Genbank:WP_032217811.1;Name=WP_032217811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774095.1;locus_tag=AD08_RS22280;product=replication endonuclease;protein_id=WP_032217811.1;transl_table=11 NZ_JHDJ01000081.1 RefSeq gene 6085 6360 . - . ID=gene-AD08_RS22275;Name=AD08_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22275;old_locus_tag=AD08_5338 NZ_JHDJ01000081.1 Protein Homology CDS 6085 6360 . - 0 ID=cds-WP_000027664.1;Parent=gene-AD08_RS22275;Dbxref=Genbank:WP_000027664.1;Name=WP_000027664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027668.1;locus_tag=AD08_RS22275;product=DUF5405 family protein;protein_id=WP_000027664.1;transl_table=11 NZ_JHDJ01000081.1 RefSeq gene 6357 6581 . - . ID=gene-AD08_RS22270;Name=AD08_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22270;old_locus_tag=AD08_5339 NZ_JHDJ01000081.1 Protein Homology CDS 6357 6581 . - 0 ID=cds-WP_032217814.1;Parent=gene-AD08_RS22270;Dbxref=Genbank:WP_032217814.1;Name=WP_032217814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242005.1;locus_tag=AD08_RS22270;product=TraR/DksA family transcriptional regulator;protein_id=WP_032217814.1;transl_table=11 NZ_JHDJ01000081.1 RefSeq gene 6584 6883 . - . ID=gene-AD08_RS22265;Name=AD08_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22265;old_locus_tag=AD08_5340 NZ_JHDJ01000081.1 Protein Homology CDS 6584 6883 . - 0 ID=cds-WP_001277891.1;Parent=gene-AD08_RS22265;Dbxref=Genbank:WP_001277891.1;Name=WP_001277891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277891.1;locus_tag=AD08_RS22265;product=DUF5405 family protein;protein_id=WP_001277891.1;transl_table=11 NZ_JHDJ01000081.1 RefSeq gene 6883 7107 . - . ID=gene-AD08_RS22260;Name=AD08_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22260;old_locus_tag=AD08_5341 NZ_JHDJ01000081.1 Protein Homology CDS 6883 7107 . - 0 ID=cds-WP_000557703.1;Parent=gene-AD08_RS22260;Dbxref=Genbank:WP_000557703.1;Name=WP_000557703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236090.1;locus_tag=AD08_RS22260;product=DUF2732 family protein;protein_id=WP_000557703.1;transl_table=11 NZ_JHDJ01000081.1 RefSeq gene 7171 7671 . - . ID=gene-AD08_RS22255;Name=AD08_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22255;old_locus_tag=AD08_5342 NZ_JHDJ01000081.1 Protein Homology CDS 7171 7671 . - 0 ID=cds-WP_032217817.1;Parent=gene-AD08_RS22255;Dbxref=Genbank:WP_032217817.1;Name=WP_032217817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441883.1;locus_tag=AD08_RS22255;product=hypothetical protein;protein_id=WP_032217817.1;transl_table=11 NZ_JHDJ01000081.1 RefSeq pseudogene 7841 8002 . - . ID=gene-AD08_RS27950;Name=AD08_RS27950;end_range=8002,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS27950;partial=true;pseudo=true NZ_JHDJ01000081.1 Protein Homology CDS 7841 8002 . - 0 ID=cds-AD08_RS27950;Parent=gene-AD08_RS27950;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=8002,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007369289.1;locus_tag=AD08_RS27950;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDJ01000081.1 RefSeq gene 8062 8379 . + . ID=gene-AD08_RS22245;Name=AD08_RS22245;end_range=8379,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22245;old_locus_tag=AD08_5344;partial=true NZ_JHDJ01000081.1 Protein Homology CDS 8062 8379 . + 0 ID=cds-WP_032217820.1;Parent=gene-AD08_RS22245;Dbxref=Genbank:WP_032217820.1;Name=WP_032217820.1;end_range=8379,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS22245;partial=true;product=transposase;protein_id=WP_032217820.1;transl_table=11 ##sequence-region NZ_JHDJ01000082.1 1 316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000082.1 RefSeq region 1 316 . + . ID=NZ_JHDJ01000082.1:1..316;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 ##sequence-region NZ_JHDJ01000083.1 1 1417 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000083.1 RefSeq region 1 1417 . + . ID=NZ_JHDJ01000083.1:1..1417;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000083.1 RefSeq gene 64 588 . + . ID=gene-AD08_RS27955;Name=AD08_RS27955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS27955;old_locus_tag=AD08_5346 NZ_JHDJ01000083.1 Protein Homology CDS 64 588 . + 0 ID=cds-WP_071995806.1;Parent=gene-AD08_RS27955;Dbxref=Genbank:WP_071995806.1;Name=WP_071995806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=AD08_RS27955;product=IS6 family transposase;protein_id=WP_071995806.1;transl_table=11 NZ_JHDJ01000083.1 RefSeq pseudogene 534 755 . - . ID=gene-AD08_RS0124770;Name=AD08_RS0124770;end_range=755,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0124770;partial=true;pseudo=true NZ_JHDJ01000083.1 Protein Homology CDS 534 755 . - 0 ID=cds-AD08_RS0124770;Parent=gene-AD08_RS0124770;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=755,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=AD08_RS0124770;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_JHDJ01000083.1 RefSeq gene 798 992 . - . ID=gene-AD08_RS22240;Name=AD08_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22240;old_locus_tag=AD08_5347 NZ_JHDJ01000083.1 Protein Homology CDS 798 992 . - 0 ID=cds-WP_000568662.1;Parent=gene-AD08_RS22240;Dbxref=Genbank:WP_000568662.1;Name=WP_000568662.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024997.1;locus_tag=AD08_RS22240;product=DDE-type integrase/transposase/recombinase;protein_id=WP_000568662.1;transl_table=11 NZ_JHDJ01000083.1 RefSeq pseudogene 1062 1417 . - . ID=gene-AD08_RS22235;Name=AD08_RS22235;end_range=1417,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS22235;old_locus_tag=AD08_5348;partial=true;pseudo=true NZ_JHDJ01000083.1 Protein Homology CDS 1062 1417 . - 2 ID=cds-AD08_RS22235;Parent=gene-AD08_RS22235;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1417,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=AD08_RS22235;partial=true;product=IS6-like element IS26 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000084.1 1 6325 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000084.1 RefSeq region 1 6325 . + . ID=NZ_JHDJ01000084.1:1..6325;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000084.1 RefSeq gene 1 1010 . - . ID=gene-AD08_RS22230;Name=AD08_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22230;old_locus_tag=AD08_5349;partial=true;start_range=.,1 NZ_JHDJ01000084.1 Protein Homology CDS 1 1010 . - 0 ID=cds-WP_032217838.1;Parent=gene-AD08_RS22230;Dbxref=Genbank:WP_032217838.1;Name=WP_032217838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309571.1;locus_tag=AD08_RS22230;partial=true;product=phage portal protein;protein_id=WP_032217838.1;start_range=.,1;transl_table=11 NZ_JHDJ01000084.1 RefSeq gene 956 1177 . - . ID=gene-AD08_RS0124775;Name=AD08_RS0124775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124775 NZ_JHDJ01000084.1 Protein Homology CDS 956 1177 . - 0 ID=cds-WP_032217834.1;Parent=gene-AD08_RS0124775;Dbxref=Genbank:WP_032217834.1;Name=WP_032217834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502610.1;locus_tag=AD08_RS0124775;product=hypothetical protein;protein_id=WP_032217834.1;transl_table=11 NZ_JHDJ01000084.1 RefSeq gene 1222 3159 . - . ID=gene-AD08_RS22225;Name=AD08_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22225;old_locus_tag=AD08_5350 NZ_JHDJ01000084.1 Protein Homology CDS 1222 3159 . - 0 ID=cds-WP_000173031.1;Parent=gene-AD08_RS22225;Dbxref=Genbank:WP_000173031.1;Name=WP_000173031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309570.1;locus_tag=AD08_RS22225;product=phage major capsid protein;protein_id=WP_000173031.1;transl_table=11 NZ_JHDJ01000084.1 RefSeq gene 3223 4884 . - . ID=gene-AD08_RS22220;Name=AD08_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22220;old_locus_tag=AD08_5351 NZ_JHDJ01000084.1 Protein Homology CDS 3223 4884 . - 0 ID=cds-WP_032217836.1;Parent=gene-AD08_RS22220;Dbxref=Genbank:WP_032217836.1;Name=WP_032217836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309569.1;locus_tag=AD08_RS22220;product=terminase large subunit;protein_id=WP_032217836.1;transl_table=11 NZ_JHDJ01000084.1 RefSeq gene 4881 5444 . - . ID=gene-AD08_RS22215;Name=AD08_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22215;old_locus_tag=AD08_5352 NZ_JHDJ01000084.1 Protein Homology CDS 4881 5444 . - 0 ID=cds-WP_001530008.1;Parent=gene-AD08_RS22215;Dbxref=Genbank:WP_001530008.1;Name=WP_001530008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309568.1;locus_tag=AD08_RS22215;product=terminase small subunit;protein_id=WP_001530008.1;transl_table=11 NZ_JHDJ01000084.1 RefSeq gene 5735 6100 . - . ID=gene-AD08_RS22210;Name=AD08_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22210;old_locus_tag=AD08_5353 NZ_JHDJ01000084.1 Protein Homology CDS 5735 6100 . - 0 ID=cds-WP_000829187.1;Parent=gene-AD08_RS22210;Dbxref=Genbank:WP_000829187.1;Name=WP_000829187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309567.1;locus_tag=AD08_RS22210;product=HNH endonuclease;protein_id=WP_000829187.1;transl_table=11 NZ_JHDJ01000084.1 RefSeq gene 6142 6325 . + . ID=gene-AD08_RS22205;Name=AD08_RS22205;end_range=6325,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22205;old_locus_tag=AD08_5354;partial=true NZ_JHDJ01000084.1 Protein Homology CDS 6142 6325 . + 0 ID=cds-WP_032188906.1;Parent=gene-AD08_RS22205;Dbxref=Genbank:WP_032188906.1;Name=WP_032188906.1;end_range=6325,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588454.1;locus_tag=AD08_RS22205;partial=true;product=YlcI/YnfO family protein;protein_id=WP_032188906.1;transl_table=11 ##sequence-region NZ_JHDJ01000085.1 1 1959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000085.1 RefSeq region 1 1959 . + . ID=NZ_JHDJ01000085.1:1..1959;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000085.1 RefSeq gene 197 1318 . + . ID=gene-AD08_RS22200;Name=AD08_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22200;old_locus_tag=AD08_5355 NZ_JHDJ01000085.1 Protein Homology CDS 197 1318 . + 0 ID=cds-WP_032217843.1;Parent=gene-AD08_RS22200;Dbxref=Genbank:WP_032217843.1;Name=WP_032217843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537314.1;locus_tag=AD08_RS22200;product=YadA C-terminal domain-containing protein;protein_id=WP_032217843.1;transl_table=11 NZ_JHDJ01000085.1 RefSeq gene 1407 1880 . + . ID=gene-AD08_RS22195;Name=AD08_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22195;old_locus_tag=AD08_5356 NZ_JHDJ01000085.1 Protein Homology CDS 1407 1880 . + 0 ID=cds-WP_032217845.1;Parent=gene-AD08_RS22195;Dbxref=Genbank:WP_032217845.1;Name=WP_032217845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232184.1;locus_tag=AD08_RS22195;product=hypothetical protein;protein_id=WP_032217845.1;transl_table=11 ##sequence-region NZ_JHDJ01000086.1 1 3597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000086.1 RefSeq region 1 3597 . + . ID=NZ_JHDJ01000086.1:1..3597;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000086.1 RefSeq pseudogene 1 193 . - . ID=gene-AD08_RS22190;Name=AD08_RS22190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS22190;old_locus_tag=AD08_5358;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000086.1 Protein Homology CDS 1 193 . - 0 ID=cds-AD08_RS22190;Parent=gene-AD08_RS22190;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418588.1;locus_tag=AD08_RS22190;partial=true;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000086.1 RefSeq gene 192 1331 . + . ID=gene-AD08_RS22185;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AD08_RS22185;old_locus_tag=AD08_5359 NZ_JHDJ01000086.1 Protein Homology CDS 192 1331 . + 0 ID=cds-WP_001294219.1-2;Parent=gene-AD08_RS22185;Dbxref=Genbank:WP_001294219.1;Name=WP_001294219.1;gbkey=CDS;gene=queG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=AD08_RS22185;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001294219.1;transl_table=11 NZ_JHDJ01000086.1 RefSeq gene 1314 1367 . - . ID=gene-AD08_RS30980;Name=AD08_RS30980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30980 NZ_JHDJ01000086.1 Protein Homology CDS 1314 1367 . - 0 ID=cds-WP_010723271.1-2;Parent=gene-AD08_RS30980;Dbxref=Genbank:WP_010723271.1;Name=WP_010723271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791261.1;locus_tag=AD08_RS30980;product=hypothetical protein;protein_id=WP_010723271.1;transl_table=11 NZ_JHDJ01000086.1 RefSeq gene 1601 1676 . - . ID=gene-AD08_RS22180;Name=AD08_RS22180;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS22180;old_locus_tag=AD08_5360 NZ_JHDJ01000086.1 tRNAscan-SE tRNA 1601 1676 . - . ID=rna-AD08_RS22180;Parent=gene-AD08_RS22180;anticodon=(pos:complement(1641..1643));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22180;product=tRNA-Gly NZ_JHDJ01000086.1 tRNAscan-SE exon 1601 1676 . - . ID=exon-AD08_RS22180-1;Parent=rna-AD08_RS22180;anticodon=(pos:complement(1641..1643));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS22180;product=tRNA-Gly NZ_JHDJ01000086.1 RefSeq gene 1887 2432 . - . ID=gene-AD08_RS22175;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AD08_RS22175;old_locus_tag=AD08_5361 NZ_JHDJ01000086.1 Protein Homology CDS 1887 2432 . - 0 ID=cds-WP_001295188.1-2;Parent=gene-AD08_RS22175;Dbxref=Genbank:WP_001295188.1;Name=WP_001295188.1;gbkey=CDS;gene=orn;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418586.4;locus_tag=AD08_RS22175;product=oligoribonuclease;protein_id=WP_001295188.1;transl_table=11 NZ_JHDJ01000086.1 RefSeq gene 2527 3579 . + . ID=gene-AD08_RS22170;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AD08_RS22170;old_locus_tag=AD08_5362 NZ_JHDJ01000086.1 Protein Homology CDS 2527 3579 . + 0 ID=cds-WP_000041964.1;Parent=gene-AD08_RS22170;Dbxref=Genbank:WP_000041964.1;Name=WP_000041964.1;gbkey=CDS;gene=rsgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418585.4;locus_tag=AD08_RS22170;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041964.1;transl_table=11 ##sequence-region NZ_JHDJ01000087.1 1 1716 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000087.1 RefSeq region 1 1716 . + . ID=NZ_JHDJ01000087.1:1..1716;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000087.1 RefSeq pseudogene 1 418 . - . ID=gene-AD08_RS22165;Name=AD08_RS22165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS22165;old_locus_tag=AD08_5363;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000087.1 Protein Homology CDS 1 418 . - 0 ID=cds-AD08_RS22165;Parent=gene-AD08_RS22165;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005221000.1;locus_tag=AD08_RS22165;partial=true;product=IS6-like element IS26 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000087.1 RefSeq gene 709 1569 . + . ID=gene-AD08_RS22160;Name=AD08_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22160;old_locus_tag=AD08_5364 NZ_JHDJ01000087.1 Protein Homology CDS 709 1569 . + 0 ID=cds-WP_000027057.1-2;Parent=gene-AD08_RS22160;Dbxref=Genbank:WP_000027057.1;Name=WP_000027057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AD08_RS22160;product=class A broad-spectrum beta-lactamase TEM-1;protein_id=WP_000027057.1;transl_table=11 ##sequence-region NZ_JHDJ01000088.1 1 509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000088.1 RefSeq region 1 509 . + . ID=NZ_JHDJ01000088.1:1..509;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000088.1 RefSeq pseudogene 1 438 . - . ID=gene-AD08_RS22155;Name=AD08_RS22155;end_range=438,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS22155;old_locus_tag=AD08_5365;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000088.1 Protein Homology CDS 1 438 . - 0 ID=cds-AD08_RS22155;Parent=gene-AD08_RS22155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=438,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AD08_RS22155;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDJ01000089.1 1 929 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000089.1 RefSeq region 1 929 . + . ID=NZ_JHDJ01000089.1:1..929;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000089.1 RefSeq gene 1 888 . - . ID=gene-AD08_RS22150;Name=AD08_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22150;old_locus_tag=AD08_5366;partial=true;start_range=.,1 NZ_JHDJ01000089.1 Protein Homology CDS 1 888 . - 0 ID=cds-WP_050436504.1;Parent=gene-AD08_RS22150;Dbxref=Genbank:WP_050436504.1;Name=WP_050436504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011477313.1;locus_tag=AD08_RS22150;partial=true;product=malate dehydrogenase;protein_id=WP_050436504.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDJ01000090.1 1 6306 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000090.1 RefSeq region 1 6306 . + . ID=NZ_JHDJ01000090.1:1..6306;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000090.1 RefSeq gene 1 761 . - . ID=gene-AD08_RS22145;Name=AD08_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22145;old_locus_tag=AD08_5367;partial=true;start_range=.,1 NZ_JHDJ01000090.1 Protein Homology CDS 1 761 . - 0 ID=cds-WP_071995804.1-2;Parent=gene-AD08_RS22145;Dbxref=Genbank:WP_071995804.1;Name=WP_071995804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764249.1;locus_tag=AD08_RS22145;partial=true;product=DUF968 domain-containing protein;protein_id=WP_071995804.1;start_range=.,1;transl_table=11 NZ_JHDJ01000090.1 RefSeq gene 769 1584 . - . ID=gene-AD08_RS22140;Name=AD08_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22140;old_locus_tag=AD08_5368 NZ_JHDJ01000090.1 Protein Homology CDS 769 1584 . - 0 ID=cds-WP_001072669.1-3;Parent=gene-AD08_RS22140;Dbxref=Genbank:WP_001072669.1;Name=WP_001072669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001072668.1;locus_tag=AD08_RS22140;product=KilA-N domain-containing protein;protein_id=WP_001072669.1;transl_table=11 NZ_JHDJ01000090.1 RefSeq gene 1747 2142 . - . ID=gene-AD08_RS22135;Name=AD08_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22135;old_locus_tag=AD08_5369 NZ_JHDJ01000090.1 Protein Homology CDS 1747 2142 . - 0 ID=cds-WP_000767110.1-3;Parent=gene-AD08_RS22135;Dbxref=Genbank:WP_000767110.1;Name=WP_000767110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767123.1;locus_tag=AD08_RS22135;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_000767110.1;transl_table=11 NZ_JHDJ01000090.1 RefSeq gene 2139 2465 . - . ID=gene-AD08_RS22130;Name=AD08_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22130;old_locus_tag=AD08_5370 NZ_JHDJ01000090.1 Protein Homology CDS 2139 2465 . - 0 ID=cds-WP_000210152.1-3;Parent=gene-AD08_RS22130;Dbxref=Genbank:WP_000210152.1;Name=WP_000210152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003878599.1;locus_tag=AD08_RS22130;product=LexA family transcriptional regulator;protein_id=WP_000210152.1;transl_table=11 NZ_JHDJ01000090.1 RefSeq gene 2462 3115 . - . ID=gene-AD08_RS22125;Name=AD08_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22125;old_locus_tag=AD08_5371 NZ_JHDJ01000090.1 Protein Homology CDS 2462 3115 . - 0 ID=cds-WP_001409632.1-3;Parent=gene-AD08_RS22125;Dbxref=Genbank:WP_001409632.1;Name=WP_001409632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001378271.1;locus_tag=AD08_RS22125;product=phage N-6-adenine-methyltransferase;protein_id=WP_001409632.1;transl_table=11 NZ_JHDJ01000090.1 RefSeq gene 3115 3609 . - . ID=gene-AD08_RS0124785;Name=AD08_RS0124785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124785 NZ_JHDJ01000090.1 Protein Homology CDS 3115 3609 . - 0 ID=cds-WP_012601564.1-3;Parent=gene-AD08_RS0124785;Dbxref=Genbank:WP_012601564.1;Name=WP_012601564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416858.1;locus_tag=AD08_RS0124785;product=PerC family transcriptional regulator;protein_id=WP_012601564.1;transl_table=11 NZ_JHDJ01000090.1 RefSeq gene 3606 4589 . - . ID=gene-AD08_RS22120;Name=AD08_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22120;old_locus_tag=AD08_5373 NZ_JHDJ01000090.1 Protein Homology CDS 3606 4589 . - 0 ID=cds-WP_032217864.1;Parent=gene-AD08_RS22120;Dbxref=Genbank:WP_032217864.1;Name=WP_032217864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092424.1;locus_tag=AD08_RS22120;product=hypothetical protein;protein_id=WP_032217864.1;transl_table=11 NZ_JHDJ01000090.1 RefSeq gene 4586 4885 . - . ID=gene-AD08_RS22115;Name=AD08_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22115;old_locus_tag=AD08_5374 NZ_JHDJ01000090.1 Protein Homology CDS 4586 4885 . - 0 ID=cds-WP_000995577.1-3;Parent=gene-AD08_RS22115;Dbxref=Genbank:WP_000995577.1;Name=WP_000995577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000995578.1;locus_tag=AD08_RS22115;product=hypothetical protein;protein_id=WP_000995577.1;transl_table=11 NZ_JHDJ01000090.1 RefSeq gene 4882 5106 . - . ID=gene-AD08_RS22110;Name=AD08_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22110;old_locus_tag=AD08_5375 NZ_JHDJ01000090.1 Protein Homology CDS 4882 5106 . - 0 ID=cds-WP_021565276.1-3;Parent=gene-AD08_RS22110;Dbxref=Genbank:WP_021565276.1;Name=WP_021565276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000620694.1;locus_tag=AD08_RS22110;product=hypothetical protein;protein_id=WP_021565276.1;transl_table=11 NZ_JHDJ01000090.1 RefSeq gene 5103 6251 . - . ID=gene-AD08_RS22105;Name=AD08_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22105;old_locus_tag=AD08_5376 NZ_JHDJ01000090.1 Protein Homology CDS 5103 6251 . - 0 ID=cds-WP_001530587.1-3;Parent=gene-AD08_RS22105;Dbxref=Genbank:WP_001530587.1;Name=WP_001530587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087306.1;locus_tag=AD08_RS22105;product=rha family phage regulatory protein;protein_id=WP_001530587.1;transl_table=11 ##sequence-region NZ_JHDJ01000091.1 1 11683 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000091.1 RefSeq region 1 11683 . + . ID=NZ_JHDJ01000091.1:1..11683;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000091.1 RefSeq gene 189 1376 . - . ID=gene-AD08_RS22100;Name=AD08_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22100;old_locus_tag=AD08_5377 NZ_JHDJ01000091.1 Protein Homology CDS 189 1376 . - 0 ID=cds-WP_032217558.1-3;Parent=gene-AD08_RS22100;Dbxref=Genbank:WP_032217558.1;Name=WP_032217558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013747467.1;locus_tag=AD08_RS22100;product=IS91 family transposase;protein_id=WP_032217558.1;transl_table=11 NZ_JHDJ01000091.1 RefSeq gene 1376 1741 . - . ID=gene-AD08_RS22095;Name=AD08_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22095;old_locus_tag=AD08_5378 NZ_JHDJ01000091.1 GeneMarkS-2+ CDS 1376 1741 . - 0 ID=cds-WP_000124094.1-3;Parent=gene-AD08_RS22095;Dbxref=Genbank:WP_000124094.1;Name=WP_000124094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS22095;product=hypothetical protein;protein_id=WP_000124094.1;transl_table=11 NZ_JHDJ01000091.1 RefSeq pseudogene 1830 2018 . + . ID=gene-AD08_RS27965;Name=AD08_RS27965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS27965;old_locus_tag=AD08_5379;partial=true;pseudo=true;start_range=.,1830 NZ_JHDJ01000091.1 Protein Homology CDS 1830 2018 . + 0 ID=cds-AD08_RS27965;Parent=gene-AD08_RS27965;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011787828.1;locus_tag=AD08_RS27965;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,1830;transl_table=11 NZ_JHDJ01000091.1 RefSeq gene 2080 3024 . - . ID=gene-AD08_RS22090;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=AD08_RS22090;old_locus_tag=AD08_5380 NZ_JHDJ01000091.1 Protein Homology CDS 2080 3024 . - 0 ID=cds-WP_032217870.1;Parent=gene-AD08_RS22090;Dbxref=Genbank:WP_032217870.1;Name=WP_032217870.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;gbkey=CDS;gene=lpxM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858371.1;locus_tag=AD08_RS22090;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_032217870.1;transl_table=11 NZ_JHDJ01000091.1 RefSeq gene 3089 4039 . - . ID=gene-AD08_RS22085;Name=virK;gbkey=Gene;gene=virK;gene_biotype=protein_coding;locus_tag=AD08_RS22085;old_locus_tag=AD08_5381 NZ_JHDJ01000091.1 Protein Homology CDS 3089 4039 . - 0 ID=cds-WP_001420716.1;Parent=gene-AD08_RS22085;Dbxref=Genbank:WP_001420716.1;Name=WP_001420716.1;gbkey=CDS;gene=virK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858370.1;locus_tag=AD08_RS22085;product=virulence factor VirK;protein_id=WP_001420716.1;transl_table=11 NZ_JHDJ01000091.1 RefSeq gene 4044 5132 . - . ID=gene-AD08_RS27415;Name=capU;gbkey=Gene;gene=capU;gene_biotype=protein_coding;locus_tag=AD08_RS27415 NZ_JHDJ01000091.1 Protein Homology CDS 4044 5132 . - 0 ID=cds-WP_064734354.1;Parent=gene-AD08_RS27415;Dbxref=Genbank:WP_064734354.1;Name=WP_064734354.1;gbkey=CDS;gene=capU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858369.1;locus_tag=AD08_RS27415;product=putative hexosyltransferase CapU;protein_id=WP_064734354.1;transl_table=11 NZ_JHDJ01000091.1 RefSeq gene 5135 5977 . - . ID=gene-AD08_RS22075;Name=AD08_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22075;old_locus_tag=AD08_5383 NZ_JHDJ01000091.1 Protein Homology CDS 5135 5977 . - 0 ID=cds-WP_162752692.1;Parent=gene-AD08_RS22075;Dbxref=Genbank:WP_162752692.1;Name=WP_162752692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858368.1;locus_tag=AD08_RS22075;product=polysaccharide deacetylase family protein;protein_id=WP_162752692.1;transl_table=11 NZ_JHDJ01000091.1 RefSeq pseudogene 6221 6776 . - . ID=gene-AD08_RS0124795;Name=AD08_RS0124795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0124795;pseudo=true NZ_JHDJ01000091.1 Protein Homology CDS 6221 6776 . - 0 ID=cds-AD08_RS0124795;Parent=gene-AD08_RS0124795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001418185.1;locus_tag=AD08_RS0124795;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDJ01000091.1 RefSeq gene 6815 7072 . - . ID=gene-AD08_RS22070;Name=AD08_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22070;old_locus_tag=AD08_5385 NZ_JHDJ01000091.1 Protein Homology CDS 6815 7072 . - 0 ID=cds-WP_000343092.1;Parent=gene-AD08_RS22070;Dbxref=Genbank:WP_000343092.1;Name=WP_000343092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001424665.1;locus_tag=AD08_RS22070;product=hypothetical protein;protein_id=WP_000343092.1;transl_table=11 NZ_JHDJ01000091.1 RefSeq gene 7693 7983 . + . ID=gene-AD08_RS0124800;Name=AD08_RS0124800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124800 NZ_JHDJ01000091.1 Protein Homology CDS 7693 7983 . + 0 ID=cds-WP_077699000.1;Parent=gene-AD08_RS0124800;Dbxref=Genbank:WP_077699000.1;Name=WP_077699000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001213610.1;locus_tag=AD08_RS0124800;product=hypothetical protein;protein_id=WP_077699000.1;transl_table=11 NZ_JHDJ01000091.1 RefSeq gene 7985 8767 . + . ID=gene-AD08_RS22065;Name=AD08_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22065;old_locus_tag=AD08_5388 NZ_JHDJ01000091.1 Protein Homology CDS 7985 8767 . + 0 ID=cds-WP_032217876.1;Parent=gene-AD08_RS22065;Dbxref=Genbank:WP_032217876.1;Name=WP_032217876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001164193.1;locus_tag=AD08_RS22065;product=phage integrase family protein;protein_id=WP_032217876.1;transl_table=11 NZ_JHDJ01000091.1 RefSeq gene 8905 9180 . - . ID=gene-AD08_RS22060;Name=AD08_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22060;old_locus_tag=AD08_5389 NZ_JHDJ01000091.1 Protein Homology CDS 8905 9180 . - 0 ID=cds-WP_032217879.1;Parent=gene-AD08_RS22060;Dbxref=Genbank:WP_032217879.1;Name=WP_032217879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241708.1;locus_tag=AD08_RS22060;product=hypothetical protein;protein_id=WP_032217879.1;transl_table=11 NZ_JHDJ01000091.1 RefSeq gene 9174 9818 . - . ID=gene-AD08_RS22055;Name=AD08_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22055;old_locus_tag=AD08_5390 NZ_JHDJ01000091.1 Protein Homology CDS 9174 9818 . - 0 ID=cds-WP_032217880.1;Parent=gene-AD08_RS22055;Dbxref=Genbank:WP_032217880.1;Name=WP_032217880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633910.1;locus_tag=AD08_RS22055;product=AAA family ATPase;protein_id=WP_032217880.1;transl_table=11 NZ_JHDJ01000091.1 RefSeq gene 10047 11018 . + . ID=gene-AD08_RS22050;Name=AD08_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22050;old_locus_tag=AD08_5391 NZ_JHDJ01000091.1 Protein Homology CDS 10047 11018 . + 0 ID=cds-WP_001103690.1;Parent=gene-AD08_RS22050;Dbxref=Genbank:WP_001103690.1;Name=WP_001103690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001505082.1;locus_tag=AD08_RS22050;product=hypothetical protein;protein_id=WP_001103690.1;transl_table=11 NZ_JHDJ01000091.1 RefSeq gene 11023 11415 . + . ID=gene-AD08_RS22045;Name=AD08_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22045;old_locus_tag=AD08_5392 NZ_JHDJ01000091.1 Protein Homology CDS 11023 11415 . + 0 ID=cds-WP_000340829.1;Parent=gene-AD08_RS22045;Dbxref=Genbank:WP_000340829.1;Name=WP_000340829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001555635.1;locus_tag=AD08_RS22045;product=hypothetical protein;protein_id=WP_000340829.1;transl_table=11 NZ_JHDJ01000091.1 RefSeq pseudogene 11420 11563 . - . ID=gene-AD08_RS27985;Name=AD08_RS27985;end_range=11563,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS27985;partial=true;pseudo=true NZ_JHDJ01000091.1 Protein Homology CDS 11420 11563 . - 0 ID=cds-AD08_RS27985;Parent=gene-AD08_RS27985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=11563,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766293.1;locus_tag=AD08_RS27985;partial=true;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000092.1 1 389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000092.1 RefSeq region 1 389 . + . ID=NZ_JHDJ01000092.1:1..389;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 ##sequence-region NZ_JHDJ01000093.1 1 1422 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000093.1 RefSeq region 1 1422 . + . ID=NZ_JHDJ01000093.1:1..1422;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000093.1 RefSeq gene 1 901 . + . ID=gene-AD08_RS22040;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=AD08_RS22040;old_locus_tag=AD08_5393;partial=true;start_range=.,1 NZ_JHDJ01000093.1 Protein Homology CDS 1 901 . + 1 ID=cds-WP_032217883.1;Parent=gene-AD08_RS22040;Dbxref=Genbank:WP_032217883.1;Name=WP_032217883.1;gbkey=CDS;gene=aceK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418440.1;locus_tag=AD08_RS22040;partial=true;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_032217883.1;start_range=.,1;transl_table=11 NZ_JHDJ01000093.1 RefSeq gene 870 1226 . - . ID=gene-AD08_RS22035;Name=AD08_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22035;old_locus_tag=AD08_5394 NZ_JHDJ01000093.1 Protein Homology CDS 870 1226 . - 0 ID=cds-WP_001400109.1;Parent=gene-AD08_RS22035;Dbxref=Genbank:WP_001400109.1;Name=WP_001400109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001315945.1;locus_tag=AD08_RS22035;product=hypothetical protein;protein_id=WP_001400109.1;transl_table=11 NZ_JHDJ01000093.1 RefSeq gene 1353 1422 . + . ID=gene-AD08_RS27995;Name=AD08_RS27995;end_range=1422,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS27995;partial=true NZ_JHDJ01000093.1 Protein Homology CDS 1353 1422 . + 0 ID=cds-WP_001680836.1;Parent=gene-AD08_RS27995;Dbxref=Genbank:WP_001680836.1;Name=WP_001680836.1;end_range=1422,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD08_RS27995;partial=true;product=hypothetical protein;protein_id=WP_001680836.1;transl_table=11 ##sequence-region NZ_JHDJ01000094.1 1 19005 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000094.1 RefSeq region 1 19005 . + . ID=NZ_JHDJ01000094.1:1..19005;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000094.1 RefSeq gene 1 65 . + . ID=gene-AD08_RS28000;Name=AD08_RS28000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS28000;partial=true;start_range=.,1 NZ_JHDJ01000094.1 Protein Homology CDS 1 65 . + 2 ID=cds-WP_071603212.1;Parent=gene-AD08_RS28000;Dbxref=Genbank:WP_071603212.1;Name=WP_071603212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS28000;partial=true;product=transposase;protein_id=WP_071603212.1;start_range=.,1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 773 1627 . + . ID=gene-AD08_RS22025;Name=AD08_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22025;old_locus_tag=AD08_5396 NZ_JHDJ01000094.1 Protein Homology CDS 773 1627 . + 0 ID=cds-WP_032217888.1;Parent=gene-AD08_RS22025;Dbxref=Genbank:WP_032217888.1;Name=WP_032217888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575760.1;locus_tag=AD08_RS22025;product=hypothetical protein;protein_id=WP_032217888.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 1690 2067 . + . ID=gene-AD08_RS0124805;Name=AD08_RS0124805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124805 NZ_JHDJ01000094.1 Protein Homology CDS 1690 2067 . + 0 ID=cds-WP_050436506.1;Parent=gene-AD08_RS0124805;Dbxref=Genbank:WP_050436506.1;Name=WP_050436506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575759.1;locus_tag=AD08_RS0124805;product=cholera enterotoxin subunit B;protein_id=WP_050436506.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq pseudogene 2936 3058 . - . ID=gene-AD08_RS30995;Name=AD08_RS30995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30995;partial=true;pseudo=true;start_range=.,2936 NZ_JHDJ01000094.1 Protein Homology CDS 2936 3058 . - 0 ID=cds-AD08_RS30995;Parent=gene-AD08_RS30995;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460910.1;locus_tag=AD08_RS30995;partial=true;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;pseudo=true;start_range=.,2936;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 3482 4120 . + . ID=gene-AD08_RS22020;Name=AD08_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22020;old_locus_tag=AD08_5399 NZ_JHDJ01000094.1 Protein Homology CDS 3482 4120 . + 0 ID=cds-WP_032217891.1;Parent=gene-AD08_RS22020;Dbxref=Genbank:WP_032217891.1;Name=WP_032217891.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012422.1;locus_tag=AD08_RS22020;product=response regulator transcription factor;protein_id=WP_032217891.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 4131 4556 . - . ID=gene-AD08_RS0124815;Name=AD08_RS0124815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124815 NZ_JHDJ01000094.1 Protein Homology CDS 4131 4556 . - 0 ID=cds-WP_032217893.1;Parent=gene-AD08_RS0124815;Dbxref=Genbank:WP_032217893.1;Name=WP_032217893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477167.1;locus_tag=AD08_RS0124815;product=lytic transglycosylase domain-containing protein;protein_id=WP_032217893.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 4535 5266 . - . ID=gene-AD08_RS22015;Name=AD08_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22015;old_locus_tag=AD08_5400 NZ_JHDJ01000094.1 Protein Homology CDS 4535 5266 . - 0 ID=cds-WP_032217894.1;Parent=gene-AD08_RS22015;Dbxref=Genbank:WP_032217894.1;Name=WP_032217894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575755.1;locus_tag=AD08_RS22015;product=prepilin peptidase;protein_id=WP_032217894.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 5271 6236 . - . ID=gene-AD08_RS22010;Name=cpaF;gbkey=Gene;gene=cpaF;gene_biotype=protein_coding;locus_tag=AD08_RS22010;old_locus_tag=AD08_5401 NZ_JHDJ01000094.1 Protein Homology CDS 5271 6236 . - 0 ID=cds-WP_001575754.1;Parent=gene-AD08_RS22010;Dbxref=Genbank:WP_001575754.1;Name=WP_001575754.1;gbkey=CDS;gene=cpaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053350.1;locus_tag=AD08_RS22010;product=Flp pilus assembly complex ATPase component TadA;protein_id=WP_001575754.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 6244 7314 . - . ID=gene-AD08_RS22005;Name=AD08_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS22005;old_locus_tag=AD08_5402 NZ_JHDJ01000094.1 Protein Homology CDS 6244 7314 . - 0 ID=cds-WP_032217895.1;Parent=gene-AD08_RS22005;Dbxref=Genbank:WP_032217895.1;Name=WP_032217895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575753.1;locus_tag=AD08_RS22005;product=type II secretion system protein F;protein_id=WP_032217895.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 7307 8926 . - . ID=gene-AD08_RS22000;Name=cpaF;gbkey=Gene;gene=cpaF;gene_biotype=protein_coding;locus_tag=AD08_RS22000;old_locus_tag=AD08_5403 NZ_JHDJ01000094.1 Protein Homology CDS 7307 8926 . - 0 ID=cds-WP_032217917.1;Parent=gene-AD08_RS22000;Dbxref=Genbank:WP_032217917.1;Name=WP_032217917.1;gbkey=CDS;gene=cpaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575752.1;locus_tag=AD08_RS22000;product=Flp pilus assembly complex ATPase component TadA;protein_id=WP_032217917.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 8941 9372 . - . ID=gene-AD08_RS21995;Name=AD08_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21995;old_locus_tag=AD08_5404 NZ_JHDJ01000094.1 GeneMarkS-2+ CDS 8941 9372 . - 0 ID=cds-WP_032217897.1;Parent=gene-AD08_RS21995;Dbxref=Genbank:WP_032217897.1;Name=WP_032217897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS21995;product=hypothetical protein;protein_id=WP_032217897.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 9369 10634 . - . ID=gene-AD08_RS21990;Name=AD08_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21990;old_locus_tag=AD08_5405 NZ_JHDJ01000094.1 GeneMarkS-2+ CDS 9369 10634 . - 0 ID=cds-WP_032217899.1;Parent=gene-AD08_RS21990;Dbxref=Genbank:WP_032217899.1;Name=WP_032217899.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS21990;product=type 4b pilus protein PilO2;protein_id=WP_032217899.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 10636 12297 . - . ID=gene-AD08_RS21985;Name=AD08_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21985;old_locus_tag=AD08_5406 NZ_JHDJ01000094.1 Protein Homology CDS 10636 12297 . - 0 ID=cds-WP_032217900.1;Parent=gene-AD08_RS21985;Dbxref=Genbank:WP_032217900.1;Name=WP_032217900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575747.1;locus_tag=AD08_RS21985;product=membrane protein;protein_id=WP_032217900.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 12310 12957 . - . ID=gene-AD08_RS0124820;Name=AD08_RS0124820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124820 NZ_JHDJ01000094.1 Protein Homology CDS 12310 12957 . - 0 ID=cds-WP_032217902.1;Parent=gene-AD08_RS0124820;Dbxref=Genbank:WP_032217902.1;Name=WP_032217902.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022136.1;locus_tag=AD08_RS0124820;product=hypothetical protein;protein_id=WP_032217902.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 13009 13620 . - . ID=gene-AD08_RS0124825;Name=AD08_RS0124825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124825 NZ_JHDJ01000094.1 Protein Homology CDS 13009 13620 . - 0 ID=cds-WP_113706219.1;Parent=gene-AD08_RS0124825;Dbxref=Genbank:WP_113706219.1;Name=WP_113706219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575744.1;locus_tag=AD08_RS0124825;product=pilus assembly protein;protein_id=WP_113706219.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 13875 14690 . + . ID=gene-AD08_RS21980;Name=AD08_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21980;old_locus_tag=AD08_5407 NZ_JHDJ01000094.1 GeneMarkS-2+ CDS 13875 14690 . + 0 ID=cds-WP_032217904.1;Parent=gene-AD08_RS21980;Dbxref=Genbank:WP_032217904.1;Name=WP_032217904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS21980;product=hypothetical protein;protein_id=WP_032217904.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 14680 15213 . + . ID=gene-AD08_RS21975;Name=AD08_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21975;old_locus_tag=AD08_5408 NZ_JHDJ01000094.1 GeneMarkS-2+ CDS 14680 15213 . + 0 ID=cds-WP_032217906.1;Parent=gene-AD08_RS21975;Dbxref=Genbank:WP_032217906.1;Name=WP_032217906.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS21975;product=hypothetical protein;protein_id=WP_032217906.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 15635 16156 . + . ID=gene-AD08_RS0124830;Name=AD08_RS0124830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124830 NZ_JHDJ01000094.1 GeneMarkS-2+ CDS 15635 16156 . + 0 ID=cds-WP_032217911.1;Parent=gene-AD08_RS0124830;Dbxref=Genbank:WP_032217911.1;Name=WP_032217911.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS0124830;product=type II secretion system protein;protein_id=WP_032217911.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 16110 16682 . + . ID=gene-AD08_RS0124835;Name=AD08_RS0124835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124835 NZ_JHDJ01000094.1 GeneMarkS-2+ CDS 16110 16682 . + 0 ID=cds-WP_032217912.1;Parent=gene-AD08_RS0124835;Dbxref=Genbank:WP_032217912.1;Name=WP_032217912.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS0124835;product=hypothetical protein;protein_id=WP_032217912.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 16978 17160 . + . ID=gene-AD08_RS31540;Name=AD08_RS31540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31540;old_locus_tag=AD08_5411 NZ_JHDJ01000094.1 GeneMarkS-2+ CDS 16978 17160 . + 0 ID=cds-WP_032217913.1;Parent=gene-AD08_RS31540;Dbxref=Genbank:WP_032217913.1;Name=WP_032217913.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS31540;product=hypothetical protein;protein_id=WP_032217913.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 17265 17630 . + . ID=gene-AD08_RS21960;Name=AD08_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21960;old_locus_tag=AD08_5412 NZ_JHDJ01000094.1 GeneMarkS-2+ CDS 17265 17630 . + 0 ID=cds-WP_000124094.1-4;Parent=gene-AD08_RS21960;Dbxref=Genbank:WP_000124094.1;Name=WP_000124094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS21960;product=hypothetical protein;protein_id=WP_000124094.1;transl_table=11 NZ_JHDJ01000094.1 RefSeq gene 17630 18817 . + . ID=gene-AD08_RS21955;Name=AD08_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21955;old_locus_tag=AD08_5413 NZ_JHDJ01000094.1 Protein Homology CDS 17630 18817 . + 0 ID=cds-WP_032217558.1-4;Parent=gene-AD08_RS21955;Dbxref=Genbank:WP_032217558.1;Name=WP_032217558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013747467.1;locus_tag=AD08_RS21955;product=IS91 family transposase;protein_id=WP_032217558.1;transl_table=11 ##sequence-region NZ_JHDJ01000095.1 1 6877 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000095.1 RefSeq region 1 6877 . + . ID=NZ_JHDJ01000095.1:1..6877;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000095.1 RefSeq gene 1 1289 . - . ID=gene-AD08_RS21950;Name=AD08_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21950;old_locus_tag=AD08_5414;partial=true;start_range=.,1 NZ_JHDJ01000095.1 Protein Homology CDS 1 1289 . - 0 ID=cds-WP_032217920.1;Parent=gene-AD08_RS21950;Dbxref=Genbank:WP_032217920.1;Name=WP_032217920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309833.1;locus_tag=AD08_RS21950;partial=true;product=host specificity protein J;protein_id=WP_032217920.1;start_range=.,1;transl_table=11 NZ_JHDJ01000095.1 RefSeq gene 1633 2265 . - . ID=gene-AD08_RS21945;Name=AD08_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21945;old_locus_tag=AD08_5415 NZ_JHDJ01000095.1 Protein Homology CDS 1633 2265 . - 0 ID=cds-WP_061089814.1-2;Parent=gene-AD08_RS21945;Dbxref=Genbank:WP_061089814.1;Name=WP_061089814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188718.1;locus_tag=AD08_RS21945;product=tail assembly protein;protein_id=WP_061089814.1;transl_table=11 NZ_JHDJ01000095.1 RefSeq gene 2211 2954 . - . ID=gene-AD08_RS21940;Name=AD08_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21940;old_locus_tag=AD08_5416 NZ_JHDJ01000095.1 Protein Homology CDS 2211 2954 . - 0 ID=cds-WP_032217922.1;Parent=gene-AD08_RS21940;Dbxref=Genbank:WP_032217922.1;Name=WP_032217922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310264.2;locus_tag=AD08_RS21940;product=phage tail protein;protein_id=WP_032217922.1;transl_table=11 NZ_JHDJ01000095.1 RefSeq gene 2965 3663 . - . ID=gene-AD08_RS21935;Name=AD08_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21935;old_locus_tag=AD08_5417 NZ_JHDJ01000095.1 Protein Homology CDS 2965 3663 . - 0 ID=cds-WP_032217923.1;Parent=gene-AD08_RS21935;Dbxref=Genbank:WP_032217923.1;Name=WP_032217923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310012.1;locus_tag=AD08_RS21935;product=phage minor tail protein L;protein_id=WP_032217923.1;transl_table=11 NZ_JHDJ01000095.1 RefSeq gene 3663 4004 . - . ID=gene-AD08_RS21930;Name=AD08_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21930;old_locus_tag=AD08_5418 NZ_JHDJ01000095.1 Protein Homology CDS 3663 4004 . - 0 ID=cds-WP_000807924.1;Parent=gene-AD08_RS21930;Dbxref=Genbank:WP_000807924.1;Name=WP_000807924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310011.1;locus_tag=AD08_RS21930;product=phage tail protein;protein_id=WP_000807924.1;transl_table=11 NZ_JHDJ01000095.1 RefSeq gene 3997 6877 . - . ID=gene-AD08_RS0124840;Name=AD08_RS0124840;end_range=6877,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124840;partial=true NZ_JHDJ01000095.1 Protein Homology CDS 3997 6877 . - 1 ID=cds-WP_032217925.1;Parent=gene-AD08_RS0124840;Dbxref=Genbank:WP_032217925.1;Name=WP_032217925.1;end_range=6877,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310010.1;locus_tag=AD08_RS0124840;partial=true;product=phage tail tape measure protein;protein_id=WP_032217925.1;transl_table=11 ##sequence-region NZ_JHDJ01000096.1 1 3934 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000096.1 RefSeq region 1 3934 . + . ID=NZ_JHDJ01000096.1:1..3934;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000096.1 RefSeq gene 1 3671 . - . ID=gene-AD08_RS21925;Name=AD08_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21925;old_locus_tag=AD08_5420;partial=true;start_range=.,1 NZ_JHDJ01000096.1 Protein Homology CDS 1 3671 . - 0 ID=cds-WP_032217928.1;Parent=gene-AD08_RS21925;Dbxref=Genbank:WP_032217928.1;Name=WP_032217928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AD08_RS21925;partial=true;product=rhs element protein RhsC;protein_id=WP_032217928.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDJ01000097.1 1 1424 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000097.1 RefSeq region 1 1424 . + . ID=NZ_JHDJ01000097.1:1..1424;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000097.1 RefSeq pseudogene 1 450 . - . ID=gene-AD08_RS21920;Name=AD08_RS21920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS21920;old_locus_tag=AD08_5421;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000097.1 Protein Homology CDS 1 450 . - 0 ID=cds-AD08_RS21920;Parent=gene-AD08_RS21920;Note=catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate%3B also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414867.1;locus_tag=AD08_RS21920;partial=true;product=2-methylcitrate synthase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000097.1 RefSeq gene 797 1424 . - . ID=gene-AD08_RS21915;Name=prpB;end_range=1424,.;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=AD08_RS21915;old_locus_tag=AD08_5422;partial=true NZ_JHDJ01000097.1 Protein Homology CDS 797 1424 . - 1 ID=cds-WP_032217930.1;Parent=gene-AD08_RS21915;Dbxref=Genbank:WP_032217930.1;Name=WP_032217930.1;end_range=1424,.;gbkey=CDS;gene=prpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414865.1;locus_tag=AD08_RS21915;partial=true;product=methylisocitrate lyase;protein_id=WP_032217930.1;transl_table=11 ##sequence-region NZ_JHDJ01000098.1 1 1611 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000098.1 RefSeq region 1 1611 . + . ID=NZ_JHDJ01000098.1:1..1611;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000098.1 RefSeq gene 68 496 . - . ID=gene-AD08_RS21910;Name=AD08_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21910;old_locus_tag=AD08_5423 NZ_JHDJ01000098.1 Protein Homology CDS 68 496 . - 0 ID=cds-WP_001287454.1;Parent=gene-AD08_RS21910;Dbxref=Genbank:WP_001287454.1;Name=WP_001287454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417174.1;locus_tag=AD08_RS21910;product=DedA family protein;protein_id=WP_001287454.1;transl_table=11 NZ_JHDJ01000098.1 RefSeq gene 493 1059 . - . ID=gene-AD08_RS21905;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=AD08_RS21905;old_locus_tag=AD08_5424 NZ_JHDJ01000098.1 Protein Homology CDS 493 1059 . - 0 ID=cds-WP_000273290.1;Parent=gene-AD08_RS21905;Dbxref=Genbank:WP_000273290.1;Name=WP_000273290.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417175.1;locus_tag=AD08_RS21905;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000273290.1;transl_table=11 NZ_JHDJ01000098.1 RefSeq gene 1340 1416 . - . ID=gene-AD08_RS21900;Name=AD08_RS21900;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS21900;old_locus_tag=AD08_5425 NZ_JHDJ01000098.1 tRNAscan-SE tRNA 1340 1416 . - . ID=rna-AD08_RS21900;Parent=gene-AD08_RS21900;anticodon=(pos:complement(1380..1382));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS21900;product=tRNA-Arg NZ_JHDJ01000098.1 tRNAscan-SE exon 1340 1416 . - . ID=exon-AD08_RS21900-1;Parent=rna-AD08_RS21900;anticodon=(pos:complement(1380..1382));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS21900;product=tRNA-Arg NZ_JHDJ01000098.1 RefSeq gene 1480 1556 . - . ID=gene-AD08_RS21895;Name=AD08_RS21895;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS21895;old_locus_tag=AD08_5426 NZ_JHDJ01000098.1 tRNAscan-SE tRNA 1480 1556 . - . ID=rna-AD08_RS21895;Parent=gene-AD08_RS21895;anticodon=(pos:complement(1520..1522));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS21895;product=tRNA-Arg NZ_JHDJ01000098.1 tRNAscan-SE exon 1480 1556 . - . ID=exon-AD08_RS21895-1;Parent=rna-AD08_RS21895;anticodon=(pos:complement(1520..1522));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS21895;product=tRNA-Arg ##sequence-region NZ_JHDJ01000099.1 1 2317 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000099.1 RefSeq region 1 2317 . + . ID=NZ_JHDJ01000099.1:1..2317;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000099.1 RefSeq gene 1 835 . + . ID=gene-AD08_RS21890;Name=AD08_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21890;old_locus_tag=AD08_5427;partial=true;start_range=.,1 NZ_JHDJ01000099.1 Protein Homology CDS 1 835 . + 1 ID=cds-WP_032217933.1;Parent=gene-AD08_RS21890;Dbxref=Genbank:WP_032217933.1;Name=WP_032217933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS21890;partial=true;product=IS3 family transposase;protein_id=WP_032217933.1;start_range=.,1;transl_table=11 NZ_JHDJ01000099.1 RefSeq pseudogene 801 881 . + . ID=gene-AD08_RS31545;Name=AD08_RS31545;end_range=881,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31545;partial=true;pseudo=true NZ_JHDJ01000099.1 Protein Homology CDS 801 881 . + 0 ID=cds-AD08_RS31545;Parent=gene-AD08_RS31545;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=881,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310823.2;locus_tag=AD08_RS31545;partial=true;product=PapI protein;pseudo=true;transl_table=11 NZ_JHDJ01000099.1 RefSeq pseudogene 880 1332 . - . ID=gene-AD08_RS21885;Name=AD08_RS21885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS21885;old_locus_tag=AD08_5428;partial=true;pseudo=true;start_range=.,880 NZ_JHDJ01000099.1 Protein Homology CDS 880 1332 . - 0 ID=cds-AD08_RS21885;Parent=gene-AD08_RS21885;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047234906.1;locus_tag=AD08_RS21885;partial=true;product=IS30 family transposase;pseudo=true;start_range=.,880;transl_table=11 NZ_JHDJ01000099.1 RefSeq pseudogene 1329 1406 . - . ID=gene-AD08_RS31550;Name=AD08_RS31550;end_range=1406,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31550;partial=true;pseudo=true NZ_JHDJ01000099.1 Protein Homology CDS 1329 1406 . - 0 ID=cds-AD08_RS31550;Parent=gene-AD08_RS31550;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1406,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407632.1;locus_tag=AD08_RS31550;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_JHDJ01000099.1 RefSeq gene 1421 2287 . + . ID=gene-AD08_RS21880;Name=AD08_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21880;old_locus_tag=AD08_5429 NZ_JHDJ01000099.1 Protein Homology CDS 1421 2287 . + 0 ID=cds-WP_000878218.1-2;Parent=gene-AD08_RS21880;Dbxref=Genbank:WP_000878218.1;Name=WP_000878218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707076.1;locus_tag=AD08_RS21880;product=IS3 family transposase;protein_id=WP_000878218.1;transl_table=11 ##sequence-region NZ_JHDJ01000100.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000100.1 RefSeq region 1 2047 . + . ID=NZ_JHDJ01000100.1:1..2047;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000100.1 RefSeq gene 71 1516 . - . ID=gene-AD08_RS21875;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=AD08_RS21875;old_locus_tag=AD08_5430 NZ_JHDJ01000100.1 Protein Homology CDS 71 1516 . - 0 ID=cds-WP_000055909.1;Parent=gene-AD08_RS21875;Dbxref=Genbank:WP_000055909.1;Name=WP_000055909.1;gbkey=CDS;gene=tldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417711.1;locus_tag=AD08_RS21875;product=metalloprotease TldD;protein_id=WP_000055909.1;transl_table=11 NZ_JHDJ01000100.1 RefSeq gene 1855 2047 . - . ID=gene-AD08_RS21870;Name=AD08_RS21870;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21870;old_locus_tag=AD08_5431;partial=true NZ_JHDJ01000100.1 Protein Homology CDS 1855 2047 . - 1 ID=cds-WP_032190869.1;Parent=gene-AD08_RS21870;Dbxref=Genbank:WP_032190869.1;Name=WP_032190869.1;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001478462.1;locus_tag=AD08_RS21870;partial=true;product=hypothetical protein;protein_id=WP_032190869.1;transl_table=11 ##sequence-region NZ_JHDJ01000101.1 1 7286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000101.1 RefSeq region 1 7286 . + . ID=NZ_JHDJ01000101.1:1..7286;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000101.1 RefSeq gene 1 300 . - . ID=gene-AD08_RS21865;Name=AD08_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21865;old_locus_tag=AD08_5432;partial=true;start_range=.,1 NZ_JHDJ01000101.1 Protein Homology CDS 1 300 . - 0 ID=cds-WP_000165131.1;Parent=gene-AD08_RS21865;Dbxref=Genbank:WP_000165131.1;Name=WP_000165131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS21865;partial=true;product=transposase;protein_id=WP_000165131.1;start_range=.,1;transl_table=11 NZ_JHDJ01000101.1 RefSeq gene 505 1128 . - . ID=gene-AD08_RS21860;Name=AD08_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21860;old_locus_tag=AD08_5433 NZ_JHDJ01000101.1 Protein Homology CDS 505 1128 . - 0 ID=cds-WP_001155252.1;Parent=gene-AD08_RS21860;Dbxref=Genbank:WP_001155252.1;Name=WP_001155252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001579788.1;locus_tag=AD08_RS21860;product=DNA-binding protein;protein_id=WP_001155252.1;transl_table=11 NZ_JHDJ01000101.1 RefSeq gene 1288 1755 . + . ID=gene-AD08_RS21855;Name=AD08_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21855;old_locus_tag=AD08_5434 NZ_JHDJ01000101.1 Protein Homology CDS 1288 1755 . + 0 ID=cds-WP_000598962.1;Parent=gene-AD08_RS21855;Dbxref=Genbank:WP_000598962.1;Name=WP_000598962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598960.1;locus_tag=AD08_RS21855;product=thermonuclease family protein;protein_id=WP_000598962.1;transl_table=11 NZ_JHDJ01000101.1 RefSeq gene 2145 2396 . - . ID=gene-AD08_RS21845;Name=AD08_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21845;old_locus_tag=AD08_5436 NZ_JHDJ01000101.1 Protein Homology CDS 2145 2396 . - 0 ID=cds-WP_001081067.1;Parent=gene-AD08_RS21845;Dbxref=Genbank:WP_001081067.1;Name=WP_001081067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081066.1;locus_tag=AD08_RS21845;product=hypothetical protein;protein_id=WP_001081067.1;transl_table=11 NZ_JHDJ01000101.1 RefSeq gene 2977 3123 . - . ID=gene-AD08_RS31555;Name=AD08_RS31555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31555;old_locus_tag=AD08_5437 NZ_JHDJ01000101.1 GeneMarkS-2+ CDS 2977 3123 . - 0 ID=cds-WP_001346191.1;Parent=gene-AD08_RS31555;Dbxref=Genbank:WP_001346191.1;Name=WP_001346191.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS31555;product=hypothetical protein;protein_id=WP_001346191.1;transl_table=11 NZ_JHDJ01000101.1 RefSeq pseudogene 3497 4642 . + . ID=gene-AD08_RS31560;Name=AD08_RS31560;end_range=4642,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31560;old_locus_tag=AD08_5438;partial=true;pseudo=true NZ_JHDJ01000101.1 Protein Homology CDS 3497 4642 . + 0 ID=cds-AD08_RS31560;Parent=gene-AD08_RS31560;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4642,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000121273.1;locus_tag=AD08_RS31560;partial=true;product=conjugal transfer protein TrbA;pseudo=true;transl_table=11 NZ_JHDJ01000101.1 RefSeq gene 4792 5916 . + . ID=gene-AD08_RS21835;Name=AD08_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21835;old_locus_tag=AD08_5439 NZ_JHDJ01000101.1 Protein Homology CDS 4792 5916 . + 0 ID=cds-WP_000152385.1;Parent=gene-AD08_RS21835;Dbxref=Genbank:WP_000152385.1;Name=WP_000152385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004031782.1;locus_tag=AD08_RS21835;product=DsbC family protein;protein_id=WP_000152385.1;transl_table=11 NZ_JHDJ01000101.1 RefSeq gene 5897 7036 . + . ID=gene-AD08_RS21830;Name=AD08_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21830;old_locus_tag=AD08_5440 NZ_JHDJ01000101.1 Protein Homology CDS 5897 7036 . + 0 ID=cds-WP_032217950.1;Parent=gene-AD08_RS21830;Dbxref=Genbank:WP_032217950.1;Name=WP_032217950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000077648.1;locus_tag=AD08_RS21830;product=hypothetical protein;protein_id=WP_032217950.1;transl_table=11 NZ_JHDJ01000101.1 RefSeq gene 7088 7286 . + . ID=gene-AD08_RS21825;Name=AD08_RS21825;end_range=7286,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21825;old_locus_tag=AD08_5441;partial=true NZ_JHDJ01000101.1 Protein Homology CDS 7088 7286 . + 0 ID=cds-WP_032217947.1;Parent=gene-AD08_RS21825;Dbxref=Genbank:WP_032217947.1;Name=WP_032217947.1;end_range=7286,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS21825;partial=true;product=transposase;protein_id=WP_032217947.1;transl_table=11 ##sequence-region NZ_JHDJ01000102.1 1 2490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000102.1 RefSeq region 1 2490 . + . ID=NZ_JHDJ01000102.1:1..2490;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000102.1 RefSeq gene 255 2490 . + . ID=gene-AD08_RS21820;Name=AD08_RS21820;end_range=2490,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21820;old_locus_tag=AD08_5442;partial=true NZ_JHDJ01000102.1 GeneMarkS-2+ CDS 255 2490 . + 0 ID=cds-WP_162752714.1;Parent=gene-AD08_RS21820;Dbxref=Genbank:WP_162752714.1;Name=WP_162752714.1;end_range=2490,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS21820;partial=true;product=hypothetical protein;protein_id=WP_162752714.1;transl_table=11 ##sequence-region NZ_JHDJ01000103.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000103.1 RefSeq region 1 2047 . + . ID=NZ_JHDJ01000103.1:1..2047;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000103.1 RefSeq gene 688 1875 . - . ID=gene-AD08_RS21815;Name=AD08_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21815;old_locus_tag=AD08_5444 NZ_JHDJ01000103.1 Protein Homology CDS 688 1875 . - 0 ID=cds-WP_000484598.1;Parent=gene-AD08_RS21815;Dbxref=Genbank:WP_000484598.1;Name=WP_000484598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417591.1;locus_tag=AD08_RS21815;product=YhaC family protein;protein_id=WP_000484598.1;transl_table=11 ##sequence-region NZ_JHDJ01000104.1 1 137632 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000104.1 RefSeq region 1 137632 . + . ID=NZ_JHDJ01000104.1:1..137632;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000104.1 RefSeq pseudogene 1 367 . - . ID=gene-AD08_RS28050;Name=AD08_RS28050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS28050;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000104.1 Protein Homology CDS 1 367 . - 0 ID=cds-AD08_RS28050;Parent=gene-AD08_RS28050;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS28050;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 652 915 . - . ID=gene-AD08_RS0124860;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AD08_RS0124860 NZ_JHDJ01000104.1 Protein Homology CDS 652 915 . - 0 ID=cds-WP_001274021.1;Parent=gene-AD08_RS0124860;Dbxref=Genbank:WP_001274021.1;Name=WP_001274021.1;gbkey=CDS;gene=rpsT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=AD08_RS0124860;product=30S ribosomal protein S20;protein_id=WP_001274021.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 1018 1236 . + . ID=gene-AD08_RS0124865;Name=AD08_RS0124865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124865 NZ_JHDJ01000104.1 Protein Homology CDS 1018 1236 . + 0 ID=cds-WP_001300728.1;Parent=gene-AD08_RS0124865;Dbxref=Genbank:WP_001300728.1;Name=WP_001300728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414565.1;locus_tag=AD08_RS0124865;product=DUF2575 family protein;protein_id=WP_001300728.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 1244 2185 . + . ID=gene-AD08_RS21810;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=AD08_RS21810;old_locus_tag=AD08_0003 NZ_JHDJ01000104.1 Protein Homology CDS 1244 2185 . + 0 ID=cds-WP_000767329.1;Parent=gene-AD08_RS21810;Dbxref=Genbank:WP_000767329.1;Name=WP_000767329.1;gbkey=CDS;gene=ribF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308055.1;locus_tag=AD08_RS21810;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767329.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 2228 5044 . + . ID=gene-AD08_RS21805;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AD08_RS21805;old_locus_tag=AD08_0004 NZ_JHDJ01000104.1 Protein Homology CDS 2228 5044 . + 0 ID=cds-WP_001286857.1;Parent=gene-AD08_RS21805;Dbxref=Genbank:WP_001286857.1;Name=WP_001286857.1;gbkey=CDS;gene=ileS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=AD08_RS21805;product=isoleucine--tRNA ligase;protein_id=WP_001286857.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 5044 5538 . + . ID=gene-AD08_RS21800;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=AD08_RS21800;old_locus_tag=AD08_0005 NZ_JHDJ01000104.1 Protein Homology CDS 5044 5538 . + 0 ID=cds-WP_032217961.1;Parent=gene-AD08_RS21800;Dbxref=Genbank:WP_032217961.1;Name=WP_032217961.1;gbkey=CDS;gene=lspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414568.1;locus_tag=AD08_RS21800;product=lipoprotein signal peptidase;protein_id=WP_032217961.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 5663 6112 . + . ID=gene-AD08_RS21795;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=AD08_RS21795;old_locus_tag=AD08_0006 NZ_JHDJ01000104.1 Protein Homology CDS 5663 6112 . + 0 ID=cds-WP_000004655.1;Parent=gene-AD08_RS21795;Dbxref=Genbank:WP_000004655.1;Name=WP_000004655.1;gbkey=CDS;gene=fkpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308058.1;locus_tag=AD08_RS21795;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000004655.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 6114 7064 . + . ID=gene-AD08_RS21790;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=AD08_RS21790;old_locus_tag=AD08_0007 NZ_JHDJ01000104.1 Protein Homology CDS 6114 7064 . + 0 ID=cds-WP_001166395.1;Parent=gene-AD08_RS21790;Dbxref=Genbank:WP_001166395.1;Name=WP_001166395.1;gbkey=CDS;gene=ispH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=AD08_RS21790;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166395.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 7130 8044 . + . ID=gene-AD08_RS21785;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=AD08_RS21785;old_locus_tag=AD08_0008 NZ_JHDJ01000104.1 Protein Homology CDS 7130 8044 . + 0 ID=cds-WP_001239142.1;Parent=gene-AD08_RS21785;Dbxref=Genbank:WP_001239142.1;Name=WP_001239142.1;gbkey=CDS;gene=rihC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414571.1;locus_tag=AD08_RS21785;product=ribonucleoside hydrolase RihC;protein_id=WP_001239142.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 8211 9032 . + . ID=gene-AD08_RS21780;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=AD08_RS21780;old_locus_tag=AD08_0009 NZ_JHDJ01000104.1 Protein Homology CDS 8211 9032 . + 0 ID=cds-WP_000543604.1;Parent=gene-AD08_RS21780;Dbxref=Genbank:WP_000543604.1;Name=WP_000543604.1;gbkey=CDS;gene=dapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414572.1;locus_tag=AD08_RS21780;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000543604.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 9488 10636 . + . ID=gene-AD08_RS21775;Name=AD08_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21775;old_locus_tag=AD08_0011 NZ_JHDJ01000104.1 Protein Homology CDS 9488 10636 . + 0 ID=cds-WP_000597260.1;Parent=gene-AD08_RS21775;Dbxref=Genbank:WP_000597260.1;Name=WP_000597260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308062.1;locus_tag=AD08_RS21775;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_000597260.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 10654 13875 . + . ID=gene-AD08_RS21770;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=AD08_RS21770;old_locus_tag=AD08_0012 NZ_JHDJ01000104.1 Protein Homology CDS 10654 13875 . + 0 ID=cds-WP_001126348.1;Parent=gene-AD08_RS21770;Dbxref=Genbank:WP_001126348.1;Name=WP_001126348.1;gbkey=CDS;gene=carB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414574.1;locus_tag=AD08_RS21770;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126348.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 14137 14532 . + . ID=gene-AD08_RS21760;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=AD08_RS21760;old_locus_tag=AD08_0014 NZ_JHDJ01000104.1 Protein Homology CDS 14137 14532 . + 0 ID=cds-WP_000333125.1;Parent=gene-AD08_RS21760;Dbxref=Genbank:WP_000333125.1;Name=WP_000333125.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414576.4;locus_tag=AD08_RS21760;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333125.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 14618 15208 . - . ID=gene-AD08_RS21755;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=AD08_RS21755;old_locus_tag=AD08_0015 NZ_JHDJ01000104.1 Protein Homology CDS 14618 15208 . - 0 ID=cds-WP_000122871.1;Parent=gene-AD08_RS21755;Dbxref=Genbank:WP_000122871.1;Name=WP_000122871.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414577.2;locus_tag=AD08_RS21755;product=carnitine operon protein CaiE;protein_id=WP_000122871.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 15214 15999 . - . ID=gene-AD08_RS21750;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=AD08_RS21750;old_locus_tag=AD08_0016 NZ_JHDJ01000104.1 Protein Homology CDS 15214 15999 . - 0 ID=cds-WP_001295419.1;Parent=gene-AD08_RS21750;Dbxref=Genbank:WP_001295419.1;Name=WP_001295419.1;gbkey=CDS;gene=caiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414578.2;locus_tag=AD08_RS21750;product=crotonobetainyl-CoA hydratase;protein_id=WP_001295419.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 16108 17661 . - . ID=gene-AD08_RS21745;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=AD08_RS21745;old_locus_tag=AD08_0017 NZ_JHDJ01000104.1 Protein Homology CDS 16108 17661 . - 0 ID=cds-WP_001338228.1;Parent=gene-AD08_RS21745;Dbxref=Genbank:WP_001338228.1;Name=WP_001338228.1;gbkey=CDS;gene=caiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414579.4;locus_tag=AD08_RS21745;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_001338228.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 17735 18952 . - . ID=gene-AD08_RS21740;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=AD08_RS21740;old_locus_tag=AD08_0018 NZ_JHDJ01000104.1 Protein Homology CDS 17735 18952 . - 0 ID=cds-WP_001734805.1;Parent=gene-AD08_RS21740;Dbxref=Genbank:WP_001734805.1;Name=WP_001734805.1;gbkey=CDS;gene=caiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414580.1;locus_tag=AD08_RS21740;product=L-carnitine CoA-transferase;protein_id=WP_001734805.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 19081 20223 . - . ID=gene-AD08_RS21735;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=AD08_RS21735;old_locus_tag=AD08_0019 NZ_JHDJ01000104.1 Protein Homology CDS 19081 20223 . - 0 ID=cds-WP_000347117.1;Parent=gene-AD08_RS21735;Dbxref=Genbank:WP_000347117.1;Name=WP_000347117.1;gbkey=CDS;gene=caiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=AD08_RS21735;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347117.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 20254 21768 . - . ID=gene-AD08_RS21730;Name=AD08_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21730;old_locus_tag=AD08_0020 NZ_JHDJ01000104.1 Protein Homology CDS 20254 21768 . - 0 ID=cds-WP_000787103.1;Parent=gene-AD08_RS21730;Dbxref=Genbank:WP_000787103.1;Name=WP_000787103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414582.1;locus_tag=AD08_RS21730;product=L-carnitine/gamma-butyrobetaine antiport BCCT transporter;protein_id=WP_000787103.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 22240 23010 . + . ID=gene-AD08_RS21725;Name=AD08_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21725;old_locus_tag=AD08_0021 NZ_JHDJ01000104.1 Protein Homology CDS 22240 23010 . + 0 ID=cds-WP_000692204.1;Parent=gene-AD08_RS21725;Dbxref=Genbank:WP_000692204.1;Name=WP_000692204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414583.2;locus_tag=AD08_RS21725;product=electron transfer flavoprotein FixA;protein_id=WP_000692204.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 23025 23966 . + . ID=gene-AD08_RS21720;Name=AD08_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21720;old_locus_tag=AD08_0022 NZ_JHDJ01000104.1 Protein Homology CDS 23025 23966 . + 0 ID=cds-WP_032217969.1;Parent=gene-AD08_RS21720;Dbxref=Genbank:WP_032217969.1;Name=WP_032217969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414584.1;locus_tag=AD08_RS21720;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_032217969.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 24017 25303 . + . ID=gene-AD08_RS21715;Name=AD08_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21715;old_locus_tag=AD08_0023 NZ_JHDJ01000104.1 Protein Homology CDS 24017 25303 . + 0 ID=cds-WP_001287715.1;Parent=gene-AD08_RS21715;Dbxref=Genbank:WP_001287715.1;Name=WP_001287715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414585.1;locus_tag=AD08_RS21715;product=FAD-dependent oxidoreductase;protein_id=WP_001287715.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 25300 25587 . + . ID=gene-AD08_RS21710;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=AD08_RS21710;old_locus_tag=AD08_0024 NZ_JHDJ01000104.1 Protein Homology CDS 25300 25587 . + 0 ID=cds-WP_000203741.1;Parent=gene-AD08_RS21710;Dbxref=Genbank:WP_000203741.1;Name=WP_000203741.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308074.1;locus_tag=AD08_RS21710;product=ferredoxin-like protein FixX;protein_id=WP_000203741.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 25644 26975 . + . ID=gene-AD08_RS21705;Name=AD08_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21705;old_locus_tag=AD08_0025 NZ_JHDJ01000104.1 Protein Homology CDS 25644 26975 . + 0 ID=cds-WP_001183198.1;Parent=gene-AD08_RS21705;Dbxref=Genbank:WP_001183198.1;Name=WP_001183198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414587.1;locus_tag=AD08_RS21705;product=MFS transporter;protein_id=WP_001183198.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 27083 27613 . + . ID=gene-AD08_RS21700;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=AD08_RS21700;old_locus_tag=AD08_0026 NZ_JHDJ01000104.1 Protein Homology CDS 27083 27613 . + 0 ID=cds-WP_000600725.1;Parent=gene-AD08_RS21700;Dbxref=Genbank:WP_000600725.1;Name=WP_000600725.1;gbkey=CDS;gene=kefF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414588.1;locus_tag=AD08_RS21700;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600725.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 27606 29468 . + . ID=gene-AD08_RS21695;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=AD08_RS21695;old_locus_tag=AD08_0027 NZ_JHDJ01000104.1 Protein Homology CDS 27606 29468 . + 0 ID=cds-WP_000377098.1;Parent=gene-AD08_RS21695;Dbxref=Genbank:WP_000377098.1;Name=WP_000377098.1;gbkey=CDS;gene=kefC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414589.1;locus_tag=AD08_RS21695;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377098.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 29660 30139 . + . ID=gene-AD08_RS21690;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=AD08_RS21690;old_locus_tag=AD08_0028 NZ_JHDJ01000104.1 Protein Homology CDS 29660 30139 . + 0 ID=cds-WP_000624375.1;Parent=gene-AD08_RS21690;Dbxref=Genbank:WP_000624375.1;Name=WP_000624375.1;gbkey=CDS;gene=folA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=AD08_RS21690;product=type 3 dihydrofolate reductase;protein_id=WP_000624375.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 30217 31059 . - . ID=gene-AD08_RS21685;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=AD08_RS21685;old_locus_tag=AD08_0029 NZ_JHDJ01000104.1 Protein Homology CDS 30217 31059 . - 0 ID=cds-WP_000257192.1;Parent=gene-AD08_RS21685;Dbxref=Genbank:WP_000257192.1;Name=WP_000257192.1;gbkey=CDS;gene=apaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414591.1;locus_tag=AD08_RS21685;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical);protein_id=WP_000257192.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 31066 31443 . - . ID=gene-AD08_RS21680;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=AD08_RS21680;old_locus_tag=AD08_0030 NZ_JHDJ01000104.1 Protein Homology CDS 31066 31443 . - 0 ID=cds-WP_000610901.1;Parent=gene-AD08_RS21680;Dbxref=Genbank:WP_000610901.1;Name=WP_000610901.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308082.1;locus_tag=AD08_RS21680;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610901.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 31446 32267 . - . ID=gene-AD08_RS21675;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=AD08_RS21675;old_locus_tag=AD08_0031 NZ_JHDJ01000104.1 Protein Homology CDS 31446 32267 . - 0 ID=cds-WP_001065381.1;Parent=gene-AD08_RS21675;Dbxref=Genbank:WP_001065381.1;Name=WP_001065381.1;gbkey=CDS;gene=rsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414593.1;locus_tag=AD08_RS21675;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065381.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 32264 33253 . - . ID=gene-AD08_RS21670;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=AD08_RS21670;old_locus_tag=AD08_0032 NZ_JHDJ01000104.1 Protein Homology CDS 32264 33253 . - 0 ID=cds-WP_000241277.1;Parent=gene-AD08_RS21670;Dbxref=Genbank:WP_000241277.1;Name=WP_000241277.1;gbkey=CDS;gene=pdxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414594.1;locus_tag=AD08_RS21670;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000241277.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 33253 34539 . - . ID=gene-AD08_RS21665;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=AD08_RS21665;old_locus_tag=AD08_0033 NZ_JHDJ01000104.1 Protein Homology CDS 33253 34539 . - 0 ID=cds-WP_000800457.1;Parent=gene-AD08_RS21665;Dbxref=Genbank:WP_000800457.1;Name=WP_000800457.1;gbkey=CDS;gene=surA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308085.1;locus_tag=AD08_RS21665;product=peptidylprolyl isomerase SurA;protein_id=WP_000800457.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 34592 36946 . - . ID=gene-AD08_RS21660;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=AD08_RS21660;old_locus_tag=AD08_0034 NZ_JHDJ01000104.1 Protein Homology CDS 34592 36946 . - 0 ID=cds-WP_001386972.1;Parent=gene-AD08_RS21660;Dbxref=Genbank:WP_001386972.1;Name=WP_001386972.1;gbkey=CDS;gene=lptD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414596.1;locus_tag=AD08_RS21660;product=LPS assembly protein LptD;protein_id=WP_001386972.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 37201 38016 . + . ID=gene-AD08_RS21655;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=AD08_RS21655;old_locus_tag=AD08_0035 NZ_JHDJ01000104.1 Protein Homology CDS 37201 38016 . + 0 ID=cds-WP_001200579.1;Parent=gene-AD08_RS21655;Dbxref=Genbank:WP_001200579.1;Name=WP_001200579.1;gbkey=CDS;gene=djlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414597.1;locus_tag=AD08_RS21655;product=co-chaperone DjlA;protein_id=WP_001200579.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 38311 39102 . + . ID=gene-AD08_RS21650;Name=AD08_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21650;old_locus_tag=AD08_0036 NZ_JHDJ01000104.1 Protein Homology CDS 38311 39102 . + 0 ID=cds-WP_032213782.1;Parent=gene-AD08_RS21650;Dbxref=Genbank:WP_032213782.1;Name=WP_032213782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232451.1;locus_tag=AD08_RS21650;product=UDP pyrophosphate phosphatase;protein_id=WP_032213782.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq pseudogene 39119 39297 . - . ID=gene-AD08_RS31005;Name=AD08_RS31005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31005;partial=true;pseudo=true;start_range=.,39119 NZ_JHDJ01000104.1 Protein Homology CDS 39119 39297 . - 0 ID=cds-AD08_RS31005;Parent=gene-AD08_RS31005;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000244358.1;locus_tag=AD08_RS31005;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,39119;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 39510 40169 . - . ID=gene-AD08_RS21645;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=AD08_RS21645;old_locus_tag=AD08_0037 NZ_JHDJ01000104.1 Protein Homology CDS 39510 40169 . - 0 ID=cds-WP_000525176.1;Parent=gene-AD08_RS21645;Dbxref=Genbank:WP_000525176.1;Name=WP_000525176.1;gbkey=CDS;gene=rluA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414600.1;locus_tag=AD08_RS21645;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525176.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 40181 43087 . - . ID=gene-AD08_RS21640;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=AD08_RS21640;old_locus_tag=AD08_0038 NZ_JHDJ01000104.1 Protein Homology CDS 40181 43087 . - 0 ID=cds-WP_001117011.1;Parent=gene-AD08_RS21640;Dbxref=Genbank:WP_001117011.1;Name=WP_001117011.1;gbkey=CDS;gene=rapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=AD08_RS21640;product=RNA polymerase-associated protein RapA;protein_id=WP_001117011.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 43252 45603 . - . ID=gene-AD08_RS21635;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=AD08_RS21635;old_locus_tag=AD08_0039 NZ_JHDJ01000104.1 Protein Homology CDS 43252 45603 . - 0 ID=cds-WP_000035670.1;Parent=gene-AD08_RS21635;Dbxref=Genbank:WP_000035670.1;Name=WP_000035670.1;gbkey=CDS;gene=polB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414602.1;locus_tag=AD08_RS21635;product=DNA polymerase II;protein_id=WP_000035670.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 45678 46373 . - . ID=gene-AD08_RS21630;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AD08_RS21630;old_locus_tag=AD08_0040 NZ_JHDJ01000104.1 Protein Homology CDS 45678 46373 . - 0 ID=cds-WP_000888666.1-2;Parent=gene-AD08_RS21630;Dbxref=Genbank:WP_000888666.1;Name=WP_000888666.1;gbkey=CDS;gene=araD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124519.1;locus_tag=AD08_RS21630;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888666.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 46913 48415 . - . ID=gene-AD08_RS21625;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=AD08_RS21625;old_locus_tag=AD08_0041 NZ_JHDJ01000104.1 Protein Homology CDS 46913 48415 . - 0 ID=cds-WP_000151748.1;Parent=gene-AD08_RS21625;Dbxref=Genbank:WP_000151748.1;Name=WP_000151748.1;gbkey=CDS;gene=araA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414604.1;locus_tag=AD08_RS21625;product=L-arabinose isomerase;protein_id=WP_000151748.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 48426 50126 . - . ID=gene-AD08_RS21620;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=AD08_RS21620;old_locus_tag=AD08_0042 NZ_JHDJ01000104.1 Protein Homology CDS 48426 50126 . - 0 ID=cds-WP_000951856.1;Parent=gene-AD08_RS21620;Dbxref=Genbank:WP_000951856.1;Name=WP_000951856.1;gbkey=CDS;gene=araB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414605.1;locus_tag=AD08_RS21620;product=ribulokinase;protein_id=WP_000951856.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 50465 51343 . + . ID=gene-AD08_RS21615;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=AD08_RS21615;old_locus_tag=AD08_0043 NZ_JHDJ01000104.1 Protein Homology CDS 50465 51343 . + 0 ID=cds-WP_001398621.1;Parent=gene-AD08_RS21615;Dbxref=Genbank:WP_001398621.1;Name=WP_001398621.1;gbkey=CDS;gene=araC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308095.1;locus_tag=AD08_RS21615;product=arabinose operon transcriptional regulator AraC;protein_id=WP_001398621.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 51429 52193 . + . ID=gene-AD08_RS21610;Name=AD08_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21610;old_locus_tag=AD08_0044 NZ_JHDJ01000104.1 Protein Homology CDS 51429 52193 . + 0 ID=cds-WP_001148390.1;Parent=gene-AD08_RS21610;Dbxref=Genbank:WP_001148390.1;Name=WP_001148390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414607.1;locus_tag=AD08_RS21610;product=DedA family protein;protein_id=WP_001148390.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 52307 53005 . - . ID=gene-AD08_RS21605;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=AD08_RS21605;old_locus_tag=AD08_0045 NZ_JHDJ01000104.1 Protein Homology CDS 52307 53005 . - 0 ID=cds-WP_000916281.1;Parent=gene-AD08_RS21605;Dbxref=Genbank:WP_000916281.1;Name=WP_000916281.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414608.1;locus_tag=AD08_RS21605;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000916281.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 52989 54599 . - . ID=gene-AD08_RS21600;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=AD08_RS21600;old_locus_tag=AD08_0046 NZ_JHDJ01000104.1 Protein Homology CDS 52989 54599 . - 0 ID=cds-WP_032217978.1;Parent=gene-AD08_RS21600;Dbxref=Genbank:WP_032217978.1;Name=WP_032217978.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414609.1;locus_tag=AD08_RS21600;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_032217978.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 54575 55558 . - . ID=gene-AD08_RS21595;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=AD08_RS21595;old_locus_tag=AD08_0047 NZ_JHDJ01000104.1 Protein Homology CDS 54575 55558 . - 0 ID=cds-WP_032189316.1;Parent=gene-AD08_RS21595;Dbxref=Genbank:WP_032189316.1;Name=WP_032189316.1;gbkey=CDS;gene=thiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414610.1;locus_tag=AD08_RS21595;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_032189316.1;transl_table=11 NZ_JHDJ01000104.1 cmsearch riboswitch 55589 55688 . - . ID=id-NZ_JHDJ01000104.1:55589..55688;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_JHDJ01000104.1 RefSeq gene 55722 57377 . - . ID=gene-AD08_RS21590;Name=AD08_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21590;old_locus_tag=AD08_0048 NZ_JHDJ01000104.1 Protein Homology CDS 55722 57377 . - 0 ID=cds-WP_001138624.1;Parent=gene-AD08_RS21590;Dbxref=Genbank:WP_001138624.1;Name=WP_001138624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414611.1;locus_tag=AD08_RS21590;product=DNA-binding transcriptional regulator SgrR;protein_id=WP_001138624.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 57466 57597 . + . ID=gene-AD08_RS21585;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=AD08_RS21585;old_locus_tag=AD08_0049 NZ_JHDJ01000104.1 Protein Homology CDS 57466 57597 . + 0 ID=cds-WP_001248770.1;Parent=gene-AD08_RS21585;Dbxref=Genbank:WP_001248770.1;Name=WP_001248770.1;gbkey=CDS;gene=sgrT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791237.1;locus_tag=AD08_RS21585;product=glucose uptake inhibitor SgrT;protein_id=WP_001248770.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 57699 58877 . + . ID=gene-AD08_RS21580;Name=setA;gbkey=Gene;gene=setA;gene_biotype=protein_coding;locus_tag=AD08_RS21580;old_locus_tag=AD08_0050 NZ_JHDJ01000104.1 Protein Homology CDS 57699 58877 . + 0 ID=cds-WP_000637847.1;Parent=gene-AD08_RS21580;Dbxref=Genbank:WP_000637847.1;Name=WP_000637847.1;gbkey=CDS;gene=setA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025293.1;locus_tag=AD08_RS21580;product=sugar efflux transporter SetA;protein_id=WP_000637847.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 58926 59531 . - . ID=gene-AD08_RS21575;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=AD08_RS21575;old_locus_tag=AD08_0051 NZ_JHDJ01000104.1 Protein Homology CDS 58926 59531 . - 0 ID=cds-WP_000818228.1;Parent=gene-AD08_RS21575;Dbxref=Genbank:WP_000818228.1;Name=WP_000818228.1;gbkey=CDS;gene=leuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414613.1;locus_tag=AD08_RS21575;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818228.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 59542 60942 . - . ID=gene-AD08_RS21570;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=AD08_RS21570;old_locus_tag=AD08_0052 NZ_JHDJ01000104.1 Protein Homology CDS 59542 60942 . - 0 ID=cds-WP_001140652.1;Parent=gene-AD08_RS21570;Dbxref=Genbank:WP_001140652.1;Name=WP_001140652.1;gbkey=CDS;gene=leuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414614.1;locus_tag=AD08_RS21570;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140652.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 60945 62036 . - . ID=gene-AD08_RS21565;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=AD08_RS21565;old_locus_tag=AD08_0053 NZ_JHDJ01000104.1 Protein Homology CDS 60945 62036 . - 0 ID=cds-WP_000042353.1;Parent=gene-AD08_RS21565;Dbxref=Genbank:WP_000042353.1;Name=WP_000042353.1;gbkey=CDS;gene=leuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=AD08_RS21565;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042353.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 62036 63607 . - . ID=gene-AD08_RS21560;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=AD08_RS21560;old_locus_tag=AD08_0054 NZ_JHDJ01000104.1 Protein Homology CDS 62036 63607 . - 0 ID=cds-WP_000082850.1;Parent=gene-AD08_RS21560;Dbxref=Genbank:WP_000082850.1;Name=WP_000082850.1;gbkey=CDS;gene=leuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=AD08_RS21560;product=2-isopropylmalate synthase;protein_id=WP_000082850.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 63700 63786 . - . ID=gene-AD08_RS0124880;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=AD08_RS0124880 NZ_JHDJ01000104.1 Protein Homology CDS 63700 63786 . - 0 ID=cds-WP_001300467.1;Parent=gene-AD08_RS0124880;Dbxref=Genbank:WP_001300467.1;Name=WP_001300467.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308106.1;locus_tag=AD08_RS0124880;product=leu operon leader peptide;protein_id=WP_001300467.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 64446 65390 . + . ID=gene-AD08_RS21555;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=AD08_RS21555;old_locus_tag=AD08_0056 NZ_JHDJ01000104.1 Protein Homology CDS 64446 65390 . + 0 ID=cds-WP_001115472.1;Parent=gene-AD08_RS21555;Dbxref=Genbank:WP_001115472.1;Name=WP_001115472.1;gbkey=CDS;gene=leuO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414618.4;locus_tag=AD08_RS21555;product=transcriptional regulator LeuO;protein_id=WP_001115472.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 65545 65589 . - . ID=gene-AD08_RS31565;Name=AD08_RS31565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31565 NZ_JHDJ01000104.1 Protein Homology CDS 65545 65589 . - 0 ID=cds-WP_120795371.1;Parent=gene-AD08_RS31565;Dbxref=Genbank:WP_120795371.1;Name=WP_120795371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518736.1;locus_tag=AD08_RS31565;product=protein YabR;protein_id=WP_120795371.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 65708 67432 . + . ID=gene-AD08_RS21550;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=AD08_RS21550;old_locus_tag=AD08_0058 NZ_JHDJ01000104.1 Protein Homology CDS 65708 67432 . + 0 ID=cds-WP_001295534.1;Parent=gene-AD08_RS21550;Dbxref=Genbank:WP_001295534.1;Name=WP_001295534.1;gbkey=CDS;gene=ilvI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025294.2;locus_tag=AD08_RS21550;product=acetolactate synthase 3 large subunit;protein_id=WP_001295534.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 67435 67926 . + . ID=gene-AD08_RS21545;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AD08_RS21545;old_locus_tag=AD08_0059 NZ_JHDJ01000104.1 Protein Homology CDS 67435 67926 . + 0 ID=cds-WP_001300383.1;Parent=gene-AD08_RS21545;Dbxref=Genbank:WP_001300383.1;Name=WP_001300383.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=AD08_RS21545;product=acetolactate synthase small subunit;protein_id=WP_001300383.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 67938 68024 . + . ID=gene-AD08_RS0124885;Name=AD08_RS0124885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124885 NZ_JHDJ01000104.1 Protein Homology CDS 67938 68024 . + 0 ID=cds-WP_001303787.1;Parent=gene-AD08_RS0124885;Dbxref=Genbank:WP_001303787.1;Name=WP_001303787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308110.1;locus_tag=AD08_RS0124885;product=fruR/shl operon leader peptide;protein_id=WP_001303787.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 68106 69110 . + . ID=gene-AD08_RS21540;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=AD08_RS21540;old_locus_tag=AD08_0060 NZ_JHDJ01000104.1 Protein Homology CDS 68106 69110 . + 0 ID=cds-WP_000762401.1;Parent=gene-AD08_RS21540;Dbxref=Genbank:WP_000762401.1;Name=WP_000762401.1;gbkey=CDS;gene=cra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308111.1;locus_tag=AD08_RS21540;product=catabolite repressor/activator;protein_id=WP_000762401.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 69712 70170 . + . ID=gene-AD08_RS21535;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=AD08_RS21535;old_locus_tag=AD08_0062 NZ_JHDJ01000104.1 Protein Homology CDS 69712 70170 . + 0 ID=cds-WP_001295533.1;Parent=gene-AD08_RS21535;Dbxref=Genbank:WP_001295533.1;Name=WP_001295533.1;gbkey=CDS;gene=mraZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414623.1;locus_tag=AD08_RS21535;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_001295533.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 70172 71113 . + . ID=gene-AD08_RS21530;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=AD08_RS21530;old_locus_tag=AD08_0063 NZ_JHDJ01000104.1 Protein Homology CDS 70172 71113 . + 0 ID=cds-WP_000970479.1;Parent=gene-AD08_RS21530;Dbxref=Genbank:WP_000970479.1;Name=WP_000970479.1;gbkey=CDS;gene=rsmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308113.1;locus_tag=AD08_RS21530;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970479.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 71110 71475 . + . ID=gene-AD08_RS21525;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=AD08_RS21525;old_locus_tag=AD08_0064 NZ_JHDJ01000104.1 Protein Homology CDS 71110 71475 . + 0 ID=cds-WP_000625658.1;Parent=gene-AD08_RS21525;Dbxref=Genbank:WP_000625658.1;Name=WP_000625658.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=AD08_RS21525;product=cell division protein FtsL;protein_id=WP_000625658.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 71491 73257 . + . ID=gene-AD08_RS21520;Name=AD08_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21520;old_locus_tag=AD08_0065 NZ_JHDJ01000104.1 Protein Homology CDS 71491 73257 . + 0 ID=cds-WP_000642196.1;Parent=gene-AD08_RS21520;Dbxref=Genbank:WP_000642196.1;Name=WP_000642196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=AD08_RS21520;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642196.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 73244 74731 . + . ID=gene-AD08_RS21515;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=AD08_RS21515;old_locus_tag=AD08_0066 NZ_JHDJ01000104.1 Protein Homology CDS 73244 74731 . + 0 ID=cds-WP_032217984.1;Parent=gene-AD08_RS21515;Dbxref=Genbank:WP_032217984.1;Name=WP_032217984.1;gbkey=CDS;gene=murE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414627.1;locus_tag=AD08_RS21515;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_032217984.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 74728 76086 . + . ID=gene-AD08_RS21510;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AD08_RS21510;old_locus_tag=AD08_0067 NZ_JHDJ01000104.1 Protein Homology CDS 74728 76086 . + 0 ID=cds-WP_000626685.1;Parent=gene-AD08_RS21510;Dbxref=Genbank:WP_000626685.1;Name=WP_000626685.1;gbkey=CDS;gene=murF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414628.1;locus_tag=AD08_RS21510;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626685.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 76080 77162 . + . ID=gene-AD08_RS21505;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AD08_RS21505;old_locus_tag=AD08_0068 NZ_JHDJ01000104.1 Protein Homology CDS 76080 77162 . + 0 ID=cds-WP_000964131.1;Parent=gene-AD08_RS21505;Dbxref=Genbank:WP_000964131.1;Name=WP_000964131.1;gbkey=CDS;gene=mraY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=AD08_RS21505;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964131.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 77165 78481 . + . ID=gene-AD08_RS21500;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AD08_RS21500;old_locus_tag=AD08_0069 NZ_JHDJ01000104.1 Protein Homology CDS 77165 78481 . + 0 ID=cds-WP_000796481.1;Parent=gene-AD08_RS21500;Dbxref=Genbank:WP_000796481.1;Name=WP_000796481.1;gbkey=CDS;gene=murD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=AD08_RS21500;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796481.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 78481 79725 . + . ID=gene-AD08_RS21495;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=AD08_RS21495;old_locus_tag=AD08_0070 NZ_JHDJ01000104.1 Protein Homology CDS 78481 79725 . + 0 ID=cds-WP_001295532.1;Parent=gene-AD08_RS21495;Dbxref=Genbank:WP_001295532.1;Name=WP_001295532.1;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308120.1;locus_tag=AD08_RS21495;product=cell division protein FtsW;protein_id=WP_001295532.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 79722 80789 . + . ID=gene-AD08_RS21490;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=AD08_RS21490;old_locus_tag=AD08_0071 NZ_JHDJ01000104.1 Protein Homology CDS 79722 80789 . + 0 ID=cds-WP_000016560.1;Parent=gene-AD08_RS21490;Dbxref=Genbank:WP_000016560.1;Name=WP_000016560.1;gbkey=CDS;gene=murG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414632.1;locus_tag=AD08_RS21490;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016560.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 80843 82318 . + . ID=gene-AD08_RS21485;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AD08_RS21485;old_locus_tag=AD08_0072 NZ_JHDJ01000104.1 Protein Homology CDS 80843 82318 . + 0 ID=cds-WP_001096049.1;Parent=gene-AD08_RS21485;Dbxref=Genbank:WP_001096049.1;Name=WP_001096049.1;gbkey=CDS;gene=murC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414633.1;locus_tag=AD08_RS21485;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096049.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 82311 83231 . + . ID=gene-AD08_RS21480;Name=AD08_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21480;old_locus_tag=AD08_0073 NZ_JHDJ01000104.1 Protein Homology CDS 82311 83231 . + 0 ID=cds-WP_000130056.1;Parent=gene-AD08_RS21480;Dbxref=Genbank:WP_000130056.1;Name=WP_000130056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414634.1;locus_tag=AD08_RS21480;product=D-alanine--D-alanine ligase;protein_id=WP_000130056.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 83233 84063 . + . ID=gene-AD08_RS21475;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=AD08_RS21475;old_locus_tag=AD08_0074 NZ_JHDJ01000104.1 Protein Homology CDS 83233 84063 . + 0 ID=cds-WP_000075748.1;Parent=gene-AD08_RS21475;Dbxref=Genbank:WP_000075748.1;Name=WP_000075748.1;gbkey=CDS;gene=ftsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414635.1;locus_tag=AD08_RS21475;product=cell division protein FtsQ;protein_id=WP_000075748.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 84060 85322 . + . ID=gene-AD08_RS21470;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=AD08_RS21470;old_locus_tag=AD08_0075 NZ_JHDJ01000104.1 Protein Homology CDS 84060 85322 . + 0 ID=cds-WP_001425111.1;Parent=gene-AD08_RS21470;Dbxref=Genbank:WP_001425111.1;Name=WP_001425111.1;gbkey=CDS;gene=ftsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374018.1;locus_tag=AD08_RS21470;product=cell division protein FtsA;protein_id=WP_001425111.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 85383 86534 . + . ID=gene-AD08_RS21465;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=AD08_RS21465;old_locus_tag=AD08_0076 NZ_JHDJ01000104.1 Protein Homology CDS 85383 86534 . + 0 ID=cds-WP_000462776.1;Parent=gene-AD08_RS21465;Dbxref=Genbank:WP_000462776.1;Name=WP_000462776.1;gbkey=CDS;gene=ftsZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=AD08_RS21465;product=cell division protein FtsZ;protein_id=WP_000462776.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 86635 87552 . + . ID=gene-AD08_RS21460;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=AD08_RS21460;old_locus_tag=AD08_0077 NZ_JHDJ01000104.1 Protein Homology CDS 86635 87552 . + 0 ID=cds-WP_000595482.1;Parent=gene-AD08_RS21460;Dbxref=Genbank:WP_000595482.1;Name=WP_000595482.1;gbkey=CDS;gene=lpxC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595491.1;locus_tag=AD08_RS21460;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595482.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 87783 88295 . + . ID=gene-AD08_RS21455;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=AD08_RS21455;old_locus_tag=AD08_0078 NZ_JHDJ01000104.1 Protein Homology CDS 87783 88295 . + 0 ID=cds-WP_000014321.1;Parent=gene-AD08_RS21455;Dbxref=Genbank:WP_000014321.1;Name=WP_000014321.1;gbkey=CDS;gene=secM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414639.2;locus_tag=AD08_RS21455;product=secA regulator SecM;protein_id=WP_000014321.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 88357 91062 . + . ID=gene-AD08_RS21450;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=AD08_RS21450;old_locus_tag=AD08_0079 NZ_JHDJ01000104.1 Protein Homology CDS 88357 91062 . + 0 ID=cds-WP_000905789.1;Parent=gene-AD08_RS21450;Dbxref=Genbank:WP_000905789.1;Name=WP_000905789.1;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414640.1;locus_tag=AD08_RS21450;product=preprotein translocase subunit SecA;protein_id=WP_000905789.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 91122 91511 . + . ID=gene-AD08_RS21445;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=AD08_RS21445;old_locus_tag=AD08_0080 NZ_JHDJ01000104.1 Protein Homology CDS 91122 91511 . + 0 ID=cds-WP_000736007.1;Parent=gene-AD08_RS21445;Dbxref=Genbank:WP_000736007.1;Name=WP_000736007.1;gbkey=CDS;gene=mutT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414641.1;locus_tag=AD08_RS21445;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736007.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 91727 91924 . - . ID=gene-AD08_RS21440;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=AD08_RS21440;old_locus_tag=AD08_0081 NZ_JHDJ01000104.1 Protein Homology CDS 91727 91924 . - 0 ID=cds-WP_000005042.1;Parent=gene-AD08_RS21440;Dbxref=Genbank:WP_000005042.1;Name=WP_000005042.1;gbkey=CDS;gene=yacG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308132.1;locus_tag=AD08_RS21440;product=DNA gyrase inhibitor YacG;protein_id=WP_000005042.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 91934 92677 . - . ID=gene-AD08_RS21435;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=AD08_RS21435;old_locus_tag=AD08_0082 NZ_JHDJ01000104.1 Protein Homology CDS 91934 92677 . - 0 ID=cds-WP_001381398.1;Parent=gene-AD08_RS21435;Dbxref=Genbank:WP_001381398.1;Name=WP_001381398.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414644.1;locus_tag=AD08_RS21435;product=cell division protein ZapD;protein_id=WP_001381398.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 92677 93297 . - . ID=gene-AD08_RS21430;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=AD08_RS21430;old_locus_tag=AD08_0083 NZ_JHDJ01000104.1 Protein Homology CDS 92677 93297 . - 0 ID=cds-WP_001269520.1;Parent=gene-AD08_RS21430;Dbxref=Genbank:WP_001269520.1;Name=WP_001269520.1;gbkey=CDS;gene=coaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308134.1;locus_tag=AD08_RS21430;product=dephospho-CoA kinase;protein_id=WP_001269520.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 93522 94565 . + . ID=gene-AD08_RS21425;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=AD08_RS21425;old_locus_tag=AD08_0084 NZ_JHDJ01000104.1 Protein Homology CDS 93522 94565 . + 0 ID=cds-WP_001217338.1;Parent=gene-AD08_RS21425;Dbxref=Genbank:WP_001217338.1;Name=WP_001217338.1;gbkey=CDS;gene=guaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=AD08_RS21425;product=GMP reductase;protein_id=WP_001217338.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 94600 95802 . - . ID=gene-AD08_RS21420;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=AD08_RS21420;old_locus_tag=AD08_0085 NZ_JHDJ01000104.1 Protein Homology CDS 94600 95802 . - 0 ID=cds-WP_000157266.1;Parent=gene-AD08_RS21420;Dbxref=Genbank:WP_000157266.1;Name=WP_000157266.1;gbkey=CDS;gene=hofC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414648.1;locus_tag=AD08_RS21420;product=protein transport protein HofC;protein_id=WP_000157266.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 95792 97177 . - . ID=gene-AD08_RS21415;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AD08_RS21415;old_locus_tag=AD08_0086 NZ_JHDJ01000104.1 Protein Homology CDS 95792 97177 . - 0 ID=cds-WP_001025145.1;Parent=gene-AD08_RS21415;Dbxref=Genbank:WP_001025145.1;Name=WP_001025145.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414649.1;locus_tag=AD08_RS21415;product=type II secretion system protein GspE;protein_id=WP_001025145.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 97187 97627 . - . ID=gene-AD08_RS21410;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=AD08_RS21410;old_locus_tag=AD08_0087 NZ_JHDJ01000104.1 Protein Homology CDS 97187 97627 . - 0 ID=cds-WP_000360904.1;Parent=gene-AD08_RS21410;Dbxref=Genbank:WP_000360904.1;Name=WP_000360904.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414650.1;locus_tag=AD08_RS21410;product=prepilin peptidase-dependent pilin;protein_id=WP_000360904.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 97830 98723 . - . ID=gene-AD08_RS21405;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=AD08_RS21405;old_locus_tag=AD08_0088 NZ_JHDJ01000104.1 Protein Homology CDS 97830 98723 . - 0 ID=cds-WP_001135174.1;Parent=gene-AD08_RS21405;Dbxref=Genbank:WP_001135174.1;Name=WP_001135174.1;gbkey=CDS;gene=nadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414651.1;locus_tag=AD08_RS21405;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135174.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 98811 99362 . + . ID=gene-AD08_RS21400;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=AD08_RS21400;old_locus_tag=AD08_0089 NZ_JHDJ01000104.1 Protein Homology CDS 98811 99362 . + 0 ID=cds-WP_000923721.1;Parent=gene-AD08_RS21400;Dbxref=Genbank:WP_000923721.1;Name=WP_000923721.1;gbkey=CDS;gene=ampD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414652.1;locus_tag=AD08_RS21400;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000923721.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 99359 100213 . + . ID=gene-AD08_RS21395;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=AD08_RS21395;old_locus_tag=AD08_0090 NZ_JHDJ01000104.1 Protein Homology CDS 99359 100213 . + 0 ID=cds-WP_001371446.1;Parent=gene-AD08_RS21395;Dbxref=Genbank:WP_001371446.1;Name=WP_001371446.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414653.1;locus_tag=AD08_RS21395;product=beta-lactamase regulator AmpE;protein_id=WP_001371446.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 100256 101629 . - . ID=gene-AD08_RS21390;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=AD08_RS21390;old_locus_tag=AD08_0091 NZ_JHDJ01000104.1 Protein Homology CDS 100256 101629 . - 0 ID=cds-WP_000969915.1;Parent=gene-AD08_RS21390;Dbxref=Genbank:WP_000969915.1;Name=WP_000969915.1;gbkey=CDS;gene=aroP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414654.1;locus_tag=AD08_RS21390;product=aromatic amino acid transporter AroP;protein_id=WP_000969915.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 102170 102934 . + . ID=gene-AD08_RS21385;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=AD08_RS21385;old_locus_tag=AD08_0092 NZ_JHDJ01000104.1 Protein Homology CDS 102170 102934 . + 0 ID=cds-WP_000331776.1;Parent=gene-AD08_RS21385;Dbxref=Genbank:WP_000331776.1;Name=WP_000331776.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308144.1;locus_tag=AD08_RS21385;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331776.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 103095 105758 . + . ID=gene-AD08_RS21380;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AD08_RS21380;old_locus_tag=AD08_0093 NZ_JHDJ01000104.1 Protein Homology CDS 103095 105758 . + 0 ID=cds-WP_000003820.1;Parent=gene-AD08_RS21380;Dbxref=Genbank:WP_000003820.1;Name=WP_000003820.1;gbkey=CDS;gene=aceE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308145.1;locus_tag=AD08_RS21380;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003820.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 105773 107665 . + . ID=gene-AD08_RS21375;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=AD08_RS21375;old_locus_tag=AD08_0094 NZ_JHDJ01000104.1 Protein Homology CDS 105773 107665 . + 0 ID=cds-WP_032217989.1;Parent=gene-AD08_RS21375;Dbxref=Genbank:WP_032217989.1;Name=WP_032217989.1;gbkey=CDS;gene=aceF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414657.1;locus_tag=AD08_RS21375;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_032217989.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 107990 109414 . + . ID=gene-AD08_RS21370;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=AD08_RS21370;old_locus_tag=AD08_0095 NZ_JHDJ01000104.1 Protein Homology CDS 107990 109414 . + 0 ID=cds-WP_000102485.1;Parent=gene-AD08_RS21370;Dbxref=Genbank:WP_000102485.1;Name=WP_000102485.1;gbkey=CDS;gene=lpdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308147.1;locus_tag=AD08_RS21370;product=dihydrolipoyl dehydrogenase;protein_id=WP_000102485.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 109485 111338 . - . ID=gene-AD08_RS21365;Name=AD08_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21365;old_locus_tag=AD08_0096 NZ_JHDJ01000104.1 Protein Homology CDS 109485 111338 . - 0 ID=cds-WP_032217991.1;Parent=gene-AD08_RS21365;Dbxref=Genbank:WP_032217991.1;Name=WP_032217991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414659.1;locus_tag=AD08_RS21365;product=DUF3300 domain-containing protein;protein_id=WP_032217991.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 111693 114290 . + . ID=gene-AD08_RS21360;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=AD08_RS21360;old_locus_tag=AD08_0098 NZ_JHDJ01000104.1 Protein Homology CDS 111693 114290 . + 0 ID=cds-WP_001307570.1;Parent=gene-AD08_RS21360;Dbxref=Genbank:WP_001307570.1;Name=WP_001307570.1;gbkey=CDS;gene=acnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414660.1;locus_tag=AD08_RS21360;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_001307570.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 114466 114828 . + . ID=gene-AD08_RS21355;Name=AD08_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21355;old_locus_tag=AD08_0099 NZ_JHDJ01000104.1 Protein Homology CDS 114466 114828 . + 0 ID=cds-WP_000384306.1;Parent=gene-AD08_RS21355;Dbxref=Genbank:WP_000384306.1;Name=WP_000384306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414661.2;locus_tag=AD08_RS21355;product=YacL family protein;protein_id=WP_000384306.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 114866 115660 . - . ID=gene-AD08_RS21350;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=AD08_RS21350;old_locus_tag=AD08_0100 NZ_JHDJ01000104.1 Protein Homology CDS 114866 115660 . - 0 ID=cds-WP_000734287.1;Parent=gene-AD08_RS21350;Dbxref=Genbank:WP_000734287.1;Name=WP_000734287.1;gbkey=CDS;gene=speD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308151.1;locus_tag=AD08_RS21350;product=adenosylmethionine decarboxylase;protein_id=WP_000734287.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 115676 116542 . - . ID=gene-AD08_RS21345;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=AD08_RS21345;old_locus_tag=AD08_0101 NZ_JHDJ01000104.1 Protein Homology CDS 115676 116542 . - 0 ID=cds-WP_000818411.1;Parent=gene-AD08_RS21345;Dbxref=Genbank:WP_000818411.1;Name=WP_000818411.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414663.1;locus_tag=AD08_RS21345;product=polyamine aminopropyltransferase;protein_id=WP_000818411.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 116648 116995 . - . ID=gene-AD08_RS21340;Name=AD08_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21340;old_locus_tag=AD08_0102 NZ_JHDJ01000104.1 Protein Homology CDS 116648 116995 . - 0 ID=cds-WP_001295568.1;Parent=gene-AD08_RS21340;Dbxref=Genbank:WP_001295568.1;Name=WP_001295568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414664.4;locus_tag=AD08_RS21340;product=YacC family pilotin-like protein;protein_id=WP_001295568.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 117161 118711 . + . ID=gene-AD08_RS21335;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=AD08_RS21335;old_locus_tag=AD08_0103 NZ_JHDJ01000104.1 Protein Homology CDS 117161 118711 . + 0 ID=cds-WP_032217994.1;Parent=gene-AD08_RS21335;Dbxref=Genbank:WP_032217994.1;Name=WP_032217994.1;gbkey=CDS;gene=cueO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414665.1;locus_tag=AD08_RS21335;product=multicopper oxidase CueO;protein_id=WP_032217994.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 118913 121303 . - . ID=gene-AD08_RS21330;Name=AD08_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21330;old_locus_tag=AD08_0104 NZ_JHDJ01000104.1 Protein Homology CDS 118913 121303 . - 0 ID=cds-WP_032217996.1;Parent=gene-AD08_RS21330;Dbxref=Genbank:WP_032217996.1;Name=WP_032217996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414666.1;locus_tag=AD08_RS21330;product=quinoprotein glucose dehydrogenase;protein_id=WP_032217996.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 121509 122045 . + . ID=gene-AD08_RS21325;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=AD08_RS21325;old_locus_tag=AD08_0105 NZ_JHDJ01000104.1 Protein Homology CDS 121509 122045 . + 0 ID=cds-WP_000683335.1;Parent=gene-AD08_RS21325;Dbxref=Genbank:WP_000683335.1;Name=WP_000683335.1;gbkey=CDS;gene=hpt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308156.2;locus_tag=AD08_RS21325;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683335.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 122086 122748 . - . ID=gene-AD08_RS21320;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=AD08_RS21320;old_locus_tag=AD08_0106 NZ_JHDJ01000104.1 Protein Homology CDS 122086 122748 . - 0 ID=cds-WP_000651599.1;Parent=gene-AD08_RS21320;Dbxref=Genbank:WP_000651599.1;Name=WP_000651599.1;gbkey=CDS;gene=can;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414668.1;locus_tag=AD08_RS21320;product=carbonate dehydratase;protein_id=WP_000651599.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 122857 123783 . + . ID=gene-AD08_RS21315;Name=AD08_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21315;old_locus_tag=AD08_0107 NZ_JHDJ01000104.1 Protein Homology CDS 122857 123783 . + 0 ID=cds-WP_000150637.1;Parent=gene-AD08_RS21315;Dbxref=Genbank:WP_000150637.1;Name=WP_000150637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414669.1;locus_tag=AD08_RS21315;product=ABC transporter ATP-binding protein;protein_id=WP_000150637.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 123780 124550 . + . ID=gene-AD08_RS21310;Name=AD08_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21310;old_locus_tag=AD08_0108 NZ_JHDJ01000104.1 Protein Homology CDS 123780 124550 . + 0 ID=cds-WP_000972203.1;Parent=gene-AD08_RS21310;Dbxref=Genbank:WP_000972203.1;Name=WP_000972203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=AD08_RS21310;product=ABC transporter permease;protein_id=WP_000972203.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 124655 125095 . + . ID=gene-AD08_RS21305;Name=AD08_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21305;old_locus_tag=AD08_0109 NZ_JHDJ01000104.1 Protein Homology CDS 124655 125095 . + 0 ID=cds-WP_001463140.1;Parent=gene-AD08_RS21305;Dbxref=Genbank:WP_001463140.1;Name=WP_001463140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414671.1;locus_tag=AD08_RS21305;product=PTS sugar transporter subunit IIA;protein_id=WP_001463140.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 125159 126388 . + . ID=gene-AD08_RS21300;Name=AD08_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21300;old_locus_tag=AD08_0110 NZ_JHDJ01000104.1 Protein Homology CDS 125159 126388 . + 0 ID=cds-WP_000277917.1;Parent=gene-AD08_RS21300;Dbxref=Genbank:WP_000277917.1;Name=WP_000277917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414672.1;locus_tag=AD08_RS21300;product=polysaccharide deacetylase family protein;protein_id=WP_000277917.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 126392 126772 . - . ID=gene-AD08_RS21295;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=AD08_RS21295;old_locus_tag=AD08_0111 NZ_JHDJ01000104.1 Protein Homology CDS 126392 126772 . - 0 ID=cds-WP_000621515.1;Parent=gene-AD08_RS21295;Dbxref=Genbank:WP_000621515.1;Name=WP_000621515.1;gbkey=CDS;gene=panD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=AD08_RS21295;product=aspartate 1-decarboxylase;protein_id=WP_000621515.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 127046 127948 . + . ID=gene-AD08_RS21290;Name=AD08_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21290;old_locus_tag=AD08_0113 NZ_JHDJ01000104.1 Protein Homology CDS 127046 127948 . + 0 ID=cds-WP_000339954.1;Parent=gene-AD08_RS21290;Dbxref=Genbank:WP_000339954.1;Name=WP_000339954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414674.1;locus_tag=AD08_RS21290;product=recombination-promoting nuclease RpnC;protein_id=WP_000339954.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 128022 128873 . - . ID=gene-AD08_RS21285;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=AD08_RS21285;old_locus_tag=AD08_0114 NZ_JHDJ01000104.1 Protein Homology CDS 128022 128873 . - 0 ID=cds-WP_000905383.1;Parent=gene-AD08_RS21285;Dbxref=Genbank:WP_000905383.1;Name=WP_000905383.1;gbkey=CDS;gene=panC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414675.1;locus_tag=AD08_RS21285;product=pantoate--beta-alanine ligase;protein_id=WP_000905383.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 128885 129679 . - . ID=gene-AD08_RS21280;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=AD08_RS21280;old_locus_tag=AD08_0115 NZ_JHDJ01000104.1 Protein Homology CDS 128885 129679 . - 0 ID=cds-WP_000805497.1;Parent=gene-AD08_RS21280;Dbxref=Genbank:WP_000805497.1;Name=WP_000805497.1;gbkey=CDS;gene=panB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414676.1;locus_tag=AD08_RS21280;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000805497.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 129793 131031 . - . ID=gene-AD08_RS21275;Name=yadC;gbkey=Gene;gene=yadC;gene_biotype=protein_coding;locus_tag=AD08_RS21275;old_locus_tag=AD08_0116 NZ_JHDJ01000104.1 Protein Homology CDS 129793 131031 . - 0 ID=cds-WP_000848455.1;Parent=gene-AD08_RS21275;Dbxref=Genbank:WP_000848455.1;Name=WP_000848455.1;gbkey=CDS;gene=yadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414677.1;locus_tag=AD08_RS21275;product=fimbrial tip-adhesin YadC;protein_id=WP_000848455.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 131081 131677 . - . ID=gene-AD08_RS21270;Name=AD08_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21270;old_locus_tag=AD08_0117 NZ_JHDJ01000104.1 Protein Homology CDS 131081 131677 . - 0 ID=cds-WP_000553749.1;Parent=gene-AD08_RS21270;Dbxref=Genbank:WP_000553749.1;Name=WP_000553749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414678.1;locus_tag=AD08_RS21270;product=fimbrial protein;protein_id=WP_000553749.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 131704 132309 . - . ID=gene-AD08_RS21265;Name=yadL;gbkey=Gene;gene=yadL;gene_biotype=protein_coding;locus_tag=AD08_RS21265;old_locus_tag=AD08_0118 NZ_JHDJ01000104.1 Protein Homology CDS 131704 132309 . - 0 ID=cds-WP_075207316.1;Parent=gene-AD08_RS21265;Dbxref=Genbank:WP_075207316.1;Name=WP_075207316.1;gbkey=CDS;gene=yadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414679.1;locus_tag=AD08_RS21265;product=fimbrial-like protein YadL;protein_id=WP_075207316.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 132321 132890 . - . ID=gene-AD08_RS21260;Name=AD08_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21260;old_locus_tag=AD08_0119 NZ_JHDJ01000104.1 Protein Homology CDS 132321 132890 . - 0 ID=cds-WP_000598300.1;Parent=gene-AD08_RS21260;Dbxref=Genbank:WP_000598300.1;Name=WP_000598300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414680.4;locus_tag=AD08_RS21260;product=fimbrial protein;protein_id=WP_000598300.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 132907 135504 . - . ID=gene-AD08_RS21255;Name=htrE;gbkey=Gene;gene=htrE;gene_biotype=protein_coding;locus_tag=AD08_RS21255;old_locus_tag=AD08_0120 NZ_JHDJ01000104.1 Protein Homology CDS 132907 135504 . - 0 ID=cds-WP_032218002.1;Parent=gene-AD08_RS21255;Dbxref=Genbank:WP_032218002.1;Name=WP_032218002.1;gbkey=CDS;gene=htrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414681.1;locus_tag=AD08_RS21255;product=Yad fimbria usher protein HtrE;protein_id=WP_032218002.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 135539 136279 . - . ID=gene-AD08_RS21250;Name=AD08_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21250;old_locus_tag=AD08_0121 NZ_JHDJ01000104.1 Protein Homology CDS 135539 136279 . - 0 ID=cds-WP_000465928.1;Parent=gene-AD08_RS21250;Dbxref=Genbank:WP_000465928.1;Name=WP_000465928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414682.1;locus_tag=AD08_RS21250;product=fimbrial chaperone;protein_id=WP_000465928.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq gene 136377 136961 . - . ID=gene-AD08_RS21245;Name=AD08_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21245;old_locus_tag=AD08_0123 NZ_JHDJ01000104.1 Protein Homology CDS 136377 136961 . - 0 ID=cds-WP_000038438.1;Parent=gene-AD08_RS21245;Dbxref=Genbank:WP_000038438.1;Name=WP_000038438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414683.1;locus_tag=AD08_RS21245;product=fimbrial protein;protein_id=WP_000038438.1;transl_table=11 NZ_JHDJ01000104.1 RefSeq pseudogene 137199 137632 . - . ID=gene-AD08_RS21240;Name=AD08_RS21240;end_range=137632,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS21240;old_locus_tag=AD08_0124;partial=true;pseudo=true NZ_JHDJ01000104.1 Protein Homology CDS 137199 137632 . - 2 ID=cds-AD08_RS21240;Parent=gene-AD08_RS21240;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=137632,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS21240;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000105.1 1 59754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000105.1 RefSeq region 1 59754 . + . ID=NZ_JHDJ01000105.1:1..59754;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000105.1 RefSeq gene 181 2715 . + . ID=gene-AD08_RS21235;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=AD08_RS21235;old_locus_tag=AD08_0126 NZ_JHDJ01000105.1 Protein Homology CDS 181 2715 . + 0 ID=cds-WP_000918162.1;Parent=gene-AD08_RS21235;Dbxref=Genbank:WP_000918162.1;Name=WP_000918162.1;gbkey=CDS;gene=mrcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414691.1;locus_tag=AD08_RS21235;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918162.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 2935 5178 . + . ID=gene-AD08_RS21230;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=AD08_RS21230;old_locus_tag=AD08_0128 NZ_JHDJ01000105.1 Protein Homology CDS 2935 5178 . + 0 ID=cds-WP_032218012.1;Parent=gene-AD08_RS21230;Dbxref=Genbank:WP_032218012.1;Name=WP_032218012.1;gbkey=CDS;gene=fhuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414692.1;locus_tag=AD08_RS21230;product=ferrichrome porin FhuA;protein_id=WP_032218012.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 5229 6026 . + . ID=gene-AD08_RS21225;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=AD08_RS21225;old_locus_tag=AD08_0129 NZ_JHDJ01000105.1 Protein Homology CDS 5229 6026 . + 0 ID=cds-WP_001158931.1;Parent=gene-AD08_RS21225;Dbxref=Genbank:WP_001158931.1;Name=WP_001158931.1;gbkey=CDS;gene=fhuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414693.1;locus_tag=AD08_RS21225;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001158931.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 6026 6916 . + . ID=gene-AD08_RS21220;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=AD08_RS21220;old_locus_tag=AD08_0130 NZ_JHDJ01000105.1 Protein Homology CDS 6026 6916 . + 0 ID=cds-WP_001310529.1;Parent=gene-AD08_RS21220;Dbxref=Genbank:WP_001310529.1;Name=WP_001310529.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414694.1;locus_tag=AD08_RS21220;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_001310529.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 6913 8895 . + . ID=gene-AD08_RS21215;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=AD08_RS21215;old_locus_tag=AD08_0131 NZ_JHDJ01000105.1 Protein Homology CDS 6913 8895 . + 0 ID=cds-WP_001637427.1;Parent=gene-AD08_RS21215;Dbxref=Genbank:WP_001637427.1;Name=WP_001637427.1;gbkey=CDS;gene=fhuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414695.1;locus_tag=AD08_RS21215;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_001637427.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 9053 10333 . - . ID=gene-AD08_RS21210;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=AD08_RS21210;old_locus_tag=AD08_0132 NZ_JHDJ01000105.1 Protein Homology CDS 9053 10333 . - 0 ID=cds-WP_000045305.1;Parent=gene-AD08_RS21210;Dbxref=Genbank:WP_000045305.1;Name=WP_000045305.1;gbkey=CDS;gene=hemL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=AD08_RS21210;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045305.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 10558 11979 . + . ID=gene-AD08_RS21205;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=AD08_RS21205;old_locus_tag=AD08_0133 NZ_JHDJ01000105.1 Protein Homology CDS 10558 11979 . + 0 ID=cds-WP_000845394.1;Parent=gene-AD08_RS21205;Dbxref=Genbank:WP_000845394.1;Name=WP_000845394.1;gbkey=CDS;gene=clcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414697.1;locus_tag=AD08_RS21205;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845394.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 12003 12068 . + . ID=gene-AD08_RS31570;Name=AD08_RS31570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31570 NZ_JHDJ01000105.1 Protein Homology CDS 12003 12068 . + 0 ID=cds-WP_120795373.1;Parent=gene-AD08_RS31570;Dbxref=Genbank:WP_120795373.1;Name=WP_120795373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518738.1;locus_tag=AD08_RS31570;product=protein YadW;protein_id=WP_120795373.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 12061 12405 . + . ID=gene-AD08_RS21200;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=AD08_RS21200;old_locus_tag=AD08_0134 NZ_JHDJ01000105.1 Protein Homology CDS 12061 12405 . + 0 ID=cds-WP_001295564.1;Parent=gene-AD08_RS21200;Dbxref=Genbank:WP_001295564.1;Name=WP_001295564.1;gbkey=CDS;gene=erpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=AD08_RS21200;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001295564.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 12452 13075 . - . ID=gene-AD08_RS21195;Name=AD08_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21195;old_locus_tag=AD08_0135 NZ_JHDJ01000105.1 Protein Homology CDS 12452 13075 . - 0 ID=cds-WP_000964221.1;Parent=gene-AD08_RS21195;Dbxref=Genbank:WP_000964221.1;Name=WP_000964221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414699.1;locus_tag=AD08_RS21195;product=TRIC cation channel family protein;protein_id=WP_000964221.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 13113 13913 . - . ID=gene-AD08_RS21190;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=AD08_RS21190;old_locus_tag=AD08_0136 NZ_JHDJ01000105.1 Protein Homology CDS 13113 13913 . - 0 ID=cds-WP_001129927.1;Parent=gene-AD08_RS21190;Dbxref=Genbank:WP_001129927.1;Name=WP_001129927.1;gbkey=CDS;gene=btuF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414700.1;locus_tag=AD08_RS21190;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001129927.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 13906 14604 . - . ID=gene-AD08_RS21185;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=AD08_RS21185;old_locus_tag=AD08_0137 NZ_JHDJ01000105.1 Protein Homology CDS 13906 14604 . - 0 ID=cds-WP_000689844.1;Parent=gene-AD08_RS21185;Dbxref=Genbank:WP_000689844.1;Name=WP_000689844.1;gbkey=CDS;gene=mtnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308190.1;locus_tag=AD08_RS21185;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689844.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 14688 16205 . + . ID=gene-AD08_RS21180;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=AD08_RS21180;old_locus_tag=AD08_0138 NZ_JHDJ01000105.1 Protein Homology CDS 14688 16205 . + 0 ID=cds-WP_000057067.1;Parent=gene-AD08_RS21180;Dbxref=Genbank:WP_000057067.1;Name=WP_000057067.1;gbkey=CDS;gene=dgt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414702.1;locus_tag=AD08_RS21180;product=dGTPase;protein_id=WP_000057067.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 16335 17759 . + . ID=gene-AD08_RS21175;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=AD08_RS21175;old_locus_tag=AD08_0139 NZ_JHDJ01000105.1 Protein Homology CDS 16335 17759 . + 0 ID=cds-WP_000753946.1;Parent=gene-AD08_RS21175;Dbxref=Genbank:WP_000753946.1;Name=WP_000753946.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308192.1;locus_tag=AD08_RS21175;product=serine endoprotease DegP;protein_id=WP_000753946.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 17914 19071 . + . ID=gene-AD08_RS21170;Name=AD08_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21170;old_locus_tag=AD08_0140 NZ_JHDJ01000105.1 Protein Homology CDS 17914 19071 . + 0 ID=cds-WP_000929443.1;Parent=gene-AD08_RS21170;Dbxref=Genbank:WP_000929443.1;Name=WP_000929443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414704.4;locus_tag=AD08_RS21170;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929443.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 19160 19546 . - . ID=gene-AD08_RS21165;Name=AD08_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21165;old_locus_tag=AD08_0141 NZ_JHDJ01000105.1 Protein Homology CDS 19160 19546 . - 0 ID=cds-WP_000272188.1;Parent=gene-AD08_RS21165;Dbxref=Genbank:WP_000272188.1;Name=WP_000272188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=AD08_RS21165;product=DUF3461 family protein;protein_id=WP_000272188.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 19708 20520 . - . ID=gene-AD08_RS21160;Name=yaeI;gbkey=Gene;gene=yaeI;gene_biotype=protein_coding;locus_tag=AD08_RS21160;old_locus_tag=AD08_0142 NZ_JHDJ01000105.1 Protein Homology CDS 19708 20520 . - 0 ID=cds-WP_000625631.1;Parent=gene-AD08_RS21160;Dbxref=Genbank:WP_000625631.1;Name=WP_000625631.1;gbkey=CDS;gene=yaeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414706.2;locus_tag=AD08_RS21160;product=phosphodiesterase YaeI;protein_id=WP_000625631.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 20574 21398 . - . ID=gene-AD08_RS21155;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=AD08_RS21155;old_locus_tag=AD08_0143 NZ_JHDJ01000105.1 Protein Homology CDS 20574 21398 . - 0 ID=cds-WP_001186650.1;Parent=gene-AD08_RS21155;Dbxref=Genbank:WP_001186650.1;Name=WP_001186650.1;gbkey=CDS;gene=dapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=AD08_RS21155;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186650.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 21429 24101 . - . ID=gene-AD08_RS21150;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=AD08_RS21150;old_locus_tag=AD08_0144 NZ_JHDJ01000105.1 Protein Homology CDS 21429 24101 . - 0 ID=cds-WP_032175995.1;Parent=gene-AD08_RS21150;Dbxref=Genbank:WP_032175995.1;Name=WP_032175995.1;gbkey=CDS;gene=glnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414709.1;locus_tag=AD08_RS21150;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_032175995.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 24163 24957 . - . ID=gene-AD08_RS21145;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AD08_RS21145;old_locus_tag=AD08_0145 NZ_JHDJ01000105.1 Protein Homology CDS 24163 24957 . - 0 ID=cds-WP_032218018.1;Parent=gene-AD08_RS21145;Dbxref=Genbank:WP_032218018.1;Name=WP_032218018.1;gbkey=CDS;gene=map;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308197.1;locus_tag=AD08_RS21145;product=type I methionyl aminopeptidase;protein_id=WP_032218018.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 25325 26050 . + . ID=gene-AD08_RS21140;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=AD08_RS21140;old_locus_tag=AD08_0146 NZ_JHDJ01000105.1 Protein Homology CDS 25325 26050 . + 0 ID=cds-WP_000246882.1;Parent=gene-AD08_RS21140;Dbxref=Genbank:WP_000246882.1;Name=WP_000246882.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=AD08_RS21140;product=30S ribosomal protein S2;protein_id=WP_000246882.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 26308 27159 . + . ID=gene-AD08_RS21135;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AD08_RS21135;old_locus_tag=AD08_0148 NZ_JHDJ01000105.1 Protein Homology CDS 26308 27159 . + 0 ID=cds-WP_000818114.1;Parent=gene-AD08_RS21135;Dbxref=Genbank:WP_000818114.1;Name=WP_000818114.1;gbkey=CDS;gene=tsf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308199.1;locus_tag=AD08_RS21135;product=elongation factor Ts;protein_id=WP_000818114.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 27306 28031 . + . ID=gene-AD08_RS21130;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=AD08_RS21130;old_locus_tag=AD08_0149 NZ_JHDJ01000105.1 Protein Homology CDS 27306 28031 . + 0 ID=cds-WP_000224573.1;Parent=gene-AD08_RS21130;Dbxref=Genbank:WP_000224573.1;Name=WP_000224573.1;gbkey=CDS;gene=pyrH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=AD08_RS21130;product=UMP kinase;protein_id=WP_000224573.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 28323 28880 . + . ID=gene-AD08_RS21125;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=AD08_RS21125;old_locus_tag=AD08_0150 NZ_JHDJ01000105.1 Protein Homology CDS 28323 28880 . + 0 ID=cds-WP_000622418.1;Parent=gene-AD08_RS21125;Dbxref=Genbank:WP_000622418.1;Name=WP_000622418.1;gbkey=CDS;gene=frr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=AD08_RS21125;product=ribosome recycling factor;protein_id=WP_000622418.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 28972 30168 . + . ID=gene-AD08_RS21120;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=AD08_RS21120;old_locus_tag=AD08_0151 NZ_JHDJ01000105.1 Protein Homology CDS 28972 30168 . + 0 ID=cds-WP_000811923.1;Parent=gene-AD08_RS21120;Dbxref=Genbank:WP_000811923.1;Name=WP_000811923.1;gbkey=CDS;gene=ispC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414715.1;locus_tag=AD08_RS21120;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811923.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 30356 31114 . + . ID=gene-AD08_RS21115;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=AD08_RS21115;old_locus_tag=AD08_0152 NZ_JHDJ01000105.1 Protein Homology CDS 30356 31114 . + 0 ID=cds-WP_001295562.1;Parent=gene-AD08_RS21115;Dbxref=Genbank:WP_001295562.1;Name=WP_001295562.1;gbkey=CDS;gene=ispU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308203.2;locus_tag=AD08_RS21115;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_001295562.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 31127 31984 . + . ID=gene-AD08_RS21110;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=AD08_RS21110;old_locus_tag=AD08_0154 NZ_JHDJ01000105.1 Protein Homology CDS 31127 31984 . + 0 ID=cds-WP_000922446.1;Parent=gene-AD08_RS21110;Dbxref=Genbank:WP_000922446.1;Name=WP_000922446.1;gbkey=CDS;gene=cdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414717.2;locus_tag=AD08_RS21110;product=phosphatidate cytidylyltransferase;protein_id=WP_000922446.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 31996 33348 . + . ID=gene-AD08_RS21105;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=AD08_RS21105;old_locus_tag=AD08_0155 NZ_JHDJ01000105.1 Protein Homology CDS 31996 33348 . + 0 ID=cds-WP_001295561.1;Parent=gene-AD08_RS21105;Dbxref=Genbank:WP_001295561.1;Name=WP_001295561.1;gbkey=CDS;gene=rseP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308205.1;locus_tag=AD08_RS21105;product=sigma E protease regulator RseP;protein_id=WP_001295561.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 33378 35810 . + . ID=gene-AD08_RS21100;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=AD08_RS21100;old_locus_tag=AD08_0156 NZ_JHDJ01000105.1 Protein Homology CDS 33378 35810 . + 0 ID=cds-WP_001240896.1;Parent=gene-AD08_RS21100;Dbxref=Genbank:WP_001240896.1;Name=WP_001240896.1;gbkey=CDS;gene=bamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=AD08_RS21100;product=outer membrane protein assembly factor BamA;protein_id=WP_001240896.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 35932 36417 . + . ID=gene-AD08_RS21095;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=AD08_RS21095;old_locus_tag=AD08_0157 NZ_JHDJ01000105.1 Protein Homology CDS 35932 36417 . + 0 ID=cds-WP_000758956.1;Parent=gene-AD08_RS21095;Dbxref=Genbank:WP_000758956.1;Name=WP_000758956.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308207.1;locus_tag=AD08_RS21095;product=molecular chaperone Skp;protein_id=WP_000758956.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 36421 37446 . + . ID=gene-AD08_RS21090;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=AD08_RS21090;old_locus_tag=AD08_0158 NZ_JHDJ01000105.1 Protein Homology CDS 36421 37446 . + 0 ID=cds-WP_001139279.1;Parent=gene-AD08_RS21090;Dbxref=Genbank:WP_001139279.1;Name=WP_001139279.1;gbkey=CDS;gene=lpxD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=AD08_RS21090;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139279.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 37551 38006 . + . ID=gene-AD08_RS21085;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=AD08_RS21085;old_locus_tag=AD08_0159 NZ_JHDJ01000105.1 Protein Homology CDS 37551 38006 . + 0 ID=cds-WP_000210739.1;Parent=gene-AD08_RS21085;Dbxref=Genbank:WP_000210739.1;Name=WP_000210739.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=AD08_RS21085;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210739.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 38010 38798 . + . ID=gene-AD08_RS21080;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=AD08_RS21080;old_locus_tag=AD08_0160 NZ_JHDJ01000105.1 Protein Homology CDS 38010 38798 . + 0 ID=cds-WP_000565966.1;Parent=gene-AD08_RS21080;Dbxref=Genbank:WP_000565966.1;Name=WP_000565966.1;gbkey=CDS;gene=lpxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=AD08_RS21080;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565966.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 38798 39946 . + . ID=gene-AD08_RS21075;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=AD08_RS21075;old_locus_tag=AD08_0161 NZ_JHDJ01000105.1 Protein Homology CDS 38798 39946 . + 0 ID=cds-WP_032218025.1;Parent=gene-AD08_RS21075;Dbxref=Genbank:WP_032218025.1;Name=WP_032218025.1;gbkey=CDS;gene=lpxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414724.1;locus_tag=AD08_RS21075;product=lipid-A-disaccharide synthase;protein_id=WP_032218025.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 39943 40539 . + . ID=gene-AD08_RS21070;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=AD08_RS21070;old_locus_tag=AD08_0162 NZ_JHDJ01000105.1 Protein Homology CDS 39943 40539 . + 0 ID=cds-WP_000569430.1;Parent=gene-AD08_RS21070;Dbxref=Genbank:WP_000569430.1;Name=WP_000569430.1;gbkey=CDS;gene=rnhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414725.1;locus_tag=AD08_RS21070;product=ribonuclease HII;protein_id=WP_000569430.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 40576 44058 . + . ID=gene-AD08_RS21065;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AD08_RS21065;old_locus_tag=AD08_0163 NZ_JHDJ01000105.1 Protein Homology CDS 40576 44058 . + 0 ID=cds-WP_001294757.1;Parent=gene-AD08_RS21065;Dbxref=Genbank:WP_001294757.1;Name=WP_001294757.1;gbkey=CDS;gene=dnaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414726.1;locus_tag=AD08_RS21065;product=DNA polymerase III subunit alpha;protein_id=WP_001294757.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 44071 45030 . + . ID=gene-AD08_RS21060;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=AD08_RS21060;old_locus_tag=AD08_0164 NZ_JHDJ01000105.1 Protein Homology CDS 44071 45030 . + 0 ID=cds-WP_000055741.1;Parent=gene-AD08_RS21060;Dbxref=Genbank:WP_000055741.1;Name=WP_000055741.1;gbkey=CDS;gene=accA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=AD08_RS21060;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055741.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 45129 47270 . + . ID=gene-AD08_RS21055;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=AD08_RS21055;old_locus_tag=AD08_0165 NZ_JHDJ01000105.1 Protein Homology CDS 45129 47270 . + 0 ID=cds-WP_001736870.1;Parent=gene-AD08_RS21055;Dbxref=Genbank:WP_001736870.1;Name=WP_001736870.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414728.1;locus_tag=AD08_RS21055;product=lysine decarboxylase LdcC;protein_id=WP_001736870.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 47327 47716 . + . ID=gene-AD08_RS21050;Name=AD08_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21050;old_locus_tag=AD08_0166 NZ_JHDJ01000105.1 Protein Homology CDS 47327 47716 . + 0 ID=cds-WP_000901099.1;Parent=gene-AD08_RS21050;Dbxref=Genbank:WP_000901099.1;Name=WP_000901099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414729.4;locus_tag=AD08_RS21050;product=VOC family protein;protein_id=WP_000901099.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 47781 49079 . + . ID=gene-AD08_RS21045;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=AD08_RS21045;old_locus_tag=AD08_0167 NZ_JHDJ01000105.1 Protein Homology CDS 47781 49079 . + 0 ID=cds-WP_032218032.1;Parent=gene-AD08_RS21045;Dbxref=Genbank:WP_032218032.1;Name=WP_032218032.1;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414730.1;locus_tag=AD08_RS21045;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_032218032.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 49128 49388 . - . ID=gene-AD08_RS21040;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=AD08_RS21040;old_locus_tag=AD08_0168 NZ_JHDJ01000105.1 Protein Homology CDS 49128 49388 . - 0 ID=cds-WP_000062312.1;Parent=gene-AD08_RS21040;Dbxref=Genbank:WP_000062312.1;Name=WP_000062312.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706134.1;locus_tag=AD08_RS21040;product=Rho-binding antiterminator;protein_id=WP_000062312.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 49375 49575 . - . ID=gene-AD08_RS21035;Name=AD08_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21035;old_locus_tag=AD08_0169 NZ_JHDJ01000105.1 Protein Homology CDS 49375 49575 . - 0 ID=cds-WP_000417058.1;Parent=gene-AD08_RS21035;Dbxref=Genbank:WP_000417058.1;Name=WP_000417058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=AD08_RS21035;product=YaeP family protein;protein_id=WP_000417058.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 49741 50286 . + . ID=gene-AD08_RS21030;Name=AD08_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21030;old_locus_tag=AD08_0170 NZ_JHDJ01000105.1 Protein Homology CDS 49741 50286 . + 0 ID=cds-WP_032218034.1;Parent=gene-AD08_RS21030;Dbxref=Genbank:WP_032218034.1;Name=WP_032218034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414732.1;locus_tag=AD08_RS21030;product=YaeQ family protein;protein_id=WP_032218034.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 50283 50705 . + . ID=gene-AD08_RS21025;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=AD08_RS21025;old_locus_tag=AD08_0171 NZ_JHDJ01000105.1 Protein Homology CDS 50283 50705 . + 0 ID=cds-WP_000635537.1;Parent=gene-AD08_RS21025;Dbxref=Genbank:WP_000635537.1;Name=WP_000635537.1;gbkey=CDS;gene=arfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414733.1;locus_tag=AD08_RS21025;product=aminoacyl-tRNA hydrolase;protein_id=WP_000635537.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 50719 51429 . + . ID=gene-AD08_RS21020;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=AD08_RS21020;old_locus_tag=AD08_0172 NZ_JHDJ01000105.1 Protein Homology CDS 50719 51429 . + 0 ID=cds-WP_000239163.1;Parent=gene-AD08_RS21020;Dbxref=Genbank:WP_000239163.1;Name=WP_000239163.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414734.1;locus_tag=AD08_RS21020;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000239163.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 51629 52453 . - . ID=gene-AD08_RS21015;Name=AD08_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS21015;old_locus_tag=AD08_0173 NZ_JHDJ01000105.1 Protein Homology CDS 51629 52453 . - 0 ID=cds-WP_032218037.1;Parent=gene-AD08_RS21015;Dbxref=Genbank:WP_032218037.1;Name=WP_032218037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414735.4;locus_tag=AD08_RS21015;product=YaeF family permuted papain-like enzyme;protein_id=WP_032218037.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 52507 54225 . - . ID=gene-AD08_RS21010;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=AD08_RS21010;old_locus_tag=AD08_0174 NZ_JHDJ01000105.1 Protein Homology CDS 52507 54225 . - 0 ID=cds-WP_001260712.1;Parent=gene-AD08_RS21010;Dbxref=Genbank:WP_001260712.1;Name=WP_001260712.1;gbkey=CDS;gene=proS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=AD08_RS21010;product=proline--tRNA ligase;protein_id=WP_001260712.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 54337 55044 . - . ID=gene-AD08_RS21005;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=AD08_RS21005;old_locus_tag=AD08_0175 NZ_JHDJ01000105.1 Protein Homology CDS 54337 55044 . - 0 ID=cds-WP_000094011.1;Parent=gene-AD08_RS21005;Dbxref=Genbank:WP_000094011.1;Name=WP_000094011.1;gbkey=CDS;gene=tsaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414737.1;locus_tag=AD08_RS21005;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000094011.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 55041 55445 . - . ID=gene-AD08_RS21000;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=AD08_RS21000;old_locus_tag=AD08_0176 NZ_JHDJ01000105.1 Protein Homology CDS 55041 55445 . - 0 ID=cds-WP_001202329.1;Parent=gene-AD08_RS21000;Dbxref=Genbank:WP_001202329.1;Name=WP_001202329.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414738.1;locus_tag=AD08_RS21000;product=Rcs stress response system protein RcsF;protein_id=WP_001202329.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 55536 56378 . - . ID=gene-AD08_RS20995;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=AD08_RS20995;old_locus_tag=AD08_0177 NZ_JHDJ01000105.1 Protein Homology CDS 55536 56378 . - 0 ID=cds-WP_032218040.1;Parent=gene-AD08_RS20995;Dbxref=Genbank:WP_032218040.1;Name=WP_032218040.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001460459.1;locus_tag=AD08_RS20995;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_032218040.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 56418 57071 . - . ID=gene-AD08_RS20990;Name=metI;gbkey=Gene;gene=metI;gene_biotype=protein_coding;locus_tag=AD08_RS20990;old_locus_tag=AD08_0178 NZ_JHDJ01000105.1 Protein Homology CDS 56418 57071 . - 0 ID=cds-WP_001294600.1;Parent=gene-AD08_RS20990;Dbxref=Genbank:WP_001294600.1;Name=WP_001294600.1;gbkey=CDS;gene=metI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=AD08_RS20990;product=methionine ABC transporter permease MetI;protein_id=WP_001294600.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 57064 58095 . - . ID=gene-AD08_RS20985;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=AD08_RS20985;old_locus_tag=AD08_0179 NZ_JHDJ01000105.1 Protein Homology CDS 57064 58095 . - 0 ID=cds-WP_000594006.1;Parent=gene-AD08_RS20985;Dbxref=Genbank:WP_000594006.1;Name=WP_000594006.1;gbkey=CDS;gene=metN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=AD08_RS20985;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594006.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 58283 58858 . + . ID=gene-AD08_RS20980;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=AD08_RS20980;old_locus_tag=AD08_0180 NZ_JHDJ01000105.1 Protein Homology CDS 58283 58858 . + 0 ID=cds-WP_032218044.1;Parent=gene-AD08_RS20980;Dbxref=Genbank:WP_032218044.1;Name=WP_032218044.1;gbkey=CDS;gene=gmhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308229.1;locus_tag=AD08_RS20980;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_032218044.1;transl_table=11 NZ_JHDJ01000105.1 RefSeq gene 59221 59754 . + . ID=gene-AD08_RS0124905;Name=AD08_RS0124905;end_range=59754,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS0124905;partial=true NZ_JHDJ01000105.1 RefSeq rRNA 59221 59754 . + . ID=rna-AD08_RS0124905;Parent=gene-AD08_RS0124905;end_range=59754,.;gbkey=rRNA;locus_tag=AD08_RS0124905;partial=true;product=16S ribosomal RNA NZ_JHDJ01000105.1 RefSeq exon 59221 59754 . + . ID=exon-AD08_RS0124905-1;Parent=rna-AD08_RS0124905;end_range=59754,.;gbkey=rRNA;locus_tag=AD08_RS0124905;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDJ01000106.1 1 486 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000106.1 RefSeq region 1 486 . + . ID=NZ_JHDJ01000106.1:1..486;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000106.1 RefSeq gene 1 486 . + . ID=gene-AD08_RS0124910;Name=AD08_RS0124910;end_range=486,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS0124910;partial=true;start_range=.,1 NZ_JHDJ01000106.1 RefSeq rRNA 1 486 . + . ID=rna-AD08_RS0124910;Parent=gene-AD08_RS0124910;end_range=486,.;gbkey=rRNA;locus_tag=AD08_RS0124910;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDJ01000106.1 RefSeq exon 1 486 . + . ID=exon-AD08_RS0124910-1;Parent=rna-AD08_RS0124910;end_range=486,.;gbkey=rRNA;locus_tag=AD08_RS0124910;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JHDJ01000107.1 1 2205 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000107.1 RefSeq region 1 2205 . + . ID=NZ_JHDJ01000107.1:1..2205;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000107.1 RefSeq gene 1 2058 . + . ID=gene-AD08_RS0124915;Name=AD08_RS0124915;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS0124915;partial=true;start_range=.,1 NZ_JHDJ01000107.1 RefSeq rRNA 1 2058 . + . ID=rna-AD08_RS0124915;Parent=gene-AD08_RS0124915;gbkey=rRNA;locus_tag=AD08_RS0124915;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDJ01000107.1 RefSeq exon 1 2058 . + . ID=exon-AD08_RS0124915-1;Parent=rna-AD08_RS0124915;gbkey=rRNA;locus_tag=AD08_RS0124915;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDJ01000107.1 RefSeq gene 2136 2205 . + . ID=gene-AD08_RS0124920;Name=rrf;end_range=2205,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD08_RS0124920;partial=true NZ_JHDJ01000107.1 cmsearch rRNA 2136 2205 . + . ID=rna-AD08_RS0124920;Parent=gene-AD08_RS0124920;Dbxref=RFAM:RF00001;end_range=2205,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS0124920;partial=true;product=5S ribosomal RNA NZ_JHDJ01000107.1 cmsearch exon 2136 2205 . + . ID=exon-AD08_RS0124920-1;Parent=rna-AD08_RS0124920;Dbxref=RFAM:RF00001;end_range=2205,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS0124920;partial=true;product=5S ribosomal RNA ##sequence-region NZ_JHDJ01000108.1 1 16954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000108.1 RefSeq region 1 16954 . + . ID=NZ_JHDJ01000108.1:1..16954;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000108.1 RefSeq gene 1 115 . + . ID=gene-AD08_RS20975;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD08_RS20975;old_locus_tag=AD08_0184 NZ_JHDJ01000108.1 cmsearch rRNA 1 115 . + . ID=rna-AD08_RS20975;Parent=gene-AD08_RS20975;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS20975;product=5S ribosomal RNA NZ_JHDJ01000108.1 cmsearch exon 1 115 . + . ID=exon-AD08_RS20975-1;Parent=rna-AD08_RS20975;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS20975;product=5S ribosomal RNA NZ_JHDJ01000108.1 RefSeq gene 130 205 . + . ID=gene-AD08_RS20970;Name=AD08_RS20970;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS20970;old_locus_tag=AD08_0186 NZ_JHDJ01000108.1 tRNAscan-SE tRNA 130 205 . + . ID=rna-AD08_RS20970;Parent=gene-AD08_RS20970;anticodon=(pos:163..165);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS20970;product=tRNA-Thr NZ_JHDJ01000108.1 tRNAscan-SE exon 130 205 . + . ID=exon-AD08_RS20970-1;Parent=rna-AD08_RS20970;anticodon=(pos:163..165);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS20970;product=tRNA-Thr NZ_JHDJ01000108.1 RefSeq gene 245 360 . + . ID=gene-AD08_RS20965;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD08_RS20965;old_locus_tag=AD08_0187 NZ_JHDJ01000108.1 cmsearch rRNA 245 360 . + . ID=rna-AD08_RS20965;Parent=gene-AD08_RS20965;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS20965;product=5S ribosomal RNA NZ_JHDJ01000108.1 cmsearch exon 245 360 . + . ID=exon-AD08_RS20965-1;Parent=rna-AD08_RS20965;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS20965;product=5S ribosomal RNA NZ_JHDJ01000108.1 RefSeq gene 415 491 . + . ID=gene-AD08_RS20960;Name=AD08_RS20960;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS20960;old_locus_tag=AD08_0188 NZ_JHDJ01000108.1 tRNAscan-SE tRNA 415 491 . + . ID=rna-AD08_RS20960;Parent=gene-AD08_RS20960;anticodon=(pos:449..451);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS20960;product=tRNA-Asp NZ_JHDJ01000108.1 tRNAscan-SE exon 415 491 . + . ID=exon-AD08_RS20960-1;Parent=rna-AD08_RS20960;anticodon=(pos:449..451);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS20960;product=tRNA-Asp NZ_JHDJ01000108.1 RefSeq gene 654 1457 . + . ID=gene-AD08_RS20955;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=AD08_RS20955;old_locus_tag=AD08_0189 NZ_JHDJ01000108.1 Protein Homology CDS 654 1457 . + 0 ID=cds-WP_000997010.1;Parent=gene-AD08_RS20955;Dbxref=Genbank:WP_000997010.1;Name=WP_000997010.1;gbkey=CDS;gene=dkgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414743.1;locus_tag=AD08_RS20955;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_000997010.1;transl_table=11 NZ_JHDJ01000108.1 RefSeq gene 1454 2368 . - . ID=gene-AD08_RS20950;Name=AD08_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20950;old_locus_tag=AD08_0190 NZ_JHDJ01000108.1 Protein Homology CDS 1454 2368 . - 0 ID=cds-WP_000648572.1;Parent=gene-AD08_RS20950;Dbxref=Genbank:WP_000648572.1;Name=WP_000648572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414744.1;locus_tag=AD08_RS20950;product=LysR family transcriptional regulator;protein_id=WP_000648572.1;transl_table=11 NZ_JHDJ01000108.1 RefSeq gene 2609 3409 . + . ID=gene-AD08_RS20945;Name=AD08_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20945;old_locus_tag=AD08_0191 NZ_JHDJ01000108.1 Protein Homology CDS 2609 3409 . + 0 ID=cds-WP_001230983.1;Parent=gene-AD08_RS20945;Dbxref=Genbank:WP_001230983.1;Name=WP_001230983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=AD08_RS20945;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230983.1;transl_table=11 NZ_JHDJ01000108.1 RefSeq gene 3413 4036 . + . ID=gene-AD08_RS20940;Name=AD08_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20940;old_locus_tag=AD08_0192 NZ_JHDJ01000108.1 Protein Homology CDS 3413 4036 . + 0 ID=cds-WP_001641140.1;Parent=gene-AD08_RS20940;Dbxref=Genbank:WP_001641140.1;Name=WP_001641140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414746.1;locus_tag=AD08_RS20940;product=methyltransferase domain-containing protein;protein_id=WP_001641140.1;transl_table=11 NZ_JHDJ01000108.1 RefSeq gene 4084 5442 . - . ID=gene-AD08_RS20935;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=AD08_RS20935;old_locus_tag=AD08_0193 NZ_JHDJ01000108.1 Protein Homology CDS 4084 5442 . - 0 ID=cds-WP_000644685.1;Parent=gene-AD08_RS20935;Dbxref=Genbank:WP_000644685.1;Name=WP_000644685.1;gbkey=CDS;gene=mltD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414747.1;locus_tag=AD08_RS20935;product=murein transglycosylase D;protein_id=WP_000644685.1;transl_table=11 NZ_JHDJ01000108.1 RefSeq gene 5514 6269 . - . ID=gene-AD08_RS20930;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=AD08_RS20930;old_locus_tag=AD08_0194 NZ_JHDJ01000108.1 Protein Homology CDS 5514 6269 . - 0 ID=cds-WP_001052715.1;Parent=gene-AD08_RS20930;Dbxref=Genbank:WP_001052715.1;Name=WP_001052715.1;gbkey=CDS;gene=gloB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308235.1;locus_tag=AD08_RS20930;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052715.1;transl_table=11 NZ_JHDJ01000108.1 RefSeq gene 6303 7025 . + . ID=gene-AD08_RS20925;Name=AD08_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20925;old_locus_tag=AD08_0195 NZ_JHDJ01000108.1 Protein Homology CDS 6303 7025 . + 0 ID=cds-WP_001326702.1;Parent=gene-AD08_RS20925;Dbxref=Genbank:WP_001326702.1;Name=WP_001326702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414749.2;locus_tag=AD08_RS20925;product=class I SAM-dependent methyltransferase;protein_id=WP_001326702.1;transl_table=11 NZ_JHDJ01000108.1 RefSeq gene 7022 7489 . - . ID=gene-AD08_RS20920;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=AD08_RS20920;old_locus_tag=AD08_0196 NZ_JHDJ01000108.1 Protein Homology CDS 7022 7489 . - 0 ID=cds-WP_000917883.1;Parent=gene-AD08_RS20920;Dbxref=Genbank:WP_000917883.1;Name=WP_000917883.1;gbkey=CDS;gene=rnhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308237.1;locus_tag=AD08_RS20920;product=ribonuclease HI;protein_id=WP_000917883.1;transl_table=11 NZ_JHDJ01000108.1 RefSeq gene 7554 8285 . + . ID=gene-AD08_RS20915;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=AD08_RS20915;old_locus_tag=AD08_0197 NZ_JHDJ01000108.1 Protein Homology CDS 7554 8285 . + 0 ID=cds-WP_001340895.1;Parent=gene-AD08_RS20915;Dbxref=Genbank:WP_001340895.1;Name=WP_001340895.1;gbkey=CDS;gene=dnaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414751.1;locus_tag=AD08_RS20915;product=DNA polymerase III subunit epsilon;protein_id=WP_001340895.1;transl_table=11 NZ_JHDJ01000108.1 RefSeq gene 8418 8494 . + . ID=gene-AD08_RS20910;Name=AD08_RS20910;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS20910;old_locus_tag=AD08_0198 NZ_JHDJ01000108.1 tRNAscan-SE tRNA 8418 8494 . + . ID=rna-AD08_RS20910;Parent=gene-AD08_RS20910;anticodon=(pos:8452..8454);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS20910;product=tRNA-Asp NZ_JHDJ01000108.1 tRNAscan-SE exon 8418 8494 . + . ID=exon-AD08_RS20910-1;Parent=rna-AD08_RS20910;anticodon=(pos:8452..8454);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS20910;product=tRNA-Asp NZ_JHDJ01000108.1 RefSeq pseudogene 8671 9368 . - . ID=gene-AD08_RS20905;Name=AD08_RS20905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS20905;old_locus_tag=AD08_0199;pseudo=true NZ_JHDJ01000108.1 Protein Homology CDS 8671 9368 . - 0 ID=cds-AD08_RS20905;Parent=gene-AD08_RS20905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS20905;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_JHDJ01000108.1 RefSeq gene 9580 10059 . - . ID=gene-AD08_RS20900;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=AD08_RS20900;old_locus_tag=AD08_0200 NZ_JHDJ01000108.1 Protein Homology CDS 9580 10059 . - 0 ID=cds-WP_000215139.1;Parent=gene-AD08_RS20900;Dbxref=Genbank:WP_000215139.1;Name=WP_000215139.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414684.1;locus_tag=AD08_RS20900;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000215139.1;transl_table=11 NZ_JHDJ01000108.1 RefSeq gene 10056 11474 . - . ID=gene-AD08_RS20895;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=AD08_RS20895;old_locus_tag=AD08_0201 NZ_JHDJ01000108.1 Protein Homology CDS 10056 11474 . - 0 ID=cds-WP_000174643.1;Parent=gene-AD08_RS20895;Dbxref=Genbank:WP_000174643.1;Name=WP_000174643.1;gbkey=CDS;gene=pcnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000174652.1;locus_tag=AD08_RS20895;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_000174643.1;transl_table=11 NZ_JHDJ01000108.1 RefSeq gene 11513 12439 . - . ID=gene-AD08_RS20890;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=AD08_RS20890;old_locus_tag=AD08_0202 NZ_JHDJ01000108.1 Protein Homology CDS 11513 12439 . - 0 ID=cds-WP_000937424.1;Parent=gene-AD08_RS20890;Dbxref=Genbank:WP_000937424.1;Name=WP_000937424.1;gbkey=CDS;gene=gluQRS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414686.3;locus_tag=AD08_RS20890;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_000937424.1;transl_table=11 NZ_JHDJ01000108.1 RefSeq gene 12476 12931 . - . ID=gene-AD08_RS20885;Name=AD08_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20885;old_locus_tag=AD08_0203 NZ_JHDJ01000108.1 Protein Homology CDS 12476 12931 . - 0 ID=cds-WP_001155227.1;Parent=gene-AD08_RS20885;Dbxref=Genbank:WP_001155227.1;Name=WP_001155227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308176.1;locus_tag=AD08_RS20885;product=RNA polymerase-binding protein DksA;protein_id=WP_001155227.1;transl_table=11 NZ_JHDJ01000108.1 RefSeq gene 13109 13813 . - . ID=gene-AD08_RS20880;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=AD08_RS20880;old_locus_tag=AD08_0204 NZ_JHDJ01000108.1 Protein Homology CDS 13109 13813 . - 0 ID=cds-WP_000396036.1;Parent=gene-AD08_RS20880;Dbxref=Genbank:WP_000396036.1;Name=WP_000396036.1;gbkey=CDS;gene=sfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308177.1;locus_tag=AD08_RS20880;product=DNA/RNA nuclease SfsA;protein_id=WP_000396036.1;transl_table=11 NZ_JHDJ01000108.1 RefSeq gene 13828 14358 . - . ID=gene-AD08_RS20875;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=AD08_RS20875;old_locus_tag=AD08_0205 NZ_JHDJ01000108.1 Protein Homology CDS 13828 14358 . - 0 ID=cds-WP_001294700.1;Parent=gene-AD08_RS20875;Dbxref=Genbank:WP_001294700.1;Name=WP_001294700.1;gbkey=CDS;gene=thpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414689.4;locus_tag=AD08_RS20875;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294700.1;transl_table=11 NZ_JHDJ01000108.1 RefSeq gene 14432 16861 . + . ID=gene-AD08_RS20870;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=AD08_RS20870;old_locus_tag=AD08_0206 NZ_JHDJ01000108.1 Protein Homology CDS 14432 16861 . + 0 ID=cds-WP_032218054.1;Parent=gene-AD08_RS20870;Dbxref=Genbank:WP_032218054.1;Name=WP_032218054.1;gbkey=CDS;gene=hrpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=AD08_RS20870;product=ATP-dependent helicase HrpB;protein_id=WP_032218054.1;transl_table=11 ##sequence-region NZ_JHDJ01000109.1 1 16752 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000109.1 RefSeq region 1 16752 . + . ID=NZ_JHDJ01000109.1:1..16752;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000109.1 RefSeq gene 24 1160 . + . ID=gene-AD08_RS20865;Name=AD08_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20865;old_locus_tag=AD08_0207 NZ_JHDJ01000109.1 Protein Homology CDS 24 1160 . + 0 ID=cds-WP_000420818.1;Parent=gene-AD08_RS20865;Dbxref=Genbank:WP_000420818.1;Name=WP_000420818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD08_RS20865;product=ISAs1 family transposase;protein_id=WP_000420818.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq gene 1201 1971 . - . ID=gene-AD08_RS20860;Name=yafV;gbkey=Gene;gene=yafV;gene_biotype=protein_coding;locus_tag=AD08_RS20860;old_locus_tag=AD08_0208 NZ_JHDJ01000109.1 Protein Homology CDS 1201 1971 . - 0 ID=cds-WP_001118036.1;Parent=gene-AD08_RS20860;Dbxref=Genbank:WP_001118036.1;Name=WP_001118036.1;gbkey=CDS;gene=yafV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414754.1;locus_tag=AD08_RS20860;product=2-oxoglutaramate amidase;protein_id=WP_001118036.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq gene 2125 2598 . + . ID=gene-AD08_RS20855;Name=ivy;gbkey=Gene;gene=ivy;gene_biotype=protein_coding;locus_tag=AD08_RS20855;old_locus_tag=AD08_0209 NZ_JHDJ01000109.1 Protein Homology CDS 2125 2598 . + 0 ID=cds-WP_000532698.1;Parent=gene-AD08_RS20855;Dbxref=Genbank:WP_000532698.1;Name=WP_000532698.1;gbkey=CDS;gene=ivy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414755.1;locus_tag=AD08_RS20855;product=C-lysozyme inhibitor;protein_id=WP_000532698.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq gene 2641 5085 . - . ID=gene-AD08_RS20850;Name=AD08_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20850;old_locus_tag=AD08_0210 NZ_JHDJ01000109.1 Protein Homology CDS 2641 5085 . - 0 ID=cds-WP_000973083.1;Parent=gene-AD08_RS20850;Dbxref=Genbank:WP_000973083.1;Name=WP_000973083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414756.2;locus_tag=AD08_RS20850;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973083.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq gene 5325 5903 . + . ID=gene-AD08_RS20845;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=AD08_RS20845;old_locus_tag=AD08_0211 NZ_JHDJ01000109.1 Protein Homology CDS 5325 5903 . + 0 ID=cds-WP_000284050.1;Parent=gene-AD08_RS20845;Dbxref=Genbank:WP_000284050.1;Name=WP_000284050.1;gbkey=CDS;gene=lpcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458774.1;locus_tag=AD08_RS20845;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284050.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq gene 6109 6876 . + . ID=gene-AD08_RS20840;Name=AD08_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20840;old_locus_tag=AD08_0212 NZ_JHDJ01000109.1 Protein Homology CDS 6109 6876 . + 0 ID=cds-WP_032218057.1;Parent=gene-AD08_RS20840;Dbxref=Genbank:WP_032218057.1;Name=WP_032218057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414758.1;locus_tag=AD08_RS20840;product=class II glutamine amidotransferase;protein_id=WP_032218057.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq gene 6847 7587 . - . ID=gene-AD08_RS20835;Name=AD08_RS20835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20835;old_locus_tag=AD08_0213 NZ_JHDJ01000109.1 Protein Homology CDS 6847 7587 . - 0 ID=cds-WP_001225679.1;Parent=gene-AD08_RS20835;Dbxref=Genbank:WP_001225679.1;Name=WP_001225679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308278.1;locus_tag=AD08_RS20835;product=murein L%2CD-transpeptidase;protein_id=WP_001225679.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq gene 7743 8021 . - . ID=gene-AD08_RS0124925;Name=yafQ;gbkey=Gene;gene=yafQ;gene_biotype=protein_coding;locus_tag=AD08_RS0124925 NZ_JHDJ01000109.1 Protein Homology CDS 7743 8021 . - 0 ID=cds-WP_000615983.1;Parent=gene-AD08_RS0124925;Dbxref=Genbank:WP_000615983.1;Name=WP_000615983.1;gbkey=CDS;gene=yafQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414760.1;locus_tag=AD08_RS0124925;product=type II toxin-antitoxin system mRNA interferase toxin YafQ;protein_id=WP_000615983.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq gene 8024 8284 . - . ID=gene-AD08_RS20830;Name=dinJ;gbkey=Gene;gene=dinJ;gene_biotype=protein_coding;locus_tag=AD08_RS20830;old_locus_tag=AD08_0215 NZ_JHDJ01000109.1 Protein Homology CDS 8024 8284 . - 0 ID=cds-WP_000729703.1;Parent=gene-AD08_RS20830;Dbxref=Genbank:WP_000729703.1;Name=WP_000729703.1;gbkey=CDS;gene=dinJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414761.1;locus_tag=AD08_RS20830;product=type II toxin-antitoxin system antitoxin DinJ;protein_id=WP_000729703.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq gene 8494 9243 . + . ID=gene-AD08_RS20825;Name=AD08_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20825;old_locus_tag=AD08_0217 NZ_JHDJ01000109.1 Protein Homology CDS 8494 9243 . + 0 ID=cds-WP_000056849.1;Parent=gene-AD08_RS20825;Dbxref=Genbank:WP_000056849.1;Name=WP_000056849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414762.1;locus_tag=AD08_RS20825;product=C40 family peptidase;protein_id=WP_000056849.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq gene 9419 9916 . + . ID=gene-AD08_RS20820;Name=rayT;gbkey=Gene;gene=rayT;gene_biotype=protein_coding;locus_tag=AD08_RS20820;old_locus_tag=AD08_0218 NZ_JHDJ01000109.1 Protein Homology CDS 9419 9916 . + 0 ID=cds-WP_000006255.1;Parent=gene-AD08_RS20820;Dbxref=Genbank:WP_000006255.1;Name=WP_000006255.1;gbkey=CDS;gene=rayT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414763.1;locus_tag=AD08_RS20820;product=REP-associated tyrosine transposase RayT;protein_id=WP_000006255.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq gene 10140 12233 . - . ID=gene-AD08_RS20815;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AD08_RS20815;old_locus_tag=AD08_0219 NZ_JHDJ01000109.1 Protein Homology CDS 10140 12233 . - 0 ID=cds-WP_032218060.1;Parent=gene-AD08_RS20815;Dbxref=Genbank:WP_032218060.1;Name=WP_032218060.1;gbkey=CDS;gene=flhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140833.1;locus_tag=AD08_RS20815;product=flagellar biosynthesis protein FlhA;protein_id=WP_032218060.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq gene 12217 13356 . - . ID=gene-AD08_RS20810;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=AD08_RS20810;old_locus_tag=AD08_0220 NZ_JHDJ01000109.1 Protein Homology CDS 12217 13356 . - 0 ID=cds-WP_000785661.1;Parent=gene-AD08_RS20810;Dbxref=Genbank:WP_000785661.1;Name=WP_000785661.1;gbkey=CDS;gene=flhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019076069.1;locus_tag=AD08_RS20810;product=flagellar type III secretion system protein FlhB;protein_id=WP_000785661.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq gene 13346 14128 . - . ID=gene-AD08_RS20805;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=AD08_RS20805;old_locus_tag=AD08_0221 NZ_JHDJ01000109.1 Protein Homology CDS 13346 14128 . - 0 ID=cds-WP_001260503.1;Parent=gene-AD08_RS20805;Dbxref=Genbank:WP_001260503.1;Name=WP_001260503.1;gbkey=CDS;gene=fliR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904607.1;locus_tag=AD08_RS20805;product=flagellar biosynthetic protein FliR;protein_id=WP_001260503.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq gene 14130 14402 . - . ID=gene-AD08_RS20800;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=AD08_RS20800;old_locus_tag=AD08_0222 NZ_JHDJ01000109.1 Protein Homology CDS 14130 14402 . - 0 ID=cds-WP_000958542.1;Parent=gene-AD08_RS20800;Dbxref=Genbank:WP_000958542.1;Name=WP_000958542.1;gbkey=CDS;gene=fliQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003838859.1;locus_tag=AD08_RS20800;product=flagellar type III secretion system protein FliQ;protein_id=WP_000958542.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq gene 14405 15157 . - . ID=gene-AD08_RS20795;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=AD08_RS20795;old_locus_tag=AD08_0223 NZ_JHDJ01000109.1 Protein Homology CDS 14405 15157 . - 0 ID=cds-WP_000830273.1;Parent=gene-AD08_RS20795;Dbxref=Genbank:WP_000830273.1;Name=WP_000830273.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;gbkey=CDS;gene=fliP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016149597.1;locus_tag=AD08_RS20795;product=flagellar type III secretion system pore protein FliP;protein_id=WP_000830273.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq gene 15154 15525 . - . ID=gene-AD08_RS20790;Name=AD08_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20790;old_locus_tag=AD08_0224 NZ_JHDJ01000109.1 Protein Homology CDS 15154 15525 . - 0 ID=cds-WP_000043127.1;Parent=gene-AD08_RS20790;Dbxref=Genbank:WP_000043127.1;Name=WP_000043127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233859.1;locus_tag=AD08_RS20790;product=hypothetical protein;protein_id=WP_000043127.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq gene 15518 16267 . - . ID=gene-AD08_RS20785;Name=AD08_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20785;old_locus_tag=AD08_0225 NZ_JHDJ01000109.1 Protein Homology CDS 15518 16267 . - 0 ID=cds-WP_001340882.1;Parent=gene-AD08_RS20785;Dbxref=Genbank:WP_001340882.1;Name=WP_001340882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001412592.1;locus_tag=AD08_RS20785;product=FliM/FliN family flagellar motor switch protein;protein_id=WP_001340882.1;transl_table=11 NZ_JHDJ01000109.1 RefSeq pseudogene 16334 16752 . + . ID=gene-AD08_RS0124930;Name=AD08_RS0124930;end_range=16752,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0124930;partial=true;pseudo=true NZ_JHDJ01000109.1 Protein Homology CDS 16334 16752 . + 0 ID=cds-AD08_RS0124930;Parent=gene-AD08_RS0124930;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=16752,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS0124930;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000110.1 1 48869 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000110.1 RefSeq region 1 48869 . + . ID=NZ_JHDJ01000110.1:1..48869;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000110.1 RefSeq pseudogene 1 464 . + . ID=gene-AD08_RS20780;Name=AD08_RS20780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS20780;old_locus_tag=AD08_0227;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000110.1 Protein Homology CDS 1 464 . + 2 ID=cds-AD08_RS20780;Parent=gene-AD08_RS20780;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS20780;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 965 1951 . + . ID=gene-AD08_RS20775;Name=AD08_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20775;old_locus_tag=AD08_0228 NZ_JHDJ01000110.1 Protein Homology CDS 965 1951 . + 0 ID=cds-WP_032218068.1;Parent=gene-AD08_RS20775;Dbxref=Genbank:WP_032218068.1;Name=WP_032218068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016151826.1;locus_tag=AD08_RS20775;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_032218068.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 1966 2307 . + . ID=gene-AD08_RS20770;Name=AD08_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20770;old_locus_tag=AD08_0229 NZ_JHDJ01000110.1 Protein Homology CDS 1966 2307 . + 0 ID=cds-WP_000029089.1;Parent=gene-AD08_RS20770;Dbxref=Genbank:WP_000029089.1;Name=WP_000029089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538312.1;locus_tag=AD08_RS20770;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000029089.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 2312 3958 . + . ID=gene-AD08_RS20765;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=AD08_RS20765;old_locus_tag=AD08_0230 NZ_JHDJ01000110.1 Protein Homology CDS 2312 3958 . + 0 ID=cds-WP_000993693.1;Parent=gene-AD08_RS20765;Dbxref=Genbank:WP_000993693.1;Name=WP_000993693.1;gbkey=CDS;gene=fliF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019076073.1;locus_tag=AD08_RS20765;product=flagellar M-ring protein FliF;protein_id=WP_000993693.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 3936 4946 . + . ID=gene-AD08_RS20760;Name=AD08_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20760;old_locus_tag=AD08_0231 NZ_JHDJ01000110.1 Protein Homology CDS 3936 4946 . + 0 ID=cds-WP_001654012.1;Parent=gene-AD08_RS20760;Dbxref=Genbank:WP_001654012.1;Name=WP_001654012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006685955.1;locus_tag=AD08_RS20760;product=flagellar motor switch protein FliG;protein_id=WP_001654012.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 4950 5660 . + . ID=gene-AD08_RS20755;Name=AD08_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20755;old_locus_tag=AD08_0232 NZ_JHDJ01000110.1 Protein Homology CDS 4950 5660 . + 0 ID=cds-WP_000151519.1;Parent=gene-AD08_RS20755;Dbxref=Genbank:WP_000151519.1;Name=WP_000151519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019076074.1;locus_tag=AD08_RS20755;product=flagellar assembly protein H;protein_id=WP_000151519.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 5653 6990 . + . ID=gene-AD08_RS20750;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=AD08_RS20750;old_locus_tag=AD08_0233 NZ_JHDJ01000110.1 Protein Homology CDS 5653 6990 . + 0 ID=cds-WP_001529457.1;Parent=gene-AD08_RS20750;Dbxref=Genbank:WP_001529457.1;Name=WP_001529457.1;gbkey=CDS;gene=fliI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279390.1;locus_tag=AD08_RS20750;product=flagellar protein export ATPase FliI;protein_id=WP_001529457.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 6993 7427 . + . ID=gene-AD08_RS20745;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=AD08_RS20745;old_locus_tag=AD08_0234 NZ_JHDJ01000110.1 Protein Homology CDS 6993 7427 . + 0 ID=cds-WP_001248924.1;Parent=gene-AD08_RS20745;Dbxref=Genbank:WP_001248924.1;Name=WP_001248924.1;gbkey=CDS;gene=fliJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248915.1;locus_tag=AD08_RS20745;product=flagellar export protein FliJ;protein_id=WP_001248924.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 7430 7825 . + . ID=gene-AD08_RS20740;Name=AD08_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20740;old_locus_tag=AD08_0235 NZ_JHDJ01000110.1 Protein Homology CDS 7430 7825 . + 0 ID=cds-WP_000859525.1;Parent=gene-AD08_RS20740;Dbxref=Genbank:WP_000859525.1;Name=WP_000859525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001637450.1;locus_tag=AD08_RS20740;product=adenylyltransferase/cytidyltransferase family protein;protein_id=WP_000859525.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 7943 10387 . - . ID=gene-AD08_RS20735;Name=AD08_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20735;old_locus_tag=AD08_0236 NZ_JHDJ01000110.1 Protein Homology CDS 7943 10387 . - 0 ID=cds-WP_032218072.1;Parent=gene-AD08_RS20735;Dbxref=Genbank:WP_032218072.1;Name=WP_032218072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001412594.1;locus_tag=AD08_RS20735;product=glycosyltransferase;protein_id=WP_032218072.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 10566 11495 . - . ID=gene-AD08_RS20730;Name=AD08_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20730;old_locus_tag=AD08_0237 NZ_JHDJ01000110.1 Protein Homology CDS 10566 11495 . - 0 ID=cds-WP_000008089.1;Parent=gene-AD08_RS20730;Dbxref=Genbank:WP_000008089.1;Name=WP_000008089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008086.1;locus_tag=AD08_RS20730;product=hypothetical protein;protein_id=WP_000008089.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 11623 12051 . - . ID=gene-AD08_RS20725;Name=AD08_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20725;old_locus_tag=AD08_0238 NZ_JHDJ01000110.1 Protein Homology CDS 11623 12051 . - 0 ID=cds-WP_000027810.1;Parent=gene-AD08_RS20725;Dbxref=Genbank:WP_000027810.1;Name=WP_000027810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001329715.1;locus_tag=AD08_RS20725;product=flagellar protein FlgN;protein_id=WP_000027810.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 12064 12342 . - . ID=gene-AD08_RS20720;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=AD08_RS20720;old_locus_tag=AD08_0239 NZ_JHDJ01000110.1 Protein Homology CDS 12064 12342 . - 0 ID=cds-WP_000705406.1;Parent=gene-AD08_RS20720;Dbxref=Genbank:WP_000705406.1;Name=WP_000705406.1;gbkey=CDS;gene=flgM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000705216.1;locus_tag=AD08_RS20720;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000705406.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 12423 13160 . - . ID=gene-AD08_RS20715;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=AD08_RS20715;old_locus_tag=AD08_0240 NZ_JHDJ01000110.1 Protein Homology CDS 12423 13160 . - 0 ID=cds-WP_000009747.1;Parent=gene-AD08_RS20715;Dbxref=Genbank:WP_000009747.1;Name=WP_000009747.1;gbkey=CDS;gene=flgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233868.1;locus_tag=AD08_RS20715;product=flagellar basal body P-ring formation protein FlgA;protein_id=WP_000009747.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 13242 13577 . + . ID=gene-AD08_RS20710;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=AD08_RS20710;old_locus_tag=AD08_0241 NZ_JHDJ01000110.1 Protein Homology CDS 13242 13577 . + 0 ID=cds-WP_000512950.1;Parent=gene-AD08_RS20710;Dbxref=Genbank:WP_000512950.1;Name=WP_000512950.1;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Yersinia has 2 copies of flgB and other flagellar genes;gbkey=CDS;gene=flgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003838822.1;locus_tag=AD08_RS20710;product=flagellar biosynthesis protein FlgB;protein_id=WP_000512950.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 13580 14011 . + . ID=gene-AD08_RS20705;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=AD08_RS20705;old_locus_tag=AD08_0242 NZ_JHDJ01000110.1 Protein Homology CDS 13580 14011 . + 0 ID=cds-WP_000010940.1;Parent=gene-AD08_RS20705;Dbxref=Genbank:WP_000010940.1;Name=WP_000010940.1;gbkey=CDS;gene=flgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000010944.1;locus_tag=AD08_RS20705;product=flagellar basal body rod protein FlgC;protein_id=WP_000010940.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 14011 14724 . + . ID=gene-AD08_RS20700;Name=AD08_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20700;old_locus_tag=AD08_0243 NZ_JHDJ01000110.1 Protein Homology CDS 14011 14724 . + 0 ID=cds-WP_032218074.1;Parent=gene-AD08_RS20700;Dbxref=Genbank:WP_032218074.1;Name=WP_032218074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001508388.1;locus_tag=AD08_RS20700;product=flagellar hook capping protein;protein_id=WP_032218074.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 14868 16070 . + . ID=gene-AD08_RS20695;Name=flaE;gbkey=Gene;gene=flaE;gene_biotype=protein_coding;locus_tag=AD08_RS20695;old_locus_tag=AD08_0244 NZ_JHDJ01000110.1 Protein Homology CDS 14868 16070 . + 0 ID=cds-WP_000119528.1;Parent=gene-AD08_RS20695;Dbxref=Genbank:WP_000119528.1;Name=WP_000119528.1;gbkey=CDS;gene=flaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904671.1;locus_tag=AD08_RS20695;product=flagellar basal body protein FlaE;protein_id=WP_000119528.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 16070 16807 . + . ID=gene-AD08_RS20690;Name=AD08_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20690;old_locus_tag=AD08_0245 NZ_JHDJ01000110.1 Protein Homology CDS 16070 16807 . + 0 ID=cds-WP_000375447.1;Parent=gene-AD08_RS20690;Dbxref=Genbank:WP_000375447.1;Name=WP_000375447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375458.1;locus_tag=AD08_RS20690;product=flagellar basal body rod protein FlgF;protein_id=WP_000375447.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 16886 17671 . + . ID=gene-AD08_RS20685;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=AD08_RS20685;old_locus_tag=AD08_0246 NZ_JHDJ01000110.1 Protein Homology CDS 16886 17671 . + 0 ID=cds-WP_000990538.1;Parent=gene-AD08_RS20685;Dbxref=Genbank:WP_000990538.1;Name=WP_000990538.1;gbkey=CDS;gene=flgG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003838810.1;locus_tag=AD08_RS20685;product=flagellar basal-body rod protein FlgG;protein_id=WP_000990538.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 17875 18540 . + . ID=gene-AD08_RS20680;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=AD08_RS20680;old_locus_tag=AD08_0247 NZ_JHDJ01000110.1 Protein Homology CDS 17875 18540 . + 0 ID=cds-WP_000800868.1;Parent=gene-AD08_RS20680;Dbxref=Genbank:WP_000800868.1;Name=WP_000800868.1;gbkey=CDS;gene=flgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800870.1;locus_tag=AD08_RS20680;product=flagellar basal body L-ring protein FlgH;protein_id=WP_000800868.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 18555 19655 . + . ID=gene-AD08_RS20675;Name=AD08_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20675;old_locus_tag=AD08_0248 NZ_JHDJ01000110.1 Protein Homology CDS 18555 19655 . + 0 ID=cds-WP_001181897.1;Parent=gene-AD08_RS20675;Dbxref=Genbank:WP_001181897.1;Name=WP_001181897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016151847.1;locus_tag=AD08_RS20675;product=flagellar basal body P-ring protein FlgI;protein_id=WP_001181897.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 19655 19954 . + . ID=gene-AD08_RS20670;Name=AD08_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20670;old_locus_tag=AD08_0249 NZ_JHDJ01000110.1 Protein Homology CDS 19655 19954 . + 0 ID=cds-WP_000867284.1-2;Parent=gene-AD08_RS20670;Dbxref=Genbank:WP_000867284.1;Name=WP_000867284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000867283.1;locus_tag=AD08_RS20670;product=rod-binding protein;protein_id=WP_000867284.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 20612 21988 . + . ID=gene-AD08_RS20665;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=AD08_RS20665;old_locus_tag=AD08_0251 NZ_JHDJ01000110.1 Protein Homology CDS 20612 21988 . + 0 ID=cds-WP_000367218.1;Parent=gene-AD08_RS20665;Dbxref=Genbank:WP_000367218.1;Name=WP_000367218.1;gbkey=CDS;gene=flgK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000367241.1;locus_tag=AD08_RS20665;product=flagellar hook-associated protein FlgK;protein_id=WP_000367218.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 22003 22932 . + . ID=gene-AD08_RS20660;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=AD08_RS20660;old_locus_tag=AD08_0252 NZ_JHDJ01000110.1 Protein Homology CDS 22003 22932 . + 0 ID=cds-WP_001266792.1;Parent=gene-AD08_RS20660;Dbxref=Genbank:WP_001266792.1;Name=WP_001266792.1;gbkey=CDS;gene=flgL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003838800.1;locus_tag=AD08_RS20660;product=flagellar hook-associated protein 3;protein_id=WP_001266792.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 22949 23926 . + . ID=gene-AD08_RS20655;Name=AD08_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20655;old_locus_tag=AD08_0253 NZ_JHDJ01000110.1 Protein Homology CDS 22949 23926 . + 0 ID=cds-WP_001195955.1;Parent=gene-AD08_RS20655;Dbxref=Genbank:WP_001195955.1;Name=WP_001195955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195949.1;locus_tag=AD08_RS20655;product=hypothetical protein;protein_id=WP_001195955.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 23985 24827 . - . ID=gene-AD08_RS20650;Name=AD08_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20650;old_locus_tag=AD08_0254 NZ_JHDJ01000110.1 Protein Homology CDS 23985 24827 . - 0 ID=cds-WP_000022372.1;Parent=gene-AD08_RS20650;Dbxref=Genbank:WP_000022372.1;Name=WP_000022372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022370.1;locus_tag=AD08_RS20650;product=CadC family transcriptional regulator;protein_id=WP_000022372.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 25313 26227 . + . ID=gene-AD08_RS20645;Name=lafA;gbkey=Gene;gene=lafA;gene_biotype=protein_coding;locus_tag=AD08_RS20645;old_locus_tag=AD08_0255 NZ_JHDJ01000110.1 Protein Homology CDS 25313 26227 . + 0 ID=cds-WP_000949080.1;Parent=gene-AD08_RS20645;Dbxref=Genbank:WP_000949080.1;Name=WP_000949080.1;gbkey=CDS;gene=lafA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003843798.1;locus_tag=AD08_RS20645;product=lateral flagellin LafA;protein_id=WP_000949080.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 26518 27828 . + . ID=gene-AD08_RS20640;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=AD08_RS20640;old_locus_tag=AD08_0256 NZ_JHDJ01000110.1 Protein Homology CDS 26518 27828 . + 0 ID=cds-WP_032218078.1;Parent=gene-AD08_RS20640;Dbxref=Genbank:WP_032218078.1;Name=WP_032218078.1;gbkey=CDS;gene=fliD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609688.1;locus_tag=AD08_RS20640;product=flagellar filament capping protein FliD;protein_id=WP_032218078.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 27851 28243 . + . ID=gene-AD08_RS20635;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=AD08_RS20635;old_locus_tag=AD08_0257 NZ_JHDJ01000110.1 Protein Homology CDS 27851 28243 . + 0 ID=cds-WP_000285319.1;Parent=gene-AD08_RS20635;Dbxref=Genbank:WP_000285319.1;Name=WP_000285319.1;gbkey=CDS;gene=fliS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003843794.1;locus_tag=AD08_RS20635;product=flagellar export chaperone FliS;protein_id=WP_000285319.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 28248 28559 . + . ID=gene-AD08_RS20630;Name=AD08_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20630;old_locus_tag=AD08_0258 NZ_JHDJ01000110.1 Protein Homology CDS 28248 28559 . + 0 ID=cds-WP_000414998.1;Parent=gene-AD08_RS20630;Dbxref=Genbank:WP_000414998.1;Name=WP_000414998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000414995.1;locus_tag=AD08_RS20630;product=hypothetical protein;protein_id=WP_000414998.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 28556 29617 . + . ID=gene-AD08_RS20625;Name=AD08_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20625;old_locus_tag=AD08_0259 NZ_JHDJ01000110.1 Protein Homology CDS 28556 29617 . + 0 ID=cds-WP_001067475.1;Parent=gene-AD08_RS20625;Dbxref=Genbank:WP_001067475.1;Name=WP_001067475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067462.1;locus_tag=AD08_RS20625;product=flagellar hook-length control protein FliK;protein_id=WP_001067475.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 29625 30092 . + . ID=gene-AD08_RS20620;Name=AD08_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20620;old_locus_tag=AD08_0260 NZ_JHDJ01000110.1 Protein Homology CDS 29625 30092 . + 0 ID=cds-WP_000725257.1;Parent=gene-AD08_RS20620;Dbxref=Genbank:WP_000725257.1;Name=WP_000725257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521900.1;locus_tag=AD08_RS20620;product=flagellar basal body-associated FliL family protein;protein_id=WP_000725257.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 30112 30828 . + . ID=gene-AD08_RS20615;Name=AD08_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20615;old_locus_tag=AD08_0261 NZ_JHDJ01000110.1 Protein Homology CDS 30112 30828 . + 0 ID=cds-WP_000938723.1;Parent=gene-AD08_RS20615;Dbxref=Genbank:WP_000938723.1;Name=WP_000938723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016151858.1;locus_tag=AD08_RS20615;product=FliA/WhiG family RNA polymerase sigma factor;protein_id=WP_000938723.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 30841 31704 . + . ID=gene-AD08_RS20610;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=AD08_RS20610;old_locus_tag=AD08_0262 NZ_JHDJ01000110.1 Protein Homology CDS 30841 31704 . + 0 ID=cds-WP_032218081.1;Parent=gene-AD08_RS20610;Dbxref=Genbank:WP_032218081.1;Name=WP_032218081.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001169515.1;locus_tag=AD08_RS20610;product=flagellar motor stator protein MotA;protein_id=WP_032218081.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 31707 32630 . + . ID=gene-AD08_RS20605;Name=lafU;gbkey=Gene;gene=lafU;gene_biotype=protein_coding;locus_tag=AD08_RS20605;old_locus_tag=AD08_0263 NZ_JHDJ01000110.1 Protein Homology CDS 31707 32630 . + 0 ID=cds-WP_071995811.1;Parent=gene-AD08_RS20605;Dbxref=Genbank:WP_071995811.1;Name=WP_071995811.1;gbkey=CDS;gene=lafU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521902.1;locus_tag=AD08_RS20605;product=putative lateral flagellar export/assembly protein LafU;protein_id=WP_071995811.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 32701 33756 . + . ID=gene-AD08_RS20600;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=AD08_RS20600;old_locus_tag=AD08_0264 NZ_JHDJ01000110.1 Protein Homology CDS 32701 33756 . + 0 ID=cds-WP_001226164.1;Parent=gene-AD08_RS20600;Dbxref=Genbank:WP_001226164.1;Name=WP_001226164.1;gbkey=CDS;gene=dinB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414766.1;locus_tag=AD08_RS20600;product=DNA polymerase IV;protein_id=WP_001226164.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 33808 34101 . + . ID=gene-AD08_RS20595;Name=yafN;gbkey=Gene;gene=yafN;gene_biotype=protein_coding;locus_tag=AD08_RS20595;old_locus_tag=AD08_0265 NZ_JHDJ01000110.1 Protein Homology CDS 33808 34101 . + 0 ID=cds-WP_000554758.1;Parent=gene-AD08_RS20595;Dbxref=Genbank:WP_000554758.1;Name=WP_000554758.1;gbkey=CDS;gene=yafN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414767.1;locus_tag=AD08_RS20595;product=type I toxin-antitoxin system antitoxin YafN;protein_id=WP_000554758.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 34104 34502 . + . ID=gene-AD08_RS20590;Name=yafO;gbkey=Gene;gene=yafO;gene_biotype=protein_coding;locus_tag=AD08_RS20590;old_locus_tag=AD08_0266 NZ_JHDJ01000110.1 Protein Homology CDS 34104 34502 . + 0 ID=cds-WP_001263489.1;Parent=gene-AD08_RS20590;Dbxref=Genbank:WP_001263489.1;Name=WP_001263489.1;gbkey=CDS;gene=yafO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414768.1;locus_tag=AD08_RS20590;product=type II toxin-antitoxin system mRNA interferase toxin YafO;protein_id=WP_001263489.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 34512 34964 . + . ID=gene-AD08_RS20585;Name=AD08_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20585;old_locus_tag=AD08_0267 NZ_JHDJ01000110.1 Protein Homology CDS 34512 34964 . + 0 ID=cds-WP_064734307.1;Parent=gene-AD08_RS20585;Dbxref=Genbank:WP_064734307.1;Name=WP_064734307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414769.1;locus_tag=AD08_RS20585;product=GNAT family N-acetyltransferase;protein_id=WP_064734307.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 35270 35536 . + . ID=gene-AD08_RS20580;Name=AD08_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20580;old_locus_tag=AD08_0268 NZ_JHDJ01000110.1 Protein Homology CDS 35270 35536 . + 0 ID=cds-WP_001295202.1;Parent=gene-AD08_RS20580;Dbxref=Genbank:WP_001295202.1;Name=WP_001295202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308289.1;locus_tag=AD08_RS20580;product=hypothetical protein;protein_id=WP_001295202.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 35469 36005 . + . ID=gene-AD08_RS20575;Name=AD08_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20575;old_locus_tag=AD08_0269 NZ_JHDJ01000110.1 Protein Homology CDS 35469 36005 . + 0 ID=cds-WP_001326471.1;Parent=gene-AD08_RS20575;Dbxref=Genbank:WP_001326471.1;Name=WP_001326471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001329160.1;locus_tag=AD08_RS20575;product=peptide chain release factor H;protein_id=WP_001326471.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 36062 37519 . - . ID=gene-AD08_RS20570;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=AD08_RS20570;old_locus_tag=AD08_0270 NZ_JHDJ01000110.1 Protein Homology CDS 36062 37519 . - 0 ID=cds-WP_001292994.1;Parent=gene-AD08_RS20570;Dbxref=Genbank:WP_001292994.1;Name=WP_001292994.1;gbkey=CDS;gene=pepD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008783788.1;locus_tag=AD08_RS20570;product=cytosol nonspecific dipeptidase;protein_id=WP_001292994.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 37780 38238 . + . ID=gene-AD08_RS20565;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=AD08_RS20565;old_locus_tag=AD08_0271 NZ_JHDJ01000110.1 Protein Homology CDS 37780 38238 . + 0 ID=cds-WP_001291990.1;Parent=gene-AD08_RS20565;Dbxref=Genbank:WP_001291990.1;Name=WP_001291990.1;gbkey=CDS;gene=gpt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308292.1;locus_tag=AD08_RS20565;product=xanthine phosphoribosyltransferase;protein_id=WP_001291990.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 38330 39574 . + . ID=gene-AD08_RS20560;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=AD08_RS20560;old_locus_tag=AD08_0272 NZ_JHDJ01000110.1 Protein Homology CDS 38330 39574 . + 0 ID=cds-WP_000189532.1;Parent=gene-AD08_RS20560;Dbxref=Genbank:WP_000189532.1;Name=WP_000189532.1;gbkey=CDS;gene=frsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414774.1;locus_tag=AD08_RS20560;product=esterase FrsA;protein_id=WP_000189532.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 39632 40033 . + . ID=gene-AD08_RS20555;Name=AD08_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20555;old_locus_tag=AD08_0273 NZ_JHDJ01000110.1 Protein Homology CDS 39632 40033 . + 0 ID=cds-WP_000174677.1;Parent=gene-AD08_RS20555;Dbxref=Genbank:WP_000174677.1;Name=WP_000174677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308294.1;locus_tag=AD08_RS20555;product=sigma factor-binding protein Crl;protein_id=WP_000174677.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 40072 41127 . - . ID=gene-AD08_RS20550;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=AD08_RS20550;old_locus_tag=AD08_0274 NZ_JHDJ01000110.1 Protein Homology CDS 40072 41127 . - 0 ID=cds-WP_000749863.1;Parent=gene-AD08_RS20550;Dbxref=Genbank:WP_000749863.1;Name=WP_000749863.1;gbkey=CDS;gene=phoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414776.1;locus_tag=AD08_RS20550;product=phosphoporin PhoE;protein_id=WP_000749863.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 41415 42518 . + . ID=gene-AD08_RS20545;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=AD08_RS20545;old_locus_tag=AD08_0275 NZ_JHDJ01000110.1 Protein Homology CDS 41415 42518 . + 0 ID=cds-WP_001285288.1;Parent=gene-AD08_RS20545;Dbxref=Genbank:WP_001285288.1;Name=WP_001285288.1;gbkey=CDS;gene=proB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308296.1;locus_tag=AD08_RS20545;product=glutamate 5-kinase;protein_id=WP_001285288.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 42530 43783 . + . ID=gene-AD08_RS20540;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=AD08_RS20540;old_locus_tag=AD08_0276 NZ_JHDJ01000110.1 Protein Homology CDS 42530 43783 . + 0 ID=cds-WP_000893278.1;Parent=gene-AD08_RS20540;Dbxref=Genbank:WP_000893278.1;Name=WP_000893278.1;gbkey=CDS;gene=proA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414778.1;locus_tag=AD08_RS20540;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_000893278.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 43898 43973 . + . ID=gene-AD08_RS20535;Name=AD08_RS20535;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS20535;old_locus_tag=AD08_0277 NZ_JHDJ01000110.1 tRNAscan-SE tRNA 43898 43973 . + . ID=rna-AD08_RS20535;Parent=gene-AD08_RS20535;anticodon=(pos:43931..43933);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS20535;product=tRNA-Thr NZ_JHDJ01000110.1 tRNAscan-SE exon 43898 43973 . + . ID=exon-AD08_RS20535-1;Parent=rna-AD08_RS20535;anticodon=(pos:43931..43933);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS20535;product=tRNA-Thr NZ_JHDJ01000110.1 RefSeq gene 44100 44510 . - . ID=gene-AD08_RS20530;Name=AD08_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20530;old_locus_tag=AD08_0278 NZ_JHDJ01000110.1 Protein Homology CDS 44100 44510 . - 0 ID=cds-WP_001111348.1;Parent=gene-AD08_RS20530;Dbxref=Genbank:WP_001111348.1;Name=WP_001111348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518746.1;locus_tag=AD08_RS20530;product=hypothetical protein;protein_id=WP_001111348.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 44489 45445 . - . ID=gene-AD08_RS20525;Name=paoD;gbkey=Gene;gene=paoD;gene_biotype=protein_coding;locus_tag=AD08_RS20525;old_locus_tag=AD08_0279 NZ_JHDJ01000110.1 Protein Homology CDS 44489 45445 . - 0 ID=cds-WP_032218084.1;Parent=gene-AD08_RS20525;Dbxref=Genbank:WP_032218084.1;Name=WP_032218084.1;gbkey=CDS;gene=paoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414817.1;locus_tag=AD08_RS20525;product=molybdenum cofactor insertion chaperone PaoD;protein_id=WP_032218084.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 45455 47653 . - . ID=gene-AD08_RS20520;Name=AD08_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20520;old_locus_tag=AD08_0280 NZ_JHDJ01000110.1 Protein Homology CDS 45455 47653 . - 0 ID=cds-WP_032218089.1;Parent=gene-AD08_RS20520;Dbxref=Genbank:WP_032218089.1;Name=WP_032218089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414818.1;locus_tag=AD08_RS20520;product=aldehyde oxidoreductase molybdenum-binding subunit PaoC;protein_id=WP_032218089.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 47650 48606 . - . ID=gene-AD08_RS20515;Name=AD08_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20515;old_locus_tag=AD08_0281 NZ_JHDJ01000110.1 Protein Homology CDS 47650 48606 . - 0 ID=cds-WP_000643333.1;Parent=gene-AD08_RS20515;Dbxref=Genbank:WP_000643333.1;Name=WP_000643333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414819.1;locus_tag=AD08_RS20515;product=aldehyde oxidoreductase FAD-binding subunit PaoB;protein_id=WP_000643333.1;transl_table=11 NZ_JHDJ01000110.1 RefSeq gene 48716 48869 . + . ID=gene-AD08_RS20510;Name=AD08_RS20510;end_range=48869,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20510;old_locus_tag=AD08_0282;partial=true NZ_JHDJ01000110.1 Protein Homology CDS 48716 48869 . + 0 ID=cds-WP_032218092.1;Parent=gene-AD08_RS20510;Dbxref=Genbank:WP_032218092.1;Name=WP_032218092.1;end_range=48869,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD08_RS20510;partial=true;product=transposase;protein_id=WP_032218092.1;transl_table=11 ##sequence-region NZ_JHDJ01000111.1 1 10842 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000111.1 RefSeq region 1 10842 . + . ID=NZ_JHDJ01000111.1:1..10842;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000111.1 RefSeq gene 1 249 . + . ID=gene-AD08_RS20505;Name=AD08_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20505;old_locus_tag=AD08_0283;partial=true;start_range=.,1 NZ_JHDJ01000111.1 Protein Homology CDS 1 249 . + 0 ID=cds-WP_032218097.1;Parent=gene-AD08_RS20505;Dbxref=Genbank:WP_032218097.1;Name=WP_032218097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196185.1;locus_tag=AD08_RS20505;partial=true;product=DUF977 family protein;protein_id=WP_032218097.1;start_range=.,1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 282 956 . - . ID=gene-AD08_RS20500;Name=AD08_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20500;old_locus_tag=AD08_0284 NZ_JHDJ01000111.1 Protein Homology CDS 282 956 . - 0 ID=cds-WP_032218099.1;Parent=gene-AD08_RS20500;Dbxref=Genbank:WP_032218099.1;Name=WP_032218099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060692.1;locus_tag=AD08_RS20500;product=DUF4145 domain-containing protein;protein_id=WP_032218099.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 955 1200 . + . ID=gene-AD08_RS20495;Name=AD08_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20495;old_locus_tag=AD08_0285 NZ_JHDJ01000111.1 Protein Homology CDS 955 1200 . + 0 ID=cds-WP_001624507.1;Parent=gene-AD08_RS20495;Dbxref=Genbank:WP_001624507.1;Name=WP_001624507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001624507.1;locus_tag=AD08_RS20495;product=hypothetical protein;protein_id=WP_001624507.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 1255 1563 . - . ID=gene-AD08_RS20490;Name=AD08_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20490;old_locus_tag=AD08_0286 NZ_JHDJ01000111.1 Protein Homology CDS 1255 1563 . - 0 ID=cds-WP_032218101.1;Parent=gene-AD08_RS20490;Dbxref=Genbank:WP_032218101.1;Name=WP_032218101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005286394.1;locus_tag=AD08_RS20490;product=helix-turn-helix transcriptional regulator;protein_id=WP_032218101.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 1553 1882 . - . ID=gene-AD08_RS0124935;Name=AD08_RS0124935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124935 NZ_JHDJ01000111.1 Protein Homology CDS 1553 1882 . - 0 ID=cds-WP_032218116.1;Parent=gene-AD08_RS0124935;Dbxref=Genbank:WP_032218116.1;Name=WP_032218116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015871332.1;locus_tag=AD08_RS0124935;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_032218116.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 2203 2904 . + . ID=gene-AD08_RS0124940;Name=AD08_RS0124940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124940 NZ_JHDJ01000111.1 Protein Homology CDS 2203 2904 . + 0 ID=cds-WP_032218103.1;Parent=gene-AD08_RS0124940;Dbxref=Genbank:WP_032218103.1;Name=WP_032218103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001624513.1;locus_tag=AD08_RS0124940;product=antirepressor;protein_id=WP_032218103.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 2959 3369 . + . ID=gene-AD08_RS20485;Name=AD08_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20485;old_locus_tag=AD08_0289 NZ_JHDJ01000111.1 Protein Homology CDS 2959 3369 . + 0 ID=cds-WP_001076830.1;Parent=gene-AD08_RS20485;Dbxref=Genbank:WP_001076830.1;Name=WP_001076830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966857.1;locus_tag=AD08_RS20485;product=recombination protein NinB;protein_id=WP_001076830.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 3366 3557 . + . ID=gene-AD08_RS0124945;Name=AD08_RS0124945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124945 NZ_JHDJ01000111.1 Protein Homology CDS 3366 3557 . + 0 ID=cds-WP_001254269.1;Parent=gene-AD08_RS0124945;Dbxref=Genbank:WP_001254269.1;Name=WP_001254269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254268.1;locus_tag=AD08_RS0124945;product=NinE family protein;protein_id=WP_001254269.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 3581 3871 . + . ID=gene-AD08_RS0124950;Name=AD08_RS0124950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124950 NZ_JHDJ01000111.1 Protein Homology CDS 3581 3871 . + 0 ID=cds-WP_024194163.1;Parent=gene-AD08_RS0124950;Dbxref=Genbank:WP_024194163.1;Name=WP_024194163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000002235.1;locus_tag=AD08_RS0124950;product=DUF1364 domain-containing protein;protein_id=WP_024194163.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 3868 4230 . + . ID=gene-AD08_RS20480;Name=AD08_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20480;old_locus_tag=AD08_0291 NZ_JHDJ01000111.1 Protein Homology CDS 3868 4230 . + 0 ID=cds-WP_021565206.1;Parent=gene-AD08_RS20480;Dbxref=Genbank:WP_021565206.1;Name=WP_021565206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001008184.1;locus_tag=AD08_RS20480;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_021565206.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 4227 4427 . + . ID=gene-AD08_RS0124955;Name=AD08_RS0124955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124955 NZ_JHDJ01000111.1 Protein Homology CDS 4227 4427 . + 0 ID=cds-WP_016238028.1;Parent=gene-AD08_RS0124955;Dbxref=Genbank:WP_016238028.1;Name=WP_016238028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994506.1;locus_tag=AD08_RS0124955;product=protein ninH;protein_id=WP_016238028.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 4420 4800 . + . ID=gene-AD08_RS20475;Name=AD08_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20475;old_locus_tag=AD08_0292 NZ_JHDJ01000111.1 Protein Homology CDS 4420 4800 . + 0 ID=cds-WP_032218107.1;Parent=gene-AD08_RS20475;Dbxref=Genbank:WP_032218107.1;Name=WP_032218107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001204860.1;locus_tag=AD08_RS20475;product=antitermination protein;protein_id=WP_032218107.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 4935 5528 . + . ID=gene-AD08_RS20470;Name=AD08_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20470;old_locus_tag=AD08_0293 NZ_JHDJ01000111.1 Protein Homology CDS 4935 5528 . + 0 ID=cds-WP_032218109.1;Parent=gene-AD08_RS20470;Dbxref=Genbank:WP_032218109.1;Name=WP_032218109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000350576.1;locus_tag=AD08_RS20470;product=hypothetical protein;protein_id=WP_032218109.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 6855 8828 . + . ID=gene-AD08_RS20465;Name=AD08_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20465;old_locus_tag=AD08_0294 NZ_JHDJ01000111.1 Protein Homology CDS 6855 8828 . + 0 ID=cds-WP_000874521.1;Parent=gene-AD08_RS20465;Dbxref=Genbank:WP_000874521.1;Name=WP_000874521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016237845.1;locus_tag=AD08_RS20465;product=SASA family carbohydrate esterase;protein_id=WP_000874521.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 8969 9163 . + . ID=gene-AD08_RS20460;Name=AD08_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20460;old_locus_tag=AD08_0295 NZ_JHDJ01000111.1 Protein Homology CDS 8969 9163 . + 0 ID=cds-WP_024192660.1;Parent=gene-AD08_RS20460;Dbxref=Genbank:WP_024192660.1;Name=WP_024192660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000142785.1;locus_tag=AD08_RS20460;product=DUF1378 family protein;protein_id=WP_024192660.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 9189 9479 . + . ID=gene-AD08_RS20455;Name=AD08_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20455;old_locus_tag=AD08_0296 NZ_JHDJ01000111.1 Protein Homology CDS 9189 9479 . + 0 ID=cds-WP_000129681.1;Parent=gene-AD08_RS20455;Dbxref=Genbank:WP_000129681.1;Name=WP_000129681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232079.1;locus_tag=AD08_RS20455;product=DUF826 domain-containing protein;protein_id=WP_000129681.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 9556 9771 . + . ID=gene-AD08_RS0124965;Name=AD08_RS0124965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124965 NZ_JHDJ01000111.1 Protein Homology CDS 9556 9771 . + 0 ID=cds-WP_024194161.1;Parent=gene-AD08_RS0124965;Dbxref=Genbank:WP_024194161.1;Name=WP_024194161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707874.1;locus_tag=AD08_RS0124965;product=holin;protein_id=WP_024194161.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 9776 10309 . + . ID=gene-AD08_RS20450;Name=AD08_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20450;old_locus_tag=AD08_0297 NZ_JHDJ01000111.1 Protein Homology CDS 9776 10309 . + 0 ID=cds-WP_001539101.1;Parent=gene-AD08_RS20450;Dbxref=Genbank:WP_001539101.1;Name=WP_001539101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309240.1;locus_tag=AD08_RS20450;product=lysozyme;protein_id=WP_001539101.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 10466 10648 . + . ID=gene-AD08_RS30240;Name=AD08_RS30240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30240;old_locus_tag=AD08_0298 NZ_JHDJ01000111.1 Protein Homology CDS 10466 10648 . + 0 ID=cds-WP_021566721.1-2;Parent=gene-AD08_RS30240;Dbxref=Genbank:WP_021566721.1;Name=WP_021566721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310767.3;locus_tag=AD08_RS30240;product=hypothetical protein;protein_id=WP_021566721.1;transl_table=11 NZ_JHDJ01000111.1 RefSeq gene 10663 10794 . + . ID=gene-AD08_RS31575;Name=AD08_RS31575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31575;old_locus_tag=AD08_0299 NZ_JHDJ01000111.1 Protein Homology CDS 10663 10794 . + 0 ID=cds-WP_001280930.1-3;Parent=gene-AD08_RS31575;Dbxref=Genbank:WP_001280930.1;Name=WP_001280930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502641.1;locus_tag=AD08_RS31575;product=hypothetical protein;protein_id=WP_001280930.1;transl_table=11 ##sequence-region NZ_JHDJ01000112.1 1 82777 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000112.1 RefSeq region 1 82777 . + . ID=NZ_JHDJ01000112.1:1..82777;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000112.1 RefSeq gene 12 878 . + . ID=gene-AD08_RS20435;Name=AD08_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20435;old_locus_tag=AD08_0300 NZ_JHDJ01000112.1 Protein Homology CDS 12 878 . + 0 ID=cds-WP_032218138.1;Parent=gene-AD08_RS20435;Dbxref=Genbank:WP_032218138.1;Name=WP_032218138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707076.1;locus_tag=AD08_RS20435;product=IS3 family transposase;protein_id=WP_032218138.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 906 1553 . - . ID=gene-AD08_RS20430;Name=paoA;gbkey=Gene;gene=paoA;gene_biotype=protein_coding;locus_tag=AD08_RS20430;old_locus_tag=AD08_0301 NZ_JHDJ01000112.1 Protein Homology CDS 906 1553 . - 0 ID=cds-WP_032218123.1;Parent=gene-AD08_RS20430;Dbxref=Genbank:WP_032218123.1;Name=WP_032218123.1;gbkey=CDS;gene=paoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414820.1;locus_tag=AD08_RS20430;product=aldehyde dehydrogenase iron-sulfur subunit;protein_id=WP_032218123.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 1971 2585 . + . ID=gene-AD08_RS20425;Name=AD08_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20425;old_locus_tag=AD08_0303 NZ_JHDJ01000112.1 Protein Homology CDS 1971 2585 . + 0 ID=cds-WP_001019920.1;Parent=gene-AD08_RS20425;Dbxref=Genbank:WP_001019920.1;Name=WP_001019920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308344.1;locus_tag=AD08_RS20425;product=YagU family protein;protein_id=WP_001019920.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 2833 3162 . - . ID=gene-AD08_RS0124975;Name=AD08_RS0124975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124975 NZ_JHDJ01000112.1 Protein Homology CDS 2833 3162 . - 0 ID=cds-WP_001303809.1;Parent=gene-AD08_RS0124975;Dbxref=Genbank:WP_001303809.1;Name=WP_001303809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414822.1;locus_tag=AD08_RS0124975;product=YkgJ family cysteine cluster protein;protein_id=WP_001303809.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 3475 4185 . - . ID=gene-AD08_RS20420;Name=AD08_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20420;old_locus_tag=AD08_0305 NZ_JHDJ01000112.1 Protein Homology CDS 3475 4185 . - 0 ID=cds-WP_001350485.1;Parent=gene-AD08_RS20420;Dbxref=Genbank:WP_001350485.1;Name=WP_001350485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414823.2;locus_tag=AD08_RS20420;product=fimbrial chaperone EcpE;protein_id=WP_001350485.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 4154 5797 . - . ID=gene-AD08_RS20415;Name=ecpD;gbkey=Gene;gene=ecpD;gene_biotype=protein_coding;locus_tag=AD08_RS20415;old_locus_tag=AD08_0306 NZ_JHDJ01000112.1 Protein Homology CDS 4154 5797 . - 0 ID=cds-WP_001310578.1;Parent=gene-AD08_RS20415;Dbxref=Genbank:WP_001310578.1;Name=WP_001310578.1;gbkey=CDS;gene=ecpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414824.1;locus_tag=AD08_RS20415;product=fimbrial adhesin EcpD;protein_id=WP_001310578.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 5787 8312 . - . ID=gene-AD08_RS20410;Name=AD08_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20410;old_locus_tag=AD08_0307 NZ_JHDJ01000112.1 Protein Homology CDS 5787 8312 . - 0 ID=cds-WP_001463172.1;Parent=gene-AD08_RS20410;Dbxref=Genbank:WP_001463172.1;Name=WP_001463172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414825.1;locus_tag=AD08_RS20410;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_001463172.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 8338 9006 . - . ID=gene-AD08_RS20405;Name=AD08_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20405;old_locus_tag=AD08_0308 NZ_JHDJ01000112.1 Protein Homology CDS 8338 9006 . - 0 ID=cds-WP_000716398.1;Parent=gene-AD08_RS20405;Dbxref=Genbank:WP_000716398.1;Name=WP_000716398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414826.1;locus_tag=AD08_RS20405;product=fimbrial chaperone EcpB;protein_id=WP_000716398.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 9064 9651 . - . ID=gene-AD08_RS20400;Name=ecpA;gbkey=Gene;gene=ecpA;gene_biotype=protein_coding;gene_synonym=matB;locus_tag=AD08_RS20400;old_locus_tag=AD08_0309 NZ_JHDJ01000112.1 Protein Homology CDS 9064 9651 . - 0 ID=cds-WP_032218125.1;Parent=gene-AD08_RS20400;Dbxref=Genbank:WP_032218125.1;Name=WP_032218125.1;gbkey=CDS;gene=ecpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308350.1;locus_tag=AD08_RS20400;product=common pilus major fimbrillin subunit EcpA;protein_id=WP_032218125.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 9726 10268 . - . ID=gene-AD08_RS20395;Name=ecpR;gbkey=Gene;gene=ecpR;gene_biotype=protein_coding;gene_synonym=matA;locus_tag=AD08_RS20395;old_locus_tag=AD08_0310 NZ_JHDJ01000112.1 Protein Homology CDS 9726 10268 . - 0 ID=cds-WP_001301257.1;Parent=gene-AD08_RS20395;Dbxref=Genbank:WP_001301257.1;Name=WP_001301257.1;gbkey=CDS;gene=ecpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308351.2;locus_tag=AD08_RS20395;product=ECP biosynthesis operon DNA-binding transcriptional regulator EcpR;protein_id=WP_001301257.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 11092 11319 . + . ID=gene-AD08_RS0124980;Name=AD08_RS0124980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124980 NZ_JHDJ01000112.1 Protein Homology CDS 11092 11319 . + 0 ID=cds-WP_024167968.1;Parent=gene-AD08_RS0124980;Dbxref=Genbank:WP_024167968.1;Name=WP_024167968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414829.1;locus_tag=AD08_RS0124980;product=hypothetical protein;protein_id=WP_024167968.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 11354 11494 . - . ID=gene-AD08_RS20390;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AD08_RS20390;old_locus_tag=AD08_0311 NZ_JHDJ01000112.1 Protein Homology CDS 11354 11494 . - 0 ID=cds-WP_000866436.1;Parent=gene-AD08_RS20390;Dbxref=Genbank:WP_000866436.1;Name=WP_000866436.1;gbkey=CDS;gene=rpmJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588437.1;locus_tag=AD08_RS20390;product=50S ribosomal protein L36;protein_id=WP_000866436.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 11494 11757 . - . ID=gene-AD08_RS20385;Name=AD08_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20385;old_locus_tag=AD08_0312 NZ_JHDJ01000112.1 Protein Homology CDS 11494 11757 . - 0 ID=cds-WP_000803998.1;Parent=gene-AD08_RS20385;Dbxref=Genbank:WP_000803998.1;Name=WP_000803998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414830.1;locus_tag=AD08_RS20385;product=type B 50S ribosomal protein L31;protein_id=WP_000803998.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 12121 12222 . - . ID=gene-AD08_RS0124985;Name=AD08_RS0124985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124985 NZ_JHDJ01000112.1 Protein Homology CDS 12121 12222 . - 0 ID=cds-WP_000662258.1;Parent=gene-AD08_RS0124985;Dbxref=Genbank:WP_000662258.1;Name=WP_000662258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791238.1;locus_tag=AD08_RS0124985;product=hypothetical protein;protein_id=WP_000662258.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq pseudogene 12696 12785 . - . ID=gene-AD08_RS30250;Name=AD08_RS30250;end_range=12785,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30250;partial=true;pseudo=true NZ_JHDJ01000112.1 Protein Homology CDS 12696 12785 . - 0 ID=cds-AD08_RS30250;Parent=gene-AD08_RS30250;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=12785,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308358.1;locus_tag=AD08_RS30250;partial=true;product=oxidoreductase;pseudo=true;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 13337 17593 . + . ID=gene-AD08_RS20380;Name=fdeC;gbkey=Gene;gene=fdeC;gene_biotype=protein_coding;locus_tag=AD08_RS20380;old_locus_tag=AD08_0313 NZ_JHDJ01000112.1 Protein Homology CDS 13337 17593 . + 0 ID=cds-WP_032218128.1;Parent=gene-AD08_RS20380;Dbxref=Genbank:WP_032218128.1;Name=WP_032218128.1;gbkey=CDS;gene=fdeC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001635811.1;locus_tag=AD08_RS20380;product=intimin-like adhesin FdeC;protein_id=WP_032218128.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 17733 18584 . - . ID=gene-AD08_RS0124990;Name=AD08_RS0124990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0124990 NZ_JHDJ01000112.1 Protein Homology CDS 17733 18584 . - 0 ID=cds-WP_000621009.1;Parent=gene-AD08_RS0124990;Dbxref=Genbank:WP_000621009.1;Name=WP_000621009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308364.2;locus_tag=AD08_RS0124990;product=helix-turn-helix domain-containing protein;protein_id=WP_000621009.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq pseudogene 18887 19015 . + . ID=gene-AD08_RS31580;Name=AD08_RS31580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31580;partial=true;pseudo=true;start_range=.,18887 NZ_JHDJ01000112.1 Protein Homology CDS 18887 19015 . + 0 ID=cds-AD08_RS31580;Parent=gene-AD08_RS31580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308365.3;locus_tag=AD08_RS31580;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,18887;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 19174 19767 . - . ID=gene-AD08_RS20375;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=AD08_RS20375;old_locus_tag=AD08_0316 NZ_JHDJ01000112.1 Protein Homology CDS 19174 19767 . - 0 ID=cds-WP_001299021.1;Parent=gene-AD08_RS20375;Dbxref=Genbank:WP_001299021.1;Name=WP_001299021.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414835.2;locus_tag=AD08_RS20375;product=reactive chlorine species resistance protein RclC;protein_id=WP_001299021.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 19779 20015 . - . ID=gene-AD08_RS20370;Name=AD08_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20370;old_locus_tag=AD08_0317 NZ_JHDJ01000112.1 Protein Homology CDS 19779 20015 . - 0 ID=cds-WP_000474084.1;Parent=gene-AD08_RS20370;Dbxref=Genbank:WP_000474084.1;Name=WP_000474084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414837.2;locus_tag=AD08_RS20370;product=DUF1471 domain-containing protein;protein_id=WP_000474084.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 20124 21449 . - . ID=gene-AD08_RS20365;Name=AD08_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20365;old_locus_tag=AD08_0318 NZ_JHDJ01000112.1 Protein Homology CDS 20124 21449 . - 0 ID=cds-WP_001046307.1;Parent=gene-AD08_RS20365;Dbxref=Genbank:WP_001046307.1;Name=WP_001046307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414838.2;locus_tag=AD08_RS20365;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=WP_001046307.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 21675 22529 . + . ID=gene-AD08_RS20360;Name=AD08_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20360;old_locus_tag=AD08_0319 NZ_JHDJ01000112.1 Protein Homology CDS 21675 22529 . + 0 ID=cds-WP_000339594.1;Parent=gene-AD08_RS20360;Dbxref=Genbank:WP_000339594.1;Name=WP_000339594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414839.1;locus_tag=AD08_RS20360;product=DNA-binding transcriptional regulator RclR;protein_id=WP_000339594.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 23057 23776 . + . ID=gene-AD08_RS20355;Name=AD08_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20355;old_locus_tag=AD08_0321 NZ_JHDJ01000112.1 Protein Homology CDS 23057 23776 . + 0 ID=cds-WP_001102108.1;Parent=gene-AD08_RS20355;Dbxref=Genbank:WP_001102108.1;Name=WP_001102108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414840.1;locus_tag=AD08_RS20355;product=(Fe-S)-binding protein;protein_id=WP_001102108.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 23787 25214 . + . ID=gene-AD08_RS20350;Name=AD08_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20350;old_locus_tag=AD08_0322 NZ_JHDJ01000112.1 Protein Homology CDS 23787 25214 . + 0 ID=cds-WP_000023927.1;Parent=gene-AD08_RS20350;Dbxref=Genbank:WP_000023927.1;Name=WP_000023927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414841.1;locus_tag=AD08_RS20350;product=iron-sulfur cluster-binding protein;protein_id=WP_000023927.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 25207 25902 . + . ID=gene-AD08_RS20345;Name=AD08_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20345;old_locus_tag=AD08_0323 NZ_JHDJ01000112.1 Protein Homology CDS 25207 25902 . + 0 ID=cds-WP_000370307.1;Parent=gene-AD08_RS20345;Dbxref=Genbank:WP_000370307.1;Name=WP_000370307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414842.4;locus_tag=AD08_RS20345;product=lactate utilization protein C;protein_id=WP_000370307.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 26145 26813 . - . ID=gene-AD08_RS20340;Name=AD08_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20340;old_locus_tag=AD08_0324 NZ_JHDJ01000112.1 Protein Homology CDS 26145 26813 . - 0 ID=cds-WP_001209100.1;Parent=gene-AD08_RS20340;Dbxref=Genbank:WP_001209100.1;Name=WP_001209100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414844.1;locus_tag=AD08_RS20340;product=hypothetical protein;protein_id=WP_001209100.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 27026 28696 . - . ID=gene-AD08_RS20335;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=AD08_RS20335;old_locus_tag=AD08_0325 NZ_JHDJ01000112.1 Protein Homology CDS 27026 28696 . - 0 ID=cds-WP_001159094.1;Parent=gene-AD08_RS20335;Dbxref=Genbank:WP_001159094.1;Name=WP_001159094.1;gbkey=CDS;gene=betA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414845.1;locus_tag=AD08_RS20335;product=choline dehydrogenase;protein_id=WP_001159094.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 28710 30182 . - . ID=gene-AD08_RS20330;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=AD08_RS20330;old_locus_tag=AD08_0326 NZ_JHDJ01000112.1 Protein Homology CDS 28710 30182 . - 0 ID=cds-WP_032218132.1;Parent=gene-AD08_RS20330;Dbxref=Genbank:WP_032218132.1;Name=WP_032218132.1;gbkey=CDS;gene=betB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414846.1;locus_tag=AD08_RS20330;product=betaine-aldehyde dehydrogenase;protein_id=WP_032218132.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 30196 30783 . - . ID=gene-AD08_RS20325;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=AD08_RS20325;old_locus_tag=AD08_0327 NZ_JHDJ01000112.1 Protein Homology CDS 30196 30783 . - 0 ID=cds-WP_001335745.1;Parent=gene-AD08_RS20325;Dbxref=Genbank:WP_001335745.1;Name=WP_001335745.1;gbkey=CDS;gene=betI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414847.3;locus_tag=AD08_RS20325;product=transcriptional regulator BetI;protein_id=WP_001335745.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 30912 32945 . + . ID=gene-AD08_RS20320;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=AD08_RS20320;old_locus_tag=AD08_0328 NZ_JHDJ01000112.1 Protein Homology CDS 30912 32945 . + 0 ID=cds-WP_000131044.1;Parent=gene-AD08_RS20320;Dbxref=Genbank:WP_000131044.1;Name=WP_000131044.1;gbkey=CDS;gene=betT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308387.1;locus_tag=AD08_RS20320;product=choline BCCT transporter BetT;protein_id=WP_000131044.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 33251 33325 . + . ID=gene-AD08_RS31585;Name=AD08_RS31585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31585 NZ_JHDJ01000112.1 Protein Homology CDS 33251 33325 . + 0 ID=cds-WP_120795374.1;Parent=gene-AD08_RS31585;Dbxref=Genbank:WP_120795374.1;Name=WP_120795374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518747.1;locus_tag=AD08_RS31585;product=protein YahV;protein_id=WP_120795374.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 33820 34908 . + . ID=gene-AD08_RS20315;Name=AD08_RS20315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20315;old_locus_tag=AD08_0329 NZ_JHDJ01000112.1 Protein Homology CDS 33820 34908 . + 0 ID=cds-WP_001301264.1;Parent=gene-AD08_RS20315;Dbxref=Genbank:WP_001301264.1;Name=WP_001301264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414849.1;locus_tag=AD08_RS20315;product=DNA-binding transcriptional activator/c-di-GMP phosphodiesterase PdeL;protein_id=WP_001301264.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 34950 35882 . - . ID=gene-AD08_RS20310;Name=AD08_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20310;old_locus_tag=AD08_0330 NZ_JHDJ01000112.1 Protein Homology CDS 34950 35882 . - 0 ID=cds-WP_001084399.1;Parent=gene-AD08_RS20310;Dbxref=Genbank:WP_001084399.1;Name=WP_001084399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414850.1;locus_tag=AD08_RS20310;product=LysR family transcriptional regulator;protein_id=WP_001084399.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 35974 36471 . - . ID=gene-AD08_RS20305;Name=AD08_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20305;old_locus_tag=AD08_0331 NZ_JHDJ01000112.1 Protein Homology CDS 35974 36471 . - 0 ID=cds-WP_001013892.1;Parent=gene-AD08_RS20305;Dbxref=Genbank:WP_001013892.1;Name=WP_001013892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414851.1;locus_tag=AD08_RS20305;product=DUF1097 domain-containing protein;protein_id=WP_001013892.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 36729 37334 . + . ID=gene-AD08_RS20300;Name=AD08_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20300;old_locus_tag=AD08_0332 NZ_JHDJ01000112.1 Protein Homology CDS 36729 37334 . + 0 ID=cds-WP_000023635.1;Parent=gene-AD08_RS20300;Dbxref=Genbank:WP_000023635.1;Name=WP_000023635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414852.1;locus_tag=AD08_RS20300;product=ankyrin repeat domain-containing protein;protein_id=WP_000023635.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 37374 38237 . + . ID=gene-AD08_RS20295;Name=AD08_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20295;old_locus_tag=AD08_0333 NZ_JHDJ01000112.1 Protein Homology CDS 37374 38237 . + 0 ID=cds-WP_001310582.1;Parent=gene-AD08_RS20295;Dbxref=Genbank:WP_001310582.1;Name=WP_001310582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414853.1;locus_tag=AD08_RS20295;product=DUF2877 domain-containing protein;protein_id=WP_001310582.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 38227 39774 . + . ID=gene-AD08_RS20290;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=AD08_RS20290;old_locus_tag=AD08_0334 NZ_JHDJ01000112.1 Protein Homology CDS 38227 39774 . + 0 ID=cds-WP_000111836.1;Parent=gene-AD08_RS20290;Dbxref=Genbank:WP_000111836.1;Name=WP_000111836.1;gbkey=CDS;gene=fdrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414854.1;locus_tag=AD08_RS20290;product=acyl-CoA synthetase FdrA;protein_id=WP_000111836.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 39774 41192 . + . ID=gene-AD08_RS20285;Name=AD08_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20285;old_locus_tag=AD08_0335 NZ_JHDJ01000112.1 Protein Homology CDS 39774 41192 . + 0 ID=cds-WP_000083429.1;Parent=gene-AD08_RS20285;Dbxref=Genbank:WP_000083429.1;Name=WP_000083429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414855.1;locus_tag=AD08_RS20285;product=DUF1116 domain-containing protein;protein_id=WP_000083429.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 41242 41538 . + . ID=gene-AD08_RS20280;Name=AD08_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20280;old_locus_tag=AD08_0336 NZ_JHDJ01000112.1 GeneMarkS-2+ CDS 41242 41538 . + 0 ID=cds-WP_001295687.1;Parent=gene-AD08_RS20280;Dbxref=Genbank:WP_001295687.1;Name=WP_001295687.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS20280;product=hypothetical protein;protein_id=WP_001295687.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 41614 42564 . + . ID=gene-AD08_RS20275;Name=AD08_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20275;old_locus_tag=AD08_0337 NZ_JHDJ01000112.1 Protein Homology CDS 41614 42564 . + 0 ID=cds-WP_000661672.1;Parent=gene-AD08_RS20275;Dbxref=Genbank:WP_000661672.1;Name=WP_000661672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414857.1;locus_tag=AD08_RS20275;product=carbamate kinase family protein;protein_id=WP_000661672.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 42574 43956 . + . ID=gene-AD08_RS20270;Name=AD08_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20270;old_locus_tag=AD08_0338 NZ_JHDJ01000112.1 Protein Homology CDS 42574 43956 . + 0 ID=cds-WP_000665120.1;Parent=gene-AD08_RS20270;Dbxref=Genbank:WP_000665120.1;Name=WP_000665120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414858.1;locus_tag=AD08_RS20270;product=amidohydrolase family protein;protein_id=WP_000665120.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 44333 45382 . + . ID=gene-AD08_RS20265;Name=yahK;gbkey=Gene;gene=yahK;gene_biotype=protein_coding;locus_tag=AD08_RS20265;old_locus_tag=AD08_0339 NZ_JHDJ01000112.1 Protein Homology CDS 44333 45382 . + 0 ID=cds-WP_000692754.1;Parent=gene-AD08_RS20265;Dbxref=Genbank:WP_000692754.1;Name=WP_000692754.1;gbkey=CDS;gene=yahK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414859.1;locus_tag=AD08_RS20265;product=NADPH-dependent aldehyde reductase YahK;protein_id=WP_000692754.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 45625 46440 . + . ID=gene-AD08_RS20260;Name=AD08_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20260;old_locus_tag=AD08_0340 NZ_JHDJ01000112.1 Protein Homology CDS 45625 46440 . + 0 ID=cds-WP_001301260.1;Parent=gene-AD08_RS20260;Dbxref=Genbank:WP_001301260.1;Name=WP_001301260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414860.1;locus_tag=AD08_RS20260;product=hypothetical protein;protein_id=WP_001301260.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 46853 47098 . + . ID=gene-AD08_RS0125005;Name=AD08_RS0125005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125005 NZ_JHDJ01000112.1 Protein Homology CDS 46853 47098 . + 0 ID=cds-WP_000290616.1;Parent=gene-AD08_RS0125005;Dbxref=Genbank:WP_000290616.1;Name=WP_000290616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414861.2;locus_tag=AD08_RS0125005;product=hypothetical protein;protein_id=WP_000290616.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 47115 47786 . - . ID=gene-AD08_RS20255;Name=AD08_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20255;old_locus_tag=AD08_0343 NZ_JHDJ01000112.1 Protein Homology CDS 47115 47786 . - 0 ID=cds-WP_000983410.1;Parent=gene-AD08_RS20255;Dbxref=Genbank:WP_000983410.1;Name=WP_000983410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414862.1;locus_tag=AD08_RS20255;product=LysE family transporter;protein_id=WP_000983410.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 47933 48208 . + . ID=gene-AD08_RS20250;Name=AD08_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20250;old_locus_tag=AD08_0344 NZ_JHDJ01000112.1 Protein Homology CDS 47933 48208 . + 0 ID=cds-WP_000691956.1;Parent=gene-AD08_RS20250;Dbxref=Genbank:WP_000691956.1;Name=WP_000691956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414863.1;locus_tag=AD08_RS20250;product=DUF1471 domain-containing protein;protein_id=WP_000691956.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 48306 49892 . - . ID=gene-AD08_RS20245;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=AD08_RS20245;old_locus_tag=AD08_0346 NZ_JHDJ01000112.1 Protein Homology CDS 48306 49892 . - 0 ID=cds-WP_000941041.1;Parent=gene-AD08_RS20245;Dbxref=Genbank:WP_000941041.1;Name=WP_000941041.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414864.1;locus_tag=AD08_RS20245;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_000941041.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 50131 51021 . + . ID=gene-AD08_RS20240;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=AD08_RS20240;old_locus_tag=AD08_0347 NZ_JHDJ01000112.1 Protein Homology CDS 50131 51021 . + 0 ID=cds-WP_000052206.1;Parent=gene-AD08_RS20240;Dbxref=Genbank:WP_000052206.1;Name=WP_000052206.1;gbkey=CDS;gene=prpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414865.1;locus_tag=AD08_RS20240;product=methylisocitrate lyase;protein_id=WP_000052206.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 51647 52816 . + . ID=gene-AD08_RS20235;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=AD08_RS20235;old_locus_tag=AD08_0348 NZ_JHDJ01000112.1 Protein Homology CDS 51647 52816 . + 0 ID=cds-WP_001285927.1;Parent=gene-AD08_RS20235;Dbxref=Genbank:WP_001285927.1;Name=WP_001285927.1;gbkey=CDS;gene=prpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414867.1;locus_tag=AD08_RS20235;product=2-methylcitrate synthase;protein_id=WP_001285927.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 52850 54301 . + . ID=gene-AD08_RS20230;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=protein_coding;locus_tag=AD08_RS20230;old_locus_tag=AD08_0349 NZ_JHDJ01000112.1 Protein Homology CDS 52850 54301 . + 0 ID=cds-WP_001275859.1;Parent=gene-AD08_RS20230;Dbxref=Genbank:WP_001275859.1;Name=WP_001275859.1;gbkey=CDS;gene=prpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414868.1;locus_tag=AD08_RS20230;product=2-methylcitrate dehydratase;protein_id=WP_001275859.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 54341 56227 . + . ID=gene-AD08_RS20225;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=AD08_RS20225;old_locus_tag=AD08_0350 NZ_JHDJ01000112.1 Protein Homology CDS 54341 56227 . + 0 ID=cds-WP_001643042.1;Parent=gene-AD08_RS20225;Dbxref=Genbank:WP_001643042.1;Name=WP_001643042.1;gbkey=CDS;gene=prpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414869.1;locus_tag=AD08_RS20225;product=propionate--CoA ligase;protein_id=WP_001643042.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 56463 57722 . + . ID=gene-AD08_RS20220;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=AD08_RS20220;old_locus_tag=AD08_0351 NZ_JHDJ01000112.1 Protein Homology CDS 56463 57722 . + 0 ID=cds-WP_000076233.1;Parent=gene-AD08_RS20220;Dbxref=Genbank:WP_000076233.1;Name=WP_000076233.1;gbkey=CDS;gene=codB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414870.1;locus_tag=AD08_RS20220;product=cytosine permease;protein_id=WP_000076233.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 57712 58995 . + . ID=gene-AD08_RS20215;Name=AD08_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20215;old_locus_tag=AD08_0352 NZ_JHDJ01000112.1 Protein Homology CDS 57712 58995 . + 0 ID=cds-WP_001301240.1;Parent=gene-AD08_RS20215;Dbxref=Genbank:WP_001301240.1;Name=WP_001301240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414871.1;locus_tag=AD08_RS20215;product=cytosine/isoguanine deaminase;protein_id=WP_001301240.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 59532 60431 . - . ID=gene-AD08_RS20210;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=AD08_RS20210;old_locus_tag=AD08_0353 NZ_JHDJ01000112.1 Protein Homology CDS 59532 60431 . - 0 ID=cds-WP_000952503.1-2;Parent=gene-AD08_RS20210;Dbxref=Genbank:WP_000952503.1;Name=WP_000952503.1;gbkey=CDS;gene=cynR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414872.3;locus_tag=AD08_RS20210;product=transcriptional regulator CynR;protein_id=WP_000952503.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 60540 61199 . + . ID=gene-AD08_RS20205;Name=AD08_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20205;old_locus_tag=AD08_0354 NZ_JHDJ01000112.1 Protein Homology CDS 60540 61199 . + 0 ID=cds-WP_000658652.1;Parent=gene-AD08_RS20205;Dbxref=Genbank:WP_000658652.1;Name=WP_000658652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414873.1;locus_tag=AD08_RS20205;product=carbonic anhydrase CynT;protein_id=WP_000658652.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 61230 61700 . + . ID=gene-AD08_RS20200;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=AD08_RS20200;old_locus_tag=AD08_0355 NZ_JHDJ01000112.1 Protein Homology CDS 61230 61700 . + 0 ID=cds-WP_000616243.1;Parent=gene-AD08_RS20200;Dbxref=Genbank:WP_000616243.1;Name=WP_000616243.1;gbkey=CDS;gene=cynS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414874.1;locus_tag=AD08_RS20200;product=cyanase;protein_id=WP_000616243.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 61706 62887 . + . ID=gene-AD08_RS20195;Name=cynX;gbkey=Gene;gene=cynX;gene_biotype=protein_coding;locus_tag=AD08_RS20195;old_locus_tag=AD08_0356 NZ_JHDJ01000112.1 Protein Homology CDS 61706 62887 . + 0 ID=cds-WP_001301263.1;Parent=gene-AD08_RS20195;Dbxref=Genbank:WP_001301263.1;Name=WP_001301263.1;gbkey=CDS;gene=cynX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308421.2;locus_tag=AD08_RS20195;product=cyanate transporter CynX;protein_id=WP_001301263.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 62990 63601 . - . ID=gene-AD08_RS20190;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=AD08_RS20190;old_locus_tag=AD08_0357 NZ_JHDJ01000112.1 Protein Homology CDS 62990 63601 . - 0 ID=cds-WP_001335915.1;Parent=gene-AD08_RS20190;Dbxref=Genbank:WP_001335915.1;Name=WP_001335915.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414876.1;locus_tag=AD08_RS20190;product=galactoside O-acetyltransferase;protein_id=WP_001335915.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 63667 64920 . - . ID=gene-AD08_RS20185;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=AD08_RS20185;old_locus_tag=AD08_0358 NZ_JHDJ01000112.1 Protein Homology CDS 63667 64920 . - 0 ID=cds-WP_000291549.1;Parent=gene-AD08_RS20185;Dbxref=Genbank:WP_000291549.1;Name=WP_000291549.1;gbkey=CDS;gene=lacY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414877.1;locus_tag=AD08_RS20185;product=lactose permease;protein_id=WP_000291549.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 64972 68046 . - . ID=gene-AD08_RS20180;Name=AD08_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20180;old_locus_tag=AD08_0359 NZ_JHDJ01000112.1 Protein Homology CDS 64972 68046 . - 0 ID=cds-WP_000177906.1;Parent=gene-AD08_RS20180;Dbxref=Genbank:WP_000177906.1;Name=WP_000177906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414878.1;locus_tag=AD08_RS20180;product=beta-galactosidase;protein_id=WP_000177906.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 68169 69251 . - . ID=gene-AD08_RS20175;Name=AD08_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20175;old_locus_tag=AD08_0360 NZ_JHDJ01000112.1 Protein Homology CDS 68169 69251 . - 0 ID=cds-WP_000805902.1;Parent=gene-AD08_RS20175;Dbxref=Genbank:WP_000805902.1;Name=WP_000805902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414879.3;locus_tag=AD08_RS20175;product=DNA-binding transcriptional repressor LacI;protein_id=WP_000805902.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 69328 70275 . - . ID=gene-AD08_RS20170;Name=mhpR;gbkey=Gene;gene=mhpR;gene_biotype=protein_coding;locus_tag=AD08_RS20170;old_locus_tag=AD08_0361 NZ_JHDJ01000112.1 Protein Homology CDS 69328 70275 . - 0 ID=cds-WP_071995812.1;Parent=gene-AD08_RS20170;Dbxref=Genbank:WP_071995812.1;Name=WP_071995812.1;gbkey=CDS;gene=mhpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414880.2;locus_tag=AD08_RS20170;product=DNA-binding transcriptional activator MhpR;protein_id=WP_071995812.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 70352 72016 . + . ID=gene-AD08_RS20165;Name=AD08_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20165;old_locus_tag=AD08_0362 NZ_JHDJ01000112.1 Protein Homology CDS 70352 72016 . + 0 ID=cds-WP_001007407.1;Parent=gene-AD08_RS20165;Dbxref=Genbank:WP_001007407.1;Name=WP_001007407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414881.1;locus_tag=AD08_RS20165;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_001007407.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 72018 72962 . + . ID=gene-AD08_RS20160;Name=mhpB;gbkey=Gene;gene=mhpB;gene_biotype=protein_coding;locus_tag=AD08_RS20160;old_locus_tag=AD08_0363 NZ_JHDJ01000112.1 Protein Homology CDS 72018 72962 . + 0 ID=cds-WP_032218135.1;Parent=gene-AD08_RS20160;Dbxref=Genbank:WP_032218135.1;Name=WP_032218135.1;gbkey=CDS;gene=mhpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308430.1;locus_tag=AD08_RS20160;product=3-carboxyethylcatechol 2%2C3-dioxygenase;protein_id=WP_032218135.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 72980 73846 . + . ID=gene-AD08_RS20155;Name=AD08_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20155;old_locus_tag=AD08_0364 NZ_JHDJ01000112.1 Protein Homology CDS 72980 73846 . + 0 ID=cds-WP_000121907.1;Parent=gene-AD08_RS20155;Dbxref=Genbank:WP_000121907.1;Name=WP_000121907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414883.5;locus_tag=AD08_RS20155;product=2-hydroxy-6-oxonona-2%2C4-dienedioate hydrolase;protein_id=WP_000121907.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 73856 74665 . + . ID=gene-AD08_RS20150;Name=mhpD;gbkey=Gene;gene=mhpD;gene_biotype=protein_coding;locus_tag=AD08_RS20150;old_locus_tag=AD08_0365 NZ_JHDJ01000112.1 Protein Homology CDS 73856 74665 . + 0 ID=cds-WP_000160710.1;Parent=gene-AD08_RS20150;Dbxref=Genbank:WP_000160710.1;Name=WP_000160710.1;gbkey=CDS;gene=mhpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414884.2;locus_tag=AD08_RS20150;product=2-keto-4-pentenoate hydratase;protein_id=WP_000160710.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 74662 75612 . + . ID=gene-AD08_RS20145;Name=AD08_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20145;old_locus_tag=AD08_0366 NZ_JHDJ01000112.1 Protein Homology CDS 74662 75612 . + 0 ID=cds-WP_000044314.1;Parent=gene-AD08_RS20145;Dbxref=Genbank:WP_000044314.1;Name=WP_000044314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414885.1;locus_tag=AD08_RS20145;product=acetaldehyde dehydrogenase;protein_id=WP_000044314.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 75609 76622 . + . ID=gene-AD08_RS20140;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=AD08_RS20140;old_locus_tag=AD08_0367 NZ_JHDJ01000112.1 Protein Homology CDS 75609 76622 . + 0 ID=cds-WP_001013499.1;Parent=gene-AD08_RS20140;Dbxref=Genbank:WP_001013499.1;Name=WP_001013499.1;gbkey=CDS;gene=dmpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414886.1;locus_tag=AD08_RS20140;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_001013499.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 76998 78209 . + . ID=gene-AD08_RS20135;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=AD08_RS20135;old_locus_tag=AD08_0368 NZ_JHDJ01000112.1 Protein Homology CDS 76998 78209 . + 0 ID=cds-WP_032188389.1;Parent=gene-AD08_RS20135;Dbxref=Genbank:WP_032188389.1;Name=WP_032188389.1;gbkey=CDS;gene=mhpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414887.2;locus_tag=AD08_RS20135;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_032188389.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 78311 78850 . + . ID=gene-AD08_RS20130;Name=AD08_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20130;old_locus_tag=AD08_0369 NZ_JHDJ01000112.1 Protein Homology CDS 78311 78850 . + 0 ID=cds-WP_001096705.1;Parent=gene-AD08_RS20130;Dbxref=Genbank:WP_001096705.1;Name=WP_001096705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414888.4;locus_tag=AD08_RS20130;product=DUF2058 domain-containing protein;protein_id=WP_001096705.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 79074 79907 . - . ID=gene-AD08_RS20125;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=AD08_RS20125;old_locus_tag=AD08_0370 NZ_JHDJ01000112.1 Protein Homology CDS 79074 79907 . - 0 ID=cds-WP_000419083.1;Parent=gene-AD08_RS20125;Dbxref=Genbank:WP_000419083.1;Name=WP_000419083.1;gbkey=CDS;gene=fghA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414889.1;locus_tag=AD08_RS20125;product=S-formylglutathione hydrolase;protein_id=WP_000419083.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 80001 81110 . - . ID=gene-AD08_RS20120;Name=AD08_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20120;old_locus_tag=AD08_0371 NZ_JHDJ01000112.1 Protein Homology CDS 80001 81110 . - 0 ID=cds-WP_000842100.1;Parent=gene-AD08_RS20120;Dbxref=Genbank:WP_000842100.1;Name=WP_000842100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308438.1;locus_tag=AD08_RS20120;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_000842100.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 81145 81420 . - . ID=gene-AD08_RS20115;Name=frmR;gbkey=Gene;gene=frmR;gene_biotype=protein_coding;locus_tag=AD08_RS20115;old_locus_tag=AD08_0372 NZ_JHDJ01000112.1 Protein Homology CDS 81145 81420 . - 0 ID=cds-WP_001141271.1;Parent=gene-AD08_RS20115;Dbxref=Genbank:WP_001141271.1;Name=WP_001141271.1;gbkey=CDS;gene=frmR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414891.4;locus_tag=AD08_RS20115;product=formaldehyde-responsive transcriptional repressor FrmR;protein_id=WP_001141271.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq gene 81607 82380 . - . ID=gene-AD08_RS20110;Name=yaiO;gbkey=Gene;gene=yaiO;gene_biotype=protein_coding;locus_tag=AD08_RS20110;old_locus_tag=AD08_0373 NZ_JHDJ01000112.1 Protein Homology CDS 81607 82380 . - 0 ID=cds-WP_000596084.1;Parent=gene-AD08_RS20110;Dbxref=Genbank:WP_000596084.1;Name=WP_000596084.1;gbkey=CDS;gene=yaiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414892.1;locus_tag=AD08_RS20110;product=YaiO family outer membrane beta-barrel protein;protein_id=WP_000596084.1;transl_table=11 NZ_JHDJ01000112.1 RefSeq pseudogene 82495 82767 . + . ID=gene-AD08_RS20105;Name=AD08_RS20105;end_range=82767,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS20105;old_locus_tag=AD08_0374;partial=true;pseudo=true NZ_JHDJ01000112.1 Protein Homology CDS 82495 82767 . + 0 ID=cds-AD08_RS20105;Parent=gene-AD08_RS20105;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=82767,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS20105;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000113.1 1 113085 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000113.1 RefSeq region 1 113085 . + . ID=NZ_JHDJ01000113.1:1..113085;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000113.1 RefSeq pseudogene 1 584 . + . ID=gene-AD08_RS30265;Name=AD08_RS30265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30265;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000113.1 Protein Homology CDS 1 584 . + 2 ID=cds-AD08_RS30265;Parent=gene-AD08_RS30265;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS30265;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 642 1604 . + . ID=gene-AD08_RS20095;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=AD08_RS20095;old_locus_tag=AD08_0377 NZ_JHDJ01000113.1 Protein Homology CDS 642 1604 . + 0 ID=cds-WP_032218149.1;Parent=gene-AD08_RS20095;Dbxref=Genbank:WP_032218149.1;Name=WP_032218149.1;gbkey=CDS;gene=tauA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414899.2;locus_tag=AD08_RS20095;product=taurine ABC transporter substrate-binding protein;protein_id=WP_032218149.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 1617 2384 . + . ID=gene-AD08_RS20090;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=AD08_RS20090;old_locus_tag=AD08_0378 NZ_JHDJ01000113.1 Protein Homology CDS 1617 2384 . + 0 ID=cds-WP_000939375.1;Parent=gene-AD08_RS20090;Dbxref=Genbank:WP_000939375.1;Name=WP_000939375.1;gbkey=CDS;gene=tauB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414900.1;locus_tag=AD08_RS20090;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_000939375.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 2381 3208 . + . ID=gene-AD08_RS20085;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=AD08_RS20085;old_locus_tag=AD08_0379 NZ_JHDJ01000113.1 Protein Homology CDS 2381 3208 . + 0 ID=cds-WP_032218151.1;Parent=gene-AD08_RS20085;Dbxref=Genbank:WP_032218151.1;Name=WP_032218151.1;gbkey=CDS;gene=tauC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414901.1;locus_tag=AD08_RS20085;product=taurine ABC transporter permease TauC;protein_id=WP_032218151.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 3205 4056 . + . ID=gene-AD08_RS20080;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=AD08_RS20080;old_locus_tag=AD08_0380 NZ_JHDJ01000113.1 Protein Homology CDS 3205 4056 . + 0 ID=cds-WP_032184200.1;Parent=gene-AD08_RS20080;Dbxref=Genbank:WP_032184200.1;Name=WP_032184200.1;gbkey=CDS;gene=tauD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414902.1;locus_tag=AD08_RS20080;product=taurine dioxygenase;protein_id=WP_032184200.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 4163 5137 . - . ID=gene-AD08_RS20075;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=AD08_RS20075;old_locus_tag=AD08_0381 NZ_JHDJ01000113.1 Protein Homology CDS 4163 5137 . - 0 ID=cds-WP_001295337.1;Parent=gene-AD08_RS20075;Dbxref=Genbank:WP_001295337.1;Name=WP_001295337.1;gbkey=CDS;gene=hemB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308450.2;locus_tag=AD08_RS20075;product=porphobilinogen synthase;protein_id=WP_001295337.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 5661 8567 . + . ID=gene-AD08_RS20070;Name=AD08_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20070;old_locus_tag=AD08_0383 NZ_JHDJ01000113.1 Protein Homology CDS 5661 8567 . + 0 ID=cds-WP_000556441.1;Parent=gene-AD08_RS20070;Dbxref=Genbank:WP_000556441.1;Name=WP_000556441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=AD08_RS20070;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000556441.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 8655 9278 . + . ID=gene-AD08_RS20065;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=AD08_RS20065;old_locus_tag=AD08_0384 NZ_JHDJ01000113.1 Protein Homology CDS 8655 9278 . + 0 ID=cds-WP_001295335.1;Parent=gene-AD08_RS20065;Dbxref=Genbank:WP_001295335.1;Name=WP_001295335.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414909.2;locus_tag=AD08_RS20065;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_001295335.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 9279 10436 . - . ID=gene-AD08_RS20060;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=AD08_RS20060;old_locus_tag=AD08_0385 NZ_JHDJ01000113.1 Protein Homology CDS 9279 10436 . - 0 ID=cds-WP_032218154.1;Parent=gene-AD08_RS20060;Dbxref=Genbank:WP_032218154.1;Name=WP_032218154.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=AD08_RS20060;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_032218154.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 10788 12008 . + . ID=gene-AD08_RS20050;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=AD08_RS20050;old_locus_tag=AD08_0387 NZ_JHDJ01000113.1 Protein Homology CDS 10788 12008 . + 0 ID=cds-WP_001301663.1;Parent=gene-AD08_RS20050;Dbxref=Genbank:WP_001301663.1;Name=WP_001301663.1;gbkey=CDS;gene=sbmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308454.1;locus_tag=AD08_RS20050;product=peptide antibiotic transporter SbmA;protein_id=WP_001301663.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 12021 13115 . + . ID=gene-AD08_RS20045;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=AD08_RS20045;old_locus_tag=AD08_0388 NZ_JHDJ01000113.1 Protein Homology CDS 12021 13115 . + 0 ID=cds-WP_032218156.1;Parent=gene-AD08_RS20045;Dbxref=Genbank:WP_032218156.1;Name=WP_032218156.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414912.1;locus_tag=AD08_RS20045;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_032218156.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 13174 13482 . - . ID=gene-AD08_RS20040;Name=AD08_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20040;old_locus_tag=AD08_0389 NZ_JHDJ01000113.1 Protein Homology CDS 13174 13482 . - 0 ID=cds-WP_000763151.1;Parent=gene-AD08_RS20040;Dbxref=Genbank:WP_000763151.1;Name=WP_000763151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308456.1;locus_tag=AD08_RS20040;product=DUF2755 family protein;protein_id=WP_000763151.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 13742 13954 . + . ID=gene-AD08_RS31025;Name=AD08_RS31025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31025;old_locus_tag=AD08_0390 NZ_JHDJ01000113.1 Protein Homology CDS 13742 13954 . + 0 ID=cds-WP_001295334.1;Parent=gene-AD08_RS31025;Dbxref=Genbank:WP_001295334.1;Name=WP_001295334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414914.2;locus_tag=AD08_RS31025;product=DUF2754 domain-containing protein;protein_id=WP_001295334.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 13978 15072 . - . ID=gene-AD08_RS20030;Name=AD08_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20030;old_locus_tag=AD08_0391 NZ_JHDJ01000113.1 Protein Homology CDS 13978 15072 . - 0 ID=cds-WP_000413677.1;Parent=gene-AD08_RS20030;Dbxref=Genbank:WP_000413677.1;Name=WP_000413677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308458.1;locus_tag=AD08_RS20030;product=D-alanine--D-alanine ligase;protein_id=WP_000413677.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 15150 15353 . + . ID=gene-AD08_RS20025;Name=AD08_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS20025;old_locus_tag=AD08_0392 NZ_JHDJ01000113.1 Protein Homology CDS 15150 15353 . + 0 ID=cds-WP_001300163.1;Parent=gene-AD08_RS20025;Dbxref=Genbank:WP_001300163.1;Name=WP_001300163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439229.1;locus_tag=AD08_RS20025;product=hypothetical protein;protein_id=WP_001300163.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 15535 15795 . + . ID=gene-AD08_RS20020;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=AD08_RS20020;old_locus_tag=AD08_0394 NZ_JHDJ01000113.1 Protein Homology CDS 15535 15795 . + 0 ID=cds-WP_000792970.1;Parent=gene-AD08_RS20020;Dbxref=Genbank:WP_000792970.1;Name=WP_000792970.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308459.1;locus_tag=AD08_RS20020;product=anti-adapter protein IraP;protein_id=WP_000792970.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 15896 17311 . + . ID=gene-AD08_RS20015;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=AD08_RS20015;old_locus_tag=AD08_0395 NZ_JHDJ01000113.1 Protein Homology CDS 15896 17311 . + 0 ID=cds-WP_000814403.1;Parent=gene-AD08_RS20015;Dbxref=Genbank:WP_000814403.1;Name=WP_000814403.1;gbkey=CDS;gene=phoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414917.2;locus_tag=AD08_RS20015;product=alkaline phosphatase;protein_id=WP_000814403.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 17430 17750 . + . ID=gene-AD08_RS20010;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=AD08_RS20010;old_locus_tag=AD08_0396 NZ_JHDJ01000113.1 Protein Homology CDS 17430 17750 . + 0 ID=cds-WP_001295332.1;Parent=gene-AD08_RS20010;Dbxref=Genbank:WP_001295332.1;Name=WP_001295332.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414918.4;locus_tag=AD08_RS20010;product=phosphate starvation-inducible protein PsiF;protein_id=WP_001295332.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 17852 18967 . + . ID=gene-AD08_RS20005;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=AD08_RS20005;old_locus_tag=AD08_0397 NZ_JHDJ01000113.1 Protein Homology CDS 17852 18967 . + 0 ID=cds-WP_000484048.1;Parent=gene-AD08_RS20005;Dbxref=Genbank:WP_000484048.1;Name=WP_000484048.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414919.1;locus_tag=AD08_RS20005;product=diguanylate cyclase AdrA;protein_id=WP_000484048.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 18984 19793 . - . ID=gene-AD08_RS20000;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=AD08_RS20000;old_locus_tag=AD08_0398 NZ_JHDJ01000113.1 Protein Homology CDS 18984 19793 . - 0 ID=cds-WP_001295331.1;Parent=gene-AD08_RS20000;Dbxref=Genbank:WP_001295331.1;Name=WP_001295331.1;gbkey=CDS;gene=proC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414920.1;locus_tag=AD08_RS20000;product=pyrroline-5-carboxylate reductase;protein_id=WP_001295331.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 19913 20371 . + . ID=gene-AD08_RS19995;Name=AD08_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19995;old_locus_tag=AD08_0399 NZ_JHDJ01000113.1 Protein Homology CDS 19913 20371 . + 0 ID=cds-WP_000158159.1;Parent=gene-AD08_RS19995;Dbxref=Genbank:WP_000158159.1;Name=WP_000158159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414921.2;locus_tag=AD08_RS19995;product=YaiI/YqxD family protein;protein_id=WP_000158159.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 20554 21078 . + . ID=gene-AD08_RS19990;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=AD08_RS19990;old_locus_tag=AD08_0400 NZ_JHDJ01000113.1 Protein Homology CDS 20554 21078 . + 0 ID=cds-WP_000193393.1;Parent=gene-AD08_RS19990;Dbxref=Genbank:WP_000193393.1;Name=WP_000193393.1;gbkey=CDS;gene=aroL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308465.1;locus_tag=AD08_RS19990;product=shikimate kinase AroL;protein_id=WP_000193393.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 21128 21319 . + . ID=gene-AD08_RS19985;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=AD08_RS19985;old_locus_tag=AD08_0401 NZ_JHDJ01000113.1 Protein Homology CDS 21128 21319 . + 0 ID=cds-WP_001142439.1;Parent=gene-AD08_RS19985;Dbxref=Genbank:WP_001142439.1;Name=WP_001142439.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308466.1;locus_tag=AD08_RS19985;product=protein YaiA;protein_id=WP_001142439.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 21577 22254 . + . ID=gene-AD08_RS19980;Name=AD08_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19980;old_locus_tag=AD08_0402 NZ_JHDJ01000113.1 Protein Homology CDS 21577 22254 . + 0 ID=cds-WP_001276420.1;Parent=gene-AD08_RS19980;Dbxref=Genbank:WP_001276420.1;Name=WP_001276420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414924.1;locus_tag=AD08_RS19980;product=AroM family protein;protein_id=WP_001276420.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 22326 22610 . + . ID=gene-AD08_RS19975;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=AD08_RS19975;old_locus_tag=AD08_0403 NZ_JHDJ01000113.1 Protein Homology CDS 22326 22610 . + 0 ID=cds-WP_001396715.1;Parent=gene-AD08_RS19975;Dbxref=Genbank:WP_001396715.1;Name=WP_001396715.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308468.1;locus_tag=AD08_RS19975;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_001396715.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq pseudogene 22758 23099 . + . ID=gene-AD08_RS19970;Name=AD08_RS19970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS19970;old_locus_tag=AD08_0404;partial=true;pseudo=true;start_range=.,22758 NZ_JHDJ01000113.1 Protein Homology CDS 22758 23099 . + 0 ID=cds-AD08_RS19970;Parent=gene-AD08_RS19970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308469.2;locus_tag=AD08_RS19970;partial=true;product=DUF2773 domain-containing protein;pseudo=true;start_range=.,22758;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 23096 23179 . + . ID=gene-AD08_RS31590;Name=AD08_RS31590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31590 NZ_JHDJ01000113.1 Protein Homology CDS 23096 23179 . + 0 ID=cds-WP_120795376.1;Parent=gene-AD08_RS31590;Dbxref=Genbank:WP_120795376.1;Name=WP_120795376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518750.1;locus_tag=AD08_RS31590;product=protein YkiD;protein_id=WP_120795376.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 23257 24168 . - . ID=gene-AD08_RS19965;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=AD08_RS19965;old_locus_tag=AD08_0405 NZ_JHDJ01000113.1 Protein Homology CDS 23257 24168 . - 0 ID=cds-WP_001298537.1;Parent=gene-AD08_RS19965;Dbxref=Genbank:WP_001298537.1;Name=WP_001298537.1;gbkey=CDS;gene=rdgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=AD08_RS19965;product=recombination-associated protein RdgC;protein_id=WP_001298537.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 24293 25201 . + . ID=gene-AD08_RS19960;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=AD08_RS19960;old_locus_tag=AD08_0406 NZ_JHDJ01000113.1 Protein Homology CDS 24293 25201 . + 0 ID=cds-WP_032218160.1;Parent=gene-AD08_RS19960;Dbxref=Genbank:WP_032218160.1;Name=WP_032218160.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414928.2;locus_tag=AD08_RS19960;product=fructokinase;protein_id=WP_032218160.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 25446 26630 . - . ID=gene-AD08_RS19955;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=AD08_RS19955;old_locus_tag=AD08_0408 NZ_JHDJ01000113.1 Protein Homology CDS 25446 26630 . - 0 ID=cds-WP_001326926.1;Parent=gene-AD08_RS19955;Dbxref=Genbank:WP_001326926.1;Name=WP_001326926.1;gbkey=CDS;gene=araJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414930.3;locus_tag=AD08_RS19955;product=MFS transporter AraJ;protein_id=WP_001326926.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 26756 29902 . - . ID=gene-AD08_RS19950;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=AD08_RS19950;old_locus_tag=AD08_0409 NZ_JHDJ01000113.1 Protein Homology CDS 26756 29902 . - 0 ID=cds-WP_032218161.1;Parent=gene-AD08_RS19950;Dbxref=Genbank:WP_032218161.1;Name=WP_032218161.1;gbkey=CDS;gene=sbcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414931.1;locus_tag=AD08_RS19950;product=exonuclease subunit SbcC;protein_id=WP_032218161.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 29899 31101 . - . ID=gene-AD08_RS19945;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=AD08_RS19945;old_locus_tag=AD08_0410 NZ_JHDJ01000113.1 Protein Homology CDS 29899 31101 . - 0 ID=cds-WP_001221319.1;Parent=gene-AD08_RS19945;Dbxref=Genbank:WP_001221319.1;Name=WP_001221319.1;gbkey=CDS;gene=sbcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308475.1;locus_tag=AD08_RS19945;product=exonuclease subunit SbcD;protein_id=WP_001221319.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 31291 31980 . + . ID=gene-AD08_RS19940;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=AD08_RS19940;old_locus_tag=AD08_0411 NZ_JHDJ01000113.1 Protein Homology CDS 31291 31980 . + 0 ID=cds-WP_000113933.1;Parent=gene-AD08_RS19940;Dbxref=Genbank:WP_000113933.1;Name=WP_000113933.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=AD08_RS19940;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113933.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 32038 33333 . + . ID=gene-AD08_RS19935;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=AD08_RS19935;old_locus_tag=AD08_0412 NZ_JHDJ01000113.1 Protein Homology CDS 32038 33333 . + 0 ID=cds-WP_032181876.1;Parent=gene-AD08_RS19935;Dbxref=Genbank:WP_032181876.1;Name=WP_032181876.1;gbkey=CDS;gene=phoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414934.1;locus_tag=AD08_RS19935;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_032181876.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 33740 35059 . + . ID=gene-AD08_RS19930;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=AD08_RS19930;old_locus_tag=AD08_0414 NZ_JHDJ01000113.1 Protein Homology CDS 33740 35059 . + 0 ID=cds-WP_032218163.1;Parent=gene-AD08_RS19930;Dbxref=Genbank:WP_032218163.1;Name=WP_032218163.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308478.1;locus_tag=AD08_RS19930;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_032218163.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 35135 36508 . + . ID=gene-AD08_RS19925;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=AD08_RS19925;old_locus_tag=AD08_0415 NZ_JHDJ01000113.1 Protein Homology CDS 35135 36508 . + 0 ID=cds-WP_024167973.1;Parent=gene-AD08_RS19925;Dbxref=Genbank:WP_024167973.1;Name=WP_024167973.1;gbkey=CDS;gene=proY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308479.1;locus_tag=AD08_RS19925;product=proline-specific permease ProY;protein_id=WP_024167973.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 36664 38481 . + . ID=gene-AD08_RS19920;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=AD08_RS19920;old_locus_tag=AD08_0416 NZ_JHDJ01000113.1 Protein Homology CDS 36664 38481 . + 0 ID=cds-WP_032218165.1;Parent=gene-AD08_RS19920;Dbxref=Genbank:WP_032218165.1;Name=WP_032218165.1;gbkey=CDS;gene=malZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706291.1;locus_tag=AD08_RS19920;product=maltodextrin glucosidase;protein_id=WP_032218165.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 38486 39067 . - . ID=gene-AD08_RS19915;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=AD08_RS19915;old_locus_tag=AD08_0417 NZ_JHDJ01000113.1 Protein Homology CDS 38486 39067 . - 0 ID=cds-WP_001009885.1;Parent=gene-AD08_RS19915;Dbxref=Genbank:WP_001009885.1;Name=WP_001009885.1;gbkey=CDS;gene=acpH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414938.1;locus_tag=AD08_RS19915;product=ACP phosphodiesterase;protein_id=WP_001009885.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 39160 40230 . + . ID=gene-AD08_RS19910;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=AD08_RS19910;old_locus_tag=AD08_0418 NZ_JHDJ01000113.1 Protein Homology CDS 39160 40230 . + 0 ID=cds-WP_001266503.1;Parent=gene-AD08_RS19910;Dbxref=Genbank:WP_001266503.1;Name=WP_001266503.1;gbkey=CDS;gene=queA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308483.1;locus_tag=AD08_RS19910;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266503.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 40286 41413 . + . ID=gene-AD08_RS19905;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=AD08_RS19905;old_locus_tag=AD08_0419 NZ_JHDJ01000113.1 Protein Homology CDS 40286 41413 . + 0 ID=cds-WP_000667319.1;Parent=gene-AD08_RS19905;Dbxref=Genbank:WP_000667319.1;Name=WP_000667319.1;gbkey=CDS;gene=tgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=AD08_RS19905;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667319.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 41436 41768 . + . ID=gene-AD08_RS19900;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=AD08_RS19900;old_locus_tag=AD08_0420 NZ_JHDJ01000113.1 Protein Homology CDS 41436 41768 . + 0 ID=cds-WP_000007629.1;Parent=gene-AD08_RS19900;Dbxref=Genbank:WP_000007629.1;Name=WP_000007629.1;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=AD08_RS19900;product=preprotein translocase subunit YajC;protein_id=WP_000007629.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 41796 43643 . + . ID=gene-AD08_RS19895;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AD08_RS19895;old_locus_tag=AD08_0421 NZ_JHDJ01000113.1 Protein Homology CDS 41796 43643 . + 0 ID=cds-WP_000934822.1;Parent=gene-AD08_RS19895;Dbxref=Genbank:WP_000934822.1;Name=WP_000934822.1;gbkey=CDS;gene=secD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=AD08_RS19895;product=protein translocase subunit SecD;protein_id=WP_000934822.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 43654 44625 . + . ID=gene-AD08_RS19890;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=AD08_RS19890;old_locus_tag=AD08_0422 NZ_JHDJ01000113.1 Protein Homology CDS 43654 44625 . + 0 ID=cds-WP_000046637.1;Parent=gene-AD08_RS19890;Dbxref=Genbank:WP_000046637.1;Name=WP_000046637.1;gbkey=CDS;gene=secF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308487.1;locus_tag=AD08_RS19890;product=protein translocase subunit SecF;protein_id=WP_000046637.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 44754 45101 . + . ID=gene-AD08_RS19885;Name=AD08_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19885;old_locus_tag=AD08_0423 NZ_JHDJ01000113.1 Protein Homology CDS 44754 45101 . + 0 ID=cds-WP_000974813.1;Parent=gene-AD08_RS19885;Dbxref=Genbank:WP_000974813.1;Name=WP_000974813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308490.1;locus_tag=AD08_RS19885;product=HNH nuclease family protein;protein_id=WP_000974813.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 45278 46162 . - . ID=gene-AD08_RS19880;Name=AD08_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19880;old_locus_tag=AD08_0424 NZ_JHDJ01000113.1 Protein Homology CDS 45278 46162 . - 0 ID=cds-WP_001295328.1;Parent=gene-AD08_RS19880;Dbxref=Genbank:WP_001295328.1;Name=WP_001295328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308491.1;locus_tag=AD08_RS19880;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_001295328.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 46461 47000 . - . ID=gene-AD08_RS19875;Name=AD08_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19875;old_locus_tag=AD08_0425 NZ_JHDJ01000113.1 Protein Homology CDS 46461 47000 . - 0 ID=cds-WP_001326929.1;Parent=gene-AD08_RS19875;Dbxref=Genbank:WP_001326929.1;Name=WP_001326929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414946.4;locus_tag=AD08_RS19875;product=DUF3251 domain-containing protein;protein_id=WP_001326929.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 47151 47600 . + . ID=gene-AD08_RS0125035;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=AD08_RS0125035 NZ_JHDJ01000113.1 Protein Homology CDS 47151 47600 . + 0 ID=cds-WP_000543535.1;Parent=gene-AD08_RS0125035;Dbxref=Genbank:WP_000543535.1;Name=WP_000543535.1;gbkey=CDS;gene=nrdR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=AD08_RS0125035;product=transcriptional regulator NrdR;protein_id=WP_000543535.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 47604 48707 . + . ID=gene-AD08_RS19870;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AD08_RS19870;old_locus_tag=AD08_0427 NZ_JHDJ01000113.1 Protein Homology CDS 47604 48707 . + 0 ID=cds-WP_001150457.1;Parent=gene-AD08_RS19870;Dbxref=Genbank:WP_001150457.1;Name=WP_001150457.1;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414948.1;locus_tag=AD08_RS19870;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150457.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 48796 49266 . + . ID=gene-AD08_RS19865;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=AD08_RS19865;old_locus_tag=AD08_0428 NZ_JHDJ01000113.1 Protein Homology CDS 48796 49266 . + 0 ID=cds-WP_001481363.1;Parent=gene-AD08_RS19865;Dbxref=Genbank:WP_001481363.1;Name=WP_001481363.1;gbkey=CDS;gene=ribE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=AD08_RS19865;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001481363.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 49286 49705 . + . ID=gene-AD08_RS19860;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=AD08_RS19860;old_locus_tag=AD08_0429 NZ_JHDJ01000113.1 Protein Homology CDS 49286 49705 . + 0 ID=cds-WP_000801125.1;Parent=gene-AD08_RS19860;Dbxref=Genbank:WP_000801125.1;Name=WP_000801125.1;gbkey=CDS;gene=nusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308496.1;locus_tag=AD08_RS19860;product=transcription antitermination factor NusB;protein_id=WP_000801125.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 49783 50760 . + . ID=gene-AD08_RS19855;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=AD08_RS19855;old_locus_tag=AD08_0430 NZ_JHDJ01000113.1 Protein Homology CDS 49783 50760 . + 0 ID=cds-WP_000742109.1;Parent=gene-AD08_RS19855;Dbxref=Genbank:WP_000742109.1;Name=WP_000742109.1;gbkey=CDS;gene=thiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414951.1;locus_tag=AD08_RS19855;product=thiamine-phosphate kinase;protein_id=WP_000742109.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 50738 51256 . + . ID=gene-AD08_RS19850;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=AD08_RS19850;old_locus_tag=AD08_0431 NZ_JHDJ01000113.1 Protein Homology CDS 50738 51256 . + 0 ID=cds-WP_000154044.1;Parent=gene-AD08_RS19850;Dbxref=Genbank:WP_000154044.1;Name=WP_000154044.1;gbkey=CDS;gene=pgpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414952.1;locus_tag=AD08_RS19850;product=phosphatidylglycerophosphatase A;protein_id=WP_000154044.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 51310 52284 . - . ID=gene-AD08_RS19845;Name=yajO;gbkey=Gene;gene=yajO;gene_biotype=protein_coding;locus_tag=AD08_RS19845;old_locus_tag=AD08_0432 NZ_JHDJ01000113.1 Protein Homology CDS 51310 52284 . - 0 ID=cds-WP_001199800.1;Parent=gene-AD08_RS19845;Dbxref=Genbank:WP_001199800.1;Name=WP_001199800.1;gbkey=CDS;gene=yajO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414953.2;locus_tag=AD08_RS19845;product=1-deoxyxylulose-5-phosphate synthase YajO;protein_id=WP_001199800.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 52464 54326 . - . ID=gene-AD08_RS19840;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=AD08_RS19840;old_locus_tag=AD08_0433 NZ_JHDJ01000113.1 Protein Homology CDS 52464 54326 . - 0 ID=cds-WP_000006797.1;Parent=gene-AD08_RS19840;Dbxref=Genbank:WP_000006797.1;Name=WP_000006797.1;gbkey=CDS;gene=dxs;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414954.1;locus_tag=AD08_RS19840;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006797.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 54351 55250 . - . ID=gene-AD08_RS19835;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=AD08_RS19835;old_locus_tag=AD08_0434 NZ_JHDJ01000113.1 Protein Homology CDS 54351 55250 . - 0 ID=cds-WP_000347217.1;Parent=gene-AD08_RS19835;Dbxref=Genbank:WP_000347217.1;Name=WP_000347217.1;gbkey=CDS;gene=ispA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414955.1;locus_tag=AD08_RS19835;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000347217.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 55250 55492 . - . ID=gene-AD08_RS19830;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=AD08_RS19830;old_locus_tag=AD08_0435 NZ_JHDJ01000113.1 Protein Homology CDS 55250 55492 . - 0 ID=cds-WP_001124935.1;Parent=gene-AD08_RS19830;Dbxref=Genbank:WP_001124935.1;Name=WP_001124935.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571292.1;locus_tag=AD08_RS19830;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124935.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 55698 57146 . + . ID=gene-AD08_RS19825;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=AD08_RS19825;old_locus_tag=AD08_0436 NZ_JHDJ01000113.1 Protein Homology CDS 55698 57146 . + 0 ID=cds-WP_000668662.1;Parent=gene-AD08_RS19825;Dbxref=Genbank:WP_000668662.1;Name=WP_000668662.1;gbkey=CDS;gene=thiI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=AD08_RS19825;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WP_000668662.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 57200 57790 . - . ID=gene-AD08_RS19820;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=AD08_RS19820;old_locus_tag=AD08_0437 NZ_JHDJ01000113.1 Protein Homology CDS 57200 57790 . - 0 ID=cds-WP_001276305.1;Parent=gene-AD08_RS19820;Dbxref=Genbank:WP_001276305.1;Name=WP_001276305.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414958.4;locus_tag=AD08_RS19820;product=protein deglycase YajL;protein_id=WP_001276305.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 57753 58664 . - . ID=gene-AD08_RS19815;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=AD08_RS19815;old_locus_tag=AD08_0438 NZ_JHDJ01000113.1 Protein Homology CDS 57753 58664 . - 0 ID=cds-WP_001695435.1;Parent=gene-AD08_RS19815;Dbxref=Genbank:WP_001695435.1;Name=WP_001695435.1;gbkey=CDS;gene=panE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414959.1;locus_tag=AD08_RS19815;product=2-dehydropantoate 2-reductase;protein_id=WP_001695435.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 58832 59323 . + . ID=gene-AD08_RS19810;Name=yajQ;gbkey=Gene;gene=yajQ;gene_biotype=protein_coding;locus_tag=AD08_RS19810;old_locus_tag=AD08_0439 NZ_JHDJ01000113.1 Protein Homology CDS 58832 59323 . + 0 ID=cds-WP_001138904.1;Parent=gene-AD08_RS19810;Dbxref=Genbank:WP_001138904.1;Name=WP_001138904.1;gbkey=CDS;gene=yajQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414960.2;locus_tag=AD08_RS19810;product=nucleotide binding protein YajQ;protein_id=WP_001138904.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 59451 60815 . - . ID=gene-AD08_RS19805;Name=AD08_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19805;old_locus_tag=AD08_0440 NZ_JHDJ01000113.1 Protein Homology CDS 59451 60815 . - 0 ID=cds-WP_001000963.1;Parent=gene-AD08_RS19805;Dbxref=Genbank:WP_001000963.1;Name=WP_001000963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414961.4;locus_tag=AD08_RS19805;product=MFS transporter;protein_id=WP_001000963.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 60964 61854 . - . ID=gene-AD08_RS19800;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=AD08_RS19800;old_locus_tag=AD08_0441 NZ_JHDJ01000113.1 Protein Homology CDS 60964 61854 . - 0 ID=cds-WP_000971336.1;Parent=gene-AD08_RS19800;Dbxref=Genbank:WP_000971336.1;Name=WP_000971336.1;gbkey=CDS;gene=cyoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308509.1;locus_tag=AD08_RS19800;product=protoheme IX farnesyltransferase;protein_id=WP_000971336.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 61866 62195 . - . ID=gene-AD08_RS19795;Name=AD08_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19795;old_locus_tag=AD08_0442 NZ_JHDJ01000113.1 Protein Homology CDS 61866 62195 . - 0 ID=cds-WP_000019869.1;Parent=gene-AD08_RS19795;Dbxref=Genbank:WP_000019869.1;Name=WP_000019869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308510.1;locus_tag=AD08_RS19795;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019869.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 62195 62809 . - . ID=gene-AD08_RS19790;Name=AD08_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19790;old_locus_tag=AD08_0443 NZ_JHDJ01000113.1 Protein Homology CDS 62195 62809 . - 0 ID=cds-WP_000179819.1;Parent=gene-AD08_RS19790;Dbxref=Genbank:WP_000179819.1;Name=WP_000179819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414964.1;locus_tag=AD08_RS19790;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179819.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 62799 64790 . - . ID=gene-AD08_RS19785;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=AD08_RS19785;old_locus_tag=AD08_0444 NZ_JHDJ01000113.1 Protein Homology CDS 62799 64790 . - 0 ID=cds-WP_032218168.1;Parent=gene-AD08_RS19785;Dbxref=Genbank:WP_032218168.1;Name=WP_032218168.1;gbkey=CDS;gene=cyoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=AD08_RS19785;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_032218168.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 64812 65759 . - . ID=gene-AD08_RS19780;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=AD08_RS19780;old_locus_tag=AD08_0445 NZ_JHDJ01000113.1 Protein Homology CDS 64812 65759 . - 0 ID=cds-WP_001239436.1;Parent=gene-AD08_RS19780;Dbxref=Genbank:WP_001239436.1;Name=WP_001239436.1;gbkey=CDS;gene=cyoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414966.1;locus_tag=AD08_RS19780;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239436.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 66219 67694 . - . ID=gene-AD08_RS19775;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=AD08_RS19775;old_locus_tag=AD08_0446 NZ_JHDJ01000113.1 Protein Homology CDS 66219 67694 . - 0 ID=cds-WP_000098429.1;Parent=gene-AD08_RS19775;Dbxref=Genbank:WP_000098429.1;Name=WP_000098429.1;gbkey=CDS;gene=ampG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308514.1;locus_tag=AD08_RS19775;product=muropeptide MFS transporter AmpG;protein_id=WP_000098429.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 67738 68316 . - . ID=gene-AD08_RS19770;Name=AD08_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19770;old_locus_tag=AD08_0447 NZ_JHDJ01000113.1 Protein Homology CDS 67738 68316 . - 0 ID=cds-WP_001295326.1;Parent=gene-AD08_RS19770;Dbxref=Genbank:WP_001295326.1;Name=WP_001295326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414968.4;locus_tag=AD08_RS19770;product=lipoprotein;protein_id=WP_001295326.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 68621 68938 . + . ID=gene-AD08_RS19765;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=AD08_RS19765;old_locus_tag=AD08_0448 NZ_JHDJ01000113.1 Protein Homology CDS 68621 68938 . + 0 ID=cds-WP_000973448.1;Parent=gene-AD08_RS19765;Dbxref=Genbank:WP_000973448.1;Name=WP_000973448.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414969.4;locus_tag=AD08_RS19765;product=transcriptional regulator BolA;protein_id=WP_000973448.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 69282 70580 . + . ID=gene-AD08_RS19755;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=AD08_RS19755;old_locus_tag=AD08_0450 NZ_JHDJ01000113.1 Protein Homology CDS 69282 70580 . + 0 ID=cds-WP_001198386.1;Parent=gene-AD08_RS19755;Dbxref=Genbank:WP_001198386.1;Name=WP_001198386.1;gbkey=CDS;gene=tig;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=AD08_RS19755;product=trigger factor;protein_id=WP_001198386.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 70826 71449 . + . ID=gene-AD08_RS19750;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=AD08_RS19750;old_locus_tag=AD08_0451 NZ_JHDJ01000113.1 Protein Homology CDS 70826 71449 . + 0 ID=cds-WP_000122253.1;Parent=gene-AD08_RS19750;Dbxref=Genbank:WP_000122253.1;Name=WP_000122253.1;gbkey=CDS;gene=clpP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308518.1;locus_tag=AD08_RS19750;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122253.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 71575 72849 . + . ID=gene-AD08_RS19745;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AD08_RS19745;old_locus_tag=AD08_0452 NZ_JHDJ01000113.1 Protein Homology CDS 71575 72849 . + 0 ID=cds-WP_000130305.1;Parent=gene-AD08_RS19745;Dbxref=Genbank:WP_000130305.1;Name=WP_000130305.1;gbkey=CDS;gene=clpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=AD08_RS19745;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130305.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 73037 75391 . + . ID=gene-AD08_RS19740;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=AD08_RS19740;old_locus_tag=AD08_0453 NZ_JHDJ01000113.1 Protein Homology CDS 73037 75391 . + 0 ID=cds-WP_001295325.1;Parent=gene-AD08_RS19740;Dbxref=Genbank:WP_001295325.1;Name=WP_001295325.1;gbkey=CDS;gene=lon;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=AD08_RS19740;product=endopeptidase La;protein_id=WP_001295325.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 75600 75872 . + . ID=gene-AD08_RS19735;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=AD08_RS19735;old_locus_tag=AD08_0454 NZ_JHDJ01000113.1 Protein Homology CDS 75600 75872 . + 0 ID=cds-WP_001043542.1;Parent=gene-AD08_RS19735;Dbxref=Genbank:WP_001043542.1;Name=WP_001043542.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1;locus_tag=AD08_RS19735;product=DNA-binding protein HU-beta;protein_id=WP_001043542.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 76064 77935 . + . ID=gene-AD08_RS19730;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=AD08_RS19730;old_locus_tag=AD08_0455 NZ_JHDJ01000113.1 Protein Homology CDS 76064 77935 . + 0 ID=cds-WP_000969372.1;Parent=gene-AD08_RS19730;Dbxref=Genbank:WP_000969372.1;Name=WP_000969372.1;gbkey=CDS;gene=ppiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414975.1;locus_tag=AD08_RS19730;product=peptidylprolyl isomerase;protein_id=WP_000969372.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 78086 78457 . + . ID=gene-AD08_RS19725;Name=AD08_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19725;old_locus_tag=AD08_0456 NZ_JHDJ01000113.1 Protein Homology CDS 78086 78457 . + 0 ID=cds-WP_000680312.1;Parent=gene-AD08_RS19725;Dbxref=Genbank:WP_000680312.1;Name=WP_000680312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414976.1;locus_tag=AD08_RS19725;product=hypothetical protein;protein_id=WP_000680312.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 78551 78949 . + . ID=gene-AD08_RS19720;Name=AD08_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19720;old_locus_tag=AD08_0457 NZ_JHDJ01000113.1 Protein Homology CDS 78551 78949 . + 0 ID=cds-WP_001194534.1;Parent=gene-AD08_RS19720;Dbxref=Genbank:WP_001194534.1;Name=WP_001194534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414977.1;locus_tag=AD08_RS19720;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194534.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 79001 79696 . - . ID=gene-AD08_RS19715;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=AD08_RS19715;old_locus_tag=AD08_0458 NZ_JHDJ01000113.1 Protein Homology CDS 79001 79696 . - 0 ID=cds-WP_000817220.1;Parent=gene-AD08_RS19715;Dbxref=Genbank:WP_000817220.1;Name=WP_000817220.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414978.1;locus_tag=AD08_RS19715;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817220.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 79761 81461 . - . ID=gene-AD08_RS19710;Name=AD08_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19710;old_locus_tag=AD08_0459 NZ_JHDJ01000113.1 Protein Homology CDS 79761 81461 . - 0 ID=cds-WP_032218172.1;Parent=gene-AD08_RS19710;Dbxref=Genbank:WP_032218172.1;Name=WP_032218172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414979.1;locus_tag=AD08_RS19710;product=SgrR family transcriptional regulator;protein_id=WP_032218172.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 81561 82379 . + . ID=gene-AD08_RS19705;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=AD08_RS19705;old_locus_tag=AD08_0460 NZ_JHDJ01000113.1 Protein Homology CDS 81561 82379 . + 0 ID=cds-WP_001336137.1;Parent=gene-AD08_RS19705;Dbxref=Genbank:WP_001336137.1;Name=WP_001336137.1;gbkey=CDS;gene=cof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414980.2;locus_tag=AD08_RS19705;product=HMP-PP phosphatase;protein_id=WP_001336137.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 82532 82990 . + . ID=gene-AD08_RS19700;Name=AD08_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19700;old_locus_tag=AD08_0461 NZ_JHDJ01000113.1 Protein Homology CDS 82532 82990 . + 0 ID=cds-WP_000884589.1;Parent=gene-AD08_RS19700;Dbxref=Genbank:WP_000884589.1;Name=WP_000884589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308528.2;locus_tag=AD08_RS19700;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884589.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 83020 84792 . + . ID=gene-AD08_RS19695;Name=AD08_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19695;old_locus_tag=AD08_0462 NZ_JHDJ01000113.1 Protein Homology CDS 83020 84792 . + 0 ID=cds-WP_001235649.1;Parent=gene-AD08_RS19695;Dbxref=Genbank:WP_001235649.1;Name=WP_001235649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414982.1;locus_tag=AD08_RS19695;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235649.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 84785 86566 . + . ID=gene-AD08_RS19690;Name=AD08_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19690;old_locus_tag=AD08_0463 NZ_JHDJ01000113.1 Protein Homology CDS 84785 86566 . + 0 ID=cds-WP_001256201.1;Parent=gene-AD08_RS19690;Dbxref=Genbank:WP_001256201.1;Name=WP_001256201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308530.1;locus_tag=AD08_RS19690;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256201.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 86747 87085 . + . ID=gene-AD08_RS19685;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=AD08_RS19685;old_locus_tag=AD08_0465 NZ_JHDJ01000113.1 Protein Homology CDS 86747 87085 . + 0 ID=cds-WP_000780338.1;Parent=gene-AD08_RS19685;Dbxref=Genbank:WP_000780338.1;Name=WP_000780338.1;gbkey=CDS;gene=glnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308531.1;locus_tag=AD08_RS19685;product=P-II family nitrogen regulator;protein_id=WP_000780338.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 87115 88401 . + . ID=gene-AD08_RS19680;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=AD08_RS19680;old_locus_tag=AD08_0466 NZ_JHDJ01000113.1 Protein Homology CDS 87115 88401 . + 0 ID=cds-WP_032218174.1;Parent=gene-AD08_RS19680;Dbxref=Genbank:WP_032218174.1;Name=WP_032218174.1;gbkey=CDS;gene=amtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308532.1;locus_tag=AD08_RS19680;product=ammonium transporter AmtB;protein_id=WP_032218174.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 88450 89310 . - . ID=gene-AD08_RS19675;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=AD08_RS19675;old_locus_tag=AD08_0467 NZ_JHDJ01000113.1 Protein Homology CDS 88450 89310 . - 0 ID=cds-WP_000075876.1;Parent=gene-AD08_RS19675;Dbxref=Genbank:WP_000075876.1;Name=WP_000075876.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308533.1;locus_tag=AD08_RS19675;product=acyl-CoA thioesterase II;protein_id=WP_000075876.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 89528 90100 . + . ID=gene-AD08_RS19670;Name=AD08_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19670;old_locus_tag=AD08_0468 NZ_JHDJ01000113.1 Protein Homology CDS 89528 90100 . + 0 ID=cds-WP_000779831.1;Parent=gene-AD08_RS19670;Dbxref=Genbank:WP_000779831.1;Name=WP_000779831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706347.1;locus_tag=AD08_RS19670;product=hypothetical protein;protein_id=WP_000779831.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 90131 90442 . - . ID=gene-AD08_RS19665;Name=AD08_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19665;old_locus_tag=AD08_0469 NZ_JHDJ01000113.1 Protein Homology CDS 90131 90442 . - 0 ID=cds-WP_001398712.1;Parent=gene-AD08_RS19665;Dbxref=Genbank:WP_001398712.1;Name=WP_001398712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706349.2;locus_tag=AD08_RS19665;product=MGMT family protein;protein_id=WP_001398712.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 90605 90701 . + . ID=gene-AD08_RS27420;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=AD08_RS27420 NZ_JHDJ01000113.1 cmsearch SRP_RNA 90605 90701 . + . ID=rna-AD08_RS27420;Parent=gene-AD08_RS27420;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27420;product=signal recognition particle sRNA small type NZ_JHDJ01000113.1 cmsearch exon 90605 90701 . + . ID=exon-AD08_RS27420-1;Parent=rna-AD08_RS27420;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27420;product=signal recognition particle sRNA small type NZ_JHDJ01000113.1 RefSeq gene 90821 91174 . + . ID=gene-AD08_RS19660;Name=AD08_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19660;old_locus_tag=AD08_0470 NZ_JHDJ01000113.1 Protein Homology CDS 90821 91174 . + 0 ID=cds-WP_000878140.1;Parent=gene-AD08_RS19660;Dbxref=Genbank:WP_000878140.1;Name=WP_000878140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308536.1;locus_tag=AD08_RS19660;product=DUF1428 domain-containing protein;protein_id=WP_000878140.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 91216 92766 . - . ID=gene-AD08_RS19655;Name=pdeB;gbkey=Gene;gene=pdeB;gene_biotype=protein_coding;locus_tag=AD08_RS19655;old_locus_tag=AD08_0471 NZ_JHDJ01000113.1 Protein Homology CDS 91216 92766 . - 0 ID=cds-WP_032218187.1;Parent=gene-AD08_RS19655;Dbxref=Genbank:WP_032218187.1;Name=WP_032218187.1;gbkey=CDS;gene=pdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414990.2;locus_tag=AD08_RS19655;product=cyclic-guanylate-specific phosphodiesterase PdeB;protein_id=WP_032218187.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 92930 93400 . - . ID=gene-AD08_RS19650;Name=AD08_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19650;old_locus_tag=AD08_0472 NZ_JHDJ01000113.1 Protein Homology CDS 92930 93400 . - 0 ID=cds-WP_000136192.1;Parent=gene-AD08_RS19650;Dbxref=Genbank:WP_000136192.1;Name=WP_000136192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308538.2;locus_tag=AD08_RS19650;product=hypothetical protein;protein_id=WP_000136192.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 93516 94067 . - . ID=gene-AD08_RS19645;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=AD08_RS19645;old_locus_tag=AD08_0473 NZ_JHDJ01000113.1 Protein Homology CDS 93516 94067 . - 0 ID=cds-WP_000102564.1;Parent=gene-AD08_RS19645;Dbxref=Genbank:WP_000102564.1;Name=WP_000102564.1;gbkey=CDS;gene=maa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414992.1;locus_tag=AD08_RS19645;product=maltose O-acetyltransferase;protein_id=WP_000102564.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 94239 94457 . - . ID=gene-AD08_RS19640;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AD08_RS19640;old_locus_tag=AD08_0474 NZ_JHDJ01000113.1 Protein Homology CDS 94239 94457 . - 0 ID=cds-WP_001291435.1;Parent=gene-AD08_RS19640;Dbxref=Genbank:WP_001291435.1;Name=WP_001291435.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308540.1;locus_tag=AD08_RS19640;product=hemolysin expression modulator Hha;protein_id=WP_001291435.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 94483 94857 . - . ID=gene-AD08_RS19635;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=AD08_RS19635;old_locus_tag=AD08_0475 NZ_JHDJ01000113.1 Protein Homology CDS 94483 94857 . - 0 ID=cds-WP_000344800.1;Parent=gene-AD08_RS19635;Dbxref=Genbank:WP_000344800.1;Name=WP_000344800.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=AD08_RS19635;product=Hha toxicity modulator TomB;protein_id=WP_000344800.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 95403 98552 . - . ID=gene-AD08_RS19630;Name=AD08_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19630;old_locus_tag=AD08_0476 NZ_JHDJ01000113.1 Protein Homology CDS 95403 98552 . - 0 ID=cds-WP_001132469.1;Parent=gene-AD08_RS19630;Dbxref=Genbank:WP_001132469.1;Name=WP_001132469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414995.1;locus_tag=AD08_RS19630;product=multidrug efflux RND transporter permease subunit;protein_id=WP_001132469.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 98575 99768 . - . ID=gene-AD08_RS19625;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=AD08_RS19625;old_locus_tag=AD08_0477 NZ_JHDJ01000113.1 Protein Homology CDS 98575 99768 . - 0 ID=cds-WP_001295324.1;Parent=gene-AD08_RS19625;Dbxref=Genbank:WP_001295324.1;Name=WP_001295324.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308543.1;locus_tag=AD08_RS19625;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001295324.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 99910 100557 . + . ID=gene-AD08_RS19620;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=AD08_RS19620;old_locus_tag=AD08_0478 NZ_JHDJ01000113.1 Protein Homology CDS 99910 100557 . + 0 ID=cds-WP_000101737.1;Parent=gene-AD08_RS19620;Dbxref=Genbank:WP_000101737.1;Name=WP_000101737.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414997.1;locus_tag=AD08_RS19620;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101737.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 100685 104047 . + . ID=gene-AD08_RS19615;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=AD08_RS19615;old_locus_tag=AD08_0479 NZ_JHDJ01000113.1 Protein Homology CDS 100685 104047 . + 0 ID=cds-WP_000177732.1;Parent=gene-AD08_RS19615;Dbxref=Genbank:WP_000177732.1;Name=WP_000177732.1;gbkey=CDS;gene=mscK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414998.1;locus_tag=AD08_RS19615;product=mechanosensitive channel MscK;protein_id=WP_000177732.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 104259 104420 . - . ID=gene-AD08_RS19610;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=AD08_RS19610;old_locus_tag=AD08_0480 NZ_JHDJ01000113.1 Protein Homology CDS 104259 104420 . - 0 ID=cds-WP_000051153.1;Parent=gene-AD08_RS19610;Dbxref=Genbank:WP_000051153.1;Name=WP_000051153.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414999.1;locus_tag=AD08_RS19610;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051153.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 104434 104961 . - . ID=gene-AD08_RS19605;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=AD08_RS19605;old_locus_tag=AD08_0481 NZ_JHDJ01000113.1 Protein Homology CDS 104434 104961 . - 0 ID=cds-WP_000844874.1;Parent=gene-AD08_RS19605;Dbxref=Genbank:WP_000844874.1;Name=WP_000844874.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415000.1;locus_tag=AD08_RS19605;product=primosomal replication protein N'';protein_id=WP_000844874.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 105031 105408 . + . ID=gene-AD08_RS19600;Name=AD08_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19600;old_locus_tag=AD08_0482 NZ_JHDJ01000113.1 Protein Homology CDS 105031 105408 . + 0 ID=cds-WP_001188905.1;Parent=gene-AD08_RS19600;Dbxref=Genbank:WP_001188905.1;Name=WP_001188905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308548.1;locus_tag=AD08_RS19600;product=DUF454 family protein;protein_id=WP_001188905.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 105561 106112 . + . ID=gene-AD08_RS19595;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=AD08_RS19595;old_locus_tag=AD08_0483 NZ_JHDJ01000113.1 Protein Homology CDS 105561 106112 . + 0 ID=cds-WP_032218179.1;Parent=gene-AD08_RS19595;Dbxref=Genbank:WP_032218179.1;Name=WP_032218179.1;gbkey=CDS;gene=apt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415002.1;locus_tag=AD08_RS19595;product=adenine phosphoribosyltransferase;protein_id=WP_032218179.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 106241 108172 . + . ID=gene-AD08_RS19590;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=AD08_RS19590;old_locus_tag=AD08_0484 NZ_JHDJ01000113.1 Protein Homology CDS 106241 108172 . + 0 ID=cds-WP_000122013.1;Parent=gene-AD08_RS19590;Dbxref=Genbank:WP_000122013.1;Name=WP_000122013.1;gbkey=CDS;gene=dnaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415003.1;locus_tag=AD08_RS19590;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000122013.1;transl_table=11 NZ_JHDJ01000113.1 cmsearch sequence_feature 107505 107569 . + . ID=id-AD08_RS19590;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS19590 NZ_JHDJ01000113.1 RefSeq gene 108225 108554 . + . ID=gene-AD08_RS19585;Name=AD08_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19585;old_locus_tag=AD08_0485 NZ_JHDJ01000113.1 Protein Homology CDS 108225 108554 . + 0 ID=cds-WP_000467098.1;Parent=gene-AD08_RS19585;Dbxref=Genbank:WP_000467098.1;Name=WP_000467098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=AD08_RS19585;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 108554 109159 . + . ID=gene-AD08_RS19580;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AD08_RS19580;old_locus_tag=AD08_0486 NZ_JHDJ01000113.1 Protein Homology CDS 108554 109159 . + 0 ID=cds-WP_001195025.1;Parent=gene-AD08_RS19580;Dbxref=Genbank:WP_001195025.1;Name=WP_001195025.1;gbkey=CDS;gene=recR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308552.1;locus_tag=AD08_RS19580;product=recombination protein RecR;protein_id=WP_001195025.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 109269 111143 . + . ID=gene-AD08_RS19575;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=AD08_RS19575;old_locus_tag=AD08_0487 NZ_JHDJ01000113.1 Protein Homology CDS 109269 111143 . + 0 ID=cds-WP_032218182.1;Parent=gene-AD08_RS19575;Dbxref=Genbank:WP_032218182.1;Name=WP_032218182.1;gbkey=CDS;gene=htpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=AD08_RS19575;product=molecular chaperone HtpG;protein_id=WP_032218182.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 111324 111968 . + . ID=gene-AD08_RS19570;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=AD08_RS19570;old_locus_tag=AD08_0489 NZ_JHDJ01000113.1 Protein Homology CDS 111324 111968 . + 0 ID=cds-WP_001220233.1;Parent=gene-AD08_RS19570;Dbxref=Genbank:WP_001220233.1;Name=WP_001220233.1;gbkey=CDS;gene=adk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415007.1;locus_tag=AD08_RS19570;product=adenylate kinase;protein_id=WP_001220233.1;transl_table=11 NZ_JHDJ01000113.1 RefSeq gene 112207 113085 . + . ID=gene-AD08_RS19565;Name=hemH;end_range=113085,.;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=AD08_RS19565;old_locus_tag=AD08_0490;partial=true NZ_JHDJ01000113.1 Protein Homology CDS 112207 113085 . + 0 ID=cds-WP_032218184.1;Parent=gene-AD08_RS19565;Dbxref=Genbank:WP_032218184.1;Name=WP_032218184.1;end_range=113085,.;gbkey=CDS;gene=hemH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415008.1;locus_tag=AD08_RS19565;partial=true;product=ferrochelatase;protein_id=WP_032218184.1;transl_table=11 ##sequence-region NZ_JHDJ01000114.1 1 32348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000114.1 RefSeq region 1 32348 . + . ID=NZ_JHDJ01000114.1:1..32348;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000114.1 RefSeq gene 177 1139 . + . ID=gene-AD08_RS19560;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=AD08_RS19560;old_locus_tag=AD08_0491 NZ_JHDJ01000114.1 Protein Homology CDS 177 1139 . + 0 ID=cds-WP_032216006.1;Parent=gene-AD08_RS19560;Dbxref=Genbank:WP_032216006.1;Name=WP_032216006.1;gbkey=CDS;gene=hemH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415008.1;locus_tag=AD08_RS19560;product=ferrochelatase;protein_id=WP_032216006.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 1136 2095 . - . ID=gene-AD08_RS19555;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=AD08_RS19555;old_locus_tag=AD08_0492 NZ_JHDJ01000114.1 Protein Homology CDS 1136 2095 . - 0 ID=cds-WP_000801813.1;Parent=gene-AD08_RS19555;Dbxref=Genbank:WP_000801813.1;Name=WP_000801813.1;gbkey=CDS;gene=aes;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415009.1;locus_tag=AD08_RS19555;product=acetyl esterase;protein_id=WP_000801813.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 2247 3551 . + . ID=gene-AD08_RS19550;Name=AD08_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19550;old_locus_tag=AD08_0493 NZ_JHDJ01000114.1 Protein Homology CDS 2247 3551 . + 0 ID=cds-WP_000671574.1;Parent=gene-AD08_RS19550;Dbxref=Genbank:WP_000671574.1;Name=WP_000671574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965517.1;locus_tag=AD08_RS19550;product=inosine/guanosine kinase;protein_id=WP_000671574.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 3657 5360 . - . ID=gene-AD08_RS19545;Name=AD08_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19545;old_locus_tag=AD08_0494 NZ_JHDJ01000114.1 Protein Homology CDS 3657 5360 . - 0 ID=cds-WP_032173858.1;Parent=gene-AD08_RS19545;Dbxref=Genbank:WP_032173858.1;Name=WP_032173858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001674073.1;locus_tag=AD08_RS19545;product=Kef family K(+) transporter;protein_id=WP_032173858.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 5598 6818 . - . ID=gene-AD08_RS19540;Name=AD08_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19540;old_locus_tag=AD08_0495 NZ_JHDJ01000114.1 Protein Homology CDS 5598 6818 . - 0 ID=cds-WP_001606243.1;Parent=gene-AD08_RS19540;Dbxref=Genbank:WP_001606243.1;Name=WP_001606243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415012.1;locus_tag=AD08_RS19540;product=fosmidomycin MFS transporter;protein_id=WP_001606243.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 7036 8688 . + . ID=gene-AD08_RS19535;Name=AD08_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19535;old_locus_tag=AD08_0496 NZ_JHDJ01000114.1 Protein Homology CDS 7036 8688 . + 0 ID=cds-WP_032218192.1;Parent=gene-AD08_RS19535;Dbxref=Genbank:WP_032218192.1;Name=WP_032218192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415013.1;locus_tag=AD08_RS19535;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WP_032218192.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 8725 9204 . - . ID=gene-AD08_RS19530;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=AD08_RS19530;old_locus_tag=AD08_0497 NZ_JHDJ01000114.1 Protein Homology CDS 8725 9204 . - 0 ID=cds-WP_000186631.1;Parent=gene-AD08_RS19530;Dbxref=Genbank:WP_000186631.1;Name=WP_000186631.1;gbkey=CDS;gene=ybaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=AD08_RS19530;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186631.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 9408 10202 . - . ID=gene-AD08_RS19525;Name=AD08_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19525;old_locus_tag=AD08_0498 NZ_JHDJ01000114.1 Protein Homology CDS 9408 10202 . - 0 ID=cds-WP_000365173.1;Parent=gene-AD08_RS19525;Dbxref=Genbank:WP_000365173.1;Name=WP_000365173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415015.1;locus_tag=AD08_RS19525;product=TraB family protein;protein_id=WP_000365173.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 10340 10681 . + . ID=gene-AD08_RS19520;Name=AD08_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19520;old_locus_tag=AD08_0499 NZ_JHDJ01000114.1 Protein Homology CDS 10340 10681 . + 0 ID=cds-WP_000806442.1;Parent=gene-AD08_RS19520;Dbxref=Genbank:WP_000806442.1;Name=WP_000806442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415016.4;locus_tag=AD08_RS19520;product=HigA family addiction module antidote protein;protein_id=WP_000806442.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 10997 13501 . - . ID=gene-AD08_RS19515;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=AD08_RS19515;old_locus_tag=AD08_0500 NZ_JHDJ01000114.1 Protein Homology CDS 10997 13501 . - 0 ID=cds-WP_000083955.1;Parent=gene-AD08_RS19515;Dbxref=Genbank:WP_000083955.1;Name=WP_000083955.1;gbkey=CDS;gene=copA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415017.1;locus_tag=AD08_RS19515;product=copper-exporting P-type ATPase CopA;protein_id=WP_000083955.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 13763 14695 . + . ID=gene-AD08_RS19510;Name=glsA;gbkey=Gene;gene=glsA;gene_biotype=protein_coding;locus_tag=AD08_RS19510;old_locus_tag=AD08_0501 NZ_JHDJ01000114.1 Protein Homology CDS 13763 14695 . + 0 ID=cds-WP_000883034.1;Parent=gene-AD08_RS19510;Dbxref=Genbank:WP_000883034.1;Name=WP_000883034.1;gbkey=CDS;gene=glsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415018.1;locus_tag=AD08_RS19510;product=glutaminase A;protein_id=WP_000883034.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 14698 15990 . + . ID=gene-AD08_RS19505;Name=AD08_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19505;old_locus_tag=AD08_0502 NZ_JHDJ01000114.1 Protein Homology CDS 14698 15990 . + 0 ID=cds-WP_000982172.1;Parent=gene-AD08_RS19505;Dbxref=Genbank:WP_000982172.1;Name=WP_000982172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415019.1;locus_tag=AD08_RS19505;product=amino acid permease;protein_id=WP_000982172.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 16115 16522 . + . ID=gene-AD08_RS19500;Name=AD08_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19500;old_locus_tag=AD08_0503 NZ_JHDJ01000114.1 Protein Homology CDS 16115 16522 . + 0 ID=cds-WP_001026747.1;Parent=gene-AD08_RS19500;Dbxref=Genbank:WP_001026747.1;Name=WP_001026747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415020.1;locus_tag=AD08_RS19500;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026747.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 16523 16981 . - . ID=gene-AD08_RS19495;Name=AD08_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19495;old_locus_tag=AD08_0504 NZ_JHDJ01000114.1 Protein Homology CDS 16523 16981 . - 0 ID=cds-WP_001652832.1;Parent=gene-AD08_RS19495;Dbxref=Genbank:WP_001652832.1;Name=WP_001652832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415021.2;locus_tag=AD08_RS19495;product=NfeD family protein;protein_id=WP_001652832.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 16978 17895 . - . ID=gene-AD08_RS19490;Name=AD08_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19490;old_locus_tag=AD08_0505 NZ_JHDJ01000114.1 Protein Homology CDS 16978 17895 . - 0 ID=cds-WP_000904502.1;Parent=gene-AD08_RS19490;Dbxref=Genbank:WP_000904502.1;Name=WP_000904502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308579.1;locus_tag=AD08_RS19490;product=SPFH/Band 7/PHB domain protein;protein_id=WP_000904502.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 18041 18718 . + . ID=gene-AD08_RS19485;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;locus_tag=AD08_RS19485;old_locus_tag=AD08_0506 NZ_JHDJ01000114.1 Protein Homology CDS 18041 18718 . + 0 ID=cds-WP_001157540.1;Parent=gene-AD08_RS19485;Dbxref=Genbank:WP_001157540.1;Name=WP_001157540.1;gbkey=CDS;gene=fetA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415023.1;locus_tag=AD08_RS19485;product=iron ABC transporter ATP-binding protein FetA;protein_id=WP_001157540.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 18705 19484 . + . ID=gene-AD08_RS19480;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=AD08_RS19480;old_locus_tag=AD08_0507 NZ_JHDJ01000114.1 Protein Homology CDS 18705 19484 . + 0 ID=cds-WP_001295323.1;Parent=gene-AD08_RS19480;Dbxref=Genbank:WP_001295323.1;Name=WP_001295323.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308581.2;locus_tag=AD08_RS19480;product=iron export ABC transporter permease subunit FetB;protein_id=WP_001295323.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 19547 20401 . - . ID=gene-AD08_RS19475;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=AD08_RS19475;old_locus_tag=AD08_0508 NZ_JHDJ01000114.1 Protein Homology CDS 19547 20401 . - 0 ID=cds-WP_001300573.1;Parent=gene-AD08_RS19475;Dbxref=Genbank:WP_001300573.1;Name=WP_001300573.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415025.4;locus_tag=AD08_RS19475;product=chaperedoxin;protein_id=WP_001300573.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 20462 21271 . - . ID=gene-AD08_RS19470;Name=ybbO;gbkey=Gene;gene=ybbO;gene_biotype=protein_coding;locus_tag=AD08_RS19470;old_locus_tag=AD08_0509 NZ_JHDJ01000114.1 Protein Homology CDS 20462 21271 . - 0 ID=cds-WP_000148959.1;Parent=gene-AD08_RS19470;Dbxref=Genbank:WP_000148959.1;Name=WP_000148959.1;gbkey=CDS;gene=ybbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415026.1;locus_tag=AD08_RS19470;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000148959.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 21261 21884 . - . ID=gene-AD08_RS19465;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=AD08_RS19465;old_locus_tag=AD08_0510 NZ_JHDJ01000114.1 Protein Homology CDS 21261 21884 . - 0 ID=cds-WP_001295836.1;Parent=gene-AD08_RS19465;Dbxref=Genbank:WP_001295836.1;Name=WP_001295836.1;gbkey=CDS;gene=tesA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225520.1;locus_tag=AD08_RS19465;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001295836.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 21855 22541 . + . ID=gene-AD08_RS19460;Name=AD08_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19460;old_locus_tag=AD08_0511 NZ_JHDJ01000114.1 Protein Homology CDS 21855 22541 . + 0 ID=cds-WP_001110573.1;Parent=gene-AD08_RS19460;Dbxref=Genbank:WP_001110573.1;Name=WP_001110573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415028.1;locus_tag=AD08_RS19460;product=ABC transporter ATP-binding protein;protein_id=WP_001110573.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 22538 24952 . + . ID=gene-AD08_RS19455;Name=AD08_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19455;old_locus_tag=AD08_0512 NZ_JHDJ01000114.1 Protein Homology CDS 22538 24952 . + 0 ID=cds-WP_001415783.1;Parent=gene-AD08_RS19455;Dbxref=Genbank:WP_001415783.1;Name=WP_001415783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415029.1;locus_tag=AD08_RS19455;product=ABC transporter permease;protein_id=WP_001415783.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 25417 26733 . + . ID=gene-AD08_RS19450;Name=AD08_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19450;old_locus_tag=AD08_0513 NZ_JHDJ01000114.1 GeneMarkS-2+ CDS 25417 26733 . + 0 ID=cds-WP_162752715.1;Parent=gene-AD08_RS19450;Dbxref=Genbank:WP_162752715.1;Name=WP_162752715.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS19450;product=RHS repeat protein;protein_id=WP_162752715.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq pseudogene 26736 27703 . + . ID=gene-AD08_RS31595;Name=AD08_RS31595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31595;partial=true;pseudo=true;start_range=.,26736 NZ_JHDJ01000114.1 Protein Homology CDS 26736 27703 . + 0 ID=cds-AD08_RS31595;Parent=gene-AD08_RS31595;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009008328.1;locus_tag=AD08_RS31595;partial=true;product=RHS repeat protein;pseudo=true;start_range=.,26736;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 27807 29606 . + . ID=gene-AD08_RS0125045;Name=AD08_RS0125045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125045 NZ_JHDJ01000114.1 Protein Homology CDS 27807 29606 . + 0 ID=cds-WP_050436510.1;Parent=gene-AD08_RS0125045;Dbxref=Genbank:WP_050436510.1;Name=WP_050436510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308269.1;locus_tag=AD08_RS0125045;product=RHS repeat protein;protein_id=WP_050436510.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 29590 30072 . + . ID=gene-AD08_RS0125050;Name=AD08_RS0125050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125050 NZ_JHDJ01000114.1 Protein Homology CDS 29590 30072 . + 0 ID=cds-WP_032218199.1;Parent=gene-AD08_RS0125050;Dbxref=Genbank:WP_032218199.1;Name=WP_032218199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415974.1;locus_tag=AD08_RS0125050;product=hypothetical protein;protein_id=WP_032218199.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 29987 30172 . - . ID=gene-AD08_RS31600;Name=AD08_RS31600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31600 NZ_JHDJ01000114.1 Protein Homology CDS 29987 30172 . - 0 ID=cds-WP_162752697.1;Parent=gene-AD08_RS31600;Dbxref=Genbank:WP_162752697.1;Name=WP_162752697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518780.1;locus_tag=AD08_RS31600;product=hypothetical protein;protein_id=WP_162752697.1;transl_table=11 NZ_JHDJ01000114.1 RefSeq pseudogene 30254 31398 . + . ID=gene-AD08_RS19445;Name=AD08_RS19445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS19445;old_locus_tag=AD08_0516;pseudo=true NZ_JHDJ01000114.1 Protein Homology CDS 30254 31398 . + 0 ID=cds-AD08_RS19445;Parent=gene-AD08_RS19445;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027427.1;locus_tag=AD08_RS19445;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDJ01000114.1 RefSeq gene 31484 32348 . + . ID=gene-AD08_RS19440;Name=AD08_RS19440;end_range=32348,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19440;old_locus_tag=AD08_0518;partial=true NZ_JHDJ01000114.1 Protein Homology CDS 31484 32348 . + 0 ID=cds-WP_032218201.1;Parent=gene-AD08_RS19440;Dbxref=Genbank:WP_032218201.1;Name=WP_032218201.1;end_range=32348,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421020.1;locus_tag=AD08_RS19440;partial=true;product=ISAs1-like element ISEc5 family transposase;protein_id=WP_032218201.1;transl_table=11 ##sequence-region NZ_JHDJ01000115.1 1 31342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000115.1 RefSeq region 1 31342 . + . ID=NZ_JHDJ01000115.1:1..31342;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000115.1 RefSeq gene 56 424 . + . ID=gene-AD08_RS19435;Name=AD08_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19435;old_locus_tag=AD08_0519 NZ_JHDJ01000115.1 Protein Homology CDS 56 424 . + 0 ID=cds-WP_000877768.1-2;Parent=gene-AD08_RS19435;Dbxref=Genbank:WP_000877768.1;Name=WP_000877768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415031.1;locus_tag=AD08_RS19435;product=immunity protein;protein_id=WP_000877768.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq pseudogene 427 1134 . + . ID=gene-AD08_RS19430;Name=AD08_RS19430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS19430;old_locus_tag=AD08_0520;partial=true;pseudo=true;start_range=.,427 NZ_JHDJ01000115.1 Protein Homology CDS 427 1134 . + 0 ID=cds-AD08_RS19430;Parent=gene-AD08_RS19430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308587.2;locus_tag=AD08_RS19430;partial=true;product=RHS repeat protein;pseudo=true;start_range=.,427;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 1115 1375 . + . ID=gene-AD08_RS30295;Name=AD08_RS30295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30295 NZ_JHDJ01000115.1 Protein Homology CDS 1115 1375 . + 0 ID=cds-WP_001320180.1;Parent=gene-AD08_RS30295;Dbxref=Genbank:WP_001320180.1;Name=WP_001320180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308588.1;locus_tag=AD08_RS30295;product=hypothetical protein;protein_id=WP_001320180.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq pseudogene 2126 2491 . - . ID=gene-AD08_RS19425;Name=AD08_RS19425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS19425;old_locus_tag=AD08_0521;partial=true;pseudo=true;start_range=.,2126 NZ_JHDJ01000115.1 Protein Homology CDS 2126 2491 . - 0 ID=cds-AD08_RS19425;Parent=gene-AD08_RS19425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=AD08_RS19425;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,2126;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 2607 3701 . - . ID=gene-AD08_RS19420;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=AD08_RS19420;old_locus_tag=AD08_0522 NZ_JHDJ01000115.1 Protein Homology CDS 2607 3701 . - 0 ID=cds-WP_001157938.1;Parent=gene-AD08_RS19420;Dbxref=Genbank:WP_001157938.1;Name=WP_001157938.1;gbkey=CDS;gene=mnmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415036.1;locus_tag=AD08_RS19420;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_001157938.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 3770 4696 . - . ID=gene-AD08_RS19415;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=AD08_RS19415;old_locus_tag=AD08_0523 NZ_JHDJ01000115.1 Protein Homology CDS 3770 4696 . - 0 ID=cds-WP_000460145.1;Parent=gene-AD08_RS19415;Dbxref=Genbank:WP_000460145.1;Name=WP_000460145.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308592.1;locus_tag=AD08_RS19415;product=HTH-type transcriptional activator AllS;protein_id=WP_000460145.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 4926 5408 . + . ID=gene-AD08_RS19410;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=AD08_RS19410;old_locus_tag=AD08_0524 NZ_JHDJ01000115.1 Protein Homology CDS 4926 5408 . + 0 ID=cds-WP_000776388.1;Parent=gene-AD08_RS19410;Dbxref=Genbank:WP_000776388.1;Name=WP_000776388.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308593.1;locus_tag=AD08_RS19410;product=ureidoglycolate lyase;protein_id=WP_000776388.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 5486 6301 . + . ID=gene-AD08_RS19405;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=AD08_RS19405;old_locus_tag=AD08_0525 NZ_JHDJ01000115.1 Protein Homology CDS 5486 6301 . + 0 ID=cds-WP_032218207.1;Parent=gene-AD08_RS19405;Dbxref=Genbank:WP_032218207.1;Name=WP_032218207.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308594.1;locus_tag=AD08_RS19405;product=HTH-type transcriptional repressor AllR;protein_id=WP_032218207.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 6391 8172 . + . ID=gene-AD08_RS19400;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=AD08_RS19400;old_locus_tag=AD08_0526 NZ_JHDJ01000115.1 Protein Homology CDS 6391 8172 . + 0 ID=cds-WP_001096881.1;Parent=gene-AD08_RS19400;Dbxref=Genbank:WP_001096881.1;Name=WP_001096881.1;gbkey=CDS;gene=gcl;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308595.1;locus_tag=AD08_RS19400;product=glyoxylate carboligase;protein_id=WP_001096881.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 8185 8961 . + . ID=gene-AD08_RS19395;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=AD08_RS19395;old_locus_tag=AD08_0527 NZ_JHDJ01000115.1 Protein Homology CDS 8185 8961 . + 0 ID=cds-WP_032218208.1;Parent=gene-AD08_RS19395;Dbxref=Genbank:WP_032218208.1;Name=WP_032218208.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415041.1;locus_tag=AD08_RS19395;product=hydroxypyruvate isomerase;protein_id=WP_032218208.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 9061 9939 . + . ID=gene-AD08_RS19390;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=AD08_RS19390;old_locus_tag=AD08_0528 NZ_JHDJ01000115.1 Protein Homology CDS 9061 9939 . + 0 ID=cds-WP_000765839.1;Parent=gene-AD08_RS19390;Dbxref=Genbank:WP_000765839.1;Name=WP_000765839.1;gbkey=CDS;gene=glxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415042.1;locus_tag=AD08_RS19390;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765839.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 10108 11562 . + . ID=gene-AD08_RS19385;Name=AD08_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19385;old_locus_tag=AD08_0529 NZ_JHDJ01000115.1 Protein Homology CDS 10108 11562 . + 0 ID=cds-WP_000401100.1;Parent=gene-AD08_RS19385;Dbxref=Genbank:WP_000401100.1;Name=WP_000401100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=AD08_RS19385;product=putative allantoin permease;protein_id=WP_000401100.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 11622 12983 . + . ID=gene-AD08_RS19380;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=AD08_RS19380;old_locus_tag=AD08_0530 NZ_JHDJ01000115.1 Protein Homology CDS 11622 12983 . + 0 ID=cds-WP_000006900.1;Parent=gene-AD08_RS19380;Dbxref=Genbank:WP_000006900.1;Name=WP_000006900.1;gbkey=CDS;gene=allB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415045.1;locus_tag=AD08_RS19380;product=allantoinase AllB;protein_id=WP_000006900.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 13040 14341 . + . ID=gene-AD08_RS19375;Name=AD08_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19375;old_locus_tag=AD08_0531 NZ_JHDJ01000115.1 Protein Homology CDS 13040 14341 . + 0 ID=cds-WP_001302767.1;Parent=gene-AD08_RS19375;Dbxref=Genbank:WP_001302767.1;Name=WP_001302767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308602.2;locus_tag=AD08_RS19375;product=uracil/xanthine transporter;protein_id=WP_001302767.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 14363 15508 . + . ID=gene-AD08_RS19370;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=AD08_RS19370;old_locus_tag=AD08_0532 NZ_JHDJ01000115.1 Protein Homology CDS 14363 15508 . + 0 ID=cds-WP_001333621.1;Parent=gene-AD08_RS19370;Dbxref=Genbank:WP_001333621.1;Name=WP_001333621.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415047.1;locus_tag=AD08_RS19370;product=glycerate 3-kinase;protein_id=WP_001333621.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 15736 16521 . - . ID=gene-AD08_RS19365;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=AD08_RS19365;old_locus_tag=AD08_0533 NZ_JHDJ01000115.1 Protein Homology CDS 15736 16521 . - 0 ID=cds-WP_000540997.1;Parent=gene-AD08_RS19365;Dbxref=Genbank:WP_000540997.1;Name=WP_000540997.1;gbkey=CDS;gene=allE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415048.1;locus_tag=AD08_RS19365;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540997.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 16532 17767 . - . ID=gene-AD08_RS19360;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=AD08_RS19360;old_locus_tag=AD08_0534 NZ_JHDJ01000115.1 Protein Homology CDS 16532 17767 . - 0 ID=cds-WP_032218209.1;Parent=gene-AD08_RS19360;Dbxref=Genbank:WP_032218209.1;Name=WP_032218209.1;gbkey=CDS;gene=allC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415049.1;locus_tag=AD08_RS19360;product=allantoate deiminase;protein_id=WP_032218209.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq pseudogene 17789 18837 . - . ID=gene-AD08_RS19355;Name=allD;gbkey=Gene;gene=allD;gene_biotype=pseudogene;locus_tag=AD08_RS19355;old_locus_tag=AD08_0535;pseudo=true NZ_JHDJ01000115.1 Protein Homology CDS 17789 18837 . - 0 ID=cds-AD08_RS19355;Parent=gene-AD08_RS19355;Note=frameshifted;gbkey=CDS;gene=allD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415050.1;locus_tag=AD08_RS19355;product=ureidoglycolate dehydrogenase;pseudo=true;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 19154 20806 . + . ID=gene-AD08_RS19350;Name=AD08_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19350;old_locus_tag=AD08_0536 NZ_JHDJ01000115.1 Protein Homology CDS 19154 20806 . + 0 ID=cds-WP_032218210.1;Parent=gene-AD08_RS19350;Dbxref=Genbank:WP_032218210.1;Name=WP_032218210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001467196.1;locus_tag=AD08_RS19350;product=acyl-CoA synthetase FdrA;protein_id=WP_032218210.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 20830 22089 . + . ID=gene-AD08_RS19345;Name=AD08_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19345;old_locus_tag=AD08_0537 NZ_JHDJ01000115.1 Protein Homology CDS 20830 22089 . + 0 ID=cds-WP_000495401.1;Parent=gene-AD08_RS19345;Dbxref=Genbank:WP_000495401.1;Name=WP_000495401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009029994.1;locus_tag=AD08_RS19345;product=DUF1116 domain-containing protein;protein_id=WP_000495401.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 22100 22915 . + . ID=gene-AD08_RS19340;Name=AD08_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19340;old_locus_tag=AD08_0538 NZ_JHDJ01000115.1 Protein Homology CDS 22100 22915 . + 0 ID=cds-WP_000152517.1;Parent=gene-AD08_RS19340;Dbxref=Genbank:WP_000152517.1;Name=WP_000152517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308609.1;locus_tag=AD08_RS19340;product=DUF2877 domain-containing protein;protein_id=WP_000152517.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 22912 23805 . + . ID=gene-AD08_RS19335;Name=AD08_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19335;old_locus_tag=AD08_0539 NZ_JHDJ01000115.1 Protein Homology CDS 22912 23805 . + 0 ID=cds-WP_000855388.1;Parent=gene-AD08_RS19335;Dbxref=Genbank:WP_000855388.1;Name=WP_000855388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706399.1;locus_tag=AD08_RS19335;product=carbamate kinase;protein_id=WP_000855388.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 24000 25067 . - . ID=gene-AD08_RS19330;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=AD08_RS19330;old_locus_tag=AD08_0540 NZ_JHDJ01000115.1 Protein Homology CDS 24000 25067 . - 0 ID=cds-WP_000815524.1;Parent=gene-AD08_RS19330;Dbxref=Genbank:WP_000815524.1;Name=WP_000815524.1;gbkey=CDS;gene=purK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415055.1;locus_tag=AD08_RS19330;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815524.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 25064 25573 . - . ID=gene-AD08_RS19325;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AD08_RS19325;old_locus_tag=AD08_0541 NZ_JHDJ01000115.1 Protein Homology CDS 25064 25573 . - 0 ID=cds-WP_001295318.1;Parent=gene-AD08_RS19325;Dbxref=Genbank:WP_001295318.1;Name=WP_001295318.1;gbkey=CDS;gene=purE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308612.1;locus_tag=AD08_RS19325;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_001295318.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 25691 26413 . - . ID=gene-AD08_RS19320;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=AD08_RS19320;old_locus_tag=AD08_0542 NZ_JHDJ01000115.1 Protein Homology CDS 25691 26413 . - 0 ID=cds-WP_000212253.1;Parent=gene-AD08_RS19320;Dbxref=Genbank:WP_000212253.1;Name=WP_000212253.1;gbkey=CDS;gene=lpxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415057.1;locus_tag=AD08_RS19320;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212253.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 26416 26910 . - . ID=gene-AD08_RS19315;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=AD08_RS19315;old_locus_tag=AD08_0543 NZ_JHDJ01000115.1 Protein Homology CDS 26416 26910 . - 0 ID=cds-WP_000256002.1;Parent=gene-AD08_RS19315;Dbxref=Genbank:WP_000256002.1;Name=WP_000256002.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=AD08_RS19315;product=peptidylprolyl isomerase B;protein_id=WP_000256002.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 27084 28469 . + . ID=gene-AD08_RS19310;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AD08_RS19310;old_locus_tag=AD08_0544 NZ_JHDJ01000115.1 Protein Homology CDS 27084 28469 . + 0 ID=cds-WP_000912347.1;Parent=gene-AD08_RS19310;Dbxref=Genbank:WP_000912347.1;Name=WP_000912347.1;gbkey=CDS;gene=cysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=AD08_RS19310;product=cysteine--tRNA ligase;protein_id=WP_000912347.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 28505 29026 . - . ID=gene-AD08_RS19305;Name=AD08_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19305;old_locus_tag=AD08_0545 NZ_JHDJ01000115.1 Protein Homology CDS 28505 29026 . - 0 ID=cds-WP_001143535.1;Parent=gene-AD08_RS19305;Dbxref=Genbank:WP_001143535.1;Name=WP_001143535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415060.1;locus_tag=AD08_RS19305;product=metal-dependent hydrolase;protein_id=WP_001143535.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 29134 29346 . - . ID=gene-AD08_RS19300;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=AD08_RS19300;old_locus_tag=AD08_0546 NZ_JHDJ01000115.1 Protein Homology CDS 29134 29346 . - 0 ID=cds-WP_000190288.1;Parent=gene-AD08_RS19300;Dbxref=Genbank:WP_000190288.1;Name=WP_000190288.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308617.2;locus_tag=AD08_RS19300;product=ribosome-associated protein YbcJ;protein_id=WP_000190288.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq gene 29348 30214 . - . ID=gene-AD08_RS19295;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=AD08_RS19295;old_locus_tag=AD08_0547 NZ_JHDJ01000115.1 Protein Homology CDS 29348 30214 . - 0 ID=cds-WP_000729155.1;Parent=gene-AD08_RS19295;Dbxref=Genbank:WP_000729155.1;Name=WP_000729155.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308618.1;locus_tag=AD08_RS19295;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729155.1;transl_table=11 NZ_JHDJ01000115.1 RefSeq pseudogene 30694 30927 . + . ID=gene-AD08_RS19290;Name=AD08_RS19290;end_range=30927,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS19290;old_locus_tag=AD08_0548;partial=true;pseudo=true NZ_JHDJ01000115.1 Protein Homology CDS 30694 30927 . + 0 ID=cds-AD08_RS19290;Parent=gene-AD08_RS19290;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=30927,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308619.2;locus_tag=AD08_RS19290;partial=true;product=type 1 fimbrial protein subunit FimA;pseudo=true;transl_table=11 NZ_JHDJ01000115.1 RefSeq pseudogene 30979 31342 . + . ID=gene-AD08_RS0125060;Name=AD08_RS0125060;end_range=31342,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125060;partial=true;pseudo=true NZ_JHDJ01000115.1 Protein Homology CDS 30979 31342 . + 0 ID=cds-AD08_RS0125060;Parent=gene-AD08_RS0125060;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=31342,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS0125060;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000116.1 1 29498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000116.1 RefSeq region 1 29498 . + . ID=NZ_JHDJ01000116.1:1..29498;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000116.1 RefSeq pseudogene 1 391 . + . ID=gene-AD08_RS19285;Name=AD08_RS19285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS19285;old_locus_tag=AD08_0550;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000116.1 Protein Homology CDS 1 391 . + 1 ID=cds-AD08_RS19285;Parent=gene-AD08_RS19285;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS19285;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 545 1237 . + . ID=gene-AD08_RS19280;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=AD08_RS19280;old_locus_tag=AD08_0551 NZ_JHDJ01000116.1 Protein Homology CDS 545 1237 . + 0 ID=cds-WP_000988364.1;Parent=gene-AD08_RS19280;Dbxref=Genbank:WP_000988364.1;Name=WP_000988364.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415064.1;locus_tag=AD08_RS19280;product=type 1 fimbria chaperone FimC;protein_id=WP_000988364.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 1268 3877 . + . ID=gene-AD08_RS19275;Name=AD08_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19275;old_locus_tag=AD08_0552 NZ_JHDJ01000116.1 Protein Homology CDS 1268 3877 . + 0 ID=cds-WP_001310622.1;Parent=gene-AD08_RS19275;Dbxref=Genbank:WP_001310622.1;Name=WP_001310622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308621.1;locus_tag=AD08_RS19275;product=fimbrial biogenesis usher protein;protein_id=WP_001310622.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 3890 4897 . + . ID=gene-AD08_RS19270;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=AD08_RS19270;old_locus_tag=AD08_0554 NZ_JHDJ01000116.1 Protein Homology CDS 3890 4897 . + 0 ID=cds-WP_000691044.1;Parent=gene-AD08_RS19270;Dbxref=Genbank:WP_000691044.1;Name=WP_000691044.1;gbkey=CDS;gene=fimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308622.2;locus_tag=AD08_RS19270;product=type 1 fimbrin D-mannose specific adhesin FimH;protein_id=WP_000691044.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 4908 5423 . + . ID=gene-AD08_RS0125065;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=AD08_RS0125065 NZ_JHDJ01000116.1 Protein Homology CDS 4908 5423 . + 0 ID=cds-WP_001255230.1;Parent=gene-AD08_RS0125065;Dbxref=Genbank:WP_001255230.1;Name=WP_001255230.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415067.1;locus_tag=AD08_RS0125065;product=fimbria assembly protein;protein_id=WP_001255230.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 5426 6058 . - . ID=gene-AD08_RS19265;Name=AD08_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19265;old_locus_tag=AD08_0556 NZ_JHDJ01000116.1 Protein Homology CDS 5426 6058 . - 0 ID=cds-WP_000805428.1;Parent=gene-AD08_RS19265;Dbxref=Genbank:WP_000805428.1;Name=WP_000805428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308624.1;locus_tag=AD08_RS19265;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000805428.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 6301 6377 . + . ID=gene-AD08_RS19260;Name=AD08_RS19260;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS19260;old_locus_tag=AD08_0558 NZ_JHDJ01000116.1 tRNAscan-SE tRNA 6301 6377 . + . ID=rna-AD08_RS19260;Parent=gene-AD08_RS19260;anticodon=(pos:6335..6337);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS19260;product=tRNA-Arg NZ_JHDJ01000116.1 tRNAscan-SE exon 6301 6377 . + . ID=exon-AD08_RS19260-1;Parent=rna-AD08_RS19260;anticodon=(pos:6335..6337);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS19260;product=tRNA-Arg NZ_JHDJ01000116.1 RefSeq gene 6423 7184 . - . ID=gene-AD08_RS19255;Name=AD08_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19255;old_locus_tag=AD08_0559 NZ_JHDJ01000116.1 Protein Homology CDS 6423 7184 . - 0 ID=cds-WP_001177471.1;Parent=gene-AD08_RS19255;Dbxref=Genbank:WP_001177471.1;Name=WP_001177471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415098.1;locus_tag=AD08_RS19255;product=DNA-binding transcriptional regulator EnvY;protein_id=WP_001177471.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 7367 8257 . - . ID=gene-AD08_RS19250;Name=AD08_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19250;old_locus_tag=AD08_0560 NZ_JHDJ01000116.1 Protein Homology CDS 7367 8257 . - 0 ID=cds-WP_001224604.1;Parent=gene-AD08_RS19250;Dbxref=Genbank:WP_001224604.1;Name=WP_001224604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415099.1;locus_tag=AD08_RS19250;product=DUF4434 family protein;protein_id=WP_001224604.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 8258 11230 . - . ID=gene-AD08_RS19245;Name=nfrA;gbkey=Gene;gene=nfrA;gene_biotype=protein_coding;locus_tag=AD08_RS19245;old_locus_tag=AD08_0561 NZ_JHDJ01000116.1 Protein Homology CDS 8258 11230 . - 0 ID=cds-WP_032218215.1;Parent=gene-AD08_RS19245;Dbxref=Genbank:WP_032218215.1;Name=WP_032218215.1;gbkey=CDS;gene=nfrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415100.1;locus_tag=AD08_RS19245;product=bacteriophage adsorption protein NfrA;protein_id=WP_032218215.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 11217 13454 . - . ID=gene-AD08_RS19240;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=AD08_RS19240;old_locus_tag=AD08_0562 NZ_JHDJ01000116.1 Protein Homology CDS 11217 13454 . - 0 ID=cds-WP_000383932.1;Parent=gene-AD08_RS19240;Dbxref=Genbank:WP_000383932.1;Name=WP_000383932.1;gbkey=CDS;gene=nrfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308628.1;locus_tag=AD08_RS19240;product=phage adsorption protein NrfB;protein_id=WP_000383932.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 13604 15046 . - . ID=gene-AD08_RS19235;Name=cusS;gbkey=Gene;gene=cusS;gene_biotype=protein_coding;locus_tag=AD08_RS19235;old_locus_tag=AD08_0563 NZ_JHDJ01000116.1 Protein Homology CDS 13604 15046 . - 0 ID=cds-WP_000253842.1;Parent=gene-AD08_RS19235;Dbxref=Genbank:WP_000253842.1;Name=WP_000253842.1;gbkey=CDS;gene=cusS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415102.1;locus_tag=AD08_RS19235;product=Cu(+)/Ag(+) sensor histidine kinase CusS;protein_id=WP_000253842.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 15036 15719 . - . ID=gene-AD08_RS19230;Name=cusR;gbkey=Gene;gene=cusR;gene_biotype=protein_coding;locus_tag=AD08_RS19230;old_locus_tag=AD08_0564 NZ_JHDJ01000116.1 Protein Homology CDS 15036 15719 . - 0 ID=cds-WP_000770953.1;Parent=gene-AD08_RS19230;Dbxref=Genbank:WP_000770953.1;Name=WP_000770953.1;gbkey=CDS;gene=cusR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308636.1;locus_tag=AD08_RS19230;product=copper response regulator transcription factor CusR;protein_id=WP_000770953.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 15876 17255 . + . ID=gene-AD08_RS19225;Name=cusC;gbkey=Gene;gene=cusC;gene_biotype=protein_coding;locus_tag=AD08_RS19225;old_locus_tag=AD08_0565 NZ_JHDJ01000116.1 Protein Homology CDS 15876 17255 . + 0 ID=cds-WP_000074244.1;Parent=gene-AD08_RS19225;Dbxref=Genbank:WP_000074244.1;Name=WP_000074244.1;gbkey=CDS;gene=cusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308637.1;locus_tag=AD08_RS19225;product=Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC;protein_id=WP_000074244.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 17282 17614 . + . ID=gene-AD08_RS19220;Name=cusF;gbkey=Gene;gene=cusF;gene_biotype=protein_coding;locus_tag=AD08_RS19220;old_locus_tag=AD08_0566 NZ_JHDJ01000116.1 Protein Homology CDS 17282 17614 . + 0 ID=cds-WP_000709880.1;Parent=gene-AD08_RS19220;Dbxref=Genbank:WP_000709880.1;Name=WP_000709880.1;gbkey=CDS;gene=cusF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706420.1;locus_tag=AD08_RS19220;product=Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF;protein_id=WP_000709880.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 17630 18853 . + . ID=gene-AD08_RS19215;Name=cusB;gbkey=Gene;gene=cusB;gene_biotype=protein_coding;locus_tag=AD08_RS19215;old_locus_tag=AD08_0567 NZ_JHDJ01000116.1 Protein Homology CDS 17630 18853 . + 0 ID=cds-WP_032218217.1;Parent=gene-AD08_RS19215;Dbxref=Genbank:WP_032218217.1;Name=WP_032218217.1;gbkey=CDS;gene=cusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308639.1;locus_tag=AD08_RS19215;product=Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB;protein_id=WP_032218217.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 18865 22008 . + . ID=gene-AD08_RS19210;Name=cusA;gbkey=Gene;gene=cusA;gene_biotype=protein_coding;locus_tag=AD08_RS19210;old_locus_tag=AD08_0568 NZ_JHDJ01000116.1 Protein Homology CDS 18865 22008 . + 0 ID=cds-WP_001412773.1;Parent=gene-AD08_RS19210;Dbxref=Genbank:WP_001412773.1;Name=WP_001412773.1;gbkey=CDS;gene=cusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415107.1;locus_tag=AD08_RS19210;product=Cu(+)/Ag(+) efflux RND transporter permease subunit CusA;protein_id=WP_001412773.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 22110 23486 . + . ID=gene-AD08_RS19205;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=AD08_RS19205;old_locus_tag=AD08_0569 NZ_JHDJ01000116.1 Protein Homology CDS 22110 23486 . + 0 ID=cds-WP_001736957.1;Parent=gene-AD08_RS19205;Dbxref=Genbank:WP_001736957.1;Name=WP_001736957.1;gbkey=CDS;gene=pheP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415108.1;locus_tag=AD08_RS19205;product=phenylalanine transporter;protein_id=WP_001736957.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 23567 24814 . - . ID=gene-AD08_RS19200;Name=AD08_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19200;old_locus_tag=AD08_0570 NZ_JHDJ01000116.1 Protein Homology CDS 23567 24814 . - 0 ID=cds-WP_001153148.1;Parent=gene-AD08_RS19200;Dbxref=Genbank:WP_001153148.1;Name=WP_001153148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415109.1;locus_tag=AD08_RS19200;product=mechanosensitive ion channel YbdG;protein_id=WP_001153148.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 24922 25575 . - . ID=gene-AD08_RS19195;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=AD08_RS19195;old_locus_tag=AD08_0571 NZ_JHDJ01000116.1 Protein Homology CDS 24922 25575 . - 0 ID=cds-WP_000351487.1;Parent=gene-AD08_RS19195;Dbxref=Genbank:WP_000351487.1;Name=WP_000351487.1;gbkey=CDS;gene=nfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415110.1;locus_tag=AD08_RS19195;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000351487.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 25669 26037 . - . ID=gene-AD08_RS19190;Name=AD08_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19190;old_locus_tag=AD08_0573 NZ_JHDJ01000116.1 Protein Homology CDS 25669 26037 . - 0 ID=cds-WP_000360951.1;Parent=gene-AD08_RS19190;Dbxref=Genbank:WP_000360951.1;Name=WP_000360951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308644.1;locus_tag=AD08_RS19190;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000360951.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 26102 26350 . - . ID=gene-AD08_RS19185;Name=AD08_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19185;old_locus_tag=AD08_0574 NZ_JHDJ01000116.1 Protein Homology CDS 26102 26350 . - 0 ID=cds-WP_000682509.1;Parent=gene-AD08_RS19185;Dbxref=Genbank:WP_000682509.1;Name=WP_000682509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415112.1;locus_tag=AD08_RS19185;product=DUF1158 domain-containing protein;protein_id=WP_000682509.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 26416 27534 . - . ID=gene-AD08_RS19180;Name=AD08_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19180;old_locus_tag=AD08_0575 NZ_JHDJ01000116.1 Protein Homology CDS 26416 27534 . - 0 ID=cds-WP_001130654.1;Parent=gene-AD08_RS19180;Dbxref=Genbank:WP_001130654.1;Name=WP_001130654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415113.1;locus_tag=AD08_RS19180;product=glutamate--cysteine ligase;protein_id=WP_001130654.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 27987 28139 . + . ID=gene-AD08_RS19175;Name=AD08_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19175;old_locus_tag=AD08_0576 NZ_JHDJ01000116.1 Protein Homology CDS 27987 28139 . + 0 ID=cds-WP_000956455.1;Parent=gene-AD08_RS19175;Dbxref=Genbank:WP_000956455.1;Name=WP_000956455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025295.1;locus_tag=AD08_RS19175;product=type I toxin-antitoxin system toxin HokE;protein_id=WP_000956455.1;transl_table=11 NZ_JHDJ01000116.1 RefSeq gene 28216 29328 . + . ID=gene-AD08_RS19170;Name=AD08_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19170;old_locus_tag=AD08_0577 NZ_JHDJ01000116.1 Protein Homology CDS 28216 29328 . + 0 ID=cds-WP_001300563.1-5;Parent=gene-AD08_RS19170;Dbxref=Genbank:WP_001300563.1;Name=WP_001300563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS19170;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 ##sequence-region NZ_JHDJ01000117.1 1 48976 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000117.1 RefSeq region 1 48976 . + . ID=NZ_JHDJ01000117.1:1..48976;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000117.1 RefSeq gene 1 1068 . + . ID=gene-AD08_RS19165;Name=AD08_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19165;old_locus_tag=AD08_0578;partial=true;start_range=.,1 NZ_JHDJ01000117.1 Protein Homology CDS 1 1068 . + 0 ID=cds-WP_032217610.1-3;Parent=gene-AD08_RS19165;Dbxref=Genbank:WP_032217610.1;Name=WP_032217610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS19165;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032217610.1;start_range=.,1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 1349 1969 . - . ID=gene-AD08_RS19160;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=AD08_RS19160;old_locus_tag=AD08_0579 NZ_JHDJ01000117.1 Protein Homology CDS 1349 1969 . - 0 ID=cds-WP_001749708.1;Parent=gene-AD08_RS19160;Dbxref=Genbank:WP_001749708.1;Name=WP_001749708.1;gbkey=CDS;gene=entD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415115.2;locus_tag=AD08_RS19160;product=enterobactin synthase subunit EntD;protein_id=WP_001749708.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 2144 4384 . - . ID=gene-AD08_RS19155;Name=fepA;gbkey=Gene;gene=fepA;gene_biotype=protein_coding;locus_tag=AD08_RS19155;old_locus_tag=AD08_0580 NZ_JHDJ01000117.1 Protein Homology CDS 2144 4384 . - 0 ID=cds-WP_032218221.1;Parent=gene-AD08_RS19155;Dbxref=Genbank:WP_032218221.1;Name=WP_032218221.1;gbkey=CDS;gene=fepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415116.1;locus_tag=AD08_RS19155;product=siderophore enterobactin receptor FepA;protein_id=WP_032218221.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 4627 5829 . + . ID=gene-AD08_RS19150;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=AD08_RS19150;old_locus_tag=AD08_0582 NZ_JHDJ01000117.1 Protein Homology CDS 4627 5829 . + 0 ID=cds-WP_001635900.1;Parent=gene-AD08_RS19150;Dbxref=Genbank:WP_001635900.1;Name=WP_001635900.1;gbkey=CDS;gene=fes;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415117.2;locus_tag=AD08_RS19150;product=enterochelin esterase;protein_id=WP_001635900.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 5832 6050 . + . ID=gene-AD08_RS19145;Name=AD08_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19145;old_locus_tag=AD08_0583 NZ_JHDJ01000117.1 Protein Homology CDS 5832 6050 . + 0 ID=cds-WP_000885798.1;Parent=gene-AD08_RS19145;Dbxref=Genbank:WP_000885798.1;Name=WP_000885798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588441.1;locus_tag=AD08_RS19145;product=enterobactin biosynthesis protein YbdZ;protein_id=WP_000885798.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 6047 9928 . + . ID=gene-AD08_RS19140;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=AD08_RS19140;old_locus_tag=AD08_0584 NZ_JHDJ01000117.1 Protein Homology CDS 6047 9928 . + 0 ID=cds-WP_000077805.1;Parent=gene-AD08_RS19140;Dbxref=Genbank:WP_000077805.1;Name=WP_000077805.1;gbkey=CDS;gene=entF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415118.1;locus_tag=AD08_RS19140;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_000077805.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 10144 11277 . + . ID=gene-AD08_RS19135;Name=fepE;gbkey=Gene;gene=fepE;gene_biotype=protein_coding;locus_tag=AD08_RS19135;old_locus_tag=AD08_0586 NZ_JHDJ01000117.1 Protein Homology CDS 10144 11277 . + 0 ID=cds-WP_032218223.1;Parent=gene-AD08_RS19135;Dbxref=Genbank:WP_032218223.1;Name=WP_032218223.1;gbkey=CDS;gene=fepE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415119.1;locus_tag=AD08_RS19135;product=LPS O-antigen length regulator;protein_id=WP_032218223.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 11274 12089 . - . ID=gene-AD08_RS19130;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=AD08_RS19130;old_locus_tag=AD08_0587 NZ_JHDJ01000117.1 Protein Homology CDS 11274 12089 . - 0 ID=cds-WP_000140647.1;Parent=gene-AD08_RS19130;Dbxref=Genbank:WP_000140647.1;Name=WP_000140647.1;gbkey=CDS;gene=fepC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415120.1;locus_tag=AD08_RS19130;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140647.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 12086 13078 . - . ID=gene-AD08_RS19125;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=AD08_RS19125;old_locus_tag=AD08_0588 NZ_JHDJ01000117.1 Protein Homology CDS 12086 13078 . - 0 ID=cds-WP_000640988.1;Parent=gene-AD08_RS19125;Dbxref=Genbank:WP_000640988.1;Name=WP_000640988.1;gbkey=CDS;gene=fepG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415121.1;locus_tag=AD08_RS19125;product=iron-enterobactin ABC transporter permease;protein_id=WP_000640988.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 13075 14079 . - . ID=gene-AD08_RS19120;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=AD08_RS19120;old_locus_tag=AD08_0589 NZ_JHDJ01000117.1 Protein Homology CDS 13075 14079 . - 0 ID=cds-WP_000016947.1;Parent=gene-AD08_RS19120;Dbxref=Genbank:WP_000016947.1;Name=WP_000016947.1;gbkey=CDS;gene=fepD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415122.1;locus_tag=AD08_RS19120;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_000016947.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 14190 15440 . + . ID=gene-AD08_RS19115;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=AD08_RS19115;old_locus_tag=AD08_0590 NZ_JHDJ01000117.1 Protein Homology CDS 14190 15440 . + 0 ID=cds-WP_001041786.1;Parent=gene-AD08_RS19115;Dbxref=Genbank:WP_001041786.1;Name=WP_001041786.1;gbkey=CDS;gene=entS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415123.1;locus_tag=AD08_RS19115;product=enterobactin transporter EntS;protein_id=WP_001041786.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 15444 16400 . - . ID=gene-AD08_RS19110;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=AD08_RS19110;old_locus_tag=AD08_0591 NZ_JHDJ01000117.1 Protein Homology CDS 15444 16400 . - 0 ID=cds-WP_001234311.1;Parent=gene-AD08_RS19110;Dbxref=Genbank:WP_001234311.1;Name=WP_001234311.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415124.1;locus_tag=AD08_RS19110;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001234311.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 16783 17958 . + . ID=gene-AD08_RS19105;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=AD08_RS19105;old_locus_tag=AD08_0592 NZ_JHDJ01000117.1 Protein Homology CDS 16783 17958 . + 0 ID=cds-WP_000381303.1;Parent=gene-AD08_RS19105;Dbxref=Genbank:WP_000381303.1;Name=WP_000381303.1;gbkey=CDS;gene=entC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308659.1;locus_tag=AD08_RS19105;product=isochorismate synthase EntC;protein_id=WP_000381303.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 17968 19578 . + . ID=gene-AD08_RS19100;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=AD08_RS19100;old_locus_tag=AD08_0593 NZ_JHDJ01000117.1 Protein Homology CDS 17968 19578 . + 0 ID=cds-WP_000026812.1;Parent=gene-AD08_RS19100;Dbxref=Genbank:WP_000026812.1;Name=WP_000026812.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415126.1;locus_tag=AD08_RS19100;product=(2%2C3-dihydroxybenzoyl)adenylate synthase;protein_id=WP_000026812.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 19592 20449 . + . ID=gene-AD08_RS19095;Name=entB;gbkey=Gene;gene=entB;gene_biotype=protein_coding;locus_tag=AD08_RS19095;old_locus_tag=AD08_0594 NZ_JHDJ01000117.1 Protein Homology CDS 19592 20449 . + 0 ID=cds-WP_001007138.1;Parent=gene-AD08_RS19095;Dbxref=Genbank:WP_001007138.1;Name=WP_001007138.1;gbkey=CDS;gene=entB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308661.1;locus_tag=AD08_RS19095;product=enterobactin biosynthesis bifunctional isochorismatase/aryl carrier protein EntB;protein_id=WP_001007138.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 20449 21195 . + . ID=gene-AD08_RS19090;Name=dhbA;gbkey=Gene;gene=dhbA;gene_biotype=protein_coding;locus_tag=AD08_RS19090;old_locus_tag=AD08_0595 NZ_JHDJ01000117.1 Protein Homology CDS 20449 21195 . + 0 ID=cds-WP_000347651.1;Parent=gene-AD08_RS19090;Dbxref=Genbank:WP_000347651.1;Name=WP_000347651.1;gbkey=CDS;gene=dhbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415128.1;locus_tag=AD08_RS19090;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase;protein_id=WP_000347651.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 21198 21611 . + . ID=gene-AD08_RS19085;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=AD08_RS19085;old_locus_tag=AD08_0596 NZ_JHDJ01000117.1 Protein Homology CDS 21198 21611 . + 0 ID=cds-WP_000637953.1;Parent=gene-AD08_RS19085;Dbxref=Genbank:WP_000637953.1;Name=WP_000637953.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415129.1;locus_tag=AD08_RS19085;product=proofreading thioesterase EntH;protein_id=WP_000637953.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 21792 23897 . + . ID=gene-AD08_RS19080;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=AD08_RS19080;old_locus_tag=AD08_0597 NZ_JHDJ01000117.1 Protein Homology CDS 21792 23897 . + 0 ID=cds-WP_001043156.1;Parent=gene-AD08_RS19080;Dbxref=Genbank:WP_001043156.1;Name=WP_001043156.1;gbkey=CDS;gene=cstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415130.1;locus_tag=AD08_RS19080;product=carbon starvation protein CstA;protein_id=WP_001043156.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 24080 24277 . + . ID=gene-AD08_RS19075;Name=AD08_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19075;old_locus_tag=AD08_0598 NZ_JHDJ01000117.1 Protein Homology CDS 24080 24277 . + 0 ID=cds-WP_000460431.1;Parent=gene-AD08_RS19075;Dbxref=Genbank:WP_000460431.1;Name=WP_000460431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706454.1;locus_tag=AD08_RS19075;product=YbdD/YjiX family protein;protein_id=WP_000460431.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 24287 25375 . - . ID=gene-AD08_RS19070;Name=hcxA;gbkey=Gene;gene=hcxA;gene_biotype=protein_coding;locus_tag=AD08_RS19070;old_locus_tag=AD08_0599 NZ_JHDJ01000117.1 Protein Homology CDS 24287 25375 . - 0 ID=cds-WP_001120441.1;Parent=gene-AD08_RS19070;Dbxref=Genbank:WP_001120441.1;Name=WP_001120441.1;gbkey=CDS;gene=hcxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415132.1;locus_tag=AD08_RS19070;product=hydroxycarboxylate dehydrogenase HcxA;protein_id=WP_001120441.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 25484 26644 . + . ID=gene-AD08_RS19065;Name=ybdL;gbkey=Gene;gene=ybdL;gene_biotype=protein_coding;locus_tag=AD08_RS19065;old_locus_tag=AD08_0600 NZ_JHDJ01000117.1 Protein Homology CDS 25484 26644 . + 0 ID=cds-WP_000183907.1;Parent=gene-AD08_RS19065;Dbxref=Genbank:WP_000183907.1;Name=WP_000183907.1;gbkey=CDS;gene=ybdL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415133.1;locus_tag=AD08_RS19065;product=methionine-oxo-acid transaminase;protein_id=WP_000183907.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 26645 27274 . - . ID=gene-AD08_RS19060;Name=AD08_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19060;old_locus_tag=AD08_0601 NZ_JHDJ01000117.1 Protein Homology CDS 26645 27274 . - 0 ID=cds-WP_000502945.1;Parent=gene-AD08_RS19060;Dbxref=Genbank:WP_000502945.1;Name=WP_000502945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415134.1;locus_tag=AD08_RS19060;product=ParB-like nuclease domain-containing protein;protein_id=WP_000502945.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 27247 28467 . - . ID=gene-AD08_RS19055;Name=AD08_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19055;old_locus_tag=AD08_0602 NZ_JHDJ01000117.1 Protein Homology CDS 27247 28467 . - 0 ID=cds-WP_000029825.1;Parent=gene-AD08_RS19055;Dbxref=Genbank:WP_000029825.1;Name=WP_000029825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415135.1;locus_tag=AD08_RS19055;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000029825.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 28614 29516 . - . ID=gene-AD08_RS19050;Name=AD08_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19050;old_locus_tag=AD08_0603 NZ_JHDJ01000117.1 Protein Homology CDS 28614 29516 . - 0 ID=cds-WP_032218226.1;Parent=gene-AD08_RS19050;Dbxref=Genbank:WP_032218226.1;Name=WP_032218226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415136.1;locus_tag=AD08_RS19050;product=LysR family transcriptional regulator;protein_id=WP_032218226.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 29725 30471 . - . ID=gene-AD08_RS19045;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=AD08_RS19045;old_locus_tag=AD08_0604 NZ_JHDJ01000117.1 Protein Homology CDS 29725 30471 . - 0 ID=cds-WP_032218228.1;Parent=gene-AD08_RS19045;Dbxref=Genbank:WP_032218228.1;Name=WP_032218228.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415137.2;locus_tag=AD08_RS19045;product=thiol:disulfide interchange protein DsbG;protein_id=WP_032218228.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 30843 31406 . + . ID=gene-AD08_RS19040;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=AD08_RS19040;old_locus_tag=AD08_0605 NZ_JHDJ01000117.1 Protein Homology CDS 30843 31406 . + 0 ID=cds-WP_000052796.1;Parent=gene-AD08_RS19040;Dbxref=Genbank:WP_000052796.1;Name=WP_000052796.1;gbkey=CDS;gene=ahpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=AD08_RS19040;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052796.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 31651 33216 . + . ID=gene-AD08_RS19035;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=AD08_RS19035;old_locus_tag=AD08_0607 NZ_JHDJ01000117.1 Protein Homology CDS 31651 33216 . + 0 ID=cds-WP_000887629.1;Parent=gene-AD08_RS19035;Dbxref=Genbank:WP_000887629.1;Name=WP_000887629.1;gbkey=CDS;gene=ahpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415139.2;locus_tag=AD08_RS19035;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887629.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 33337 33765 . - . ID=gene-AD08_RS0125075;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=AD08_RS0125075 NZ_JHDJ01000117.1 Protein Homology CDS 33337 33765 . - 0 ID=cds-WP_000278509.1;Parent=gene-AD08_RS0125075;Dbxref=Genbank:WP_000278509.1;Name=WP_000278509.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415140.1;locus_tag=AD08_RS0125075;product=universal stress protein UspG;protein_id=WP_000278509.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 33986 35224 . + . ID=gene-AD08_RS19030;Name=AD08_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS19030;old_locus_tag=AD08_0610 NZ_JHDJ01000117.1 Protein Homology CDS 33986 35224 . + 0 ID=cds-WP_000646173.1;Parent=gene-AD08_RS19030;Dbxref=Genbank:WP_000646173.1;Name=WP_000646173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415141.1;locus_tag=AD08_RS19030;product=glutathione-dependent formaldehyde dehydrogenase;protein_id=WP_000646173.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 35455 35865 . - . ID=gene-AD08_RS19025;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=AD08_RS19025;old_locus_tag=AD08_0612 NZ_JHDJ01000117.1 Protein Homology CDS 35455 35865 . - 0 ID=cds-WP_000089731.1;Parent=gene-AD08_RS19025;Dbxref=Genbank:WP_000089731.1;Name=WP_000089731.1;gbkey=CDS;gene=rnk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308676.1;locus_tag=AD08_RS19025;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089731.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 36095 36901 . - . ID=gene-AD08_RS19020;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=AD08_RS19020;old_locus_tag=AD08_0613 NZ_JHDJ01000117.1 Protein Homology CDS 36095 36901 . - 0 ID=cds-WP_000643397.1;Parent=gene-AD08_RS19020;Dbxref=Genbank:WP_000643397.1;Name=WP_000643397.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415144.1;locus_tag=AD08_RS19020;product=ribonuclease I;protein_id=WP_000643397.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 37015 38478 . - . ID=gene-AD08_RS19015;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=AD08_RS19015;old_locus_tag=AD08_0614 NZ_JHDJ01000117.1 Protein Homology CDS 37015 38478 . - 0 ID=cds-WP_000050323.1;Parent=gene-AD08_RS19015;Dbxref=Genbank:WP_000050323.1;Name=WP_000050323.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308678.1;locus_tag=AD08_RS19015;product=citrate/succinate antiporter CitT;protein_id=WP_000050323.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 38529 39407 . - . ID=gene-AD08_RS19010;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=AD08_RS19010;old_locus_tag=AD08_0615 NZ_JHDJ01000117.1 Protein Homology CDS 38529 39407 . - 0 ID=cds-WP_032218231.1;Parent=gene-AD08_RS19010;Dbxref=Genbank:WP_032218231.1;Name=WP_032218231.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415146.1;locus_tag=AD08_RS19010;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_032218231.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 39382 39933 . - . ID=gene-AD08_RS19005;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=AD08_RS19005;old_locus_tag=AD08_0616 NZ_JHDJ01000117.1 Protein Homology CDS 39382 39933 . - 0 ID=cds-WP_000550422.1;Parent=gene-AD08_RS19005;Dbxref=Genbank:WP_000550422.1;Name=WP_000550422.1;gbkey=CDS;gene=citX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308680.1;locus_tag=AD08_RS19005;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_000550422.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 39937 41469 . - . ID=gene-AD08_RS19000;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=AD08_RS19000;old_locus_tag=AD08_0617 NZ_JHDJ01000117.1 Protein Homology CDS 39937 41469 . - 0 ID=cds-WP_000192245.1;Parent=gene-AD08_RS19000;Dbxref=Genbank:WP_000192245.1;Name=WP_000192245.1;gbkey=CDS;gene=citF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415148.1;locus_tag=AD08_RS19000;product=citrate lyase subunit alpha;protein_id=WP_000192245.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 41480 42388 . - . ID=gene-AD08_RS18995;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=AD08_RS18995;old_locus_tag=AD08_0618 NZ_JHDJ01000117.1 Protein Homology CDS 41480 42388 . - 0 ID=cds-WP_001432639.1;Parent=gene-AD08_RS18995;Dbxref=Genbank:WP_001432639.1;Name=WP_001432639.1;gbkey=CDS;gene=citE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415149.4;locus_tag=AD08_RS18995;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_001432639.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 42385 42681 . - . ID=gene-AD08_RS18990;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=AD08_RS18990;old_locus_tag=AD08_0619 NZ_JHDJ01000117.1 Protein Homology CDS 42385 42681 . - 0 ID=cds-WP_001484392.1;Parent=gene-AD08_RS18990;Dbxref=Genbank:WP_001484392.1;Name=WP_001484392.1;gbkey=CDS;gene=citD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308683.1;locus_tag=AD08_RS18990;product=citrate lyase acyl carrier protein;protein_id=WP_001484392.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 42696 43754 . - . ID=gene-AD08_RS18985;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=AD08_RS18985;old_locus_tag=AD08_0620 NZ_JHDJ01000117.1 Protein Homology CDS 42696 43754 . - 0 ID=cds-WP_000467705.1;Parent=gene-AD08_RS18985;Dbxref=Genbank:WP_000467705.1;Name=WP_000467705.1;gbkey=CDS;gene=citC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415151.4;locus_tag=AD08_RS18985;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467705.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 44133 45791 . + . ID=gene-AD08_RS18980;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=AD08_RS18980;old_locus_tag=AD08_0621 NZ_JHDJ01000117.1 Protein Homology CDS 44133 45791 . + 0 ID=cds-WP_000939767.1;Parent=gene-AD08_RS18980;Dbxref=Genbank:WP_000939767.1;Name=WP_000939767.1;gbkey=CDS;gene=dpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415152.1;locus_tag=AD08_RS18980;product=sensor histidine kinase DpiB;protein_id=WP_000939767.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 45760 46440 . + . ID=gene-AD08_RS18975;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=AD08_RS18975;old_locus_tag=AD08_0622 NZ_JHDJ01000117.1 Protein Homology CDS 45760 46440 . + 0 ID=cds-WP_000126500.1;Parent=gene-AD08_RS18975;Dbxref=Genbank:WP_000126500.1;Name=WP_000126500.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308686.1;locus_tag=AD08_RS18975;product=two-component response regulator DpiA;protein_id=WP_000126500.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq gene 46481 47866 . - . ID=gene-AD08_RS18970;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AD08_RS18970;old_locus_tag=AD08_0623 NZ_JHDJ01000117.1 Protein Homology CDS 46481 47866 . - 0 ID=cds-WP_000955063.1;Parent=gene-AD08_RS18970;Dbxref=Genbank:WP_000955063.1;Name=WP_000955063.1;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308687.1;locus_tag=AD08_RS18970;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000955063.1;transl_table=11 NZ_JHDJ01000117.1 RefSeq pseudogene 48655 48976 . + . ID=gene-AD08_RS0125085;Name=AD08_RS0125085;end_range=48976,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125085;partial=true;pseudo=true NZ_JHDJ01000117.1 Protein Homology CDS 48655 48976 . + 0 ID=cds-AD08_RS0125085;Parent=gene-AD08_RS0125085;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=48976,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS0125085;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000118.1 1 39436 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000118.1 RefSeq region 1 39436 . + . ID=NZ_JHDJ01000118.1:1..39436;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000118.1 RefSeq pseudogene 1 493 . + . ID=gene-AD08_RS18965;Name=AD08_RS18965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS18965;old_locus_tag=AD08_0627;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000118.1 Protein Homology CDS 1 493 . + 2 ID=cds-AD08_RS18965;Parent=gene-AD08_RS18965;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS18965;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000118.1 RefSeq pseudogene 508 933 . + . ID=gene-AD08_RS0125090;Name=pagp;gbkey=Gene;gene=pagp;gene_biotype=pseudogene;locus_tag=AD08_RS0125090;partial=true;pseudo=true;start_range=.,508 NZ_JHDJ01000118.1 Protein Homology CDS 508 933 . + 0 ID=cds-AD08_RS0125090;Parent=gene-AD08_RS0125090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=pagp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308688.1;locus_tag=AD08_RS0125090;partial=true;product=lipid IV(A) palmitoyltransferase PagP;pseudo=true;start_range=.,508;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 1108 1317 . + . ID=gene-AD08_RS18960;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AD08_RS18960;old_locus_tag=AD08_0629 NZ_JHDJ01000118.1 Protein Homology CDS 1108 1317 . + 0 ID=cds-WP_000034825.1;Parent=gene-AD08_RS18960;Dbxref=Genbank:WP_000034825.1;Name=WP_000034825.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436076.1;locus_tag=AD08_RS18960;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034825.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 1371 1754 . - . ID=gene-AD08_RS18955;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AD08_RS18955;old_locus_tag=AD08_0630 NZ_JHDJ01000118.1 Protein Homology CDS 1371 1754 . - 0 ID=cds-WP_000939747.1;Parent=gene-AD08_RS18955;Dbxref=Genbank:WP_000939747.1;Name=WP_000939747.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415157.1;locus_tag=AD08_RS18955;product=fluoride efflux transporter CrcB;protein_id=WP_000939747.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq pseudogene 1847 2634 . + . ID=gene-AD08_RS0125095;Name=AD08_RS0125095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125095;pseudo=true NZ_JHDJ01000118.1 Protein Homology CDS 1847 2634 . + 0 ID=cds-AD08_RS0125095;Parent=gene-AD08_RS0125095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308691.1;locus_tag=AD08_RS0125095;product=deaminated glutathione amidase;pseudo=true;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 2763 2966 . + . ID=gene-AD08_RS18950;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=AD08_RS18950;old_locus_tag=AD08_0633 NZ_JHDJ01000118.1 Protein Homology CDS 2763 2966 . + 0 ID=cds-WP_000503931.1;Parent=gene-AD08_RS18950;Dbxref=Genbank:WP_000503931.1;Name=WP_000503931.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308692.1;locus_tag=AD08_RS18950;product=twin-arginine translocase subunit TatE;protein_id=WP_000503931.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 3067 4032 . - . ID=gene-AD08_RS18945;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=AD08_RS18945;old_locus_tag=AD08_0634 NZ_JHDJ01000118.1 Protein Homology CDS 3067 4032 . - 0 ID=cds-WP_000042632.1;Parent=gene-AD08_RS18945;Dbxref=Genbank:WP_000042632.1;Name=WP_000042632.1;gbkey=CDS;gene=lipA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=AD08_RS18945;product=lipoyl synthase;protein_id=WP_000042632.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 4241 5194 . - . ID=gene-AD08_RS18940;Name=AD08_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18940;old_locus_tag=AD08_0635 NZ_JHDJ01000118.1 Protein Homology CDS 4241 5194 . - 0 ID=cds-WP_000378026.1;Parent=gene-AD08_RS18940;Dbxref=Genbank:WP_000378026.1;Name=WP_000378026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415162.4;locus_tag=AD08_RS18940;product=DNA-binding transcriptional regulator;protein_id=WP_000378026.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 5453 6094 . - . ID=gene-AD08_RS18935;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=AD08_RS18935;old_locus_tag=AD08_0636 NZ_JHDJ01000118.1 Protein Homology CDS 5453 6094 . - 0 ID=cds-WP_000284027.1;Parent=gene-AD08_RS18935;Dbxref=Genbank:WP_000284027.1;Name=WP_000284027.1;gbkey=CDS;gene=lipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=AD08_RS18935;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284027.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 6195 6458 . - . ID=gene-AD08_RS18930;Name=AD08_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18930;old_locus_tag=AD08_0637 NZ_JHDJ01000118.1 Protein Homology CDS 6195 6458 . - 0 ID=cds-WP_000850550.1;Parent=gene-AD08_RS18930;Dbxref=Genbank:WP_000850550.1;Name=WP_000850550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308696.1;locus_tag=AD08_RS18930;product=YbeD family protein;protein_id=WP_000850550.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 6568 7779 . - . ID=gene-AD08_RS18925;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=AD08_RS18925;old_locus_tag=AD08_0638 NZ_JHDJ01000118.1 Protein Homology CDS 6568 7779 . - 0 ID=cds-WP_001092082.1;Parent=gene-AD08_RS18925;Dbxref=Genbank:WP_001092082.1;Name=WP_001092082.1;gbkey=CDS;gene=dacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415165.1;locus_tag=AD08_RS18925;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_001092082.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 7918 9006 . - . ID=gene-AD08_RS18920;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=AD08_RS18920;old_locus_tag=AD08_0640 NZ_JHDJ01000118.1 Protein Homology CDS 7918 9006 . - 0 ID=cds-WP_001393900.1;Parent=gene-AD08_RS18920;Dbxref=Genbank:WP_001393900.1;Name=WP_001393900.1;gbkey=CDS;gene=rlpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415166.1;locus_tag=AD08_RS18920;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_001393900.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 9017 10129 . - . ID=gene-AD08_RS18915;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=AD08_RS18915;old_locus_tag=AD08_0641 NZ_JHDJ01000118.1 Protein Homology CDS 9017 10129 . - 0 ID=cds-WP_000131719.1;Parent=gene-AD08_RS18915;Dbxref=Genbank:WP_000131719.1;Name=WP_000131719.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=AD08_RS18915;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131719.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 10132 12033 . - . ID=gene-AD08_RS18910;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=AD08_RS18910;old_locus_tag=AD08_0642 NZ_JHDJ01000118.1 Protein Homology CDS 10132 12033 . - 0 ID=cds-WP_000776191.1;Parent=gene-AD08_RS18910;Dbxref=Genbank:WP_000776191.1;Name=WP_000776191.1;gbkey=CDS;gene=mrdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308700.1;locus_tag=AD08_RS18910;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000776191.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 12064 12531 . - . ID=gene-AD08_RS18905;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=AD08_RS18905;old_locus_tag=AD08_0643 NZ_JHDJ01000118.1 Protein Homology CDS 12064 12531 . - 0 ID=cds-WP_000776104.1;Parent=gene-AD08_RS18905;Dbxref=Genbank:WP_000776104.1;Name=WP_000776104.1;gbkey=CDS;gene=rlmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010618862.1;locus_tag=AD08_RS18905;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776104.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 12535 12852 . - . ID=gene-AD08_RS18900;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;gene_synonym=rsfA;locus_tag=AD08_RS18900;old_locus_tag=AD08_0644 NZ_JHDJ01000118.1 Protein Homology CDS 12535 12852 . - 0 ID=cds-WP_001161664.1;Parent=gene-AD08_RS18900;Dbxref=Genbank:WP_001161664.1;Name=WP_001161664.1;gbkey=CDS;gene=rsfS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308702.2;locus_tag=AD08_RS18900;product=ribosome silencing factor;protein_id=WP_001161664.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 13112 13723 . - . ID=gene-AD08_RS18895;Name=AD08_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18895;old_locus_tag=AD08_0645 NZ_JHDJ01000118.1 Protein Homology CDS 13112 13723 . - 0 ID=cds-WP_001241872.1;Parent=gene-AD08_RS18895;Dbxref=Genbank:WP_001241872.1;Name=WP_001241872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415171.1;locus_tag=AD08_RS18895;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001241872.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 13747 14388 . - . ID=gene-AD08_RS18890;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=AD08_RS18890;old_locus_tag=AD08_0646 NZ_JHDJ01000118.1 Protein Homology CDS 13747 14388 . - 0 ID=cds-WP_000838889.1;Parent=gene-AD08_RS18890;Dbxref=Genbank:WP_000838889.1;Name=WP_000838889.1;gbkey=CDS;gene=nadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415172.1;locus_tag=AD08_RS18890;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_000838889.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 14390 15421 . - . ID=gene-AD08_RS18885;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=AD08_RS18885;old_locus_tag=AD08_0647 NZ_JHDJ01000118.1 Protein Homology CDS 14390 15421 . - 0 ID=cds-WP_000620535.1;Parent=gene-AD08_RS18885;Dbxref=Genbank:WP_000620535.1;Name=WP_000620535.1;gbkey=CDS;gene=holA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415173.1;locus_tag=AD08_RS18885;product=DNA polymerase III subunit delta;protein_id=WP_000620535.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 15421 16002 . - . ID=gene-AD08_RS18880;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=AD08_RS18880;old_locus_tag=AD08_0648 NZ_JHDJ01000118.1 Protein Homology CDS 15421 16002 . - 0 ID=cds-WP_001512520.1;Parent=gene-AD08_RS18880;Dbxref=Genbank:WP_001512520.1;Name=WP_001512520.1;gbkey=CDS;gene=lptE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415174.1;locus_tag=AD08_RS18880;product=LPS assembly lipoprotein LptE;protein_id=WP_001512520.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 16017 18599 . - . ID=gene-AD08_RS18875;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AD08_RS18875;old_locus_tag=AD08_0649 NZ_JHDJ01000118.1 Protein Homology CDS 16017 18599 . - 0 ID=cds-WP_001645062.1;Parent=gene-AD08_RS18875;Dbxref=Genbank:WP_001645062.1;Name=WP_001645062.1;gbkey=CDS;gene=leuS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=AD08_RS18875;product=leucine--tRNA ligase;protein_id=WP_001645062.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 18834 19316 . + . ID=gene-AD08_RS18870;Name=AD08_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18870;old_locus_tag=AD08_0650 NZ_JHDJ01000118.1 Protein Homology CDS 18834 19316 . + 0 ID=cds-WP_001044880.1;Parent=gene-AD08_RS18870;Dbxref=Genbank:WP_001044880.1;Name=WP_001044880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308708.1;locus_tag=AD08_RS18870;product=zinc ribbon-containing protein;protein_id=WP_001044880.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 19386 20363 . - . ID=gene-AD08_RS18865;Name=AD08_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18865;old_locus_tag=AD08_0651 NZ_JHDJ01000118.1 Protein Homology CDS 19386 20363 . - 0 ID=cds-WP_000578178.1;Parent=gene-AD08_RS18865;Dbxref=Genbank:WP_000578178.1;Name=WP_000578178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415177.4;locus_tag=AD08_RS18865;product=SEL1-like repeat protein;protein_id=WP_000578178.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 20527 21234 . + . ID=gene-AD08_RS18860;Name=AD08_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18860;old_locus_tag=AD08_0652 NZ_JHDJ01000118.1 Protein Homology CDS 20527 21234 . + 0 ID=cds-WP_000367023.1;Parent=gene-AD08_RS18860;Dbxref=Genbank:WP_000367023.1;Name=WP_000367023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415178.1;locus_tag=AD08_RS18860;product=DUF1266 domain-containing protein;protein_id=WP_000367023.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 21231 22658 . + . ID=gene-AD08_RS18855;Name=AD08_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18855;old_locus_tag=AD08_0653 NZ_JHDJ01000118.1 Protein Homology CDS 21231 22658 . + 0 ID=cds-WP_000786572.1;Parent=gene-AD08_RS18855;Dbxref=Genbank:WP_000786572.1;Name=WP_000786572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415179.1;locus_tag=AD08_RS18855;product=J domain-containing protein;protein_id=WP_000786572.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 22668 23222 . - . ID=gene-AD08_RS18850;Name=AD08_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18850;old_locus_tag=AD08_0654 NZ_JHDJ01000118.1 Protein Homology CDS 22668 23222 . - 0 ID=cds-WP_001035673.1;Parent=gene-AD08_RS18850;Dbxref=Genbank:WP_001035673.1;Name=WP_001035673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308712.1;locus_tag=AD08_RS18850;product=sel1 repeat family protein;protein_id=WP_001035673.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 23324 24031 . + . ID=gene-AD08_RS18845;Name=AD08_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18845;old_locus_tag=AD08_0655 NZ_JHDJ01000118.1 Protein Homology CDS 23324 24031 . + 0 ID=cds-WP_001030934.1;Parent=gene-AD08_RS18845;Dbxref=Genbank:WP_001030934.1;Name=WP_001030934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415181.1;locus_tag=AD08_RS18845;product=DUF1266 domain-containing protein;protein_id=WP_001030934.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 24028 25479 . + . ID=gene-AD08_RS18840;Name=djlC;gbkey=Gene;gene=djlC;gene_biotype=protein_coding;locus_tag=AD08_RS18840;old_locus_tag=AD08_0656 NZ_JHDJ01000118.1 Protein Homology CDS 24028 25479 . + 0 ID=cds-WP_001300403.1;Parent=gene-AD08_RS18840;Dbxref=Genbank:WP_001300403.1;Name=WP_001300403.1;gbkey=CDS;gene=djlC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415182.1;locus_tag=AD08_RS18840;product=co-chaperone DjlC;protein_id=WP_001300403.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 25539 27209 . - . ID=gene-AD08_RS18835;Name=AD08_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18835;old_locus_tag=AD08_0657 NZ_JHDJ01000118.1 Protein Homology CDS 25539 27209 . - 0 ID=cds-WP_000367875.1;Parent=gene-AD08_RS18835;Dbxref=Genbank:WP_000367875.1;Name=WP_000367875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415183.1;locus_tag=AD08_RS18835;product=molecular chaperone HscC;protein_id=WP_000367875.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 27293 28228 . - . ID=gene-AD08_RS18830;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=AD08_RS18830;old_locus_tag=AD08_0658 NZ_JHDJ01000118.1 Protein Homology CDS 27293 28228 . - 0 ID=cds-WP_032218239.1;Parent=gene-AD08_RS18830;Dbxref=Genbank:WP_032218239.1;Name=WP_032218239.1;gbkey=CDS;gene=rihA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415184.1;locus_tag=AD08_RS18830;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_032218239.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 28346 29071 . - . ID=gene-AD08_RS18825;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=AD08_RS18825;old_locus_tag=AD08_0659 NZ_JHDJ01000118.1 Protein Homology CDS 28346 29071 . - 0 ID=cds-WP_000631384.1;Parent=gene-AD08_RS18825;Dbxref=Genbank:WP_000631384.1;Name=WP_000631384.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020457015.1;locus_tag=AD08_RS18825;product=glutamate/aspartate ABC transporter ATP binding protein GltL;protein_id=WP_000631384.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 29071 29745 . - . ID=gene-AD08_RS18820;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=AD08_RS18820;old_locus_tag=AD08_0660 NZ_JHDJ01000118.1 Protein Homology CDS 29071 29745 . - 0 ID=cds-WP_000272824.1;Parent=gene-AD08_RS18820;Dbxref=Genbank:WP_000272824.1;Name=WP_000272824.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308719.1;locus_tag=AD08_RS18820;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272824.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 29745 30485 . - . ID=gene-AD08_RS18815;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=AD08_RS18815;old_locus_tag=AD08_0661 NZ_JHDJ01000118.1 Protein Homology CDS 29745 30485 . - 0 ID=cds-WP_000020941.1;Parent=gene-AD08_RS18815;Dbxref=Genbank:WP_000020941.1;Name=WP_000020941.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415187.1;locus_tag=AD08_RS18815;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020941.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 30655 31563 . - . ID=gene-AD08_RS18810;Name=gltI;gbkey=Gene;gene=gltI;gene_biotype=protein_coding;locus_tag=AD08_RS18810;old_locus_tag=AD08_0662 NZ_JHDJ01000118.1 Protein Homology CDS 30655 31563 . - 0 ID=cds-WP_001177086.1;Parent=gene-AD08_RS18810;Dbxref=Genbank:WP_001177086.1;Name=WP_001177086.1;gbkey=CDS;gene=gltI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415188.1;locus_tag=AD08_RS18810;product=glutamate/aspartate ABC transporter substrate-binding protein GltI;protein_id=WP_001177086.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 31960 33498 . - . ID=gene-AD08_RS18805;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AD08_RS18805;old_locus_tag=AD08_0664 NZ_JHDJ01000118.1 Protein Homology CDS 31960 33498 . - 0 ID=cds-WP_000853021.1;Parent=gene-AD08_RS18805;Dbxref=Genbank:WP_000853021.1;Name=WP_000853021.1;gbkey=CDS;gene=lnt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415190.1;locus_tag=AD08_RS18805;product=apolipoprotein N-acyltransferase;protein_id=WP_000853021.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 33523 34401 . - . ID=gene-AD08_RS18800;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=AD08_RS18800;old_locus_tag=AD08_0665 NZ_JHDJ01000118.1 Protein Homology CDS 33523 34401 . - 0 ID=cds-WP_001278605.1;Parent=gene-AD08_RS18800;Dbxref=Genbank:WP_001278605.1;Name=WP_001278605.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;gbkey=CDS;gene=corC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308723.1;locus_tag=AD08_RS18800;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278605.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 34491 34958 . - . ID=gene-AD08_RS18795;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=AD08_RS18795;old_locus_tag=AD08_0666 NZ_JHDJ01000118.1 Protein Homology CDS 34491 34958 . - 0 ID=cds-WP_000084469.1;Parent=gene-AD08_RS18795;Dbxref=Genbank:WP_000084469.1;Name=WP_000084469.1;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169133.1;locus_tag=AD08_RS18795;product=rRNA maturation RNase YbeY;protein_id=WP_000084469.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 34955 36034 . - . ID=gene-AD08_RS18790;Name=AD08_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18790;old_locus_tag=AD08_0667 NZ_JHDJ01000118.1 Protein Homology CDS 34955 36034 . - 0 ID=cds-WP_000490838.1;Parent=gene-AD08_RS18790;Dbxref=Genbank:WP_000490838.1;Name=WP_000490838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706552.2;locus_tag=AD08_RS18790;product=PhoH family protein;protein_id=WP_000490838.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 36148 37572 . - . ID=gene-AD08_RS18785;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=AD08_RS18785;old_locus_tag=AD08_0668 NZ_JHDJ01000118.1 Protein Homology CDS 36148 37572 . - 0 ID=cds-WP_000162740.1;Parent=gene-AD08_RS18785;Dbxref=Genbank:WP_000162740.1;Name=WP_000162740.1;gbkey=CDS;gene=miaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308726.1;locus_tag=AD08_RS18785;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_000162740.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 37718 38893 . + . ID=gene-AD08_RS18780;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AD08_RS18780;old_locus_tag=AD08_0669 NZ_JHDJ01000118.1 Protein Homology CDS 37718 38893 . + 0 ID=cds-WP_000184541.1-2;Parent=gene-AD08_RS18780;Dbxref=Genbank:WP_000184541.1;Name=WP_000184541.1;gbkey=CDS;gene=ubiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AD08_RS18780;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=WP_000184541.1;transl_table=11 NZ_JHDJ01000118.1 RefSeq gene 39047 39121 . - . ID=gene-AD08_RS18775;Name=AD08_RS18775;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18775;old_locus_tag=AD08_0671 NZ_JHDJ01000118.1 tRNAscan-SE tRNA 39047 39121 . - . ID=rna-AD08_RS18775;Parent=gene-AD08_RS18775;anticodon=(pos:complement(39087..39089));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18775;product=tRNA-Gln NZ_JHDJ01000118.1 tRNAscan-SE exon 39047 39121 . - . ID=exon-AD08_RS18775-1;Parent=rna-AD08_RS18775;anticodon=(pos:complement(39087..39089));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18775;product=tRNA-Gln NZ_JHDJ01000118.1 RefSeq gene 39169 39245 . - . ID=gene-AD08_RS18770;Name=AD08_RS18770;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18770;old_locus_tag=AD08_0672 NZ_JHDJ01000118.1 tRNAscan-SE tRNA 39169 39245 . - . ID=rna-AD08_RS18770;Parent=gene-AD08_RS18770;anticodon=(pos:complement(39209..39211));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18770;product=tRNA-Met NZ_JHDJ01000118.1 tRNAscan-SE exon 39169 39245 . - . ID=exon-AD08_RS18770-1;Parent=rna-AD08_RS18770;anticodon=(pos:complement(39209..39211));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18770;product=tRNA-Met NZ_JHDJ01000118.1 RefSeq gene 39261 39335 . - . ID=gene-AD08_RS18765;Name=AD08_RS18765;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18765;old_locus_tag=AD08_0673 NZ_JHDJ01000118.1 tRNAscan-SE tRNA 39261 39335 . - . ID=rna-AD08_RS18765;Parent=gene-AD08_RS18765;anticodon=(pos:complement(39301..39303));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18765;product=tRNA-Gln NZ_JHDJ01000118.1 tRNAscan-SE exon 39261 39335 . - . ID=exon-AD08_RS18765-1;Parent=rna-AD08_RS18765;anticodon=(pos:complement(39301..39303));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18765;product=tRNA-Gln ##sequence-region NZ_JHDJ01000119.1 1 2267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000119.1 RefSeq region 1 2267 . + . ID=NZ_JHDJ01000119.1:1..2267;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000119.1 RefSeq pseudogene 1 168 . - . ID=gene-AD08_RS18755;Name=AD08_RS18755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS18755;old_locus_tag=AD08_0675;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000119.1 Protein Homology CDS 1 168 . - 0 ID=cds-AD08_RS18755;Parent=gene-AD08_RS18755;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308726.1;locus_tag=AD08_RS18755;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000119.1 RefSeq gene 314 1489 . + . ID=gene-AD08_RS18750;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AD08_RS18750;old_locus_tag=AD08_0676 NZ_JHDJ01000119.1 Protein Homology CDS 314 1489 . + 0 ID=cds-WP_000184541.1-3;Parent=gene-AD08_RS18750;Dbxref=Genbank:WP_000184541.1;Name=WP_000184541.1;gbkey=CDS;gene=ubiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AD08_RS18750;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=WP_000184541.1;transl_table=11 NZ_JHDJ01000119.1 RefSeq gene 1643 1717 . - . ID=gene-AD08_RS18745;Name=AD08_RS18745;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18745;old_locus_tag=AD08_0677 NZ_JHDJ01000119.1 tRNAscan-SE tRNA 1643 1717 . - . ID=rna-AD08_RS18745;Parent=gene-AD08_RS18745;anticodon=(pos:complement(1683..1685));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18745;product=tRNA-Gln NZ_JHDJ01000119.1 tRNAscan-SE exon 1643 1717 . - . ID=exon-AD08_RS18745-1;Parent=rna-AD08_RS18745;anticodon=(pos:complement(1683..1685));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18745;product=tRNA-Gln NZ_JHDJ01000119.1 RefSeq gene 1755 1829 . - . ID=gene-AD08_RS18740;Name=AD08_RS18740;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18740;old_locus_tag=AD08_0678 NZ_JHDJ01000119.1 tRNAscan-SE tRNA 1755 1829 . - . ID=rna-AD08_RS18740;Parent=gene-AD08_RS18740;anticodon=(pos:complement(1795..1797));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18740;product=tRNA-Gln NZ_JHDJ01000119.1 tRNAscan-SE exon 1755 1829 . - . ID=exon-AD08_RS18740-1;Parent=rna-AD08_RS18740;anticodon=(pos:complement(1795..1797));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18740;product=tRNA-Gln NZ_JHDJ01000119.1 RefSeq gene 1867 1941 . - . ID=gene-AD08_RS18735;Name=AD08_RS18735;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18735;old_locus_tag=AD08_0679 NZ_JHDJ01000119.1 tRNAscan-SE tRNA 1867 1941 . - . ID=rna-AD08_RS18735;Parent=gene-AD08_RS18735;anticodon=(pos:complement(1907..1909));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18735;product=tRNA-Gln NZ_JHDJ01000119.1 tRNAscan-SE exon 1867 1941 . - . ID=exon-AD08_RS18735-1;Parent=rna-AD08_RS18735;anticodon=(pos:complement(1907..1909));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18735;product=tRNA-Gln NZ_JHDJ01000119.1 RefSeq gene 1979 2053 . - . ID=gene-AD08_RS18730;Name=AD08_RS18730;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18730;old_locus_tag=AD08_0680 NZ_JHDJ01000119.1 tRNAscan-SE tRNA 1979 2053 . - . ID=rna-AD08_RS18730;Parent=gene-AD08_RS18730;anticodon=(pos:complement(2019..2021));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18730;product=tRNA-Gln NZ_JHDJ01000119.1 tRNAscan-SE exon 1979 2053 . - . ID=exon-AD08_RS18730-1;Parent=rna-AD08_RS18730;anticodon=(pos:complement(2019..2021));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18730;product=tRNA-Gln NZ_JHDJ01000119.1 RefSeq gene 2101 2177 . - . ID=gene-AD08_RS18725;Name=AD08_RS18725;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18725;old_locus_tag=AD08_0681 NZ_JHDJ01000119.1 tRNAscan-SE tRNA 2101 2177 . - . ID=rna-AD08_RS18725;Parent=gene-AD08_RS18725;anticodon=(pos:complement(2141..2143));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18725;product=tRNA-Met NZ_JHDJ01000119.1 tRNAscan-SE exon 2101 2177 . - . ID=exon-AD08_RS18725-1;Parent=rna-AD08_RS18725;anticodon=(pos:complement(2141..2143));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18725;product=tRNA-Met NZ_JHDJ01000119.1 RefSeq gene 2193 2267 . - . ID=gene-AD08_RS18720;Name=AD08_RS18720;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18720;old_locus_tag=AD08_0683 NZ_JHDJ01000119.1 tRNAscan-SE tRNA 2193 2267 . - . ID=rna-AD08_RS18720;Parent=gene-AD08_RS18720;anticodon=(pos:complement(2233..2235));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18720;product=tRNA-Gln NZ_JHDJ01000119.1 tRNAscan-SE exon 2193 2267 . - . ID=exon-AD08_RS18720-1;Parent=rna-AD08_RS18720;anticodon=(pos:complement(2233..2235));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18720;product=tRNA-Gln ##sequence-region NZ_JHDJ01000120.1 1 33490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000120.1 RefSeq region 1 33490 . + . ID=NZ_JHDJ01000120.1:1..33490;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000120.1 RefSeq gene 105 179 . - . ID=gene-AD08_RS18710;Name=AD08_RS18710;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18710;old_locus_tag=AD08_0685 NZ_JHDJ01000120.1 tRNAscan-SE tRNA 105 179 . - . ID=rna-AD08_RS18710;Parent=gene-AD08_RS18710;anticodon=(pos:complement(145..147));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18710;product=tRNA-Gln NZ_JHDJ01000120.1 tRNAscan-SE exon 105 179 . - . ID=exon-AD08_RS18710-1;Parent=rna-AD08_RS18710;anticodon=(pos:complement(145..147));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18710;product=tRNA-Gln NZ_JHDJ01000120.1 RefSeq gene 227 303 . - . ID=gene-AD08_RS18705;Name=AD08_RS18705;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18705;old_locus_tag=AD08_0686 NZ_JHDJ01000120.1 tRNAscan-SE tRNA 227 303 . - . ID=rna-AD08_RS18705;Parent=gene-AD08_RS18705;anticodon=(pos:complement(267..269));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18705;product=tRNA-Met NZ_JHDJ01000120.1 tRNAscan-SE exon 227 303 . - . ID=exon-AD08_RS18705-1;Parent=rna-AD08_RS18705;anticodon=(pos:complement(267..269));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18705;product=tRNA-Met NZ_JHDJ01000120.1 RefSeq gene 319 393 . - . ID=gene-AD08_RS18700;Name=AD08_RS18700;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18700;old_locus_tag=AD08_0687 NZ_JHDJ01000120.1 tRNAscan-SE tRNA 319 393 . - . ID=rna-AD08_RS18700;Parent=gene-AD08_RS18700;anticodon=(pos:complement(359..361));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18700;product=tRNA-Gln NZ_JHDJ01000120.1 tRNAscan-SE exon 319 393 . - . ID=exon-AD08_RS18700-1;Parent=rna-AD08_RS18700;anticodon=(pos:complement(359..361));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18700;product=tRNA-Gln NZ_JHDJ01000120.1 RefSeq gene 428 502 . - . ID=gene-AD08_RS18695;Name=AD08_RS18695;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18695;old_locus_tag=AD08_0688 NZ_JHDJ01000120.1 tRNAscan-SE tRNA 428 502 . - . ID=rna-AD08_RS18695;Parent=gene-AD08_RS18695;anticodon=(pos:complement(468..470));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18695;product=tRNA-Gln NZ_JHDJ01000120.1 tRNAscan-SE exon 428 502 . - . ID=exon-AD08_RS18695-1;Parent=rna-AD08_RS18695;anticodon=(pos:complement(468..470));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18695;product=tRNA-Gln NZ_JHDJ01000120.1 RefSeq gene 537 611 . - . ID=gene-AD08_RS18690;Name=AD08_RS18690;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18690;old_locus_tag=AD08_0689 NZ_JHDJ01000120.1 tRNAscan-SE tRNA 537 611 . - . ID=rna-AD08_RS18690;Parent=gene-AD08_RS18690;anticodon=(pos:complement(577..579));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18690;product=tRNA-Gln NZ_JHDJ01000120.1 tRNAscan-SE exon 537 611 . - . ID=exon-AD08_RS18690-1;Parent=rna-AD08_RS18690;anticodon=(pos:complement(577..579));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18690;product=tRNA-Gln NZ_JHDJ01000120.1 RefSeq gene 646 720 . - . ID=gene-AD08_RS18685;Name=AD08_RS18685;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18685;old_locus_tag=AD08_0690 NZ_JHDJ01000120.1 tRNAscan-SE tRNA 646 720 . - . ID=rna-AD08_RS18685;Parent=gene-AD08_RS18685;anticodon=(pos:complement(686..688));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18685;product=tRNA-Gln NZ_JHDJ01000120.1 tRNAscan-SE exon 646 720 . - . ID=exon-AD08_RS18685-1;Parent=rna-AD08_RS18685;anticodon=(pos:complement(686..688));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18685;product=tRNA-Gln NZ_JHDJ01000120.1 RefSeq gene 744 828 . - . ID=gene-AD08_RS18680;Name=AD08_RS18680;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18680;old_locus_tag=AD08_0691 NZ_JHDJ01000120.1 tRNAscan-SE tRNA 744 828 . - . ID=rna-AD08_RS18680;Parent=gene-AD08_RS18680;anticodon=(pos:complement(792..794));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18680;product=tRNA-Leu NZ_JHDJ01000120.1 tRNAscan-SE exon 744 828 . - . ID=exon-AD08_RS18680-1;Parent=rna-AD08_RS18680;anticodon=(pos:complement(792..794));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18680;product=tRNA-Leu NZ_JHDJ01000120.1 RefSeq gene 838 914 . - . ID=gene-AD08_RS18675;Name=AD08_RS18675;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18675;old_locus_tag=AD08_0692 NZ_JHDJ01000120.1 tRNAscan-SE tRNA 838 914 . - . ID=rna-AD08_RS18675;Parent=gene-AD08_RS18675;anticodon=(pos:complement(878..880));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18675;product=tRNA-Met NZ_JHDJ01000120.1 tRNAscan-SE exon 838 914 . - . ID=exon-AD08_RS18675-1;Parent=rna-AD08_RS18675;anticodon=(pos:complement(878..880));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18675;product=tRNA-Met NZ_JHDJ01000120.1 RefSeq gene 1294 2958 . - . ID=gene-AD08_RS18670;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=AD08_RS18670;old_locus_tag=AD08_0693 NZ_JHDJ01000120.1 Protein Homology CDS 1294 2958 . - 0 ID=cds-WP_000337077.1;Parent=gene-AD08_RS18670;Dbxref=Genbank:WP_000337077.1;Name=WP_000337077.1;gbkey=CDS;gene=asnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=AD08_RS18670;product=asparagine synthase B;protein_id=WP_000337077.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 3355 4107 . - . ID=gene-AD08_RS18665;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=AD08_RS18665;old_locus_tag=AD08_0695 NZ_JHDJ01000120.1 Protein Homology CDS 3355 4107 . - 0 ID=cds-WP_000153129.1;Parent=gene-AD08_RS18665;Dbxref=Genbank:WP_000153129.1;Name=WP_000153129.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308732.1;locus_tag=AD08_RS18665;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153129.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 4155 5375 . - . ID=gene-AD08_RS18660;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=AD08_RS18660;old_locus_tag=AD08_0696 NZ_JHDJ01000120.1 Protein Homology CDS 4155 5375 . - 0 ID=cds-WP_000187594.1;Parent=gene-AD08_RS18660;Dbxref=Genbank:WP_000187594.1;Name=WP_000187594.1;gbkey=CDS;gene=nagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308733.1;locus_tag=AD08_RS18660;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187594.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 5384 6532 . - . ID=gene-AD08_RS18655;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AD08_RS18655;old_locus_tag=AD08_0697 NZ_JHDJ01000120.1 Protein Homology CDS 5384 6532 . - 0 ID=cds-WP_000271153.1;Parent=gene-AD08_RS18655;Dbxref=Genbank:WP_000271153.1;Name=WP_000271153.1;gbkey=CDS;gene=nagA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308734.1;locus_tag=AD08_RS18655;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000271153.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 6592 7392 . - . ID=gene-AD08_RS18650;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=AD08_RS18650;old_locus_tag=AD08_0698 NZ_JHDJ01000120.1 Protein Homology CDS 6592 7392 . - 0 ID=cds-WP_001237072.1;Parent=gene-AD08_RS18650;Dbxref=Genbank:WP_001237072.1;Name=WP_001237072.1;gbkey=CDS;gene=nagB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=AD08_RS18650;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237072.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 7725 9671 . + . ID=gene-AD08_RS18645;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=AD08_RS18645;old_locus_tag=AD08_0700 NZ_JHDJ01000120.1 Protein Homology CDS 7725 9671 . + 0 ID=cds-WP_001023094.1;Parent=gene-AD08_RS18645;Dbxref=Genbank:WP_001023094.1;Name=WP_001023094.1;gbkey=CDS;gene=nagE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415205.1;locus_tag=AD08_RS18645;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_001023094.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 9874 11538 . + . ID=gene-AD08_RS18640;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=AD08_RS18640;old_locus_tag=AD08_0702 NZ_JHDJ01000120.1 Protein Homology CDS 9874 11538 . + 0 ID=cds-WP_032218247.1;Parent=gene-AD08_RS18640;Dbxref=Genbank:WP_032218247.1;Name=WP_032218247.1;gbkey=CDS;gene=glnS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415206.1;locus_tag=AD08_RS18640;product=glutamine--tRNA ligase;protein_id=WP_032218247.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 12115 13521 . + . ID=gene-AD08_RS18635;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=AD08_RS18635;old_locus_tag=AD08_0703 NZ_JHDJ01000120.1 Protein Homology CDS 12115 13521 . + 0 ID=cds-WP_001258819.1;Parent=gene-AD08_RS18635;Dbxref=Genbank:WP_001258819.1;Name=WP_001258819.1;gbkey=CDS;gene=chiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415207.1;locus_tag=AD08_RS18635;product=chitoporin;protein_id=WP_001258819.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 13571 13897 . + . ID=gene-AD08_RS18630;Name=AD08_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18630;old_locus_tag=AD08_0704 NZ_JHDJ01000120.1 Protein Homology CDS 13571 13897 . + 0 ID=cds-WP_000733579.1;Parent=gene-AD08_RS18630;Dbxref=Genbank:WP_000733579.1;Name=WP_000733579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415208.1;locus_tag=AD08_RS18630;product=chitosugar-induced verified lipoprotein;protein_id=WP_000733579.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 13981 14427 . - . ID=gene-AD08_RS18625;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=AD08_RS18625;old_locus_tag=AD08_0705 NZ_JHDJ01000120.1 Protein Homology CDS 13981 14427 . - 0 ID=cds-WP_000131702.1;Parent=gene-AD08_RS18625;Dbxref=Genbank:WP_000131702.1;Name=WP_000131702.1;gbkey=CDS;gene=fur;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308741.1;locus_tag=AD08_RS18625;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131702.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 14420 14506 . - . ID=gene-AD08_RS0125105;Name=uof;gbkey=Gene;gene=uof;gene_biotype=protein_coding;locus_tag=AD08_RS0125105 NZ_JHDJ01000120.1 Protein Homology CDS 14420 14506 . - 0 ID=cds-WP_001406816.1;Parent=gene-AD08_RS0125105;Dbxref=Genbank:WP_001406816.1;Name=WP_001406816.1;gbkey=CDS;gene=uof;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=AD08_RS0125105;product=fur leader peptide;protein_id=WP_001406816.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 14716 15246 . - . ID=gene-AD08_RS18620;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=AD08_RS18620;old_locus_tag=AD08_0706 NZ_JHDJ01000120.1 Protein Homology CDS 14716 15246 . - 0 ID=cds-WP_001018618.1;Parent=gene-AD08_RS18620;Dbxref=Genbank:WP_001018618.1;Name=WP_001018618.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308742.1;locus_tag=AD08_RS18620;product=flavodoxin FldA;protein_id=WP_001018618.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 15386 15748 . - . ID=gene-AD08_RS18615;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=AD08_RS18615;old_locus_tag=AD08_0707 NZ_JHDJ01000120.1 Protein Homology CDS 15386 15748 . - 0 ID=cds-WP_000291238.1;Parent=gene-AD08_RS18615;Dbxref=Genbank:WP_000291238.1;Name=WP_000291238.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308743.1;locus_tag=AD08_RS18615;product=LexA regulated protein;protein_id=WP_000291238.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 15819 16583 . - . ID=gene-AD08_RS18610;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=AD08_RS18610;old_locus_tag=AD08_0708 NZ_JHDJ01000120.1 Protein Homology CDS 15819 16583 . - 0 ID=cds-WP_000773288.1;Parent=gene-AD08_RS18610;Dbxref=Genbank:WP_000773288.1;Name=WP_000773288.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415212.1;locus_tag=AD08_RS18610;product=esterase;protein_id=WP_000773288.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 16768 17313 . + . ID=gene-AD08_RS18605;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=AD08_RS18605;old_locus_tag=AD08_0709 NZ_JHDJ01000120.1 Protein Homology CDS 16768 17313 . + 0 ID=cds-WP_000848387.1;Parent=gene-AD08_RS18605;Dbxref=Genbank:WP_000848387.1;Name=WP_000848387.1;gbkey=CDS;gene=seqA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415213.1;locus_tag=AD08_RS18605;product=replication initiation negative regulator SeqA;protein_id=WP_000848387.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 17339 18979 . + . ID=gene-AD08_RS18600;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=AD08_RS18600;old_locus_tag=AD08_0710 NZ_JHDJ01000120.1 Protein Homology CDS 17339 18979 . + 0 ID=cds-WP_001297249.1;Parent=gene-AD08_RS18600;Dbxref=Genbank:WP_001297249.1;Name=WP_001297249.1;gbkey=CDS;gene=pgm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415214.1;locus_tag=AD08_RS18600;product=alpha-D-glucose phosphate-specific phosphoglucomutase;protein_id=WP_001297249.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 19193 19687 . + . ID=gene-AD08_RS18595;Name=AD08_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18595;old_locus_tag=AD08_0711 NZ_JHDJ01000120.1 Protein Homology CDS 19193 19687 . + 0 ID=cds-WP_000856353.1;Parent=gene-AD08_RS18595;Dbxref=Genbank:WP_000856353.1;Name=WP_000856353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415215.1;locus_tag=AD08_RS18595;product=lipoprotein;protein_id=WP_000856353.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 19728 20378 . - . ID=gene-AD08_RS18590;Name=AD08_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18590;old_locus_tag=AD08_0712 NZ_JHDJ01000120.1 Protein Homology CDS 19728 20378 . - 0 ID=cds-WP_001208814.1;Parent=gene-AD08_RS18590;Dbxref=Genbank:WP_001208814.1;Name=WP_001208814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001208812.1;locus_tag=AD08_RS18590;product=DUF2625 domain-containing protein;protein_id=WP_001208814.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq pseudogene 20502 20699 . - . ID=gene-AD08_RS0125115;Name=AD08_RS0125115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125115;pseudo=true NZ_JHDJ01000120.1 Protein Homology CDS 20502 20699 . - 0 ID=cds-AD08_RS0125115;Parent=gene-AD08_RS0125115;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001405579.1;locus_tag=AD08_RS0125115;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 20727 22046 . - . ID=gene-AD08_RS18585;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=AD08_RS18585;old_locus_tag=AD08_0713 NZ_JHDJ01000120.1 Protein Homology CDS 20727 22046 . - 0 ID=cds-WP_000075845.1;Parent=gene-AD08_RS18585;Dbxref=Genbank:WP_000075845.1;Name=WP_000075845.1;gbkey=CDS;gene=potE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415219.1;locus_tag=AD08_RS18585;product=putrescine-ornithine antiporter;protein_id=WP_000075845.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 22043 24241 . - . ID=gene-AD08_RS18580;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=AD08_RS18580;old_locus_tag=AD08_0714 NZ_JHDJ01000120.1 Protein Homology CDS 22043 24241 . - 0 ID=cds-WP_000040192.1;Parent=gene-AD08_RS18580;Dbxref=Genbank:WP_000040192.1;Name=WP_000040192.1;gbkey=CDS;gene=speF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415220.1;locus_tag=AD08_RS18580;product=ornithine decarboxylase SpeF;protein_id=WP_000040192.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 24364 24621 . + . ID=gene-AD08_RS30325;Name=AD08_RS30325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30325 NZ_JHDJ01000120.1 Protein Homology CDS 24364 24621 . + 0 ID=cds-WP_001171592.1;Parent=gene-AD08_RS30325;Dbxref=Genbank:WP_001171592.1;Name=WP_001171592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165310.1;locus_tag=AD08_RS30325;product=hypothetical protein;protein_id=WP_001171592.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 24837 25514 . - . ID=gene-AD08_RS18575;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=AD08_RS18575;old_locus_tag=AD08_0715 NZ_JHDJ01000120.1 Protein Homology CDS 24837 25514 . - 0 ID=cds-WP_000186076.1;Parent=gene-AD08_RS18575;Dbxref=Genbank:WP_000186076.1;Name=WP_000186076.1;gbkey=CDS;gene=kdpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415222.1;locus_tag=AD08_RS18575;product=two-component system response regulator KdpE;protein_id=WP_000186076.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 25511 28195 . - . ID=gene-AD08_RS18570;Name=kdbD;gbkey=Gene;gene=kdbD;gene_biotype=protein_coding;locus_tag=AD08_RS18570;old_locus_tag=AD08_0716 NZ_JHDJ01000120.1 Protein Homology CDS 25511 28195 . - 0 ID=cds-WP_001310640.1;Parent=gene-AD08_RS18570;Dbxref=Genbank:WP_001310640.1;Name=WP_001310640.1;gbkey=CDS;gene=kdbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415223.1;locus_tag=AD08_RS18570;product=two-component system sensor histidine kinase KdbD;protein_id=WP_001310640.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 28188 28760 . - . ID=gene-AD08_RS18565;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=AD08_RS18565;old_locus_tag=AD08_0717 NZ_JHDJ01000120.1 Protein Homology CDS 28188 28760 . - 0 ID=cds-WP_001300431.1;Parent=gene-AD08_RS18565;Dbxref=Genbank:WP_001300431.1;Name=WP_001300431.1;gbkey=CDS;gene=kdpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415224.1;locus_tag=AD08_RS18565;product=K(+)-transporting ATPase subunit C;protein_id=WP_001300431.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 28769 30817 . - . ID=gene-AD08_RS18560;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=AD08_RS18560;old_locus_tag=AD08_0718 NZ_JHDJ01000120.1 Protein Homology CDS 28769 30817 . - 0 ID=cds-WP_000087939.1;Parent=gene-AD08_RS18560;Dbxref=Genbank:WP_000087939.1;Name=WP_000087939.1;gbkey=CDS;gene=kdpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415225.1;locus_tag=AD08_RS18560;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000087939.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 30840 32513 . - . ID=gene-AD08_RS18555;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=AD08_RS18555;old_locus_tag=AD08_0719 NZ_JHDJ01000120.1 Protein Homology CDS 30840 32513 . - 0 ID=cds-WP_000741131.1;Parent=gene-AD08_RS18555;Dbxref=Genbank:WP_000741131.1;Name=WP_000741131.1;gbkey=CDS;gene=kdpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415226.1;locus_tag=AD08_RS18555;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000741131.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 32513 32602 . - . ID=gene-AD08_RS0125125;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=AD08_RS0125125 NZ_JHDJ01000120.1 Protein Homology CDS 32513 32602 . - 0 ID=cds-WP_001272653.1;Parent=gene-AD08_RS0125125;Dbxref=Genbank:WP_001272653.1;Name=WP_001272653.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588443.1;locus_tag=AD08_RS0125125;product=K(+)-transporting ATPase subunit F;protein_id=WP_001272653.1;transl_table=11 NZ_JHDJ01000120.1 RefSeq gene 32915 33121 . + . ID=gene-AD08_RS18550;Name=AD08_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18550;old_locus_tag=AD08_0721 NZ_JHDJ01000120.1 Protein Homology CDS 32915 33121 . + 0 ID=cds-WP_000424924.1;Parent=gene-AD08_RS18550;Dbxref=Genbank:WP_000424924.1;Name=WP_000424924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308755.1;locus_tag=AD08_RS18550;product=YbfA family protein;protein_id=WP_000424924.1;transl_table=11 ##sequence-region NZ_JHDJ01000121.1 1 3921 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000121.1 RefSeq region 1 3921 . + . ID=NZ_JHDJ01000121.1:1..3921;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000121.1 RefSeq pseudogene 1 260 . - . ID=gene-AD08_RS28380;Name=AD08_RS28380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS28380;old_locus_tag=AD08_0723;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000121.1 Protein Homology CDS 1 260 . - 0 ID=cds-AD08_RS28380;Parent=gene-AD08_RS28380;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013747467.1;locus_tag=AD08_RS28380;partial=true;product=IS91 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000121.1 RefSeq gene 260 625 . - . ID=gene-AD08_RS18545;Name=AD08_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18545;old_locus_tag=AD08_0724 NZ_JHDJ01000121.1 GeneMarkS-2+ CDS 260 625 . - 0 ID=cds-WP_000124094.1-5;Parent=gene-AD08_RS18545;Dbxref=Genbank:WP_000124094.1;Name=WP_000124094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS18545;product=hypothetical protein;protein_id=WP_000124094.1;transl_table=11 NZ_JHDJ01000121.1 RefSeq gene 660 2240 . - . ID=gene-AD08_RS0125130;Name=AD08_RS0125130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125130 NZ_JHDJ01000121.1 Protein Homology CDS 660 2240 . - 0 ID=cds-WP_050436512.1;Parent=gene-AD08_RS0125130;Dbxref=Genbank:WP_050436512.1;Name=WP_050436512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078877.1;locus_tag=AD08_RS0125130;product=site-specific integrase;protein_id=WP_050436512.1;transl_table=11 NZ_JHDJ01000121.1 RefSeq gene 2224 3099 . - . ID=gene-AD08_RS0125135;Name=AD08_RS0125135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125135 NZ_JHDJ01000121.1 Protein Homology CDS 2224 3099 . - 0 ID=cds-WP_032218256.1;Parent=gene-AD08_RS0125135;Dbxref=Genbank:WP_032218256.1;Name=WP_032218256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059077.1;locus_tag=AD08_RS0125135;product=site-specific integrase;protein_id=WP_032218256.1;transl_table=11 NZ_JHDJ01000121.1 RefSeq pseudogene 3586 3921 . + . ID=gene-AD08_RS0125140;Name=AD08_RS0125140;end_range=3921,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125140;partial=true;pseudo=true NZ_JHDJ01000121.1 Protein Homology CDS 3586 3921 . + 0 ID=cds-AD08_RS0125140;Parent=gene-AD08_RS0125140;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=3921,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS0125140;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000122.1 1 37007 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000122.1 RefSeq region 1 37007 . + . ID=NZ_JHDJ01000122.1:1..37007;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000122.1 RefSeq pseudogene 1 459 . + . ID=gene-AD08_RS30335;Name=AD08_RS30335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30335;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000122.1 Protein Homology CDS 1 459 . + 2 ID=cds-AD08_RS30335;Parent=gene-AD08_RS30335;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS30335;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000122.1 RefSeq pseudogene 463 1086 . - . ID=gene-AD08_RS18540;Name=AD08_RS18540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS18540;old_locus_tag=AD08_0729;partial=true;pseudo=true;start_range=.,463 NZ_JHDJ01000122.1 Protein Homology CDS 463 1086 . - 0 ID=cds-AD08_RS18540;Parent=gene-AD08_RS18540;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=AD08_RS18540;partial=true;product=hypothetical protein;pseudo=true;start_range=.,463;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 1229 1987 . - . ID=gene-AD08_RS18535;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=AD08_RS18535;old_locus_tag=AD08_0730 NZ_JHDJ01000122.1 Protein Homology CDS 1229 1987 . - 0 ID=cds-WP_000860201.1;Parent=gene-AD08_RS18535;Dbxref=Genbank:WP_000860201.1;Name=WP_000860201.1;gbkey=CDS;gene=aroD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416208.1;locus_tag=AD08_RS18535;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860201.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 2018 2884 . - . ID=gene-AD08_RS18530;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=AD08_RS18530;old_locus_tag=AD08_0731 NZ_JHDJ01000122.1 Protein Homology CDS 2018 2884 . - 0 ID=cds-WP_000383469.1;Parent=gene-AD08_RS18530;Dbxref=Genbank:WP_000383469.1;Name=WP_000383469.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416207.1;locus_tag=AD08_RS18530;product=quinate/shikimate dehydrogenase;protein_id=WP_000383469.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 2896 4161 . - . ID=gene-AD08_RS18525;Name=AD08_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18525;old_locus_tag=AD08_0732 NZ_JHDJ01000122.1 Protein Homology CDS 2896 4161 . - 0 ID=cds-WP_000081197.1;Parent=gene-AD08_RS18525;Dbxref=Genbank:WP_000081197.1;Name=WP_000081197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416206.6;locus_tag=AD08_RS18525;product=MFS transporter;protein_id=WP_000081197.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 4388 5602 . - . ID=gene-AD08_RS18520;Name=AD08_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18520;old_locus_tag=AD08_0733 NZ_JHDJ01000122.1 Protein Homology CDS 4388 5602 . - 0 ID=cds-WP_000795537.1;Parent=gene-AD08_RS18520;Dbxref=Genbank:WP_000795537.1;Name=WP_000795537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416205.1;locus_tag=AD08_RS18520;product=MFS transporter;protein_id=WP_000795537.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 5702 6058 . - . ID=gene-AD08_RS18515;Name=AD08_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18515;old_locus_tag=AD08_0734 NZ_JHDJ01000122.1 Protein Homology CDS 5702 6058 . - 0 ID=cds-WP_001310864.1;Parent=gene-AD08_RS18515;Dbxref=Genbank:WP_001310864.1;Name=WP_001310864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416204.2;locus_tag=AD08_RS18515;product=YdiL family protein;protein_id=WP_001310864.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 6194 6301 . - . ID=gene-AD08_RS27425;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=AD08_RS27425 NZ_JHDJ01000122.1 cmsearch antisense_RNA 6194 6301 . - . ID=rna-AD08_RS27425;Parent=gene-AD08_RS27425;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27425;product=antisense sRNA RprA NZ_JHDJ01000122.1 cmsearch exon 6194 6301 . - . ID=exon-AD08_RS27425-1;Parent=rna-AD08_RS27425;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27425;product=antisense sRNA RprA NZ_JHDJ01000122.1 RefSeq gene 6487 7599 . - . ID=gene-AD08_RS18510;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=AD08_RS18510;old_locus_tag=AD08_0735 NZ_JHDJ01000122.1 Protein Homology CDS 6487 7599 . - 0 ID=cds-WP_000248636.1;Parent=gene-AD08_RS18510;Dbxref=Genbank:WP_000248636.1;Name=WP_000248636.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416203.1;locus_tag=AD08_RS18510;product=AI-2E family transporter YdiK;protein_id=WP_000248636.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 7988 11044 . + . ID=gene-AD08_RS18505;Name=AD08_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18505;old_locus_tag=AD08_0736 NZ_JHDJ01000122.1 Protein Homology CDS 7988 11044 . + 0 ID=cds-WP_032218265.1;Parent=gene-AD08_RS18505;Dbxref=Genbank:WP_032218265.1;Name=WP_032218265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416202.1;locus_tag=AD08_RS18505;product=FAD-binding oxidoreductase;protein_id=WP_032218265.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 11041 11451 . + . ID=gene-AD08_RS18500;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=AD08_RS18500;old_locus_tag=AD08_0737 NZ_JHDJ01000122.1 Protein Homology CDS 11041 11451 . + 0 ID=cds-WP_000637982.1;Parent=gene-AD08_RS18500;Dbxref=Genbank:WP_000637982.1;Name=WP_000637982.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416201.1;locus_tag=AD08_RS18500;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637982.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 11551 11739 . + . ID=gene-AD08_RS18495;Name=AD08_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18495;old_locus_tag=AD08_0738 NZ_JHDJ01000122.1 Protein Homology CDS 11551 11739 . + 0 ID=cds-WP_001296104.1;Parent=gene-AD08_RS18495;Dbxref=Genbank:WP_001296104.1;Name=WP_001296104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=AD08_RS18495;product=hypothetical protein;protein_id=WP_001296104.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 12287 12655 . + . ID=gene-AD08_RS18490;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=AD08_RS18490;old_locus_tag=AD08_0739 NZ_JHDJ01000122.1 Protein Homology CDS 12287 12655 . + 0 ID=cds-WP_000367160.1;Parent=gene-AD08_RS18490;Dbxref=Genbank:WP_000367160.1;Name=WP_000367160.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416199.1;locus_tag=AD08_RS18490;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000367160.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 12664 14151 . + . ID=gene-AD08_RS18485;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=AD08_RS18485;old_locus_tag=AD08_0740 NZ_JHDJ01000122.1 Protein Homology CDS 12664 14151 . + 0 ID=cds-WP_032218269.1;Parent=gene-AD08_RS18485;Dbxref=Genbank:WP_032218269.1;Name=WP_032218269.1;gbkey=CDS;gene=sufB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416198.2;locus_tag=AD08_RS18485;product=Fe-S cluster assembly protein SufB;protein_id=WP_032218269.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 14161 14907 . + . ID=gene-AD08_RS18480;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=AD08_RS18480;old_locus_tag=AD08_0741 NZ_JHDJ01000122.1 Protein Homology CDS 14161 14907 . + 0 ID=cds-WP_000948863.1;Parent=gene-AD08_RS18480;Dbxref=Genbank:WP_000948863.1;Name=WP_000948863.1;gbkey=CDS;gene=sufC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=AD08_RS18480;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948863.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 14882 16153 . + . ID=gene-AD08_RS18475;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=AD08_RS18475;old_locus_tag=AD08_0742 NZ_JHDJ01000122.1 Protein Homology CDS 14882 16153 . + 0 ID=cds-WP_000907979.1;Parent=gene-AD08_RS18475;Dbxref=Genbank:WP_000907979.1;Name=WP_000907979.1;gbkey=CDS;gene=sufD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416196.1;locus_tag=AD08_RS18475;product=Fe-S cluster assembly protein SufD;protein_id=WP_000907979.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 16150 17370 . + . ID=gene-AD08_RS18470;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=AD08_RS18470;old_locus_tag=AD08_0743 NZ_JHDJ01000122.1 Protein Homology CDS 16150 17370 . + 0 ID=cds-WP_000577988.1;Parent=gene-AD08_RS18470;Dbxref=Genbank:WP_000577988.1;Name=WP_000577988.1;gbkey=CDS;gene=sufS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416195.1;locus_tag=AD08_RS18470;product=cysteine desulfurase SufS;protein_id=WP_000577988.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 17383 17799 . + . ID=gene-AD08_RS18465;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=AD08_RS18465;old_locus_tag=AD08_0744 NZ_JHDJ01000122.1 Protein Homology CDS 17383 17799 . + 0 ID=cds-WP_001196530.1;Parent=gene-AD08_RS18465;Dbxref=Genbank:WP_001196530.1;Name=WP_001196530.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416194.1;locus_tag=AD08_RS18465;product=cysteine desulfuration protein SufE;protein_id=WP_001196530.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 17948 18952 . + . ID=gene-AD08_RS18460;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=AD08_RS18460;old_locus_tag=AD08_0745 NZ_JHDJ01000122.1 Protein Homology CDS 17948 18952 . + 0 ID=cds-WP_000817105.1;Parent=gene-AD08_RS18460;Dbxref=Genbank:WP_000817105.1;Name=WP_000817105.1;gbkey=CDS;gene=ldtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416193.1;locus_tag=AD08_RS18460;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817105.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 19016 19252 . - . ID=gene-AD08_RS18455;Name=AD08_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18455;old_locus_tag=AD08_0746 NZ_JHDJ01000122.1 Protein Homology CDS 19016 19252 . - 0 ID=cds-WP_000648420.1;Parent=gene-AD08_RS18455;Dbxref=Genbank:WP_000648420.1;Name=WP_000648420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006675846.1;locus_tag=AD08_RS18455;product=murein lipoprotein Lpp;protein_id=WP_000648420.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 19563 20975 . - . ID=gene-AD08_RS18450;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=AD08_RS18450;old_locus_tag=AD08_0747 NZ_JHDJ01000122.1 Protein Homology CDS 19563 20975 . - 0 ID=cds-WP_001467249.1;Parent=gene-AD08_RS18450;Dbxref=Genbank:WP_001467249.1;Name=WP_001467249.1;gbkey=CDS;gene=pykF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=AD08_RS18450;product=pyruvate kinase PykF;protein_id=WP_001467249.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 21532 21741 . + . ID=gene-AD08_RS18445;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=AD08_RS18445;old_locus_tag=AD08_0748 NZ_JHDJ01000122.1 Protein Homology CDS 21532 21741 . + 0 ID=cds-WP_000528342.1;Parent=gene-AD08_RS18445;Dbxref=Genbank:WP_000528342.1;Name=WP_000528342.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310409.1;locus_tag=AD08_RS18445;product=fumarate hydratase FumD;protein_id=WP_000528342.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 22196 22822 . + . ID=gene-AD08_RS18440;Name=AD08_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18440;old_locus_tag=AD08_0750 NZ_JHDJ01000122.1 Protein Homology CDS 22196 22822 . + 0 ID=cds-WP_001070230.1;Parent=gene-AD08_RS18440;Dbxref=Genbank:WP_001070230.1;Name=WP_001070230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310408.1;locus_tag=AD08_RS18440;product=ferredoxin-like protein;protein_id=WP_001070230.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 22843 24945 . + . ID=gene-AD08_RS18435;Name=AD08_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18435;old_locus_tag=AD08_0751 NZ_JHDJ01000122.1 Protein Homology CDS 22843 24945 . + 0 ID=cds-WP_001273527.1;Parent=gene-AD08_RS18435;Dbxref=Genbank:WP_001273527.1;Name=WP_001273527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416188.1;locus_tag=AD08_RS18435;product=aldehyde ferredoxin oxidoreductase;protein_id=WP_001273527.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 24958 25596 . + . ID=gene-AD08_RS18430;Name=AD08_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18430;old_locus_tag=AD08_0752 NZ_JHDJ01000122.1 Protein Homology CDS 24958 25596 . + 0 ID=cds-WP_032214098.1;Parent=gene-AD08_RS18430;Dbxref=Genbank:WP_032214098.1;Name=WP_032214098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707570.2;locus_tag=AD08_RS18430;product=YdhW family putative oxidoreductase system protein;protein_id=WP_032214098.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 25660 26328 . + . ID=gene-AD08_RS18425;Name=AD08_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18425;old_locus_tag=AD08_0753 NZ_JHDJ01000122.1 Protein Homology CDS 25660 26328 . + 0 ID=cds-WP_001310861.1;Parent=gene-AD08_RS18425;Dbxref=Genbank:WP_001310861.1;Name=WP_001310861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416186.4;locus_tag=AD08_RS18425;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001310861.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 26325 27110 . + . ID=gene-AD08_RS18420;Name=AD08_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18420;old_locus_tag=AD08_0754 NZ_JHDJ01000122.1 Protein Homology CDS 26325 27110 . + 0 ID=cds-WP_032218273.1;Parent=gene-AD08_RS18420;Dbxref=Genbank:WP_032218273.1;Name=WP_032218273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416185.1;locus_tag=AD08_RS18420;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_032218273.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 27114 27926 . + . ID=gene-AD08_RS18415;Name=AD08_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18415;old_locus_tag=AD08_0755 NZ_JHDJ01000122.1 Protein Homology CDS 27114 27926 . + 0 ID=cds-WP_000587525.1;Parent=gene-AD08_RS18415;Dbxref=Genbank:WP_000587525.1;Name=WP_000587525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416184.1;locus_tag=AD08_RS18415;product=hypothetical protein;protein_id=WP_000587525.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq pseudogene 27938 29542 . - . ID=gene-AD08_RS0125150;Name=AD08_RS0125150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125150;pseudo=true NZ_JHDJ01000122.1 Protein Homology CDS 27938 29542 . - 0 ID=cds-AD08_RS0125150;Parent=gene-AD08_RS0125150;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416183.1;locus_tag=AD08_RS0125150;product=FAD-NAD(P)-binding protein;pseudo=true;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 29668 29973 . - . ID=gene-AD08_RS18410;Name=AD08_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18410;old_locus_tag=AD08_0758 NZ_JHDJ01000122.1 Protein Homology CDS 29668 29973 . - 0 ID=cds-WP_000212657.1;Parent=gene-AD08_RS18410;Dbxref=Genbank:WP_000212657.1;Name=WP_000212657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416182.1;locus_tag=AD08_RS18410;product=monooxygenase;protein_id=WP_000212657.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 30081 30157 . - . ID=gene-AD08_RS18405;Name=AD08_RS18405;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18405;old_locus_tag=AD08_0759 NZ_JHDJ01000122.1 tRNAscan-SE tRNA 30081 30157 . - . ID=rna-AD08_RS18405;Parent=gene-AD08_RS18405;anticodon=(pos:complement(30121..30123));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18405;product=tRNA-Val NZ_JHDJ01000122.1 tRNAscan-SE exon 30081 30157 . - . ID=exon-AD08_RS18405-1;Parent=rna-AD08_RS18405;anticodon=(pos:complement(30121..30123));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18405;product=tRNA-Val NZ_JHDJ01000122.1 RefSeq gene 30162 30238 . - . ID=gene-AD08_RS18400;Name=AD08_RS18400;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18400;old_locus_tag=AD08_0760 NZ_JHDJ01000122.1 tRNAscan-SE tRNA 30162 30238 . - . ID=rna-AD08_RS18400;Parent=gene-AD08_RS18400;anticodon=(pos:complement(30202..30204));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18400;product=tRNA-Val NZ_JHDJ01000122.1 tRNAscan-SE exon 30162 30238 . - . ID=exon-AD08_RS18400-1;Parent=rna-AD08_RS18400;anticodon=(pos:complement(30202..30204));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18400;product=tRNA-Val NZ_JHDJ01000122.1 RefSeq gene 30546 31802 . + . ID=gene-AD08_RS18395;Name=AD08_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18395;old_locus_tag=AD08_0761 NZ_JHDJ01000122.1 Protein Homology CDS 30546 31802 . + 0 ID=cds-WP_000534271.1;Parent=gene-AD08_RS18395;Dbxref=Genbank:WP_000534271.1;Name=WP_000534271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416181.1;locus_tag=AD08_RS18395;product=autotransporter adhesin-related protein;protein_id=WP_000534271.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 31843 33216 . - . ID=gene-AD08_RS18390;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=AD08_RS18390;old_locus_tag=AD08_0762 NZ_JHDJ01000122.1 Protein Homology CDS 31843 33216 . - 0 ID=cds-WP_001174940.1;Parent=gene-AD08_RS18390;Dbxref=Genbank:WP_001174940.1;Name=WP_001174940.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025307.1;locus_tag=AD08_RS18390;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001174940.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 33431 34072 . + . ID=gene-AD08_RS18385;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=AD08_RS18385;old_locus_tag=AD08_0763 NZ_JHDJ01000122.1 Protein Homology CDS 33431 34072 . + 0 ID=cds-WP_000493947.1;Parent=gene-AD08_RS18385;Dbxref=Genbank:WP_000493947.1;Name=WP_000493947.1;gbkey=CDS;gene=ribE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416179.1;locus_tag=AD08_RS18385;product=riboflavin synthase;protein_id=WP_000493947.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 34112 35260 . - . ID=gene-AD08_RS18380;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=AD08_RS18380;old_locus_tag=AD08_0764 NZ_JHDJ01000122.1 Protein Homology CDS 34112 35260 . - 0 ID=cds-WP_000098896.1;Parent=gene-AD08_RS18380;Dbxref=Genbank:WP_000098896.1;Name=WP_000098896.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416178.1;locus_tag=AD08_RS18380;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098896.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 35551 36762 . - . ID=gene-AD08_RS18375;Name=AD08_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18375;old_locus_tag=AD08_0765 NZ_JHDJ01000122.1 Protein Homology CDS 35551 36762 . - 0 ID=cds-WP_001182363.1-2;Parent=gene-AD08_RS18375;Dbxref=Genbank:WP_001182363.1;Name=WP_001182363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AD08_RS18375;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_001182363.1;transl_table=11 NZ_JHDJ01000122.1 RefSeq gene 36875 37007 . + . ID=gene-AD08_RS18370;Name=AD08_RS18370;end_range=37007,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18370;old_locus_tag=AD08_0766;partial=true NZ_JHDJ01000122.1 Protein Homology CDS 36875 37007 . + 0 ID=cds-WP_001322164.1;Parent=gene-AD08_RS18370;Dbxref=Genbank:WP_001322164.1;Name=WP_001322164.1;end_range=37007,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310395.1;locus_tag=AD08_RS18370;partial=true;product=LysR family transcriptional regulator;protein_id=WP_001322164.1;transl_table=11 ##sequence-region NZ_JHDJ01000123.1 1 1795 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000123.1 RefSeq region 1 1795 . + . ID=NZ_JHDJ01000123.1:1..1795;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000123.1 RefSeq pseudogene 1 183 . + . ID=gene-AD08_RS31605;Name=AD08_RS31605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31605;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000123.1 Protein Homology CDS 1 183 . + 1 ID=cds-AD08_RS31605;Parent=gene-AD08_RS31605;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001426929.1;locus_tag=AD08_RS31605;partial=true;product=RHS repeat protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000123.1 RefSeq gene 266 1063 . + . ID=gene-AD08_RS0125155;Name=AD08_RS0125155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125155 NZ_JHDJ01000123.1 Protein Homology CDS 266 1063 . + 0 ID=cds-WP_071524914.1;Parent=gene-AD08_RS0125155;Dbxref=Genbank:WP_071524914.1;Name=WP_071524914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687585.1;locus_tag=AD08_RS0125155;product=RHS repeat protein;protein_id=WP_071524914.1;transl_table=11 NZ_JHDJ01000123.1 RefSeq gene 1063 1389 . + . ID=gene-AD08_RS0125160;Name=AD08_RS0125160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125160 NZ_JHDJ01000123.1 Protein Homology CDS 1063 1389 . + 0 ID=cds-WP_000873944.1;Parent=gene-AD08_RS0125160;Dbxref=Genbank:WP_000873944.1;Name=WP_000873944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415230.1;locus_tag=AD08_RS0125160;product=hypothetical protein;protein_id=WP_000873944.1;transl_table=11 NZ_JHDJ01000123.1 RefSeq pseudogene 1435 1795 . + . ID=gene-AD08_RS18365;Name=AD08_RS18365;end_range=1795,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS18365;old_locus_tag=AD08_0768;partial=true;pseudo=true;start_range=.,1435 NZ_JHDJ01000123.1 Protein Homology CDS 1435 1795 . + 0 ID=cds-AD08_RS18365;Parent=gene-AD08_RS18365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1795,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308756.1;locus_tag=AD08_RS18365;partial=true;product=RHS repeat protein;pseudo=true;start_range=.,1435;transl_table=11 ##sequence-region NZ_JHDJ01000124.1 1 52254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000124.1 RefSeq region 1 52254 . + . ID=NZ_JHDJ01000124.1:1..52254;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000124.1 RefSeq pseudogene 1 322 . - . ID=gene-AD08_RS0125165;Name=AD08_RS0125165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125165;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000124.1 Protein Homology CDS 1 322 . - 0 ID=cds-AD08_RS0125165;Parent=gene-AD08_RS0125165;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS0125165;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 426 944 . + . ID=gene-AD08_RS18360;Name=AD08_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18360;old_locus_tag=AD08_0770 NZ_JHDJ01000124.1 Protein Homology CDS 426 944 . + 0 ID=cds-WP_001142958.1;Parent=gene-AD08_RS18360;Dbxref=Genbank:WP_001142958.1;Name=WP_001142958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308261.1;locus_tag=AD08_RS18360;product=Hcp family type VI secretion system effector;protein_id=WP_001142958.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 1154 3295 . + . ID=gene-AD08_RS18350;Name=AD08_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18350;old_locus_tag=AD08_0772 NZ_JHDJ01000124.1 Protein Homology CDS 1154 3295 . + 0 ID=cds-WP_032218286.1;Parent=gene-AD08_RS18350;Dbxref=Genbank:WP_032218286.1;Name=WP_032218286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308263.1;locus_tag=AD08_RS18350;product=type VI secretion system tip protein VgrG;protein_id=WP_032218286.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 3371 7615 . + . ID=gene-AD08_RS18345;Name=AD08_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18345;old_locus_tag=AD08_0773 NZ_JHDJ01000124.1 Protein Homology CDS 3371 7615 . + 0 ID=cds-WP_032218289.1;Parent=gene-AD08_RS18345;Dbxref=Genbank:WP_032218289.1;Name=WP_032218289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000508720.1;locus_tag=AD08_RS18345;product=RHS repeat protein;protein_id=WP_032218289.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 7593 7985 . + . ID=gene-AD08_RS0125170;Name=AD08_RS0125170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125170 NZ_JHDJ01000124.1 Protein Homology CDS 7593 7985 . + 0 ID=cds-WP_001101839.1;Parent=gene-AD08_RS0125170;Dbxref=Genbank:WP_001101839.1;Name=WP_001101839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101839.1;locus_tag=AD08_RS0125170;product=hypothetical protein;protein_id=WP_001101839.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq pseudogene 8416 9174 . + . ID=gene-AD08_RS18340;Name=AD08_RS18340;end_range=9174,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS18340;old_locus_tag=AD08_0775;partial=true;pseudo=true NZ_JHDJ01000124.1 Protein Homology CDS 8416 9174 . + 0 ID=cds-AD08_RS18340;Parent=gene-AD08_RS18340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=9174,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD08_RS18340;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 9325 9834 . + . ID=gene-AD08_RS18335;Name=AD08_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18335;old_locus_tag=AD08_0776 NZ_JHDJ01000124.1 Protein Homology CDS 9325 9834 . + 0 ID=cds-WP_001053305.1;Parent=gene-AD08_RS18335;Dbxref=Genbank:WP_001053305.1;Name=WP_001053305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415235.1;locus_tag=AD08_RS18335;product=YbgA family protein;protein_id=WP_001053305.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq pseudogene 9831 11235 . + . ID=gene-AD08_RS18330;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=pseudogene;locus_tag=AD08_RS18330;old_locus_tag=AD08_0777;pseudo=true NZ_JHDJ01000124.1 Protein Homology CDS 9831 11235 . + 0 ID=cds-AD08_RS18330;Parent=gene-AD08_RS18330;Note=frameshifted;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415236.1;locus_tag=AD08_RS18330;product=deoxyribodipyrimidine photo-lyase;pseudo=true;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 11385 12866 . - . ID=gene-AD08_RS18325;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=AD08_RS18325;old_locus_tag=AD08_0779 NZ_JHDJ01000124.1 Protein Homology CDS 11385 12866 . - 0 ID=cds-WP_001032689.1;Parent=gene-AD08_RS18325;Dbxref=Genbank:WP_001032689.1;Name=WP_001032689.1;gbkey=CDS;gene=dtpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415237.1;locus_tag=AD08_RS18325;product=dipeptide permease DtpD;protein_id=WP_001032689.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 13137 13880 . + . ID=gene-AD08_RS18320;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=AD08_RS18320;old_locus_tag=AD08_0780 NZ_JHDJ01000124.1 Protein Homology CDS 13137 13880 . + 0 ID=cds-WP_000798871.1;Parent=gene-AD08_RS18320;Dbxref=Genbank:WP_000798871.1;Name=WP_000798871.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=AD08_RS18320;product=radiation resistance protein YbgI;protein_id=WP_000798871.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 13903 14559 . + . ID=gene-AD08_RS18315;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=AD08_RS18315;old_locus_tag=AD08_0781 NZ_JHDJ01000124.1 Protein Homology CDS 13903 14559 . + 0 ID=cds-WP_001188343.1;Parent=gene-AD08_RS18315;Dbxref=Genbank:WP_001188343.1;Name=WP_001188343.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308763.1;locus_tag=AD08_RS18315;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188343.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 14553 15485 . + . ID=gene-AD08_RS18310;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=AD08_RS18310;old_locus_tag=AD08_0782 NZ_JHDJ01000124.1 Protein Homology CDS 14553 15485 . + 0 ID=cds-WP_000912724.1;Parent=gene-AD08_RS18310;Dbxref=Genbank:WP_000912724.1;Name=WP_000912724.1;gbkey=CDS;gene=pxpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415240.1;locus_tag=AD08_RS18310;product=5-oxoprolinase subunit PxpC;protein_id=WP_000912724.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 15475 16209 . + . ID=gene-AD08_RS18305;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=AD08_RS18305;old_locus_tag=AD08_0783 NZ_JHDJ01000124.1 Protein Homology CDS 15475 16209 . + 0 ID=cds-WP_000687112.1;Parent=gene-AD08_RS18305;Dbxref=Genbank:WP_000687112.1;Name=WP_000687112.1;gbkey=CDS;gene=pxpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415241.1;locus_tag=AD08_RS18305;product=5-oxoprolinase subunit PxpA;protein_id=WP_000687112.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 16245 17036 . + . ID=gene-AD08_RS18300;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=AD08_RS18300;old_locus_tag=AD08_0784 NZ_JHDJ01000124.1 Protein Homology CDS 16245 17036 . + 0 ID=cds-WP_032218292.1;Parent=gene-AD08_RS18300;Dbxref=Genbank:WP_032218292.1;Name=WP_032218292.1;gbkey=CDS;gene=nei;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415242.1;locus_tag=AD08_RS18300;product=endonuclease VIII;protein_id=WP_032218292.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 17033 18079 . - . ID=gene-AD08_RS18295;Name=AD08_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18295;old_locus_tag=AD08_0785 NZ_JHDJ01000124.1 Protein Homology CDS 17033 18079 . - 0 ID=cds-WP_001336221.1;Parent=gene-AD08_RS18295;Dbxref=Genbank:WP_001336221.1;Name=WP_001336221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415243.4;locus_tag=AD08_RS18295;product=AbrB family transcriptional regulator;protein_id=WP_001336221.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 18231 19292 . - . ID=gene-AD08_RS18290;Name=AD08_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18290;old_locus_tag=AD08_0786 NZ_JHDJ01000124.1 Protein Homology CDS 18231 19292 . - 0 ID=cds-WP_001272410.1;Parent=gene-AD08_RS18290;Dbxref=Genbank:WP_001272410.1;Name=WP_001272410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415244.4;locus_tag=AD08_RS18290;product=fimbrial protein;protein_id=WP_001272410.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 19289 20017 . - . ID=gene-AD08_RS18285;Name=AD08_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18285;old_locus_tag=AD08_0787 NZ_JHDJ01000124.1 Protein Homology CDS 19289 20017 . - 0 ID=cds-WP_000142799.1;Parent=gene-AD08_RS18285;Dbxref=Genbank:WP_000142799.1;Name=WP_000142799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415245.1;locus_tag=AD08_RS18285;product=molecular chaperone;protein_id=WP_000142799.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 20032 22488 . - . ID=gene-AD08_RS18280;Name=AD08_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18280;old_locus_tag=AD08_0788 NZ_JHDJ01000124.1 Protein Homology CDS 20032 22488 . - 0 ID=cds-WP_001310647.1;Parent=gene-AD08_RS18280;Dbxref=Genbank:WP_001310647.1;Name=WP_001310647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706516.2;locus_tag=AD08_RS18280;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_001310647.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 22539 23105 . - . ID=gene-AD08_RS18275;Name=AD08_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18275;old_locus_tag=AD08_0789 NZ_JHDJ01000124.1 Protein Homology CDS 22539 23105 . - 0 ID=cds-WP_000472412.1;Parent=gene-AD08_RS18275;Dbxref=Genbank:WP_000472412.1;Name=WP_000472412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415247.1;locus_tag=AD08_RS18275;product=type 1 fimbrial protein;protein_id=WP_000472412.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 23495 24778 . - . ID=gene-AD08_RS18270;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=AD08_RS18270;old_locus_tag=AD08_0790 NZ_JHDJ01000124.1 Protein Homology CDS 23495 24778 . - 0 ID=cds-WP_000785834.1;Parent=gene-AD08_RS18270;Dbxref=Genbank:WP_000785834.1;Name=WP_000785834.1;gbkey=CDS;gene=gltA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415248.1;locus_tag=AD08_RS18270;product=citrate (Si)-synthase;protein_id=WP_000785834.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 24984 25091 . - . ID=gene-AD08_RS31610;Name=AD08_RS31610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31610 NZ_JHDJ01000124.1 Protein Homology CDS 24984 25091 . - 0 ID=cds-WP_001305582.1;Parent=gene-AD08_RS31610;Dbxref=Genbank:WP_001305582.1;Name=WP_001305582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518759.1;locus_tag=AD08_RS31610;product=hypothetical protein;protein_id=WP_001305582.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 25472 25876 . + . ID=gene-AD08_RS0125180;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=AD08_RS0125180 NZ_JHDJ01000124.1 Protein Homology CDS 25472 25876 . + 0 ID=cds-WP_000263347.1;Parent=gene-AD08_RS0125180;Dbxref=Genbank:WP_000263347.1;Name=WP_000263347.1;gbkey=CDS;gene=sdhC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=AD08_RS0125180;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263347.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 25870 26217 . + . ID=gene-AD08_RS18265;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=AD08_RS18265;old_locus_tag=AD08_0792 NZ_JHDJ01000124.1 Protein Homology CDS 25870 26217 . + 0 ID=cds-WP_000254365.1;Parent=gene-AD08_RS18265;Dbxref=Genbank:WP_000254365.1;Name=WP_000254365.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415250.1;locus_tag=AD08_RS18265;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254365.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 26217 27983 . + . ID=gene-AD08_RS18260;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=AD08_RS18260;old_locus_tag=AD08_0793 NZ_JHDJ01000124.1 Protein Homology CDS 26217 27983 . + 0 ID=cds-WP_000775540.1;Parent=gene-AD08_RS18260;Dbxref=Genbank:WP_000775540.1;Name=WP_000775540.1;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=AD08_RS18260;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775540.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 27999 28715 . + . ID=gene-AD08_RS18255;Name=AD08_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18255;old_locus_tag=AD08_0794 NZ_JHDJ01000124.1 Protein Homology CDS 27999 28715 . + 0 ID=cds-WP_001235254.1;Parent=gene-AD08_RS18255;Dbxref=Genbank:WP_001235254.1;Name=WP_001235254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=AD08_RS18255;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001235254.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 29016 31817 . + . ID=gene-AD08_RS18250;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=AD08_RS18250;old_locus_tag=AD08_0796 NZ_JHDJ01000124.1 Protein Homology CDS 29016 31817 . + 0 ID=cds-WP_001181473.1;Parent=gene-AD08_RS18250;Dbxref=Genbank:WP_001181473.1;Name=WP_001181473.1;gbkey=CDS;gene=sucA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308778.1;locus_tag=AD08_RS18250;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181473.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 31832 33049 . + . ID=gene-AD08_RS18245;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=AD08_RS18245;old_locus_tag=AD08_0797 NZ_JHDJ01000124.1 Protein Homology CDS 31832 33049 . + 0 ID=cds-WP_000099823.1;Parent=gene-AD08_RS18245;Dbxref=Genbank:WP_000099823.1;Name=WP_000099823.1;gbkey=CDS;gene=odhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308779.1;locus_tag=AD08_RS18245;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099823.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 33415 34581 . + . ID=gene-AD08_RS18240;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=AD08_RS18240;old_locus_tag=AD08_0798 NZ_JHDJ01000124.1 Protein Homology CDS 33415 34581 . + 0 ID=cds-WP_001048602.1;Parent=gene-AD08_RS18240;Dbxref=Genbank:WP_001048602.1;Name=WP_001048602.1;gbkey=CDS;gene=sucC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=AD08_RS18240;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048602.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 34581 35450 . + . ID=gene-AD08_RS18235;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=AD08_RS18235;old_locus_tag=AD08_0799 NZ_JHDJ01000124.1 Protein Homology CDS 34581 35450 . + 0 ID=cds-WP_000025458.1;Parent=gene-AD08_RS18235;Dbxref=Genbank:WP_000025458.1;Name=WP_000025458.1;gbkey=CDS;gene=sucD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308781.1;locus_tag=AD08_RS18235;product=succinate--CoA ligase subunit alpha;protein_id=WP_000025458.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 35554 36276 . - . ID=gene-AD08_RS18230;Name=mngR;gbkey=Gene;gene=mngR;gene_biotype=protein_coding;locus_tag=AD08_RS18230;old_locus_tag=AD08_0800 NZ_JHDJ01000124.1 Protein Homology CDS 35554 36276 . - 0 ID=cds-WP_000509902.1;Parent=gene-AD08_RS18230;Dbxref=Genbank:WP_000509902.1;Name=WP_000509902.1;gbkey=CDS;gene=mngR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415258.1;locus_tag=AD08_RS18230;product=mannosyl-D-glycerate transport/metabolism system transcriptional repressor MngR;protein_id=WP_000509902.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 36385 38361 . + . ID=gene-AD08_RS18225;Name=mngA;gbkey=Gene;gene=mngA;gene_biotype=protein_coding;locus_tag=AD08_RS18225;old_locus_tag=AD08_0801 NZ_JHDJ01000124.1 Protein Homology CDS 36385 38361 . + 0 ID=cds-WP_000242633.1;Parent=gene-AD08_RS18225;Dbxref=Genbank:WP_000242633.1;Name=WP_000242633.1;gbkey=CDS;gene=mngA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415259.1;locus_tag=AD08_RS18225;product=PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC;protein_id=WP_000242633.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 38379 41012 . + . ID=gene-AD08_RS18220;Name=mngB;gbkey=Gene;gene=mngB;gene_biotype=protein_coding;locus_tag=AD08_RS18220;old_locus_tag=AD08_0802 NZ_JHDJ01000124.1 Protein Homology CDS 38379 41012 . + 0 ID=cds-WP_032218296.1;Parent=gene-AD08_RS18220;Dbxref=Genbank:WP_032218296.1;Name=WP_032218296.1;gbkey=CDS;gene=mngB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415260.1;locus_tag=AD08_RS18220;product=mannosylglycerate hydrolase;protein_id=WP_032218296.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 41859 43427 . + . ID=gene-AD08_RS18210;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=AD08_RS18210;old_locus_tag=AD08_0804 NZ_JHDJ01000124.1 Protein Homology CDS 41859 43427 . + 0 ID=cds-WP_000884361.1;Parent=gene-AD08_RS18210;Dbxref=Genbank:WP_000884361.1;Name=WP_000884361.1;gbkey=CDS;gene=cydA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125442.1;locus_tag=AD08_RS18210;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884361.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 43443 44582 . + . ID=gene-AD08_RS18205;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=AD08_RS18205;old_locus_tag=AD08_0805 NZ_JHDJ01000124.1 Protein Homology CDS 43443 44582 . + 0 ID=cds-WP_000568275.1;Parent=gene-AD08_RS18205;Dbxref=Genbank:WP_000568275.1;Name=WP_000568275.1;gbkey=CDS;gene=cydB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=AD08_RS18205;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568275.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 44597 44710 . + . ID=gene-AD08_RS18200;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=AD08_RS18200;old_locus_tag=AD08_0806 NZ_JHDJ01000124.1 Protein Homology CDS 44597 44710 . + 0 ID=cds-WP_000270282.1;Parent=gene-AD08_RS18200;Dbxref=Genbank:WP_000270282.1;Name=WP_000270282.1;gbkey=CDS;gene=cydX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588444.1;locus_tag=AD08_RS18200;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270282.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 44710 45003 . + . ID=gene-AD08_RS18195;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=AD08_RS18195;old_locus_tag=AD08_0807 NZ_JHDJ01000124.1 Protein Homology CDS 44710 45003 . + 0 ID=cds-WP_000034602.1;Parent=gene-AD08_RS18195;Dbxref=Genbank:WP_000034602.1;Name=WP_000034602.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308797.1;locus_tag=AD08_RS18195;product=cyd operon protein YbgE;protein_id=WP_000034602.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 45153 45557 . + . ID=gene-AD08_RS18190;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=AD08_RS18190;old_locus_tag=AD08_0808 NZ_JHDJ01000124.1 Protein Homology CDS 45153 45557 . + 0 ID=cds-WP_001098384.1;Parent=gene-AD08_RS18190;Dbxref=Genbank:WP_001098384.1;Name=WP_001098384.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308798.1;locus_tag=AD08_RS18190;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001098384.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 45554 46246 . + . ID=gene-AD08_RS18185;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=AD08_RS18185;old_locus_tag=AD08_0809 NZ_JHDJ01000124.1 Protein Homology CDS 45554 46246 . + 0 ID=cds-WP_000131314.1;Parent=gene-AD08_RS18185;Dbxref=Genbank:WP_000131314.1;Name=WP_000131314.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308799.1;locus_tag=AD08_RS18185;product=Tol-Pal system protein TolQ;protein_id=WP_000131314.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 46250 46678 . + . ID=gene-AD08_RS18180;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=AD08_RS18180;old_locus_tag=AD08_0810 NZ_JHDJ01000124.1 Protein Homology CDS 46250 46678 . + 0 ID=cds-WP_000090097.1;Parent=gene-AD08_RS18180;Dbxref=Genbank:WP_000090097.1;Name=WP_000090097.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=AD08_RS18180;product=colicin uptake protein TolR;protein_id=WP_000090097.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 46743 48008 . + . ID=gene-AD08_RS18175;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=AD08_RS18175;old_locus_tag=AD08_0811 NZ_JHDJ01000124.1 Protein Homology CDS 46743 48008 . + 0 ID=cds-WP_000030637.1;Parent=gene-AD08_RS18175;Dbxref=Genbank:WP_000030637.1;Name=WP_000030637.1;gbkey=CDS;gene=tolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415267.1;locus_tag=AD08_RS18175;product=cell envelope integrity protein TolA;protein_id=WP_000030637.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 48141 49433 . + . ID=gene-AD08_RS18170;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=AD08_RS18170;old_locus_tag=AD08_0812 NZ_JHDJ01000124.1 Protein Homology CDS 48141 49433 . + 0 ID=cds-WP_001295307.1;Parent=gene-AD08_RS18170;Dbxref=Genbank:WP_001295307.1;Name=WP_001295307.1;gbkey=CDS;gene=tolB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=AD08_RS18170;product=Tol-Pal system protein TolB;protein_id=WP_001295307.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 49468 49989 . + . ID=gene-AD08_RS18165;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=AD08_RS18165;old_locus_tag=AD08_0813 NZ_JHDJ01000124.1 Protein Homology CDS 49468 49989 . + 0 ID=cds-WP_001295306.1;Parent=gene-AD08_RS18165;Dbxref=Genbank:WP_001295306.1;Name=WP_001295306.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308803.1;locus_tag=AD08_RS18165;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001295306.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 49999 50790 . + . ID=gene-AD08_RS18160;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=AD08_RS18160;old_locus_tag=AD08_0814 NZ_JHDJ01000124.1 Protein Homology CDS 49999 50790 . + 0 ID=cds-WP_000097571.1;Parent=gene-AD08_RS18160;Dbxref=Genbank:WP_000097571.1;Name=WP_000097571.1;gbkey=CDS;gene=cpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415270.1;locus_tag=AD08_RS18160;product=cell division protein CpoB;protein_id=WP_000097571.1;transl_table=11 NZ_JHDJ01000124.1 RefSeq gene 50955 51030 . + . ID=gene-AD08_RS18155;Name=AD08_RS18155;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18155;old_locus_tag=AD08_0815 NZ_JHDJ01000124.1 tRNAscan-SE tRNA 50955 51030 . + . ID=rna-AD08_RS18155;Parent=gene-AD08_RS18155;anticodon=(pos:50988..50990);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18155;product=tRNA-Lys NZ_JHDJ01000124.1 tRNAscan-SE exon 50955 51030 . + . ID=exon-AD08_RS18155-1;Parent=rna-AD08_RS18155;anticodon=(pos:50988..50990);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18155;product=tRNA-Lys NZ_JHDJ01000124.1 RefSeq gene 51166 51241 . + . ID=gene-AD08_RS18150;Name=AD08_RS18150;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18150;old_locus_tag=AD08_0816 NZ_JHDJ01000124.1 tRNAscan-SE tRNA 51166 51241 . + . ID=rna-AD08_RS18150;Parent=gene-AD08_RS18150;anticodon=(pos:51199..51201);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18150;product=tRNA-Val NZ_JHDJ01000124.1 tRNAscan-SE exon 51166 51241 . + . ID=exon-AD08_RS18150-1;Parent=rna-AD08_RS18150;anticodon=(pos:51199..51201);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18150;product=tRNA-Val NZ_JHDJ01000124.1 RefSeq gene 51244 51319 . + . ID=gene-AD08_RS18145;Name=AD08_RS18145;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18145;old_locus_tag=AD08_0817 NZ_JHDJ01000124.1 tRNAscan-SE tRNA 51244 51319 . + . ID=rna-AD08_RS18145;Parent=gene-AD08_RS18145;anticodon=(pos:51277..51279);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18145;product=tRNA-Lys NZ_JHDJ01000124.1 tRNAscan-SE exon 51244 51319 . + . ID=exon-AD08_RS18145-1;Parent=rna-AD08_RS18145;anticodon=(pos:51277..51279);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18145;product=tRNA-Lys NZ_JHDJ01000124.1 RefSeq gene 51469 51544 . + . ID=gene-AD08_RS18140;Name=AD08_RS18140;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18140;old_locus_tag=AD08_0818 NZ_JHDJ01000124.1 tRNAscan-SE tRNA 51469 51544 . + . ID=rna-AD08_RS18140;Parent=gene-AD08_RS18140;anticodon=(pos:51502..51504);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18140;product=tRNA-Val NZ_JHDJ01000124.1 tRNAscan-SE exon 51469 51544 . + . ID=exon-AD08_RS18140-1;Parent=rna-AD08_RS18140;anticodon=(pos:51502..51504);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18140;product=tRNA-Val NZ_JHDJ01000124.1 RefSeq gene 51547 51622 . + . ID=gene-AD08_RS18135;Name=AD08_RS18135;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18135;old_locus_tag=AD08_0819 NZ_JHDJ01000124.1 tRNAscan-SE tRNA 51547 51622 . + . ID=rna-AD08_RS18135;Parent=gene-AD08_RS18135;anticodon=(pos:51580..51582);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18135;product=tRNA-Lys NZ_JHDJ01000124.1 tRNAscan-SE exon 51547 51622 . + . ID=exon-AD08_RS18135-1;Parent=rna-AD08_RS18135;anticodon=(pos:51580..51582);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18135;product=tRNA-Lys NZ_JHDJ01000124.1 RefSeq gene 51769 51844 . + . ID=gene-AD08_RS18130;Name=AD08_RS18130;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18130;old_locus_tag=AD08_0820 NZ_JHDJ01000124.1 tRNAscan-SE tRNA 51769 51844 . + . ID=rna-AD08_RS18130;Parent=gene-AD08_RS18130;anticodon=(pos:51802..51804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18130;product=tRNA-Lys NZ_JHDJ01000124.1 tRNAscan-SE exon 51769 51844 . + . ID=exon-AD08_RS18130-1;Parent=rna-AD08_RS18130;anticodon=(pos:51802..51804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18130;product=tRNA-Lys NZ_JHDJ01000124.1 RefSeq gene 51991 52066 . + . ID=gene-AD08_RS18125;Name=AD08_RS18125;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18125;old_locus_tag=AD08_0821 NZ_JHDJ01000124.1 tRNAscan-SE tRNA 51991 52066 . + . ID=rna-AD08_RS18125;Parent=gene-AD08_RS18125;anticodon=(pos:52024..52026);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18125;product=tRNA-Lys NZ_JHDJ01000124.1 tRNAscan-SE exon 51991 52066 . + . ID=exon-AD08_RS18125-1;Parent=rna-AD08_RS18125;anticodon=(pos:52024..52026);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18125;product=tRNA-Lys ##sequence-region NZ_JHDJ01000125.1 1 2028 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000125.1 RefSeq region 1 2028 . + . ID=NZ_JHDJ01000125.1:1..2028;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000125.1 RefSeq gene 749 1324 . - . ID=gene-AD08_RS18120;Name=AD08_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18120;old_locus_tag=AD08_0823 NZ_JHDJ01000125.1 Protein Homology CDS 749 1324 . - 0 ID=cds-WP_021565058.1;Parent=gene-AD08_RS18120;Dbxref=Genbank:WP_021565058.1;Name=WP_021565058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556902.1;locus_tag=AD08_RS18120;product=DUF4376 domain-containing protein;protein_id=WP_021565058.1;transl_table=11 NZ_JHDJ01000125.1 RefSeq pseudogene 1598 2028 . - . ID=gene-AD08_RS18115;Name=AD08_RS18115;end_range=2028,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS18115;old_locus_tag=AD08_0824;partial=true;pseudo=true NZ_JHDJ01000125.1 Protein Homology CDS 1598 2028 . - 2 ID=cds-AD08_RS18115;Parent=gene-AD08_RS18115;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2028,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS18115;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000126.1 1 2558 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000126.1 RefSeq region 1 2558 . + . ID=NZ_JHDJ01000126.1:1..2558;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000126.1 RefSeq pseudogene 1 320 . + . ID=gene-AD08_RS18110;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=pseudogene;locus_tag=AD08_RS18110;old_locus_tag=AD08_0825;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000126.1 Protein Homology CDS 1 320 . + 2 ID=cds-AD08_RS18110;Parent=gene-AD08_RS18110;Note=forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=tolB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=AD08_RS18110;partial=true;product=Tol-Pal system protein TolB;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000126.1 RefSeq gene 355 876 . + . ID=gene-AD08_RS18105;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=AD08_RS18105;old_locus_tag=AD08_0826 NZ_JHDJ01000126.1 Protein Homology CDS 355 876 . + 0 ID=cds-WP_001295306.1-2;Parent=gene-AD08_RS18105;Dbxref=Genbank:WP_001295306.1;Name=WP_001295306.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308803.1;locus_tag=AD08_RS18105;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001295306.1;transl_table=11 NZ_JHDJ01000126.1 RefSeq gene 886 1677 . + . ID=gene-AD08_RS18100;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=AD08_RS18100;old_locus_tag=AD08_0827 NZ_JHDJ01000126.1 Protein Homology CDS 886 1677 . + 0 ID=cds-WP_000097571.1-2;Parent=gene-AD08_RS18100;Dbxref=Genbank:WP_000097571.1;Name=WP_000097571.1;gbkey=CDS;gene=cpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415270.1;locus_tag=AD08_RS18100;product=cell division protein CpoB;protein_id=WP_000097571.1;transl_table=11 NZ_JHDJ01000126.1 RefSeq gene 1842 1917 . + . ID=gene-AD08_RS18095;Name=AD08_RS18095;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18095;old_locus_tag=AD08_0828 NZ_JHDJ01000126.1 tRNAscan-SE tRNA 1842 1917 . + . ID=rna-AD08_RS18095;Parent=gene-AD08_RS18095;anticodon=(pos:1875..1877);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18095;product=tRNA-Lys NZ_JHDJ01000126.1 tRNAscan-SE exon 1842 1917 . + . ID=exon-AD08_RS18095-1;Parent=rna-AD08_RS18095;anticodon=(pos:1875..1877);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18095;product=tRNA-Lys NZ_JHDJ01000126.1 RefSeq gene 2067 2142 . + . ID=gene-AD08_RS18090;Name=AD08_RS18090;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18090;old_locus_tag=AD08_0829 NZ_JHDJ01000126.1 tRNAscan-SE tRNA 2067 2142 . + . ID=rna-AD08_RS18090;Parent=gene-AD08_RS18090;anticodon=(pos:2100..2102);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18090;product=tRNA-Val NZ_JHDJ01000126.1 tRNAscan-SE exon 2067 2142 . + . ID=exon-AD08_RS18090-1;Parent=rna-AD08_RS18090;anticodon=(pos:2100..2102);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18090;product=tRNA-Val NZ_JHDJ01000126.1 RefSeq gene 2189 2264 . + . ID=gene-AD08_RS18085;Name=AD08_RS18085;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18085;old_locus_tag=AD08_0830 NZ_JHDJ01000126.1 tRNAscan-SE tRNA 2189 2264 . + . ID=rna-AD08_RS18085;Parent=gene-AD08_RS18085;anticodon=(pos:2222..2224);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18085;product=tRNA-Val NZ_JHDJ01000126.1 tRNAscan-SE exon 2189 2264 . + . ID=exon-AD08_RS18085-1;Parent=rna-AD08_RS18085;anticodon=(pos:2222..2224);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18085;product=tRNA-Val NZ_JHDJ01000126.1 RefSeq gene 2268 2343 . + . ID=gene-AD08_RS18080;Name=AD08_RS18080;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18080;old_locus_tag=AD08_0831 NZ_JHDJ01000126.1 tRNAscan-SE tRNA 2268 2343 . + . ID=rna-AD08_RS18080;Parent=gene-AD08_RS18080;anticodon=(pos:2301..2303);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18080;product=tRNA-Lys NZ_JHDJ01000126.1 tRNAscan-SE exon 2268 2343 . + . ID=exon-AD08_RS18080-1;Parent=rna-AD08_RS18080;anticodon=(pos:2301..2303);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18080;product=tRNA-Lys ##sequence-region NZ_JHDJ01000127.1 1 42339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000127.1 RefSeq region 1 42339 . + . ID=NZ_JHDJ01000127.1:1..42339;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000127.1 RefSeq gene 38 113 . + . ID=gene-AD08_RS18070;Name=AD08_RS18070;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18070;old_locus_tag=AD08_0833 NZ_JHDJ01000127.1 tRNAscan-SE tRNA 38 113 . + . ID=rna-AD08_RS18070;Parent=gene-AD08_RS18070;anticodon=(pos:71..73);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18070;product=tRNA-Val NZ_JHDJ01000127.1 tRNAscan-SE exon 38 113 . + . ID=exon-AD08_RS18070-1;Parent=rna-AD08_RS18070;anticodon=(pos:71..73);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18070;product=tRNA-Val NZ_JHDJ01000127.1 RefSeq gene 160 235 . + . ID=gene-AD08_RS18065;Name=AD08_RS18065;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18065;old_locus_tag=AD08_0834 NZ_JHDJ01000127.1 tRNAscan-SE tRNA 160 235 . + . ID=rna-AD08_RS18065;Parent=gene-AD08_RS18065;anticodon=(pos:193..195);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18065;product=tRNA-Val NZ_JHDJ01000127.1 tRNAscan-SE exon 160 235 . + . ID=exon-AD08_RS18065-1;Parent=rna-AD08_RS18065;anticodon=(pos:193..195);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18065;product=tRNA-Val NZ_JHDJ01000127.1 RefSeq gene 238 313 . + . ID=gene-AD08_RS18060;Name=AD08_RS18060;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18060;old_locus_tag=AD08_0835 NZ_JHDJ01000127.1 tRNAscan-SE tRNA 238 313 . + . ID=rna-AD08_RS18060;Parent=gene-AD08_RS18060;anticodon=(pos:271..273);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18060;product=tRNA-Lys NZ_JHDJ01000127.1 tRNAscan-SE exon 238 313 . + . ID=exon-AD08_RS18060-1;Parent=rna-AD08_RS18060;anticodon=(pos:271..273);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18060;product=tRNA-Lys NZ_JHDJ01000127.1 RefSeq gene 461 536 . + . ID=gene-AD08_RS18055;Name=AD08_RS18055;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18055;old_locus_tag=AD08_0836 NZ_JHDJ01000127.1 tRNAscan-SE tRNA 461 536 . + . ID=rna-AD08_RS18055;Parent=gene-AD08_RS18055;anticodon=(pos:494..496);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18055;product=tRNA-Lys NZ_JHDJ01000127.1 tRNAscan-SE exon 461 536 . + . ID=exon-AD08_RS18055-1;Parent=rna-AD08_RS18055;anticodon=(pos:494..496);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18055;product=tRNA-Lys NZ_JHDJ01000127.1 RefSeq gene 667 742 . + . ID=gene-AD08_RS18050;Name=AD08_RS18050;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18050;old_locus_tag=AD08_0838 NZ_JHDJ01000127.1 tRNAscan-SE tRNA 667 742 . + . ID=rna-AD08_RS18050;Parent=gene-AD08_RS18050;anticodon=(pos:700..702);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18050;product=tRNA-Lys NZ_JHDJ01000127.1 tRNAscan-SE exon 667 742 . + . ID=exon-AD08_RS18050-1;Parent=rna-AD08_RS18050;anticodon=(pos:700..702);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18050;product=tRNA-Lys NZ_JHDJ01000127.1 RefSeq gene 875 950 . + . ID=gene-AD08_RS18045;Name=AD08_RS18045;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS18045;old_locus_tag=AD08_0839 NZ_JHDJ01000127.1 tRNAscan-SE tRNA 875 950 . + . ID=rna-AD08_RS18045;Parent=gene-AD08_RS18045;anticodon=(pos:908..910);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18045;product=tRNA-Lys NZ_JHDJ01000127.1 tRNAscan-SE exon 875 950 . + . ID=exon-AD08_RS18045-1;Parent=rna-AD08_RS18045;anticodon=(pos:908..910);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS18045;product=tRNA-Lys NZ_JHDJ01000127.1 RefSeq gene 981 1106 . + . ID=gene-AD08_RS27480;Name=AD08_RS27480;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD08_RS27480 NZ_JHDJ01000127.1 cmsearch ncRNA 981 1106 . + . ID=rna-AD08_RS27480;Parent=gene-AD08_RS27480;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27480;product=RtT sRNA NZ_JHDJ01000127.1 cmsearch exon 981 1106 . + . ID=exon-AD08_RS27480-1;Parent=rna-AD08_RS27480;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27480;product=RtT sRNA NZ_JHDJ01000127.1 RefSeq gene 1383 2426 . + . ID=gene-AD08_RS18040;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AD08_RS18040;old_locus_tag=AD08_0840 NZ_JHDJ01000127.1 Protein Homology CDS 1383 2426 . + 0 ID=cds-WP_000115290.1;Parent=gene-AD08_RS18040;Dbxref=Genbank:WP_000115290.1;Name=WP_000115290.1;gbkey=CDS;gene=nadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415271.1;locus_tag=AD08_RS18040;product=quinolinate synthase NadA;protein_id=WP_000115290.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 2464 3183 . + . ID=gene-AD08_RS18035;Name=AD08_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18035;old_locus_tag=AD08_0841 NZ_JHDJ01000127.1 Protein Homology CDS 2464 3183 . + 0 ID=cds-WP_000345410.1;Parent=gene-AD08_RS18035;Dbxref=Genbank:WP_000345410.1;Name=WP_000345410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415272.1;locus_tag=AD08_RS18035;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345410.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 3180 4121 . - . ID=gene-AD08_RS18030;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=AD08_RS18030;old_locus_tag=AD08_0842 NZ_JHDJ01000127.1 Protein Homology CDS 3180 4121 . - 0 ID=cds-WP_000951292.1;Parent=gene-AD08_RS18030;Dbxref=Genbank:WP_000951292.1;Name=WP_000951292.1;gbkey=CDS;gene=zitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415273.1;locus_tag=AD08_RS18030;product=CDF family zinc transporter ZitB;protein_id=WP_000951292.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 4235 4615 . - . ID=gene-AD08_RS18025;Name=AD08_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS18025;old_locus_tag=AD08_0843 NZ_JHDJ01000127.1 Protein Homology CDS 4235 4615 . - 0 ID=cds-WP_000784351.1;Parent=gene-AD08_RS18025;Dbxref=Genbank:WP_000784351.1;Name=WP_000784351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415274.1;locus_tag=AD08_RS18025;product=periplasmic protein;protein_id=WP_000784351.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 4931 5983 . + . ID=gene-AD08_RS18020;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=AD08_RS18020;old_locus_tag=AD08_0844 NZ_JHDJ01000127.1 Protein Homology CDS 4931 5983 . + 0 ID=cds-WP_001109196.1;Parent=gene-AD08_RS18020;Dbxref=Genbank:WP_001109196.1;Name=WP_001109196.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=AD08_RS18020;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109196.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 6141 6893 . - . ID=gene-AD08_RS18015;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=AD08_RS18015;old_locus_tag=AD08_0845 NZ_JHDJ01000127.1 Protein Homology CDS 6141 6893 . - 0 ID=cds-WP_001295305.1;Parent=gene-AD08_RS18015;Dbxref=Genbank:WP_001295305.1;Name=WP_001295305.1;gbkey=CDS;gene=gpmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=AD08_RS18015;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_001295305.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 7095 8135 . - . ID=gene-AD08_RS18010;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=AD08_RS18010;old_locus_tag=AD08_0847 NZ_JHDJ01000127.1 Protein Homology CDS 7095 8135 . - 0 ID=cds-WP_000931389.1;Parent=gene-AD08_RS18010;Dbxref=Genbank:WP_000931389.1;Name=WP_000931389.1;gbkey=CDS;gene=galM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415277.1;locus_tag=AD08_RS18010;product=galactose-1-epimerase;protein_id=WP_000931389.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 8129 9277 . - . ID=gene-AD08_RS18005;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=AD08_RS18005;old_locus_tag=AD08_0848 NZ_JHDJ01000127.1 Protein Homology CDS 8129 9277 . - 0 ID=cds-WP_001427167.1;Parent=gene-AD08_RS18005;Dbxref=Genbank:WP_001427167.1;Name=WP_001427167.1;gbkey=CDS;gene=galK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=AD08_RS18005;product=galactokinase;protein_id=WP_001427167.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 9281 10327 . - . ID=gene-AD08_RS18000;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=AD08_RS18000;old_locus_tag=AD08_0849 NZ_JHDJ01000127.1 Protein Homology CDS 9281 10327 . - 0 ID=cds-WP_000191497.1;Parent=gene-AD08_RS18000;Dbxref=Genbank:WP_000191497.1;Name=WP_000191497.1;gbkey=CDS;gene=galT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415279.1;locus_tag=AD08_RS18000;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000191497.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 10337 11353 . - . ID=gene-AD08_RS17995;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=AD08_RS17995;old_locus_tag=AD08_0850 NZ_JHDJ01000127.1 Protein Homology CDS 10337 11353 . - 0 ID=cds-WP_001265438.1;Parent=gene-AD08_RS17995;Dbxref=Genbank:WP_001265438.1;Name=WP_001265438.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415280.3;locus_tag=AD08_RS17995;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265438.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 11614 13086 . - . ID=gene-AD08_RS17990;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=AD08_RS17990;old_locus_tag=AD08_0851 NZ_JHDJ01000127.1 Protein Homology CDS 11614 13086 . - 0 ID=cds-WP_032216636.1;Parent=gene-AD08_RS17990;Dbxref=Genbank:WP_032216636.1;Name=WP_032216636.1;gbkey=CDS;gene=modF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415281.1;locus_tag=AD08_RS17990;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_032216636.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 13154 13942 . - . ID=gene-AD08_RS17985;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=AD08_RS17985;old_locus_tag=AD08_0852 NZ_JHDJ01000127.1 Protein Homology CDS 13154 13942 . - 0 ID=cds-WP_001147439.1;Parent=gene-AD08_RS17985;Dbxref=Genbank:WP_001147439.1;Name=WP_001147439.1;gbkey=CDS;gene=modE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308816.1;locus_tag=AD08_RS17985;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147439.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 14071 14220 . + . ID=gene-AD08_RS17980;Name=AD08_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17980;old_locus_tag=AD08_0853 NZ_JHDJ01000127.1 Protein Homology CDS 14071 14220 . + 0 ID=cds-WP_000891515.1;Parent=gene-AD08_RS17980;Dbxref=Genbank:WP_000891515.1;Name=WP_000891515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308817.1;locus_tag=AD08_RS17980;product=multidrug efflux pump accessory protein AcrZ;protein_id=WP_000891515.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 14387 15160 . + . ID=gene-AD08_RS17975;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=AD08_RS17975;old_locus_tag=AD08_0854 NZ_JHDJ01000127.1 Protein Homology CDS 14387 15160 . + 0 ID=cds-WP_000101984.1;Parent=gene-AD08_RS17975;Dbxref=Genbank:WP_000101984.1;Name=WP_000101984.1;gbkey=CDS;gene=modA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415284.1;locus_tag=AD08_RS17975;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000101984.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 15160 15849 . + . ID=gene-AD08_RS17970;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=AD08_RS17970;old_locus_tag=AD08_0855 NZ_JHDJ01000127.1 Protein Homology CDS 15160 15849 . + 0 ID=cds-WP_000604034.1;Parent=gene-AD08_RS17970;Dbxref=Genbank:WP_000604034.1;Name=WP_000604034.1;gbkey=CDS;gene=modB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308819.1;locus_tag=AD08_RS17970;product=molybdate ABC transporter permease subunit;protein_id=WP_000604034.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 15852 16910 . + . ID=gene-AD08_RS17965;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=AD08_RS17965;old_locus_tag=AD08_0856 NZ_JHDJ01000127.1 Protein Homology CDS 15852 16910 . + 0 ID=cds-WP_000891692.1;Parent=gene-AD08_RS17965;Dbxref=Genbank:WP_000891692.1;Name=WP_000891692.1;gbkey=CDS;gene=modC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415286.1;locus_tag=AD08_RS17965;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891692.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 16911 17729 . - . ID=gene-AD08_RS17960;Name=AD08_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17960;old_locus_tag=AD08_0857 NZ_JHDJ01000127.1 Protein Homology CDS 16911 17729 . - 0 ID=cds-WP_001300666.1;Parent=gene-AD08_RS17960;Dbxref=Genbank:WP_001300666.1;Name=WP_001300666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415287.1;locus_tag=AD08_RS17960;product=bifunctional pyridoxal phosphate/fructose-1%2C6-bisphosphate phosphatase;protein_id=WP_001300666.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 17884 18879 . + . ID=gene-AD08_RS17955;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=AD08_RS17955;old_locus_tag=AD08_0858 NZ_JHDJ01000127.1 Protein Homology CDS 17884 18879 . + 0 ID=cds-WP_000815435.1;Parent=gene-AD08_RS17955;Dbxref=Genbank:WP_000815435.1;Name=WP_000815435.1;gbkey=CDS;gene=pgl;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415288.1;locus_tag=AD08_RS17955;product=6-phosphogluconolactonase;protein_id=WP_000815435.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 18920 19873 . - . ID=gene-AD08_RS17950;Name=AD08_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17950;old_locus_tag=AD08_0859 NZ_JHDJ01000127.1 Protein Homology CDS 18920 19873 . - 0 ID=cds-WP_032218308.1;Parent=gene-AD08_RS17950;Dbxref=Genbank:WP_032218308.1;Name=WP_032218308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308823.3;locus_tag=AD08_RS17950;product=LysR family transcriptional regulator;protein_id=WP_032218308.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 20057 21109 . + . ID=gene-AD08_RS17945;Name=AD08_RS17945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17945;old_locus_tag=AD08_0861 NZ_JHDJ01000127.1 Protein Homology CDS 20057 21109 . + 0 ID=cds-WP_000723652.1;Parent=gene-AD08_RS17945;Dbxref=Genbank:WP_000723652.1;Name=WP_000723652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415290.1;locus_tag=AD08_RS17945;product=4-oxalomesaconate tautomerase;protein_id=WP_000723652.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 21185 22618 . + . ID=gene-AD08_RS17940;Name=AD08_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17940;old_locus_tag=AD08_0862 NZ_JHDJ01000127.1 Protein Homology CDS 21185 22618 . + 0 ID=cds-WP_001036475.1;Parent=gene-AD08_RS17940;Dbxref=Genbank:WP_001036475.1;Name=WP_001036475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415291.1;locus_tag=AD08_RS17940;product=anion permease;protein_id=WP_001036475.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 22801 25062 . + . ID=gene-AD08_RS17935;Name=AD08_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17935;old_locus_tag=AD08_0863 NZ_JHDJ01000127.1 Protein Homology CDS 22801 25062 . + 0 ID=cds-WP_000593938.1;Parent=gene-AD08_RS17935;Dbxref=Genbank:WP_000593938.1;Name=WP_000593938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415292.2;locus_tag=AD08_RS17935;product=hydratase;protein_id=WP_000593938.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 25296 26579 . - . ID=gene-AD08_RS17930;Name=AD08_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17930;old_locus_tag=AD08_0864 NZ_JHDJ01000127.1 Protein Homology CDS 25296 26579 . - 0 ID=cds-WP_001091569.1;Parent=gene-AD08_RS17930;Dbxref=Genbank:WP_001091569.1;Name=WP_001091569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415293.1;locus_tag=AD08_RS17930;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001091569.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 26714 27784 . - . ID=gene-AD08_RS17925;Name=AD08_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17925;old_locus_tag=AD08_0865 NZ_JHDJ01000127.1 Protein Homology CDS 26714 27784 . - 0 ID=cds-WP_000533642.1;Parent=gene-AD08_RS17925;Dbxref=Genbank:WP_000533642.1;Name=WP_000533642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533644.1;locus_tag=AD08_RS17925;product=tyrosine-type recombinase/integrase;protein_id=WP_000533642.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 27762 27980 . - . ID=gene-AD08_RS0125235;Name=AD08_RS0125235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125235 NZ_JHDJ01000127.1 Protein Homology CDS 27762 27980 . - 0 ID=cds-WP_001303849.1;Parent=gene-AD08_RS0125235;Dbxref=Genbank:WP_001303849.1;Name=WP_001303849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001325331.1;locus_tag=AD08_RS0125235;product=excisionase;protein_id=WP_001303849.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 28020 28187 . - . ID=gene-AD08_RS17920;Name=AD08_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17920;old_locus_tag=AD08_0866 NZ_JHDJ01000127.1 Protein Homology CDS 28020 28187 . - 0 ID=cds-WP_000545745.1;Parent=gene-AD08_RS17920;Dbxref=Genbank:WP_000545745.1;Name=WP_000545745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308829.1;locus_tag=AD08_RS17920;product=hypothetical protein;protein_id=WP_000545745.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 28406 28558 . - . ID=gene-AD08_RS28420;Name=AD08_RS28420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS28420 NZ_JHDJ01000127.1 Protein Homology CDS 28406 28558 . - 0 ID=cds-WP_001336413.1;Parent=gene-AD08_RS28420;Dbxref=Genbank:WP_001336413.1;Name=WP_001336413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001336413.1;locus_tag=AD08_RS28420;product=hypothetical protein;protein_id=WP_001336413.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 28536 28820 . - . ID=gene-AD08_RS0125240;Name=AD08_RS0125240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125240 NZ_JHDJ01000127.1 Protein Homology CDS 28536 28820 . - 0 ID=cds-WP_001336414.1;Parent=gene-AD08_RS0125240;Dbxref=Genbank:WP_001336414.1;Name=WP_001336414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001336414.1;locus_tag=AD08_RS0125240;product=hypothetical protein;protein_id=WP_001336414.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 28905 29480 . - . ID=gene-AD08_RS17915;Name=AD08_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17915;old_locus_tag=AD08_0867 NZ_JHDJ01000127.1 Protein Homology CDS 28905 29480 . - 0 ID=cds-WP_000208012.1;Parent=gene-AD08_RS17915;Dbxref=Genbank:WP_000208012.1;Name=WP_000208012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001756303.1;locus_tag=AD08_RS17915;product=hypothetical protein;protein_id=WP_000208012.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 29491 30246 . - . ID=gene-AD08_RS17910;Name=AD08_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17910;old_locus_tag=AD08_0868 NZ_JHDJ01000127.1 Protein Homology CDS 29491 30246 . - 0 ID=cds-WP_000582234.1;Parent=gene-AD08_RS17910;Dbxref=Genbank:WP_000582234.1;Name=WP_000582234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317344.1;locus_tag=AD08_RS17910;product=hypothetical protein;protein_id=WP_000582234.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 30248 30655 . - . ID=gene-AD08_RS17905;Name=AD08_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17905;old_locus_tag=AD08_0869 NZ_JHDJ01000127.1 Protein Homology CDS 30248 30655 . - 0 ID=cds-WP_001289864.1;Parent=gene-AD08_RS17905;Dbxref=Genbank:WP_001289864.1;Name=WP_001289864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289863.1;locus_tag=AD08_RS17905;product=ead/Ea22-like family protein;protein_id=WP_001289864.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 30652 30873 . - . ID=gene-AD08_RS0125245;Name=AD08_RS0125245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125245 NZ_JHDJ01000127.1 Protein Homology CDS 30652 30873 . - 0 ID=cds-WP_000763378.1;Parent=gene-AD08_RS0125245;Dbxref=Genbank:WP_000763378.1;Name=WP_000763378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311033.1;locus_tag=AD08_RS0125245;product=TraR/DksA family transcriptional regulator;protein_id=WP_000763378.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 30972 31253 . - . ID=gene-AD08_RS17900;Name=AD08_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17900;old_locus_tag=AD08_0870 NZ_JHDJ01000127.1 Protein Homology CDS 30972 31253 . - 0 ID=cds-WP_001386642.1;Parent=gene-AD08_RS17900;Dbxref=Genbank:WP_001386642.1;Name=WP_001386642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239470.1;locus_tag=AD08_RS17900;product=cell division protein ZapA;protein_id=WP_001386642.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 31264 31455 . - . ID=gene-AD08_RS0125255;Name=AD08_RS0125255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125255 NZ_JHDJ01000127.1 Protein Homology CDS 31264 31455 . - 0 ID=cds-WP_000548537.1;Parent=gene-AD08_RS0125255;Dbxref=Genbank:WP_000548537.1;Name=WP_000548537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308834.1;locus_tag=AD08_RS0125255;product=DUF1382 family protein;protein_id=WP_000548537.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 31428 31610 . - . ID=gene-AD08_RS17895;Name=AD08_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17895;old_locus_tag=AD08_0872 NZ_JHDJ01000127.1 Protein Homology CDS 31428 31610 . - 0 ID=cds-WP_032218312.1;Parent=gene-AD08_RS17895;Dbxref=Genbank:WP_032218312.1;Name=WP_032218312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308835.1;locus_tag=AD08_RS17895;product=DUF1317 domain-containing protein;protein_id=WP_032218312.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 31607 32287 . - . ID=gene-AD08_RS17890;Name=AD08_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17890;old_locus_tag=AD08_0873 NZ_JHDJ01000127.1 Protein Homology CDS 31607 32287 . - 0 ID=cds-WP_021546785.1;Parent=gene-AD08_RS17890;Dbxref=Genbank:WP_021546785.1;Name=WP_021546785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308836.1;locus_tag=AD08_RS17890;product=YqaJ viral recombinase family protein;protein_id=WP_021546785.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 32284 33069 . - . ID=gene-AD08_RS17885;Name=bet;gbkey=Gene;gene=bet;gene_biotype=protein_coding;locus_tag=AD08_RS17885;old_locus_tag=AD08_0874 NZ_JHDJ01000127.1 Protein Homology CDS 32284 33069 . - 0 ID=cds-WP_000100845.1;Parent=gene-AD08_RS17885;Dbxref=Genbank:WP_000100845.1;Name=WP_000100845.1;gbkey=CDS;gene=bet;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309202.1;locus_tag=AD08_RS17885;product=phage recombination protein Bet;protein_id=WP_000100845.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 33075 33371 . - . ID=gene-AD08_RS17880;Name=AD08_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17880;old_locus_tag=AD08_0875 NZ_JHDJ01000127.1 Protein Homology CDS 33075 33371 . - 0 ID=cds-WP_000995433.1;Parent=gene-AD08_RS17880;Dbxref=Genbank:WP_000995433.1;Name=WP_000995433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309203.2;locus_tag=AD08_RS17880;product=host-nuclease inhibitor protein Gam;protein_id=WP_000995433.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 33447 33653 . - . ID=gene-AD08_RS17875;Name=AD08_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17875;old_locus_tag=AD08_0876 NZ_JHDJ01000127.1 Protein Homology CDS 33447 33653 . - 0 ID=cds-WP_000233576.1;Parent=gene-AD08_RS17875;Dbxref=Genbank:WP_000233576.1;Name=WP_000233576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524508.1;locus_tag=AD08_RS17875;product=phage encoded cell division inhibitor protein;protein_id=WP_000233576.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 34251 35006 . - . ID=gene-AD08_RS17870;Name=AD08_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17870;old_locus_tag=AD08_0877 NZ_JHDJ01000127.1 Protein Homology CDS 34251 35006 . - 0 ID=cds-WP_000259990.1;Parent=gene-AD08_RS17870;Dbxref=Genbank:WP_000259990.1;Name=WP_000259990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001427980.1;locus_tag=AD08_RS17870;product=helix-turn-helix transcriptional regulator;protein_id=WP_000259990.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 35045 35275 . + . ID=gene-AD08_RS17865;Name=AD08_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17865;old_locus_tag=AD08_0878 NZ_JHDJ01000127.1 Protein Homology CDS 35045 35275 . + 0 ID=cds-WP_001067458.1;Parent=gene-AD08_RS17865;Dbxref=Genbank:WP_001067458.1;Name=WP_001067458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067458.1;locus_tag=AD08_RS17865;product=helix-turn-helix domain-containing protein;protein_id=WP_001067458.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 35345 35884 . + . ID=gene-AD08_RS17860;Name=AD08_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17860;old_locus_tag=AD08_0879 NZ_JHDJ01000127.1 Protein Homology CDS 35345 35884 . + 0 ID=cds-WP_001182903.1;Parent=gene-AD08_RS17860;Dbxref=Genbank:WP_001182903.1;Name=WP_001182903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001182892.1;locus_tag=AD08_RS17860;product=hypothetical protein;protein_id=WP_001182903.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 35971 36900 . + . ID=gene-AD08_RS17855;Name=AD08_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17855;old_locus_tag=AD08_0880 NZ_JHDJ01000127.1 Protein Homology CDS 35971 36900 . + 0 ID=cds-WP_032218314.1;Parent=gene-AD08_RS17855;Dbxref=Genbank:WP_032218314.1;Name=WP_032218314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016247981.1;locus_tag=AD08_RS17855;product=replication protein;protein_id=WP_032218314.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 36897 37598 . + . ID=gene-AD08_RS17850;Name=AD08_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17850;old_locus_tag=AD08_0881 NZ_JHDJ01000127.1 Protein Homology CDS 36897 37598 . + 0 ID=cds-WP_000788812.1;Parent=gene-AD08_RS17850;Dbxref=Genbank:WP_000788812.1;Name=WP_000788812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309639.1;locus_tag=AD08_RS17850;product=hypothetical protein;protein_id=WP_000788812.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 37595 37897 . + . ID=gene-AD08_RS17845;Name=AD08_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17845;old_locus_tag=AD08_0882 NZ_JHDJ01000127.1 Protein Homology CDS 37595 37897 . + 0 ID=cds-WP_000145901.1;Parent=gene-AD08_RS17845;Dbxref=Genbank:WP_000145901.1;Name=WP_000145901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309640.1;locus_tag=AD08_RS17845;product=protein ren;protein_id=WP_000145901.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 37965 38297 . + . ID=gene-AD08_RS17840;Name=emrE;gbkey=Gene;gene=emrE;gene_biotype=protein_coding;locus_tag=AD08_RS17840;old_locus_tag=AD08_0883 NZ_JHDJ01000127.1 Protein Homology CDS 37965 38297 . + 0 ID=cds-WP_001070442.1;Parent=gene-AD08_RS17840;Dbxref=Genbank:WP_001070442.1;Name=WP_001070442.1;gbkey=CDS;gene=emrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309641.1;locus_tag=AD08_RS17840;product=SMR family multidrug efflux protein EmrE;protein_id=WP_001070442.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 38346 38456 . + . ID=gene-AD08_RS31615;Name=AD08_RS31615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31615 NZ_JHDJ01000127.1 Protein Homology CDS 38346 38456 . + 0 ID=cds-WP_044168796.1;Parent=gene-AD08_RS31615;Dbxref=Genbank:WP_044168796.1;Name=WP_044168796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518754.1;locus_tag=AD08_RS31615;product=hypothetical protein;protein_id=WP_044168796.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 38553 40079 . + . ID=gene-AD08_RS17835;Name=AD08_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17835;old_locus_tag=AD08_0884 NZ_JHDJ01000127.1 Protein Homology CDS 38553 40079 . + 0 ID=cds-WP_000709099.1;Parent=gene-AD08_RS17835;Dbxref=Genbank:WP_000709099.1;Name=WP_000709099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415076.1;locus_tag=AD08_RS17835;product=recombinase family protein;protein_id=WP_000709099.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 40191 40430 . + . ID=gene-AD08_RS0125265;Name=AD08_RS0125265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125265 NZ_JHDJ01000127.1 Protein Homology CDS 40191 40430 . + 0 ID=cds-WP_000338663.1;Parent=gene-AD08_RS0125265;Dbxref=Genbank:WP_000338663.1;Name=WP_000338663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338663.1;locus_tag=AD08_RS0125265;product=hypothetical protein;protein_id=WP_000338663.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 40749 41258 . + . ID=gene-AD08_RS0125270;Name=AD08_RS0125270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125270 NZ_JHDJ01000127.1 Protein Homology CDS 40749 41258 . + 0 ID=cds-WP_000990013.1;Parent=gene-AD08_RS0125270;Dbxref=Genbank:WP_000990013.1;Name=WP_000990013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990010.1;locus_tag=AD08_RS0125270;product=hypothetical protein;protein_id=WP_000990013.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 41355 41456 . + . ID=gene-AD08_RS30345;Name=AD08_RS30345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30345 NZ_JHDJ01000127.1 Protein Homology CDS 41355 41456 . + 0 ID=cds-WP_072147432.1;Parent=gene-AD08_RS30345;Dbxref=Genbank:WP_072147432.1;Name=WP_072147432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165308.1;locus_tag=AD08_RS30345;product=hypothetical protein;protein_id=WP_072147432.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 41453 41908 . + . ID=gene-AD08_RS17830;Name=ybcN;gbkey=Gene;gene=ybcN;gene_biotype=protein_coding;locus_tag=AD08_RS17830;old_locus_tag=AD08_0886 NZ_JHDJ01000127.1 Protein Homology CDS 41453 41908 . + 0 ID=cds-WP_032218310.1;Parent=gene-AD08_RS17830;Dbxref=Genbank:WP_032218310.1;Name=WP_032218310.1;gbkey=CDS;gene=ybcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415079.1;locus_tag=AD08_RS17830;product=DNA base-flipping protein YbcN;protein_id=WP_032218310.1;transl_table=11 NZ_JHDJ01000127.1 RefSeq gene 41960 42339 . - . ID=gene-AD08_RS17825;Name=AD08_RS17825;end_range=42339,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17825;old_locus_tag=AD08_0887;partial=true NZ_JHDJ01000127.1 Protein Homology CDS 41960 42339 . - 2 ID=cds-WP_032218316.1;Parent=gene-AD08_RS17825;Dbxref=Genbank:WP_032218316.1;Name=WP_032218316.1;end_range=42339,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS17825;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_032218316.1;transl_table=11 ##sequence-region NZ_JHDJ01000128.1 1 65407 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000128.1 RefSeq region 1 65407 . + . ID=NZ_JHDJ01000128.1:1..65407;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000128.1 RefSeq pseudogene 1 373 . - . ID=gene-AD08_RS17820;Name=AD08_RS17820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS17820;old_locus_tag=AD08_0888;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000128.1 Protein Homology CDS 1 373 . - 0 ID=cds-AD08_RS17820;Parent=gene-AD08_RS17820;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS17820;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000128.1 cmsearch sequence_feature 1 92 . - . ID=id-AD08_RS17820;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS17820;partial=true;start_range=.,1 NZ_JHDJ01000128.1 RefSeq gene 445 591 . + . ID=gene-AD08_RS17815;Name=AD08_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17815;old_locus_tag=AD08_0889 NZ_JHDJ01000128.1 Protein Homology CDS 445 591 . + 0 ID=cds-WP_001498954.1;Parent=gene-AD08_RS17815;Dbxref=Genbank:WP_001498954.1;Name=WP_001498954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309644.1;locus_tag=AD08_RS17815;product=hypothetical protein;protein_id=WP_001498954.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 584 874 . + . ID=gene-AD08_RS17810;Name=AD08_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17810;old_locus_tag=AD08_0890 NZ_JHDJ01000128.1 Protein Homology CDS 584 874 . + 0 ID=cds-WP_000774504.1;Parent=gene-AD08_RS17810;Dbxref=Genbank:WP_000774504.1;Name=WP_000774504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309645.1;locus_tag=AD08_RS17810;product=DUF1364 domain-containing protein;protein_id=WP_000774504.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 871 1233 . + . ID=gene-AD08_RS17805;Name=rusA;gbkey=Gene;gene=rusA;gene_biotype=protein_coding;locus_tag=AD08_RS17805;old_locus_tag=AD08_0891 NZ_JHDJ01000128.1 Protein Homology CDS 871 1233 . + 0 ID=cds-WP_001099712.1;Parent=gene-AD08_RS17805;Dbxref=Genbank:WP_001099712.1;Name=WP_001099712.1;gbkey=CDS;gene=rusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415082.1;locus_tag=AD08_RS17805;product=crossover junction endodeoxyribonuclease RusA;protein_id=WP_001099712.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 1230 1370 . + . ID=gene-AD08_RS17800;Name=AD08_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17800;old_locus_tag=AD08_0892 NZ_JHDJ01000128.1 Protein Homology CDS 1230 1370 . + 0 ID=cds-WP_000971074.1;Parent=gene-AD08_RS17800;Dbxref=Genbank:WP_000971074.1;Name=WP_000971074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588439.1;locus_tag=AD08_RS17800;product=YlcG family protein;protein_id=WP_000971074.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 1456 1839 . + . ID=gene-AD08_RS17795;Name=quuD;gbkey=Gene;gene=quuD;gene_biotype=protein_coding;locus_tag=AD08_RS17795;old_locus_tag=AD08_0893 NZ_JHDJ01000128.1 Protein Homology CDS 1456 1839 . + 0 ID=cds-WP_001204791.1;Parent=gene-AD08_RS17795;Dbxref=Genbank:WP_001204791.1;Name=WP_001204791.1;gbkey=CDS;gene=quuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415083.1;locus_tag=AD08_RS17795;product=antitermination protein QuuD;protein_id=WP_001204791.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 2028 3110 . - . ID=gene-AD08_RS17790;Name=AD08_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17790;old_locus_tag=AD08_0894 NZ_JHDJ01000128.1 Protein Homology CDS 2028 3110 . - 0 ID=cds-WP_000737263.1;Parent=gene-AD08_RS17790;Dbxref=Genbank:WP_000737263.1;Name=WP_000737263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707819.1;locus_tag=AD08_RS17790;product=porin OmpD;protein_id=WP_000737263.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 3699 3914 . + . ID=gene-AD08_RS17785;Name=essD;gbkey=Gene;gene=essD;gene_biotype=protein_coding;locus_tag=AD08_RS17785;old_locus_tag=AD08_0895 NZ_JHDJ01000128.1 Protein Homology CDS 3699 3914 . + 0 ID=cds-WP_000839596.1;Parent=gene-AD08_RS17785;Dbxref=Genbank:WP_000839596.1;Name=WP_000839596.1;gbkey=CDS;gene=essD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415086.1;locus_tag=AD08_RS17785;product=phage lysis protein EssD;protein_id=WP_000839596.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 3914 4411 . + . ID=gene-AD08_RS17780;Name=AD08_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17780;old_locus_tag=AD08_0896 NZ_JHDJ01000128.1 Protein Homology CDS 3914 4411 . + 0 ID=cds-WP_001135297.1;Parent=gene-AD08_RS17780;Dbxref=Genbank:WP_001135297.1;Name=WP_001135297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415087.1;locus_tag=AD08_RS17780;product=lysozyme RrrD;protein_id=WP_001135297.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 4408 4845 . + . ID=gene-AD08_RS17775;Name=AD08_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17775;old_locus_tag=AD08_0897 NZ_JHDJ01000128.1 Protein Homology CDS 4408 4845 . + 0 ID=cds-WP_000092234.1;Parent=gene-AD08_RS17775;Dbxref=Genbank:WP_000092234.1;Name=WP_000092234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009453323.1;locus_tag=AD08_RS17775;product=lysis protein;protein_id=WP_000092234.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 5051 5572 . + . ID=gene-AD08_RS17770;Name=AD08_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17770;old_locus_tag=AD08_0898 NZ_JHDJ01000128.1 Protein Homology CDS 5051 5572 . + 0 ID=cds-WP_001028465.1;Parent=gene-AD08_RS17770;Dbxref=Genbank:WP_001028465.1;Name=WP_001028465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001723433.1;locus_tag=AD08_RS17770;product=DNA-binding protein;protein_id=WP_001028465.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 5922 6332 . - . ID=gene-AD08_RS0125300;Name=AD08_RS0125300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125300 NZ_JHDJ01000128.1 Protein Homology CDS 5922 6332 . - 0 ID=cds-WP_000079508.1;Parent=gene-AD08_RS0125300;Dbxref=Genbank:WP_000079508.1;Name=WP_000079508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619138.1;locus_tag=AD08_RS0125300;product=DUF1398 family protein;protein_id=WP_000079508.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 6389 6622 . - . ID=gene-AD08_RS0125305;Name=AD08_RS0125305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125305 NZ_JHDJ01000128.1 Protein Homology CDS 6389 6622 . - 0 ID=cds-WP_000105084.1;Parent=gene-AD08_RS0125305;Dbxref=Genbank:WP_000105084.1;Name=WP_000105084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588454.1;locus_tag=AD08_RS0125305;product=YlcI/YnfO family protein;protein_id=WP_000105084.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 7011 7556 . + . ID=gene-AD08_RS17765;Name=AD08_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17765;old_locus_tag=AD08_0901 NZ_JHDJ01000128.1 Protein Homology CDS 7011 7556 . + 0 ID=cds-WP_000453580.1;Parent=gene-AD08_RS17765;Dbxref=Genbank:WP_000453580.1;Name=WP_000453580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415092.1;locus_tag=AD08_RS17765;product=DNA-packaging protein;protein_id=WP_000453580.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 7531 9456 . + . ID=gene-AD08_RS17760;Name=AD08_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17760;old_locus_tag=AD08_0902 NZ_JHDJ01000128.1 Protein Homology CDS 7531 9456 . + 0 ID=cds-WP_032218326.1;Parent=gene-AD08_RS17760;Dbxref=Genbank:WP_032218326.1;Name=WP_032218326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309657.1;locus_tag=AD08_RS17760;product=phage terminase large subunit family protein;protein_id=WP_032218326.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 9453 9659 . + . ID=gene-AD08_RS17755;Name=AD08_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17755;old_locus_tag=AD08_0903 NZ_JHDJ01000128.1 Protein Homology CDS 9453 9659 . + 0 ID=cds-WP_000198149.1;Parent=gene-AD08_RS17755;Dbxref=Genbank:WP_000198149.1;Name=WP_000198149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309658.1;locus_tag=AD08_RS17755;product=Lambda prophage-derived head-to-tail joining protein W;protein_id=WP_000198149.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 9656 11257 . + . ID=gene-AD08_RS17750;Name=AD08_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17750;old_locus_tag=AD08_0904 NZ_JHDJ01000128.1 Protein Homology CDS 9656 11257 . + 0 ID=cds-WP_032218328.1;Parent=gene-AD08_RS17750;Dbxref=Genbank:WP_032218328.1;Name=WP_032218328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309659.1;locus_tag=AD08_RS17750;product=phage portal protein;protein_id=WP_032218328.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 11238 12557 . + . ID=gene-AD08_RS17745;Name=AD08_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17745;old_locus_tag=AD08_0905 NZ_JHDJ01000128.1 Protein Homology CDS 11238 12557 . + 0 ID=cds-WP_032218330.1;Parent=gene-AD08_RS17745;Dbxref=Genbank:WP_032218330.1;Name=WP_032218330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309660.1;locus_tag=AD08_RS17745;product=S49 family peptidase;protein_id=WP_032218330.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 12567 12899 . + . ID=gene-AD08_RS17740;Name=AD08_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17740;old_locus_tag=AD08_0906 NZ_JHDJ01000128.1 Protein Homology CDS 12567 12899 . + 0 ID=cds-WP_001299443.1;Parent=gene-AD08_RS17740;Dbxref=Genbank:WP_001299443.1;Name=WP_001299443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309661.1;locus_tag=AD08_RS17740;product=head decoration protein;protein_id=WP_001299443.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 12955 13980 . + . ID=gene-AD08_RS17735;Name=AD08_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17735;old_locus_tag=AD08_0907 NZ_JHDJ01000128.1 Protein Homology CDS 12955 13980 . + 0 ID=cds-WP_000063238.1;Parent=gene-AD08_RS17735;Dbxref=Genbank:WP_000063238.1;Name=WP_000063238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309662.1;locus_tag=AD08_RS17735;product=major capsid protein;protein_id=WP_000063238.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 14022 14417 . + . ID=gene-AD08_RS17730;Name=AD08_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17730;old_locus_tag=AD08_0908 NZ_JHDJ01000128.1 Protein Homology CDS 14022 14417 . + 0 ID=cds-WP_000158875.1;Parent=gene-AD08_RS17730;Dbxref=Genbank:WP_000158875.1;Name=WP_000158875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309663.1;locus_tag=AD08_RS17730;product=DNA-packaging protein FI;protein_id=WP_000158875.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 14429 14782 . + . ID=gene-AD08_RS17725;Name=AD08_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17725;old_locus_tag=AD08_0909 NZ_JHDJ01000128.1 Protein Homology CDS 14429 14782 . + 0 ID=cds-WP_000785282.1;Parent=gene-AD08_RS17725;Dbxref=Genbank:WP_000785282.1;Name=WP_000785282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309664.1;locus_tag=AD08_RS17725;product=tail attachment protein;protein_id=WP_000785282.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 14794 15372 . + . ID=gene-AD08_RS17720;Name=AD08_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17720;old_locus_tag=AD08_0910 NZ_JHDJ01000128.1 Protein Homology CDS 14794 15372 . + 0 ID=cds-WP_000975081.1;Parent=gene-AD08_RS17720;Dbxref=Genbank:WP_000975081.1;Name=WP_000975081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309665.1;locus_tag=AD08_RS17720;product=phage tail protein;protein_id=WP_000975081.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 15369 15764 . + . ID=gene-AD08_RS17715;Name=AD08_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17715;old_locus_tag=AD08_0911 NZ_JHDJ01000128.1 Protein Homology CDS 15369 15764 . + 0 ID=cds-WP_000683129.1;Parent=gene-AD08_RS17715;Dbxref=Genbank:WP_000683129.1;Name=WP_000683129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310197.1;locus_tag=AD08_RS17715;product=tail protein;protein_id=WP_000683129.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 15772 16512 . + . ID=gene-AD08_RS17710;Name=AD08_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17710;old_locus_tag=AD08_0912 NZ_JHDJ01000128.1 Protein Homology CDS 15772 16512 . + 0 ID=cds-WP_001317730.1;Parent=gene-AD08_RS17710;Dbxref=Genbank:WP_001317730.1;Name=WP_001317730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309667.1;locus_tag=AD08_RS17710;product=phage tail protein;protein_id=WP_001317730.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 16528 16950 . + . ID=gene-AD08_RS17705;Name=AD08_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17705;old_locus_tag=AD08_0913 NZ_JHDJ01000128.1 Protein Homology CDS 16528 16950 . + 0 ID=cds-WP_000479200.1;Parent=gene-AD08_RS17705;Dbxref=Genbank:WP_000479200.1;Name=WP_000479200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309668.1;locus_tag=AD08_RS17705;product=phage minor tail protein G;protein_id=WP_000479200.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 16932 17366 . + . ID=gene-AD08_RS17700;Name=AD08_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17700;old_locus_tag=AD08_0914 NZ_JHDJ01000128.1 Protein Homology CDS 16932 17366 . + 0 ID=cds-WP_000459457.1;Parent=gene-AD08_RS17700;Dbxref=Genbank:WP_000459457.1;Name=WP_000459457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309669.1;locus_tag=AD08_RS17700;product=phage tail assembly protein T;protein_id=WP_000459457.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 17359 19920 . + . ID=gene-AD08_RS17695;Name=AD08_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17695;old_locus_tag=AD08_0915 NZ_JHDJ01000128.1 Protein Homology CDS 17359 19920 . + 0 ID=cds-WP_000840291.1;Parent=gene-AD08_RS17695;Dbxref=Genbank:WP_000840291.1;Name=WP_000840291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309670.1;locus_tag=AD08_RS17695;product=phage tail tape measure protein;protein_id=WP_000840291.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 19917 20246 . + . ID=gene-AD08_RS17690;Name=AD08_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17690;old_locus_tag=AD08_0916 NZ_JHDJ01000128.1 Protein Homology CDS 19917 20246 . + 0 ID=cds-WP_000847379.1;Parent=gene-AD08_RS17690;Dbxref=Genbank:WP_000847379.1;Name=WP_000847379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309671.1;locus_tag=AD08_RS17690;product=phage tail protein;protein_id=WP_000847379.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 20246 20944 . + . ID=gene-AD08_RS17685;Name=AD08_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17685;old_locus_tag=AD08_0917 NZ_JHDJ01000128.1 Protein Homology CDS 20246 20944 . + 0 ID=cds-WP_032218334.1;Parent=gene-AD08_RS17685;Dbxref=Genbank:WP_032218334.1;Name=WP_032218334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309672.1;locus_tag=AD08_RS17685;product=phage minor tail protein L;protein_id=WP_032218334.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 20950 21693 . + . ID=gene-AD08_RS17680;Name=AD08_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17680;old_locus_tag=AD08_0918 NZ_JHDJ01000128.1 Protein Homology CDS 20950 21693 . + 0 ID=cds-WP_000140717.1;Parent=gene-AD08_RS17680;Dbxref=Genbank:WP_000140717.1;Name=WP_000140717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309673.1;locus_tag=AD08_RS17680;product=phage tail protein;protein_id=WP_000140717.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 21630 22262 . + . ID=gene-AD08_RS17675;Name=AD08_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17675;old_locus_tag=AD08_0919 NZ_JHDJ01000128.1 Protein Homology CDS 21630 22262 . + 0 ID=cds-WP_000090917.1;Parent=gene-AD08_RS17675;Dbxref=Genbank:WP_000090917.1;Name=WP_000090917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000090899.1;locus_tag=AD08_RS17675;product=tail assembly protein;protein_id=WP_000090917.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 22323 25820 . + . ID=gene-AD08_RS17670;Name=AD08_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17670;old_locus_tag=AD08_0920 NZ_JHDJ01000128.1 Protein Homology CDS 22323 25820 . + 0 ID=cds-WP_000515639.1;Parent=gene-AD08_RS17670;Dbxref=Genbank:WP_000515639.1;Name=WP_000515639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308869.1;locus_tag=AD08_RS17670;product=host specificity protein J;protein_id=WP_000515639.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 25891 26490 . + . ID=gene-AD08_RS17665;Name=AD08_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17665;old_locus_tag=AD08_0921 NZ_JHDJ01000128.1 Protein Homology CDS 25891 26490 . + 0 ID=cds-WP_001233090.1;Parent=gene-AD08_RS17665;Dbxref=Genbank:WP_001233090.1;Name=WP_001233090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309676.1;locus_tag=AD08_RS17665;product=Ail/Lom family protein;protein_id=WP_001233090.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 26555 29629 . + . ID=gene-AD08_RS28430;Name=AD08_RS28430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS28430 NZ_JHDJ01000128.1 Protein Homology CDS 26555 29629 . + 0 ID=cds-WP_071995819.1;Parent=gene-AD08_RS28430;Dbxref=Genbank:WP_071995819.1;Name=WP_071995819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001569831.1;locus_tag=AD08_RS28430;product=phage tail protein;protein_id=WP_071995819.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 29629 30213 . + . ID=gene-AD08_RS17645;Name=AD08_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17645;old_locus_tag=AD08_0926 NZ_JHDJ01000128.1 Protein Homology CDS 29629 30213 . + 0 ID=cds-WP_000885623.1;Parent=gene-AD08_RS17645;Dbxref=Genbank:WP_000885623.1;Name=WP_000885623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885619.1;locus_tag=AD08_RS17645;product=tail fiber assembly protein;protein_id=WP_000885623.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 30287 31618 . - . ID=gene-AD08_RS17640;Name=AD08_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17640;old_locus_tag=AD08_0927 NZ_JHDJ01000128.1 Protein Homology CDS 30287 31618 . - 0 ID=cds-WP_000586343.1;Parent=gene-AD08_RS17640;Dbxref=Genbank:WP_000586343.1;Name=WP_000586343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586337.1;locus_tag=AD08_RS17640;product=GGDEF domain-containing protein;protein_id=WP_000586343.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 32364 32840 . - . ID=gene-AD08_RS17635;Name=AD08_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17635;old_locus_tag=AD08_0928 NZ_JHDJ01000128.1 Protein Homology CDS 32364 32840 . - 0 ID=cds-WP_000767389.1;Parent=gene-AD08_RS17635;Dbxref=Genbank:WP_000767389.1;Name=WP_000767389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415294.1;locus_tag=AD08_RS17635;product=kinase inhibitor;protein_id=WP_000767389.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 32899 34188 . - . ID=gene-AD08_RS17630;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=AD08_RS17630;old_locus_tag=AD08_0929 NZ_JHDJ01000128.1 Protein Homology CDS 32899 34188 . - 0 ID=cds-WP_001295303.1;Parent=gene-AD08_RS17630;Dbxref=Genbank:WP_001295303.1;Name=WP_001295303.1;gbkey=CDS;gene=bioA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415295.1;locus_tag=AD08_RS17630;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_001295303.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 34275 35315 . + . ID=gene-AD08_RS17625;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=AD08_RS17625;old_locus_tag=AD08_0930 NZ_JHDJ01000128.1 Protein Homology CDS 34275 35315 . + 0 ID=cds-WP_000951213.1;Parent=gene-AD08_RS17625;Dbxref=Genbank:WP_000951213.1;Name=WP_000951213.1;gbkey=CDS;gene=bioB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415296.1;locus_tag=AD08_RS17625;product=biotin synthase BioB;protein_id=WP_000951213.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 35312 36466 . + . ID=gene-AD08_RS17620;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=AD08_RS17620;old_locus_tag=AD08_0931 NZ_JHDJ01000128.1 Protein Homology CDS 35312 36466 . + 0 ID=cds-WP_000118826.1;Parent=gene-AD08_RS17620;Dbxref=Genbank:WP_000118826.1;Name=WP_000118826.1;gbkey=CDS;gene=bioF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415297.1;locus_tag=AD08_RS17620;product=8-amino-7-oxononanoate synthase;protein_id=WP_000118826.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 36453 37208 . + . ID=gene-AD08_RS17615;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=AD08_RS17615;old_locus_tag=AD08_0932 NZ_JHDJ01000128.1 Protein Homology CDS 36453 37208 . + 0 ID=cds-WP_023486776.1;Parent=gene-AD08_RS17615;Dbxref=Genbank:WP_023486776.1;Name=WP_023486776.1;gbkey=CDS;gene=bioC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415298.1;locus_tag=AD08_RS17615;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_023486776.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 37201 37878 . + . ID=gene-AD08_RS17610;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AD08_RS17610;old_locus_tag=AD08_0933 NZ_JHDJ01000128.1 Protein Homology CDS 37201 37878 . + 0 ID=cds-WP_000044843.1;Parent=gene-AD08_RS17610;Dbxref=Genbank:WP_000044843.1;Name=WP_000044843.1;gbkey=CDS;gene=bioD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415299.1;locus_tag=AD08_RS17610;product=ATP-dependent dethiobiotin synthetase BioD;protein_id=WP_000044843.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 38457 40478 . + . ID=gene-AD08_RS17605;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=AD08_RS17605;old_locus_tag=AD08_0934 NZ_JHDJ01000128.1 Protein Homology CDS 38457 40478 . + 0 ID=cds-WP_001499542.1;Parent=gene-AD08_RS17605;Dbxref=Genbank:WP_001499542.1;Name=WP_001499542.1;gbkey=CDS;gene=uvrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=AD08_RS17605;product=excinuclease ABC subunit B;protein_id=WP_001499542.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 40670 41578 . - . ID=gene-AD08_RS17600;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=AD08_RS17600;old_locus_tag=AD08_0935 NZ_JHDJ01000128.1 Protein Homology CDS 40670 41578 . - 0 ID=cds-WP_001295302.1;Parent=gene-AD08_RS17600;Dbxref=Genbank:WP_001295302.1;Name=WP_001295302.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415301.1;locus_tag=AD08_RS17600;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001295302.1;transl_table=11 NZ_JHDJ01000128.1 cmsearch riboswitch 41843 41987 . + . ID=id-NZ_JHDJ01000128.1:41843..41987;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_JHDJ01000128.1 RefSeq gene 41975 42964 . + . ID=gene-AD08_RS17595;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AD08_RS17595;old_locus_tag=AD08_0936 NZ_JHDJ01000128.1 Protein Homology CDS 41975 42964 . + 0 ID=cds-WP_001340186.1;Parent=gene-AD08_RS17595;Dbxref=Genbank:WP_001340186.1;Name=WP_001340186.1;gbkey=CDS;gene=moaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308886.1;locus_tag=AD08_RS17595;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_001340186.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 42986 43498 . + . ID=gene-AD08_RS17590;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=AD08_RS17590;old_locus_tag=AD08_0937 NZ_JHDJ01000128.1 Protein Homology CDS 42986 43498 . + 0 ID=cds-WP_000084639.1;Parent=gene-AD08_RS17590;Dbxref=Genbank:WP_000084639.1;Name=WP_000084639.1;gbkey=CDS;gene=moaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=AD08_RS17590;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084639.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 43501 43986 . + . ID=gene-AD08_RS17585;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AD08_RS17585;old_locus_tag=AD08_0938 NZ_JHDJ01000128.1 Protein Homology CDS 43501 43986 . + 0 ID=cds-WP_000080885.1;Parent=gene-AD08_RS17585;Dbxref=Genbank:WP_000080885.1;Name=WP_000080885.1;gbkey=CDS;gene=moaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308888.1;locus_tag=AD08_RS17585;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080885.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 43979 44224 . + . ID=gene-AD08_RS17580;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=AD08_RS17580;old_locus_tag=AD08_0939 NZ_JHDJ01000128.1 Protein Homology CDS 43979 44224 . + 0 ID=cds-WP_000598619.1;Parent=gene-AD08_RS17580;Dbxref=Genbank:WP_000598619.1;Name=WP_000598619.1;gbkey=CDS;gene=moaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415305.1;locus_tag=AD08_RS17580;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598619.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 44226 44678 . + . ID=gene-AD08_RS17575;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=AD08_RS17575;old_locus_tag=AD08_0940 NZ_JHDJ01000128.1 Protein Homology CDS 44226 44678 . + 0 ID=cds-WP_032218339.1;Parent=gene-AD08_RS17575;Dbxref=Genbank:WP_032218339.1;Name=WP_032218339.1;gbkey=CDS;gene=moaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415306.1;locus_tag=AD08_RS17575;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_032218339.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 44815 45519 . + . ID=gene-AD08_RS17570;Name=AD08_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17570;old_locus_tag=AD08_0941 NZ_JHDJ01000128.1 Protein Homology CDS 44815 45519 . + 0 ID=cds-WP_000373624.1;Parent=gene-AD08_RS17570;Dbxref=Genbank:WP_000373624.1;Name=WP_000373624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415307.1;locus_tag=AD08_RS17570;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373624.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 45724 46437 . + . ID=gene-AD08_RS17565;Name=AD08_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17565;old_locus_tag=AD08_0942 NZ_JHDJ01000128.1 Protein Homology CDS 45724 46437 . + 0 ID=cds-WP_000446917.1;Parent=gene-AD08_RS17565;Dbxref=Genbank:WP_000446917.1;Name=WP_000446917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706665.2;locus_tag=AD08_RS17565;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000446917.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 46473 47429 . - . ID=gene-AD08_RS17560;Name=AD08_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17560;old_locus_tag=AD08_0943 NZ_JHDJ01000128.1 Protein Homology CDS 46473 47429 . - 0 ID=cds-WP_000045450.1;Parent=gene-AD08_RS17560;Dbxref=Genbank:WP_000045450.1;Name=WP_000045450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415309.1;locus_tag=AD08_RS17560;product=UPF0104 family protein;protein_id=WP_000045450.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 47429 48670 . - . ID=gene-AD08_RS17555;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=AD08_RS17555;old_locus_tag=AD08_0944 NZ_JHDJ01000128.1 Protein Homology CDS 47429 48670 . - 0 ID=cds-WP_001508499.1;Parent=gene-AD08_RS17555;Dbxref=Genbank:WP_001508499.1;Name=WP_001508499.1;gbkey=CDS;gene=clsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308894.1;locus_tag=AD08_RS17555;product=cardiolipin synthase ClsB;protein_id=WP_001508499.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 48667 49428 . - . ID=gene-AD08_RS17550;Name=AD08_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17550;old_locus_tag=AD08_0945 NZ_JHDJ01000128.1 Protein Homology CDS 48667 49428 . - 0 ID=cds-WP_001113348.1;Parent=gene-AD08_RS17550;Dbxref=Genbank:WP_001113348.1;Name=WP_001113348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308895.1;locus_tag=AD08_RS17550;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001113348.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 49561 49971 . + . ID=gene-AD08_RS17545;Name=AD08_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17545;old_locus_tag=AD08_0946 NZ_JHDJ01000128.1 Protein Homology CDS 49561 49971 . + 0 ID=cds-WP_000871982.1;Parent=gene-AD08_RS17545;Dbxref=Genbank:WP_000871982.1;Name=WP_000871982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308896.1;locus_tag=AD08_RS17545;product=hypothetical protein;protein_id=WP_000871982.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 49933 51039 . - . ID=gene-AD08_RS17540;Name=AD08_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17540;old_locus_tag=AD08_0947 NZ_JHDJ01000128.1 Protein Homology CDS 49933 51039 . - 0 ID=cds-WP_000469031.1;Parent=gene-AD08_RS17540;Dbxref=Genbank:WP_000469031.1;Name=WP_000469031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308897.1;locus_tag=AD08_RS17540;product=ABC transporter permease;protein_id=WP_000469031.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 51050 52183 . - . ID=gene-AD08_RS17535;Name=AD08_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17535;old_locus_tag=AD08_0948 NZ_JHDJ01000128.1 Protein Homology CDS 51050 52183 . - 0 ID=cds-WP_000070131.1;Parent=gene-AD08_RS17535;Dbxref=Genbank:WP_000070131.1;Name=WP_000070131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308898.1;locus_tag=AD08_RS17535;product=ABC transporter permease;protein_id=WP_000070131.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 52176 53912 . - . ID=gene-AD08_RS17530;Name=AD08_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17530;old_locus_tag=AD08_0949 NZ_JHDJ01000128.1 Protein Homology CDS 52176 53912 . - 0 ID=cds-WP_032188150.1;Parent=gene-AD08_RS17530;Dbxref=Genbank:WP_032188150.1;Name=WP_032188150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415315.4;locus_tag=AD08_RS17530;product=ABC transporter ATP-binding protein;protein_id=WP_032188150.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 53905 54903 . - . ID=gene-AD08_RS17525;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=AD08_RS17525;old_locus_tag=AD08_0950 NZ_JHDJ01000128.1 Protein Homology CDS 53905 54903 . - 0 ID=cds-WP_000976400.1;Parent=gene-AD08_RS17525;Dbxref=Genbank:WP_000976400.1;Name=WP_000976400.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415316.1;locus_tag=AD08_RS17525;product=secretion protein HlyD;protein_id=WP_000976400.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 54903 55574 . - . ID=gene-AD08_RS17520;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=AD08_RS17520;old_locus_tag=AD08_0951 NZ_JHDJ01000128.1 Protein Homology CDS 54903 55574 . - 0 ID=cds-WP_001296991.1;Parent=gene-AD08_RS17520;Dbxref=Genbank:WP_001296991.1;Name=WP_001296991.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415317.4;locus_tag=AD08_RS17520;product=DNA-binding transcriptional regulator CecR;protein_id=WP_001296991.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 55803 57167 . + . ID=gene-AD08_RS17515;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=AD08_RS17515;old_locus_tag=AD08_0952 NZ_JHDJ01000128.1 Protein Homology CDS 55803 57167 . + 0 ID=cds-WP_000007101.1;Parent=gene-AD08_RS17515;Dbxref=Genbank:WP_000007101.1;Name=WP_000007101.1;gbkey=CDS;gene=rhlE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415318.1;locus_tag=AD08_RS17515;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007101.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 57399 57881 . - . ID=gene-AD08_RS17510;Name=ybiA;gbkey=Gene;gene=ybiA;gene_biotype=protein_coding;locus_tag=AD08_RS17510;old_locus_tag=AD08_0953 NZ_JHDJ01000128.1 Protein Homology CDS 57399 57881 . - 0 ID=cds-WP_001145126.1;Parent=gene-AD08_RS17510;Dbxref=Genbank:WP_001145126.1;Name=WP_001145126.1;gbkey=CDS;gene=ybiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415319.1;locus_tag=AD08_RS17510;product=N-glycosidase YbiA;protein_id=WP_001145126.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 58001 60151 . + . ID=gene-AD08_RS17505;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=AD08_RS17505;old_locus_tag=AD08_0954 NZ_JHDJ01000128.1 Protein Homology CDS 58001 60151 . + 0 ID=cds-WP_001340191.1;Parent=gene-AD08_RS17505;Dbxref=Genbank:WP_001340191.1;Name=WP_001340191.1;gbkey=CDS;gene=dinG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415320.1;locus_tag=AD08_RS17505;product=ATP-dependent DNA helicase DinG;protein_id=WP_001340191.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 60179 61141 . + . ID=gene-AD08_RS17500;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=AD08_RS17500;old_locus_tag=AD08_0955 NZ_JHDJ01000128.1 Protein Homology CDS 60179 61141 . + 0 ID=cds-WP_000386551.1;Parent=gene-AD08_RS17500;Dbxref=Genbank:WP_000386551.1;Name=WP_000386551.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415321.1;locus_tag=AD08_RS17500;product=DNA-binding protein YbiB;protein_id=WP_000386551.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 61282 62367 . + . ID=gene-AD08_RS17495;Name=AD08_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17495;old_locus_tag=AD08_0956 NZ_JHDJ01000128.1 Protein Homology CDS 61282 62367 . + 0 ID=cds-WP_000443530.1;Parent=gene-AD08_RS17495;Dbxref=Genbank:WP_000443530.1;Name=WP_000443530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415322.1;locus_tag=AD08_RS17495;product=hydroxycarboxylate dehydrogenase HcXB;protein_id=WP_000443530.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 62596 62856 . - . ID=gene-AD08_RS17490;Name=AD08_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17490;old_locus_tag=AD08_0957 NZ_JHDJ01000128.1 Protein Homology CDS 62596 62856 . - 0 ID=cds-WP_000849301.1;Parent=gene-AD08_RS17490;Dbxref=Genbank:WP_000849301.1;Name=WP_000849301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415323.1;locus_tag=AD08_RS17490;product=DUF1471 domain-containing protein;protein_id=WP_000849301.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 63121 63387 . - . ID=gene-AD08_RS17485;Name=ybiI;gbkey=Gene;gene=ybiI;gene_biotype=protein_coding;locus_tag=AD08_RS17485;old_locus_tag=AD08_0958 NZ_JHDJ01000128.1 Protein Homology CDS 63121 63387 . - 0 ID=cds-WP_000146343.1;Parent=gene-AD08_RS17485;Dbxref=Genbank:WP_000146343.1;Name=WP_000146343.1;gbkey=CDS;gene=ybiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415324.1;locus_tag=AD08_RS17485;product=C4-type zinc finger protein YbiI;protein_id=WP_000146343.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 63461 64138 . - . ID=gene-AD08_RS17480;Name=ybiX;gbkey=Gene;gene=ybiX;gene_biotype=protein_coding;locus_tag=AD08_RS17480;old_locus_tag=AD08_0959 NZ_JHDJ01000128.1 Protein Homology CDS 63461 64138 . - 0 ID=cds-WP_000990177.1;Parent=gene-AD08_RS17480;Dbxref=Genbank:WP_000990177.1;Name=WP_000990177.1;gbkey=CDS;gene=ybiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415325.4;locus_tag=AD08_RS17480;product=PKHD-type hydroxylase YbiX;protein_id=WP_000990177.1;transl_table=11 NZ_JHDJ01000128.1 RefSeq gene 64340 65407 . - . ID=gene-AD08_RS17475;Name=AD08_RS17475;end_range=65407,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17475;old_locus_tag=AD08_0960;partial=true NZ_JHDJ01000128.1 Protein Homology CDS 64340 65407 . - 0 ID=cds-WP_032217610.1-4;Parent=gene-AD08_RS17475;Dbxref=Genbank:WP_032217610.1;Name=WP_032217610.1;end_range=65407,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS17475;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032217610.1;transl_table=11 ##sequence-region NZ_JHDJ01000129.1 1 7429 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000129.1 RefSeq region 1 7429 . + . ID=NZ_JHDJ01000129.1:1..7429;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000129.1 RefSeq gene 171 1283 . - . ID=gene-AD08_RS17470;Name=AD08_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17470;old_locus_tag=AD08_0961 NZ_JHDJ01000129.1 Protein Homology CDS 171 1283 . - 0 ID=cds-WP_001300563.1-6;Parent=gene-AD08_RS17470;Dbxref=Genbank:WP_001300563.1;Name=WP_001300563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS17470;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 NZ_JHDJ01000129.1 RefSeq gene 1360 3642 . - . ID=gene-AD08_RS17465;Name=AD08_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17465;old_locus_tag=AD08_0962 NZ_JHDJ01000129.1 Protein Homology CDS 1360 3642 . - 0 ID=cds-WP_000430057.1;Parent=gene-AD08_RS17465;Dbxref=Genbank:WP_000430057.1;Name=WP_000430057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415326.1;locus_tag=AD08_RS17465;product=catecholate siderophore receptor Fiu;protein_id=WP_000430057.1;transl_table=11 NZ_JHDJ01000129.1 RefSeq gene 3907 4167 . - . ID=gene-AD08_RS31620;Name=AD08_RS31620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31620;old_locus_tag=AD08_0963 NZ_JHDJ01000129.1 Protein Homology CDS 3907 4167 . - 0 ID=cds-WP_000710619.1;Parent=gene-AD08_RS31620;Dbxref=Genbank:WP_000710619.1;Name=WP_000710619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415327.2;locus_tag=AD08_RS31620;product=DUF1471 domain-containing protein;protein_id=WP_000710619.1;transl_table=11 NZ_JHDJ01000129.1 RefSeq gene 4443 5369 . + . ID=gene-AD08_RS17455;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=AD08_RS17455;old_locus_tag=AD08_0964 NZ_JHDJ01000129.1 Protein Homology CDS 4443 5369 . + 0 ID=cds-WP_032218345.1;Parent=gene-AD08_RS17455;Dbxref=Genbank:WP_032218345.1;Name=WP_032218345.1;gbkey=CDS;gene=rlmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415328.4;locus_tag=AD08_RS17455;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_032218345.1;transl_table=11 NZ_JHDJ01000129.1 RefSeq pseudogene 5366 6979 . - . ID=gene-AD08_RS17450;Name=ybiO;end_range=6979,.;gbkey=Gene;gene=ybiO;gene_biotype=pseudogene;locus_tag=AD08_RS17450;old_locus_tag=AD08_0965;partial=true;pseudo=true NZ_JHDJ01000129.1 Protein Homology CDS 5366 6979 . - 0 ID=cds-AD08_RS17450;Parent=gene-AD08_RS17450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=6979,.;gbkey=CDS;gene=ybiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415329.4;locus_tag=AD08_RS17450;partial=true;product=mechanosensitive channel protein;pseudo=true;transl_table=11 NZ_JHDJ01000129.1 RefSeq pseudogene 6995 7429 . - . ID=gene-AD08_RS31060;Name=AD08_RS31060;end_range=7429,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31060;old_locus_tag=AD08_0966;partial=true;pseudo=true NZ_JHDJ01000129.1 Protein Homology CDS 6995 7429 . - 0 ID=cds-AD08_RS31060;Parent=gene-AD08_RS31060;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7429,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS31060;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000130.1 1 76424 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000130.1 RefSeq region 1 76424 . + . ID=NZ_JHDJ01000130.1:1..76424;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000130.1 RefSeq pseudogene 1 322 . - . ID=gene-AD08_RS0125325;Name=AD08_RS0125325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125325;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000130.1 Protein Homology CDS 1 322 . - 0 ID=cds-AD08_RS0125325;Parent=gene-AD08_RS0125325;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS0125325;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 351 998 . - . ID=gene-AD08_RS17440;Name=AD08_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17440;old_locus_tag=AD08_0968 NZ_JHDJ01000130.1 Protein Homology CDS 351 998 . - 0 ID=cds-WP_032218351.1;Parent=gene-AD08_RS17440;Dbxref=Genbank:WP_032218351.1;Name=WP_032218351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001267230.1;locus_tag=AD08_RS17440;product=hypothetical protein;protein_id=WP_032218351.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 1259 1981 . - . ID=gene-AD08_RS17435;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=AD08_RS17435;old_locus_tag=AD08_0969 NZ_JHDJ01000130.1 Protein Homology CDS 1259 1981 . - 0 ID=cds-WP_032213943.1;Parent=gene-AD08_RS17435;Dbxref=Genbank:WP_032213943.1;Name=WP_032213943.1;gbkey=CDS;gene=glnQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017491583.1;locus_tag=AD08_RS17435;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_032213943.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 1978 2637 . - . ID=gene-AD08_RS17430;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=AD08_RS17430;old_locus_tag=AD08_0970 NZ_JHDJ01000130.1 Protein Homology CDS 1978 2637 . - 0 ID=cds-WP_001159065.1;Parent=gene-AD08_RS17430;Dbxref=Genbank:WP_001159065.1;Name=WP_001159065.1;gbkey=CDS;gene=glnP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=AD08_RS17430;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159065.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 2776 3522 . - . ID=gene-AD08_RS17425;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=AD08_RS17425;old_locus_tag=AD08_0971 NZ_JHDJ01000130.1 Protein Homology CDS 2776 3522 . - 0 ID=cds-WP_000843866.1;Parent=gene-AD08_RS17425;Dbxref=Genbank:WP_000843866.1;Name=WP_000843866.1;gbkey=CDS;gene=glnH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=AD08_RS17425;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000843866.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 3926 4429 . - . ID=gene-AD08_RS17420;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=AD08_RS17420;old_locus_tag=AD08_0972 NZ_JHDJ01000130.1 Protein Homology CDS 3926 4429 . - 0 ID=cds-WP_000100800.1;Parent=gene-AD08_RS17420;Dbxref=Genbank:WP_000100800.1;Name=WP_000100800.1;gbkey=CDS;gene=dps;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=AD08_RS17420;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100800.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 4728 5615 . - . ID=gene-AD08_RS17415;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=AD08_RS17415;old_locus_tag=AD08_0973 NZ_JHDJ01000130.1 Protein Homology CDS 4728 5615 . - 0 ID=cds-WP_001295297.1;Parent=gene-AD08_RS17415;Dbxref=Genbank:WP_001295297.1;Name=WP_001295297.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308918.1;locus_tag=AD08_RS17415;product=threonine/homoserine exporter RhtA;protein_id=WP_001295297.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 5850 5915 . + . ID=gene-AD08_RS31625;Name=AD08_RS31625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31625 NZ_JHDJ01000130.1 Protein Homology CDS 5850 5915 . + 0 ID=cds-WP_120795379.1;Parent=gene-AD08_RS31625;Dbxref=Genbank:WP_120795379.1;Name=WP_120795379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518760.1;locus_tag=AD08_RS31625;product=protein YliM;protein_id=WP_120795379.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 5968 6483 . + . ID=gene-AD08_RS17410;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=AD08_RS17410;old_locus_tag=AD08_0974 NZ_JHDJ01000130.1 Protein Homology CDS 5968 6483 . + 0 ID=cds-WP_001295296.1;Parent=gene-AD08_RS17410;Dbxref=Genbank:WP_001295296.1;Name=WP_001295296.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308919.1;locus_tag=AD08_RS17410;product=outer membrane protein OmpX;protein_id=WP_001295296.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 6532 8115 . - . ID=gene-AD08_RS17405;Name=AD08_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17405;old_locus_tag=AD08_0975 NZ_JHDJ01000130.1 Protein Homology CDS 6532 8115 . - 0 ID=cds-WP_001054678.1;Parent=gene-AD08_RS17405;Dbxref=Genbank:WP_001054678.1;Name=WP_001054678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415336.1;locus_tag=AD08_RS17405;product=phosphoethanolamine transferase;protein_id=WP_001054678.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 8387 8515 . - . ID=gene-AD08_RS17400;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=AD08_RS17400;old_locus_tag=AD08_0976 NZ_JHDJ01000130.1 Protein Homology CDS 8387 8515 . - 0 ID=cds-WP_001001761.1;Parent=gene-AD08_RS17400;Dbxref=Genbank:WP_001001761.1;Name=WP_001001761.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=AD08_RS17400;product=manganase accumulation protein MntS;protein_id=WP_001001761.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 8701 9168 . + . ID=gene-AD08_RS17395;Name=AD08_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17395;old_locus_tag=AD08_0977 NZ_JHDJ01000130.1 Protein Homology CDS 8701 9168 . + 0 ID=cds-WP_000091016.1;Parent=gene-AD08_RS17395;Dbxref=Genbank:WP_000091016.1;Name=WP_000091016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415338.1;locus_tag=AD08_RS17395;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000091016.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 9165 10283 . + . ID=gene-AD08_RS17390;Name=AD08_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17390;old_locus_tag=AD08_0978 NZ_JHDJ01000130.1 Protein Homology CDS 9165 10283 . + 0 ID=cds-WP_000056457.1;Parent=gene-AD08_RS17390;Dbxref=Genbank:WP_000056457.1;Name=WP_000056457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415339.1;locus_tag=AD08_RS17390;product=anion transporter;protein_id=WP_000056457.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 10342 11262 . - . ID=gene-AD08_RS17385;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=AD08_RS17385;old_locus_tag=AD08_0979 NZ_JHDJ01000130.1 Protein Homology CDS 10342 11262 . - 0 ID=cds-WP_001056384.1;Parent=gene-AD08_RS17385;Dbxref=Genbank:WP_001056384.1;Name=WP_001056384.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308923.1;locus_tag=AD08_RS17385;product=L%2CD-transpeptidase;protein_id=WP_001056384.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 11481 13073 . + . ID=gene-AD08_RS17380;Name=AD08_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17380;old_locus_tag=AD08_0980 NZ_JHDJ01000130.1 Protein Homology CDS 11481 13073 . + 0 ID=cds-WP_032218354.1;Parent=gene-AD08_RS17380;Dbxref=Genbank:WP_032218354.1;Name=WP_032218354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308924.1;locus_tag=AD08_RS17380;product=ABC-F family ATPase;protein_id=WP_032218354.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 13314 14579 . - . ID=gene-AD08_RS17375;Name=AD08_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17375;old_locus_tag=AD08_0981 NZ_JHDJ01000130.1 Protein Homology CDS 13314 14579 . - 0 ID=cds-WP_000168797.1;Parent=gene-AD08_RS17375;Dbxref=Genbank:WP_000168797.1;Name=WP_000168797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415342.1;locus_tag=AD08_RS17375;product=DUF1479 domain-containing protein;protein_id=WP_000168797.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 14731 15546 . - . ID=gene-AD08_RS17370;Name=ybiV;gbkey=Gene;gene=ybiV;gene_biotype=protein_coding;locus_tag=AD08_RS17370;old_locus_tag=AD08_0982 NZ_JHDJ01000130.1 Protein Homology CDS 14731 15546 . - 0 ID=cds-WP_000114272.1;Parent=gene-AD08_RS17370;Dbxref=Genbank:WP_000114272.1;Name=WP_000114272.1;gbkey=CDS;gene=ybiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415343.1;locus_tag=AD08_RS17370;product=sugar-phosphatase YbiV;protein_id=WP_000114272.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 15692 18124 . - . ID=gene-AD08_RS17365;Name=AD08_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17365;old_locus_tag=AD08_0983 NZ_JHDJ01000130.1 Protein Homology CDS 15692 18124 . - 0 ID=cds-WP_000209342.1;Parent=gene-AD08_RS17365;Dbxref=Genbank:WP_000209342.1;Name=WP_000209342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415344.1;locus_tag=AD08_RS17365;product=glycyl radical protein;protein_id=WP_000209342.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 18130 19029 . - . ID=gene-AD08_RS17360;Name=AD08_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17360;old_locus_tag=AD08_0984 NZ_JHDJ01000130.1 Protein Homology CDS 18130 19029 . - 0 ID=cds-WP_001295295.1;Parent=gene-AD08_RS17360;Dbxref=Genbank:WP_001295295.1;Name=WP_001295295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415345.2;locus_tag=AD08_RS17360;product=glycyl-radical enzyme activating protein;protein_id=WP_001295295.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 19160 19822 . + . ID=gene-AD08_RS17355;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AD08_RS17355;old_locus_tag=AD08_0985 NZ_JHDJ01000130.1 Protein Homology CDS 19160 19822 . + 0 ID=cds-WP_001336208.1;Parent=gene-AD08_RS17355;Dbxref=Genbank:WP_001336208.1;Name=WP_001336208.1;gbkey=CDS;gene=fsa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415346.4;locus_tag=AD08_RS17355;product=fructose-6-phosphate aldolase;protein_id=WP_001336208.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 19898 20647 . - . ID=gene-AD08_RS17350;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=AD08_RS17350;old_locus_tag=AD08_0986 NZ_JHDJ01000130.1 Protein Homology CDS 19898 20647 . - 0 ID=cds-WP_000829217.1;Parent=gene-AD08_RS17350;Dbxref=Genbank:WP_000829217.1;Name=WP_000829217.1;gbkey=CDS;gene=moeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415347.1;locus_tag=AD08_RS17350;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829217.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 20647 21882 . - . ID=gene-AD08_RS17345;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=AD08_RS17345;old_locus_tag=AD08_0987 NZ_JHDJ01000130.1 Protein Homology CDS 20647 21882 . - 0 ID=cds-WP_000397340.1;Parent=gene-AD08_RS17345;Dbxref=Genbank:WP_000397340.1;Name=WP_000397340.1;gbkey=CDS;gene=moeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415348.1;locus_tag=AD08_RS17345;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000397340.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 22086 23051 . + . ID=gene-AD08_RS17340;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=AD08_RS17340;old_locus_tag=AD08_0988 NZ_JHDJ01000130.1 Protein Homology CDS 22086 23051 . + 0 ID=cds-WP_001394005.1;Parent=gene-AD08_RS17340;Dbxref=Genbank:WP_001394005.1;Name=WP_001394005.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415349.1;locus_tag=AD08_RS17340;product=beta-aspartyl-peptidase;protein_id=WP_001394005.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 23038 24909 . + . ID=gene-AD08_RS17335;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=AD08_RS17335;old_locus_tag=AD08_0989 NZ_JHDJ01000130.1 Protein Homology CDS 23038 24909 . + 0 ID=cds-WP_001301279.1;Parent=gene-AD08_RS17335;Dbxref=Genbank:WP_001301279.1;Name=WP_001301279.1;gbkey=CDS;gene=gsiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415350.2;locus_tag=AD08_RS17335;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001301279.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 24929 26467 . + . ID=gene-AD08_RS17330;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=AD08_RS17330;old_locus_tag=AD08_0990 NZ_JHDJ01000130.1 Protein Homology CDS 24929 26467 . + 0 ID=cds-WP_032218357.1;Parent=gene-AD08_RS17330;Dbxref=Genbank:WP_032218357.1;Name=WP_032218357.1;gbkey=CDS;gene=gsiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415351.1;locus_tag=AD08_RS17330;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_032218357.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 26485 27405 . + . ID=gene-AD08_RS17325;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=AD08_RS17325;old_locus_tag=AD08_0991 NZ_JHDJ01000130.1 Protein Homology CDS 26485 27405 . + 0 ID=cds-WP_000936043.1;Parent=gene-AD08_RS17325;Dbxref=Genbank:WP_000936043.1;Name=WP_000936043.1;gbkey=CDS;gene=gsiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415352.1;locus_tag=AD08_RS17325;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936043.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 27408 28319 . + . ID=gene-AD08_RS17320;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=AD08_RS17320;old_locus_tag=AD08_0992 NZ_JHDJ01000130.1 Protein Homology CDS 27408 28319 . + 0 ID=cds-WP_001236051.1;Parent=gene-AD08_RS17320;Dbxref=Genbank:WP_001236051.1;Name=WP_001236051.1;gbkey=CDS;gene=gsiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001236035.1;locus_tag=AD08_RS17320;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236051.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 28497 30845 . + . ID=gene-AD08_RS17315;Name=AD08_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17315;old_locus_tag=AD08_0993 NZ_JHDJ01000130.1 Protein Homology CDS 28497 30845 . + 0 ID=cds-WP_001360263.1;Parent=gene-AD08_RS17315;Dbxref=Genbank:WP_001360263.1;Name=WP_001360263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415354.1;locus_tag=AD08_RS17315;product=EAL domain-containing protein;protein_id=WP_001360263.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 30853 32181 . + . ID=gene-AD08_RS17310;Name=AD08_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17310;old_locus_tag=AD08_0994 NZ_JHDJ01000130.1 Protein Homology CDS 30853 32181 . + 0 ID=cds-WP_000086904.1;Parent=gene-AD08_RS17310;Dbxref=Genbank:WP_000086904.1;Name=WP_000086904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415355.1;locus_tag=AD08_RS17310;product=GGDEF domain-containing protein;protein_id=WP_000086904.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 32228 33553 . - . ID=gene-AD08_RS17305;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=AD08_RS17305;old_locus_tag=AD08_0995 NZ_JHDJ01000130.1 Protein Homology CDS 32228 33553 . - 0 ID=cds-WP_000049367.1;Parent=gene-AD08_RS17305;Dbxref=Genbank:WP_000049367.1;Name=WP_000049367.1;gbkey=CDS;gene=rimO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308942.1;locus_tag=AD08_RS17305;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000049367.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 33766 34149 . + . ID=gene-AD08_RS17300;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=AD08_RS17300;old_locus_tag=AD08_0996 NZ_JHDJ01000130.1 Protein Homology CDS 33766 34149 . + 0 ID=cds-WP_000497137.1;Parent=gene-AD08_RS17300;Dbxref=Genbank:WP_000497137.1;Name=WP_000497137.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308943.1;locus_tag=AD08_RS17300;product=biofilm formation regulator BssR;protein_id=WP_000497137.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 34260 35375 . + . ID=gene-AD08_RS17295;Name=AD08_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17295;old_locus_tag=AD08_0997 NZ_JHDJ01000130.1 Protein Homology CDS 34260 35375 . + 0 ID=cds-WP_000555031.1;Parent=gene-AD08_RS17295;Dbxref=Genbank:WP_000555031.1;Name=WP_000555031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415358.1;locus_tag=AD08_RS17295;product=aldose sugar dehydrogenase YliI;protein_id=WP_000555031.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 35372 35998 . - . ID=gene-AD08_RS17290;Name=AD08_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17290;old_locus_tag=AD08_0998 NZ_JHDJ01000130.1 Protein Homology CDS 35372 35998 . - 0 ID=cds-WP_001295292.1;Parent=gene-AD08_RS17290;Dbxref=Genbank:WP_001295292.1;Name=WP_001295292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308945.2;locus_tag=AD08_RS17290;product=glutathione S-transferase GstB;protein_id=WP_001295292.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 36245 37447 . + . ID=gene-AD08_RS17285;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=AD08_RS17285;old_locus_tag=AD08_0999 NZ_JHDJ01000130.1 Protein Homology CDS 36245 37447 . + 0 ID=cds-WP_001300708.1;Parent=gene-AD08_RS17285;Dbxref=Genbank:WP_001300708.1;Name=WP_001300708.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415360.1;locus_tag=AD08_RS17285;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001300708.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 37494 38252 . - . ID=gene-AD08_RS17280;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=AD08_RS17280;old_locus_tag=AD08_1000 NZ_JHDJ01000130.1 Protein Homology CDS 37494 38252 . - 0 ID=cds-WP_000450121.1;Parent=gene-AD08_RS17280;Dbxref=Genbank:WP_000450121.1;Name=WP_000450121.1;gbkey=CDS;gene=deoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308947.1;locus_tag=AD08_RS17280;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450121.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 38310 38906 . - . ID=gene-AD08_RS17275;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=AD08_RS17275;old_locus_tag=AD08_1001 NZ_JHDJ01000130.1 Protein Homology CDS 38310 38906 . - 0 ID=cds-WP_001295291.1;Parent=gene-AD08_RS17275;Dbxref=Genbank:WP_001295291.1;Name=WP_001295291.1;gbkey=CDS;gene=ybjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415362.1;locus_tag=AD08_RS17275;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001295291.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 39191 40423 . + . ID=gene-AD08_RS17270;Name=mdfA;gbkey=Gene;gene=mdfA;gene_biotype=protein_coding;locus_tag=AD08_RS17270;old_locus_tag=AD08_1002 NZ_JHDJ01000130.1 Protein Homology CDS 39191 40423 . + 0 ID=cds-WP_032218362.1;Parent=gene-AD08_RS17270;Dbxref=Genbank:WP_032218362.1;Name=WP_032218362.1;gbkey=CDS;gene=mdfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308949.1;locus_tag=AD08_RS17270;product=multidrug efflux MFS transporter MdfA;protein_id=WP_032218362.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 40464 40748 . - . ID=gene-AD08_RS17265;Name=AD08_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17265;old_locus_tag=AD08_1003 NZ_JHDJ01000130.1 Protein Homology CDS 40464 40748 . - 0 ID=cds-WP_000605480.1;Parent=gene-AD08_RS17265;Dbxref=Genbank:WP_000605480.1;Name=WP_000605480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415364.1;locus_tag=AD08_RS17265;product=hypothetical protein;protein_id=WP_000605480.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 40834 41649 . - . ID=gene-AD08_RS17260;Name=ybjI;gbkey=Gene;gene=ybjI;gene_biotype=protein_coding;locus_tag=AD08_RS17260;old_locus_tag=AD08_1004 NZ_JHDJ01000130.1 Protein Homology CDS 40834 41649 . - 0 ID=cds-WP_001396996.1;Parent=gene-AD08_RS17260;Dbxref=Genbank:WP_001396996.1;Name=WP_001396996.1;gbkey=CDS;gene=ybjI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415365.4;locus_tag=AD08_RS17260;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase;protein_id=WP_001396996.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 41649 42857 . - . ID=gene-AD08_RS17255;Name=AD08_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17255;old_locus_tag=AD08_1005 NZ_JHDJ01000130.1 Protein Homology CDS 41649 42857 . - 0 ID=cds-WP_000217859.1;Parent=gene-AD08_RS17255;Dbxref=Genbank:WP_000217859.1;Name=WP_000217859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415366.1;locus_tag=AD08_RS17255;product=MFS transporter;protein_id=WP_000217859.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 42941 43477 . + . ID=gene-AD08_RS17250;Name=AD08_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17250;old_locus_tag=AD08_1006 NZ_JHDJ01000130.1 Protein Homology CDS 42941 43477 . + 0 ID=cds-WP_001295289.1;Parent=gene-AD08_RS17250;Dbxref=Genbank:WP_001295289.1;Name=WP_001295289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415367.1;locus_tag=AD08_RS17250;product=DNA-binding transcriptional regulator RcdA;protein_id=WP_001295289.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 43652 45337 . - . ID=gene-AD08_RS17245;Name=AD08_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17245;old_locus_tag=AD08_1007 NZ_JHDJ01000130.1 Protein Homology CDS 43652 45337 . - 0 ID=cds-WP_001024876.1;Parent=gene-AD08_RS17245;Dbxref=Genbank:WP_001024876.1;Name=WP_001024876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=AD08_RS17245;product=aspartate:alanine antiporter;protein_id=WP_001024876.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 45607 45984 . + . ID=gene-AD08_RS17240;Name=AD08_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17240;old_locus_tag=AD08_1008 NZ_JHDJ01000130.1 Protein Homology CDS 45607 45984 . + 0 ID=cds-WP_000681108.1;Parent=gene-AD08_RS17240;Dbxref=Genbank:WP_000681108.1;Name=WP_000681108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308955.1;locus_tag=AD08_RS17240;product=hypothetical protein;protein_id=WP_000681108.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 46014 46271 . - . ID=gene-AD08_RS17235;Name=grxA;gbkey=Gene;gene=grxA;gene_biotype=protein_coding;locus_tag=AD08_RS17235;old_locus_tag=AD08_1009 NZ_JHDJ01000130.1 Protein Homology CDS 46014 46271 . - 0 ID=cds-WP_001195240.1;Parent=gene-AD08_RS17235;Dbxref=Genbank:WP_001195240.1;Name=WP_001195240.1;gbkey=CDS;gene=grxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415370.1;locus_tag=AD08_RS17235;product=glutaredoxin 1;protein_id=WP_001195240.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 46431 46718 . + . ID=gene-AD08_RS17230;Name=AD08_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17230;old_locus_tag=AD08_1010 NZ_JHDJ01000130.1 Protein Homology CDS 46431 46718 . + 0 ID=cds-WP_001201560.1;Parent=gene-AD08_RS17230;Dbxref=Genbank:WP_001201560.1;Name=WP_001201560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415371.1;locus_tag=AD08_RS17230;product=DUF1418 family protein;protein_id=WP_001201560.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 46702 47424 . + . ID=gene-AD08_RS17225;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=AD08_RS17225;old_locus_tag=AD08_1011 NZ_JHDJ01000130.1 Protein Homology CDS 46702 47424 . + 0 ID=cds-WP_032218365.1;Parent=gene-AD08_RS17225;Dbxref=Genbank:WP_032218365.1;Name=WP_032218365.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415372.1;locus_tag=AD08_RS17225;product=nitroreductase NfsA;protein_id=WP_032218365.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 47485 48387 . + . ID=gene-AD08_RS17220;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=AD08_RS17220;old_locus_tag=AD08_1012 NZ_JHDJ01000130.1 Protein Homology CDS 47485 48387 . + 0 ID=cds-WP_000684321.1;Parent=gene-AD08_RS17220;Dbxref=Genbank:WP_000684321.1;Name=WP_000684321.1;gbkey=CDS;gene=rimK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308959.1;locus_tag=AD08_RS17220;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684321.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 48475 48951 . + . ID=gene-AD08_RS17215;Name=AD08_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17215;old_locus_tag=AD08_1013 NZ_JHDJ01000130.1 Protein Homology CDS 48475 48951 . + 0 ID=cds-WP_000203025.1;Parent=gene-AD08_RS17215;Dbxref=Genbank:WP_000203025.1;Name=WP_000203025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308960.1;locus_tag=AD08_RS17215;product=YbjN domain-containing protein;protein_id=WP_000203025.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 49302 50414 . + . ID=gene-AD08_RS17205;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=AD08_RS17205;old_locus_tag=AD08_1016 NZ_JHDJ01000130.1 Protein Homology CDS 49302 50414 . + 0 ID=cds-WP_000126072.1;Parent=gene-AD08_RS17205;Dbxref=Genbank:WP_000126072.1;Name=WP_000126072.1;gbkey=CDS;gene=potF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415375.1;locus_tag=AD08_RS17205;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000126072.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 50509 51642 . + . ID=gene-AD08_RS17200;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=AD08_RS17200;old_locus_tag=AD08_1017 NZ_JHDJ01000130.1 Protein Homology CDS 50509 51642 . + 0 ID=cds-WP_000996005.1;Parent=gene-AD08_RS17200;Dbxref=Genbank:WP_000996005.1;Name=WP_000996005.1;gbkey=CDS;gene=potG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=AD08_RS17200;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_000996005.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 51652 52605 . + . ID=gene-AD08_RS17195;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=AD08_RS17195;old_locus_tag=AD08_1018 NZ_JHDJ01000130.1 Protein Homology CDS 51652 52605 . + 0 ID=cds-WP_000105430.1;Parent=gene-AD08_RS17195;Dbxref=Genbank:WP_000105430.1;Name=WP_000105430.1;gbkey=CDS;gene=potH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415377.1;locus_tag=AD08_RS17195;product=putrescine ABC transporter permease PotH;protein_id=WP_000105430.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 52602 53447 . + . ID=gene-AD08_RS17190;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=AD08_RS17190;old_locus_tag=AD08_1019 NZ_JHDJ01000130.1 Protein Homology CDS 52602 53447 . + 0 ID=cds-WP_001061658.1;Parent=gene-AD08_RS17190;Dbxref=Genbank:WP_001061658.1;Name=WP_001061658.1;gbkey=CDS;gene=potI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415378.1;locus_tag=AD08_RS17190;product=putrescine ABC transporter permease PotI;protein_id=WP_001061658.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 53507 53995 . + . ID=gene-AD08_RS17185;Name=AD08_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17185;old_locus_tag=AD08_1020 NZ_JHDJ01000130.1 Protein Homology CDS 53507 53995 . + 0 ID=cds-WP_000389260.1;Parent=gene-AD08_RS17185;Dbxref=Genbank:WP_000389260.1;Name=WP_000389260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308965.1;locus_tag=AD08_RS17185;product=YbjO family protein;protein_id=WP_000389260.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 54036 55163 . + . ID=gene-AD08_RS17180;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=AD08_RS17180;old_locus_tag=AD08_1021 NZ_JHDJ01000130.1 Protein Homology CDS 54036 55163 . + 0 ID=cds-WP_032218368.1;Parent=gene-AD08_RS17180;Dbxref=Genbank:WP_032218368.1;Name=WP_032218368.1;gbkey=CDS;gene=rlmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415380.1;locus_tag=AD08_RS17180;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_032218368.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 55362 56093 . - . ID=gene-AD08_RS17175;Name=AD08_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17175;old_locus_tag=AD08_1022 NZ_JHDJ01000130.1 Protein Homology CDS 55362 56093 . - 0 ID=cds-WP_001295339.1;Parent=gene-AD08_RS17175;Dbxref=Genbank:WP_001295339.1;Name=WP_001295339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415381.1;locus_tag=AD08_RS17175;product=arginine ABC transporter substrate-binding protein;protein_id=WP_001295339.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 56384 57052 . - . ID=gene-AD08_RS17170;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=AD08_RS17170;old_locus_tag=AD08_1023 NZ_JHDJ01000130.1 Protein Homology CDS 56384 57052 . - 0 ID=cds-WP_000464484.1;Parent=gene-AD08_RS17170;Dbxref=Genbank:WP_000464484.1;Name=WP_000464484.1;gbkey=CDS;gene=artM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308971.1;locus_tag=AD08_RS17170;product=arginine ABC transporter permease ArtM;protein_id=WP_000464484.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 57052 57768 . - . ID=gene-AD08_RS17165;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=AD08_RS17165;old_locus_tag=AD08_1024 NZ_JHDJ01000130.1 Protein Homology CDS 57052 57768 . - 0 ID=cds-WP_001001691.1;Parent=gene-AD08_RS17165;Dbxref=Genbank:WP_001001691.1;Name=WP_001001691.1;gbkey=CDS;gene=artQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415383.1;locus_tag=AD08_RS17165;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001691.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 57775 58506 . - . ID=gene-AD08_RS17160;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=AD08_RS17160;old_locus_tag=AD08_1025 NZ_JHDJ01000130.1 Protein Homology CDS 57775 58506 . - 0 ID=cds-WP_000756569.1;Parent=gene-AD08_RS17160;Dbxref=Genbank:WP_000756569.1;Name=WP_000756569.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415384.1;locus_tag=AD08_RS17160;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000756569.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 58524 59252 . - . ID=gene-AD08_RS17155;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=AD08_RS17155;old_locus_tag=AD08_1026 NZ_JHDJ01000130.1 Protein Homology CDS 58524 59252 . - 0 ID=cds-WP_000027205.1;Parent=gene-AD08_RS17155;Dbxref=Genbank:WP_000027205.1;Name=WP_000027205.1;gbkey=CDS;gene=artP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308974.1;locus_tag=AD08_RS17155;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027205.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 59470 59985 . - . ID=gene-AD08_RS17150;Name=AD08_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17150;old_locus_tag=AD08_1027 NZ_JHDJ01000130.1 Protein Homology CDS 59470 59985 . - 0 ID=cds-WP_001398834.1;Parent=gene-AD08_RS17150;Dbxref=Genbank:WP_001398834.1;Name=WP_001398834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415386.1;locus_tag=AD08_RS17150;product=lipoprotein;protein_id=WP_001398834.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 60111 60434 . + . ID=gene-AD08_RS17145;Name=AD08_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17145;old_locus_tag=AD08_1028 NZ_JHDJ01000130.1 Protein Homology CDS 60111 60434 . + 0 ID=cds-WP_001160737.1;Parent=gene-AD08_RS17145;Dbxref=Genbank:WP_001160737.1;Name=WP_001160737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308979.1;locus_tag=AD08_RS17145;product=heavy metal-binding domain-containing protein;protein_id=WP_001160737.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 60431 61261 . + . ID=gene-AD08_RS17140;Name=AD08_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17140;old_locus_tag=AD08_1029 NZ_JHDJ01000130.1 Protein Homology CDS 60431 61261 . + 0 ID=cds-WP_001252135.1;Parent=gene-AD08_RS17140;Dbxref=Genbank:WP_001252135.1;Name=WP_001252135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415388.1;locus_tag=AD08_RS17140;product=N-acetylmuramoyl-L-alanine amidase AmiD;protein_id=WP_001252135.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 61258 62271 . - . ID=gene-AD08_RS17135;Name=AD08_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17135;old_locus_tag=AD08_1030 NZ_JHDJ01000130.1 Protein Homology CDS 61258 62271 . - 0 ID=cds-WP_001338420.1;Parent=gene-AD08_RS17135;Dbxref=Genbank:WP_001338420.1;Name=WP_001338420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415389.2;locus_tag=AD08_RS17135;product=NAD(P)-dependent oxidoreductase;protein_id=WP_001338420.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 62370 63800 . - . ID=gene-AD08_RS17130;Name=AD08_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17130;old_locus_tag=AD08_1031 NZ_JHDJ01000130.1 Protein Homology CDS 62370 63800 . - 0 ID=cds-WP_001372582.1;Parent=gene-AD08_RS17130;Dbxref=Genbank:WP_001372582.1;Name=WP_001372582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415390.4;locus_tag=AD08_RS17130;product=SDR family oxidoreductase;protein_id=WP_001372582.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 63811 64812 . - . ID=gene-AD08_RS17125;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=AD08_RS17125;old_locus_tag=AD08_1032 NZ_JHDJ01000130.1 Protein Homology CDS 63811 64812 . - 0 ID=cds-WP_000566376.1;Parent=gene-AD08_RS17125;Dbxref=Genbank:WP_000566376.1;Name=WP_000566376.1;gbkey=CDS;gene=ltaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415391.1;locus_tag=AD08_RS17125;product=low-specificity L-threonine aldolase;protein_id=WP_000566376.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 64849 66567 . - . ID=gene-AD08_RS17120;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=AD08_RS17120;old_locus_tag=AD08_1033 NZ_JHDJ01000130.1 Protein Homology CDS 64849 66567 . - 0 ID=cds-WP_032218371.1;Parent=gene-AD08_RS17120;Dbxref=Genbank:WP_032218371.1;Name=WP_032218371.1;gbkey=CDS;gene=poxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532507.1;locus_tag=AD08_RS17120;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_032218371.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 66700 67668 . - . ID=gene-AD08_RS17115;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=AD08_RS17115;old_locus_tag=AD08_1034 NZ_JHDJ01000130.1 Protein Homology CDS 66700 67668 . - 0 ID=cds-WP_000178677.1;Parent=gene-AD08_RS17115;Dbxref=Genbank:WP_000178677.1;Name=WP_000178677.1;gbkey=CDS;gene=hcr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001522746.1;locus_tag=AD08_RS17115;product=NADH oxidoreductase;protein_id=WP_000178677.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 67680 69332 . - . ID=gene-AD08_RS17110;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=AD08_RS17110;old_locus_tag=AD08_1035 NZ_JHDJ01000130.1 Protein Homology CDS 67680 69332 . - 0 ID=cds-WP_000458809.1;Parent=gene-AD08_RS17110;Dbxref=Genbank:WP_000458809.1;Name=WP_000458809.1;gbkey=CDS;gene=hcp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415394.4;locus_tag=AD08_RS17110;product=hydroxylamine reductase;protein_id=WP_000458809.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 69476 70375 . - . ID=gene-AD08_RS17105;Name=lysO;gbkey=Gene;gene=lysO;gene_biotype=protein_coding;locus_tag=AD08_RS17105;old_locus_tag=AD08_1036 NZ_JHDJ01000130.1 Protein Homology CDS 69476 70375 . - 0 ID=cds-WP_000491142.1;Parent=gene-AD08_RS17105;Dbxref=Genbank:WP_000491142.1;Name=WP_000491142.1;gbkey=CDS;gene=lysO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415395.2;locus_tag=AD08_RS17105;product=L-lysine exporter LysO;protein_id=WP_000491142.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 70870 71565 . - . ID=gene-AD08_RS17100;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=AD08_RS17100;old_locus_tag=AD08_1037 NZ_JHDJ01000130.1 Protein Homology CDS 70870 71565 . - 0 ID=cds-WP_001298299.1;Parent=gene-AD08_RS17100;Dbxref=Genbank:WP_001298299.1;Name=WP_001298299.1;gbkey=CDS;gene=aqpZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415396.1;locus_tag=AD08_RS17100;product=aquaporin Z;protein_id=WP_001298299.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 71991 73649 . + . ID=gene-AD08_RS17095;Name=AD08_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17095;old_locus_tag=AD08_1038 NZ_JHDJ01000130.1 Protein Homology CDS 71991 73649 . + 0 ID=cds-WP_000599802.1;Parent=gene-AD08_RS17095;Dbxref=Genbank:WP_000599802.1;Name=WP_000599802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415397.1;locus_tag=AD08_RS17095;product=ATP-dependent endonuclease;protein_id=WP_000599802.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 73646 74602 . - . ID=gene-AD08_RS17090;Name=AD08_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17090;old_locus_tag=AD08_1039 NZ_JHDJ01000130.1 Protein Homology CDS 73646 74602 . - 0 ID=cds-WP_001380339.1;Parent=gene-AD08_RS17090;Dbxref=Genbank:WP_001380339.1;Name=WP_001380339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322270.1;locus_tag=AD08_RS17090;product=DUF535 domain-containing protein;protein_id=WP_001380339.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 74753 75040 . + . ID=gene-AD08_RS0125345;Name=AD08_RS0125345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125345 NZ_JHDJ01000130.1 Protein Homology CDS 74753 75040 . + 0 ID=cds-WP_077699008.1;Parent=gene-AD08_RS0125345;Dbxref=Genbank:WP_077699008.1;Name=WP_077699008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000746305.1;locus_tag=AD08_RS0125345;product=macA domain protein;protein_id=WP_077699008.1;transl_table=11 NZ_JHDJ01000130.1 RefSeq gene 75090 76424 . + . ID=gene-AD08_RS17085;Name=AD08_RS17085;end_range=76424,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17085;old_locus_tag=AD08_1041;partial=true NZ_JHDJ01000130.1 Protein Homology CDS 75090 76424 . + 0 ID=cds-WP_032171013.1-3;Parent=gene-AD08_RS17085;Dbxref=Genbank:WP_032171013.1;Name=WP_032171013.1;end_range=76424,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AD08_RS17085;partial=true;product=IS4-like element IS4 family transposase;protein_id=WP_032171013.1;transl_table=11 ##sequence-region NZ_JHDJ01000131.1 1 43479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000131.1 RefSeq region 1 43479 . + . ID=NZ_JHDJ01000131.1:1..43479;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000131.1 RefSeq gene 49 1395 . + . ID=gene-AD08_RS17080;Name=AD08_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17080;old_locus_tag=AD08_1042 NZ_JHDJ01000131.1 Protein Homology CDS 49 1395 . + 0 ID=cds-WP_000483767.1-2;Parent=gene-AD08_RS17080;Dbxref=Genbank:WP_000483767.1;Name=WP_000483767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AD08_RS17080;product=IS4-like element IS4 family transposase;protein_id=WP_000483767.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq pseudogene 1409 2266 . + . ID=gene-AD08_RS17075;Name=macA;gbkey=Gene;gene=macA;gene_biotype=pseudogene;locus_tag=AD08_RS17075;old_locus_tag=AD08_1043;partial=true;pseudo=true;start_range=.,1409 NZ_JHDJ01000131.1 Protein Homology CDS 1409 2266 . + 0 ID=cds-AD08_RS17075;Parent=gene-AD08_RS17075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=macA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415399.4;locus_tag=AD08_RS17075;partial=true;product=macrolide transporter subunit MacA;pseudo=true;start_range=.,1409;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 2263 4209 . + . ID=gene-AD08_RS17070;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=AD08_RS17070;old_locus_tag=AD08_1044 NZ_JHDJ01000131.1 Protein Homology CDS 2263 4209 . + 0 ID=cds-WP_000188144.1;Parent=gene-AD08_RS17070;Dbxref=Genbank:WP_000188144.1;Name=WP_000188144.1;gbkey=CDS;gene=macB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415400.1;locus_tag=AD08_RS17070;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_000188144.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 4282 4506 . - . ID=gene-AD08_RS17065;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=AD08_RS17065;old_locus_tag=AD08_1045 NZ_JHDJ01000131.1 Protein Homology CDS 4282 4506 . - 0 ID=cds-WP_000410785.1;Parent=gene-AD08_RS17065;Dbxref=Genbank:WP_000410785.1;Name=WP_000410785.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308993.1;locus_tag=AD08_RS17065;product=cold shock-like protein CspD;protein_id=WP_000410785.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 4829 5149 . + . ID=gene-AD08_RS17060;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=AD08_RS17060;old_locus_tag=AD08_1046 NZ_JHDJ01000131.1 Protein Homology CDS 4829 5149 . + 0 ID=cds-WP_000520781.1;Parent=gene-AD08_RS17060;Dbxref=Genbank:WP_000520781.1;Name=WP_000520781.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=AD08_RS17060;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520781.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 5180 7456 . + . ID=gene-AD08_RS17055;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=AD08_RS17055;old_locus_tag=AD08_1047 NZ_JHDJ01000131.1 Protein Homology CDS 5180 7456 . + 0 ID=cds-WP_000934041.1;Parent=gene-AD08_RS17055;Dbxref=Genbank:WP_000934041.1;Name=WP_000934041.1;gbkey=CDS;gene=clpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308995.1;locus_tag=AD08_RS17055;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934041.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 7800 7887 . - . ID=gene-AD08_RS17050;Name=AD08_RS17050;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS17050;old_locus_tag=AD08_1048 NZ_JHDJ01000131.1 tRNAscan-SE tRNA 7800 7887 . - . ID=rna-AD08_RS17050;Parent=gene-AD08_RS17050;anticodon=(pos:complement(7851..7853));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS17050;product=tRNA-Ser NZ_JHDJ01000131.1 tRNAscan-SE exon 7800 7887 . - . ID=exon-AD08_RS17050-1;Parent=rna-AD08_RS17050;anticodon=(pos:complement(7851..7853));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS17050;product=tRNA-Ser NZ_JHDJ01000131.1 RefSeq gene 8141 8359 . - . ID=gene-AD08_RS17045;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=AD08_RS17045;old_locus_tag=AD08_1049 NZ_JHDJ01000131.1 Protein Homology CDS 8141 8359 . - 0 ID=cds-WP_001040187.1;Parent=gene-AD08_RS17045;Dbxref=Genbank:WP_001040187.1;Name=WP_001040187.1;gbkey=CDS;gene=infA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=AD08_RS17045;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 8644 9348 . - . ID=gene-AD08_RS17040;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=AD08_RS17040;old_locus_tag=AD08_1050 NZ_JHDJ01000131.1 Protein Homology CDS 8644 9348 . - 0 ID=cds-WP_032218375.1;Parent=gene-AD08_RS17040;Dbxref=Genbank:WP_032218375.1;Name=WP_032218375.1;gbkey=CDS;gene=aat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415405.1;locus_tag=AD08_RS17040;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_032218375.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 9390 11111 . - . ID=gene-AD08_RS17035;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=AD08_RS17035;old_locus_tag=AD08_1051 NZ_JHDJ01000131.1 Protein Homology CDS 9390 11111 . - 0 ID=cds-WP_001202175.1;Parent=gene-AD08_RS17035;Dbxref=Genbank:WP_001202175.1;Name=WP_001202175.1;gbkey=CDS;gene=cydC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415406.1;locus_tag=AD08_RS17035;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202175.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 11112 12878 . - . ID=gene-AD08_RS17030;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=AD08_RS17030;old_locus_tag=AD08_1052 NZ_JHDJ01000131.1 Protein Homology CDS 11112 12878 . - 0 ID=cds-WP_001043598.1;Parent=gene-AD08_RS17030;Dbxref=Genbank:WP_001043598.1;Name=WP_001043598.1;gbkey=CDS;gene=cydD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415407.1;locus_tag=AD08_RS17030;product=cysteine/glutathione ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001043598.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 13001 13966 . - . ID=gene-AD08_RS17025;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=AD08_RS17025;old_locus_tag=AD08_1053 NZ_JHDJ01000131.1 Protein Homology CDS 13001 13966 . - 0 ID=cds-WP_000537418.1;Parent=gene-AD08_RS17025;Dbxref=Genbank:WP_000537418.1;Name=WP_000537418.1;gbkey=CDS;gene=trxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309000.1;locus_tag=AD08_RS17025;product=thioredoxin-disulfide reductase;protein_id=WP_000537418.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 14511 15005 . + . ID=gene-AD08_RS17020;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=AD08_RS17020;old_locus_tag=AD08_1055 NZ_JHDJ01000131.1 Protein Homology CDS 14511 15005 . + 0 ID=cds-WP_000228473.1;Parent=gene-AD08_RS17020;Dbxref=Genbank:WP_000228473.1;Name=WP_000228473.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=AD08_RS17020;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228473.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 15140 19129 . + . ID=gene-AD08_RS17015;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=AD08_RS17015;old_locus_tag=AD08_1056 NZ_JHDJ01000131.1 Protein Homology CDS 15140 19129 . + 0 ID=cds-WP_000077038.1;Parent=gene-AD08_RS17015;Dbxref=Genbank:WP_000077038.1;Name=WP_000077038.1;gbkey=CDS;gene=ftsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415410.1;locus_tag=AD08_RS17015;product=DNA translocase FtsK;protein_id=WP_000077038.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 19288 19899 . + . ID=gene-AD08_RS17010;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=AD08_RS17010;old_locus_tag=AD08_1057 NZ_JHDJ01000131.1 Protein Homology CDS 19288 19899 . + 0 ID=cds-WP_001372611.1;Parent=gene-AD08_RS17010;Dbxref=Genbank:WP_001372611.1;Name=WP_001372611.1;gbkey=CDS;gene=lolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=AD08_RS17010;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001372611.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 19910 21253 . + . ID=gene-AD08_RS17005;Name=AD08_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS17005;old_locus_tag=AD08_1058 NZ_JHDJ01000131.1 Protein Homology CDS 19910 21253 . + 0 ID=cds-WP_032218376.1;Parent=gene-AD08_RS17005;Dbxref=Genbank:WP_032218376.1;Name=WP_032218376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309004.1;locus_tag=AD08_RS17005;product=replication-associated recombination protein RarA;protein_id=WP_032218376.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 21344 22636 . + . ID=gene-AD08_RS17000;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=AD08_RS17000;old_locus_tag=AD08_1059 NZ_JHDJ01000131.1 Protein Homology CDS 21344 22636 . + 0 ID=cds-WP_000886683.1;Parent=gene-AD08_RS17000;Dbxref=Genbank:WP_000886683.1;Name=WP_000886683.1;gbkey=CDS;gene=serS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=AD08_RS17000;product=serine--tRNA ligase;protein_id=WP_000886683.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 22875 25319 . + . ID=gene-AD08_RS16995;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=AD08_RS16995;old_locus_tag=AD08_1060 NZ_JHDJ01000131.1 Protein Homology CDS 22875 25319 . + 0 ID=cds-WP_001646904.1;Parent=gene-AD08_RS16995;Dbxref=Genbank:WP_001646904.1;Name=WP_001646904.1;gbkey=CDS;gene=dmsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415414.4;locus_tag=AD08_RS16995;product=dimethylsulfoxide reductase subunit A;protein_id=WP_001646904.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 25330 25947 . + . ID=gene-AD08_RS16990;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=AD08_RS16990;old_locus_tag=AD08_1061 NZ_JHDJ01000131.1 Protein Homology CDS 25330 25947 . + 0 ID=cds-WP_000213098.1;Parent=gene-AD08_RS16990;Dbxref=Genbank:WP_000213098.1;Name=WP_000213098.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AD08_RS16990;product=dimethylsulfoxide reductase subunit B;protein_id=WP_000213098.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 25949 26812 . + . ID=gene-AD08_RS16985;Name=AD08_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16985;old_locus_tag=AD08_1062 NZ_JHDJ01000131.1 Protein Homology CDS 25949 26812 . + 0 ID=cds-WP_000534637.1;Parent=gene-AD08_RS16985;Dbxref=Genbank:WP_000534637.1;Name=WP_000534637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415416.1;locus_tag=AD08_RS16985;product=dimethyl sulfoxide reductase anchor subunit DmsC;protein_id=WP_000534637.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 26847 27473 . - . ID=gene-AD08_RS16980;Name=AD08_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16980;old_locus_tag=AD08_1063 NZ_JHDJ01000131.1 Protein Homology CDS 26847 27473 . - 0 ID=cds-WP_000165879.1;Parent=gene-AD08_RS16980;Dbxref=Genbank:WP_000165879.1;Name=WP_000165879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415417.1;locus_tag=AD08_RS16980;product=hydrolase;protein_id=WP_000165879.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 27787 28935 . + . ID=gene-AD08_RS16975;Name=AD08_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16975;old_locus_tag=AD08_1065 NZ_JHDJ01000131.1 Protein Homology CDS 27787 28935 . + 0 ID=cds-WP_000109259.1;Parent=gene-AD08_RS16975;Dbxref=Genbank:WP_000109259.1;Name=WP_000109259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415418.1;locus_tag=AD08_RS16975;product=MFS transporter;protein_id=WP_000109259.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 29145 30575 . + . ID=gene-AD08_RS16970;Name=AD08_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16970;old_locus_tag=AD08_1066 NZ_JHDJ01000131.1 Protein Homology CDS 29145 30575 . + 0 ID=cds-WP_032218378.1;Parent=gene-AD08_RS16970;Dbxref=Genbank:WP_032218378.1;Name=WP_032218378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415419.2;locus_tag=AD08_RS16970;product=amino acid permease;protein_id=WP_032218378.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 30576 31484 . - . ID=gene-AD08_RS16965;Name=AD08_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16965;old_locus_tag=AD08_1067 NZ_JHDJ01000131.1 Protein Homology CDS 30576 31484 . - 0 ID=cds-WP_001242684.1;Parent=gene-AD08_RS16965;Dbxref=Genbank:WP_001242684.1;Name=WP_001242684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415420.1;locus_tag=AD08_RS16965;product=LysR family transcriptional regulator;protein_id=WP_001242684.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 31584 32174 . + . ID=gene-AD08_RS16960;Name=AD08_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16960;old_locus_tag=AD08_1068 NZ_JHDJ01000131.1 Protein Homology CDS 31584 32174 . + 0 ID=cds-WP_001190363.1;Parent=gene-AD08_RS16960;Dbxref=Genbank:WP_001190363.1;Name=WP_001190363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415421.1;locus_tag=AD08_RS16960;product=NAD(P)H oxidoreductase;protein_id=WP_001190363.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 32256 32996 . - . ID=gene-AD08_RS16955;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=AD08_RS16955;old_locus_tag=AD08_1069 NZ_JHDJ01000131.1 Protein Homology CDS 32256 32996 . - 0 ID=cds-WP_000111043.1;Parent=gene-AD08_RS16955;Dbxref=Genbank:WP_000111043.1;Name=WP_000111043.1;gbkey=CDS;gene=pflA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309012.1;locus_tag=AD08_RS16955;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000111043.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 33188 35470 . - . ID=gene-AD08_RS16950;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=AD08_RS16950;old_locus_tag=AD08_1070 NZ_JHDJ01000131.1 Protein Homology CDS 33188 35470 . - 0 ID=cds-WP_001292822.1;Parent=gene-AD08_RS16950;Dbxref=Genbank:WP_001292822.1;Name=WP_001292822.1;gbkey=CDS;gene=pflB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=AD08_RS16950;product=formate C-acetyltransferase;protein_id=WP_001292822.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 35525 36382 . - . ID=gene-AD08_RS31065;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=AD08_RS31065;old_locus_tag=AD08_1071 NZ_JHDJ01000131.1 Protein Homology CDS 35525 36382 . - 0 ID=cds-WP_000642546.1;Parent=gene-AD08_RS31065;Dbxref=Genbank:WP_000642546.1;Name=WP_000642546.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309014.1;locus_tag=AD08_RS31065;product=formate transporter FocA;protein_id=WP_000642546.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 36788 38548 . - . ID=gene-AD08_RS16940;Name=AD08_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16940;old_locus_tag=AD08_1072 NZ_JHDJ01000131.1 Protein Homology CDS 36788 38548 . - 0 ID=cds-WP_001389994.1;Parent=gene-AD08_RS16940;Dbxref=Genbank:WP_001389994.1;Name=WP_001389994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415425.4;locus_tag=AD08_RS16940;product=30S ribosomal protein S12 methylthiotransferase accessory protein YcaO;protein_id=WP_001389994.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 38679 39371 . + . ID=gene-AD08_RS16935;Name=AD08_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16935;old_locus_tag=AD08_1073 NZ_JHDJ01000131.1 Protein Homology CDS 38679 39371 . + 0 ID=cds-WP_000642849.1;Parent=gene-AD08_RS16935;Dbxref=Genbank:WP_000642849.1;Name=WP_000642849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415426.1;locus_tag=AD08_RS16935;product=DUF421 domain-containing protein;protein_id=WP_000642849.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 39570 40658 . + . ID=gene-AD08_RS16930;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=AD08_RS16930;old_locus_tag=AD08_1074 NZ_JHDJ01000131.1 Protein Homology CDS 39570 40658 . + 0 ID=cds-WP_000057138.1;Parent=gene-AD08_RS16930;Dbxref=Genbank:WP_000057138.1;Name=WP_000057138.1;gbkey=CDS;gene=serC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057138.1;locus_tag=AD08_RS16930;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000057138.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 40729 42012 . + . ID=gene-AD08_RS16925;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=AD08_RS16925;old_locus_tag=AD08_1075 NZ_JHDJ01000131.1 Protein Homology CDS 40729 42012 . + 0 ID=cds-WP_000445231.1;Parent=gene-AD08_RS16925;Dbxref=Genbank:WP_000445231.1;Name=WP_000445231.1;gbkey=CDS;gene=aroA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309018.1;locus_tag=AD08_RS16925;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_000445231.1;transl_table=11 NZ_JHDJ01000131.1 RefSeq gene 42085 43431 . - . ID=gene-AD08_RS16920;Name=AD08_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16920;old_locus_tag=AD08_1076 NZ_JHDJ01000131.1 Protein Homology CDS 42085 43431 . - 0 ID=cds-WP_000483767.1-3;Parent=gene-AD08_RS16920;Dbxref=Genbank:WP_000483767.1;Name=WP_000483767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AD08_RS16920;product=IS4-like element IS4 family transposase;protein_id=WP_000483767.1;transl_table=11 ##sequence-region NZ_JHDJ01000132.1 1 128433 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000132.1 RefSeq region 1 128433 . + . ID=NZ_JHDJ01000132.1:1..128433;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000132.1 RefSeq gene 1 1335 . - . ID=gene-AD08_RS16915;Name=AD08_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16915;old_locus_tag=AD08_1077;partial=true;start_range=.,1 NZ_JHDJ01000132.1 Protein Homology CDS 1 1335 . - 0 ID=cds-WP_032171013.1-4;Parent=gene-AD08_RS16915;Dbxref=Genbank:WP_032171013.1;Name=WP_032171013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AD08_RS16915;partial=true;product=IS4-like element IS4 family transposase;protein_id=WP_032171013.1;start_range=.,1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 1524 2288 . + . ID=gene-AD08_RS16910;Name=AD08_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16910;old_locus_tag=AD08_1078 NZ_JHDJ01000132.1 Protein Homology CDS 1524 2288 . + 0 ID=cds-WP_001295345.1;Parent=gene-AD08_RS16910;Dbxref=Genbank:WP_001295345.1;Name=WP_001295345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706828.2;locus_tag=AD08_RS16910;product=metallopeptidase YcaL;protein_id=WP_001295345.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 2461 3144 . + . ID=gene-AD08_RS16905;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=AD08_RS16905;old_locus_tag=AD08_1079 NZ_JHDJ01000132.1 Protein Homology CDS 2461 3144 . + 0 ID=cds-WP_000125016.1;Parent=gene-AD08_RS16905;Dbxref=Genbank:WP_000125016.1;Name=WP_000125016.1;gbkey=CDS;gene=cmk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=AD08_RS16905;product=(d)CMP kinase;protein_id=WP_000125016.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 3255 4928 . + . ID=gene-AD08_RS16900;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=AD08_RS16900;old_locus_tag=AD08_1080 NZ_JHDJ01000132.1 Protein Homology CDS 3255 4928 . + 0 ID=cds-WP_000140327.1;Parent=gene-AD08_RS16900;Dbxref=Genbank:WP_000140327.1;Name=WP_000140327.1;gbkey=CDS;gene=rpsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=AD08_RS16900;product=30S ribosomal protein S1;protein_id=WP_000140327.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 5088 5372 . + . ID=gene-AD08_RS16895;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=AD08_RS16895;old_locus_tag=AD08_1081 NZ_JHDJ01000132.1 Protein Homology CDS 5088 5372 . + 0 ID=cds-WP_000167336.1;Parent=gene-AD08_RS16895;Dbxref=Genbank:WP_000167336.1;Name=WP_000167336.1;gbkey=CDS;gene=ihfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309022.1;locus_tag=AD08_RS16895;product=integration host factor subunit beta;protein_id=WP_000167336.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 5580 7844 . + . ID=gene-AD08_RS16890;Name=AD08_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16890;old_locus_tag=AD08_1082 NZ_JHDJ01000132.1 Protein Homology CDS 5580 7844 . + 0 ID=cds-WP_032218386.1;Parent=gene-AD08_RS16890;Dbxref=Genbank:WP_032218386.1;Name=WP_032218386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415433.4;locus_tag=AD08_RS16890;product=ComEC family protein;protein_id=WP_032218386.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 7881 9629 . + . ID=gene-AD08_RS16885;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=AD08_RS16885;old_locus_tag=AD08_1083 NZ_JHDJ01000132.1 Protein Homology CDS 7881 9629 . + 0 ID=cds-WP_000551270.1;Parent=gene-AD08_RS16885;Dbxref=Genbank:WP_000551270.1;Name=WP_000551270.1;gbkey=CDS;gene=msbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309024.1;locus_tag=AD08_RS16885;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551270.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 9626 10612 . + . ID=gene-AD08_RS16880;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=AD08_RS16880;old_locus_tag=AD08_1084 NZ_JHDJ01000132.1 Protein Homology CDS 9626 10612 . + 0 ID=cds-WP_000570539.1;Parent=gene-AD08_RS16880;Dbxref=Genbank:WP_000570539.1;Name=WP_000570539.1;gbkey=CDS;gene=lpxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415435.1;locus_tag=AD08_RS16880;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000570539.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 10649 11881 . + . ID=gene-AD08_RS16875;Name=ycaQ;gbkey=Gene;gene=ycaQ;gene_biotype=protein_coding;locus_tag=AD08_RS16875;old_locus_tag=AD08_1085 NZ_JHDJ01000132.1 Protein Homology CDS 10649 11881 . + 0 ID=cds-WP_000056538.1;Parent=gene-AD08_RS16875;Dbxref=Genbank:WP_000056538.1;Name=WP_000056538.1;gbkey=CDS;gene=ycaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415436.1;locus_tag=AD08_RS16875;product=winged helix DNA-binding protein YcaQ;protein_id=WP_000056538.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 11933 12115 . + . ID=gene-AD08_RS16870;Name=AD08_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16870;old_locus_tag=AD08_1086 NZ_JHDJ01000132.1 Protein Homology CDS 11933 12115 . + 0 ID=cds-WP_000350058.1;Parent=gene-AD08_RS16870;Dbxref=Genbank:WP_000350058.1;Name=WP_000350058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309027.1;locus_tag=AD08_RS16870;product=protein YcaR;protein_id=WP_000350058.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 12112 12858 . + . ID=gene-AD08_RS16865;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=AD08_RS16865;old_locus_tag=AD08_1087 NZ_JHDJ01000132.1 Protein Homology CDS 12112 12858 . + 0 ID=cds-WP_000011603.1;Parent=gene-AD08_RS16865;Dbxref=Genbank:WP_000011603.1;Name=WP_000011603.1;gbkey=CDS;gene=kdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415438.1;locus_tag=AD08_RS16865;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011603.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 13012 13905 . + . ID=gene-AD08_RS16860;Name=AD08_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16860;old_locus_tag=AD08_1088 NZ_JHDJ01000132.1 Protein Homology CDS 13012 13905 . + 0 ID=cds-WP_000436922.1;Parent=gene-AD08_RS16860;Dbxref=Genbank:WP_000436922.1;Name=WP_000436922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309029.1;locus_tag=AD08_RS16860;product=YcbJ family phosphotransferase;protein_id=WP_000436922.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 13882 14661 . - . ID=gene-AD08_RS16855;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=AD08_RS16855;old_locus_tag=AD08_1089 NZ_JHDJ01000132.1 Protein Homology CDS 13882 14661 . - 0 ID=cds-WP_000899600.1;Parent=gene-AD08_RS16855;Dbxref=Genbank:WP_000899600.1;Name=WP_000899600.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309030.1;locus_tag=AD08_RS16855;product=envelope biogenesis factor ElyC;protein_id=WP_000899600.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 14797 15582 . + . ID=gene-AD08_RS16850;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=AD08_RS16850;old_locus_tag=AD08_1090 NZ_JHDJ01000132.1 Protein Homology CDS 14797 15582 . + 0 ID=cds-WP_001298300.1;Parent=gene-AD08_RS16850;Dbxref=Genbank:WP_001298300.1;Name=WP_001298300.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415441.1;locus_tag=AD08_RS16850;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001298300.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 15579 16901 . + . ID=gene-AD08_RS16845;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=AD08_RS16845;old_locus_tag=AD08_1091 NZ_JHDJ01000132.1 Protein Homology CDS 15579 16901 . + 0 ID=cds-WP_001288850.1;Parent=gene-AD08_RS16845;Dbxref=Genbank:WP_001288850.1;Name=WP_001288850.1;gbkey=CDS;gene=mukF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=AD08_RS16845;product=chromosome partition protein MukF;protein_id=WP_001288850.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 16882 17586 . + . ID=gene-AD08_RS16840;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=AD08_RS16840;old_locus_tag=AD08_1092 NZ_JHDJ01000132.1 Protein Homology CDS 16882 17586 . + 0 ID=cds-WP_001295347.1;Parent=gene-AD08_RS16840;Dbxref=Genbank:WP_001295347.1;Name=WP_001295347.1;gbkey=CDS;gene=mukE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415443.2;locus_tag=AD08_RS16840;product=chromosome partition protein MukE;protein_id=WP_001295347.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 17586 22046 . + . ID=gene-AD08_RS16835;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=AD08_RS16835;old_locus_tag=AD08_1093 NZ_JHDJ01000132.1 Protein Homology CDS 17586 22046 . + 0 ID=cds-WP_000572636.1;Parent=gene-AD08_RS16835;Dbxref=Genbank:WP_000572636.1;Name=WP_000572636.1;gbkey=CDS;gene=mukB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415444.1;locus_tag=AD08_RS16835;product=chromosome partition protein MukB;protein_id=WP_000572636.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 22307 24154 . + . ID=gene-AD08_RS16830;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=AD08_RS16830;old_locus_tag=AD08_1094 NZ_JHDJ01000132.1 Protein Homology CDS 22307 24154 . + 0 ID=cds-WP_032218393.1;Parent=gene-AD08_RS16830;Dbxref=Genbank:WP_032218393.1;Name=WP_032218393.1;gbkey=CDS;gene=ldtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415445.1;locus_tag=AD08_RS16830;product=L%2CD-transpeptidase;protein_id=WP_032218393.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 24335 24883 . + . ID=gene-AD08_RS16825;Name=AD08_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16825;old_locus_tag=AD08_1095 NZ_JHDJ01000132.1 Protein Homology CDS 24335 24883 . + 0 ID=cds-WP_001295932.1;Parent=gene-AD08_RS16825;Dbxref=Genbank:WP_001295932.1;Name=WP_001295932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309036.1;locus_tag=AD08_RS16825;product=YcbK family protein;protein_id=WP_001295932.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 24910 25557 . + . ID=gene-AD08_RS16820;Name=gloC;gbkey=Gene;gene=gloC;gene_biotype=protein_coding;locus_tag=AD08_RS16820;old_locus_tag=AD08_1096 NZ_JHDJ01000132.1 Protein Homology CDS 24910 25557 . + 0 ID=cds-WP_001109486.1;Parent=gene-AD08_RS16820;Dbxref=Genbank:WP_001109486.1;Name=WP_001109486.1;gbkey=CDS;gene=gloC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=AD08_RS16820;product=hydroxyacylglutathione hydrolase GloC;protein_id=WP_001109486.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 25779 26969 . - . ID=gene-AD08_RS16815;Name=AD08_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16815;old_locus_tag=AD08_1097 NZ_JHDJ01000132.1 Protein Homology CDS 25779 26969 . - 0 ID=cds-WP_001504136.1;Parent=gene-AD08_RS16815;Dbxref=Genbank:WP_001504136.1;Name=WP_001504136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=AD08_RS16815;product=aspartate transaminase;protein_id=WP_001504136.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 27154 28242 . - . ID=gene-AD08_RS16810;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=AD08_RS16810;old_locus_tag=AD08_1098 NZ_JHDJ01000132.1 Protein Homology CDS 27154 28242 . - 0 ID=cds-WP_000977920.1;Parent=gene-AD08_RS16810;Dbxref=Genbank:WP_000977920.1;Name=WP_000977920.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415449.1;locus_tag=AD08_RS16810;product=porin OmpF;protein_id=WP_000977920.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 28845 30245 . - . ID=gene-AD08_RS16805;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=AD08_RS16805;old_locus_tag=AD08_1100 NZ_JHDJ01000132.1 Protein Homology CDS 28845 30245 . - 0 ID=cds-WP_000117881.1;Parent=gene-AD08_RS16805;Dbxref=Genbank:WP_000117881.1;Name=WP_000117881.1;gbkey=CDS;gene=asnS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=AD08_RS16805;product=asparagine--tRNA ligase;protein_id=WP_000117881.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 30414 31616 . - . ID=gene-AD08_RS16800;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=AD08_RS16800;old_locus_tag=AD08_1101 NZ_JHDJ01000132.1 Protein Homology CDS 30414 31616 . - 0 ID=cds-WP_001307697.1;Parent=gene-AD08_RS16800;Dbxref=Genbank:WP_001307697.1;Name=WP_001307697.1;gbkey=CDS;gene=pncB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415451.1;locus_tag=AD08_RS16800;product=nicotinate phosphoribosyltransferase;protein_id=WP_001307697.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 31882 34494 . + . ID=gene-AD08_RS16795;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=AD08_RS16795;old_locus_tag=AD08_1102 NZ_JHDJ01000132.1 Protein Homology CDS 31882 34494 . + 0 ID=cds-WP_000193841.1;Parent=gene-AD08_RS16795;Dbxref=Genbank:WP_000193841.1;Name=WP_000193841.1;gbkey=CDS;gene=pepN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=AD08_RS16795;product=aminopeptidase N;protein_id=WP_000193841.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 34537 35304 . - . ID=gene-AD08_RS16790;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=AD08_RS16790;old_locus_tag=AD08_1103 NZ_JHDJ01000132.1 Protein Homology CDS 34537 35304 . - 0 ID=cds-WP_001090506.1;Parent=gene-AD08_RS16790;Dbxref=Genbank:WP_001090506.1;Name=WP_001090506.1;gbkey=CDS;gene=ssuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309043.1;locus_tag=AD08_RS16790;product=aliphatic sulfonates ABC transporter ATP-binding protein;protein_id=WP_001090506.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 35301 36092 . - . ID=gene-AD08_RS16785;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=AD08_RS16785;old_locus_tag=AD08_1104 NZ_JHDJ01000132.1 Protein Homology CDS 35301 36092 . - 0 ID=cds-WP_000235203.1;Parent=gene-AD08_RS16785;Dbxref=Genbank:WP_000235203.1;Name=WP_000235203.1;gbkey=CDS;gene=ssuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415454.4;locus_tag=AD08_RS16785;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_000235203.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 36103 37248 . - . ID=gene-AD08_RS16780;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=AD08_RS16780;old_locus_tag=AD08_1105 NZ_JHDJ01000132.1 Protein Homology CDS 36103 37248 . - 0 ID=cds-WP_000056006.1;Parent=gene-AD08_RS16780;Dbxref=Genbank:WP_000056006.1;Name=WP_000056006.1;gbkey=CDS;gene=ssuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415455.1;locus_tag=AD08_RS16780;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_000056006.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 37245 38204 . - . ID=gene-AD08_RS16775;Name=AD08_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16775;old_locus_tag=AD08_1106 NZ_JHDJ01000132.1 Protein Homology CDS 37245 38204 . - 0 ID=cds-WP_001244308.1;Parent=gene-AD08_RS16775;Dbxref=Genbank:WP_001244308.1;Name=WP_001244308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415456.4;locus_tag=AD08_RS16775;product=aliphatic sulfonate ABC transporter substrate-binding protein SsuA;protein_id=WP_001244308.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 38197 38772 . - . ID=gene-AD08_RS16770;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=AD08_RS16770;old_locus_tag=AD08_1107 NZ_JHDJ01000132.1 Protein Homology CDS 38197 38772 . - 0 ID=cds-WP_001263933.1;Parent=gene-AD08_RS16770;Dbxref=Genbank:WP_001263933.1;Name=WP_001263933.1;gbkey=CDS;gene=ssuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415457.1;locus_tag=AD08_RS16770;product=NADPH-dependent FMN reductase;protein_id=WP_001263933.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 39124 39663 . + . ID=gene-AD08_RS16765;Name=AD08_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16765;old_locus_tag=AD08_1108 NZ_JHDJ01000132.1 Protein Homology CDS 39124 39663 . + 0 ID=cds-WP_000750293.1;Parent=gene-AD08_RS16765;Dbxref=Genbank:WP_000750293.1;Name=WP_000750293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415458.2;locus_tag=AD08_RS16765;product=fimbrial protein;protein_id=WP_000750293.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 39746 40447 . + . ID=gene-AD08_RS16760;Name=AD08_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16760;old_locus_tag=AD08_1109 NZ_JHDJ01000132.1 Protein Homology CDS 39746 40447 . + 0 ID=cds-WP_001295349.1;Parent=gene-AD08_RS16760;Dbxref=Genbank:WP_001295349.1;Name=WP_001295349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415459.1;locus_tag=AD08_RS16760;product=molecular chaperone;protein_id=WP_001295349.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 40472 43072 . + . ID=gene-AD08_RS16755;Name=AD08_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16755;old_locus_tag=AD08_1110 NZ_JHDJ01000132.1 Protein Homology CDS 40472 43072 . + 0 ID=cds-WP_050436509.1;Parent=gene-AD08_RS16755;Dbxref=Genbank:WP_050436509.1;Name=WP_050436509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415460.1;locus_tag=AD08_RS16755;product=fimbrial biogenesis usher protein;protein_id=WP_050436509.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 43063 44133 . + . ID=gene-AD08_RS16750;Name=AD08_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16750;old_locus_tag=AD08_1111 NZ_JHDJ01000132.1 Protein Homology CDS 43063 44133 . + 0 ID=cds-WP_001165668.1;Parent=gene-AD08_RS16750;Dbxref=Genbank:WP_001165668.1;Name=WP_001165668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415461.1;locus_tag=AD08_RS16750;product=fimbrial protein;protein_id=WP_001165668.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 44145 44687 . + . ID=gene-AD08_RS16745;Name=AD08_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16745;old_locus_tag=AD08_1112 NZ_JHDJ01000132.1 Protein Homology CDS 44145 44687 . + 0 ID=cds-WP_000730614.1;Parent=gene-AD08_RS16745;Dbxref=Genbank:WP_000730614.1;Name=WP_000730614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415462.1;locus_tag=AD08_RS16745;product=fimbrial protein;protein_id=WP_000730614.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 44695 45210 . + . ID=gene-AD08_RS16740;Name=AD08_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16740;old_locus_tag=AD08_1113 NZ_JHDJ01000132.1 Protein Homology CDS 44695 45210 . + 0 ID=cds-WP_000919497.1;Parent=gene-AD08_RS16740;Dbxref=Genbank:WP_000919497.1;Name=WP_000919497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415463.2;locus_tag=AD08_RS16740;product=type 1 fimbrial protein;protein_id=WP_000919497.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 45176 45913 . + . ID=gene-AD08_RS16735;Name=AD08_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16735;old_locus_tag=AD08_1114 NZ_JHDJ01000132.1 Protein Homology CDS 45176 45913 . + 0 ID=cds-WP_001111465.1;Parent=gene-AD08_RS16735;Dbxref=Genbank:WP_001111465.1;Name=WP_001111465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706867.1;locus_tag=AD08_RS16735;product=fimbrial chaperone;protein_id=WP_001111465.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 46024 47034 . + . ID=gene-AD08_RS16730;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=AD08_RS16730;old_locus_tag=AD08_1115 NZ_JHDJ01000132.1 Protein Homology CDS 46024 47034 . + 0 ID=cds-WP_001295352.1;Parent=gene-AD08_RS16730;Dbxref=Genbank:WP_001295352.1;Name=WP_001295352.1;gbkey=CDS;gene=pyrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309056.1;locus_tag=AD08_RS16730;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_001295352.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 47208 47750 . + . ID=gene-AD08_RS16725;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=AD08_RS16725;old_locus_tag=AD08_1116 NZ_JHDJ01000132.1 Protein Homology CDS 47208 47750 . + 0 ID=cds-WP_001295353.1;Parent=gene-AD08_RS16725;Dbxref=Genbank:WP_001295353.1;Name=WP_001295353.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415466.4;locus_tag=AD08_RS16725;product=cell division protein ZapC;protein_id=WP_001295353.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 47747 48856 . - . ID=gene-AD08_RS16720;Name=ycbX;gbkey=Gene;gene=ycbX;gene_biotype=protein_coding;locus_tag=AD08_RS16720;old_locus_tag=AD08_1117 NZ_JHDJ01000132.1 Protein Homology CDS 47747 48856 . - 0 ID=cds-WP_000212426.1;Parent=gene-AD08_RS16720;Dbxref=Genbank:WP_000212426.1;Name=WP_000212426.1;gbkey=CDS;gene=ycbX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415467.1;locus_tag=AD08_RS16720;product=6-N-hydroxylaminopurine resistance protein YcbX;protein_id=WP_000212426.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 49100 51208 . + . ID=gene-AD08_RS16715;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=AD08_RS16715;old_locus_tag=AD08_1118 NZ_JHDJ01000132.1 Protein Homology CDS 49100 51208 . + 0 ID=cds-WP_001086539.1;Parent=gene-AD08_RS16715;Dbxref=Genbank:WP_001086539.1;Name=WP_001086539.1;gbkey=CDS;gene=rlmKL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415468.1;locus_tag=AD08_RS16715;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_001086539.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 51220 53127 . + . ID=gene-AD08_RS16710;Name=AD08_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16710;old_locus_tag=AD08_1119 NZ_JHDJ01000132.1 Protein Homology CDS 51220 53127 . + 0 ID=cds-WP_000053099.1;Parent=gene-AD08_RS16710;Dbxref=Genbank:WP_000053099.1;Name=WP_000053099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415469.1;locus_tag=AD08_RS16710;product=ABC transporter ATP-binding protein;protein_id=WP_000053099.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 53257 54510 . + . ID=gene-AD08_RS16705;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=AD08_RS16705;old_locus_tag=AD08_1120 NZ_JHDJ01000132.1 Protein Homology CDS 53257 54510 . + 0 ID=cds-WP_000333176.1;Parent=gene-AD08_RS16705;Dbxref=Genbank:WP_000333176.1;Name=WP_000333176.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415470.1;locus_tag=AD08_RS16705;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_000333176.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 54515 56155 . + . ID=gene-AD08_RS16700;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=AD08_RS16700;old_locus_tag=AD08_1121 NZ_JHDJ01000132.1 Protein Homology CDS 54515 56155 . + 0 ID=cds-WP_000445533.1;Parent=gene-AD08_RS16700;Dbxref=Genbank:WP_000445533.1;Name=WP_000445533.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415471.1;locus_tag=AD08_RS16700;product=intermembrane transport protein PqiB;protein_id=WP_000445533.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 56152 56715 . + . ID=gene-AD08_RS16695;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=AD08_RS16695;old_locus_tag=AD08_1122 NZ_JHDJ01000132.1 Protein Homology CDS 56152 56715 . + 0 ID=cds-WP_000759120.1;Parent=gene-AD08_RS16695;Dbxref=Genbank:WP_000759120.1;Name=WP_000759120.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706875.1;locus_tag=AD08_RS16695;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759120.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 56971 57138 . + . ID=gene-AD08_RS0125355;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=AD08_RS0125355 NZ_JHDJ01000132.1 Protein Homology CDS 56971 57138 . + 0 ID=cds-WP_000828648.1;Parent=gene-AD08_RS0125355;Dbxref=Genbank:WP_000828648.1;Name=WP_000828648.1;gbkey=CDS;gene=rmf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309064.1;locus_tag=AD08_RS0125355;product=ribosome modulation factor;protein_id=WP_000828648.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 57208 57726 . - . ID=gene-AD08_RS16690;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=AD08_RS16690;old_locus_tag=AD08_1123 NZ_JHDJ01000132.1 Protein Homology CDS 57208 57726 . - 0 ID=cds-WP_000227927.1;Parent=gene-AD08_RS16690;Dbxref=Genbank:WP_000227927.1;Name=WP_000227927.1;gbkey=CDS;gene=fabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=AD08_RS16690;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227927.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 57795 59555 . - . ID=gene-AD08_RS16685;Name=AD08_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16685;old_locus_tag=AD08_1124 NZ_JHDJ01000132.1 Protein Homology CDS 57795 59555 . - 0 ID=cds-WP_000156518.1;Parent=gene-AD08_RS16685;Dbxref=Genbank:WP_000156518.1;Name=WP_000156518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415475.1;locus_tag=AD08_RS16685;product=Lon protease family protein;protein_id=WP_000156518.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 59741 60193 . + . ID=gene-AD08_RS16680;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=AD08_RS16680;old_locus_tag=AD08_1125 NZ_JHDJ01000132.1 Protein Homology CDS 59741 60193 . + 0 ID=cds-WP_000877161.1;Parent=gene-AD08_RS16680;Dbxref=Genbank:WP_000877161.1;Name=WP_000877161.1;gbkey=CDS;gene=matP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309067.1;locus_tag=AD08_RS16680;product=macrodomain Ter protein MatP;protein_id=WP_000877161.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 60269 61309 . - . ID=gene-AD08_RS16675;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=AD08_RS16675;old_locus_tag=AD08_1126 NZ_JHDJ01000132.1 Protein Homology CDS 60269 61309 . - 0 ID=cds-WP_000750416.1;Parent=gene-AD08_RS16675;Dbxref=Genbank:WP_000750416.1;Name=WP_000750416.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309068.1;locus_tag=AD08_RS16675;product=porin OmpA;protein_id=WP_000750416.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 61666 62175 . - . ID=gene-AD08_RS16670;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=AD08_RS16670;old_locus_tag=AD08_1127 NZ_JHDJ01000132.1 Protein Homology CDS 61666 62175 . - 0 ID=cds-WP_000288710.1;Parent=gene-AD08_RS16670;Dbxref=Genbank:WP_000288710.1;Name=WP_000288710.1;gbkey=CDS;gene=sulA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309069.1;locus_tag=AD08_RS16670;product=cell division inhibitor SulA;protein_id=WP_000288710.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 62394 63023 . + . ID=gene-AD08_RS16665;Name=sxy;gbkey=Gene;gene=sxy;gene_biotype=protein_coding;locus_tag=AD08_RS16665;old_locus_tag=AD08_1128 NZ_JHDJ01000132.1 Protein Homology CDS 62394 63023 . + 0 ID=cds-WP_000839153.1;Parent=gene-AD08_RS16665;Dbxref=Genbank:WP_000839153.1;Name=WP_000839153.1;gbkey=CDS;gene=sxy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415479.1;locus_tag=AD08_RS16665;product=CRP-S regulon transcriptional coactivator Sxy;protein_id=WP_000839153.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 62986 65148 . - . ID=gene-AD08_RS16660;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=AD08_RS16660;old_locus_tag=AD08_1129 NZ_JHDJ01000132.1 Protein Homology CDS 62986 65148 . - 0 ID=cds-WP_000875061.1;Parent=gene-AD08_RS16660;Dbxref=Genbank:WP_000875061.1;Name=WP_000875061.1;gbkey=CDS;gene=yccS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309071.3;locus_tag=AD08_RS16660;product=TIGR01666 family membrane protein;protein_id=WP_000875061.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 65158 65604 . - . ID=gene-AD08_RS16655;Name=AD08_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16655;old_locus_tag=AD08_1130 NZ_JHDJ01000132.1 Protein Homology CDS 65158 65604 . - 0 ID=cds-WP_001261235.1;Parent=gene-AD08_RS16655;Dbxref=Genbank:WP_001261235.1;Name=WP_001261235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415481.1;locus_tag=AD08_RS16655;product=YccF domain-containing protein;protein_id=WP_001261235.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 65727 67781 . + . ID=gene-AD08_RS16650;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=AD08_RS16650;old_locus_tag=AD08_1131 NZ_JHDJ01000132.1 Protein Homology CDS 65727 67781 . + 0 ID=cds-WP_001295354.1;Parent=gene-AD08_RS16650;Dbxref=Genbank:WP_001295354.1;Name=WP_001295354.1;gbkey=CDS;gene=helD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415482.1;locus_tag=AD08_RS16650;product=DNA helicase IV;protein_id=WP_001295354.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 67813 68271 . - . ID=gene-AD08_RS16645;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=AD08_RS16645;old_locus_tag=AD08_1132 NZ_JHDJ01000132.1 Protein Homology CDS 67813 68271 . - 0 ID=cds-WP_000424181.1;Parent=gene-AD08_RS16645;Dbxref=Genbank:WP_000424181.1;Name=WP_000424181.1;gbkey=CDS;gene=mgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415483.2;locus_tag=AD08_RS16645;product=methylglyoxal synthase;protein_id=WP_000424181.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 68367 69029 . - . ID=gene-AD08_RS16640;Name=AD08_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16640;old_locus_tag=AD08_1133 NZ_JHDJ01000132.1 Protein Homology CDS 68367 69029 . - 0 ID=cds-WP_000847791.1;Parent=gene-AD08_RS16640;Dbxref=Genbank:WP_000847791.1;Name=WP_000847791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309075.1;locus_tag=AD08_RS16640;product=DUF2057 family protein;protein_id=WP_000847791.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 69202 69615 . + . ID=gene-AD08_RS16630;Name=AD08_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16630;old_locus_tag=AD08_1135 NZ_JHDJ01000132.1 Protein Homology CDS 69202 69615 . + 0 ID=cds-WP_001301418.1;Parent=gene-AD08_RS16630;Dbxref=Genbank:WP_001301418.1;Name=WP_001301418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415485.4;locus_tag=AD08_RS16630;product=CoA-binding protein;protein_id=WP_001301418.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 69660 69977 . - . ID=gene-AD08_RS16625;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=AD08_RS16625;old_locus_tag=AD08_1136 NZ_JHDJ01000132.1 Protein Homology CDS 69660 69977 . - 0 ID=cds-WP_001295356.1;Parent=gene-AD08_RS16625;Dbxref=Genbank:WP_001295356.1;Name=WP_001295356.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=AD08_RS16625;product=heat shock protein HspQ;protein_id=WP_001295356.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 70035 71225 . - . ID=gene-AD08_RS16620;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=AD08_RS16620;old_locus_tag=AD08_1137 NZ_JHDJ01000132.1 Protein Homology CDS 70035 71225 . - 0 ID=cds-WP_032218407.1;Parent=gene-AD08_RS16620;Dbxref=Genbank:WP_032218407.1;Name=WP_032218407.1;gbkey=CDS;gene=rlmI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415487.4;locus_tag=AD08_RS16620;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_032218407.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 71320 71598 . + . ID=gene-AD08_RS16615;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=AD08_RS16615;old_locus_tag=AD08_1138 NZ_JHDJ01000132.1 Protein Homology CDS 71320 71598 . + 0 ID=cds-WP_000048252.1;Parent=gene-AD08_RS16615;Dbxref=Genbank:WP_000048252.1;Name=WP_000048252.1;gbkey=CDS;gene=yccX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309079.1;locus_tag=AD08_RS16615;product=acylphosphatase;protein_id=WP_000048252.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 71595 71924 . - . ID=gene-AD08_RS16610;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=AD08_RS16610;old_locus_tag=AD08_1139 NZ_JHDJ01000132.1 Protein Homology CDS 71595 71924 . - 0 ID=cds-WP_000904442.1;Parent=gene-AD08_RS16610;Dbxref=Genbank:WP_000904442.1;Name=WP_000904442.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309080.2;locus_tag=AD08_RS16610;product=sulfurtransferase TusE;protein_id=WP_000904442.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 72015 72674 . - . ID=gene-AD08_RS16605;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=AD08_RS16605;old_locus_tag=AD08_1140 NZ_JHDJ01000132.1 Protein Homology CDS 72015 72674 . - 0 ID=cds-WP_000375136.1;Parent=gene-AD08_RS16605;Dbxref=Genbank:WP_000375136.1;Name=WP_000375136.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=AD08_RS16605;product=FtsH protease modulator YccA;protein_id=WP_000375136.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 72881 72968 . - . ID=gene-AD08_RS16600;Name=AD08_RS16600;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS16600;old_locus_tag=AD08_1141 NZ_JHDJ01000132.1 tRNAscan-SE tRNA 72881 72968 . - . ID=rna-AD08_RS16600;Parent=gene-AD08_RS16600;anticodon=(pos:complement(72932..72934));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS16600;product=tRNA-Ser NZ_JHDJ01000132.1 tRNAscan-SE exon 72881 72968 . - . ID=exon-AD08_RS16600-1;Parent=rna-AD08_RS16600;anticodon=(pos:complement(72932..72934));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS16600;product=tRNA-Ser NZ_JHDJ01000132.1 RefSeq gene 73395 74513 . + . ID=gene-AD08_RS16595;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=AD08_RS16595;old_locus_tag=AD08_1142 NZ_JHDJ01000132.1 Protein Homology CDS 73395 74513 . + 0 ID=cds-WP_001058323.1;Parent=gene-AD08_RS16595;Dbxref=Genbank:WP_001058323.1;Name=WP_001058323.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415491.1;locus_tag=AD08_RS16595;product=hydrogenase 1 small subunit;protein_id=WP_001058323.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 74510 76303 . + . ID=gene-AD08_RS16590;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=AD08_RS16590;old_locus_tag=AD08_1143 NZ_JHDJ01000132.1 Protein Homology CDS 74510 76303 . + 0 ID=cds-WP_032218412.1;Parent=gene-AD08_RS16590;Dbxref=Genbank:WP_032218412.1;Name=WP_032218412.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415492.1;locus_tag=AD08_RS16590;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_032218412.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 76322 77029 . + . ID=gene-AD08_RS16585;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=AD08_RS16585;old_locus_tag=AD08_1144 NZ_JHDJ01000132.1 Protein Homology CDS 76322 77029 . + 0 ID=cds-WP_032218414.1;Parent=gene-AD08_RS16585;Dbxref=Genbank:WP_032218414.1;Name=WP_032218414.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309157.1;locus_tag=AD08_RS16585;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_032218414.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 77026 77613 . + . ID=gene-AD08_RS16580;Name=AD08_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16580;old_locus_tag=AD08_1145 NZ_JHDJ01000132.1 Protein Homology CDS 77026 77613 . + 0 ID=cds-WP_000003671.1;Parent=gene-AD08_RS16580;Dbxref=Genbank:WP_000003671.1;Name=WP_000003671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415494.1;locus_tag=AD08_RS16580;product=hydrogenase 1 maturation protease;protein_id=WP_000003671.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 77610 78008 . + . ID=gene-AD08_RS16575;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=AD08_RS16575;old_locus_tag=AD08_1146 NZ_JHDJ01000132.1 Protein Homology CDS 77610 78008 . + 0 ID=cds-WP_000063978.1;Parent=gene-AD08_RS16575;Dbxref=Genbank:WP_000063978.1;Name=WP_000063978.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415495.1;locus_tag=AD08_RS16575;product=hydrogenase-1 operon protein HyaE;protein_id=WP_000063978.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 78005 78862 . + . ID=gene-AD08_RS16570;Name=AD08_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16570;old_locus_tag=AD08_1147 NZ_JHDJ01000132.1 Protein Homology CDS 78005 78862 . + 0 ID=cds-WP_000004899.1;Parent=gene-AD08_RS16570;Dbxref=Genbank:WP_000004899.1;Name=WP_000004899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415496.1;locus_tag=AD08_RS16570;product=hydrogenase expression/formation protein;protein_id=WP_000004899.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 78996 80540 . + . ID=gene-AD08_RS16565;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=AD08_RS16565;old_locus_tag=AD08_1148 NZ_JHDJ01000132.1 Protein Homology CDS 78996 80540 . + 0 ID=cds-WP_000263577.1;Parent=gene-AD08_RS16565;Dbxref=Genbank:WP_000263577.1;Name=WP_000263577.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415497.1;locus_tag=AD08_RS16565;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263577.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 80552 81688 . + . ID=gene-AD08_RS16560;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=AD08_RS16560;old_locus_tag=AD08_1149 NZ_JHDJ01000132.1 Protein Homology CDS 80552 81688 . + 0 ID=cds-WP_000460793.1;Parent=gene-AD08_RS16560;Dbxref=Genbank:WP_000460793.1;Name=WP_000460793.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415498.1;locus_tag=AD08_RS16560;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000460793.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 81701 81793 . + . ID=gene-AD08_RS0125365;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=AD08_RS0125365 NZ_JHDJ01000132.1 Protein Homology CDS 81701 81793 . + 0 ID=cds-WP_000270305.1;Parent=gene-AD08_RS0125365;Dbxref=Genbank:WP_000270305.1;Name=WP_000270305.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165313.1;locus_tag=AD08_RS0125365;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270305.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 81873 83171 . + . ID=gene-AD08_RS16555;Name=AD08_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16555;old_locus_tag=AD08_1150 NZ_JHDJ01000132.1 Protein Homology CDS 81873 83171 . + 0 ID=cds-WP_001300464.1;Parent=gene-AD08_RS16555;Dbxref=Genbank:WP_001300464.1;Name=WP_001300464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415500.1;locus_tag=AD08_RS16555;product=bifunctional acid phosphatase/4-phytase;protein_id=WP_001300464.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 83286 85466 . - . ID=gene-AD08_RS16550;Name=etk;gbkey=Gene;gene=etk;gene_biotype=protein_coding;locus_tag=AD08_RS16550;old_locus_tag=AD08_1151 NZ_JHDJ01000132.1 Protein Homology CDS 83286 85466 . - 0 ID=cds-WP_000208650.1;Parent=gene-AD08_RS16550;Dbxref=Genbank:WP_000208650.1;Name=WP_000208650.1;gbkey=CDS;gene=etk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415501.1;locus_tag=AD08_RS16550;product=tyrosine-protein kinase;protein_id=WP_000208650.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 85486 85932 . - . ID=gene-AD08_RS16545;Name=etp;gbkey=Gene;gene=etp;gene_biotype=protein_coding;gene_synonym=yccY;locus_tag=AD08_RS16545;old_locus_tag=AD08_1152 NZ_JHDJ01000132.1 Protein Homology CDS 85486 85932 . - 0 ID=cds-WP_000057871.1;Parent=gene-AD08_RS16545;Dbxref=Genbank:WP_000057871.1;Name=WP_000057871.1;gbkey=CDS;gene=etp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309165.2;locus_tag=AD08_RS16545;product=protein-tyrosine-phosphatase Etp;protein_id=WP_000057871.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 85920 87059 . - . ID=gene-AD08_RS16540;Name=AD08_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16540;old_locus_tag=AD08_1153 NZ_JHDJ01000132.1 Protein Homology CDS 85920 87059 . - 0 ID=cds-WP_001295357.1;Parent=gene-AD08_RS16540;Dbxref=Genbank:WP_001295357.1;Name=WP_001295357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309166.1;locus_tag=AD08_RS16540;product=polysaccharide export protein;protein_id=WP_001295357.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 87105 89201 . - . ID=gene-AD08_RS16535;Name=AD08_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16535;old_locus_tag=AD08_1154 NZ_JHDJ01000132.1 Protein Homology CDS 87105 89201 . - 0 ID=cds-WP_000742328.1;Parent=gene-AD08_RS16535;Dbxref=Genbank:WP_000742328.1;Name=WP_000742328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415504.1;locus_tag=AD08_RS16535;product=YjbH domain-containing protein;protein_id=WP_000742328.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 89201 89947 . - . ID=gene-AD08_RS16530;Name=AD08_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16530;old_locus_tag=AD08_1155 NZ_JHDJ01000132.1 Protein Homology CDS 89201 89947 . - 0 ID=cds-WP_001038079.1;Parent=gene-AD08_RS16530;Dbxref=Genbank:WP_001038079.1;Name=WP_001038079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415505.1;locus_tag=AD08_RS16530;product=capsule biosynthesis GfcC family protein;protein_id=WP_001038079.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 89944 90588 . - . ID=gene-AD08_RS16525;Name=gfcB;gbkey=Gene;gene=gfcB;gene_biotype=protein_coding;locus_tag=AD08_RS16525;old_locus_tag=AD08_1156 NZ_JHDJ01000132.1 Protein Homology CDS 89944 90588 . - 0 ID=cds-WP_001247610.1;Parent=gene-AD08_RS16525;Dbxref=Genbank:WP_001247610.1;Name=WP_001247610.1;gbkey=CDS;gene=gfcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415506.1;locus_tag=AD08_RS16525;product=lipoprotein GfcB;protein_id=WP_001247610.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 90695 91000 . - . ID=gene-AD08_RS16520;Name=AD08_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16520;old_locus_tag=AD08_1157 NZ_JHDJ01000132.1 Protein Homology CDS 90695 91000 . - 0 ID=cds-WP_001295358.1;Parent=gene-AD08_RS16520;Dbxref=Genbank:WP_001295358.1;Name=WP_001295358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415507.2;locus_tag=AD08_RS16520;product=threonine-rich inner membrane protein GfcA;protein_id=WP_001295358.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 91442 91654 . - . ID=gene-AD08_RS16515;Name=cspH;gbkey=Gene;gene=cspH;gene_biotype=protein_coding;locus_tag=AD08_RS16515;old_locus_tag=AD08_1158 NZ_JHDJ01000132.1 Protein Homology CDS 91442 91654 . - 0 ID=cds-WP_000087763.1;Parent=gene-AD08_RS16515;Dbxref=Genbank:WP_000087763.1;Name=WP_000087763.1;gbkey=CDS;gene=cspH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415509.1;locus_tag=AD08_RS16515;product=cold shock-like protein CspH;protein_id=WP_000087763.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 91940 92152 . + . ID=gene-AD08_RS16510;Name=cspG;gbkey=Gene;gene=cspG;gene_biotype=protein_coding;locus_tag=AD08_RS16510;old_locus_tag=AD08_1159 NZ_JHDJ01000132.1 Protein Homology CDS 91940 92152 . + 0 ID=cds-WP_000066490.1;Parent=gene-AD08_RS16510;Dbxref=Genbank:WP_000066490.1;Name=WP_000066490.1;gbkey=CDS;gene=cspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309172.1;locus_tag=AD08_RS16510;product=cold shock protein CspG;protein_id=WP_000066490.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 92163 92351 . + . ID=gene-AD08_RS28495;Name=AD08_RS28495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS28495 NZ_JHDJ01000132.1 Protein Homology CDS 92163 92351 . + 0 ID=cds-WP_071524879.1;Parent=gene-AD08_RS28495;Dbxref=Genbank:WP_071524879.1;Name=WP_071524879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=AD08_RS28495;product=cold-shock protein;protein_id=WP_071524879.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 92326 92556 . + . ID=gene-AD08_RS0125370;Name=ymcE;gbkey=Gene;gene=ymcE;gene_biotype=protein_coding;locus_tag=AD08_RS0125370 NZ_JHDJ01000132.1 Protein Homology CDS 92326 92556 . + 0 ID=cds-WP_001309400.1;Parent=gene-AD08_RS0125370;Dbxref=Genbank:WP_001309400.1;Name=WP_001309400.1;gbkey=CDS;gene=ymcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415511.1;locus_tag=AD08_RS0125370;product=protein YmcE;protein_id=WP_001309400.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 92546 92719 . + . ID=gene-AD08_RS16505;Name=AD08_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16505;old_locus_tag=AD08_1161 NZ_JHDJ01000132.1 Protein Homology CDS 92546 92719 . + 0 ID=cds-WP_001019197.1;Parent=gene-AD08_RS16505;Dbxref=Genbank:WP_001019197.1;Name=WP_001019197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588446.1;locus_tag=AD08_RS16505;product=addiction module toxin%2C GnsA/GnsB family;protein_id=WP_001019197.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 92768 93841 . - . ID=gene-AD08_RS16500;Name=AD08_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16500;old_locus_tag=AD08_1162 NZ_JHDJ01000132.1 Protein Homology CDS 92768 93841 . - 0 ID=cds-WP_000829662.1;Parent=gene-AD08_RS16500;Dbxref=Genbank:WP_000829662.1;Name=WP_000829662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415512.1;locus_tag=AD08_RS16500;product=4Fe-4S binding protein;protein_id=WP_000829662.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 93913 96657 . - . ID=gene-AD08_RS16495;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=AD08_RS16495;old_locus_tag=AD08_1163 NZ_JHDJ01000132.1 Protein Homology CDS 93913 96657 . - 0 ID=cds-WP_001300633.1;Parent=gene-AD08_RS16495;Dbxref=Genbank:WP_001300633.1;Name=WP_001300633.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415513.2;locus_tag=AD08_RS16495;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_001300633.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 96740 97768 . + . ID=gene-AD08_RS16490;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=AD08_RS16490;old_locus_tag=AD08_1164 NZ_JHDJ01000132.1 Protein Homology CDS 96740 97768 . + 0 ID=cds-WP_001264933.1;Parent=gene-AD08_RS16490;Dbxref=Genbank:WP_001264933.1;Name=WP_001264933.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415514.1;locus_tag=AD08_RS16490;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_001264933.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 97741 98433 . - . ID=gene-AD08_RS16485;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=AD08_RS16485;old_locus_tag=AD08_1165 NZ_JHDJ01000132.1 Protein Homology CDS 97741 98433 . - 0 ID=cds-WP_001120125.1;Parent=gene-AD08_RS16485;Dbxref=Genbank:WP_001120125.1;Name=WP_001120125.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415515.1;locus_tag=AD08_RS16485;product=two-component system response regulator TorR;protein_id=WP_001120125.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 98563 99735 . + . ID=gene-AD08_RS16480;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=AD08_RS16480;old_locus_tag=AD08_1166 NZ_JHDJ01000132.1 Protein Homology CDS 98563 99735 . + 0 ID=cds-WP_001230242.1;Parent=gene-AD08_RS16480;Dbxref=Genbank:WP_001230242.1;Name=WP_001230242.1;gbkey=CDS;gene=torC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415516.1;locus_tag=AD08_RS16480;product=pentaheme c-type cytochrome TorC;protein_id=WP_001230242.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 99735 102281 . + . ID=gene-AD08_RS16475;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=AD08_RS16475;old_locus_tag=AD08_1167 NZ_JHDJ01000132.1 Protein Homology CDS 99735 102281 . + 0 ID=cds-WP_001062091.1;Parent=gene-AD08_RS16475;Dbxref=Genbank:WP_001062091.1;Name=WP_001062091.1;gbkey=CDS;gene=torA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415517.1;locus_tag=AD08_RS16475;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_001062091.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 102278 102877 . + . ID=gene-AD08_RS16470;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=AD08_RS16470;old_locus_tag=AD08_1168 NZ_JHDJ01000132.1 Protein Homology CDS 102278 102877 . + 0 ID=cds-WP_000209894.1;Parent=gene-AD08_RS16470;Dbxref=Genbank:WP_000209894.1;Name=WP_000209894.1;gbkey=CDS;gene=torD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415518.1;locus_tag=AD08_RS16470;product=molecular chaperone TorD;protein_id=WP_000209894.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 103029 103334 . - . ID=gene-AD08_RS16465;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=AD08_RS16465;old_locus_tag=AD08_1169 NZ_JHDJ01000132.1 Protein Homology CDS 103029 103334 . - 0 ID=cds-WP_000024560.1;Parent=gene-AD08_RS16465;Dbxref=Genbank:WP_000024560.1;Name=WP_000024560.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309181.1;locus_tag=AD08_RS16465;product=chaperone modulator CbpM;protein_id=WP_000024560.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 103334 104254 . - . ID=gene-AD08_RS16460;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=AD08_RS16460;old_locus_tag=AD08_1170 NZ_JHDJ01000132.1 Protein Homology CDS 103334 104254 . - 0 ID=cds-WP_000420621.1;Parent=gene-AD08_RS16460;Dbxref=Genbank:WP_000420621.1;Name=WP_000420621.1;gbkey=CDS;gene=cbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415520.1;locus_tag=AD08_RS16460;product=curved DNA-binding protein;protein_id=WP_000420621.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 104515 105771 . + . ID=gene-AD08_RS16455;Name=AD08_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16455;old_locus_tag=AD08_1171 NZ_JHDJ01000132.1 Protein Homology CDS 104515 105771 . + 0 ID=cds-WP_000535367.1;Parent=gene-AD08_RS16455;Dbxref=Genbank:WP_000535367.1;Name=WP_000535367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415521.1;locus_tag=AD08_RS16455;product=YccE family protein;protein_id=WP_000535367.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 106064 107305 . + . ID=gene-AD08_RS16450;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=AD08_RS16450;old_locus_tag=AD08_1172 NZ_JHDJ01000132.1 Protein Homology CDS 106064 107305 . + 0 ID=cds-WP_001044279.1;Parent=gene-AD08_RS16450;Dbxref=Genbank:WP_001044279.1;Name=WP_001044279.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415522.1;locus_tag=AD08_RS16450;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_001044279.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 107343 107570 . - . ID=gene-AD08_RS16445;Name=AD08_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16445;old_locus_tag=AD08_1173 NZ_JHDJ01000132.1 Protein Homology CDS 107343 107570 . - 0 ID=cds-WP_001143120.1;Parent=gene-AD08_RS16445;Dbxref=Genbank:WP_001143120.1;Name=WP_001143120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=AD08_RS16445;product=hypothetical protein;protein_id=WP_001143120.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 107591 108187 . - . ID=gene-AD08_RS16440;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=AD08_RS16440;old_locus_tag=AD08_1174 NZ_JHDJ01000132.1 Protein Homology CDS 107591 108187 . - 0 ID=cds-WP_001151437.1;Parent=gene-AD08_RS16440;Dbxref=Genbank:WP_001151437.1;Name=WP_001151437.1;gbkey=CDS;gene=wrbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415524.1;locus_tag=AD08_RS16440;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001151437.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 108560 108733 . + . ID=gene-AD08_RS0125380;Name=AD08_RS0125380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125380 NZ_JHDJ01000132.1 Protein Homology CDS 108560 108733 . + 0 ID=cds-WP_001273658.1;Parent=gene-AD08_RS0125380;Dbxref=Genbank:WP_001273658.1;Name=WP_001273658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415525.2;locus_tag=AD08_RS0125380;product=general stress protein;protein_id=WP_001273658.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 108990 110318 . - . ID=gene-AD08_RS16435;Name=rutG;gbkey=Gene;gene=rutG;gene_biotype=protein_coding;locus_tag=AD08_RS16435;old_locus_tag=AD08_1176 NZ_JHDJ01000132.1 Protein Homology CDS 108990 110318 . - 0 ID=cds-WP_001326838.1;Parent=gene-AD08_RS16435;Dbxref=Genbank:WP_001326838.1;Name=WP_001326838.1;gbkey=CDS;gene=rutG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415526.4;locus_tag=AD08_RS16435;product=pyrimidine utilization transport protein G;protein_id=WP_001326838.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 110339 110833 . - . ID=gene-AD08_RS16430;Name=rutF;gbkey=Gene;gene=rutF;gene_biotype=protein_coding;locus_tag=AD08_RS16430;old_locus_tag=AD08_1177 NZ_JHDJ01000132.1 Protein Homology CDS 110339 110833 . - 0 ID=cds-WP_001028083.1;Parent=gene-AD08_RS16430;Dbxref=Genbank:WP_001028083.1;Name=WP_001028083.1;gbkey=CDS;gene=rutF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415527.4;locus_tag=AD08_RS16430;product=pyrimidine utilization flavin reductase protein F;protein_id=WP_001028083.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 110844 111434 . - . ID=gene-AD08_RS16425;Name=AD08_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16425;old_locus_tag=AD08_1178 NZ_JHDJ01000132.1 Protein Homology CDS 110844 111434 . - 0 ID=cds-WP_001001176.1;Parent=gene-AD08_RS16425;Dbxref=Genbank:WP_001001176.1;Name=WP_001001176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415528.1;locus_tag=AD08_RS16425;product=malonic semialdehyde reductase;protein_id=WP_001001176.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 111444 112244 . - . ID=gene-AD08_RS16420;Name=rutD;gbkey=Gene;gene=rutD;gene_biotype=protein_coding;locus_tag=AD08_RS16420;old_locus_tag=AD08_1179 NZ_JHDJ01000132.1 Protein Homology CDS 111444 112244 . - 0 ID=cds-WP_000777653.1;Parent=gene-AD08_RS16420;Dbxref=Genbank:WP_000777653.1;Name=WP_000777653.1;gbkey=CDS;gene=rutD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415529.1;locus_tag=AD08_RS16420;product=pyrimidine utilization protein D;protein_id=WP_000777653.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 112252 112638 . - . ID=gene-AD08_RS16415;Name=rutC;gbkey=Gene;gene=rutC;gene_biotype=protein_coding;locus_tag=AD08_RS16415;old_locus_tag=AD08_1180 NZ_JHDJ01000132.1 Protein Homology CDS 112252 112638 . - 0 ID=cds-WP_001126780.1;Parent=gene-AD08_RS16415;Dbxref=Genbank:WP_001126780.1;Name=WP_001126780.1;gbkey=CDS;gene=rutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415530.1;locus_tag=AD08_RS16415;product=pyrimidine utilization protein C;protein_id=WP_001126780.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 112650 113342 . - . ID=gene-AD08_RS16410;Name=rutB;gbkey=Gene;gene=rutB;gene_biotype=protein_coding;locus_tag=AD08_RS16410;old_locus_tag=AD08_1181 NZ_JHDJ01000132.1 Protein Homology CDS 112650 113342 . - 0 ID=cds-WP_001393558.1;Parent=gene-AD08_RS16410;Dbxref=Genbank:WP_001393558.1;Name=WP_001393558.1;gbkey=CDS;gene=rutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415531.2;locus_tag=AD08_RS16410;product=peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB;protein_id=WP_001393558.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq pseudogene 113342 114434 . - . ID=gene-AD08_RS0125385;Name=rutA;gbkey=Gene;gene=rutA;gene_biotype=pseudogene;locus_tag=AD08_RS0125385;pseudo=true NZ_JHDJ01000132.1 Protein Homology CDS 113342 114434 . - 0 ID=cds-AD08_RS0125385;Parent=gene-AD08_RS0125385;Note=frameshifted;gbkey=CDS;gene=rutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309285.4;locus_tag=AD08_RS0125385;product=pyrimidine utilization protein A;pseudo=true;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 114722 115360 . + . ID=gene-AD08_RS16405;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=AD08_RS16405;old_locus_tag=AD08_1184 NZ_JHDJ01000132.1 Protein Homology CDS 114722 115360 . + 0 ID=cds-WP_000191701.1;Parent=gene-AD08_RS16405;Dbxref=Genbank:WP_000191701.1;Name=WP_000191701.1;gbkey=CDS;gene=rutR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415533.1;locus_tag=AD08_RS16405;product=HTH-type transcriptional regulator RutR;protein_id=WP_000191701.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 115400 119362 . - . ID=gene-AD08_RS16400;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=AD08_RS16400;old_locus_tag=AD08_1185 NZ_JHDJ01000132.1 Protein Homology CDS 115400 119362 . - 0 ID=cds-WP_032218426.1;Parent=gene-AD08_RS16400;Dbxref=Genbank:WP_032218426.1;Name=WP_032218426.1;gbkey=CDS;gene=putA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001462364.1;locus_tag=AD08_RS16400;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_032218426.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 119417 119626 . + . ID=gene-AD08_RS0125390;Name=AD08_RS0125390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125390 NZ_JHDJ01000132.1 GeneMarkS-2+ CDS 119417 119626 . + 0 ID=cds-WP_000979516.1;Parent=gene-AD08_RS0125390;Dbxref=Genbank:WP_000979516.1;Name=WP_000979516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS0125390;product=hypothetical protein;protein_id=WP_000979516.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 119785 121293 . + . ID=gene-AD08_RS16395;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=AD08_RS16395;old_locus_tag=AD08_1188 NZ_JHDJ01000132.1 Protein Homology CDS 119785 121293 . + 0 ID=cds-WP_032218427.1;Parent=gene-AD08_RS16395;Dbxref=Genbank:WP_032218427.1;Name=WP_032218427.1;gbkey=CDS;gene=putP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415535.1;locus_tag=AD08_RS16395;product=sodium/proline symporter PutP;protein_id=WP_032218427.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 121836 122666 . + . ID=gene-AD08_RS16390;Name=AD08_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16390;old_locus_tag=AD08_1189 NZ_JHDJ01000132.1 Protein Homology CDS 121836 122666 . + 0 ID=cds-WP_000497942.1;Parent=gene-AD08_RS16390;Dbxref=Genbank:WP_000497942.1;Name=WP_000497942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309290.1;locus_tag=AD08_RS16390;product=FTR1 family protein;protein_id=WP_000497942.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 122724 123851 . + . ID=gene-AD08_RS16385;Name=AD08_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16385;old_locus_tag=AD08_1190 NZ_JHDJ01000132.1 Protein Homology CDS 122724 123851 . + 0 ID=cds-WP_000154398.1;Parent=gene-AD08_RS16385;Dbxref=Genbank:WP_000154398.1;Name=WP_000154398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415537.1;locus_tag=AD08_RS16385;product=iron uptake system protein EfeO;protein_id=WP_000154398.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 123857 125128 . + . ID=gene-AD08_RS16380;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=AD08_RS16380;old_locus_tag=AD08_1191 NZ_JHDJ01000132.1 Protein Homology CDS 123857 125128 . + 0 ID=cds-WP_032218428.1;Parent=gene-AD08_RS16380;Dbxref=Genbank:WP_032218428.1;Name=WP_032218428.1;gbkey=CDS;gene=efeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415538.1;locus_tag=AD08_RS16380;product=deferrochelatase/peroxidase EfeB;protein_id=WP_032218428.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 125473 126537 . + . ID=gene-AD08_RS16375;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=AD08_RS16375;old_locus_tag=AD08_1192 NZ_JHDJ01000132.1 Protein Homology CDS 125473 126537 . + 0 ID=cds-WP_000258765.1;Parent=gene-AD08_RS16375;Dbxref=Genbank:WP_000258765.1;Name=WP_000258765.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309293.1;locus_tag=AD08_RS16375;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000258765.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq gene 126587 127000 . - . ID=gene-AD08_RS16370;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;locus_tag=AD08_RS16370;old_locus_tag=AD08_1193 NZ_JHDJ01000132.1 Protein Homology CDS 126587 127000 . - 0 ID=cds-WP_001061095.1;Parent=gene-AD08_RS16370;Dbxref=Genbank:WP_001061095.1;Name=WP_001061095.1;gbkey=CDS;gene=pgaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309294.1;locus_tag=AD08_RS16370;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_001061095.1;transl_table=11 NZ_JHDJ01000132.1 RefSeq pseudogene 127002 128093 . - . ID=gene-AD08_RS0125405;Name=pgaC;end_range=128093,.;gbkey=Gene;gene=pgaC;gene_biotype=pseudogene;locus_tag=AD08_RS0125405;partial=true;pseudo=true NZ_JHDJ01000132.1 Protein Homology CDS 127002 128093 . - 0 ID=cds-AD08_RS0125405;Parent=gene-AD08_RS0125405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=128093,.;gbkey=CDS;gene=pgaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415541.1;locus_tag=AD08_RS0125405;partial=true;product=poly-beta-1%2C6 N-acetyl-D-glucosamine synthase;pseudo=true;transl_table=11 NZ_JHDJ01000132.1 RefSeq pseudogene 128100 128433 . - . ID=gene-AD08_RS16365;Name=AD08_RS16365;end_range=128433,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS16365;old_locus_tag=AD08_1195;partial=true;pseudo=true NZ_JHDJ01000132.1 Protein Homology CDS 128100 128433 . - 1 ID=cds-AD08_RS16365;Parent=gene-AD08_RS16365;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=128433,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS16365;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000133.1 1 2433 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000133.1 RefSeq region 1 2433 . + . ID=NZ_JHDJ01000133.1:1..2433;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000133.1 RefSeq gene 1 1306 . + . ID=gene-AD08_RS16360;Name=AD08_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16360;old_locus_tag=AD08_1196;partial=true;start_range=.,1 NZ_JHDJ01000133.1 Protein Homology CDS 1 1306 . + 1 ID=cds-WP_032218432.1;Parent=gene-AD08_RS16360;Dbxref=Genbank:WP_032218432.1;Name=WP_032218432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312938.1;locus_tag=AD08_RS16360;partial=true;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_032218432.1;start_range=.,1;transl_table=11 NZ_JHDJ01000133.1 RefSeq gene 1519 2025 . + . ID=gene-AD08_RS16355;Name=AD08_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16355;old_locus_tag=AD08_1197 NZ_JHDJ01000133.1 Protein Homology CDS 1519 2025 . + 0 ID=cds-WP_032218433.1;Parent=gene-AD08_RS16355;Dbxref=Genbank:WP_032218433.1;Name=WP_032218433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418416.1;locus_tag=AD08_RS16355;product=stationary phase growth adaptation protein;protein_id=WP_032218433.1;transl_table=11 NZ_JHDJ01000133.1 RefSeq pseudogene 2019 2433 . - . ID=gene-AD08_RS16350;Name=AD08_RS16350;end_range=2433,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS16350;old_locus_tag=AD08_1198;partial=true;pseudo=true NZ_JHDJ01000133.1 Protein Homology CDS 2019 2433 . - 1 ID=cds-AD08_RS16350;Parent=gene-AD08_RS16350;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2433,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS16350;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000134.1 1 4882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000134.1 RefSeq region 1 4882 . + . ID=NZ_JHDJ01000134.1:1..4882;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000134.1 RefSeq pseudogene 1 382 . - . ID=gene-AD08_RS0125410;Name=AD08_RS0125410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125410;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000134.1 Protein Homology CDS 1 382 . - 0 ID=cds-AD08_RS0125410;Parent=gene-AD08_RS0125410;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS0125410;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000134.1 RefSeq pseudogene 441 1553 . - . ID=gene-AD08_RS16340;Name=AD08_RS16340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS16340;old_locus_tag=AD08_1200;partial=true;pseudo=true;start_range=.,441 NZ_JHDJ01000134.1 Protein Homology CDS 441 1553 . - 0 ID=cds-AD08_RS16340;Parent=gene-AD08_RS16340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232187.1;locus_tag=AD08_RS16340;partial=true;product=phage tail protein;pseudo=true;start_range=.,441;transl_table=11 NZ_JHDJ01000134.1 RefSeq gene 1704 2303 . - . ID=gene-AD08_RS16335;Name=AD08_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16335;old_locus_tag=AD08_1202 NZ_JHDJ01000134.1 Protein Homology CDS 1704 2303 . - 0 ID=cds-WP_032217644.1-3;Parent=gene-AD08_RS16335;Dbxref=Genbank:WP_032217644.1;Name=WP_032217644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308870.1;locus_tag=AD08_RS16335;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_032217644.1;transl_table=11 NZ_JHDJ01000134.1 RefSeq gene 2371 4878 . - . ID=gene-AD08_RS16330;Name=AD08_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16330;old_locus_tag=AD08_1203 NZ_JHDJ01000134.1 Protein Homology CDS 2371 4878 . - 0 ID=cds-WP_162752716.1;Parent=gene-AD08_RS16330;Dbxref=Genbank:WP_162752716.1;Name=WP_162752716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_305452.1;locus_tag=AD08_RS16330;product=host specificity protein J;protein_id=WP_162752716.1;transl_table=11 ##sequence-region NZ_JHDJ01000135.1 1 6380 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000135.1 RefSeq region 1 6380 . + . ID=NZ_JHDJ01000135.1:1..6380;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000135.1 RefSeq gene 1 265 . - . ID=gene-AD08_RS16325;Name=AD08_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16325;old_locus_tag=AD08_1204;partial=true;start_range=.,1 NZ_JHDJ01000135.1 Protein Homology CDS 1 265 . - 0 ID=cds-WP_001407602.1;Parent=gene-AD08_RS16325;Dbxref=Genbank:WP_001407602.1;Name=WP_001407602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS16325;partial=true;product=InsA protein;protein_id=WP_001407602.1;start_range=.,1;transl_table=11 NZ_JHDJ01000135.1 RefSeq gene 294 1085 . - . ID=gene-AD08_RS16320;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=AD08_RS16320;old_locus_tag=AD08_1205 NZ_JHDJ01000135.1 Protein Homology CDS 294 1085 . - 0 ID=cds-WP_032218439.1;Parent=gene-AD08_RS16320;Dbxref=Genbank:WP_032218439.1;Name=WP_032218439.1;gbkey=CDS;gene=pgaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244501.1;locus_tag=AD08_RS16320;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_032218439.1;transl_table=11 NZ_JHDJ01000135.1 RefSeq gene 1094 3517 . - . ID=gene-AD08_RS16315;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;locus_tag=AD08_RS16315;old_locus_tag=AD08_1206 NZ_JHDJ01000135.1 Protein Homology CDS 1094 3517 . - 0 ID=cds-WP_001475239.1;Parent=gene-AD08_RS16315;Dbxref=Genbank:WP_001475239.1;Name=WP_001475239.1;gbkey=CDS;gene=pgaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309297.1;locus_tag=AD08_RS16315;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;protein_id=WP_001475239.1;transl_table=11 NZ_JHDJ01000135.1 RefSeq gene 4104 5462 . + . ID=gene-AD08_RS16310;Name=AD08_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16310;old_locus_tag=AD08_1207 NZ_JHDJ01000135.1 Protein Homology CDS 4104 5462 . + 0 ID=cds-WP_032218441.1;Parent=gene-AD08_RS16310;Dbxref=Genbank:WP_032218441.1;Name=WP_032218441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415544.1;locus_tag=AD08_RS16310;product=GGDEF domain-containing protein;protein_id=WP_032218441.1;transl_table=11 NZ_JHDJ01000135.1 RefSeq gene 5503 6369 . - . ID=gene-AD08_RS16305;Name=AD08_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16305;old_locus_tag=AD08_1208 NZ_JHDJ01000135.1 Protein Homology CDS 5503 6369 . - 0 ID=cds-WP_000878218.1-3;Parent=gene-AD08_RS16305;Dbxref=Genbank:WP_000878218.1;Name=WP_000878218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707076.1;locus_tag=AD08_RS16305;product=IS3 family transposase;protein_id=WP_000878218.1;transl_table=11 ##sequence-region NZ_JHDJ01000136.1 1 1437 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000136.1 RefSeq region 1 1437 . + . ID=NZ_JHDJ01000136.1:1..1437;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000136.1 cmsearch sequence_feature 1 58 . - . ID=id-NZ_JHDJ01000136.1:1..58;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;partial=true;start_range=.,1 NZ_JHDJ01000136.1 RefSeq pseudogene 16 339 . - . ID=gene-AD08_RS16300;Name=AD08_RS16300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS16300;old_locus_tag=AD08_1209;partial=true;pseudo=true;start_range=.,16 NZ_JHDJ01000136.1 Protein Homology CDS 16 339 . - 0 ID=cds-AD08_RS16300;Parent=gene-AD08_RS16300;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS16300;partial=true;product=transposase;pseudo=true;start_range=.,16;transl_table=11 NZ_JHDJ01000136.1 RefSeq pseudogene 395 1093 . + . ID=gene-AD08_RS0125415;Name=AD08_RS0125415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125415;partial=true;pseudo=true;start_range=.,395 NZ_JHDJ01000136.1 Protein Homology CDS 395 1093 . + 0 ID=cds-AD08_RS0125415;Parent=gene-AD08_RS0125415;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415922.1;locus_tag=AD08_RS0125415;partial=true;product=IS30-like element IS30 family transposase;pseudo=true;start_range=.,395;transl_table=11 NZ_JHDJ01000136.1 RefSeq pseudogene 1106 1372 . - . ID=gene-AD08_RS0125420;Name=AD08_RS0125420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125420;partial=true;pseudo=true;start_range=.,1106 NZ_JHDJ01000136.1 Protein Homology CDS 1106 1372 . - 0 ID=cds-AD08_RS0125420;Parent=gene-AD08_RS0125420;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD08_RS0125420;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1106;transl_table=11 ##sequence-region NZ_JHDJ01000137.1 1 30191 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000137.1 RefSeq region 1 30191 . + . ID=NZ_JHDJ01000137.1:1..30191;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000137.1 RefSeq gene 60 383 . + . ID=gene-AD08_RS16295;Name=AD08_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16295;old_locus_tag=AD08_1212 NZ_JHDJ01000137.1 Protein Homology CDS 60 383 . + 0 ID=cds-WP_000389396.1-2;Parent=gene-AD08_RS16295;Dbxref=Genbank:WP_000389396.1;Name=WP_000389396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389393.1;locus_tag=AD08_RS16295;product=ACP S-malonyltransferase;protein_id=WP_000389396.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 364 1365 . + . ID=gene-AD08_RS0125425;Name=AD08_RS0125425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125425 NZ_JHDJ01000137.1 Protein Homology CDS 364 1365 . + 0 ID=cds-WP_032217532.1-2;Parent=gene-AD08_RS0125425;Dbxref=Genbank:WP_032217532.1;Name=WP_032217532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415548.1;locus_tag=AD08_RS0125425;product=hypothetical protein;protein_id=WP_032217532.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 1739 1875 . - . ID=gene-AD08_RS27485;Name=AD08_RS27485;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD08_RS27485 NZ_JHDJ01000137.1 cmsearch ncRNA 1739 1875 . - . ID=rna-AD08_RS27485;Parent=gene-AD08_RS27485;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27485;product=RtT sRNA NZ_JHDJ01000137.1 cmsearch exon 1739 1875 . - . ID=exon-AD08_RS27485-1;Parent=rna-AD08_RS27485;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27485;product=RtT sRNA NZ_JHDJ01000137.1 RefSeq gene 1920 2007 . - . ID=gene-AD08_RS16290;Name=AD08_RS16290;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS16290;old_locus_tag=AD08_1214 NZ_JHDJ01000137.1 tRNAscan-SE tRNA 1920 2007 . - . ID=rna-AD08_RS16290;Parent=gene-AD08_RS16290;anticodon=(pos:complement(1971..1973));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS16290;product=tRNA-Ser NZ_JHDJ01000137.1 tRNAscan-SE exon 1920 2007 . - . ID=exon-AD08_RS16290-1;Parent=rna-AD08_RS16290;anticodon=(pos:complement(1971..1973));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS16290;product=tRNA-Ser NZ_JHDJ01000137.1 RefSeq gene 2241 3179 . + . ID=gene-AD08_RS16285;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=AD08_RS16285;old_locus_tag=AD08_1215 NZ_JHDJ01000137.1 Protein Homology CDS 2241 3179 . + 0 ID=cds-WP_000351317.1;Parent=gene-AD08_RS16285;Dbxref=Genbank:WP_000351317.1;Name=WP_000351317.1;gbkey=CDS;gene=ghrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415551.2;locus_tag=AD08_RS16285;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000351317.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 3234 3971 . + . ID=gene-AD08_RS16280;Name=AD08_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16280;old_locus_tag=AD08_1216 NZ_JHDJ01000137.1 Protein Homology CDS 3234 3971 . + 0 ID=cds-WP_000283667.1;Parent=gene-AD08_RS16280;Dbxref=Genbank:WP_000283667.1;Name=WP_000283667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415552.1;locus_tag=AD08_RS16280;product=zinc-binding phosphatase;protein_id=WP_000283667.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 3995 4549 . + . ID=gene-AD08_RS16275;Name=AD08_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16275;old_locus_tag=AD08_1217 NZ_JHDJ01000137.1 Protein Homology CDS 3995 4549 . + 0 ID=cds-WP_001001921.1;Parent=gene-AD08_RS16275;Dbxref=Genbank:WP_001001921.1;Name=WP_001001921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415553.1;locus_tag=AD08_RS16275;product=molecular chaperone YcdY;protein_id=WP_001001921.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 4651 5142 . + . ID=gene-AD08_RS16270;Name=AD08_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16270;old_locus_tag=AD08_1218 NZ_JHDJ01000137.1 Protein Homology CDS 4651 5142 . + 0 ID=cds-WP_001300785.1;Parent=gene-AD08_RS16270;Dbxref=Genbank:WP_001300785.1;Name=WP_001300785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415554.4;locus_tag=AD08_RS16270;product=DUF1097 domain-containing protein;protein_id=WP_001300785.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 5206 6039 . - . ID=gene-AD08_RS16265;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=AD08_RS16265;old_locus_tag=AD08_1219 NZ_JHDJ01000137.1 Protein Homology CDS 5206 6039 . - 0 ID=cds-WP_001189321.1;Parent=gene-AD08_RS16265;Dbxref=Genbank:WP_001189321.1;Name=WP_001189321.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309441.1;locus_tag=AD08_RS16265;product=curli production assembly/transport protein CsgG;protein_id=WP_001189321.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 6066 6482 . - . ID=gene-AD08_RS16260;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=AD08_RS16260;old_locus_tag=AD08_1220 NZ_JHDJ01000137.1 Protein Homology CDS 6066 6482 . - 0 ID=cds-WP_001264088.1;Parent=gene-AD08_RS16260;Dbxref=Genbank:WP_001264088.1;Name=WP_001264088.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309442.1;locus_tag=AD08_RS16260;product=curli production assembly/transport protein CsgF;protein_id=WP_001264088.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 6507 6896 . - . ID=gene-AD08_RS16255;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=AD08_RS16255;old_locus_tag=AD08_1221 NZ_JHDJ01000137.1 Protein Homology CDS 6507 6896 . - 0 ID=cds-WP_000833288.1;Parent=gene-AD08_RS16255;Dbxref=Genbank:WP_000833288.1;Name=WP_000833288.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309443.1;locus_tag=AD08_RS16255;product=curli production assembly/transport protein CsgE;protein_id=WP_000833288.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 6901 7551 . - . ID=gene-AD08_RS16250;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=AD08_RS16250;old_locus_tag=AD08_1222 NZ_JHDJ01000137.1 Protein Homology CDS 6901 7551 . - 0 ID=cds-WP_000481509.1;Parent=gene-AD08_RS16250;Dbxref=Genbank:WP_000481509.1;Name=WP_000481509.1;gbkey=CDS;gene=csgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415558.1;locus_tag=AD08_RS16250;product=transcriptional regulator CsgD;protein_id=WP_000481509.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 8306 8761 . + . ID=gene-AD08_RS16240;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=AD08_RS16240;old_locus_tag=AD08_1225 NZ_JHDJ01000137.1 Protein Homology CDS 8306 8761 . + 0 ID=cds-WP_000791650.1;Parent=gene-AD08_RS16240;Dbxref=Genbank:WP_000791650.1;Name=WP_000791650.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309446.1;locus_tag=AD08_RS16240;product=curlin minor subunit CsgB;protein_id=WP_000791650.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 8802 9257 . + . ID=gene-AD08_RS16235;Name=AD08_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16235;old_locus_tag=AD08_1226 NZ_JHDJ01000137.1 Protein Homology CDS 8802 9257 . + 0 ID=cds-WP_000771437.1;Parent=gene-AD08_RS16235;Dbxref=Genbank:WP_000771437.1;Name=WP_000771437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415560.1;locus_tag=AD08_RS16235;product=curlin major subunit CsgA;protein_id=WP_000771437.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 9316 9648 . + . ID=gene-AD08_RS16230;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=AD08_RS16230;old_locus_tag=AD08_1227 NZ_JHDJ01000137.1 Protein Homology CDS 9316 9648 . + 0 ID=cds-WP_001094300.1;Parent=gene-AD08_RS16230;Dbxref=Genbank:WP_001094300.1;Name=WP_001094300.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415561.1;locus_tag=AD08_RS16230;product=curli assembly protein CsgC;protein_id=WP_001094300.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 9769 10080 . + . ID=gene-AD08_RS16225;Name=AD08_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16225;old_locus_tag=AD08_1228 NZ_JHDJ01000137.1 Protein Homology CDS 9769 10080 . + 0 ID=cds-WP_000489587.1;Parent=gene-AD08_RS16225;Dbxref=Genbank:WP_000489587.1;Name=WP_000489587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415562.1;locus_tag=AD08_RS16225;product=hypothetical protein;protein_id=WP_000489587.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 10175 10708 . + . ID=gene-AD08_RS16220;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=AD08_RS16220;old_locus_tag=AD08_1229 NZ_JHDJ01000137.1 Protein Homology CDS 10175 10708 . + 0 ID=cds-WP_000857405.1;Parent=gene-AD08_RS16220;Dbxref=Genbank:WP_000857405.1;Name=WP_000857405.1;gbkey=CDS;gene=ymdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309450.1;locus_tag=AD08_RS16220;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000857405.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 10650 12131 . + . ID=gene-AD08_RS16215;Name=AD08_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16215;old_locus_tag=AD08_1230 NZ_JHDJ01000137.1 Protein Homology CDS 10650 12131 . + 0 ID=cds-WP_162752695.1;Parent=gene-AD08_RS16215;Dbxref=Genbank:WP_162752695.1;Name=WP_162752695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=AD08_RS16215;product=cardiolipin synthase ClsC;protein_id=WP_162752695.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 12139 13296 . - . ID=gene-AD08_RS16210;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=AD08_RS16210;old_locus_tag=AD08_1231 NZ_JHDJ01000137.1 Protein Homology CDS 12139 13296 . - 0 ID=cds-WP_001070375.1;Parent=gene-AD08_RS16210;Dbxref=Genbank:WP_001070375.1;Name=WP_001070375.1;gbkey=CDS;gene=mdoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415565.1;locus_tag=AD08_RS16210;product=glucans biosynthesis protein MdoC;protein_id=WP_001070375.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 13690 15225 . + . ID=gene-AD08_RS16200;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=AD08_RS16200;old_locus_tag=AD08_1233 NZ_JHDJ01000137.1 Protein Homology CDS 13690 15225 . + 0 ID=cds-WP_001343212.1;Parent=gene-AD08_RS16200;Dbxref=Genbank:WP_001343212.1;Name=WP_001343212.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415566.1;locus_tag=AD08_RS16200;product=glucans biosynthesis protein MdoG;protein_id=WP_001343212.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 15218 17761 . + . ID=gene-AD08_RS16195;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=AD08_RS16195;old_locus_tag=AD08_1234 NZ_JHDJ01000137.1 Protein Homology CDS 15218 17761 . + 0 ID=cds-WP_001295445.1;Parent=gene-AD08_RS16195;Dbxref=Genbank:WP_001295445.1;Name=WP_001295445.1;gbkey=CDS;gene=mdoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415567.1;locus_tag=AD08_RS16195;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001295445.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 17934 18161 . + . ID=gene-AD08_RS16190;Name=AD08_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16190;old_locus_tag=AD08_1235 NZ_JHDJ01000137.1 Protein Homology CDS 17934 18161 . + 0 ID=cds-WP_001237205.1;Parent=gene-AD08_RS16190;Dbxref=Genbank:WP_001237205.1;Name=WP_001237205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309455.1;locus_tag=AD08_RS16190;product=YceK/YidQ family lipoprotein;protein_id=WP_001237205.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 18162 18536 . - . ID=gene-AD08_RS16185;Name=AD08_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16185;old_locus_tag=AD08_1236 NZ_JHDJ01000137.1 Protein Homology CDS 18162 18536 . - 0 ID=cds-WP_000180056.1;Parent=gene-AD08_RS16185;Dbxref=Genbank:WP_000180056.1;Name=WP_000180056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309456.2;locus_tag=AD08_RS16185;product=acidic protein MsyB;protein_id=WP_000180056.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 18619 19845 . - . ID=gene-AD08_RS16180;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=AD08_RS16180;old_locus_tag=AD08_1237 NZ_JHDJ01000137.1 Protein Homology CDS 18619 19845 . - 0 ID=cds-WP_000074172.1;Parent=gene-AD08_RS16180;Dbxref=Genbank:WP_000074172.1;Name=WP_000074172.1;gbkey=CDS;gene=mdtG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415571.1;locus_tag=AD08_RS16180;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000074172.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 20017 20937 . - . ID=gene-AD08_RS16175;Name=AD08_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16175;old_locus_tag=AD08_1238 NZ_JHDJ01000137.1 Protein Homology CDS 20017 20937 . - 0 ID=cds-WP_032218448.1;Parent=gene-AD08_RS16175;Dbxref=Genbank:WP_032218448.1;Name=WP_032218448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309459.1;locus_tag=AD08_RS16175;product=kdo(2)-lipid IV(A) lauroyltransferase;protein_id=WP_032218448.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 21162 22214 . + . ID=gene-AD08_RS16170;Name=AD08_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16170;old_locus_tag=AD08_1239 NZ_JHDJ01000137.1 Protein Homology CDS 21162 22214 . + 0 ID=cds-WP_001144615.1;Parent=gene-AD08_RS16170;Dbxref=Genbank:WP_001144615.1;Name=WP_001144615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415573.1;locus_tag=AD08_RS16170;product=rhodanese-related sulfurtransferase;protein_id=WP_001144615.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 22256 22831 . - . ID=gene-AD08_RS16165;Name=AD08_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16165;old_locus_tag=AD08_1240 NZ_JHDJ01000137.1 Protein Homology CDS 22256 22831 . - 0 ID=cds-WP_000749261.1;Parent=gene-AD08_RS16165;Dbxref=Genbank:WP_000749261.1;Name=WP_000749261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309461.1;locus_tag=AD08_RS16165;product=YceI family protein;protein_id=WP_000749261.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 22835 23401 . - . ID=gene-AD08_RS16160;Name=AD08_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16160;old_locus_tag=AD08_1241 NZ_JHDJ01000137.1 Protein Homology CDS 22835 23401 . - 0 ID=cds-WP_000011114.1;Parent=gene-AD08_RS16160;Dbxref=Genbank:WP_000011114.1;Name=WP_000011114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415575.1;locus_tag=AD08_RS16160;product=cytochrome b;protein_id=WP_000011114.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 23662 23775 . - . ID=gene-AD08_RS16155;Name=AD08_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16155;old_locus_tag=AD08_1243 NZ_JHDJ01000137.1 Protein Homology CDS 23662 23775 . - 0 ID=cds-WP_001253418.1;Parent=gene-AD08_RS16155;Dbxref=Genbank:WP_001253418.1;Name=WP_001253418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706980.2;locus_tag=AD08_RS16155;product=DUF2770 family protein;protein_id=WP_001253418.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 23823 24941 . - . ID=gene-AD08_RS16150;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=AD08_RS16150;old_locus_tag=AD08_1244 NZ_JHDJ01000137.1 Protein Homology CDS 23823 24941 . - 0 ID=cds-WP_000872833.1;Parent=gene-AD08_RS16150;Dbxref=Genbank:WP_000872833.1;Name=WP_000872833.1;gbkey=CDS;gene=solA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415577.1;locus_tag=AD08_RS16150;product=N-methyl-L-tryptophan oxidase;protein_id=WP_000872833.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 25056 25310 . - . ID=gene-AD08_RS16145;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=AD08_RS16145;old_locus_tag=AD08_1245 NZ_JHDJ01000137.1 Protein Homology CDS 25056 25310 . - 0 ID=cds-WP_000414438.1;Parent=gene-AD08_RS16145;Dbxref=Genbank:WP_000414438.1;Name=WP_000414438.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415578.3;locus_tag=AD08_RS16145;product=biofilm formation regulator BssS;protein_id=WP_000414438.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 25598 25843 . - . ID=gene-AD08_RS16140;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=AD08_RS16140;old_locus_tag=AD08_1246 NZ_JHDJ01000137.1 Protein Homology CDS 25598 25843 . - 0 ID=cds-WP_001217754.1;Parent=gene-AD08_RS16140;Dbxref=Genbank:WP_001217754.1;Name=WP_001217754.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309466.1;locus_tag=AD08_RS16140;product=DNA damage-inducible protein I;protein_id=WP_001217754.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 25917 26963 . - . ID=gene-AD08_RS16135;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=AD08_RS16135;old_locus_tag=AD08_1247 NZ_JHDJ01000137.1 Protein Homology CDS 25917 26963 . - 0 ID=cds-WP_000126534.1;Parent=gene-AD08_RS16135;Dbxref=Genbank:WP_000126534.1;Name=WP_000126534.1;gbkey=CDS;gene=pyrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415580.1;locus_tag=AD08_RS16135;product=dihydroorotase;protein_id=WP_000126534.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 27069 27629 . - . ID=gene-AD08_RS16130;Name=AD08_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16130;old_locus_tag=AD08_1248 NZ_JHDJ01000137.1 Protein Homology CDS 27069 27629 . - 0 ID=cds-WP_001295443.1;Parent=gene-AD08_RS16130;Dbxref=Genbank:WP_001295443.1;Name=WP_001295443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415581.1;locus_tag=AD08_RS16130;product=lipoprotein;protein_id=WP_001295443.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 27763 28410 . - . ID=gene-AD08_RS16125;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=AD08_RS16125;old_locus_tag=AD08_1249 NZ_JHDJ01000137.1 Protein Homology CDS 27763 28410 . - 0 ID=cds-WP_001468576.1;Parent=gene-AD08_RS16125;Dbxref=Genbank:WP_001468576.1;Name=WP_001468576.1;gbkey=CDS;gene=grxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309469.1;locus_tag=AD08_RS16125;product=glutaredoxin 2;protein_id=WP_001468576.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq gene 28474 29682 . - . ID=gene-AD08_RS16120;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=AD08_RS16120;old_locus_tag=AD08_1250 NZ_JHDJ01000137.1 Protein Homology CDS 28474 29682 . - 0 ID=cds-WP_000092206.1;Parent=gene-AD08_RS16120;Dbxref=Genbank:WP_000092206.1;Name=WP_000092206.1;gbkey=CDS;gene=mdtH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415583.4;locus_tag=AD08_RS16120;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092206.1;transl_table=11 NZ_JHDJ01000137.1 RefSeq pseudogene 29855 30191 . + . ID=gene-AD08_RS0125445;Name=AD08_RS0125445;end_range=30191,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125445;partial=true;pseudo=true NZ_JHDJ01000137.1 Protein Homology CDS 29855 30191 . + 0 ID=cds-AD08_RS0125445;Parent=gene-AD08_RS0125445;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=30191,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS0125445;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000138.1 1 56882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000138.1 RefSeq region 1 56882 . + . ID=NZ_JHDJ01000138.1:1..56882;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000138.1 RefSeq pseudogene 1 372 . + . ID=gene-AD08_RS16115;Name=AD08_RS16115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS16115;old_locus_tag=AD08_1252;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000138.1 Protein Homology CDS 1 372 . + 0 ID=cds-AD08_RS16115;Parent=gene-AD08_RS16115;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS16115;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 515 1099 . + . ID=gene-AD08_RS16110;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=AD08_RS16110;old_locus_tag=AD08_1253 NZ_JHDJ01000138.1 Protein Homology CDS 515 1099 . + 0 ID=cds-WP_000468186.1;Parent=gene-AD08_RS16110;Dbxref=Genbank:WP_000468186.1;Name=WP_000468186.1;gbkey=CDS;gene=rimJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309471.1;locus_tag=AD08_RS16110;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468186.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 1110 1757 . + . ID=gene-AD08_RS16105;Name=AD08_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16105;old_locus_tag=AD08_1254 NZ_JHDJ01000138.1 Protein Homology CDS 1110 1757 . + 0 ID=cds-WP_000877107.1;Parent=gene-AD08_RS16105;Dbxref=Genbank:WP_000877107.1;Name=WP_000877107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415585.1;locus_tag=AD08_RS16105;product=YceH family protein;protein_id=WP_000877107.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 1759 2682 . + . ID=gene-AD08_RS16100;Name=AD08_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16100;old_locus_tag=AD08_1255 NZ_JHDJ01000138.1 Protein Homology CDS 1759 2682 . + 0 ID=cds-WP_000736150.1;Parent=gene-AD08_RS16100;Dbxref=Genbank:WP_000736150.1;Name=WP_000736150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415586.1;locus_tag=AD08_RS16100;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_000736150.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 2792 4327 . + . ID=gene-AD08_RS16095;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=AD08_RS16095;old_locus_tag=AD08_1256 NZ_JHDJ01000138.1 Protein Homology CDS 2792 4327 . + 0 ID=cds-WP_001050683.1;Parent=gene-AD08_RS16095;Dbxref=Genbank:WP_001050683.1;Name=WP_001050683.1;gbkey=CDS;gene=murJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309474.1;locus_tag=AD08_RS16095;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001050683.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 4367 4783 . - . ID=gene-AD08_RS16090;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=AD08_RS16090;old_locus_tag=AD08_1257 NZ_JHDJ01000138.1 Protein Homology CDS 4367 4783 . - 0 ID=cds-WP_000197363.1;Parent=gene-AD08_RS16090;Dbxref=Genbank:WP_000197363.1;Name=WP_000197363.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415588.1;locus_tag=AD08_RS16090;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197363.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 4788 5081 . - . ID=gene-AD08_RS16085;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=AD08_RS16085;old_locus_tag=AD08_1258 NZ_JHDJ01000138.1 Protein Homology CDS 4788 5081 . - 0 ID=cds-WP_000020880.1;Parent=gene-AD08_RS16085;Dbxref=Genbank:WP_000020880.1;Name=WP_000020880.1;gbkey=CDS;gene=flgM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415589.1;locus_tag=AD08_RS16085;product=anti-sigma-28 factor FlgM;protein_id=WP_000020880.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 5157 5816 . - . ID=gene-AD08_RS0125455;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=AD08_RS0125455 NZ_JHDJ01000138.1 Protein Homology CDS 5157 5816 . - 0 ID=cds-WP_001547553.1;Parent=gene-AD08_RS0125455;Dbxref=Genbank:WP_001547553.1;Name=WP_001547553.1;gbkey=CDS;gene=flgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415590.1;locus_tag=AD08_RS0125455;product=flagellar basal body P-ring formation protein FlgA;protein_id=WP_001547553.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 5971 6387 . + . ID=gene-AD08_RS16080;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=AD08_RS16080;old_locus_tag=AD08_1261 NZ_JHDJ01000138.1 Protein Homology CDS 5971 6387 . + 0 ID=cds-WP_000884702.1;Parent=gene-AD08_RS16080;Dbxref=Genbank:WP_000884702.1;Name=WP_000884702.1;gbkey=CDS;gene=flgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415591.1;locus_tag=AD08_RS16080;product=flagellar basal body rod protein FlgB;protein_id=WP_000884702.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 6391 6795 . + . ID=gene-AD08_RS16075;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=AD08_RS16075;old_locus_tag=AD08_1262 NZ_JHDJ01000138.1 Protein Homology CDS 6391 6795 . + 0 ID=cds-WP_001196460.1;Parent=gene-AD08_RS16075;Dbxref=Genbank:WP_001196460.1;Name=WP_001196460.1;gbkey=CDS;gene=flgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=AD08_RS16075;product=flagellar basal body rod protein FlgC;protein_id=WP_001196460.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 6807 7502 . + . ID=gene-AD08_RS16070;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=AD08_RS16070;old_locus_tag=AD08_1263 NZ_JHDJ01000138.1 Protein Homology CDS 6807 7502 . + 0 ID=cds-WP_000020486.1;Parent=gene-AD08_RS16070;Dbxref=Genbank:WP_000020486.1;Name=WP_000020486.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415593.1;locus_tag=AD08_RS16070;product=flagellar hook assembly protein FlgD;protein_id=WP_000020486.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 7527 8735 . + . ID=gene-AD08_RS16065;Name=AD08_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16065;old_locus_tag=AD08_1264 NZ_JHDJ01000138.1 Protein Homology CDS 7527 8735 . + 0 ID=cds-WP_032218461.1;Parent=gene-AD08_RS16065;Dbxref=Genbank:WP_032218461.1;Name=WP_032218461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415594.1;locus_tag=AD08_RS16065;product=flagellar hook protein FlgE;protein_id=WP_032218461.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 8755 9510 . + . ID=gene-AD08_RS16060;Name=AD08_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16060;old_locus_tag=AD08_1265 NZ_JHDJ01000138.1 Protein Homology CDS 8755 9510 . + 0 ID=cds-WP_000349316.1;Parent=gene-AD08_RS16060;Dbxref=Genbank:WP_000349316.1;Name=WP_000349316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415595.1;locus_tag=AD08_RS16060;product=flagellar basal-body rod protein FlgF;protein_id=WP_000349316.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 9682 10464 . + . ID=gene-AD08_RS16055;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=AD08_RS16055;old_locus_tag=AD08_1266 NZ_JHDJ01000138.1 Protein Homology CDS 9682 10464 . + 0 ID=cds-WP_000625837.1;Parent=gene-AD08_RS16055;Dbxref=Genbank:WP_000625837.1;Name=WP_000625837.1;gbkey=CDS;gene=flgG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=AD08_RS16055;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625837.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 10517 11215 . + . ID=gene-AD08_RS16050;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=AD08_RS16050;old_locus_tag=AD08_1267 NZ_JHDJ01000138.1 Protein Homology CDS 10517 11215 . + 0 ID=cds-WP_001295442.1;Parent=gene-AD08_RS16050;Dbxref=Genbank:WP_001295442.1;Name=WP_001295442.1;gbkey=CDS;gene=flgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309484.1;locus_tag=AD08_RS16050;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001295442.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 11227 12324 . + . ID=gene-AD08_RS16045;Name=AD08_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16045;old_locus_tag=AD08_1268 NZ_JHDJ01000138.1 Protein Homology CDS 11227 12324 . + 0 ID=cds-WP_000589326.1;Parent=gene-AD08_RS16045;Dbxref=Genbank:WP_000589326.1;Name=WP_000589326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415598.3;locus_tag=AD08_RS16045;product=flagellar basal body P-ring protein FlgI;protein_id=WP_000589326.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 12324 13265 . + . ID=gene-AD08_RS16040;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=AD08_RS16040;old_locus_tag=AD08_1269 NZ_JHDJ01000138.1 Protein Homology CDS 12324 13265 . + 0 ID=cds-WP_001295441.1;Parent=gene-AD08_RS16040;Dbxref=Genbank:WP_001295441.1;Name=WP_001295441.1;gbkey=CDS;gene=flgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415599.1;locus_tag=AD08_RS16040;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_001295441.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 13331 14974 . + . ID=gene-AD08_RS16035;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=AD08_RS16035;old_locus_tag=AD08_1270 NZ_JHDJ01000138.1 Protein Homology CDS 13331 14974 . + 0 ID=cds-WP_000096479.1;Parent=gene-AD08_RS16035;Dbxref=Genbank:WP_000096479.1;Name=WP_000096479.1;gbkey=CDS;gene=flgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415600.1;locus_tag=AD08_RS16035;product=flagellar hook-associated protein FlgK;protein_id=WP_000096479.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 14986 15939 . + . ID=gene-AD08_RS16030;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=AD08_RS16030;old_locus_tag=AD08_1271 NZ_JHDJ01000138.1 Protein Homology CDS 14986 15939 . + 0 ID=cds-WP_001212782.1;Parent=gene-AD08_RS16030;Dbxref=Genbank:WP_001212782.1;Name=WP_001212782.1;gbkey=CDS;gene=flgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415601.1;locus_tag=AD08_RS16030;product=flagellar hook-filament junction protein FlgL;protein_id=WP_001212782.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 16135 19320 . - . ID=gene-AD08_RS16025;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=AD08_RS16025;old_locus_tag=AD08_1272 NZ_JHDJ01000138.1 Protein Homology CDS 16135 19320 . - 0 ID=cds-WP_000827360.1;Parent=gene-AD08_RS16025;Dbxref=Genbank:WP_000827360.1;Name=WP_000827360.1;gbkey=CDS;gene=rne;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415602.1;locus_tag=AD08_RS16025;product=ribonuclease E;protein_id=WP_000827360.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 19893 20852 . + . ID=gene-AD08_RS16020;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=AD08_RS16020;old_locus_tag=AD08_1274 NZ_JHDJ01000138.1 Protein Homology CDS 19893 20852 . + 0 ID=cds-WP_000846343.1;Parent=gene-AD08_RS16020;Dbxref=Genbank:WP_000846343.1;Name=WP_000846343.1;gbkey=CDS;gene=rluC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415604.1;locus_tag=AD08_RS16020;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846343.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 20964 21548 . - . ID=gene-AD08_RS16015;Name=yceF;gbkey=Gene;gene=yceF;gene_biotype=protein_coding;locus_tag=AD08_RS16015;old_locus_tag=AD08_1276 NZ_JHDJ01000138.1 Protein Homology CDS 20964 21548 . - 0 ID=cds-WP_001125202.1;Parent=gene-AD08_RS16015;Dbxref=Genbank:WP_001125202.1;Name=WP_001125202.1;gbkey=CDS;gene=yceF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415605.2;locus_tag=AD08_RS16015;product=7-methyl-GTP pyrophosphatase;protein_id=WP_001125202.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 21747 22268 . + . ID=gene-AD08_RS16010;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=AD08_RS16010;old_locus_tag=AD08_1277 NZ_JHDJ01000138.1 Protein Homology CDS 21747 22268 . + 0 ID=cds-WP_001174481.1;Parent=gene-AD08_RS16010;Dbxref=Genbank:WP_001174481.1;Name=WP_001174481.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=AD08_RS16010;product=23S rRNA accumulation protein YceD;protein_id=WP_001174481.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 22320 22493 . + . ID=gene-AD08_RS0125465;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AD08_RS0125465 NZ_JHDJ01000138.1 Protein Homology CDS 22320 22493 . + 0 ID=cds-WP_000290727.1;Parent=gene-AD08_RS0125465;Dbxref=Genbank:WP_000290727.1;Name=WP_000290727.1;gbkey=CDS;gene=rpmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=AD08_RS0125465;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 22574 23644 . + . ID=gene-AD08_RS16005;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=AD08_RS16005;old_locus_tag=AD08_1278 NZ_JHDJ01000138.1 Protein Homology CDS 22574 23644 . + 0 ID=cds-WP_000197578.1;Parent=gene-AD08_RS16005;Dbxref=Genbank:WP_000197578.1;Name=WP_000197578.1;gbkey=CDS;gene=plsX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415608.2;locus_tag=AD08_RS16005;product=phosphate acyltransferase PlsX;protein_id=WP_000197578.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 23712 24665 . + . ID=gene-AD08_RS16000;Name=AD08_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS16000;old_locus_tag=AD08_1279 NZ_JHDJ01000138.1 Protein Homology CDS 23712 24665 . + 0 ID=cds-WP_000288132.1;Parent=gene-AD08_RS16000;Dbxref=Genbank:WP_000288132.1;Name=WP_000288132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=AD08_RS16000;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288132.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 24681 25610 . + . ID=gene-AD08_RS15995;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=AD08_RS15995;old_locus_tag=AD08_1280 NZ_JHDJ01000138.1 Protein Homology CDS 24681 25610 . + 0 ID=cds-WP_000191372.1;Parent=gene-AD08_RS15995;Dbxref=Genbank:WP_000191372.1;Name=WP_000191372.1;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415610.1;locus_tag=AD08_RS15995;product=ACP S-malonyltransferase;protein_id=WP_000191372.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 25623 26357 . + . ID=gene-AD08_RS15990;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AD08_RS15990;old_locus_tag=AD08_1281 NZ_JHDJ01000138.1 Protein Homology CDS 25623 26357 . + 0 ID=cds-WP_001008535.1;Parent=gene-AD08_RS15990;Dbxref=Genbank:WP_001008535.1;Name=WP_001008535.1;gbkey=CDS;gene=fabG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=AD08_RS15990;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_001008535.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 26568 26804 . + . ID=gene-AD08_RS15985;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=AD08_RS15985;old_locus_tag=AD08_1282 NZ_JHDJ01000138.1 Protein Homology CDS 26568 26804 . + 0 ID=cds-WP_000103754.1;Parent=gene-AD08_RS15985;Dbxref=Genbank:WP_000103754.1;Name=WP_000103754.1;gbkey=CDS;gene=acpP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=AD08_RS15985;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 26892 28133 . + . ID=gene-AD08_RS15980;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=AD08_RS15980;old_locus_tag=AD08_1283 NZ_JHDJ01000138.1 Protein Homology CDS 26892 28133 . + 0 ID=cds-WP_000044679.1;Parent=gene-AD08_RS15980;Dbxref=Genbank:WP_000044679.1;Name=WP_000044679.1;gbkey=CDS;gene=fabF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=AD08_RS15980;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044679.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 28253 29062 . + . ID=gene-AD08_RS15975;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=AD08_RS15975;old_locus_tag=AD08_1284 NZ_JHDJ01000138.1 Protein Homology CDS 28253 29062 . + 0 ID=cds-WP_000478681.1;Parent=gene-AD08_RS15975;Dbxref=Genbank:WP_000478681.1;Name=WP_000478681.1;gbkey=CDS;gene=pabC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415614.1;locus_tag=AD08_RS15975;product=aminodeoxychorismate lyase;protein_id=WP_000478681.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 29065 30087 . + . ID=gene-AD08_RS15970;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=AD08_RS15970;old_locus_tag=AD08_1285 NZ_JHDJ01000138.1 Protein Homology CDS 29065 30087 . + 0 ID=cds-WP_000756827.1;Parent=gene-AD08_RS15970;Dbxref=Genbank:WP_000756827.1;Name=WP_000756827.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415615.1;locus_tag=AD08_RS15970;product=cell division protein YceG;protein_id=WP_000756827.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 30077 30718 . + . ID=gene-AD08_RS15965;Name=AD08_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15965;old_locus_tag=AD08_1286 NZ_JHDJ01000138.1 Protein Homology CDS 30077 30718 . + 0 ID=cds-WP_001257000.1;Parent=gene-AD08_RS15965;Dbxref=Genbank:WP_001257000.1;Name=WP_001257000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415616.1;locus_tag=AD08_RS15965;product=dTMP kinase;protein_id=WP_001257000.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 30715 31719 . + . ID=gene-AD08_RS15960;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=AD08_RS15960;old_locus_tag=AD08_1287 NZ_JHDJ01000138.1 Protein Homology CDS 30715 31719 . + 0 ID=cds-WP_001267956.1;Parent=gene-AD08_RS15960;Dbxref=Genbank:WP_001267956.1;Name=WP_001267956.1;gbkey=CDS;gene=holB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415617.1;locus_tag=AD08_RS15960;product=DNA polymerase III subunit delta';protein_id=WP_001267956.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 31730 32527 . + . ID=gene-AD08_RS15955;Name=AD08_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15955;old_locus_tag=AD08_1288 NZ_JHDJ01000138.1 Protein Homology CDS 31730 32527 . + 0 ID=cds-WP_000480245.1;Parent=gene-AD08_RS15955;Dbxref=Genbank:WP_000480245.1;Name=WP_000480245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309505.1;locus_tag=AD08_RS15955;product=metal-dependent hydrolase;protein_id=WP_000480245.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 32822 34255 . + . ID=gene-AD08_RS15950;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=AD08_RS15950;old_locus_tag=AD08_1289 NZ_JHDJ01000138.1 Protein Homology CDS 32822 34255 . + 0 ID=cds-WP_000475719.1;Parent=gene-AD08_RS15950;Dbxref=Genbank:WP_000475719.1;Name=WP_000475719.1;gbkey=CDS;gene=ptsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1;locus_tag=AD08_RS15950;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475719.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq pseudogene 34315 36503 . - . ID=gene-AD08_RS0125470;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=pseudogene;locus_tag=AD08_RS0125470;pseudo=true NZ_JHDJ01000138.1 Protein Homology CDS 34315 36503 . - 0 ID=cds-AD08_RS0125470;Parent=gene-AD08_RS0125470;Note=frameshifted;gbkey=CDS;gene=fhuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415620.1;locus_tag=AD08_RS0125470;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;pseudo=true;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 36837 37196 . + . ID=gene-AD08_RS15945;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=AD08_RS15945;old_locus_tag=AD08_1292 NZ_JHDJ01000138.1 Protein Homology CDS 36837 37196 . + 0 ID=cds-WP_000807125.1;Parent=gene-AD08_RS15945;Dbxref=Genbank:WP_000807125.1;Name=WP_000807125.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415621.3;locus_tag=AD08_RS15945;product=purine nucleoside phosphoramidase;protein_id=WP_000807125.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 37199 37576 . + . ID=gene-AD08_RS15940;Name=AD08_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15940;old_locus_tag=AD08_1293 NZ_JHDJ01000138.1 Protein Homology CDS 37199 37576 . + 0 ID=cds-WP_001225295.1;Parent=gene-AD08_RS15940;Dbxref=Genbank:WP_001225295.1;Name=WP_001225295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415622.1;locus_tag=AD08_RS15940;product=YcfL family protein;protein_id=WP_001225295.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 37590 38231 . + . ID=gene-AD08_RS15935;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=AD08_RS15935;old_locus_tag=AD08_1294 NZ_JHDJ01000138.1 Protein Homology CDS 37590 38231 . + 0 ID=cds-WP_000164439.1;Parent=gene-AD08_RS15935;Dbxref=Genbank:WP_000164439.1;Name=WP_000164439.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309510.1;locus_tag=AD08_RS15935;product=penicillin-binding protein activator LpoB;protein_id=WP_000164439.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 38212 39036 . + . ID=gene-AD08_RS15930;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=AD08_RS15930;old_locus_tag=AD08_1295 NZ_JHDJ01000138.1 Protein Homology CDS 38212 39036 . + 0 ID=cds-WP_001116592.1;Parent=gene-AD08_RS15930;Dbxref=Genbank:WP_001116592.1;Name=WP_001116592.1;gbkey=CDS;gene=thiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415624.1;locus_tag=AD08_RS15930;product=thiamine kinase;protein_id=WP_001116592.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 39047 40072 . + . ID=gene-AD08_RS15925;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=AD08_RS15925;old_locus_tag=AD08_1296 NZ_JHDJ01000138.1 Protein Homology CDS 39047 40072 . + 0 ID=cds-WP_000529320.1;Parent=gene-AD08_RS15925;Dbxref=Genbank:WP_000529320.1;Name=WP_000529320.1;gbkey=CDS;gene=nagZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415625.1;locus_tag=AD08_RS15925;product=beta-N-acetylhexosaminidase;protein_id=WP_000529320.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 40095 40637 . + . ID=gene-AD08_RS15920;Name=AD08_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15920;old_locus_tag=AD08_1297 NZ_JHDJ01000138.1 Protein Homology CDS 40095 40637 . + 0 ID=cds-WP_000587933.1;Parent=gene-AD08_RS15920;Dbxref=Genbank:WP_000587933.1;Name=WP_000587933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=AD08_RS15920;product=alpha/beta hydrolase;protein_id=WP_000587933.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 41037 42341 . + . ID=gene-AD08_RS15915;Name=AD08_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15915;old_locus_tag=AD08_1298 NZ_JHDJ01000138.1 Protein Homology CDS 41037 42341 . + 0 ID=cds-WP_000211045.1;Parent=gene-AD08_RS15915;Dbxref=Genbank:WP_000211045.1;Name=WP_000211045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415627.1;locus_tag=AD08_RS15915;product=NADH-quinone dehydrogenase;protein_id=WP_000211045.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 42551 43090 . + . ID=gene-AD08_RS15910;Name=AD08_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15910;old_locus_tag=AD08_1299 NZ_JHDJ01000138.1 Protein Homology CDS 42551 43090 . + 0 ID=cds-WP_001043459.1;Parent=gene-AD08_RS15910;Dbxref=Genbank:WP_001043459.1;Name=WP_001043459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415628.1;locus_tag=AD08_RS15910;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043459.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 43152 43784 . - . ID=gene-AD08_RS15905;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=AD08_RS15905;old_locus_tag=AD08_1300 NZ_JHDJ01000138.1 Protein Homology CDS 43152 43784 . - 0 ID=cds-WP_001336528.1;Parent=gene-AD08_RS15905;Dbxref=Genbank:WP_001336528.1;Name=WP_001336528.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415629.4;locus_tag=AD08_RS15905;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_001336528.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 44025 44282 . + . ID=gene-AD08_RS15900;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=AD08_RS15900;old_locus_tag=AD08_1301 NZ_JHDJ01000138.1 Protein Homology CDS 44025 44282 . + 0 ID=cds-WP_000800153.1;Parent=gene-AD08_RS15900;Dbxref=Genbank:WP_000800153.1;Name=WP_000800153.1;gbkey=CDS;gene=bhsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309517.1;locus_tag=AD08_RS15900;product=multiple stress resistance protein BhsA;protein_id=WP_000800153.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 44364 45326 . - . ID=gene-AD08_RS15895;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=AD08_RS15895;old_locus_tag=AD08_1302 NZ_JHDJ01000138.1 Protein Homology CDS 44364 45326 . - 0 ID=cds-WP_001300895.1;Parent=gene-AD08_RS15895;Dbxref=Genbank:WP_001300895.1;Name=WP_001300895.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415631.1;locus_tag=AD08_RS15895;product=L%2CD-transpeptidase LdtC;protein_id=WP_001300895.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 45470 48916 . - . ID=gene-AD08_RS15890;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=AD08_RS15890;old_locus_tag=AD08_1303 NZ_JHDJ01000138.1 Protein Homology CDS 45470 48916 . - 0 ID=cds-WP_001115094.1;Parent=gene-AD08_RS15890;Dbxref=Genbank:WP_001115094.1;Name=WP_001115094.1;gbkey=CDS;gene=mfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415632.1;locus_tag=AD08_RS15890;product=transcription-repair coupling factor;protein_id=WP_001115094.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 49044 50117 . - . ID=gene-AD08_RS15885;Name=AD08_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15885;old_locus_tag=AD08_1304 NZ_JHDJ01000138.1 Protein Homology CDS 49044 50117 . - 0 ID=cds-WP_000810253.1;Parent=gene-AD08_RS15885;Dbxref=Genbank:WP_000810253.1;Name=WP_000810253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415633.1;locus_tag=AD08_RS15885;product=acyltransferase family protein;protein_id=WP_000810253.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 50379 51578 . + . ID=gene-AD08_RS15880;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=AD08_RS15880;old_locus_tag=AD08_1305 NZ_JHDJ01000138.1 Protein Homology CDS 50379 51578 . + 0 ID=cds-WP_000284714.1;Parent=gene-AD08_RS15880;Dbxref=Genbank:WP_000284714.1;Name=WP_000284714.1;gbkey=CDS;gene=lolC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=AD08_RS15880;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_000284714.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 51571 52272 . + . ID=gene-AD08_RS15875;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=AD08_RS15875;old_locus_tag=AD08_1306 NZ_JHDJ01000138.1 Protein Homology CDS 51571 52272 . + 0 ID=cds-WP_001033694.1;Parent=gene-AD08_RS15875;Dbxref=Genbank:WP_001033694.1;Name=WP_001033694.1;gbkey=CDS;gene=lolD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415635.4;locus_tag=AD08_RS15875;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033694.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 52272 53516 . + . ID=gene-AD08_RS15870;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=AD08_RS15870;old_locus_tag=AD08_1307 NZ_JHDJ01000138.1 Protein Homology CDS 52272 53516 . + 0 ID=cds-WP_001251348.1;Parent=gene-AD08_RS15870;Dbxref=Genbank:WP_001251348.1;Name=WP_001251348.1;gbkey=CDS;gene=lolE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415636.1;locus_tag=AD08_RS15870;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_001251348.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 53545 54456 . + . ID=gene-AD08_RS15865;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=AD08_RS15865;old_locus_tag=AD08_1308 NZ_JHDJ01000138.1 Protein Homology CDS 53545 54456 . + 0 ID=cds-WP_000291270.1;Parent=gene-AD08_RS15865;Dbxref=Genbank:WP_000291270.1;Name=WP_000291270.1;gbkey=CDS;gene=nagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415637.1;locus_tag=AD08_RS15865;product=N-acetylglucosamine kinase;protein_id=WP_000291270.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 54472 55311 . + . ID=gene-AD08_RS15860;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=AD08_RS15860;old_locus_tag=AD08_1309 NZ_JHDJ01000138.1 Protein Homology CDS 54472 55311 . + 0 ID=cds-WP_000952737.1;Parent=gene-AD08_RS15860;Dbxref=Genbank:WP_000952737.1;Name=WP_000952737.1;gbkey=CDS;gene=cobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415638.3;locus_tag=AD08_RS15860;product=NAD-dependent protein deacylase;protein_id=WP_000952737.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq gene 55431 56219 . - . ID=gene-AD08_RS15855;Name=AD08_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15855;old_locus_tag=AD08_1310 NZ_JHDJ01000138.1 Protein Homology CDS 55431 56219 . - 0 ID=cds-WP_001397078.1;Parent=gene-AD08_RS15855;Dbxref=Genbank:WP_001397078.1;Name=WP_001397078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415639.1;locus_tag=AD08_RS15855;product=hypothetical protein;protein_id=WP_001397078.1;transl_table=11 NZ_JHDJ01000138.1 RefSeq pseudogene 56216 56422 . - . ID=gene-AD08_RS15850;Name=AD08_RS15850;end_range=56422,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS15850;old_locus_tag=AD08_1311;partial=true;pseudo=true NZ_JHDJ01000138.1 Protein Homology CDS 56216 56422 . - 0 ID=cds-AD08_RS15850;Parent=gene-AD08_RS15850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=56422,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415640.2;locus_tag=AD08_RS15850;partial=true;product=DUF3592 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDJ01000138.1 RefSeq pseudogene 56439 56882 . - . ID=gene-AD08_RS15845;Name=AD08_RS15845;end_range=56882,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS15845;old_locus_tag=AD08_1312;partial=true;pseudo=true NZ_JHDJ01000138.1 Protein Homology CDS 56439 56882 . - 0 ID=cds-AD08_RS15845;Parent=gene-AD08_RS15845;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=56882,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS15845;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000139.1 1 35792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000139.1 RefSeq region 1 35792 . + . ID=NZ_JHDJ01000139.1:1..35792;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000139.1 RefSeq pseudogene 17 289 . - . ID=gene-AD08_RS15840;Name=AD08_RS15840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS15840;old_locus_tag=AD08_1313;partial=true;pseudo=true;start_range=.,17 NZ_JHDJ01000139.1 Protein Homology CDS 17 289 . - 0 ID=cds-AD08_RS15840;Parent=gene-AD08_RS15840;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS15840;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,17;transl_table=11 NZ_JHDJ01000139.1 RefSeq pseudogene 343 606 . - . ID=gene-AD08_RS15835;Name=AD08_RS15835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS15835;old_locus_tag=AD08_1314;partial=true;pseudo=true;start_range=.,343 NZ_JHDJ01000139.1 Protein Homology CDS 343 606 . - 0 ID=cds-AD08_RS15835;Parent=gene-AD08_RS15835;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415640.2;locus_tag=AD08_RS15835;partial=true;product=DUF3592 domain-containing protein;pseudo=true;start_range=.,343;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 664 1710 . - . ID=gene-AD08_RS15830;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=AD08_RS15830;old_locus_tag=AD08_1315 NZ_JHDJ01000139.1 Protein Homology CDS 664 1710 . - 0 ID=cds-WP_000759317.1;Parent=gene-AD08_RS15830;Dbxref=Genbank:WP_000759317.1;Name=WP_000759317.1;gbkey=CDS;gene=potD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=AD08_RS15830;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759317.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 1707 2501 . - . ID=gene-AD08_RS15825;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=AD08_RS15825;old_locus_tag=AD08_1316 NZ_JHDJ01000139.1 Protein Homology CDS 1707 2501 . - 0 ID=cds-WP_000580316.1;Parent=gene-AD08_RS15825;Dbxref=Genbank:WP_000580316.1;Name=WP_000580316.1;gbkey=CDS;gene=potC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309527.1;locus_tag=AD08_RS15825;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580316.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 2498 3355 . - . ID=gene-AD08_RS15820;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=AD08_RS15820;old_locus_tag=AD08_1317 NZ_JHDJ01000139.1 Protein Homology CDS 2498 3355 . - 0 ID=cds-WP_000799401.1;Parent=gene-AD08_RS15820;Dbxref=Genbank:WP_000799401.1;Name=WP_000799401.1;gbkey=CDS;gene=potB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799378.1;locus_tag=AD08_RS15820;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799401.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 3339 4475 . - . ID=gene-AD08_RS15815;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=AD08_RS15815;old_locus_tag=AD08_1318 NZ_JHDJ01000139.1 Protein Homology CDS 3339 4475 . - 0 ID=cds-WP_032218473.1;Parent=gene-AD08_RS15815;Dbxref=Genbank:WP_032218473.1;Name=WP_032218473.1;gbkey=CDS;gene=potA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309598.1;locus_tag=AD08_RS15815;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_032218473.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 4725 5951 . + . ID=gene-AD08_RS15810;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=AD08_RS15810;old_locus_tag=AD08_1319 NZ_JHDJ01000139.1 Protein Homology CDS 4725 5951 . + 0 ID=cds-WP_000359434.1;Parent=gene-AD08_RS15810;Dbxref=Genbank:WP_000359434.1;Name=WP_000359434.1;gbkey=CDS;gene=pepT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415645.1;locus_tag=AD08_RS15810;product=peptidase T;protein_id=WP_000359434.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 6000 7121 . - . ID=gene-AD08_RS15805;Name=AD08_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15805;old_locus_tag=AD08_1320 NZ_JHDJ01000139.1 Protein Homology CDS 6000 7121 . - 0 ID=cds-WP_032218475.1;Parent=gene-AD08_RS15805;Dbxref=Genbank:WP_032218475.1;Name=WP_032218475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415646.4;locus_tag=AD08_RS15805;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_032218475.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 7197 8657 . - . ID=gene-AD08_RS15800;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=AD08_RS15800;old_locus_tag=AD08_1321 NZ_JHDJ01000139.1 Protein Homology CDS 7197 8657 . - 0 ID=cds-WP_000735412.1;Parent=gene-AD08_RS15800;Dbxref=Genbank:WP_000735412.1;Name=WP_000735412.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415647.1;locus_tag=AD08_RS15800;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_000735412.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 8657 9328 . - . ID=gene-AD08_RS15795;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=AD08_RS15795;old_locus_tag=AD08_1322 NZ_JHDJ01000139.1 Protein Homology CDS 8657 9328 . - 0 ID=cds-WP_001265471.1;Parent=gene-AD08_RS15795;Dbxref=Genbank:WP_001265471.1;Name=WP_001265471.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415648.1;locus_tag=AD08_RS15795;product=two-component system response regulator PhoP;protein_id=WP_001265471.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 9497 10867 . - . ID=gene-AD08_RS15790;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AD08_RS15790;old_locus_tag=AD08_1323 NZ_JHDJ01000139.1 Protein Homology CDS 9497 10867 . - 0 ID=cds-WP_000423742.1;Parent=gene-AD08_RS15790;Dbxref=Genbank:WP_000423742.1;Name=WP_000423742.1;gbkey=CDS;gene=purB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819529.1;locus_tag=AD08_RS15790;product=adenylosuccinate lyase;protein_id=WP_000423742.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 10871 11512 . - . ID=gene-AD08_RS15785;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=AD08_RS15785;old_locus_tag=AD08_1324 NZ_JHDJ01000139.1 Protein Homology CDS 10871 11512 . - 0 ID=cds-WP_001297479.1;Parent=gene-AD08_RS15785;Dbxref=Genbank:WP_001297479.1;Name=WP_001297479.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=AD08_RS15785;product=high frequency lysogenization protein HflD;protein_id=WP_001297479.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 11548 12654 . - . ID=gene-AD08_RS15780;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=AD08_RS15780;old_locus_tag=AD08_1325 NZ_JHDJ01000139.1 Protein Homology CDS 11548 12654 . - 0 ID=cds-WP_001297484.1;Parent=gene-AD08_RS15780;Dbxref=Genbank:WP_001297484.1;Name=WP_001297484.1;gbkey=CDS;gene=mnmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415651.4;locus_tag=AD08_RS15780;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_001297484.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 12708 13169 . - . ID=gene-AD08_RS15775;Name=nudJ;gbkey=Gene;gene=nudJ;gene_biotype=protein_coding;locus_tag=AD08_RS15775;old_locus_tag=AD08_1326 NZ_JHDJ01000139.1 Protein Homology CDS 12708 13169 . - 0 ID=cds-WP_000476093.1;Parent=gene-AD08_RS15775;Dbxref=Genbank:WP_000476093.1;Name=WP_000476093.1;gbkey=CDS;gene=nudJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309633.1;locus_tag=AD08_RS15775;product=phosphatase NudJ;protein_id=WP_000476093.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 13179 13832 . - . ID=gene-AD08_RS15770;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=AD08_RS15770;old_locus_tag=AD08_1327 NZ_JHDJ01000139.1 Protein Homology CDS 13179 13832 . - 0 ID=cds-WP_001248691.1;Parent=gene-AD08_RS15770;Dbxref=Genbank:WP_001248691.1;Name=WP_001248691.1;gbkey=CDS;gene=rluE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415653.4;locus_tag=AD08_RS15770;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001248691.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 14004 15254 . + . ID=gene-AD08_RS15765;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=AD08_RS15765;old_locus_tag=AD08_1328 NZ_JHDJ01000139.1 Protein Homology CDS 14004 15254 . + 0 ID=cds-WP_000444488.1;Parent=gene-AD08_RS15765;Dbxref=Genbank:WP_000444488.1;Name=WP_000444488.1;gbkey=CDS;gene=icd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=AD08_RS15765;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444488.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 15357 15680 . - . ID=gene-AD08_RS0125480;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=AD08_RS0125480 NZ_JHDJ01000139.1 Protein Homology CDS 15357 15680 . - 0 ID=cds-WP_001295666.1;Parent=gene-AD08_RS0125480;Dbxref=Genbank:WP_001295666.1;Name=WP_001295666.1;gbkey=CDS;gene=iraM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415678.1;locus_tag=AD08_RS0125480;product=anti-adapter protein IraM;protein_id=WP_001295666.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 16221 16331 . - . ID=gene-AD08_RS31630;Name=AD08_RS31630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31630 NZ_JHDJ01000139.1 Protein Homology CDS 16221 16331 . - 0 ID=cds-WP_032082692.1-2;Parent=gene-AD08_RS31630;Dbxref=Genbank:WP_032082692.1;Name=WP_032082692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518767.1;locus_tag=AD08_RS31630;product=hypothetical protein;protein_id=WP_032082692.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 16384 16788 . - . ID=gene-AD08_RS15760;Name=AD08_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15760;old_locus_tag=AD08_1329 NZ_JHDJ01000139.1 Protein Homology CDS 16384 16788 . - 0 ID=cds-WP_000373101.1-2;Parent=gene-AD08_RS15760;Dbxref=Genbank:WP_000373101.1;Name=WP_000373101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415679.1;locus_tag=AD08_RS15760;product=DUF1398 domain-containing protein;protein_id=WP_000373101.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 17009 17740 . - . ID=gene-AD08_RS15755;Name=AD08_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15755;old_locus_tag=AD08_1330 NZ_JHDJ01000139.1 Protein Homology CDS 17009 17740 . - 0 ID=cds-WP_000332303.1-2;Parent=gene-AD08_RS15755;Dbxref=Genbank:WP_000332303.1;Name=WP_000332303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415680.1;locus_tag=AD08_RS15755;product=DNA-binding transcriptional repressor BluR;protein_id=WP_000332303.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 17945 19156 . - . ID=gene-AD08_RS15750;Name=bluF;gbkey=Gene;gene=bluF;gene_biotype=protein_coding;locus_tag=AD08_RS15750;old_locus_tag=AD08_1331 NZ_JHDJ01000139.1 Protein Homology CDS 17945 19156 . - 0 ID=cds-WP_001299269.1;Parent=gene-AD08_RS15750;Dbxref=Genbank:WP_001299269.1;Name=WP_001299269.1;gbkey=CDS;gene=bluF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415681.1;locus_tag=AD08_RS15750;product=blue light-responsive regulator BluF;protein_id=WP_001299269.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 19470 19706 . + . ID=gene-AD08_RS0125490;Name=AD08_RS0125490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125490 NZ_JHDJ01000139.1 Protein Homology CDS 19470 19706 . + 0 ID=cds-WP_000554140.1;Parent=gene-AD08_RS0125490;Dbxref=Genbank:WP_000554140.1;Name=WP_000554140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415682.1;locus_tag=AD08_RS0125490;product=two-component-system connector protein YcgZ;protein_id=WP_000554140.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 19749 20021 . + . ID=gene-AD08_RS0125495;Name=AD08_RS0125495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125495 NZ_JHDJ01000139.1 Protein Homology CDS 19749 20021 . + 0 ID=cds-WP_000858002.1;Parent=gene-AD08_RS0125495;Dbxref=Genbank:WP_000858002.1;Name=WP_000858002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415683.1;locus_tag=AD08_RS0125495;product=two-component-system connector protein YmgA;protein_id=WP_000858002.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 20050 20316 . + . ID=gene-AD08_RS0125500;Name=ariR;gbkey=Gene;gene=ariR;gene_biotype=protein_coding;locus_tag=AD08_RS0125500 NZ_JHDJ01000139.1 Protein Homology CDS 20050 20316 . + 0 ID=cds-WP_000888772.1;Parent=gene-AD08_RS0125500;Dbxref=Genbank:WP_000888772.1;Name=WP_000888772.1;gbkey=CDS;gene=ariR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415684.1;locus_tag=AD08_RS0125500;product=biofilm/acid-resistance regulator AriR;protein_id=WP_000888772.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 20429 20677 . + . ID=gene-AD08_RS0125505;Name=AD08_RS0125505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125505 NZ_JHDJ01000139.1 Protein Homology CDS 20429 20677 . + 0 ID=cds-WP_001065752.1;Parent=gene-AD08_RS0125505;Dbxref=Genbank:WP_001065752.1;Name=WP_001065752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415685.1;locus_tag=AD08_RS0125505;product=hypothetical protein;protein_id=WP_001065752.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 21009 22532 . + . ID=gene-AD08_RS0125510;Name=AD08_RS0125510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125510 NZ_JHDJ01000139.1 Protein Homology CDS 21009 22532 . + 0 ID=cds-WP_032218479.1;Parent=gene-AD08_RS0125510;Dbxref=Genbank:WP_032218479.1;Name=WP_032218479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415686.2;locus_tag=AD08_RS0125510;product=cyclic diguanylate phosphodiesterase;protein_id=WP_032218479.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 22664 22882 . + . ID=gene-AD08_RS0125515;Name=AD08_RS0125515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125515 NZ_JHDJ01000139.1 Protein Homology CDS 22664 22882 . + 0 ID=cds-WP_001065861.1;Parent=gene-AD08_RS0125515;Dbxref=Genbank:WP_001065861.1;Name=WP_001065861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588447.1;locus_tag=AD08_RS0125515;product=hypothetical protein;protein_id=WP_001065861.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq pseudogene 23282 24801 . + . ID=gene-AD08_RS28535;Name=AD08_RS28535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS28535;pseudo=true NZ_JHDJ01000139.1 Protein Homology CDS 23282 24801 . + 0 ID=cds-AD08_RS28535;Parent=gene-AD08_RS28535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239293.1;locus_tag=AD08_RS28535;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 24814 25902 . + . ID=gene-AD08_RS28540;Name=AD08_RS28540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS28540;old_locus_tag=AD08_1339 NZ_JHDJ01000139.1 Protein Homology CDS 24814 25902 . + 0 ID=cds-WP_071524883.1;Parent=gene-AD08_RS28540;Dbxref=Genbank:WP_071524883.1;Name=WP_071524883.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=AD08_RS28540;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_071524883.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 25985 26320 . - . ID=gene-AD08_RS15725;Name=AD08_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15725;old_locus_tag=AD08_1340 NZ_JHDJ01000139.1 Protein Homology CDS 25985 26320 . - 0 ID=cds-WP_000979977.1;Parent=gene-AD08_RS15725;Dbxref=Genbank:WP_000979977.1;Name=WP_000979977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707068.1;locus_tag=AD08_RS15725;product=YmgD family protein;protein_id=WP_000979977.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 26324 26608 . - . ID=gene-AD08_RS15720;Name=AD08_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15720;old_locus_tag=AD08_1341 NZ_JHDJ01000139.1 Protein Homology CDS 26324 26608 . - 0 ID=cds-WP_001304448.1;Parent=gene-AD08_RS15720;Dbxref=Genbank:WP_001304448.1;Name=WP_001304448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707069.2;locus_tag=AD08_RS15720;product=glycine zipper family protein;protein_id=WP_001304448.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 26670 26843 . - . ID=gene-AD08_RS15715;Name=AD08_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15715;old_locus_tag=AD08_1342 NZ_JHDJ01000139.1 Protein Homology CDS 26670 26843 . - 0 ID=cds-WP_000122462.1;Parent=gene-AD08_RS15715;Dbxref=Genbank:WP_000122462.1;Name=WP_000122462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165314.1;locus_tag=AD08_RS15715;product=hypothetical protein;protein_id=WP_000122462.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 26944 27129 . + . ID=gene-AD08_RS28545;Name=AD08_RS28545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS28545 NZ_JHDJ01000139.1 Protein Homology CDS 26944 27129 . + 0 ID=cds-WP_001325005.1;Parent=gene-AD08_RS28545;Dbxref=Genbank:WP_001325005.1;Name=WP_001325005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165315.1;locus_tag=AD08_RS28545;product=hypothetical protein;protein_id=WP_001325005.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 27090 27209 . + . ID=gene-AD08_RS31635;Name=AD08_RS31635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31635;old_locus_tag=AD08_1343 NZ_JHDJ01000139.1 Protein Homology CDS 27090 27209 . + 0 ID=cds-WP_001131446.1;Parent=gene-AD08_RS31635;Dbxref=Genbank:WP_001131446.1;Name=WP_001131446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131457.1;locus_tag=AD08_RS31635;product=hypothetical protein;protein_id=WP_001131446.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq pseudogene 27244 27587 . + . ID=gene-AD08_RS0125520;Name=AD08_RS0125520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125520;partial=true;pseudo=true;start_range=.,27244 NZ_JHDJ01000139.1 Protein Homology CDS 27244 27587 . + 0 ID=cds-AD08_RS0125520;Parent=gene-AD08_RS0125520;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311542.2;locus_tag=AD08_RS0125520;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,27244;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 27959 28225 . - . ID=gene-AD08_RS15710;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=AD08_RS15710;old_locus_tag=AD08_1345 NZ_JHDJ01000139.1 Protein Homology CDS 27959 28225 . - 0 ID=cds-WP_001185665.1;Parent=gene-AD08_RS15710;Dbxref=Genbank:WP_001185665.1;Name=WP_001185665.1;gbkey=CDS;gene=minE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309695.1;locus_tag=AD08_RS15710;product=cell division topological specificity factor MinE;protein_id=WP_001185665.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 28229 29041 . - . ID=gene-AD08_RS15705;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=AD08_RS15705;old_locus_tag=AD08_1346 NZ_JHDJ01000139.1 Protein Homology CDS 28229 29041 . - 0 ID=cds-WP_000101055.1;Parent=gene-AD08_RS15705;Dbxref=Genbank:WP_000101055.1;Name=WP_000101055.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=AD08_RS15705;product=septum site-determining protein MinD;protein_id=WP_000101055.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 29065 29760 . - . ID=gene-AD08_RS15700;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=AD08_RS15700;old_locus_tag=AD08_1347 NZ_JHDJ01000139.1 Protein Homology CDS 29065 29760 . - 0 ID=cds-WP_001301105.1;Parent=gene-AD08_RS15700;Dbxref=Genbank:WP_001301105.1;Name=WP_001301105.1;gbkey=CDS;gene=minC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415694.1;locus_tag=AD08_RS15700;product=septum site-determining protein MinC;protein_id=WP_001301105.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 30280 30648 . + . ID=gene-AD08_RS15695;Name=AD08_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15695;old_locus_tag=AD08_1348 NZ_JHDJ01000139.1 Protein Homology CDS 30280 30648 . + 0 ID=cds-WP_001056840.1;Parent=gene-AD08_RS15695;Dbxref=Genbank:WP_001056840.1;Name=WP_001056840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415695.1;locus_tag=AD08_RS15695;product=hypothetical protein;protein_id=WP_001056840.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 30751 31152 . - . ID=gene-AD08_RS0125525;Name=AD08_RS0125525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125525 NZ_JHDJ01000139.1 Protein Homology CDS 30751 31152 . - 0 ID=cds-WP_000695215.1;Parent=gene-AD08_RS0125525;Dbxref=Genbank:WP_000695215.1;Name=WP_000695215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415696.1;locus_tag=AD08_RS0125525;product=inhibitor of g-type lysozyme;protein_id=WP_000695215.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 31394 31687 . + . ID=gene-AD08_RS15690;Name=AD08_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15690;old_locus_tag=AD08_1350 NZ_JHDJ01000139.1 Protein Homology CDS 31394 31687 . + 0 ID=cds-WP_001295992.1;Parent=gene-AD08_RS15690;Dbxref=Genbank:WP_001295992.1;Name=WP_001295992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=AD08_RS15690;product=hypothetical protein;protein_id=WP_001295992.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 31759 32418 . + . ID=gene-AD08_RS15685;Name=AD08_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15685;old_locus_tag=AD08_1351 NZ_JHDJ01000139.1 Protein Homology CDS 31759 32418 . + 0 ID=cds-WP_000284280.1;Parent=gene-AD08_RS15685;Dbxref=Genbank:WP_000284280.1;Name=WP_000284280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415698.1;locus_tag=AD08_RS15685;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000284280.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 32495 32956 . + . ID=gene-AD08_RS15680;Name=AD08_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15680;old_locus_tag=AD08_1352 NZ_JHDJ01000139.1 Protein Homology CDS 32495 32956 . + 0 ID=cds-WP_000807626.1;Parent=gene-AD08_RS15680;Dbxref=Genbank:WP_000807626.1;Name=WP_000807626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415699.5;locus_tag=AD08_RS15680;product=YcgN family cysteine cluster protein;protein_id=WP_000807626.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 33163 34074 . - . ID=gene-AD08_RS15675;Name=hlyE;gbkey=Gene;gene=hlyE;gene_biotype=protein_coding;locus_tag=AD08_RS15675;old_locus_tag=AD08_1353 NZ_JHDJ01000139.1 Protein Homology CDS 33163 34074 . - 0 ID=cds-WP_001336523.1;Parent=gene-AD08_RS15675;Dbxref=Genbank:WP_001336523.1;Name=WP_001336523.1;gbkey=CDS;gene=hlyE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415700.4;locus_tag=AD08_RS15675;product=hemolysin HlyE;protein_id=WP_001336523.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq gene 34447 34866 . + . ID=gene-AD08_RS15670;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=AD08_RS15670;old_locus_tag=AD08_1354 NZ_JHDJ01000139.1 Protein Homology CDS 34447 34866 . + 0 ID=cds-WP_000897378.1;Parent=gene-AD08_RS15670;Dbxref=Genbank:WP_000897378.1;Name=WP_000897378.1;gbkey=CDS;gene=umuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309705.1;locus_tag=AD08_RS15670;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000897378.1;transl_table=11 NZ_JHDJ01000139.1 RefSeq pseudogene 34866 34964 . + . ID=gene-AD08_RS28570;Name=AD08_RS28570;end_range=34964,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS28570;old_locus_tag=AD08_1355;partial=true;pseudo=true NZ_JHDJ01000139.1 Protein Homology CDS 34866 34964 . + 0 ID=cds-AD08_RS28570;Parent=gene-AD08_RS28570;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=34964,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415702.1;locus_tag=AD08_RS28570;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDJ01000139.1 RefSeq pseudogene 35422 35792 . - . ID=gene-AD08_RS15665;Name=AD08_RS15665;end_range=35792,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS15665;old_locus_tag=AD08_1356;partial=true;pseudo=true NZ_JHDJ01000139.1 Protein Homology CDS 35422 35792 . - 2 ID=cds-AD08_RS15665;Parent=gene-AD08_RS15665;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=35792,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS15665;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000140.1 1 19072 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000140.1 RefSeq region 1 19072 . + . ID=NZ_JHDJ01000140.1:1..19072;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000140.1 RefSeq pseudogene 1 404 . - . ID=gene-AD08_RS28580;Name=AD08_RS28580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS28580;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000140.1 Protein Homology CDS 1 404 . - 0 ID=cds-AD08_RS28580;Parent=gene-AD08_RS28580;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS28580;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000140.1 RefSeq gene 474 635 . + . ID=gene-AD08_RS31640;Name=AD08_RS31640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31640;old_locus_tag=AD08_1358 NZ_JHDJ01000140.1 GeneMarkS-2+ CDS 474 635 . + 0 ID=cds-WP_001459669.1;Parent=gene-AD08_RS31640;Dbxref=Genbank:WP_001459669.1;Name=WP_001459669.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS31640;product=hypothetical protein;protein_id=WP_001459669.1;transl_table=11 NZ_JHDJ01000140.1 RefSeq gene 891 1850 . - . ID=gene-AD08_RS15655;Name=AD08_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15655;old_locus_tag=AD08_1359 NZ_JHDJ01000140.1 Protein Homology CDS 891 1850 . - 0 ID=cds-WP_032218484.1;Parent=gene-AD08_RS15655;Dbxref=Genbank:WP_032218484.1;Name=WP_032218484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243128.1;locus_tag=AD08_RS15655;product=hypothetical protein;protein_id=WP_032218484.1;transl_table=11 NZ_JHDJ01000140.1 RefSeq gene 1852 2952 . - . ID=gene-AD08_RS15650;Name=AD08_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15650;old_locus_tag=AD08_1360 NZ_JHDJ01000140.1 Protein Homology CDS 1852 2952 . - 0 ID=cds-WP_031619804.1;Parent=gene-AD08_RS15650;Dbxref=Genbank:WP_031619804.1;Name=WP_031619804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005303816.1;locus_tag=AD08_RS15650;product=DUF4935 domain-containing protein;protein_id=WP_031619804.1;transl_table=11 NZ_JHDJ01000140.1 RefSeq gene 3388 4476 . + . ID=gene-AD08_RS15645;Name=AD08_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15645;old_locus_tag=AD08_1361 NZ_JHDJ01000140.1 Protein Homology CDS 3388 4476 . + 0 ID=cds-WP_001459672.1;Parent=gene-AD08_RS15645;Dbxref=Genbank:WP_001459672.1;Name=WP_001459672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016791210.1;locus_tag=AD08_RS15645;product=hypothetical protein;protein_id=WP_001459672.1;transl_table=11 NZ_JHDJ01000140.1 RefSeq gene 4882 6060 . + . ID=gene-AD08_RS15640;Name=AD08_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15640;old_locus_tag=AD08_1362 NZ_JHDJ01000140.1 Protein Homology CDS 4882 6060 . + 0 ID=cds-WP_071995821.1;Parent=gene-AD08_RS15640;Dbxref=Genbank:WP_071995821.1;Name=WP_071995821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005115279.1;locus_tag=AD08_RS15640;product=DNA polymerase V catalytic protein;protein_id=WP_071995821.1;transl_table=11 NZ_JHDJ01000140.1 RefSeq gene 6106 6636 . - . ID=gene-AD08_RS15635;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=AD08_RS15635;old_locus_tag=AD08_1363 NZ_JHDJ01000140.1 Protein Homology CDS 6106 6636 . - 0 ID=cds-WP_000943459.1;Parent=gene-AD08_RS15635;Dbxref=Genbank:WP_000943459.1;Name=WP_000943459.1;gbkey=CDS;gene=dsbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309707.1;locus_tag=AD08_RS15635;product=disulfide bond formation protein DsbB;protein_id=WP_000943459.1;transl_table=11 NZ_JHDJ01000140.1 RefSeq gene 6782 8323 . - . ID=gene-AD08_RS15630;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=AD08_RS15630;old_locus_tag=AD08_1364 NZ_JHDJ01000140.1 Protein Homology CDS 6782 8323 . - 0 ID=cds-WP_000406391.1;Parent=gene-AD08_RS15630;Dbxref=Genbank:WP_000406391.1;Name=WP_000406391.1;gbkey=CDS;gene=nhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309708.1;locus_tag=AD08_RS15630;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406391.1;transl_table=11 NZ_JHDJ01000140.1 RefSeq gene 8544 9263 . + . ID=gene-AD08_RS15625;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=AD08_RS15625;old_locus_tag=AD08_1365 NZ_JHDJ01000140.1 Protein Homology CDS 8544 9263 . + 0 ID=cds-WP_000234823.1;Parent=gene-AD08_RS15625;Dbxref=Genbank:WP_000234823.1;Name=WP_000234823.1;gbkey=CDS;gene=fadR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309709.1;locus_tag=AD08_RS15625;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234823.1;transl_table=11 NZ_JHDJ01000140.1 RefSeq gene 9315 10847 . - . ID=gene-AD08_RS15620;Name=AD08_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15620;old_locus_tag=AD08_1366 NZ_JHDJ01000140.1 Protein Homology CDS 9315 10847 . - 0 ID=cds-WP_000190854.1;Parent=gene-AD08_RS15620;Dbxref=Genbank:WP_000190854.1;Name=WP_000190854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415706.1;locus_tag=AD08_RS15620;product=SpoVR family protein;protein_id=WP_000190854.1;transl_table=11 NZ_JHDJ01000140.1 RefSeq gene 11177 12475 . + . ID=gene-AD08_RS15615;Name=AD08_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15615;old_locus_tag=AD08_1367 NZ_JHDJ01000140.1 Protein Homology CDS 11177 12475 . + 0 ID=cds-WP_001505949.1;Parent=gene-AD08_RS15615;Dbxref=Genbank:WP_001505949.1;Name=WP_001505949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309711.1;locus_tag=AD08_RS15615;product=D-amino acid dehydrogenase;protein_id=WP_001505949.1;transl_table=11 NZ_JHDJ01000140.1 RefSeq gene 12485 13555 . + . ID=gene-AD08_RS15610;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=AD08_RS15610;old_locus_tag=AD08_1368 NZ_JHDJ01000140.1 Protein Homology CDS 12485 13555 . + 0 ID=cds-WP_000197881.1;Parent=gene-AD08_RS15610;Dbxref=Genbank:WP_000197881.1;Name=WP_000197881.1;gbkey=CDS;gene=dadX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415708.1;locus_tag=AD08_RS15610;product=catabolic alanine racemase DadX;protein_id=WP_000197881.1;transl_table=11 NZ_JHDJ01000140.1 RefSeq gene 13941 15677 . - . ID=gene-AD08_RS15605;Name=AD08_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15605;old_locus_tag=AD08_1370 NZ_JHDJ01000140.1 Protein Homology CDS 13941 15677 . - 0 ID=cds-WP_000340194.1;Parent=gene-AD08_RS15605;Dbxref=Genbank:WP_000340194.1;Name=WP_000340194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415709.2;locus_tag=AD08_RS15605;product=potassium/proton antiporter;protein_id=WP_000340194.1;transl_table=11 NZ_JHDJ01000140.1 RefSeq gene 15772 16686 . - . ID=gene-AD08_RS15600;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=AD08_RS15600;old_locus_tag=AD08_1371 NZ_JHDJ01000140.1 Protein Homology CDS 15772 16686 . - 0 ID=cds-WP_000051560.1;Parent=gene-AD08_RS15600;Dbxref=Genbank:WP_000051560.1;Name=WP_000051560.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415710.1;locus_tag=AD08_RS15600;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_000051560.1;transl_table=11 NZ_JHDJ01000140.1 RefSeq gene 16786 17397 . + . ID=gene-AD08_RS15595;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=AD08_RS15595;old_locus_tag=AD08_1372 NZ_JHDJ01000140.1 Protein Homology CDS 16786 17397 . + 0 ID=cds-WP_001397116.1;Parent=gene-AD08_RS15595;Dbxref=Genbank:WP_001397116.1;Name=WP_001397116.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415711.2;locus_tag=AD08_RS15595;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_001397116.1;transl_table=11 NZ_JHDJ01000140.1 RefSeq gene 17399 18133 . - . ID=gene-AD08_RS15590;Name=AD08_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15590;old_locus_tag=AD08_1373 NZ_JHDJ01000140.1 Protein Homology CDS 17399 18133 . - 0 ID=cds-WP_001508587.1;Parent=gene-AD08_RS15590;Dbxref=Genbank:WP_001508587.1;Name=WP_001508587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415712.1;locus_tag=AD08_RS15590;product=flagellar brake protein;protein_id=WP_001508587.1;transl_table=11 NZ_JHDJ01000140.1 RefSeq gene 18334 18588 . + . ID=gene-AD08_RS15585;Name=AD08_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15585;old_locus_tag=AD08_1374 NZ_JHDJ01000140.1 Protein Homology CDS 18334 18588 . + 0 ID=cds-WP_032218489.1;Parent=gene-AD08_RS15585;Dbxref=Genbank:WP_032218489.1;Name=WP_032218489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415713.1;locus_tag=AD08_RS15585;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_032218489.1;transl_table=11 NZ_JHDJ01000140.1 RefSeq pseudogene 18710 19072 . - . ID=gene-AD08_RS15580;Name=AD08_RS15580;end_range=19072,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS15580;old_locus_tag=AD08_1375;partial=true;pseudo=true NZ_JHDJ01000140.1 Protein Homology CDS 18710 19072 . - 0 ID=cds-AD08_RS15580;Parent=gene-AD08_RS15580;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=19072,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS15580;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000141.1 1 85189 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000141.1 RefSeq region 1 85189 . + . ID=NZ_JHDJ01000141.1:1..85189;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000141.1 RefSeq pseudogene 1 374 . - . ID=gene-AD08_RS28595;Name=AD08_RS28595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS28595;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000141.1 Protein Homology CDS 1 374 . - 0 ID=cds-AD08_RS28595;Parent=gene-AD08_RS28595;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS28595;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 699 950 . + . ID=gene-AD08_RS15570;Name=AD08_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15570;old_locus_tag=AD08_1377 NZ_JHDJ01000141.1 Protein Homology CDS 699 950 . + 0 ID=cds-WP_000935085.1;Parent=gene-AD08_RS15570;Dbxref=Genbank:WP_000935085.1;Name=WP_000935085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000935085.1;locus_tag=AD08_RS15570;product=hypothetical protein;protein_id=WP_000935085.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 1029 2726 . - . ID=gene-AD08_RS15565;Name=AD08_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15565;old_locus_tag=AD08_1378 NZ_JHDJ01000141.1 Protein Homology CDS 1029 2726 . - 0 ID=cds-WP_000841714.1;Parent=gene-AD08_RS15565;Dbxref=Genbank:WP_000841714.1;Name=WP_000841714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415715.1;locus_tag=AD08_RS15565;product=alpha%2Calpha-trehalase;protein_id=WP_000841714.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 3046 4464 . - . ID=gene-AD08_RS15560;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=AD08_RS15560;old_locus_tag=AD08_1379 NZ_JHDJ01000141.1 Protein Homology CDS 3046 4464 . - 0 ID=cds-WP_001301101.1;Parent=gene-AD08_RS15560;Dbxref=Genbank:WP_001301101.1;Name=WP_001301101.1;gbkey=CDS;gene=dhaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415716.4;locus_tag=AD08_RS15560;product=dihydroxyacetone kinase subunit DhaM;protein_id=WP_001301101.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 4475 5107 . - . ID=gene-AD08_RS15555;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=AD08_RS15555;old_locus_tag=AD08_1380 NZ_JHDJ01000141.1 Protein Homology CDS 4475 5107 . - 0 ID=cds-WP_000059411.1;Parent=gene-AD08_RS15555;Dbxref=Genbank:WP_000059411.1;Name=WP_000059411.1;gbkey=CDS;gene=dhaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415717.1;locus_tag=AD08_RS15555;product=dihydroxyacetone kinase ADP-binding subunit DhaL;protein_id=WP_000059411.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 5118 6188 . - . ID=gene-AD08_RS15550;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=AD08_RS15550;old_locus_tag=AD08_1381 NZ_JHDJ01000141.1 Protein Homology CDS 5118 6188 . - 0 ID=cds-WP_000733715.1;Parent=gene-AD08_RS15550;Dbxref=Genbank:WP_000733715.1;Name=WP_000733715.1;gbkey=CDS;gene=dhaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415718.6;locus_tag=AD08_RS15550;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_000733715.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 6407 8335 . + . ID=gene-AD08_RS15545;Name=dhaR;gbkey=Gene;gene=dhaR;gene_biotype=protein_coding;locus_tag=AD08_RS15545;old_locus_tag=AD08_1382 NZ_JHDJ01000141.1 Protein Homology CDS 6407 8335 . + 0 ID=cds-WP_001205410.1;Parent=gene-AD08_RS15545;Dbxref=Genbank:WP_001205410.1;Name=WP_001205410.1;gbkey=CDS;gene=dhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707110.1;locus_tag=AD08_RS15545;product=PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR;protein_id=WP_001205410.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 8435 11302 . - . ID=gene-AD08_RS15540;Name=AD08_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15540;old_locus_tag=AD08_1383 NZ_JHDJ01000141.1 Protein Homology CDS 8435 11302 . - 0 ID=cds-WP_001334788.1;Parent=gene-AD08_RS15540;Dbxref=Genbank:WP_001334788.1;Name=WP_001334788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415720.1;locus_tag=AD08_RS15540;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_001334788.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 12071 13162 . - . ID=gene-AD08_RS15530;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AD08_RS15530;old_locus_tag=AD08_1385 NZ_JHDJ01000141.1 Protein Homology CDS 12071 13162 . - 0 ID=cds-WP_000505866.1;Parent=gene-AD08_RS15530;Dbxref=Genbank:WP_000505866.1;Name=WP_000505866.1;gbkey=CDS;gene=ychF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=AD08_RS15530;product=redox-regulated ATPase YchF;protein_id=WP_000505866.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 13279 13863 . - . ID=gene-AD08_RS15525;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=AD08_RS15525;old_locus_tag=AD08_1386 NZ_JHDJ01000141.1 Protein Homology CDS 13279 13863 . - 0 ID=cds-WP_000152933.1;Parent=gene-AD08_RS15525;Dbxref=Genbank:WP_000152933.1;Name=WP_000152933.1;gbkey=CDS;gene=pth;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309736.1;locus_tag=AD08_RS15525;product=aminoacyl-tRNA hydrolase;protein_id=WP_000152933.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 14141 14419 . + . ID=gene-AD08_RS15520;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=AD08_RS15520;old_locus_tag=AD08_1387 NZ_JHDJ01000141.1 Protein Homology CDS 14141 14419 . + 0 ID=cds-WP_000823885.1;Parent=gene-AD08_RS15520;Dbxref=Genbank:WP_000823885.1;Name=WP_000823885.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309737.1;locus_tag=AD08_RS15520;product=stress-induced protein YchH;protein_id=WP_000823885.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 14474 16153 . - . ID=gene-AD08_RS15515;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=AD08_RS15515;old_locus_tag=AD08_1388 NZ_JHDJ01000141.1 Protein Homology CDS 14474 16153 . - 0 ID=cds-WP_001033352.1;Parent=gene-AD08_RS15515;Dbxref=Genbank:WP_001033352.1;Name=WP_001033352.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415724.2;locus_tag=AD08_RS15515;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001033352.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 16278 17225 . - . ID=gene-AD08_RS15510;Name=AD08_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15510;old_locus_tag=AD08_1389 NZ_JHDJ01000141.1 Protein Homology CDS 16278 17225 . - 0 ID=cds-WP_001298109.1;Parent=gene-AD08_RS15510;Dbxref=Genbank:WP_001298109.1;Name=WP_001298109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=AD08_RS15510;product=ribose-phosphate diphosphokinase;protein_id=WP_001298109.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 17376 18227 . - . ID=gene-AD08_RS15505;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=AD08_RS15505;old_locus_tag=AD08_1390 NZ_JHDJ01000141.1 Protein Homology CDS 17376 18227 . - 0 ID=cds-WP_001260332.1;Parent=gene-AD08_RS15505;Dbxref=Genbank:WP_001260332.1;Name=WP_001260332.1;gbkey=CDS;gene=ispE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309740.1;locus_tag=AD08_RS15505;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_001260332.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 18227 18850 . - . ID=gene-AD08_RS15500;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=AD08_RS15500;old_locus_tag=AD08_1391 NZ_JHDJ01000141.1 Protein Homology CDS 18227 18850 . - 0 ID=cds-WP_001130692.1;Parent=gene-AD08_RS15500;Dbxref=Genbank:WP_001130692.1;Name=WP_001130692.1;gbkey=CDS;gene=lolB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309741.1;locus_tag=AD08_RS15500;product=lipoprotein localization protein LolB;protein_id=WP_001130692.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 19064 20320 . + . ID=gene-AD08_RS15495;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=AD08_RS15495;old_locus_tag=AD08_1392 NZ_JHDJ01000141.1 Protein Homology CDS 19064 20320 . + 0 ID=cds-WP_001299679.1;Parent=gene-AD08_RS15495;Dbxref=Genbank:WP_001299679.1;Name=WP_001299679.1;gbkey=CDS;gene=hemA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309742.1;locus_tag=AD08_RS15495;product=glutamyl-tRNA reductase;protein_id=WP_001299679.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 20362 21444 . + . ID=gene-AD08_RS15490;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AD08_RS15490;old_locus_tag=AD08_1393 NZ_JHDJ01000141.1 Protein Homology CDS 20362 21444 . + 0 ID=cds-WP_000804726.1;Parent=gene-AD08_RS15490;Dbxref=Genbank:WP_000804726.1;Name=WP_000804726.1;gbkey=CDS;gene=prfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=AD08_RS15490;product=peptide chain release factor 1;protein_id=WP_000804726.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 21444 22277 . + . ID=gene-AD08_RS15485;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=AD08_RS15485;old_locus_tag=AD08_1394 NZ_JHDJ01000141.1 Protein Homology CDS 21444 22277 . + 0 ID=cds-WP_001471471.1;Parent=gene-AD08_RS15485;Dbxref=Genbank:WP_001471471.1;Name=WP_001471471.1;gbkey=CDS;gene=prmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415730.1;locus_tag=AD08_RS15485;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_001471471.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 22274 22666 . + . ID=gene-AD08_RS15480;Name=AD08_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15480;old_locus_tag=AD08_1395 NZ_JHDJ01000141.1 Protein Homology CDS 22274 22666 . + 0 ID=cds-WP_000200374.1;Parent=gene-AD08_RS15480;Dbxref=Genbank:WP_000200374.1;Name=WP_000200374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415731.1;locus_tag=AD08_RS15480;product=SirB family protein;protein_id=WP_000200374.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 22670 23479 . + . ID=gene-AD08_RS15475;Name=AD08_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15475;old_locus_tag=AD08_1396 NZ_JHDJ01000141.1 Protein Homology CDS 22670 23479 . + 0 ID=cds-WP_001373234.1;Parent=gene-AD08_RS15475;Dbxref=Genbank:WP_001373234.1;Name=WP_001373234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309746.1;locus_tag=AD08_RS15475;product=tetratricopeptide repeat-containing protein;protein_id=WP_001373234.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 23515 24369 . + . ID=gene-AD08_RS15470;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=AD08_RS15470;old_locus_tag=AD08_1397 NZ_JHDJ01000141.1 Protein Homology CDS 23515 24369 . + 0 ID=cds-WP_000811065.1;Parent=gene-AD08_RS15470;Dbxref=Genbank:WP_000811065.1;Name=WP_000811065.1;gbkey=CDS;gene=kdsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126202.1;locus_tag=AD08_RS15470;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811065.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 24518 24625 . - . ID=gene-AD08_RS15465;Name=AD08_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15465;old_locus_tag=AD08_1398 NZ_JHDJ01000141.1 Protein Homology CDS 24518 24625 . - 0 ID=cds-WP_000170955.1;Parent=gene-AD08_RS15465;Dbxref=Genbank:WP_000170955.1;Name=WP_000170955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025297.1;locus_tag=AD08_RS15465;product=small toxic polypeptide LdrA/LdrC;protein_id=WP_000170955.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 25053 25160 . - . ID=gene-AD08_RS15460;Name=AD08_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15460;old_locus_tag=AD08_1399 NZ_JHDJ01000141.1 Protein Homology CDS 25053 25160 . - 0 ID=cds-WP_000170963.1;Parent=gene-AD08_RS15460;Dbxref=Genbank:WP_000170963.1;Name=WP_000170963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025298.1;locus_tag=AD08_RS15460;product=small toxic polypeptide LdrB;protein_id=WP_000170963.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 25588 25695 . - . ID=gene-AD08_RS15455;Name=AD08_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15455;old_locus_tag=AD08_1400 NZ_JHDJ01000141.1 Protein Homology CDS 25588 25695 . - 0 ID=cds-WP_000170955.1-2;Parent=gene-AD08_RS15455;Dbxref=Genbank:WP_000170955.1;Name=WP_000170955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025297.1;locus_tag=AD08_RS15455;product=small toxic polypeptide LdrA/LdrC;protein_id=WP_000170955.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq pseudogene 26099 27199 . - . ID=gene-AD08_RS15450;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=pseudogene;locus_tag=AD08_RS15450;old_locus_tag=AD08_1401;pseudo=true NZ_JHDJ01000141.1 Protein Homology CDS 26099 27199 . - 0 ID=cds-AD08_RS15450;Parent=gene-AD08_RS15450;Note=internal stop;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415734.1;locus_tag=AD08_RS15450;product=sodium-potassium/proton antiporter ChaA;pseudo=true;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 27469 27699 . + . ID=gene-AD08_RS15445;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=AD08_RS15445;old_locus_tag=AD08_1402 NZ_JHDJ01000141.1 Protein Homology CDS 27469 27699 . + 0 ID=cds-WP_001146444.1;Parent=gene-AD08_RS15445;Dbxref=Genbank:WP_001146444.1;Name=WP_001146444.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309749.1;locus_tag=AD08_RS15445;product=putative cation transport regulator ChaB;protein_id=WP_001146444.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 27857 28552 . + . ID=gene-AD08_RS15440;Name=AD08_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15440;old_locus_tag=AD08_1403 NZ_JHDJ01000141.1 Protein Homology CDS 27857 28552 . + 0 ID=cds-WP_001336325.1;Parent=gene-AD08_RS15440;Dbxref=Genbank:WP_001336325.1;Name=WP_001336325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415736.2;locus_tag=AD08_RS15440;product=glutathione-specific gamma-glutamylcyclotransferase;protein_id=WP_001336325.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 28596 28949 . - . ID=gene-AD08_RS15435;Name=ychN;gbkey=Gene;gene=ychN;gene_biotype=protein_coding;locus_tag=AD08_RS15435;old_locus_tag=AD08_1404 NZ_JHDJ01000141.1 Protein Homology CDS 28596 28949 . - 0 ID=cds-WP_001169669.1;Parent=gene-AD08_RS15435;Dbxref=Genbank:WP_001169669.1;Name=WP_001169669.1;gbkey=CDS;gene=ychN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309751.1;locus_tag=AD08_RS15435;product=DsrE/F sulfur relay family protein YchN;protein_id=WP_001169669.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 29134 30528 . + . ID=gene-AD08_RS15430;Name=ychO;gbkey=Gene;gene=ychO;gene_biotype=protein_coding;locus_tag=AD08_RS15430;old_locus_tag=AD08_1405 NZ_JHDJ01000141.1 Protein Homology CDS 29134 30528 . + 0 ID=cds-WP_000086217.1;Parent=gene-AD08_RS15430;Dbxref=Genbank:WP_000086217.1;Name=WP_000086217.1;gbkey=CDS;gene=ychO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415738.2;locus_tag=AD08_RS15430;product=inverse autotransporter invasin YchO;protein_id=WP_000086217.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 30529 31179 . - . ID=gene-AD08_RS15425;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=AD08_RS15425;old_locus_tag=AD08_1406 NZ_JHDJ01000141.1 Protein Homology CDS 30529 31179 . - 0 ID=cds-WP_000070491.1;Parent=gene-AD08_RS15425;Dbxref=Genbank:WP_000070491.1;Name=WP_000070491.1;gbkey=CDS;gene=narL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309753.1;locus_tag=AD08_RS15425;product=two-component system response regulator NarL;protein_id=WP_000070491.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 31172 32968 . - . ID=gene-AD08_RS15420;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=AD08_RS15420;old_locus_tag=AD08_1407 NZ_JHDJ01000141.1 Protein Homology CDS 31172 32968 . - 0 ID=cds-WP_000918073.1;Parent=gene-AD08_RS15420;Dbxref=Genbank:WP_000918073.1;Name=WP_000918073.1;gbkey=CDS;gene=narX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309754.1;locus_tag=AD08_RS15420;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000918073.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 33307 34698 . + . ID=gene-AD08_RS15410;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=AD08_RS15410;old_locus_tag=AD08_1409 NZ_JHDJ01000141.1 Protein Homology CDS 33307 34698 . + 0 ID=cds-WP_000019827.1;Parent=gene-AD08_RS15410;Dbxref=Genbank:WP_000019827.1;Name=WP_000019827.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415741.1;locus_tag=AD08_RS15410;product=nitrate transporter NarK;protein_id=WP_000019827.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 35214 38957 . + . ID=gene-AD08_RS15405;Name=AD08_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15405;old_locus_tag=AD08_1410 NZ_JHDJ01000141.1 Protein Homology CDS 35214 38957 . + 0 ID=cds-WP_001723402.1;Parent=gene-AD08_RS15405;Dbxref=Genbank:WP_001723402.1;Name=WP_001723402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415742.1;locus_tag=AD08_RS15405;product=nitrate reductase subunit alpha;protein_id=WP_001723402.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 38954 40492 . + . ID=gene-AD08_RS15400;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AD08_RS15400;old_locus_tag=AD08_1411 NZ_JHDJ01000141.1 Protein Homology CDS 38954 40492 . + 0 ID=cds-WP_000702650.1;Parent=gene-AD08_RS15400;Dbxref=Genbank:WP_000702650.1;Name=WP_000702650.1;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415743.1;locus_tag=AD08_RS15400;product=nitrate reductase subunit beta;protein_id=WP_000702650.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 40489 41199 . + . ID=gene-AD08_RS15395;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=AD08_RS15395;old_locus_tag=AD08_1412 NZ_JHDJ01000141.1 Protein Homology CDS 40489 41199 . + 0 ID=cds-WP_000571681.1;Parent=gene-AD08_RS15395;Dbxref=Genbank:WP_000571681.1;Name=WP_000571681.1;gbkey=CDS;gene=narJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309758.1;locus_tag=AD08_RS15395;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571681.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 41199 41876 . + . ID=gene-AD08_RS15390;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AD08_RS15390;old_locus_tag=AD08_1413 NZ_JHDJ01000141.1 Protein Homology CDS 41199 41876 . + 0 ID=cds-WP_001160110.1;Parent=gene-AD08_RS15390;Dbxref=Genbank:WP_001160110.1;Name=WP_001160110.1;gbkey=CDS;gene=narI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309759.1;locus_tag=AD08_RS15390;product=respiratory nitrate reductase subunit gamma;protein_id=WP_001160110.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 42060 42191 . - . ID=gene-AD08_RS27355;Name=AD08_RS27355;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD08_RS27355 NZ_JHDJ01000141.1 cmsearch ncRNA 42060 42191 . - . ID=rna-AD08_RS27355;Parent=gene-AD08_RS27355;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27355;product=RtT sRNA NZ_JHDJ01000141.1 cmsearch exon 42060 42191 . - . ID=exon-AD08_RS27355-1;Parent=rna-AD08_RS27355;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27355;product=RtT sRNA NZ_JHDJ01000141.1 RefSeq gene 42238 42322 . - . ID=gene-AD08_RS15385;Name=AD08_RS15385;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS15385;old_locus_tag=AD08_1414 NZ_JHDJ01000141.1 tRNAscan-SE tRNA 42238 42322 . - . ID=rna-AD08_RS15385;Parent=gene-AD08_RS15385;anticodon=(pos:complement(42286..42288));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS15385;product=tRNA-Tyr NZ_JHDJ01000141.1 tRNAscan-SE exon 42238 42322 . - . ID=exon-AD08_RS15385-1;Parent=rna-AD08_RS15385;anticodon=(pos:complement(42286..42288));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS15385;product=tRNA-Tyr NZ_JHDJ01000141.1 RefSeq gene 42357 42488 . - . ID=gene-AD08_RS27360;Name=AD08_RS27360;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD08_RS27360 NZ_JHDJ01000141.1 cmsearch ncRNA 42357 42488 . - . ID=rna-AD08_RS27360;Parent=gene-AD08_RS27360;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27360;product=RtT sRNA NZ_JHDJ01000141.1 cmsearch exon 42357 42488 . - . ID=exon-AD08_RS27360-1;Parent=rna-AD08_RS27360;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27360;product=RtT sRNA NZ_JHDJ01000141.1 RefSeq gene 42532 42616 . - . ID=gene-AD08_RS15380;Name=AD08_RS15380;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS15380;old_locus_tag=AD08_1415 NZ_JHDJ01000141.1 tRNAscan-SE tRNA 42532 42616 . - . ID=rna-AD08_RS15380;Parent=gene-AD08_RS15380;anticodon=(pos:complement(42580..42582));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS15380;product=tRNA-Tyr NZ_JHDJ01000141.1 tRNAscan-SE exon 42532 42616 . - . ID=exon-AD08_RS15380-1;Parent=rna-AD08_RS15380;anticodon=(pos:complement(42580..42582));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS15380;product=tRNA-Tyr NZ_JHDJ01000141.1 RefSeq gene 42776 43618 . - . ID=gene-AD08_RS15375;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AD08_RS15375;old_locus_tag=AD08_1416 NZ_JHDJ01000141.1 Protein Homology CDS 42776 43618 . - 0 ID=cds-WP_000555857.1-2;Parent=gene-AD08_RS15375;Dbxref=Genbank:WP_000555857.1;Name=WP_000555857.1;gbkey=CDS;gene=purU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784958.1;locus_tag=AD08_RS15375;product=formyltetrahydrofolate deformylase;protein_id=WP_000555857.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 43668 44126 . - . ID=gene-AD08_RS0125535;Name=AD08_RS0125535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125535 NZ_JHDJ01000141.1 Protein Homology CDS 43668 44126 . - 0 ID=cds-WP_001307143.1;Parent=gene-AD08_RS0125535;Dbxref=Genbank:WP_001307143.1;Name=WP_001307143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415749.1;locus_tag=AD08_RS0125535;product=YchJ family protein;protein_id=WP_001307143.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 44239 45144 . + . ID=gene-AD08_RS15370;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=AD08_RS15370;old_locus_tag=AD08_1418 NZ_JHDJ01000141.1 Protein Homology CDS 44239 45144 . + 0 ID=cds-WP_001295622.1;Parent=gene-AD08_RS15370;Dbxref=Genbank:WP_001295622.1;Name=WP_001295622.1;gbkey=CDS;gene=rssA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707140.2;locus_tag=AD08_RS15370;product=patatin-like phospholipase RssA;protein_id=WP_001295622.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 45236 46249 . + . ID=gene-AD08_RS15365;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=AD08_RS15365;old_locus_tag=AD08_1419 NZ_JHDJ01000141.1 Protein Homology CDS 45236 46249 . + 0 ID=cds-WP_001390147.1;Parent=gene-AD08_RS15365;Dbxref=Genbank:WP_001390147.1;Name=WP_001390147.1;gbkey=CDS;gene=rssB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309764.1;locus_tag=AD08_RS15365;product=two-component system response regulator RssB;protein_id=WP_001390147.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 46451 47359 . + . ID=gene-AD08_RS15360;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=AD08_RS15360;old_locus_tag=AD08_1420 NZ_JHDJ01000141.1 Protein Homology CDS 46451 47359 . + 0 ID=cds-WP_000718995.1;Parent=gene-AD08_RS15360;Dbxref=Genbank:WP_000718995.1;Name=WP_000718995.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309765.1;locus_tag=AD08_RS15360;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000718995.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 47503 47916 . - . ID=gene-AD08_RS15355;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=AD08_RS15355;old_locus_tag=AD08_1421 NZ_JHDJ01000141.1 Protein Homology CDS 47503 47916 . - 0 ID=cds-WP_001287378.1;Parent=gene-AD08_RS15355;Dbxref=Genbank:WP_001287378.1;Name=WP_001287378.1;gbkey=CDS;gene=hns;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309766.1;locus_tag=AD08_RS15355;product=DNA-binding transcriptional regulator H-NS;protein_id=WP_001287378.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 48521 49138 . + . ID=gene-AD08_RS15350;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=AD08_RS15350;old_locus_tag=AD08_1422 NZ_JHDJ01000141.1 Protein Homology CDS 48521 49138 . + 0 ID=cds-WP_000068077.1;Parent=gene-AD08_RS15350;Dbxref=Genbank:WP_000068077.1;Name=WP_000068077.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415754.1;locus_tag=AD08_RS15350;product=thymidine kinase;protein_id=WP_000068077.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq pseudogene 49420 50316 . - . ID=gene-AD08_RS15345;Name=AD08_RS15345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS15345;old_locus_tag=AD08_1423;pseudo=true NZ_JHDJ01000141.1 Protein Homology CDS 49420 50316 . - 0 ID=cds-AD08_RS15345;Parent=gene-AD08_RS15345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=AD08_RS15345;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 50440 53115 . - . ID=gene-AD08_RS15340;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=AD08_RS15340;old_locus_tag=AD08_1426 NZ_JHDJ01000141.1 Protein Homology CDS 50440 53115 . - 0 ID=cds-WP_000301651.1;Parent=gene-AD08_RS15340;Dbxref=Genbank:WP_000301651.1;Name=WP_000301651.1;gbkey=CDS;gene=adhE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309768.1;locus_tag=AD08_RS15340;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301651.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 53592 54239 . + . ID=gene-AD08_RS15335;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=AD08_RS15335;old_locus_tag=AD08_1427 NZ_JHDJ01000141.1 Protein Homology CDS 53592 54239 . + 0 ID=cds-WP_001614504.1;Parent=gene-AD08_RS15335;Dbxref=Genbank:WP_001614504.1;Name=WP_001614504.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415758.1;locus_tag=AD08_RS15335;product=NAAT family transporter YchE;protein_id=WP_001614504.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 54397 54693 . - . ID=gene-AD08_RS31645;Name=AD08_RS31645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31645 NZ_JHDJ01000141.1 GeneMarkS-2+ CDS 54397 54693 . - 0 ID=cds-WP_001211521.1;Parent=gene-AD08_RS31645;Dbxref=Genbank:WP_001211521.1;Name=WP_001211521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS31645;product=hypothetical protein;protein_id=WP_001211521.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 54977 56608 . + . ID=gene-AD08_RS15330;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=AD08_RS15330;old_locus_tag=AD08_1430 NZ_JHDJ01000141.1 Protein Homology CDS 54977 56608 . + 0 ID=cds-WP_001467111.1;Parent=gene-AD08_RS15330;Dbxref=Genbank:WP_001467111.1;Name=WP_001467111.1;gbkey=CDS;gene=oppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707150.2;locus_tag=AD08_RS15330;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001467111.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 56694 57614 . + . ID=gene-AD08_RS15325;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=AD08_RS15325;old_locus_tag=AD08_1431 NZ_JHDJ01000141.1 Protein Homology CDS 56694 57614 . + 0 ID=cds-WP_000911112.1;Parent=gene-AD08_RS15325;Dbxref=Genbank:WP_000911112.1;Name=WP_000911112.1;gbkey=CDS;gene=oppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=AD08_RS15325;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911112.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 57629 58537 . + . ID=gene-AD08_RS15320;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=AD08_RS15320;old_locus_tag=AD08_1432 NZ_JHDJ01000141.1 Protein Homology CDS 57629 58537 . + 0 ID=cds-WP_000979661.1;Parent=gene-AD08_RS15320;Dbxref=Genbank:WP_000979661.1;Name=WP_000979661.1;gbkey=CDS;gene=oppC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=AD08_RS15320;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979661.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 58549 59562 . + . ID=gene-AD08_RS15315;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=AD08_RS15315;old_locus_tag=AD08_1433 NZ_JHDJ01000141.1 Protein Homology CDS 58549 59562 . + 0 ID=cds-WP_000110945.1;Parent=gene-AD08_RS15315;Dbxref=Genbank:WP_000110945.1;Name=WP_000110945.1;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309773.1;locus_tag=AD08_RS15315;product=murein tripeptide/oligopeptide ABC transporter ATP binding protein OppD;protein_id=WP_000110945.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 59559 60563 . + . ID=gene-AD08_RS15310;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=AD08_RS15310;old_locus_tag=AD08_1434 NZ_JHDJ01000141.1 Protein Homology CDS 59559 60563 . + 0 ID=cds-WP_000994905.1;Parent=gene-AD08_RS15310;Dbxref=Genbank:WP_000994905.1;Name=WP_000994905.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309774.1;locus_tag=AD08_RS15310;product=murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF;protein_id=WP_000994905.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 60616 60945 . - . ID=gene-AD08_RS15305;Name=AD08_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15305;old_locus_tag=AD08_1435 NZ_JHDJ01000141.1 Protein Homology CDS 60616 60945 . - 0 ID=cds-WP_000366959.1;Parent=gene-AD08_RS15305;Dbxref=Genbank:WP_000366959.1;Name=WP_000366959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309775.2;locus_tag=AD08_RS15305;product=YciU family protein;protein_id=WP_000366959.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 60980 62440 . - . ID=gene-AD08_RS15300;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=AD08_RS15300;old_locus_tag=AD08_1436 NZ_JHDJ01000141.1 Protein Homology CDS 60980 62440 . - 0 ID=cds-WP_000214516.1;Parent=gene-AD08_RS15300;Dbxref=Genbank:WP_000214516.1;Name=WP_000214516.1;gbkey=CDS;gene=cls;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=AD08_RS15300;product=cardiolipin synthase;protein_id=WP_000214516.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 62583 62756 . + . ID=gene-AD08_RS31650;Name=AD08_RS31650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31650 NZ_JHDJ01000141.1 Protein Homology CDS 62583 62756 . + 0 ID=cds-WP_001309467.1;Parent=gene-AD08_RS31650;Dbxref=Genbank:WP_001309467.1;Name=WP_001309467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=AD08_RS31650;product=YciY family protein;protein_id=WP_001309467.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 62811 64064 . - . ID=gene-AD08_RS15295;Name=kch;gbkey=Gene;gene=kch;gene_biotype=protein_coding;locus_tag=AD08_RS15295;old_locus_tag=AD08_1437 NZ_JHDJ01000141.1 Protein Homology CDS 62811 64064 . - 0 ID=cds-WP_001295624.1;Parent=gene-AD08_RS15295;Dbxref=Genbank:WP_001295624.1;Name=WP_001295624.1;gbkey=CDS;gene=kch;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415766.1;locus_tag=AD08_RS15295;product=voltage-gated potassium channel protein;protein_id=WP_001295624.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 64364 64660 . - . ID=gene-AD08_RS15290;Name=AD08_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15290;old_locus_tag=AD08_1438 NZ_JHDJ01000141.1 Protein Homology CDS 64364 64660 . - 0 ID=cds-WP_001507303.1;Parent=gene-AD08_RS15290;Dbxref=Genbank:WP_001507303.1;Name=WP_001507303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009448315.1;locus_tag=AD08_RS15290;product=YciI family protein;protein_id=WP_001507303.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 64884 65603 . + . ID=gene-AD08_RS15285;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=AD08_RS15285;old_locus_tag=AD08_1439 NZ_JHDJ01000141.1 Protein Homology CDS 64884 65603 . + 0 ID=cds-WP_001360141.1;Parent=gene-AD08_RS15285;Dbxref=Genbank:WP_001360141.1;Name=WP_001360141.1;gbkey=CDS;gene=tonB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415768.1;locus_tag=AD08_RS15285;product=TonB system transport protein TonB;protein_id=WP_001360141.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 65643 66041 . - . ID=gene-AD08_RS15280;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=AD08_RS15280;old_locus_tag=AD08_1440 NZ_JHDJ01000141.1 Protein Homology CDS 65643 66041 . - 0 ID=cds-WP_000108160.1;Parent=gene-AD08_RS15280;Dbxref=Genbank:WP_000108160.1;Name=WP_000108160.1;gbkey=CDS;gene=yciA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415769.1;locus_tag=AD08_RS15280;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000108160.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 66146 66685 . - . ID=gene-AD08_RS15275;Name=AD08_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15275;old_locus_tag=AD08_1441 NZ_JHDJ01000141.1 Protein Homology CDS 66146 66685 . - 0 ID=cds-WP_000808667.1;Parent=gene-AD08_RS15275;Dbxref=Genbank:WP_000808667.1;Name=WP_000808667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309781.1;locus_tag=AD08_RS15275;product=septation protein A;protein_id=WP_000808667.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 66715 67458 . - . ID=gene-AD08_RS15270;Name=AD08_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15270;old_locus_tag=AD08_1442 NZ_JHDJ01000141.1 Protein Homology CDS 66715 67458 . - 0 ID=cds-WP_000028545.1;Parent=gene-AD08_RS15270;Dbxref=Genbank:WP_000028545.1;Name=WP_000028545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415771.1;locus_tag=AD08_RS15270;product=UPF0259 family protein;protein_id=WP_000028545.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq pseudogene 67486 67575 . - . ID=gene-AD08_RS31100;Name=AD08_RS31100;end_range=67575,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31100;partial=true;pseudo=true NZ_JHDJ01000141.1 Protein Homology CDS 67486 67575 . - 0 ID=cds-AD08_RS31100;Parent=gene-AD08_RS31100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=67575,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=AD08_RS31100;partial=true;product=YkgJ family cysteine cluster protein;pseudo=true;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 67815 68453 . + . ID=gene-AD08_RS15265;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=AD08_RS15265;old_locus_tag=AD08_1443 NZ_JHDJ01000141.1 Protein Homology CDS 67815 68453 . + 0 ID=cds-WP_000737224.1;Parent=gene-AD08_RS15265;Dbxref=Genbank:WP_000737224.1;Name=WP_000737224.1;gbkey=CDS;gene=ompW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309783.1;locus_tag=AD08_RS15265;product=outer membrane protein OmpW;protein_id=WP_000737224.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 68499 69629 . - . ID=gene-AD08_RS15260;Name=AD08_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15260;old_locus_tag=AD08_1444 NZ_JHDJ01000141.1 Protein Homology CDS 68499 69629 . - 0 ID=cds-WP_000113674.1;Parent=gene-AD08_RS15260;Dbxref=Genbank:WP_000113674.1;Name=WP_000113674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309784.1;locus_tag=AD08_RS15260;product=tyrosine-type recombinase/integrase;protein_id=WP_000113674.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 69607 69855 . - . ID=gene-AD08_RS0125550;Name=AD08_RS0125550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125550 NZ_JHDJ01000141.1 Protein Homology CDS 69607 69855 . - 0 ID=cds-WP_000113189.1;Parent=gene-AD08_RS0125550;Dbxref=Genbank:WP_000113189.1;Name=WP_000113189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309785.1;locus_tag=AD08_RS0125550;product=excisionase;protein_id=WP_000113189.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 69920 72391 . - . ID=gene-AD08_RS15255;Name=AD08_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15255;old_locus_tag=AD08_1445 NZ_JHDJ01000141.1 Protein Homology CDS 69920 72391 . - 0 ID=cds-WP_032218507.1;Parent=gene-AD08_RS15255;Dbxref=Genbank:WP_032218507.1;Name=WP_032218507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309786.1;locus_tag=AD08_RS15255;product=exonuclease;protein_id=WP_032218507.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 72451 72675 . - . ID=gene-AD08_RS0125555;Name=AD08_RS0125555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125555 NZ_JHDJ01000141.1 Protein Homology CDS 72451 72675 . - 0 ID=cds-WP_001454847.1;Parent=gene-AD08_RS0125555;Dbxref=Genbank:WP_001454847.1;Name=WP_001454847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001586464.1;locus_tag=AD08_RS0125555;product=DUF1482 family protein;protein_id=WP_001454847.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 72672 72860 . - . ID=gene-AD08_RS15250;Name=AD08_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15250;old_locus_tag=AD08_1447 NZ_JHDJ01000141.1 Protein Homology CDS 72672 72860 . - 0 ID=cds-WP_000449175.1;Parent=gene-AD08_RS15250;Dbxref=Genbank:WP_000449175.1;Name=WP_000449175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310241.1;locus_tag=AD08_RS15250;product=cell division inhibitor;protein_id=WP_000449175.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 73432 73710 . + . ID=gene-AD08_RS15245;Name=AD08_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15245;old_locus_tag=AD08_1449 NZ_JHDJ01000141.1 Protein Homology CDS 73432 73710 . + 0 ID=cds-WP_016239000.1;Parent=gene-AD08_RS15245;Dbxref=Genbank:WP_016239000.1;Name=WP_016239000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000358768.1;locus_tag=AD08_RS15245;product=hypothetical protein;protein_id=WP_016239000.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 73670 74071 . - . ID=gene-AD08_RS15240;Name=AD08_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15240;old_locus_tag=AD08_1450 NZ_JHDJ01000141.1 Protein Homology CDS 73670 74071 . - 0 ID=cds-WP_001339605.1;Parent=gene-AD08_RS15240;Dbxref=Genbank:WP_001339605.1;Name=WP_001339605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000394555.1;locus_tag=AD08_RS15240;product=hypothetical protein;protein_id=WP_001339605.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 74083 74235 . - . ID=gene-AD08_RS0125565;Name=AD08_RS0125565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125565 NZ_JHDJ01000141.1 Protein Homology CDS 74083 74235 . - 0 ID=cds-WP_001725971.1;Parent=gene-AD08_RS0125565;Dbxref=Genbank:WP_001725971.1;Name=WP_001725971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309092.1;locus_tag=AD08_RS0125565;product=DUF1391 family protein;protein_id=WP_001725971.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 74501 74920 . - . ID=gene-AD08_RS0125570;Name=AD08_RS0125570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125570 NZ_JHDJ01000141.1 Protein Homology CDS 74501 74920 . - 0 ID=cds-WP_000362153.1;Parent=gene-AD08_RS0125570;Dbxref=Genbank:WP_000362153.1;Name=WP_000362153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362153.1;locus_tag=AD08_RS0125570;product=hypothetical protein;protein_id=WP_000362153.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 75021 75302 . + . ID=gene-AD08_RS0125575;Name=AD08_RS0125575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125575 NZ_JHDJ01000141.1 Protein Homology CDS 75021 75302 . + 0 ID=cds-WP_000391950.1;Parent=gene-AD08_RS0125575;Dbxref=Genbank:WP_000391950.1;Name=WP_000391950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000391949.1;locus_tag=AD08_RS0125575;product=hypothetical protein;protein_id=WP_000391950.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 75286 75711 . + . ID=gene-AD08_RS15235;Name=AD08_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15235;old_locus_tag=AD08_1453 NZ_JHDJ01000141.1 Protein Homology CDS 75286 75711 . + 0 ID=cds-WP_000693888.1;Parent=gene-AD08_RS15235;Dbxref=Genbank:WP_000693888.1;Name=WP_000693888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310304.1;locus_tag=AD08_RS15235;product=Rha family transcriptional regulator;protein_id=WP_000693888.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 75734 76696 . + . ID=gene-AD08_RS15230;Name=AD08_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15230;old_locus_tag=AD08_1454 NZ_JHDJ01000141.1 Protein Homology CDS 75734 76696 . + 0 ID=cds-WP_000095673.1;Parent=gene-AD08_RS15230;Dbxref=Genbank:WP_000095673.1;Name=WP_000095673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310303.2;locus_tag=AD08_RS15230;product=DNA-binding protein;protein_id=WP_000095673.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 76703 77449 . + . ID=gene-AD08_RS15225;Name=AD08_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15225;old_locus_tag=AD08_1455 NZ_JHDJ01000141.1 Protein Homology CDS 76703 77449 . + 0 ID=cds-WP_000788950.1;Parent=gene-AD08_RS15225;Dbxref=Genbank:WP_000788950.1;Name=WP_000788950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309101.1;locus_tag=AD08_RS15225;product=ATP-binding protein;protein_id=WP_000788950.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 77471 78241 . + . ID=gene-AD08_RS15220;Name=AD08_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15220;old_locus_tag=AD08_1456 NZ_JHDJ01000141.1 Protein Homology CDS 77471 78241 . + 0 ID=cds-WP_000450998.1;Parent=gene-AD08_RS15220;Dbxref=Genbank:WP_000450998.1;Name=WP_000450998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309102.1;locus_tag=AD08_RS15220;product=DUF1627 domain-containing protein;protein_id=WP_000450998.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 78257 78682 . + . ID=gene-AD08_RS15215;Name=AD08_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15215;old_locus_tag=AD08_1457 NZ_JHDJ01000141.1 Protein Homology CDS 78257 78682 . + 0 ID=cds-WP_001151161.1;Parent=gene-AD08_RS15215;Dbxref=Genbank:WP_001151161.1;Name=WP_001151161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232644.1;locus_tag=AD08_RS15215;product=DUF977 family protein;protein_id=WP_001151161.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 78857 79522 . + . ID=gene-AD08_RS15210;Name=AD08_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15210;old_locus_tag=AD08_1459 NZ_JHDJ01000141.1 Protein Homology CDS 78857 79522 . + 0 ID=cds-WP_000150294.1;Parent=gene-AD08_RS15210;Dbxref=Genbank:WP_000150294.1;Name=WP_000150294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235606.1;locus_tag=AD08_RS15210;product=epoxyqueuosine reductase QueH;protein_id=WP_000150294.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 79707 80825 . + . ID=gene-AD08_RS15205;Name=AD08_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15205;old_locus_tag=AD08_1460 NZ_JHDJ01000141.1 Protein Homology CDS 79707 80825 . + 0 ID=cds-WP_001427299.1;Parent=gene-AD08_RS15205;Dbxref=Genbank:WP_001427299.1;Name=WP_001427299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001427299.1;locus_tag=AD08_RS15205;product=DNA cytosine methyltransferase;protein_id=WP_001427299.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 80839 81717 . + . ID=gene-AD08_RS15200;Name=AD08_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15200;old_locus_tag=AD08_1461 NZ_JHDJ01000141.1 Protein Homology CDS 80839 81717 . + 0 ID=cds-WP_001012717.1;Parent=gene-AD08_RS15200;Dbxref=Genbank:WP_001012717.1;Name=WP_001012717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012717.1;locus_tag=AD08_RS15200;product=type II restriction endonuclease NgoMIV;protein_id=WP_001012717.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 81888 82160 . + . ID=gene-AD08_RS0125580;Name=AD08_RS0125580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125580 NZ_JHDJ01000141.1 Protein Homology CDS 81888 82160 . + 0 ID=cds-WP_032155207.1;Parent=gene-AD08_RS0125580;Dbxref=Genbank:WP_032155207.1;Name=WP_032155207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309802.1;locus_tag=AD08_RS0125580;product=hypothetical protein;protein_id=WP_032155207.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 82162 83220 . + . ID=gene-AD08_RS15195;Name=AD08_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15195;old_locus_tag=AD08_1463 NZ_JHDJ01000141.1 Protein Homology CDS 82162 83220 . + 0 ID=cds-WP_032218508.1;Parent=gene-AD08_RS15195;Dbxref=Genbank:WP_032218508.1;Name=WP_032218508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265256.1;locus_tag=AD08_RS15195;product=DUF968 domain-containing protein;protein_id=WP_032218508.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 83221 83601 . + . ID=gene-AD08_RS15190;Name=AD08_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15190;old_locus_tag=AD08_1464 NZ_JHDJ01000141.1 Protein Homology CDS 83221 83601 . + 0 ID=cds-WP_032218510.1;Parent=gene-AD08_RS15190;Dbxref=Genbank:WP_032218510.1;Name=WP_032218510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140009.1;locus_tag=AD08_RS15190;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_032218510.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 83598 84419 . + . ID=gene-AD08_RS15185;Name=AD08_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15185;old_locus_tag=AD08_1465 NZ_JHDJ01000141.1 Protein Homology CDS 83598 84419 . + 0 ID=cds-WP_032218511.1;Parent=gene-AD08_RS15185;Dbxref=Genbank:WP_032218511.1;Name=WP_032218511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707426.1;locus_tag=AD08_RS15185;product=antitermination protein;protein_id=WP_032218511.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq gene 84644 84841 . + . ID=gene-AD08_RS15180;Name=AD08_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15180;old_locus_tag=AD08_1466 NZ_JHDJ01000141.1 Protein Homology CDS 84644 84841 . + 0 ID=cds-WP_016232130.1-2;Parent=gene-AD08_RS15180;Dbxref=Genbank:WP_016232130.1;Name=WP_016232130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309806.2;locus_tag=AD08_RS15180;product=hypothetical protein;protein_id=WP_016232130.1;transl_table=11 NZ_JHDJ01000141.1 RefSeq pseudogene 84992 85189 . + . ID=gene-AD08_RS15175;Name=AD08_RS15175;end_range=85189,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS15175;old_locus_tag=AD08_1467;partial=true;pseudo=true NZ_JHDJ01000141.1 Protein Homology CDS 84992 85189 . + 0 ID=cds-AD08_RS15175;Parent=gene-AD08_RS15175;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=85189,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309807.1;locus_tag=AD08_RS15175;partial=true;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000142.1 1 49474 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000142.1 RefSeq region 1 49474 . + . ID=NZ_JHDJ01000142.1:1..49474;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000142.1 RefSeq gene 1 264 . + . ID=gene-AD08_RS0125595;Name=AD08_RS0125595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125595;partial=true;start_range=.,1 NZ_JHDJ01000142.1 Protein Homology CDS 1 264 . + 0 ID=cds-WP_032218520.1-2;Parent=gene-AD08_RS0125595;Dbxref=Genbank:WP_032218520.1;Name=WP_032218520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310013.1;locus_tag=AD08_RS0125595;partial=true;product=tail protein;protein_id=WP_032218520.1;start_range=.,1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 210 842 . + . ID=gene-AD08_RS15170;Name=AD08_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15170;old_locus_tag=AD08_1469 NZ_JHDJ01000142.1 Protein Homology CDS 210 842 . + 0 ID=cds-WP_061089814.1-3;Parent=gene-AD08_RS15170;Dbxref=Genbank:WP_061089814.1;Name=WP_061089814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188718.1;locus_tag=AD08_RS15170;product=tail assembly protein;protein_id=WP_061089814.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 1186 4659 . + . ID=gene-AD08_RS15165;Name=AD08_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15165;old_locus_tag=AD08_1471 NZ_JHDJ01000142.1 Protein Homology CDS 1186 4659 . + 0 ID=cds-WP_032218522.1;Parent=gene-AD08_RS15165;Dbxref=Genbank:WP_032218522.1;Name=WP_032218522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309833.1;locus_tag=AD08_RS15165;product=host specificity protein J;protein_id=WP_032218522.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq pseudogene 4727 5326 . + . ID=gene-AD08_RS0125605;Name=AD08_RS0125605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125605;pseudo=true NZ_JHDJ01000142.1 Protein Homology CDS 4727 5326 . + 0 ID=cds-AD08_RS0125605;Parent=gene-AD08_RS0125605;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706647.1;locus_tag=AD08_RS0125605;product=Ail/Lom family outer membrane beta-barrel protein;pseudo=true;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 5478 8504 . + . ID=gene-AD08_RS0125610;Name=AD08_RS0125610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125610 NZ_JHDJ01000142.1 Protein Homology CDS 5478 8504 . + 0 ID=cds-WP_001403614.1;Parent=gene-AD08_RS0125610;Dbxref=Genbank:WP_001403614.1;Name=WP_001403614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001621424.1;locus_tag=AD08_RS0125610;product=Side tail fiber protein from bacteriophage origin;protein_id=WP_001403614.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 8504 9088 . + . ID=gene-AD08_RS15160;Name=AD08_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15160;old_locus_tag=AD08_1477 NZ_JHDJ01000142.1 Protein Homology CDS 8504 9088 . + 0 ID=cds-WP_000885577.1;Parent=gene-AD08_RS15160;Dbxref=Genbank:WP_000885577.1;Name=WP_000885577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885581.1;locus_tag=AD08_RS15160;product=tail fiber assembly protein;protein_id=WP_000885577.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 9143 9811 . - . ID=gene-AD08_RS0125615;Name=AD08_RS0125615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125615 NZ_JHDJ01000142.1 Protein Homology CDS 9143 9811 . - 0 ID=cds-WP_000240999.1;Parent=gene-AD08_RS0125615;Dbxref=Genbank:WP_000240999.1;Name=WP_000240999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707858.1;locus_tag=AD08_RS0125615;product=class I SAM-dependent methyltransferase;protein_id=WP_000240999.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 9868 10137 . + . ID=gene-AD08_RS15155;Name=AD08_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15155;old_locus_tag=AD08_1479 NZ_JHDJ01000142.1 Protein Homology CDS 9868 10137 . + 0 ID=cds-WP_000937495.1;Parent=gene-AD08_RS15155;Dbxref=Genbank:WP_000937495.1;Name=WP_000937495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000937495.1;locus_tag=AD08_RS15155;product=tail fiber assembly protein;protein_id=WP_000937495.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 10549 11106 . - . ID=gene-AD08_RS15145;Name=AD08_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15145;old_locus_tag=AD08_1481 NZ_JHDJ01000142.1 Protein Homology CDS 10549 11106 . - 0 ID=cds-WP_001348267.1;Parent=gene-AD08_RS15145;Dbxref=Genbank:WP_001348267.1;Name=WP_001348267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530027.1;locus_tag=AD08_RS15145;product=Rha family transcriptional regulator;protein_id=WP_001348267.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq pseudogene 11103 11379 . - . ID=gene-AD08_RS31105;Name=AD08_RS31105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31105;pseudo=true NZ_JHDJ01000142.1 Protein Homology CDS 11103 11379 . - 0 ID=cds-AD08_RS31105;Parent=gene-AD08_RS31105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296031.1;locus_tag=AD08_RS31105;product=ash family protein;pseudo=true;transl_table=11 NZ_JHDJ01000142.1 RefSeq pseudogene 11565 11690 . + . ID=gene-AD08_RS28650;Name=AD08_RS28650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS28650;old_locus_tag=AD08_1483;partial=true;pseudo=true;start_range=.,11565 NZ_JHDJ01000142.1 Protein Homology CDS 11565 11690 . + 0 ID=cds-AD08_RS28650;Parent=gene-AD08_RS28650;Note=receptor for colicin S4%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415772.1;locus_tag=AD08_RS28650;partial=true;product=outer membrane protein OmpW;pseudo=true;start_range=.,11565;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 11750 12256 . - . ID=gene-AD08_RS15140;Name=AD08_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15140;old_locus_tag=AD08_1484 NZ_JHDJ01000142.1 Protein Homology CDS 11750 12256 . - 0 ID=cds-WP_001079505.1;Parent=gene-AD08_RS15140;Dbxref=Genbank:WP_001079505.1;Name=WP_001079505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415773.1;locus_tag=AD08_RS15140;product=ferritin-like domain-containing protein;protein_id=WP_001079505.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 12302 12802 . - . ID=gene-AD08_RS15135;Name=AD08_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15135;old_locus_tag=AD08_1485 NZ_JHDJ01000142.1 Protein Homology CDS 12302 12802 . - 0 ID=cds-WP_001056490.1;Parent=gene-AD08_RS15135;Dbxref=Genbank:WP_001056490.1;Name=WP_001056490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415774.1;locus_tag=AD08_RS15135;product=ferritin-like domain-containing protein;protein_id=WP_001056490.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 12888 13067 . - . ID=gene-AD08_RS15130;Name=AD08_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15130;old_locus_tag=AD08_1486 NZ_JHDJ01000142.1 Protein Homology CDS 12888 13067 . - 0 ID=cds-WP_000807651.1;Parent=gene-AD08_RS15130;Dbxref=Genbank:WP_000807651.1;Name=WP_000807651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309858.2;locus_tag=AD08_RS15130;product=general stress protein;protein_id=WP_000807651.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 13448 14254 . - . ID=gene-AD08_RS15125;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=AD08_RS15125;old_locus_tag=AD08_1487 NZ_JHDJ01000142.1 Protein Homology CDS 13448 14254 . - 0 ID=cds-WP_000443067.1;Parent=gene-AD08_RS15125;Dbxref=Genbank:WP_000443067.1;Name=WP_000443067.1;gbkey=CDS;gene=trpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415776.1;locus_tag=AD08_RS15125;product=tryptophan synthase subunit alpha;protein_id=WP_000443067.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 14254 15447 . - . ID=gene-AD08_RS15120;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=AD08_RS15120;old_locus_tag=AD08_1488 NZ_JHDJ01000142.1 Protein Homology CDS 14254 15447 . - 0 ID=cds-WP_000209520.1;Parent=gene-AD08_RS15120;Dbxref=Genbank:WP_000209520.1;Name=WP_000209520.1;gbkey=CDS;gene=trpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016158396.1;locus_tag=AD08_RS15120;product=tryptophan synthase subunit beta;protein_id=WP_000209520.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 15459 16817 . - . ID=gene-AD08_RS15115;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=AD08_RS15115;old_locus_tag=AD08_1489 NZ_JHDJ01000142.1 Protein Homology CDS 15459 16817 . - 0 ID=cds-WP_001340286.1;Parent=gene-AD08_RS15115;Dbxref=Genbank:WP_001340286.1;Name=WP_001340286.1;gbkey=CDS;gene=trpCF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309861.2;locus_tag=AD08_RS15115;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_001340286.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 16821 18416 . - . ID=gene-AD08_RS15110;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=AD08_RS15110;old_locus_tag=AD08_1490 NZ_JHDJ01000142.1 Protein Homology CDS 16821 18416 . - 0 ID=cds-WP_000763511.1;Parent=gene-AD08_RS15110;Dbxref=Genbank:WP_000763511.1;Name=WP_000763511.1;gbkey=CDS;gene=trpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=AD08_RS15110;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000763511.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 18416 19978 . - . ID=gene-AD08_RS15105;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=AD08_RS15105;old_locus_tag=AD08_1491 NZ_JHDJ01000142.1 Protein Homology CDS 18416 19978 . - 0 ID=cds-WP_032218526.1;Parent=gene-AD08_RS15105;Dbxref=Genbank:WP_032218526.1;Name=WP_032218526.1;gbkey=CDS;gene=trpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415780.1;locus_tag=AD08_RS15105;product=anthranilate synthase component I;protein_id=WP_032218526.1;transl_table=11 NZ_JHDJ01000142.1 cmsearch sequence_feature 20000 20093 . - . ID=id-NZ_JHDJ01000142.1:20000..20093;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_JHDJ01000142.1 RefSeq gene 20070 20114 . - . ID=gene-AD08_RS28655;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=AD08_RS28655 NZ_JHDJ01000142.1 Protein Homology CDS 20070 20114 . - 0 ID=cds-WP_001700591.1;Parent=gene-AD08_RS28655;Dbxref=Genbank:WP_001700591.1;Name=WP_001700591.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309864.1;locus_tag=AD08_RS28655;product=trp operon leader peptide;protein_id=WP_001700591.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 20252 21133 . + . ID=gene-AD08_RS15100;Name=yciV;gbkey=Gene;gene=yciV;gene_biotype=protein_coding;locus_tag=AD08_RS15100;old_locus_tag=AD08_1492 NZ_JHDJ01000142.1 Protein Homology CDS 20252 21133 . + 0 ID=cds-WP_001285661.1;Parent=gene-AD08_RS15100;Dbxref=Genbank:WP_001285661.1;Name=WP_001285661.1;gbkey=CDS;gene=yciV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415782.1;locus_tag=AD08_RS15100;product=5'-3' exoribonuclease;protein_id=WP_001285661.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 21130 21750 . + . ID=gene-AD08_RS15095;Name=AD08_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15095;old_locus_tag=AD08_1493 NZ_JHDJ01000142.1 Protein Homology CDS 21130 21750 . + 0 ID=cds-WP_001295575.1;Parent=gene-AD08_RS15095;Dbxref=Genbank:WP_001295575.1;Name=WP_001295575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=AD08_RS15095;product=threonylcarbamoyl-AMP synthase;protein_id=WP_001295575.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 21778 23673 . + . ID=gene-AD08_RS15090;Name=AD08_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15090;old_locus_tag=AD08_1494 NZ_JHDJ01000142.1 Protein Homology CDS 21778 23673 . + 0 ID=cds-WP_001326916.1;Parent=gene-AD08_RS15090;Dbxref=Genbank:WP_001326916.1;Name=WP_001326916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415784.1;locus_tag=AD08_RS15090;product=DUF2207 domain-containing protein;protein_id=WP_001326916.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 23884 24759 . + . ID=gene-AD08_RS15085;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=AD08_RS15085;old_locus_tag=AD08_1495 NZ_JHDJ01000142.1 Protein Homology CDS 23884 24759 . + 0 ID=cds-WP_001488737.1;Parent=gene-AD08_RS15085;Dbxref=Genbank:WP_001488737.1;Name=WP_001488737.1;gbkey=CDS;gene=rluB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415785.1;locus_tag=AD08_RS15085;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001488737.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 24799 25389 . - . ID=gene-AD08_RS15080;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=AD08_RS15080;old_locus_tag=AD08_1496 NZ_JHDJ01000142.1 Protein Homology CDS 24799 25389 . - 0 ID=cds-WP_001278906.1;Parent=gene-AD08_RS15080;Dbxref=Genbank:WP_001278906.1;Name=WP_001278906.1;gbkey=CDS;gene=cobO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415786.1;locus_tag=AD08_RS15080;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278906.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 25386 26144 . - . ID=gene-AD08_RS15075;Name=AD08_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15075;old_locus_tag=AD08_1497 NZ_JHDJ01000142.1 Protein Homology CDS 25386 26144 . - 0 ID=cds-WP_001529924.1;Parent=gene-AD08_RS15075;Dbxref=Genbank:WP_001529924.1;Name=WP_001529924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415787.1;locus_tag=AD08_RS15075;product=YciK family oxidoreductase;protein_id=WP_001529924.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 26364 27413 . + . ID=gene-AD08_RS15070;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=AD08_RS15070;old_locus_tag=AD08_1498 NZ_JHDJ01000142.1 Protein Homology CDS 26364 27413 . + 0 ID=cds-WP_000422045.1;Parent=gene-AD08_RS15070;Dbxref=Genbank:WP_000422045.1;Name=WP_000422045.1;gbkey=CDS;gene=sohB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415788.1;locus_tag=AD08_RS15070;product=protease SohB;protein_id=WP_000422045.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 27449 27700 . - . ID=gene-AD08_RS15065;Name=AD08_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15065;old_locus_tag=AD08_1499 NZ_JHDJ01000142.1 Protein Homology CDS 27449 27700 . - 0 ID=cds-WP_001031530.1;Parent=gene-AD08_RS15065;Dbxref=Genbank:WP_001031530.1;Name=WP_001031530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309872.1;locus_tag=AD08_RS15065;product=YciN family protein;protein_id=WP_001031530.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 28080 30677 . + . ID=gene-AD08_RS15060;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=AD08_RS15060;old_locus_tag=AD08_1500 NZ_JHDJ01000142.1 Protein Homology CDS 28080 30677 . + 0 ID=cds-WP_001460827.1;Parent=gene-AD08_RS15060;Dbxref=Genbank:WP_001460827.1;Name=WP_001460827.1;gbkey=CDS;gene=topA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=AD08_RS15060;product=type I DNA topoisomerase;protein_id=WP_001460827.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 30887 31861 . + . ID=gene-AD08_RS15055;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=AD08_RS15055;old_locus_tag=AD08_1501 NZ_JHDJ01000142.1 Protein Homology CDS 30887 31861 . + 0 ID=cds-WP_000776253.1;Parent=gene-AD08_RS15055;Dbxref=Genbank:WP_000776253.1;Name=WP_000776253.1;gbkey=CDS;gene=cysB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=AD08_RS15055;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776253.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 32156 32320 . + . ID=gene-AD08_RS15050;Name=AD08_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15050;old_locus_tag=AD08_1502 NZ_JHDJ01000142.1 Protein Homology CDS 32156 32320 . + 0 ID=cds-WP_000908596.1;Parent=gene-AD08_RS15050;Dbxref=Genbank:WP_000908596.1;Name=WP_000908596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707183.1;locus_tag=AD08_RS15050;product=YmiA family putative membrane protein;protein_id=WP_000908596.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 32323 32490 . + . ID=gene-AD08_RS15045;Name=AD08_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15045;old_locus_tag=AD08_1503 NZ_JHDJ01000142.1 Protein Homology CDS 32323 32490 . + 0 ID=cds-WP_001297116.1;Parent=gene-AD08_RS15045;Dbxref=Genbank:WP_001297116.1;Name=WP_001297116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588450.2;locus_tag=AD08_RS15045;product=hypothetical protein;protein_id=WP_001297116.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 32604 32699 . + . ID=gene-AD08_RS31655;Name=AD08_RS31655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31655 NZ_JHDJ01000142.1 Protein Homology CDS 32604 32699 . + 0 ID=cds-WP_001310756.1;Parent=gene-AD08_RS31655;Dbxref=Genbank:WP_001310756.1;Name=WP_001310756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518771.1;locus_tag=AD08_RS31655;product=hypothetical protein;protein_id=WP_001310756.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 32863 35538 . + . ID=gene-AD08_RS15040;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=AD08_RS15040;old_locus_tag=AD08_1504 NZ_JHDJ01000142.1 Protein Homology CDS 32863 35538 . + 0 ID=cds-WP_000099534.1;Parent=gene-AD08_RS15040;Dbxref=Genbank:WP_000099534.1;Name=WP_000099534.1;gbkey=CDS;gene=acnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415792.1;locus_tag=AD08_RS15040;product=aconitate hydratase AcnA;protein_id=WP_000099534.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 35602 36192 . - . ID=gene-AD08_RS15035;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=AD08_RS15035;old_locus_tag=AD08_1505 NZ_JHDJ01000142.1 Protein Homology CDS 35602 36192 . - 0 ID=cds-WP_001176295.1;Parent=gene-AD08_RS15035;Dbxref=Genbank:WP_001176295.1;Name=WP_001176295.1;gbkey=CDS;gene=ribA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309877.1;locus_tag=AD08_RS15035;product=GTP cyclohydrolase II;protein_id=WP_001176295.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 36362 37126 . + . ID=gene-AD08_RS15030;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=AD08_RS15030;old_locus_tag=AD08_1506 NZ_JHDJ01000142.1 Protein Homology CDS 36362 37126 . + 0 ID=cds-WP_001256538.1;Parent=gene-AD08_RS15030;Dbxref=Genbank:WP_001256538.1;Name=WP_001256538.1;gbkey=CDS;gene=pgpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309878.1;locus_tag=AD08_RS15030;product=phosphatidylglycerophosphatase B;protein_id=WP_001256538.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 37275 37583 . + . ID=gene-AD08_RS15025;Name=lapA;gbkey=Gene;gene=lapA;gene_biotype=protein_coding;locus_tag=AD08_RS15025;old_locus_tag=AD08_1507 NZ_JHDJ01000142.1 Protein Homology CDS 37275 37583 . + 0 ID=cds-WP_000876286.1;Parent=gene-AD08_RS15025;Dbxref=Genbank:WP_000876286.1;Name=WP_000876286.1;gbkey=CDS;gene=lapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415795.1;locus_tag=AD08_RS15025;product=lipopolysaccharide assembly protein LapA;protein_id=WP_000876286.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 37590 38759 . + . ID=gene-AD08_RS15020;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=AD08_RS15020;old_locus_tag=AD08_1508 NZ_JHDJ01000142.1 Protein Homology CDS 37590 38759 . + 0 ID=cds-WP_000891353.1;Parent=gene-AD08_RS15020;Dbxref=Genbank:WP_000891353.1;Name=WP_000891353.1;gbkey=CDS;gene=lapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309880.1;locus_tag=AD08_RS15020;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891353.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 38953 39690 . + . ID=gene-AD08_RS15015;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=AD08_RS15015;old_locus_tag=AD08_1510 NZ_JHDJ01000142.1 Protein Homology CDS 38953 39690 . + 0 ID=cds-WP_000176270.1;Parent=gene-AD08_RS15015;Dbxref=Genbank:WP_000176270.1;Name=WP_000176270.1;gbkey=CDS;gene=pyrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415797.1;locus_tag=AD08_RS15015;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_000176270.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 39690 40016 . + . ID=gene-AD08_RS15010;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=AD08_RS15010;old_locus_tag=AD08_1511 NZ_JHDJ01000142.1 Protein Homology CDS 39690 40016 . + 0 ID=cds-WP_001295580.1;Parent=gene-AD08_RS15010;Dbxref=Genbank:WP_001295580.1;Name=WP_001295580.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415798.2;locus_tag=AD08_RS15010;product=stress response translation initiation inhibitor YciH;protein_id=WP_001295580.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 40142 40360 . - . ID=gene-AD08_RS15005;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=AD08_RS15005;old_locus_tag=AD08_1512 NZ_JHDJ01000142.1 Protein Homology CDS 40142 40360 . - 0 ID=cds-WP_000498253.1;Parent=gene-AD08_RS15005;Dbxref=Genbank:WP_000498253.1;Name=WP_000498253.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309883.1;locus_tag=AD08_RS15005;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000498253.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 40629 41378 . - . ID=gene-AD08_RS15000;Name=AD08_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS15000;old_locus_tag=AD08_1513 NZ_JHDJ01000142.1 Protein Homology CDS 40629 41378 . - 0 ID=cds-WP_001088621.1;Parent=gene-AD08_RS15000;Dbxref=Genbank:WP_001088621.1;Name=WP_001088621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309884.1;locus_tag=AD08_RS15000;product=DeoR/GlpR transcriptional regulator;protein_id=WP_001088621.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 41468 41641 . - . ID=gene-AD08_RS14995;Name=AD08_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14995;old_locus_tag=AD08_1514 NZ_JHDJ01000142.1 Protein Homology CDS 41468 41641 . - 0 ID=cds-WP_001288368.1;Parent=gene-AD08_RS14995;Dbxref=Genbank:WP_001288368.1;Name=WP_001288368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165317.1;locus_tag=AD08_RS14995;product=hypothetical protein;protein_id=WP_001288368.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 41789 43774 . - . ID=gene-AD08_RS14990;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=AD08_RS14990;old_locus_tag=AD08_1515 NZ_JHDJ01000142.1 Protein Homology CDS 41789 43774 . - 0 ID=cds-WP_032218531.1;Parent=gene-AD08_RS14990;Dbxref=Genbank:WP_032218531.1;Name=WP_032218531.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415801.1;locus_tag=AD08_RS14990;product=cyclic di-GMP phosphodiesterase;protein_id=WP_032218531.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq pseudogene 43828 43930 . + . ID=gene-AD08_RS30430;Name=AD08_RS30430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30430;old_locus_tag=AD08_1516;pseudo=true NZ_JHDJ01000142.1 Protein Homology CDS 43828 43930 . + 0 ID=cds-AD08_RS30430;Parent=gene-AD08_RS30430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791239.1;locus_tag=AD08_RS30430;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 44008 45942 . - . ID=gene-AD08_RS14985;Name=rnb;gbkey=Gene;gene=rnb;gene_biotype=protein_coding;locus_tag=AD08_RS14985;old_locus_tag=AD08_1517 NZ_JHDJ01000142.1 Protein Homology CDS 44008 45942 . - 0 ID=cds-WP_032218532.1;Parent=gene-AD08_RS14985;Dbxref=Genbank:WP_032218532.1;Name=WP_032218532.1;gbkey=CDS;gene=rnb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415802.1;locus_tag=AD08_RS14985;product=exoribonuclease II;protein_id=WP_032218532.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 46010 47137 . - . ID=gene-AD08_RS14980;Name=AD08_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14980;old_locus_tag=AD08_1518 NZ_JHDJ01000142.1 Protein Homology CDS 46010 47137 . - 0 ID=cds-WP_001335988.1;Parent=gene-AD08_RS14980;Dbxref=Genbank:WP_001335988.1;Name=WP_001335988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415803.2;locus_tag=AD08_RS14980;product=CMD domain-containing protein;protein_id=WP_001335988.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 47281 48069 . - . ID=gene-AD08_RS14975;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=AD08_RS14975;old_locus_tag=AD08_1519 NZ_JHDJ01000142.1 Protein Homology CDS 47281 48069 . - 0 ID=cds-WP_000506490.1;Parent=gene-AD08_RS14975;Dbxref=Genbank:WP_000506490.1;Name=WP_000506490.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=AD08_RS14975;product=enoyl-ACP reductase FabI;protein_id=WP_000506490.1;transl_table=11 NZ_JHDJ01000142.1 RefSeq gene 48407 49474 . - . ID=gene-AD08_RS14970;Name=AD08_RS14970;end_range=49474,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14970;old_locus_tag=AD08_1520;partial=true NZ_JHDJ01000142.1 Protein Homology CDS 48407 49474 . - 0 ID=cds-WP_032217610.1-5;Parent=gene-AD08_RS14970;Dbxref=Genbank:WP_032217610.1;Name=WP_032217610.1;end_range=49474,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS14970;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032217610.1;transl_table=11 ##sequence-region NZ_JHDJ01000143.1 1 154821 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000143.1 RefSeq region 1 154821 . + . ID=NZ_JHDJ01000143.1:1..154821;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000143.1 RefSeq pseudogene 171 1282 . - . ID=gene-AD08_RS28665;Name=AD08_RS28665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS28665;old_locus_tag=AD08_1521;pseudo=true NZ_JHDJ01000143.1 Protein Homology CDS 171 1282 . - 0 ID=cds-AD08_RS28665;Parent=gene-AD08_RS28665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS28665;product=IS4-like element IS421 family transposase;pseudo=true;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 1550 1903 . - . ID=gene-AD08_RS14955;Name=AD08_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14955;old_locus_tag=AD08_1523 NZ_JHDJ01000143.1 Protein Homology CDS 1550 1903 . - 0 ID=cds-WP_077699013.1;Parent=gene-AD08_RS14955;Dbxref=Genbank:WP_077699013.1;Name=WP_077699013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415805.1;locus_tag=AD08_RS14955;product=DUF559 domain-containing protein;protein_id=WP_077699013.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 1971 2777 . - . ID=gene-AD08_RS14950;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=AD08_RS14950;old_locus_tag=AD08_1524 NZ_JHDJ01000143.1 Protein Homology CDS 1971 2777 . - 0 ID=cds-WP_000573407.1;Parent=gene-AD08_RS14950;Dbxref=Genbank:WP_000573407.1;Name=WP_000573407.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415806.1;locus_tag=AD08_RS14950;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000573407.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 2779 3771 . - . ID=gene-AD08_RS14945;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=AD08_RS14945;old_locus_tag=AD08_1525 NZ_JHDJ01000143.1 Protein Homology CDS 2779 3771 . - 0 ID=cds-WP_001128858.1;Parent=gene-AD08_RS14945;Dbxref=Genbank:WP_001128858.1;Name=WP_001128858.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309895.1;locus_tag=AD08_RS14945;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128858.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 3771 4661 . - . ID=gene-AD08_RS14940;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=AD08_RS14940;old_locus_tag=AD08_1526 NZ_JHDJ01000143.1 Protein Homology CDS 3771 4661 . - 0 ID=cds-WP_001146163.1;Parent=gene-AD08_RS14940;Dbxref=Genbank:WP_001146163.1;Name=WP_001146163.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415808.1;locus_tag=AD08_RS14940;product=peptide ABC transporter permease SapC;protein_id=WP_001146163.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 4648 5613 . - . ID=gene-AD08_RS14935;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=AD08_RS14935;old_locus_tag=AD08_1527 NZ_JHDJ01000143.1 Protein Homology CDS 4648 5613 . - 0 ID=cds-WP_000583277.1;Parent=gene-AD08_RS14935;Dbxref=Genbank:WP_000583277.1;Name=WP_000583277.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=AD08_RS14935;product=peptide ABC transporter permease SapB;protein_id=WP_000583277.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 5610 7253 . - . ID=gene-AD08_RS14930;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=AD08_RS14930;old_locus_tag=AD08_1528 NZ_JHDJ01000143.1 Protein Homology CDS 5610 7253 . - 0 ID=cds-WP_001250216.1;Parent=gene-AD08_RS14930;Dbxref=Genbank:WP_001250216.1;Name=WP_001250216.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415810.1;locus_tag=AD08_RS14930;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_001250216.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 7566 7811 . - . ID=gene-AD08_RS14925;Name=AD08_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14925;old_locus_tag=AD08_1529 NZ_JHDJ01000143.1 Protein Homology CDS 7566 7811 . - 0 ID=cds-WP_001015110.1;Parent=gene-AD08_RS14925;Dbxref=Genbank:WP_001015110.1;Name=WP_001015110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415811.1;locus_tag=AD08_RS14925;product=YmjA family protein;protein_id=WP_001015110.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 7945 9330 . - . ID=gene-AD08_RS14920;Name=puuP;gbkey=Gene;gene=puuP;gene_biotype=protein_coding;locus_tag=AD08_RS14920;old_locus_tag=AD08_1530 NZ_JHDJ01000143.1 Protein Homology CDS 7945 9330 . - 0 ID=cds-WP_032218541.1;Parent=gene-AD08_RS14920;Dbxref=Genbank:WP_032218541.1;Name=WP_032218541.1;gbkey=CDS;gene=puuP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415812.4;locus_tag=AD08_RS14920;product=putrescine/proton symporter PuuP;protein_id=WP_032218541.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 9320 9484 . - . ID=gene-AD08_RS31660;Name=AD08_RS31660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31660 NZ_JHDJ01000143.1 Protein Homology CDS 9320 9484 . - 0 ID=cds-WP_120795382.1;Parent=gene-AD08_RS31660;Dbxref=Genbank:WP_120795382.1;Name=WP_120795382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518772.1;locus_tag=AD08_RS31660;product=protein YmjE;protein_id=WP_120795382.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 9633 11051 . - . ID=gene-AD08_RS14915;Name=AD08_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14915;old_locus_tag=AD08_1531 NZ_JHDJ01000143.1 Protein Homology CDS 9633 11051 . - 0 ID=cds-WP_001296746.1;Parent=gene-AD08_RS14915;Dbxref=Genbank:WP_001296746.1;Name=WP_001296746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415813.4;locus_tag=AD08_RS14915;product=glutamate-putrescine ligase;protein_id=WP_001296746.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 11263 12027 . + . ID=gene-AD08_RS14910;Name=puuD;gbkey=Gene;gene=puuD;gene_biotype=protein_coding;locus_tag=AD08_RS14910;old_locus_tag=AD08_1532 NZ_JHDJ01000143.1 Protein Homology CDS 11263 12027 . + 0 ID=cds-WP_001300506.1;Parent=gene-AD08_RS14910;Dbxref=Genbank:WP_001300506.1;Name=WP_001300506.1;gbkey=CDS;gene=puuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415814.4;locus_tag=AD08_RS14910;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=WP_001300506.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 12054 12611 . + . ID=gene-AD08_RS14905;Name=puuR;gbkey=Gene;gene=puuR;gene_biotype=protein_coding;locus_tag=AD08_RS14905;old_locus_tag=AD08_1533 NZ_JHDJ01000143.1 Protein Homology CDS 12054 12611 . + 0 ID=cds-WP_001278727.1;Parent=gene-AD08_RS14905;Dbxref=Genbank:WP_001278727.1;Name=WP_001278727.1;gbkey=CDS;gene=puuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001464354.1;locus_tag=AD08_RS14905;product=HTH-type transcriptional regulator PuuR;protein_id=WP_001278727.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 12886 14373 . + . ID=gene-AD08_RS14900;Name=puuC;gbkey=Gene;gene=puuC;gene_biotype=protein_coding;locus_tag=AD08_RS14900;old_locus_tag=AD08_1534 NZ_JHDJ01000143.1 Protein Homology CDS 12886 14373 . + 0 ID=cds-WP_001009090.1;Parent=gene-AD08_RS14900;Dbxref=Genbank:WP_001009090.1;Name=WP_001009090.1;gbkey=CDS;gene=puuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415816.1;locus_tag=AD08_RS14900;product=aldehyde dehydrogenase PuuC;protein_id=WP_001009090.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 14375 15655 . + . ID=gene-AD08_RS14895;Name=AD08_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14895;old_locus_tag=AD08_1535 NZ_JHDJ01000143.1 Protein Homology CDS 14375 15655 . + 0 ID=cds-WP_000134870.1;Parent=gene-AD08_RS14895;Dbxref=Genbank:WP_000134870.1;Name=WP_000134870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415817.1;locus_tag=AD08_RS14895;product=gamma-glutamylputrescine oxidase;protein_id=WP_000134870.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 15693 16958 . + . ID=gene-AD08_RS14890;Name=AD08_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14890;old_locus_tag=AD08_1536 NZ_JHDJ01000143.1 Protein Homology CDS 15693 16958 . + 0 ID=cds-WP_000069229.1;Parent=gene-AD08_RS14890;Dbxref=Genbank:WP_000069229.1;Name=WP_000069229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415818.1;locus_tag=AD08_RS14890;product=4-aminobutyrate transaminase;protein_id=WP_000069229.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 17078 18055 . - . ID=gene-AD08_RS14885;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=AD08_RS14885;old_locus_tag=AD08_1537 NZ_JHDJ01000143.1 Protein Homology CDS 17078 18055 . - 0 ID=cds-WP_001301108.1;Parent=gene-AD08_RS14885;Dbxref=Genbank:WP_001301108.1;Name=WP_001301108.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415819.4;locus_tag=AD08_RS14885;product=phage shock protein operon transcriptional activator;protein_id=WP_001301108.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 18222 18890 . + . ID=gene-AD08_RS14880;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=AD08_RS14880;old_locus_tag=AD08_1538 NZ_JHDJ01000143.1 Protein Homology CDS 18222 18890 . + 0 ID=cds-WP_000511025.1;Parent=gene-AD08_RS14880;Dbxref=Genbank:WP_000511025.1;Name=WP_000511025.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309908.1;locus_tag=AD08_RS14880;product=phage shock protein PspA;protein_id=WP_000511025.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 18944 19168 . + . ID=gene-AD08_RS14875;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=AD08_RS14875;old_locus_tag=AD08_1539 NZ_JHDJ01000143.1 Protein Homology CDS 18944 19168 . + 0 ID=cds-WP_001274963.1;Parent=gene-AD08_RS14875;Dbxref=Genbank:WP_001274963.1;Name=WP_001274963.1;gbkey=CDS;gene=pspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309909.1;locus_tag=AD08_RS14875;product=envelope stress response membrane protein PspB;protein_id=WP_001274963.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 19168 19527 . + . ID=gene-AD08_RS14870;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=AD08_RS14870;old_locus_tag=AD08_1540 NZ_JHDJ01000143.1 Protein Homology CDS 19168 19527 . + 0 ID=cds-WP_000907387.1;Parent=gene-AD08_RS14870;Dbxref=Genbank:WP_000907387.1;Name=WP_000907387.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309910.1;locus_tag=AD08_RS14870;product=envelope stress response membrane protein PspC;protein_id=WP_000907387.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 19536 19757 . + . ID=gene-AD08_RS14865;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=AD08_RS14865;old_locus_tag=AD08_1541 NZ_JHDJ01000143.1 Protein Homology CDS 19536 19757 . + 0 ID=cds-WP_032218544.1;Parent=gene-AD08_RS14865;Dbxref=Genbank:WP_032218544.1;Name=WP_032218544.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309911.1;locus_tag=AD08_RS14865;product=phage shock protein PspD;protein_id=WP_032218544.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 19832 20146 . + . ID=gene-AD08_RS14860;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=AD08_RS14860;old_locus_tag=AD08_1542 NZ_JHDJ01000143.1 Protein Homology CDS 19832 20146 . + 0 ID=cds-WP_000473109.1;Parent=gene-AD08_RS14860;Dbxref=Genbank:WP_000473109.1;Name=WP_000473109.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415824.1;locus_tag=AD08_RS14860;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000473109.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 20359 22038 . + . ID=gene-AD08_RS14855;Name=AD08_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14855;old_locus_tag=AD08_1543 NZ_JHDJ01000143.1 Protein Homology CDS 20359 22038 . + 0 ID=cds-WP_032218546.1;Parent=gene-AD08_RS14855;Dbxref=Genbank:WP_032218546.1;Name=WP_032218546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415825.4;locus_tag=AD08_RS14855;product=glucosylglycerate phosphorylase;protein_id=WP_032218546.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 22052 23344 . + . ID=gene-AD08_RS14850;Name=AD08_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14850;old_locus_tag=AD08_1544 NZ_JHDJ01000143.1 Protein Homology CDS 22052 23344 . + 0 ID=cds-WP_000597460.1;Parent=gene-AD08_RS14850;Dbxref=Genbank:WP_000597460.1;Name=WP_000597460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415826.1;locus_tag=AD08_RS14850;product=carbohydrate ABC transporter substrate-binding protein;protein_id=WP_000597460.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 23365 24246 . + . ID=gene-AD08_RS14845;Name=AD08_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14845;old_locus_tag=AD08_1545 NZ_JHDJ01000143.1 Protein Homology CDS 23365 24246 . + 0 ID=cds-WP_001080790.1;Parent=gene-AD08_RS14845;Dbxref=Genbank:WP_001080790.1;Name=WP_001080790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415827.1;locus_tag=AD08_RS14845;product=sugar ABC transporter permease;protein_id=WP_001080790.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 24233 25075 . + . ID=gene-AD08_RS14840;Name=AD08_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14840;old_locus_tag=AD08_1546 NZ_JHDJ01000143.1 Protein Homology CDS 24233 25075 . + 0 ID=cds-WP_000224649.1;Parent=gene-AD08_RS14840;Dbxref=Genbank:WP_000224649.1;Name=WP_000224649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415828.1;locus_tag=AD08_RS14840;product=carbohydrate ABC transporter permease;protein_id=WP_000224649.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 25106 26158 . + . ID=gene-AD08_RS14835;Name=AD08_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14835;old_locus_tag=AD08_1547 NZ_JHDJ01000143.1 Protein Homology CDS 25106 26158 . + 0 ID=cds-WP_000737347.1;Parent=gene-AD08_RS14835;Dbxref=Genbank:WP_000737347.1;Name=WP_000737347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415829.1;locus_tag=AD08_RS14835;product=zinc-binding alcohol dehydrogenase;protein_id=WP_000737347.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 26177 26965 . + . ID=gene-AD08_RS14830;Name=AD08_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14830;old_locus_tag=AD08_1548 NZ_JHDJ01000143.1 Protein Homology CDS 26177 26965 . + 0 ID=cds-WP_001397176.1;Parent=gene-AD08_RS14830;Dbxref=Genbank:WP_001397176.1;Name=WP_001397176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415830.2;locus_tag=AD08_RS14830;product=sugar phosphate isomerase/epimerase;protein_id=WP_001397176.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 26975 28030 . + . ID=gene-AD08_RS14825;Name=AD08_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14825;old_locus_tag=AD08_1549 NZ_JHDJ01000143.1 Protein Homology CDS 26975 28030 . + 0 ID=cds-WP_001300711.1;Parent=gene-AD08_RS14825;Dbxref=Genbank:WP_001300711.1;Name=WP_001300711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415831.1;locus_tag=AD08_RS14825;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_001300711.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 28027 30294 . + . ID=gene-AD08_RS14820;Name=ycjT;gbkey=Gene;gene=ycjT;gene_biotype=protein_coding;locus_tag=AD08_RS14820;old_locus_tag=AD08_1550 NZ_JHDJ01000143.1 Protein Homology CDS 28027 30294 . + 0 ID=cds-WP_000198036.1;Parent=gene-AD08_RS14820;Dbxref=Genbank:WP_000198036.1;Name=WP_000198036.1;gbkey=CDS;gene=ycjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415832.1;locus_tag=AD08_RS14820;product=kojibiose phosphorylase;protein_id=WP_000198036.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 30291 30950 . + . ID=gene-AD08_RS14815;Name=pgmB;gbkey=Gene;gene=pgmB;gene_biotype=protein_coding;locus_tag=AD08_RS14815;old_locus_tag=AD08_1551 NZ_JHDJ01000143.1 Protein Homology CDS 30291 30950 . + 0 ID=cds-WP_000775794.1;Parent=gene-AD08_RS14815;Dbxref=Genbank:WP_000775794.1;Name=WP_000775794.1;gbkey=CDS;gene=pgmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415833.1;locus_tag=AD08_RS14815;product=beta-phosphoglucomutase;protein_id=WP_000775794.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 30964 32046 . + . ID=gene-AD08_RS14810;Name=AD08_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14810;old_locus_tag=AD08_1552 NZ_JHDJ01000143.1 Protein Homology CDS 30964 32046 . + 0 ID=cds-WP_000057955.1;Parent=gene-AD08_RS14810;Dbxref=Genbank:WP_000057955.1;Name=WP_000057955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309924.1;locus_tag=AD08_RS14810;product=ABC transporter ATP-binding protein;protein_id=WP_000057955.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 32091 32996 . + . ID=gene-AD08_RS14805;Name=ompG;gbkey=Gene;gene=ompG;gene_biotype=protein_coding;locus_tag=AD08_RS14805;old_locus_tag=AD08_1553 NZ_JHDJ01000143.1 Protein Homology CDS 32091 32996 . + 0 ID=cds-WP_000735257.1;Parent=gene-AD08_RS14805;Dbxref=Genbank:WP_000735257.1;Name=WP_000735257.1;gbkey=CDS;gene=ompG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415835.1;locus_tag=AD08_RS14805;product=monomeric porin OmpG;protein_id=WP_000735257.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 33107 34105 . - . ID=gene-AD08_RS14800;Name=AD08_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14800;old_locus_tag=AD08_1554 NZ_JHDJ01000143.1 Protein Homology CDS 33107 34105 . - 0 ID=cds-WP_000075375.1;Parent=gene-AD08_RS14800;Dbxref=Genbank:WP_000075375.1;Name=WP_000075375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415836.1;locus_tag=AD08_RS14800;product=LacI family transcriptional regulator;protein_id=WP_000075375.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 34261 35658 . + . ID=gene-AD08_RS14795;Name=AD08_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14795;old_locus_tag=AD08_1555 NZ_JHDJ01000143.1 Protein Homology CDS 34261 35658 . + 0 ID=cds-WP_000825775.1;Parent=gene-AD08_RS14795;Dbxref=Genbank:WP_000825775.1;Name=WP_000825775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=AD08_RS14795;product=YcjX family protein;protein_id=WP_000825775.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 35655 36716 . + . ID=gene-AD08_RS14790;Name=AD08_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14790;old_locus_tag=AD08_1556 NZ_JHDJ01000143.1 Protein Homology CDS 35655 36716 . + 0 ID=cds-WP_000138728.1;Parent=gene-AD08_RS14790;Dbxref=Genbank:WP_000138728.1;Name=WP_000138728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415838.1;locus_tag=AD08_RS14790;product=TIGR01620 family protein;protein_id=WP_000138728.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 36864 38405 . + . ID=gene-AD08_RS14785;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=AD08_RS14785;old_locus_tag=AD08_1557 NZ_JHDJ01000143.1 Protein Homology CDS 36864 38405 . + 0 ID=cds-WP_001300658.1;Parent=gene-AD08_RS14785;Dbxref=Genbank:WP_001300658.1;Name=WP_001300658.1;gbkey=CDS;gene=tyrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415839.1;locus_tag=AD08_RS14785;product=transcriptional regulator TyrR;protein_id=WP_001300658.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 38449 38955 . - . ID=gene-AD08_RS14780;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=AD08_RS14780;old_locus_tag=AD08_1558 NZ_JHDJ01000143.1 Protein Homology CDS 38449 38955 . - 0 ID=cds-WP_032218551.1;Parent=gene-AD08_RS14780;Dbxref=Genbank:WP_032218551.1;Name=WP_032218551.1;gbkey=CDS;gene=tpx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309930.1;locus_tag=AD08_RS14780;product=thiol peroxidase;protein_id=WP_032218551.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 39074 40039 . + . ID=gene-AD08_RS14775;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=AD08_RS14775;old_locus_tag=AD08_1559 NZ_JHDJ01000143.1 Protein Homology CDS 39074 40039 . + 0 ID=cds-WP_001261211.1;Parent=gene-AD08_RS14775;Dbxref=Genbank:WP_001261211.1;Name=WP_001261211.1;gbkey=CDS;gene=ycjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415841.4;locus_tag=AD08_RS14775;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001261211.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 40014 40742 . - . ID=gene-AD08_RS14770;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=AD08_RS14770;old_locus_tag=AD08_1560 NZ_JHDJ01000143.1 Protein Homology CDS 40014 40742 . - 0 ID=cds-WP_000219122.1;Parent=gene-AD08_RS14770;Dbxref=Genbank:WP_000219122.1;Name=WP_000219122.1;gbkey=CDS;gene=mpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415842.2;locus_tag=AD08_RS14770;product=murein tripeptide amidase MpaA;protein_id=WP_000219122.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq pseudogene 40869 41006 . - . ID=gene-AD08_RS14765;Name=AD08_RS14765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS14765;old_locus_tag=AD08_1561;partial=true;pseudo=true;start_range=.,40869 NZ_JHDJ01000143.1 Protein Homology CDS 40869 41006 . - 0 ID=cds-AD08_RS14765;Parent=gene-AD08_RS14765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707232.2;locus_tag=AD08_RS14765;partial=true;product=NAD-dependent dehydratase;pseudo=true;start_range=.,40869;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 41012 41077 . - . ID=gene-AD08_RS31665;Name=AD08_RS31665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31665 NZ_JHDJ01000143.1 Protein Homology CDS 41012 41077 . - 0 ID=cds-WP_120795383.1;Parent=gene-AD08_RS31665;Dbxref=Genbank:WP_120795383.1;Name=WP_120795383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518774.1;locus_tag=AD08_RS31665;product=uncharacterized protein YmjD;protein_id=WP_120795383.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 41077 41997 . - . ID=gene-AD08_RS14760;Name=AD08_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14760;old_locus_tag=AD08_1562 NZ_JHDJ01000143.1 Protein Homology CDS 41077 41997 . - 0 ID=cds-WP_001300523.1;Parent=gene-AD08_RS14760;Dbxref=Genbank:WP_001300523.1;Name=WP_001300523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415843.2;locus_tag=AD08_RS14760;product=alpha/beta hydrolase;protein_id=WP_001300523.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 42135 43034 . + . ID=gene-AD08_RS14755;Name=AD08_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14755;old_locus_tag=AD08_1563 NZ_JHDJ01000143.1 Protein Homology CDS 42135 43034 . + 0 ID=cds-WP_000817708.1;Parent=gene-AD08_RS14755;Dbxref=Genbank:WP_000817708.1;Name=WP_000817708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415844.1;locus_tag=AD08_RS14755;product=DNA-binding transcriptional regulator PgrR;protein_id=WP_000817708.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 43371 44984 . + . ID=gene-AD08_RS14750;Name=AD08_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14750;old_locus_tag=AD08_1564 NZ_JHDJ01000143.1 Protein Homology CDS 43371 44984 . + 0 ID=cds-WP_000683020.1;Parent=gene-AD08_RS14750;Dbxref=Genbank:WP_000683020.1;Name=WP_000683020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415845.2;locus_tag=AD08_RS14750;product=murein tripeptide ABC transporter substrate-binding protein MppA;protein_id=WP_000683020.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 45035 46066 . - . ID=gene-AD08_RS14745;Name=ynaI;gbkey=Gene;gene=ynaI;gene_biotype=protein_coding;locus_tag=AD08_RS14745;old_locus_tag=AD08_1565 NZ_JHDJ01000143.1 Protein Homology CDS 45035 46066 . - 0 ID=cds-WP_000559900.1;Parent=gene-AD08_RS14745;Dbxref=Genbank:WP_000559900.1;Name=WP_000559900.1;gbkey=CDS;gene=ynaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309939.1;locus_tag=AD08_RS14745;product=low conductance mechanosensitive channel YnaI;protein_id=WP_000559900.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 46310 46567 . + . ID=gene-AD08_RS14740;Name=AD08_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14740;old_locus_tag=AD08_1566 NZ_JHDJ01000143.1 Protein Homology CDS 46310 46567 . + 0 ID=cds-WP_000605090.1;Parent=gene-AD08_RS14740;Dbxref=Genbank:WP_000605090.1;Name=WP_000605090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309940.1;locus_tag=AD08_RS14740;product=DUF2534 family protein;protein_id=WP_000605090.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 46617 47567 . - . ID=gene-AD08_RS14735;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=AD08_RS14735;old_locus_tag=AD08_1567 NZ_JHDJ01000143.1 Protein Homology CDS 46617 47567 . - 0 ID=cds-WP_001262123.1;Parent=gene-AD08_RS14735;Dbxref=Genbank:WP_001262123.1;Name=WP_001262123.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309941.1;locus_tag=AD08_RS14735;product=universal stress protein UspE;protein_id=WP_001262123.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 47719 48471 . - . ID=gene-AD08_RS14730;Name=AD08_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14730;old_locus_tag=AD08_1568 NZ_JHDJ01000143.1 Protein Homology CDS 47719 48471 . - 0 ID=cds-WP_000611911.1;Parent=gene-AD08_RS14730;Dbxref=Genbank:WP_000611911.1;Name=WP_000611911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=AD08_RS14730;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611911.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 48666 49181 . - . ID=gene-AD08_RS14725;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=AD08_RS14725;old_locus_tag=AD08_1569 NZ_JHDJ01000143.1 Protein Homology CDS 48666 49181 . - 0 ID=cds-WP_000945011.1;Parent=gene-AD08_RS14725;Dbxref=Genbank:WP_000945011.1;Name=WP_000945011.1;gbkey=CDS;gene=ogt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415851.1;locus_tag=AD08_RS14725;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945011.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 49192 50718 . - . ID=gene-AD08_RS14720;Name=abgT;gbkey=Gene;gene=abgT;gene_biotype=protein_coding;locus_tag=AD08_RS14720;old_locus_tag=AD08_1570 NZ_JHDJ01000143.1 Protein Homology CDS 49192 50718 . - 0 ID=cds-WP_000062973.1;Parent=gene-AD08_RS14720;Dbxref=Genbank:WP_000062973.1;Name=WP_000062973.1;gbkey=CDS;gene=abgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415852.2;locus_tag=AD08_RS14720;product=p-aminobenzoyl-glutamate transporter;protein_id=WP_000062973.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 50755 52200 . - . ID=gene-AD08_RS14715;Name=AD08_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14715;old_locus_tag=AD08_1571 NZ_JHDJ01000143.1 Protein Homology CDS 50755 52200 . - 0 ID=cds-WP_001156451.1;Parent=gene-AD08_RS14715;Dbxref=Genbank:WP_001156451.1;Name=WP_001156451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415853.1;locus_tag=AD08_RS14715;product=p-aminobenzoyl-glutamate hydrolase subunit AbgB;protein_id=WP_001156451.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 52200 53510 . - . ID=gene-AD08_RS14710;Name=AD08_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14710;old_locus_tag=AD08_1572 NZ_JHDJ01000143.1 Protein Homology CDS 52200 53510 . - 0 ID=cds-WP_032218567.1;Parent=gene-AD08_RS14710;Dbxref=Genbank:WP_032218567.1;Name=WP_032218567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415854.4;locus_tag=AD08_RS14710;product=p-aminobenzoyl-glutamate hydrolase subunit AbgA;protein_id=WP_032218567.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 53686 54594 . + . ID=gene-AD08_RS14705;Name=AD08_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14705;old_locus_tag=AD08_1573 NZ_JHDJ01000143.1 Protein Homology CDS 53686 54594 . + 0 ID=cds-WP_001405121.1;Parent=gene-AD08_RS14705;Dbxref=Genbank:WP_001405121.1;Name=WP_001405121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309950.1;locus_tag=AD08_RS14705;product=LysR family transcriptional regulator;protein_id=WP_001405121.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 54924 55487 . + . ID=gene-AD08_RS14700;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=AD08_RS14700;old_locus_tag=AD08_1574 NZ_JHDJ01000143.1 Protein Homology CDS 54924 55487 . + 0 ID=cds-WP_001046829.1;Parent=gene-AD08_RS14700;Dbxref=Genbank:WP_001046829.1;Name=WP_001046829.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415856.1;locus_tag=AD08_RS14700;product=DNA endonuclease SmrA;protein_id=WP_001046829.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 55508 56740 . - . ID=gene-AD08_RS14695;Name=dgcM;gbkey=Gene;gene=dgcM;gene_biotype=protein_coding;locus_tag=AD08_RS14695;old_locus_tag=AD08_1575 NZ_JHDJ01000143.1 Protein Homology CDS 55508 56740 . - 0 ID=cds-WP_032218568.1;Parent=gene-AD08_RS14695;Dbxref=Genbank:WP_032218568.1;Name=WP_032218568.1;gbkey=CDS;gene=dgcM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415857.2;locus_tag=AD08_RS14695;product=diguanylate cyclase DgcM;protein_id=WP_032218568.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 56995 57978 . + . ID=gene-AD08_RS14690;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=AD08_RS14690;old_locus_tag=AD08_1576 NZ_JHDJ01000143.1 Protein Homology CDS 56995 57978 . + 0 ID=cds-WP_000387388.1;Parent=gene-AD08_RS14690;Dbxref=Genbank:WP_000387388.1;Name=WP_000387388.1;gbkey=CDS;gene=zntB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309953.1;locus_tag=AD08_RS14690;product=zinc transporter ZntB;protein_id=WP_000387388.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 58456 59829 . + . ID=gene-AD08_RS14685;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=AD08_RS14685;old_locus_tag=AD08_1577 NZ_JHDJ01000143.1 Protein Homology CDS 58456 59829 . + 0 ID=cds-WP_000123737.1;Parent=gene-AD08_RS14685;Dbxref=Genbank:WP_000123737.1;Name=WP_000123737.1;gbkey=CDS;gene=dbpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415859.1;locus_tag=AD08_RS14685;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123737.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 59958 60893 . - . ID=gene-AD08_RS14680;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=AD08_RS14680;old_locus_tag=AD08_1578 NZ_JHDJ01000143.1 Protein Homology CDS 59958 60893 . - 0 ID=cds-WP_000081417.1;Parent=gene-AD08_RS14680;Dbxref=Genbank:WP_000081417.1;Name=WP_000081417.1;gbkey=CDS;gene=ttcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415860.1;locus_tag=AD08_RS14680;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_000081417.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 61070 61504 . - . ID=gene-AD08_RS14675;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=AD08_RS14675;old_locus_tag=AD08_1579 NZ_JHDJ01000143.1 Protein Homology CDS 61070 61504 . - 0 ID=cds-WP_001300461.1;Parent=gene-AD08_RS14675;Dbxref=Genbank:WP_001300461.1;Name=WP_001300461.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415894.4;locus_tag=AD08_RS14675;product=universal stress protein UspF;protein_id=WP_001300461.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 61645 62778 . - . ID=gene-AD08_RS14670;Name=ompN;gbkey=Gene;gene=ompN;gene_biotype=protein_coding;locus_tag=AD08_RS14670;old_locus_tag=AD08_1580 NZ_JHDJ01000143.1 Protein Homology CDS 61645 62778 . - 0 ID=cds-WP_000837921.1;Parent=gene-AD08_RS14670;Dbxref=Genbank:WP_000837921.1;Name=WP_000837921.1;gbkey=CDS;gene=ompN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415895.1;locus_tag=AD08_RS14670;product=porin OmpN;protein_id=WP_000837921.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 63145 66669 . - . ID=gene-AD08_RS14665;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=AD08_RS14665;old_locus_tag=AD08_1581 NZ_JHDJ01000143.1 Protein Homology CDS 63145 66669 . - 0 ID=cds-WP_032218572.1;Parent=gene-AD08_RS14665;Dbxref=Genbank:WP_032218572.1;Name=WP_032218572.1;gbkey=CDS;gene=nifJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415896.1;locus_tag=AD08_RS14665;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_032218572.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 66943 67209 . + . ID=gene-AD08_RS14660;Name=AD08_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14660;old_locus_tag=AD08_1583 NZ_JHDJ01000143.1 Protein Homology CDS 66943 67209 . + 0 ID=cds-WP_001295715.1;Parent=gene-AD08_RS14660;Dbxref=Genbank:WP_001295715.1;Name=WP_001295715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964583.1;locus_tag=AD08_RS14660;product=DUF333 domain-containing protein;protein_id=WP_001295715.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 67206 67628 . - . ID=gene-AD08_RS14655;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=AD08_RS14655;old_locus_tag=AD08_1584 NZ_JHDJ01000143.1 Protein Homology CDS 67206 67628 . - 0 ID=cds-WP_001298828.1;Parent=gene-AD08_RS14655;Dbxref=Genbank:WP_001298828.1;Name=WP_001298828.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415897.1;locus_tag=AD08_RS14655;product=heat shock protein HslJ;protein_id=WP_001298828.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 67739 68728 . - . ID=gene-AD08_RS14650;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=AD08_RS14650;old_locus_tag=AD08_1585 NZ_JHDJ01000143.1 Protein Homology CDS 67739 68728 . - 0 ID=cds-WP_000762236.1;Parent=gene-AD08_RS14650;Dbxref=Genbank:WP_000762236.1;Name=WP_000762236.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415898.1;locus_tag=AD08_RS14650;product=D-lactate dehydrogenase;protein_id=WP_000762236.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 68936 71575 . + . ID=gene-AD08_RS14645;Name=AD08_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14645;old_locus_tag=AD08_1586 NZ_JHDJ01000143.1 Protein Homology CDS 68936 71575 . + 0 ID=cds-WP_000900941.1;Parent=gene-AD08_RS14645;Dbxref=Genbank:WP_000900941.1;Name=WP_000900941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415899.1;locus_tag=AD08_RS14645;product=YdbH family protein;protein_id=WP_000900941.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 71572 71757 . + . ID=gene-AD08_RS14640;Name=AD08_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14640;old_locus_tag=AD08_1587 NZ_JHDJ01000143.1 Protein Homology CDS 71572 71757 . + 0 ID=cds-WP_000698145.1;Parent=gene-AD08_RS14640;Dbxref=Genbank:WP_000698145.1;Name=WP_000698145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415900.1;locus_tag=AD08_RS14640;product=YnbE family lipoprotein;protein_id=WP_000698145.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 71765 72091 . + . ID=gene-AD08_RS14635;Name=AD08_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14635;old_locus_tag=AD08_1588 NZ_JHDJ01000143.1 Protein Homology CDS 71765 72091 . + 0 ID=cds-WP_001300734.1;Parent=gene-AD08_RS14635;Dbxref=Genbank:WP_001300734.1;Name=WP_001300734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415901.2;locus_tag=AD08_RS14635;product=YdbL family protein;protein_id=WP_001300734.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 72263 73168 . - . ID=gene-AD08_RS14630;Name=feaR;gbkey=Gene;gene=feaR;gene_biotype=protein_coding;locus_tag=AD08_RS14630;old_locus_tag=AD08_1589 NZ_JHDJ01000143.1 Protein Homology CDS 72263 73168 . - 0 ID=cds-WP_001067519.1;Parent=gene-AD08_RS14630;Dbxref=Genbank:WP_001067519.1;Name=WP_001067519.1;gbkey=CDS;gene=feaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415902.1;locus_tag=AD08_RS14630;product=transcriptional regulator FeaR;protein_id=WP_001067519.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 73404 74903 . + . ID=gene-AD08_RS14625;Name=AD08_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14625;old_locus_tag=AD08_1590 NZ_JHDJ01000143.1 Protein Homology CDS 73404 74903 . + 0 ID=cds-WP_000138615.1;Parent=gene-AD08_RS14625;Dbxref=Genbank:WP_000138615.1;Name=WP_000138615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415903.4;locus_tag=AD08_RS14625;product=phenylacetaldehyde dehydrogenase;protein_id=WP_000138615.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 74961 76283 . - . ID=gene-AD08_RS31115;Name=AD08_RS31115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31115;old_locus_tag=AD08_1591 NZ_JHDJ01000143.1 Protein Homology CDS 74961 76283 . - 0 ID=cds-WP_097475565.1;Parent=gene-AD08_RS31115;Dbxref=Genbank:WP_097475565.1;Name=WP_097475565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001439921.1;locus_tag=AD08_RS31115;product=copper amine oxidase;protein_id=WP_097475565.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 76295 77233 . - . ID=gene-AD08_RS31120;Name=AD08_RS31120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31120;old_locus_tag=AD08_1592 NZ_JHDJ01000143.1 Protein Homology CDS 76295 77233 . - 0 ID=cds-WP_001365853.1;Parent=gene-AD08_RS31120;Dbxref=Genbank:WP_001365853.1;Name=WP_001365853.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014748.1;locus_tag=AD08_RS31120;product=copper amine oxidase;protein_id=WP_001365853.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 77481 79526 . - . ID=gene-AD08_RS14620;Name=paaZ;gbkey=Gene;gene=paaZ;gene_biotype=protein_coding;locus_tag=AD08_RS14620;old_locus_tag=AD08_1594 NZ_JHDJ01000143.1 Protein Homology CDS 77481 79526 . - 0 ID=cds-WP_001186469.1;Parent=gene-AD08_RS14620;Dbxref=Genbank:WP_001186469.1;Name=WP_001186469.1;gbkey=CDS;gene=paaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415905.1;locus_tag=AD08_RS14620;product=phenylacetic acid degradation bifunctional protein PaaZ;protein_id=WP_001186469.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 79811 80740 . + . ID=gene-AD08_RS14615;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=AD08_RS14615;old_locus_tag=AD08_1595 NZ_JHDJ01000143.1 Protein Homology CDS 79811 80740 . + 0 ID=cds-WP_000191077.1;Parent=gene-AD08_RS14615;Dbxref=Genbank:WP_000191077.1;Name=WP_000191077.1;gbkey=CDS;gene=paaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415906.1;locus_tag=AD08_RS14615;product=1%2C2-phenylacetyl-CoA epoxidase subunit A;protein_id=WP_000191077.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 80752 81039 . + . ID=gene-AD08_RS14610;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=AD08_RS14610;old_locus_tag=AD08_1596 NZ_JHDJ01000143.1 Protein Homology CDS 80752 81039 . + 0 ID=cds-WP_000073393.1;Parent=gene-AD08_RS14610;Dbxref=Genbank:WP_000073393.1;Name=WP_000073393.1;gbkey=CDS;gene=paaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415907.1;locus_tag=AD08_RS14610;product=1%2C2-phenylacetyl-CoA epoxidase subunit B;protein_id=WP_000073393.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 81048 81794 . + . ID=gene-AD08_RS14605;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=AD08_RS14605;old_locus_tag=AD08_1597 NZ_JHDJ01000143.1 Protein Homology CDS 81048 81794 . + 0 ID=cds-WP_001072837.1;Parent=gene-AD08_RS14605;Dbxref=Genbank:WP_001072837.1;Name=WP_001072837.1;gbkey=CDS;gene=paaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415908.1;locus_tag=AD08_RS14605;product=phenylacetate-CoA oxygenase subunit PaaC;protein_id=WP_001072837.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 81809 82306 . + . ID=gene-AD08_RS14600;Name=paaD;gbkey=Gene;gene=paaD;gene_biotype=protein_coding;locus_tag=AD08_RS14600;old_locus_tag=AD08_1598 NZ_JHDJ01000143.1 Protein Homology CDS 81809 82306 . + 0 ID=cds-WP_001189201.1;Parent=gene-AD08_RS14600;Dbxref=Genbank:WP_001189201.1;Name=WP_001189201.1;gbkey=CDS;gene=paaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415909.4;locus_tag=AD08_RS14600;product=phenylacetate degradation protein PaaD;protein_id=WP_001189201.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 82314 83384 . + . ID=gene-AD08_RS14595;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=AD08_RS14595;old_locus_tag=AD08_1599 NZ_JHDJ01000143.1 Protein Homology CDS 82314 83384 . + 0 ID=cds-WP_000206388.1;Parent=gene-AD08_RS14595;Dbxref=Genbank:WP_000206388.1;Name=WP_000206388.1;gbkey=CDS;gene=paaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415910.1;locus_tag=AD08_RS14595;product=phenylacetate-CoA oxygenase/reductase subunit PaaK;protein_id=WP_000206388.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 83381 84148 . + . ID=gene-AD08_RS14590;Name=AD08_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14590;old_locus_tag=AD08_1600 NZ_JHDJ01000143.1 Protein Homology CDS 83381 84148 . + 0 ID=cds-WP_001292353.1;Parent=gene-AD08_RS14590;Dbxref=Genbank:WP_001292353.1;Name=WP_001292353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415911.1;locus_tag=AD08_RS14590;product=2%2C3-dehydroadipyl-CoA hydratase;protein_id=WP_001292353.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 84148 84936 . + . ID=gene-AD08_RS14585;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=AD08_RS14585;old_locus_tag=AD08_1601 NZ_JHDJ01000143.1 Protein Homology CDS 84148 84936 . + 0 ID=cds-WP_000969784.1;Parent=gene-AD08_RS14585;Dbxref=Genbank:WP_000969784.1;Name=WP_000969784.1;gbkey=CDS;gene=paaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415912.1;locus_tag=AD08_RS14585;product=2-(1%2C2-epoxy-1%2C2-dihydrophenyl)acetyl-CoA isomerase;protein_id=WP_000969784.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 84938 86365 . + . ID=gene-AD08_RS14580;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=AD08_RS14580;old_locus_tag=AD08_1602 NZ_JHDJ01000143.1 Protein Homology CDS 84938 86365 . + 0 ID=cds-WP_032218579.1;Parent=gene-AD08_RS14580;Dbxref=Genbank:WP_032218579.1;Name=WP_032218579.1;gbkey=CDS;gene=paaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415913.1;locus_tag=AD08_RS14580;product=3-hydroxyacyl-CoA dehydrogenase PaaC;protein_id=WP_032218579.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 86355 86777 . + . ID=gene-AD08_RS14575;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;locus_tag=AD08_RS14575;old_locus_tag=AD08_1603 NZ_JHDJ01000143.1 Protein Homology CDS 86355 86777 . + 0 ID=cds-WP_000018413.1;Parent=gene-AD08_RS14575;Dbxref=Genbank:WP_000018413.1;Name=WP_000018413.1;gbkey=CDS;gene=paaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415914.1;locus_tag=AD08_RS14575;product=hydroxyphenylacetyl-CoA thioesterase PaaI;protein_id=WP_000018413.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 86777 87982 . + . ID=gene-AD08_RS14570;Name=AD08_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14570;old_locus_tag=AD08_1604 NZ_JHDJ01000143.1 Protein Homology CDS 86777 87982 . + 0 ID=cds-WP_001206197.1;Parent=gene-AD08_RS14570;Dbxref=Genbank:WP_001206197.1;Name=WP_001206197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415915.1;locus_tag=AD08_RS14570;product=3-oxoadipyl-CoA thiolase;protein_id=WP_001206197.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 88009 89322 . + . ID=gene-AD08_RS14565;Name=paaF;gbkey=Gene;gene=paaF;gene_biotype=protein_coding;locus_tag=AD08_RS14565;old_locus_tag=AD08_1605 NZ_JHDJ01000143.1 Protein Homology CDS 88009 89322 . + 0 ID=cds-WP_000632280.1;Parent=gene-AD08_RS14565;Dbxref=Genbank:WP_000632280.1;Name=WP_000632280.1;gbkey=CDS;gene=paaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415916.1;locus_tag=AD08_RS14565;product=phenylacetate--CoA ligase;protein_id=WP_000632280.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 89423 90373 . + . ID=gene-AD08_RS14560;Name=paaX;gbkey=Gene;gene=paaX;gene_biotype=protein_coding;locus_tag=AD08_RS14560;old_locus_tag=AD08_1606 NZ_JHDJ01000143.1 Protein Homology CDS 89423 90373 . + 0 ID=cds-WP_000039887.1;Parent=gene-AD08_RS14560;Dbxref=Genbank:WP_000039887.1;Name=WP_000039887.1;gbkey=CDS;gene=paaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415917.1;locus_tag=AD08_RS14560;product=phenylacetic acid degradation operon negative regulatory protein PaaX;protein_id=WP_000039887.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 90355 90945 . + . ID=gene-AD08_RS14555;Name=paaY;gbkey=Gene;gene=paaY;gene_biotype=protein_coding;locus_tag=AD08_RS14555;old_locus_tag=AD08_1607 NZ_JHDJ01000143.1 Protein Homology CDS 90355 90945 . + 0 ID=cds-WP_001123464.1;Parent=gene-AD08_RS14555;Dbxref=Genbank:WP_001123464.1;Name=WP_001123464.1;gbkey=CDS;gene=paaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415918.1;locus_tag=AD08_RS14555;product=phenylacetic acid degradation protein PaaY;protein_id=WP_001123464.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 91049 91114 . - . ID=gene-AD08_RS31125;Name=AD08_RS31125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31125 NZ_JHDJ01000143.1 Protein Homology CDS 91049 91114 . - 0 ID=cds-WP_010723099.1;Parent=gene-AD08_RS31125;Dbxref=Genbank:WP_010723099.1;Name=WP_010723099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791240.1;locus_tag=AD08_RS31125;product=hypothetical protein;protein_id=WP_010723099.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq pseudogene 91276 93408 . + . ID=gene-AD08_RS14550;Name=AD08_RS14550;end_range=93408,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS14550;old_locus_tag=AD08_1608;partial=true;pseudo=true NZ_JHDJ01000143.1 Protein Homology CDS 91276 93408 . + 0 ID=cds-AD08_RS14550;Parent=gene-AD08_RS14550;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=93408,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001335741.1;locus_tag=AD08_RS14550;partial=true;product=autotransporter domain-containing protein;pseudo=true;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 93418 94691 . - . ID=gene-AD08_RS14545;Name=AD08_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14545;old_locus_tag=AD08_1609 NZ_JHDJ01000143.1 Protein Homology CDS 94331 94691 . - 0 ID=cds-WP_113706216.1;Parent=gene-AD08_RS14545;Dbxref=Genbank:WP_113706216.1;Name=WP_113706216.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611435.1;locus_tag=AD08_RS14545;product=IS3-like element IS2 family transposase;protein_id=WP_113706216.1;transl_table=11 NZ_JHDJ01000143.1 Protein Homology CDS 93418 94331 . - 2 ID=cds-WP_113706216.1;Parent=gene-AD08_RS14545;Dbxref=Genbank:WP_113706216.1;Name=WP_113706216.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611435.1;locus_tag=AD08_RS14545;product=IS3-like element IS2 family transposase;protein_id=WP_113706216.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 96263 98674 . + . ID=gene-AD08_RS28685;Name=AD08_RS28685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS28685;old_locus_tag=AD08_1611 NZ_JHDJ01000143.1 Protein Homology CDS 96263 98674 . + 0 ID=cds-WP_032313496.1;Parent=gene-AD08_RS28685;Dbxref=Genbank:WP_032313496.1;Name=WP_032313496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310034.2;locus_tag=AD08_RS28685;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_032313496.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 98882 99742 . + . ID=gene-AD08_RS14530;Name=pdxI;gbkey=Gene;gene=pdxI;gene_biotype=protein_coding;locus_tag=AD08_RS14530;old_locus_tag=AD08_1613 NZ_JHDJ01000143.1 Protein Homology CDS 98882 99742 . + 0 ID=cds-WP_000097801.1;Parent=gene-AD08_RS14530;Dbxref=Genbank:WP_000097801.1;Name=WP_000097801.1;gbkey=CDS;gene=pdxI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415924.1;locus_tag=AD08_RS14530;product=pyridoxine 4-dehydrogenase;protein_id=WP_000097801.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq pseudogene 99805 101701 . + . ID=gene-AD08_RS0125690;Name=AD08_RS0125690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125690;pseudo=true NZ_JHDJ01000143.1 Protein Homology CDS 99805 101701 . + 0 ID=cds-AD08_RS0125690;Parent=gene-AD08_RS0125690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415925.2;locus_tag=AD08_RS0125690;product=DUF2773 domain-containing bactofilin;pseudo=true;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 101872 102477 . + . ID=gene-AD08_RS14525;Name=AD08_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14525;old_locus_tag=AD08_1616 NZ_JHDJ01000143.1 Protein Homology CDS 101872 102477 . + 0 ID=cds-WP_000177515.1;Parent=gene-AD08_RS14525;Dbxref=Genbank:WP_000177515.1;Name=WP_000177515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415926.4;locus_tag=AD08_RS14525;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_000177515.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 102477 103373 . + . ID=gene-AD08_RS14520;Name=AD08_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14520;old_locus_tag=AD08_1617 NZ_JHDJ01000143.1 Protein Homology CDS 102477 103373 . + 0 ID=cds-WP_000890941.1;Parent=gene-AD08_RS14520;Dbxref=Genbank:WP_000890941.1;Name=WP_000890941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415927.1;locus_tag=AD08_RS14520;product=phosphatidate cytidylyltransferase;protein_id=WP_000890941.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 103389 105146 . + . ID=gene-AD08_RS14515;Name=AD08_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14515;old_locus_tag=AD08_1618 NZ_JHDJ01000143.1 Protein Homology CDS 103389 105146 . + 0 ID=cds-WP_000431845.1;Parent=gene-AD08_RS14515;Dbxref=Genbank:WP_000431845.1;Name=WP_000431845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415928.1;locus_tag=AD08_RS14515;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_000431845.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 105136 106452 . + . ID=gene-AD08_RS14510;Name=AD08_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14510;old_locus_tag=AD08_1619 NZ_JHDJ01000143.1 Protein Homology CDS 105136 106452 . + 0 ID=cds-WP_000627368.1;Parent=gene-AD08_RS14510;Dbxref=Genbank:WP_000627368.1;Name=WP_000627368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310040.2;locus_tag=AD08_RS14510;product=phosphatase PAP2/dual specificity phosphatase family protein;protein_id=WP_000627368.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 106506 107111 . - . ID=gene-AD08_RS14505;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=AD08_RS14505;old_locus_tag=AD08_1620 NZ_JHDJ01000143.1 Protein Homology CDS 106506 107111 . - 0 ID=cds-WP_000048950.1;Parent=gene-AD08_RS14505;Dbxref=Genbank:WP_000048950.1;Name=WP_000048950.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415930.1;locus_tag=AD08_RS14505;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048950.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 107312 111214 . + . ID=gene-AD08_RS14500;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=AD08_RS14500;old_locus_tag=AD08_1621 NZ_JHDJ01000143.1 Protein Homology CDS 107312 111214 . + 0 ID=cds-WP_000139543.1;Parent=gene-AD08_RS14500;Dbxref=Genbank:WP_000139543.1;Name=WP_000139543.1;gbkey=CDS;gene=hrpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415931.4;locus_tag=AD08_RS14500;product=ATP-dependent RNA helicase HrpA;protein_id=WP_000139543.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 111486 112286 . + . ID=gene-AD08_RS14495;Name=AD08_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14495;old_locus_tag=AD08_1622 NZ_JHDJ01000143.1 Protein Homology CDS 111486 112286 . + 0 ID=cds-WP_001027942.1;Parent=gene-AD08_RS14495;Dbxref=Genbank:WP_001027942.1;Name=WP_001027942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415932.1;locus_tag=AD08_RS14495;product=YdcF family protein;protein_id=WP_001027942.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 112483 113922 . + . ID=gene-AD08_RS14490;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=AD08_RS14490;old_locus_tag=AD08_1623 NZ_JHDJ01000143.1 Protein Homology CDS 112483 113922 . + 0 ID=cds-WP_032218586.1;Parent=gene-AD08_RS14490;Dbxref=Genbank:WP_032218586.1;Name=WP_032218586.1;gbkey=CDS;gene=aldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415933.1;locus_tag=AD08_RS14490;product=aldehyde dehydrogenase;protein_id=WP_032218586.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq pseudogene 113964 114964 . - . ID=gene-AD08_RS31670;Name=gap;gbkey=Gene;gene=gap;gene_biotype=pseudogene;locus_tag=AD08_RS31670;pseudo=true NZ_JHDJ01000143.1 Protein Homology CDS 113964 114964 . - 0 ID=cds-AD08_RS31670;Parent=gene-AD08_RS31670;Note=frameshifted%3B internal stop;gbkey=CDS;gene=gap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310049.1;locus_tag=AD08_RS31670;product=type I glyceraldehyde-3-phosphate dehydrogenase;pseudo=true;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 115153 115683 . + . ID=gene-AD08_RS14470;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=AD08_RS14470;old_locus_tag=AD08_1627 NZ_JHDJ01000143.1 Protein Homology CDS 115153 115683 . + 0 ID=cds-WP_001394236.1;Parent=gene-AD08_RS14470;Dbxref=Genbank:WP_001394236.1;Name=WP_001394236.1;gbkey=CDS;gene=cybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415935.2;locus_tag=AD08_RS14470;product=cytochrome b561;protein_id=WP_001394236.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 115928 116101 . + . ID=gene-AD08_RS14465;Name=AD08_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14465;old_locus_tag=AD08_1628 NZ_JHDJ01000143.1 Protein Homology CDS 115928 116101 . + 0 ID=cds-WP_000731833.1;Parent=gene-AD08_RS14465;Dbxref=Genbank:WP_000731833.1;Name=WP_000731833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415936.1;locus_tag=AD08_RS14465;product=periplasmic protein;protein_id=WP_000731833.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 116173 116322 . - . ID=gene-AD08_RS0125695;Name=hokB;gbkey=Gene;gene=hokB;gene_biotype=protein_coding;locus_tag=AD08_RS0125695 NZ_JHDJ01000143.1 Protein Homology CDS 116173 116322 . - 0 ID=cds-WP_001320773.1;Parent=gene-AD08_RS0125695;Dbxref=Genbank:WP_001320773.1;Name=WP_001320773.1;gbkey=CDS;gene=hokB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025301.1;locus_tag=AD08_RS0125695;product=type I toxin-antitoxin system toxin HokB;protein_id=WP_001320773.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 116721 118361 . + . ID=gene-AD08_RS14460;Name=trg;gbkey=Gene;gene=trg;gene_biotype=protein_coding;locus_tag=AD08_RS14460;old_locus_tag=AD08_1629 NZ_JHDJ01000143.1 Protein Homology CDS 116721 118361 . + 0 ID=cds-WP_001098559.1;Parent=gene-AD08_RS14460;Dbxref=Genbank:WP_001098559.1;Name=WP_001098559.1;gbkey=CDS;gene=trg;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415938.1;locus_tag=AD08_RS14460;product=methyl-accepting chemotaxis protein Trg;protein_id=WP_001098559.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 118399 119322 . - . ID=gene-AD08_RS14455;Name=AD08_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14455;old_locus_tag=AD08_1630 NZ_JHDJ01000143.1 Protein Homology CDS 118399 119322 . - 0 ID=cds-WP_000414567.1;Parent=gene-AD08_RS14455;Dbxref=Genbank:WP_000414567.1;Name=WP_000414567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415939.2;locus_tag=AD08_RS14455;product=LysR family transcriptional regulator;protein_id=WP_000414567.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 119539 120882 . + . ID=gene-AD08_RS14450;Name=AD08_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14450;old_locus_tag=AD08_1631 NZ_JHDJ01000143.1 Protein Homology CDS 119539 120882 . + 0 ID=cds-WP_000013789.1;Parent=gene-AD08_RS14450;Dbxref=Genbank:WP_000013789.1;Name=WP_000013789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415940.1;locus_tag=AD08_RS14450;product=VOC family protein;protein_id=WP_000013789.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 121107 122762 . + . ID=gene-AD08_RS14445;Name=AD08_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14445;old_locus_tag=AD08_1632 NZ_JHDJ01000143.1 Protein Homology CDS 121107 122762 . + 0 ID=cds-WP_000375961.1;Parent=gene-AD08_RS14445;Dbxref=Genbank:WP_000375961.1;Name=WP_000375961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415941.5;locus_tag=AD08_RS14445;product=glucan biosynthesis protein OpgD;protein_id=WP_000375961.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 122902 123126 . + . ID=gene-AD08_RS14440;Name=AD08_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14440;old_locus_tag=AD08_1633 NZ_JHDJ01000143.1 Protein Homology CDS 122902 123126 . + 0 ID=cds-WP_001296778.1;Parent=gene-AD08_RS14440;Dbxref=Genbank:WP_001296778.1;Name=WP_001296778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415943.4;locus_tag=AD08_RS14440;product=YdcH family protein;protein_id=WP_001296778.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 123189 123728 . + . ID=gene-AD08_RS14435;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=AD08_RS14435;old_locus_tag=AD08_1634 NZ_JHDJ01000143.1 Protein Homology CDS 123189 123728 . + 0 ID=cds-WP_000140873.1;Parent=gene-AD08_RS14435;Dbxref=Genbank:WP_000140873.1;Name=WP_000140873.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415944.1;locus_tag=AD08_RS14435;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000140873.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 123720 124700 . - . ID=gene-AD08_RS14430;Name=AD08_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14430;old_locus_tag=AD08_1635 NZ_JHDJ01000143.1 Protein Homology CDS 123720 124700 . - 0 ID=cds-WP_001234042.1;Parent=gene-AD08_RS14430;Dbxref=Genbank:WP_001234042.1;Name=WP_001234042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415945.1;locus_tag=AD08_RS14430;product=hypothetical protein;protein_id=WP_001234042.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 124824 125816 . + . ID=gene-AD08_RS14425;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=AD08_RS14425;old_locus_tag=AD08_1636 NZ_JHDJ01000143.1 Protein Homology CDS 124824 125816 . + 0 ID=cds-WP_032218588.1;Parent=gene-AD08_RS14425;Dbxref=Genbank:WP_032218588.1;Name=WP_032218588.1;gbkey=CDS;gene=tehA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415946.1;locus_tag=AD08_RS14425;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_032218588.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 125813 126406 . + . ID=gene-AD08_RS14420;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=AD08_RS14420;old_locus_tag=AD08_1637 NZ_JHDJ01000143.1 Protein Homology CDS 125813 126406 . + 0 ID=cds-WP_000586732.1;Parent=gene-AD08_RS14420;Dbxref=Genbank:WP_000586732.1;Name=WP_000586732.1;gbkey=CDS;gene=tehB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415947.1;locus_tag=AD08_RS14420;product=tellurite resistance methyltransferase TehB;protein_id=WP_000586732.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 126708 127376 . + . ID=gene-AD08_RS14415;Name=AD08_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14415;old_locus_tag=AD08_1639 NZ_JHDJ01000143.1 Protein Homology CDS 126708 127376 . + 0 ID=cds-WP_001261013.1;Parent=gene-AD08_RS14415;Dbxref=Genbank:WP_001261013.1;Name=WP_001261013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310063.1;locus_tag=AD08_RS14415;product=DUF3313 domain-containing protein;protein_id=WP_001261013.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq pseudogene 127394 127900 . - . ID=gene-AD08_RS28700;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=AD08_RS28700;pseudo=true NZ_JHDJ01000143.1 Protein Homology CDS 127394 127900 . - 0 ID=cds-AD08_RS28700;Parent=gene-AD08_RS28700;Note=internal stop;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000604919.1;locus_tag=AD08_RS28700;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 127908 129116 . + . ID=gene-AD08_RS14405;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AD08_RS14405;old_locus_tag=AD08_1643 NZ_JHDJ01000143.1 Protein Homology CDS 127908 129116 . + 0 ID=cds-WP_000826416.1;Parent=gene-AD08_RS14405;Dbxref=Genbank:WP_000826416.1;Name=WP_000826416.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001458895.1;locus_tag=AD08_RS14405;product=IS200/IS605 family element transposase accessory protein TnpB;protein_id=WP_000826416.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 129156 130370 . - . ID=gene-AD08_RS14400;Name=ydcO;gbkey=Gene;gene=ydcO;gene_biotype=protein_coding;locus_tag=AD08_RS14400;old_locus_tag=AD08_1644 NZ_JHDJ01000143.1 Protein Homology CDS 129156 130370 . - 0 ID=cds-WP_001326689.1;Parent=gene-AD08_RS14400;Dbxref=Genbank:WP_001326689.1;Name=WP_001326689.1;gbkey=CDS;gene=ydcO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748359.1;locus_tag=AD08_RS14400;product=BenE family transporter YdcO;protein_id=WP_001326689.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 130423 130959 . + . ID=gene-AD08_RS14395;Name=AD08_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14395;old_locus_tag=AD08_1645 NZ_JHDJ01000143.1 Protein Homology CDS 130423 130959 . + 0 ID=cds-WP_000429155.1;Parent=gene-AD08_RS14395;Dbxref=Genbank:WP_000429155.1;Name=WP_000429155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415951.1;locus_tag=AD08_RS14395;product=DNA-binding transcriptional regulator SutR;protein_id=WP_000429155.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 131032 132993 . + . ID=gene-AD08_RS14390;Name=rlhA;gbkey=Gene;gene=rlhA;gene_biotype=protein_coding;locus_tag=AD08_RS14390;old_locus_tag=AD08_1646 NZ_JHDJ01000143.1 Protein Homology CDS 131032 132993 . + 0 ID=cds-WP_001463389.1;Parent=gene-AD08_RS14390;Dbxref=Genbank:WP_001463389.1;Name=WP_001463389.1;gbkey=CDS;gene=rlhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415952.2;locus_tag=AD08_RS14390;product=23S rRNA 5-hydroxycytidine C2501 synthase;protein_id=WP_001463389.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 133085 133315 . - . ID=gene-AD08_RS14385;Name=AD08_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14385;old_locus_tag=AD08_1647 NZ_JHDJ01000143.1 Protein Homology CDS 133085 133315 . - 0 ID=cds-WP_000494244.1;Parent=gene-AD08_RS14385;Dbxref=Genbank:WP_000494244.1;Name=WP_000494244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415953.1;locus_tag=AD08_RS14385;product=YncJ family protein;protein_id=WP_000494244.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 133537 133713 . + . ID=gene-AD08_RS0125710;Name=hicA;gbkey=Gene;gene=hicA;gene_biotype=protein_coding;locus_tag=AD08_RS0125710 NZ_JHDJ01000143.1 Protein Homology CDS 133537 133713 . + 0 ID=cds-WP_000813794.1;Parent=gene-AD08_RS0125710;Dbxref=Genbank:WP_000813794.1;Name=WP_000813794.1;gbkey=CDS;gene=hicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415954.2;locus_tag=AD08_RS0125710;product=type II toxin-antitoxin system mRNA interferase toxin HicA;protein_id=WP_000813794.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 133759 134175 . + . ID=gene-AD08_RS14380;Name=hicB;gbkey=Gene;gene=hicB;gene_biotype=protein_coding;locus_tag=AD08_RS14380;old_locus_tag=AD08_1649 NZ_JHDJ01000143.1 Protein Homology CDS 133759 134175 . + 0 ID=cds-WP_001270286.1;Parent=gene-AD08_RS14380;Dbxref=Genbank:WP_001270286.1;Name=WP_001270286.1;gbkey=CDS;gene=hicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415955.2;locus_tag=AD08_RS14380;product=type II toxin-antitoxin system antitoxin HicB;protein_id=WP_001270286.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 134254 135660 . + . ID=gene-AD08_RS14375;Name=AD08_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14375;old_locus_tag=AD08_1650 NZ_JHDJ01000143.1 Protein Homology CDS 134254 135660 . + 0 ID=cds-WP_001413130.1;Parent=gene-AD08_RS14375;Dbxref=Genbank:WP_001413130.1;Name=WP_001413130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415956.1;locus_tag=AD08_RS14375;product=PLP-dependent aminotransferase family protein;protein_id=WP_001413130.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 135905 137050 . + . ID=gene-AD08_RS14370;Name=AD08_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14370;old_locus_tag=AD08_1651 NZ_JHDJ01000143.1 Protein Homology CDS 135905 137050 . + 0 ID=cds-WP_001416309.1;Parent=gene-AD08_RS14370;Dbxref=Genbank:WP_001416309.1;Name=WP_001416309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126748.1;locus_tag=AD08_RS14370;product=ABC transporter substrate-binding protein;protein_id=WP_001416309.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 137068 138081 . + . ID=gene-AD08_RS14365;Name=AD08_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14365;old_locus_tag=AD08_1652 NZ_JHDJ01000143.1 Protein Homology CDS 137068 138081 . + 0 ID=cds-WP_000220396.1;Parent=gene-AD08_RS14365;Dbxref=Genbank:WP_000220396.1;Name=WP_000220396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415958.1;locus_tag=AD08_RS14365;product=ABC transporter ATP-binding protein;protein_id=WP_000220396.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 138082 139023 . + . ID=gene-AD08_RS14360;Name=AD08_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14360;old_locus_tag=AD08_1653 NZ_JHDJ01000143.1 Protein Homology CDS 138082 139023 . + 0 ID=cds-WP_032218591.1;Parent=gene-AD08_RS14360;Dbxref=Genbank:WP_032218591.1;Name=WP_032218591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415959.1;locus_tag=AD08_RS14360;product=ABC transporter permease;protein_id=WP_032218591.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 139013 139807 . + . ID=gene-AD08_RS14355;Name=AD08_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14355;old_locus_tag=AD08_1654 NZ_JHDJ01000143.1 Protein Homology CDS 139013 139807 . + 0 ID=cds-WP_032218592.1;Parent=gene-AD08_RS14355;Dbxref=Genbank:WP_032218592.1;Name=WP_032218592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415960.1;locus_tag=AD08_RS14355;product=ABC transporter permease;protein_id=WP_032218592.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 139829 141253 . + . ID=gene-AD08_RS14350;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=AD08_RS14350;old_locus_tag=AD08_1655 NZ_JHDJ01000143.1 Protein Homology CDS 139829 141253 . + 0 ID=cds-WP_001163875.1;Parent=gene-AD08_RS14350;Dbxref=Genbank:WP_001163875.1;Name=WP_001163875.1;gbkey=CDS;gene=patD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415961.1;locus_tag=AD08_RS14350;product=aminobutyraldehyde dehydrogenase;protein_id=WP_001163875.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 141350 141445 . - . ID=gene-AD08_RS28705;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=AD08_RS28705 NZ_JHDJ01000143.1 Protein Homology CDS 141350 141445 . - 0 ID=cds-WP_001310798.1;Parent=gene-AD08_RS28705;Dbxref=Genbank:WP_001310798.1;Name=WP_001310798.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165318.1;locus_tag=AD08_RS28705;product=stress response membrane protein YncL;protein_id=WP_001310798.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 141640 141813 . + . ID=gene-AD08_RS0125720;Name=AD08_RS0125720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125720 NZ_JHDJ01000143.1 Protein Homology CDS 141640 141813 . + 0 ID=cds-WP_000061178.1;Parent=gene-AD08_RS0125720;Dbxref=Genbank:WP_000061178.1;Name=WP_000061178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=AD08_RS0125720;product=orphan toxin OrtT;protein_id=WP_000061178.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 141899 142132 . + . ID=gene-AD08_RS14345;Name=AD08_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14345;old_locus_tag=AD08_1658 NZ_JHDJ01000143.1 Protein Homology CDS 141899 142132 . + 0 ID=cds-WP_000018633.1;Parent=gene-AD08_RS14345;Dbxref=Genbank:WP_000018633.1;Name=WP_000018633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310077.1;locus_tag=AD08_RS14345;product=YdcY family protein;protein_id=WP_000018633.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 142133 142582 . - . ID=gene-AD08_RS14340;Name=AD08_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14340;old_locus_tag=AD08_1659 NZ_JHDJ01000143.1 Protein Homology CDS 142133 142582 . - 0 ID=cds-WP_001076535.1;Parent=gene-AD08_RS14340;Dbxref=Genbank:WP_001076535.1;Name=WP_001076535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415964.1;locus_tag=AD08_RS14340;product=DMT family transporter;protein_id=WP_001076535.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 142579 143097 . - . ID=gene-AD08_RS14335;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=AD08_RS14335;old_locus_tag=AD08_1660 NZ_JHDJ01000143.1 Protein Homology CDS 142579 143097 . - 0 ID=cds-WP_001310799.1;Parent=gene-AD08_RS14335;Dbxref=Genbank:WP_001310799.1;Name=WP_001310799.1;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415965.1;locus_tag=AD08_RS14335;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WP_001310799.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 143278 144315 . + . ID=gene-AD08_RS14330;Name=curA;gbkey=Gene;gene=curA;gene_biotype=protein_coding;locus_tag=AD08_RS14330;old_locus_tag=AD08_1661 NZ_JHDJ01000143.1 Protein Homology CDS 143278 144315 . + 0 ID=cds-WP_000531462.1;Parent=gene-AD08_RS14330;Dbxref=Genbank:WP_000531462.1;Name=WP_000531462.1;gbkey=CDS;gene=curA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415966.6;locus_tag=AD08_RS14330;product=NADPH-dependent curcumin/dihydrocurcumin reductase;protein_id=WP_000531462.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 144513 145178 . + . ID=gene-AD08_RS14325;Name=AD08_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14325;old_locus_tag=AD08_1662 NZ_JHDJ01000143.1 Protein Homology CDS 144513 145178 . + 0 ID=cds-WP_001300742.1;Parent=gene-AD08_RS14325;Dbxref=Genbank:WP_001300742.1;Name=WP_001300742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415967.2;locus_tag=AD08_RS14325;product=DNA-binding transcriptional regulator McbR;protein_id=WP_001300742.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 145214 147316 . - . ID=gene-AD08_RS14320;Name=AD08_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14320;old_locus_tag=AD08_1663 NZ_JHDJ01000143.1 Protein Homology CDS 145214 147316 . - 0 ID=cds-WP_000689363.1;Parent=gene-AD08_RS14320;Dbxref=Genbank:WP_000689363.1;Name=WP_000689363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415968.1;locus_tag=AD08_RS14320;product=TonB-dependent receptor;protein_id=WP_000689363.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 147558 148619 . + . ID=gene-AD08_RS14315;Name=AD08_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14315;old_locus_tag=AD08_1664 NZ_JHDJ01000143.1 Protein Homology CDS 147558 148619 . + 0 ID=cds-WP_000550695.1;Parent=gene-AD08_RS14315;Dbxref=Genbank:WP_000550695.1;Name=WP_000550695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415969.1;locus_tag=AD08_RS14315;product=YncE family protein;protein_id=WP_000550695.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 148732 150231 . - . ID=gene-AD08_RS14310;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=AD08_RS14310;old_locus_tag=AD08_1665 NZ_JHDJ01000143.1 Protein Homology CDS 148732 150231 . - 0 ID=cds-WP_001300590.1;Parent=gene-AD08_RS14310;Dbxref=Genbank:WP_001300590.1;Name=WP_001300590.1;gbkey=CDS;gene=ansP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310084.2;locus_tag=AD08_RS14310;product=L-asparagine permease;protein_id=WP_001300590.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 150498 151115 . + . ID=gene-AD08_RS14305;Name=AD08_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14305;old_locus_tag=AD08_1666 NZ_JHDJ01000143.1 Protein Homology CDS 150498 151115 . + 0 ID=cds-WP_000598857.1;Parent=gene-AD08_RS14305;Dbxref=Genbank:WP_000598857.1;Name=WP_000598857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415971.1;locus_tag=AD08_RS14305;product=glutathione S-transferase family protein;protein_id=WP_000598857.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 151191 151403 . + . ID=gene-AD08_RS0125725;Name=AD08_RS0125725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125725 NZ_JHDJ01000143.1 Protein Homology CDS 151191 151403 . + 0 ID=cds-WP_000226995.1;Parent=gene-AD08_RS0125725;Dbxref=Genbank:WP_000226995.1;Name=WP_000226995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415972.1;locus_tag=AD08_RS0125725;product=YncH family protein;protein_id=WP_000226995.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 152223 154331 . + . ID=gene-AD08_RS14300;Name=AD08_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14300;old_locus_tag=AD08_1668 NZ_JHDJ01000143.1 Protein Homology CDS 152223 154331 . + 0 ID=cds-WP_032218595.1;Parent=gene-AD08_RS14300;Dbxref=Genbank:WP_032218595.1;Name=WP_032218595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310087.1;locus_tag=AD08_RS14300;product=type VI secretion system tip protein VgrG;protein_id=WP_032218595.1;transl_table=11 NZ_JHDJ01000143.1 RefSeq gene 154398 154821 . + . ID=gene-AD08_RS14295;Name=AD08_RS14295;end_range=154821,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14295;old_locus_tag=AD08_1669;partial=true NZ_JHDJ01000143.1 Protein Homology CDS 154398 154821 . + 0 ID=cds-WP_032218596.1;Parent=gene-AD08_RS14295;Dbxref=Genbank:WP_032218596.1;Name=WP_032218596.1;end_range=154821,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=AD08_RS14295;partial=true;product=type IV secretion protein Rhs;protein_id=WP_032218596.1;transl_table=11 ##sequence-region NZ_JHDJ01000144.1 1 3508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000144.1 RefSeq region 1 3508 . + . ID=NZ_JHDJ01000144.1:1..3508;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000144.1 RefSeq gene 1 926 . + . ID=gene-AD08_RS14290;Name=AD08_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14290;old_locus_tag=AD08_1670;partial=true;start_range=.,1 NZ_JHDJ01000144.1 Protein Homology CDS 1 926 . + 2 ID=cds-WP_032218602.1;Parent=gene-AD08_RS14290;Dbxref=Genbank:WP_032218602.1;Name=WP_032218602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308756.1;locus_tag=AD08_RS14290;partial=true;product=hypothetical protein;protein_id=WP_032218602.1;start_range=.,1;transl_table=11 NZ_JHDJ01000144.1 RefSeq gene 923 1492 . + . ID=gene-AD08_RS14285;Name=AD08_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14285;old_locus_tag=AD08_1671 NZ_JHDJ01000144.1 Protein Homology CDS 923 1492 . + 0 ID=cds-WP_032218603.1;Parent=gene-AD08_RS14285;Dbxref=Genbank:WP_032218603.1;Name=WP_032218603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415232.1;locus_tag=AD08_RS14285;product=hypothetical protein;protein_id=WP_032218603.1;transl_table=11 NZ_JHDJ01000144.1 RefSeq pseudogene 1718 1951 . + . ID=gene-AD08_RS14280;Name=AD08_RS14280;end_range=1951,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS14280;old_locus_tag=AD08_1672;partial=true;pseudo=true NZ_JHDJ01000144.1 Protein Homology CDS 1718 1951 . + 0 ID=cds-AD08_RS14280;Parent=gene-AD08_RS14280;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1951,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD08_RS14280;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDJ01000144.1 RefSeq pseudogene 2098 3234 . + . ID=gene-AD08_RS14275;Name=AD08_RS14275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS14275;old_locus_tag=AD08_1673;pseudo=true NZ_JHDJ01000144.1 Protein Homology CDS 2098 3234 . + 0 ID=cds-AD08_RS14275;Parent=gene-AD08_RS14275;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD08_RS14275;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JHDJ01000144.1 RefSeq gene 3365 3508 . + . ID=gene-AD08_RS28725;Name=AD08_RS28725;end_range=3508,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS28725;old_locus_tag=AD08_1674;partial=true NZ_JHDJ01000144.1 Protein Homology CDS 3365 3508 . + 0 ID=cds-WP_129560714.1;Parent=gene-AD08_RS28725;Dbxref=Genbank:WP_129560714.1;Name=WP_129560714.1;end_range=3508,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD08_RS28725;partial=true;product=transposase family protein;protein_id=WP_129560714.1;transl_table=11 ##sequence-region NZ_JHDJ01000145.1 1 132551 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000145.1 RefSeq region 1 132551 . + . ID=NZ_JHDJ01000145.1:1..132551;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000145.1 RefSeq gene 1 909 . + . ID=gene-AD08_RS14270;Name=AD08_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14270;old_locus_tag=AD08_1675;partial=true;start_range=.,1 NZ_JHDJ01000145.1 Protein Homology CDS 1 909 . + 0 ID=cds-WP_050436517.1;Parent=gene-AD08_RS14270;Dbxref=Genbank:WP_050436517.1;Name=WP_050436517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421020.1;locus_tag=AD08_RS14270;partial=true;product=ISAs1-like element ISEc5 family transposase;protein_id=WP_050436517.1;start_range=.,1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 1009 1242 . + . ID=gene-AD08_RS14265;Name=pptA;gbkey=Gene;gene=pptA;gene_biotype=protein_coding;locus_tag=AD08_RS14265;old_locus_tag=AD08_1676 NZ_JHDJ01000145.1 Protein Homology CDS 1009 1242 . + 0 ID=cds-WP_001120143.1;Parent=gene-AD08_RS14265;Dbxref=Genbank:WP_001120143.1;Name=WP_001120143.1;gbkey=CDS;gene=pptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415978.1;locus_tag=AD08_RS14265;product=tautomerase PptA;protein_id=WP_001120143.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 1239 1808 . - . ID=gene-AD08_RS14260;Name=AD08_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14260;old_locus_tag=AD08_1677 NZ_JHDJ01000145.1 Protein Homology CDS 1239 1808 . - 0 ID=cds-WP_000085899.1;Parent=gene-AD08_RS14260;Dbxref=Genbank:WP_000085899.1;Name=WP_000085899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415979.2;locus_tag=AD08_RS14260;product=flavin reductase family protein;protein_id=WP_000085899.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 1981 2826 . + . ID=gene-AD08_RS14255;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=AD08_RS14255;old_locus_tag=AD08_1678 NZ_JHDJ01000145.1 Protein Homology CDS 1981 2826 . + 0 ID=cds-WP_032218606.1;Parent=gene-AD08_RS14255;Dbxref=Genbank:WP_032218606.1;Name=WP_032218606.1;gbkey=CDS;gene=nhoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415980.1;locus_tag=AD08_RS14255;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_032218606.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 2922 3815 . - . ID=gene-AD08_RS14250;Name=AD08_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14250;old_locus_tag=AD08_1679 NZ_JHDJ01000145.1 Protein Homology CDS 2922 3815 . - 0 ID=cds-WP_000804385.1;Parent=gene-AD08_RS14250;Dbxref=Genbank:WP_000804385.1;Name=WP_000804385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415981.1;locus_tag=AD08_RS14250;product=PhzF family isomerase;protein_id=WP_000804385.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 3894 4574 . - . ID=gene-AD08_RS14245;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AD08_RS14245;old_locus_tag=AD08_1680 NZ_JHDJ01000145.1 Protein Homology CDS 3894 4574 . - 0 ID=cds-WP_000617115.1;Parent=gene-AD08_RS14245;Dbxref=Genbank:WP_000617115.1;Name=WP_000617115.1;gbkey=CDS;gene=narI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310095.1;locus_tag=AD08_RS14245;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617115.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 4571 5266 . - . ID=gene-AD08_RS14240;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=AD08_RS14240;old_locus_tag=AD08_1681 NZ_JHDJ01000145.1 Protein Homology CDS 4571 5266 . - 0 ID=cds-WP_001166353.1;Parent=gene-AD08_RS14240;Dbxref=Genbank:WP_001166353.1;Name=WP_001166353.1;gbkey=CDS;gene=narW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415983.1;locus_tag=AD08_RS14240;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166353.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 5266 6810 . - . ID=gene-AD08_RS14235;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AD08_RS14235;old_locus_tag=AD08_1682 NZ_JHDJ01000145.1 Protein Homology CDS 5266 6810 . - 0 ID=cds-WP_000702535.1;Parent=gene-AD08_RS14235;Dbxref=Genbank:WP_000702535.1;Name=WP_000702535.1;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415984.1;locus_tag=AD08_RS14235;product=nitrate reductase subunit beta;protein_id=WP_000702535.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 6807 10547 . - . ID=gene-AD08_RS14230;Name=AD08_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14230;old_locus_tag=AD08_1683 NZ_JHDJ01000145.1 Protein Homology CDS 6807 10547 . - 0 ID=cds-WP_001425589.1;Parent=gene-AD08_RS14230;Dbxref=Genbank:WP_001425589.1;Name=WP_001425589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415985.1;locus_tag=AD08_RS14230;product=nitrate reductase Z subunit alpha;protein_id=WP_001425589.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 10629 12017 . - . ID=gene-AD08_RS14225;Name=AD08_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14225;old_locus_tag=AD08_1684 NZ_JHDJ01000145.1 Protein Homology CDS 10629 12017 . - 0 ID=cds-WP_032218608.1;Parent=gene-AD08_RS14225;Dbxref=Genbank:WP_032218608.1;Name=WP_032218608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415986.1;locus_tag=AD08_RS14225;product=nitrate/nitrite transporter NarU;protein_id=WP_032218608.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq pseudogene 12341 13671 . - . ID=gene-AD08_RS0125730;Name=AD08_RS0125730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125730;pseudo=true NZ_JHDJ01000145.1 Protein Homology CDS 12341 13671 . - 0 ID=cds-AD08_RS0125730;Parent=gene-AD08_RS0125730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627100.1;locus_tag=AD08_RS0125730;product=leucine-rich repeat domain-containing protein;pseudo=true;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 13695 13985 . - . ID=gene-AD08_RS14220;Name=AD08_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14220;old_locus_tag=AD08_1686 NZ_JHDJ01000145.1 Protein Homology CDS 13695 13985 . - 0 ID=cds-WP_000768384.1;Parent=gene-AD08_RS14220;Dbxref=Genbank:WP_000768384.1;Name=WP_000768384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518782.1;locus_tag=AD08_RS14220;product=lipoprotein;protein_id=WP_000768384.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 14245 15126 . - . ID=gene-AD08_RS14215;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=AD08_RS14215;old_locus_tag=AD08_1687 NZ_JHDJ01000145.1 Protein Homology CDS 14245 15126 . - 0 ID=cds-WP_000198205.1;Parent=gene-AD08_RS14215;Dbxref=Genbank:WP_000198205.1;Name=WP_000198205.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415990.5;locus_tag=AD08_RS14215;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000198205.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 15358 18405 . + . ID=gene-AD08_RS14205;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AD08_RS14205;old_locus_tag=AD08_1690 NZ_JHDJ01000145.1 Protein Homology CDS 15358 18405 . + 0 ID=cds-WP_077251008.1;Parent=gene-AD08_RS14205;Dbxref=Genbank:WP_077251008.1;Name=WP_077251008.1;gbkey=CDS;gene=fdnG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415991.1;locus_tag=AD08_RS14205;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077251008.1;transl_except=(pos:15943..15945%2Caa:Sec);transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 18418 19302 . + . ID=gene-AD08_RS14200;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=AD08_RS14200;old_locus_tag=AD08_1691 NZ_JHDJ01000145.1 Protein Homology CDS 18418 19302 . + 0 ID=cds-WP_001240582.1;Parent=gene-AD08_RS14200;Dbxref=Genbank:WP_001240582.1;Name=WP_001240582.1;gbkey=CDS;gene=fdxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415992.1;locus_tag=AD08_RS14200;product=formate dehydrogenase N subunit beta;protein_id=WP_001240582.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 19295 19948 . + . ID=gene-AD08_RS14195;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=AD08_RS14195;old_locus_tag=AD08_1692 NZ_JHDJ01000145.1 Protein Homology CDS 19295 19948 . + 0 ID=cds-WP_000045648.1-2;Parent=gene-AD08_RS14195;Dbxref=Genbank:WP_000045648.1;Name=WP_000045648.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310107.1;locus_tag=AD08_RS14195;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045648.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 20533 20817 . - . ID=gene-AD08_RS14190;Name=AD08_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14190;old_locus_tag=AD08_1693 NZ_JHDJ01000145.1 Protein Homology CDS 20533 20817 . - 0 ID=cds-WP_000781370.1-2;Parent=gene-AD08_RS14190;Dbxref=Genbank:WP_000781370.1;Name=WP_000781370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415994.4;locus_tag=AD08_RS14190;product=HigA family addiction module antidote protein;protein_id=WP_000781370.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 20963 21973 . - . ID=gene-AD08_RS14185;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=AD08_RS14185;old_locus_tag=AD08_1694 NZ_JHDJ01000145.1 Protein Homology CDS 20963 21973 . - 0 ID=cds-WP_000642433.1;Parent=gene-AD08_RS14185;Dbxref=Genbank:WP_000642433.1;Name=WP_000642433.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415995.4;locus_tag=AD08_RS14185;product=alcohol dehydrogenase AdhP;protein_id=WP_000642433.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 22107 23804 . - . ID=gene-AD08_RS14180;Name=AD08_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14180;old_locus_tag=AD08_1695 NZ_JHDJ01000145.1 Protein Homology CDS 22107 23804 . - 0 ID=cds-WP_000433476.1;Parent=gene-AD08_RS14180;Dbxref=Genbank:WP_000433476.1;Name=WP_000433476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415996.2;locus_tag=AD08_RS14180;product=malate dehydrogenase;protein_id=WP_000433476.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 23961 24098 . - . ID=gene-AD08_RS14175;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=AD08_RS14175;old_locus_tag=AD08_1696 NZ_JHDJ01000145.1 Protein Homology CDS 23961 24098 . - 0 ID=cds-WP_000841554.1;Parent=gene-AD08_RS14175;Dbxref=Genbank:WP_000841554.1;Name=WP_000841554.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310111.1;locus_tag=AD08_RS14175;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841554.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 24200 24415 . - . ID=gene-AD08_RS14170;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=AD08_RS14170;old_locus_tag=AD08_1697 NZ_JHDJ01000145.1 Protein Homology CDS 24200 24415 . - 0 ID=cds-WP_000495771.1;Parent=gene-AD08_RS14170;Dbxref=Genbank:WP_000495771.1;Name=WP_000495771.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415998.4;locus_tag=AD08_RS14170;product=biofilm-dependent modulation protein;protein_id=WP_000495771.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 24760 25191 . + . ID=gene-AD08_RS14165;Name=osmC;gbkey=Gene;gene=osmC;gene_biotype=protein_coding;locus_tag=AD08_RS14165;old_locus_tag=AD08_1698 NZ_JHDJ01000145.1 Protein Homology CDS 24760 25191 . + 0 ID=cds-WP_000152305.1;Parent=gene-AD08_RS14165;Dbxref=Genbank:WP_000152305.1;Name=WP_000152305.1;gbkey=CDS;gene=osmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415999.1;locus_tag=AD08_RS14165;product=peroxiredoxin OsmC;protein_id=WP_000152305.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 25247 26173 . - . ID=gene-AD08_RS14160;Name=AD08_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14160;old_locus_tag=AD08_1699 NZ_JHDJ01000145.1 Protein Homology CDS 25247 26173 . - 0 ID=cds-WP_001494197.1;Parent=gene-AD08_RS14160;Dbxref=Genbank:WP_001494197.1;Name=WP_001494197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416000.1;locus_tag=AD08_RS14160;product=ABC transporter ATP-binding protein;protein_id=WP_001494197.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 26166 27152 . - . ID=gene-AD08_RS14155;Name=AD08_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14155;old_locus_tag=AD08_1700 NZ_JHDJ01000145.1 Protein Homology CDS 26166 27152 . - 0 ID=cds-WP_000193547.1;Parent=gene-AD08_RS14155;Dbxref=Genbank:WP_000193547.1;Name=WP_000193547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416001.1;locus_tag=AD08_RS14155;product=ABC transporter ATP-binding protein;protein_id=WP_000193547.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 27149 28045 . - . ID=gene-AD08_RS14150;Name=AD08_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14150;old_locus_tag=AD08_1701 NZ_JHDJ01000145.1 Protein Homology CDS 27149 28045 . - 0 ID=cds-WP_000979626.1;Parent=gene-AD08_RS14150;Dbxref=Genbank:WP_000979626.1;Name=WP_000979626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416002.1;locus_tag=AD08_RS14150;product=D%2CD-dipeptide ABC transporter permease;protein_id=WP_000979626.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 28042 29064 . - . ID=gene-AD08_RS14145;Name=AD08_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14145;old_locus_tag=AD08_1702 NZ_JHDJ01000145.1 Protein Homology CDS 28042 29064 . - 0 ID=cds-WP_000145123.1;Parent=gene-AD08_RS14145;Dbxref=Genbank:WP_000145123.1;Name=WP_000145123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416003.1;locus_tag=AD08_RS14145;product=ABC transporter permease;protein_id=WP_000145123.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 29066 30616 . - . ID=gene-AD08_RS14140;Name=AD08_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14140;old_locus_tag=AD08_1703 NZ_JHDJ01000145.1 Protein Homology CDS 29066 30616 . - 0 ID=cds-WP_000830550.1;Parent=gene-AD08_RS14140;Dbxref=Genbank:WP_000830550.1;Name=WP_000830550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416004.1;locus_tag=AD08_RS14140;product=ABC transporter substrate-binding protein;protein_id=WP_000830550.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 30630 31211 . - . ID=gene-AD08_RS14135;Name=ddpX;gbkey=Gene;gene=ddpX;gene_biotype=protein_coding;locus_tag=AD08_RS14135;old_locus_tag=AD08_1704 NZ_JHDJ01000145.1 Protein Homology CDS 30630 31211 . - 0 ID=cds-WP_001405192.1;Parent=gene-AD08_RS14135;Dbxref=Genbank:WP_001405192.1;Name=WP_001405192.1;gbkey=CDS;gene=ddpX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416005.1;locus_tag=AD08_RS14135;product=D-alanyl-D-alanine dipeptidase;protein_id=WP_001405192.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 31469 33868 . - . ID=gene-AD08_RS14130;Name=dosP;gbkey=Gene;gene=dosP;gene_biotype=protein_coding;gene_synonym=pdeO;locus_tag=AD08_RS14130;old_locus_tag=AD08_1705 NZ_JHDJ01000145.1 Protein Homology CDS 31469 33868 . - 0 ID=cds-WP_077699018.1;Parent=gene-AD08_RS14130;Dbxref=Genbank:WP_077699018.1;Name=WP_077699018.1;gbkey=CDS;gene=dosP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416006.4;locus_tag=AD08_RS14130;product=oxygen-sensing cyclic-di-GMP phosphodiesterase;protein_id=WP_077699018.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 33893 35275 . - . ID=gene-AD08_RS14125;Name=dosC;gbkey=Gene;gene=dosC;gene_biotype=protein_coding;locus_tag=AD08_RS14125;old_locus_tag=AD08_1706 NZ_JHDJ01000145.1 Protein Homology CDS 33893 35275 . - 0 ID=cds-WP_000426292.1;Parent=gene-AD08_RS14125;Dbxref=Genbank:WP_000426292.1;Name=WP_000426292.1;gbkey=CDS;gene=dosC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310122.1;locus_tag=AD08_RS14125;product=diguanylate cyclase DosC;protein_id=WP_000426292.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 35639 36958 . - . ID=gene-AD08_RS14120;Name=AD08_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14120;old_locus_tag=AD08_1707 NZ_JHDJ01000145.1 Protein Homology CDS 35639 36958 . - 0 ID=cds-WP_000350395.1;Parent=gene-AD08_RS14120;Dbxref=Genbank:WP_000350395.1;Name=WP_000350395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310123.1;locus_tag=AD08_RS14120;product=glycoside hydrolase family 10 protein;protein_id=WP_000350395.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 37089 38624 . - . ID=gene-AD08_RS14115;Name=gadC;gbkey=Gene;gene=gadC;gene_biotype=protein_coding;locus_tag=AD08_RS14115;old_locus_tag=AD08_1708 NZ_JHDJ01000145.1 Protein Homology CDS 37089 38624 . - 0 ID=cds-WP_000246019.1;Parent=gene-AD08_RS14115;Dbxref=Genbank:WP_000246019.1;Name=WP_000246019.1;gbkey=CDS;gene=gadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416009.1;locus_tag=AD08_RS14115;product=acid resistance gamma-aminobutyrate antiporter GadC;protein_id=WP_000246019.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 38780 40180 . - . ID=gene-AD08_RS14110;Name=AD08_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14110;old_locus_tag=AD08_1709 NZ_JHDJ01000145.1 Protein Homology CDS 38780 40180 . - 0 ID=cds-WP_000358930.1;Parent=gene-AD08_RS14110;Dbxref=Genbank:WP_000358930.1;Name=WP_000358930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AD08_RS14110;product=glutamate decarboxylase;protein_id=WP_000358930.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 40542 43337 . - . ID=gene-AD08_RS14105;Name=AD08_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14105;old_locus_tag=AD08_1711 NZ_JHDJ01000145.1 Protein Homology CDS 40542 43337 . - 0 ID=cds-WP_077699016.1;Parent=gene-AD08_RS14105;Dbxref=Genbank:WP_077699016.1;Name=WP_077699016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416011.1;locus_tag=AD08_RS14105;product=insulinase family protein;protein_id=WP_077699016.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 43382 45754 . - . ID=gene-AD08_RS14100;Name=AD08_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14100;old_locus_tag=AD08_1712 NZ_JHDJ01000145.1 Protein Homology CDS 43382 45754 . - 0 ID=cds-WP_032218618.1;Parent=gene-AD08_RS14100;Dbxref=Genbank:WP_032218618.1;Name=WP_032218618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416012.1;locus_tag=AD08_RS14100;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_032218618.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 45792 47477 . - . ID=gene-AD08_RS14095;Name=AD08_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14095;old_locus_tag=AD08_1713 NZ_JHDJ01000145.1 Protein Homology CDS 45792 47477 . - 0 ID=cds-WP_000628576.1;Parent=gene-AD08_RS14095;Dbxref=Genbank:WP_000628576.1;Name=WP_000628576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416013.1;locus_tag=AD08_RS14095;product=ABC transporter ATP-binding protein/permease;protein_id=WP_000628576.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 47680 47802 . + . ID=gene-AD08_RS31675;Name=AD08_RS31675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31675 NZ_JHDJ01000145.1 Protein Homology CDS 47680 47802 . + 0 ID=cds-WP_120795387.1;Parent=gene-AD08_RS31675;Dbxref=Genbank:WP_120795387.1;Name=WP_120795387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518784.1;locus_tag=AD08_RS31675;product=protein YneP;protein_id=WP_120795387.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 47768 48925 . - . ID=gene-AD08_RS14090;Name=AD08_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14090;old_locus_tag=AD08_1714 NZ_JHDJ01000145.1 Protein Homology CDS 47768 48925 . - 0 ID=cds-WP_001301030.1;Parent=gene-AD08_RS14090;Dbxref=Genbank:WP_001301030.1;Name=WP_001301030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416014.4;locus_tag=AD08_RS14090;product=anaerobic sulfatase maturase;protein_id=WP_001301030.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 48977 50659 . - . ID=gene-AD08_RS14085;Name=AD08_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS14085;old_locus_tag=AD08_1715 NZ_JHDJ01000145.1 Protein Homology CDS 48977 50659 . - 0 ID=cds-WP_001295684.1;Parent=gene-AD08_RS14085;Dbxref=Genbank:WP_001295684.1;Name=WP_001295684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416015.2;locus_tag=AD08_RS14085;product=sulfatase-like hydrolase/transferase;protein_id=WP_001295684.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 51061 51822 . - . ID=gene-AD08_RS14080;Name=ydeO;gbkey=Gene;gene=ydeO;gene_biotype=protein_coding;locus_tag=AD08_RS14080;old_locus_tag=AD08_1716 NZ_JHDJ01000145.1 Protein Homology CDS 51061 51822 . - 0 ID=cds-WP_000060492.1;Parent=gene-AD08_RS14080;Dbxref=Genbank:WP_000060492.1;Name=WP_000060492.1;gbkey=CDS;gene=ydeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416016.1;locus_tag=AD08_RS14080;product=acid stress response transcriptional regulator YdeO;protein_id=WP_000060492.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 51897 52094 . - . ID=gene-AD08_RS14075;Name=safA;gbkey=Gene;gene=safA;gene_biotype=protein_coding;locus_tag=AD08_RS14075;old_locus_tag=AD08_1717 NZ_JHDJ01000145.1 Protein Homology CDS 51897 52094 . - 0 ID=cds-WP_000543384.1;Parent=gene-AD08_RS14075;Dbxref=Genbank:WP_000543384.1;Name=WP_000543384.1;gbkey=CDS;gene=safA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416017.1;locus_tag=AD08_RS14075;product=two-component system connector SafA;protein_id=WP_000543384.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 52342 54621 . - . ID=gene-AD08_RS14070;Name=ydeP;gbkey=Gene;gene=ydeP;gene_biotype=protein_coding;locus_tag=AD08_RS14070;old_locus_tag=AD08_1718 NZ_JHDJ01000145.1 Protein Homology CDS 52342 54621 . - 0 ID=cds-WP_000726691.1;Parent=gene-AD08_RS14070;Dbxref=Genbank:WP_000726691.1;Name=WP_000726691.1;gbkey=CDS;gene=ydeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416018.1;locus_tag=AD08_RS14070;product=acid resistance putative oxidoreductase YdeP;protein_id=WP_000726691.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq pseudogene 54955 55868 . - . ID=gene-AD08_RS14065;Name=AD08_RS14065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS14065;old_locus_tag=AD08_1719;pseudo=true NZ_JHDJ01000145.1 Protein Homology CDS 54955 55868 . - 0 ID=cds-AD08_RS14065;Parent=gene-AD08_RS14065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416019.1;locus_tag=AD08_RS14065;product=fimbrial protein;pseudo=true;transl_table=11 NZ_JHDJ01000145.1 RefSeq pseudogene 56073 56573 . - . ID=gene-AD08_RS0125740;Name=AD08_RS0125740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125740;partial=true;pseudo=true;start_range=.,56073 NZ_JHDJ01000145.1 Protein Homology CDS 56073 56573 . - 0 ID=cds-AD08_RS0125740;Parent=gene-AD08_RS0125740;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416021.1;locus_tag=AD08_RS0125740;partial=true;product=type 1 fimbrial protein;pseudo=true;start_range=.,56073;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 57008 58330 . - . ID=gene-AD08_RS14060;Name=hipA;gbkey=Gene;gene=hipA;gene_biotype=protein_coding;locus_tag=AD08_RS14060;old_locus_tag=AD08_1721 NZ_JHDJ01000145.1 Protein Homology CDS 57008 58330 . - 0 ID=cds-WP_032218619.1;Parent=gene-AD08_RS14060;Dbxref=Genbank:WP_032218619.1;Name=WP_032218619.1;gbkey=CDS;gene=hipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416024.1;locus_tag=AD08_RS14060;product=type II toxin-antitoxin system serine/threonine protein kinase toxin HipA;protein_id=WP_032218619.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 58330 58596 . - . ID=gene-AD08_RS14055;Name=hipB;gbkey=Gene;gene=hipB;gene_biotype=protein_coding;locus_tag=AD08_RS14055;old_locus_tag=AD08_1722 NZ_JHDJ01000145.1 Protein Homology CDS 58330 58596 . - 0 ID=cds-WP_001301023.1;Parent=gene-AD08_RS14055;Dbxref=Genbank:WP_001301023.1;Name=WP_001301023.1;gbkey=CDS;gene=hipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416025.1;locus_tag=AD08_RS14055;product=type II toxin-antitoxin system antitoxin HipB;protein_id=WP_001301023.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq pseudogene 58819 63152 . - . ID=gene-AD08_RS31680;Name=AD08_RS31680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31680;pseudo=true NZ_JHDJ01000145.1 Protein Homology CDS 58819 63152 . - 0 ID=cds-AD08_RS31680;Parent=gene-AD08_RS31680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244610.1;locus_tag=AD08_RS31680;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 63683 65275 . - . ID=gene-AD08_RS14040;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=AD08_RS14040;old_locus_tag=AD08_1725 NZ_JHDJ01000145.1 Protein Homology CDS 63683 65275 . - 0 ID=cds-WP_000113108.1;Parent=gene-AD08_RS14040;Dbxref=Genbank:WP_000113108.1;Name=WP_000113108.1;gbkey=CDS;gene=lsrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416028.3;locus_tag=AD08_RS14040;product=autoinducer-2 kinase;protein_id=WP_000113108.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 65354 66307 . - . ID=gene-AD08_RS14035;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=AD08_RS14035;old_locus_tag=AD08_1726 NZ_JHDJ01000145.1 Protein Homology CDS 65354 66307 . - 0 ID=cds-WP_000154342.1;Parent=gene-AD08_RS14035;Dbxref=Genbank:WP_000154342.1;Name=WP_000154342.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416029.1;locus_tag=AD08_RS14035;product=transcriptional regulator LsrR;protein_id=WP_000154342.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 66556 68091 . + . ID=gene-AD08_RS14030;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=AD08_RS14030;old_locus_tag=AD08_1727 NZ_JHDJ01000145.1 Protein Homology CDS 66556 68091 . + 0 ID=cds-WP_032218621.1;Parent=gene-AD08_RS14030;Dbxref=Genbank:WP_032218621.1;Name=WP_032218621.1;gbkey=CDS;gene=lsrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416030.1;locus_tag=AD08_RS14030;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_032218621.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 68085 69113 . + . ID=gene-AD08_RS14025;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=AD08_RS14025;old_locus_tag=AD08_1728 NZ_JHDJ01000145.1 Protein Homology CDS 68085 69113 . + 0 ID=cds-WP_000911184.1;Parent=gene-AD08_RS14025;Dbxref=Genbank:WP_000911184.1;Name=WP_000911184.1;gbkey=CDS;gene=lsrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416031.1;locus_tag=AD08_RS14025;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_000911184.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 69113 70105 . + . ID=gene-AD08_RS14020;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=AD08_RS14020;old_locus_tag=AD08_1729 NZ_JHDJ01000145.1 Protein Homology CDS 69113 70105 . + 0 ID=cds-WP_001222721.1;Parent=gene-AD08_RS14020;Dbxref=Genbank:WP_001222721.1;Name=WP_001222721.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416032.1;locus_tag=AD08_RS14020;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_001222721.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 70117 71139 . + . ID=gene-AD08_RS14015;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=AD08_RS14015;old_locus_tag=AD08_1730 NZ_JHDJ01000145.1 Protein Homology CDS 70117 71139 . + 0 ID=cds-WP_001738040.1;Parent=gene-AD08_RS14015;Dbxref=Genbank:WP_001738040.1;Name=WP_001738040.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416033.1;locus_tag=AD08_RS14015;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_001738040.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 71166 72041 . + . ID=gene-AD08_RS14010;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=AD08_RS14010;old_locus_tag=AD08_1731 NZ_JHDJ01000145.1 Protein Homology CDS 71166 72041 . + 0 ID=cds-WP_000774165.1;Parent=gene-AD08_RS14010;Dbxref=Genbank:WP_000774165.1;Name=WP_000774165.1;gbkey=CDS;gene=lsrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416034.1;locus_tag=AD08_RS14010;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_000774165.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 72065 72355 . + . ID=gene-AD08_RS14005;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=AD08_RS14005;old_locus_tag=AD08_1732 NZ_JHDJ01000145.1 Protein Homology CDS 72065 72355 . + 0 ID=cds-WP_000558527.1;Parent=gene-AD08_RS14005;Dbxref=Genbank:WP_000558527.1;Name=WP_000558527.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=AD08_RS14005;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_000558527.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 72412 73170 . + . ID=gene-AD08_RS14000;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=AD08_RS14000;old_locus_tag=AD08_1733 NZ_JHDJ01000145.1 Protein Homology CDS 72412 73170 . + 0 ID=cds-WP_001286597.1;Parent=gene-AD08_RS14000;Dbxref=Genbank:WP_001286597.1;Name=WP_001286597.1;gbkey=CDS;gene=tam;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416036.1;locus_tag=AD08_RS14000;product=trans-aconitate 2-methyltransferase;protein_id=WP_001286597.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 73174 74088 . - . ID=gene-AD08_RS13995;Name=AD08_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13995;old_locus_tag=AD08_1734 NZ_JHDJ01000145.1 Protein Homology CDS 73174 74088 . - 0 ID=cds-WP_001313828.1;Parent=gene-AD08_RS13995;Dbxref=Genbank:WP_001313828.1;Name=WP_001313828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=AD08_RS13995;product=bestrophin family inner membrane protein;protein_id=WP_001313828.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 74295 75746 . - . ID=gene-AD08_RS13990;Name=AD08_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13990;old_locus_tag=AD08_1735 NZ_JHDJ01000145.1 Protein Homology CDS 74295 75746 . - 0 ID=cds-WP_000854633.1;Parent=gene-AD08_RS13990;Dbxref=Genbank:WP_000854633.1;Name=WP_000854633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310155.1;locus_tag=AD08_RS13990;product=tagaturonate reductase;protein_id=WP_000854633.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 75973 76920 . - . ID=gene-AD08_RS13985;Name=AD08_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13985;old_locus_tag=AD08_1736 NZ_JHDJ01000145.1 Protein Homology CDS 75973 76920 . - 0 ID=cds-WP_000878968.1;Parent=gene-AD08_RS13985;Dbxref=Genbank:WP_000878968.1;Name=WP_000878968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416039.1;locus_tag=AD08_RS13985;product=GGDEF domain-containing protein;protein_id=WP_000878968.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 77032 77391 . - . ID=gene-AD08_RS13980;Name=AD08_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13980;old_locus_tag=AD08_1737 NZ_JHDJ01000145.1 Protein Homology CDS 77032 77391 . - 0 ID=cds-WP_001191027.1;Parent=gene-AD08_RS13980;Dbxref=Genbank:WP_001191027.1;Name=WP_001191027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416040.1;locus_tag=AD08_RS13980;product=DUF4186 domain-containing protein;protein_id=WP_001191027.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 77391 78317 . - . ID=gene-AD08_RS13975;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=AD08_RS13975;old_locus_tag=AD08_1738 NZ_JHDJ01000145.1 Protein Homology CDS 77391 78317 . - 0 ID=cds-WP_000257409.1;Parent=gene-AD08_RS13975;Dbxref=Genbank:WP_000257409.1;Name=WP_000257409.1;gbkey=CDS;gene=glsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310158.1;locus_tag=AD08_RS13975;product=glutaminase B;protein_id=WP_000257409.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 78381 79769 . - . ID=gene-AD08_RS13970;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=AD08_RS13970;old_locus_tag=AD08_1739 NZ_JHDJ01000145.1 Protein Homology CDS 78381 79769 . - 0 ID=cds-WP_001738047.1;Parent=gene-AD08_RS13970;Dbxref=Genbank:WP_001738047.1;Name=WP_001738047.1;gbkey=CDS;gene=sad;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416042.2;locus_tag=AD08_RS13970;product=succinate-semialdehyde dehydrogenase;protein_id=WP_001738047.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 79870 80751 . + . ID=gene-AD08_RS13965;Name=AD08_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13965;old_locus_tag=AD08_1740 NZ_JHDJ01000145.1 Protein Homology CDS 79870 80751 . + 0 ID=cds-WP_000366501.1;Parent=gene-AD08_RS13965;Dbxref=Genbank:WP_000366501.1;Name=WP_000366501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416043.1;locus_tag=AD08_RS13965;product=LysR family transcriptional regulator;protein_id=WP_000366501.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 80829 81944 . + . ID=gene-AD08_RS13960;Name=yneK;gbkey=Gene;gene=yneK;gene_biotype=protein_coding;locus_tag=AD08_RS13960;old_locus_tag=AD08_1741 NZ_JHDJ01000145.1 Protein Homology CDS 80829 81944 . + 0 ID=cds-WP_000258599.1;Parent=gene-AD08_RS13960;Dbxref=Genbank:WP_000258599.1;Name=WP_000258599.1;gbkey=CDS;gene=yneK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416044.1;locus_tag=AD08_RS13960;product=putative protein YneK;protein_id=WP_000258599.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 82094 83284 . + . ID=gene-AD08_RS13955;Name=ydeA;gbkey=Gene;gene=ydeA;gene_biotype=protein_coding;locus_tag=AD08_RS13955;old_locus_tag=AD08_1743 NZ_JHDJ01000145.1 Protein Homology CDS 82094 83284 . + 0 ID=cds-WP_000210799.1;Parent=gene-AD08_RS13955;Dbxref=Genbank:WP_000210799.1;Name=WP_000210799.1;gbkey=CDS;gene=ydeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416045.1;locus_tag=AD08_RS13955;product=L-arabinose MFS transporter;protein_id=WP_000210799.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 83309 83974 . - . ID=gene-AD08_RS13950;Name=marC;gbkey=Gene;gene=marC;gene_biotype=protein_coding;locus_tag=AD08_RS13950;old_locus_tag=AD08_1744 NZ_JHDJ01000145.1 Protein Homology CDS 83309 83974 . - 0 ID=cds-WP_000885033.1;Parent=gene-AD08_RS13950;Dbxref=Genbank:WP_000885033.1;Name=WP_000885033.1;gbkey=CDS;gene=marC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416046.1;locus_tag=AD08_RS13950;product=NAAT family transporter MarC;protein_id=WP_000885033.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 84186 84620 . + . ID=gene-AD08_RS13945;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=AD08_RS13945;old_locus_tag=AD08_1745 NZ_JHDJ01000145.1 Protein Homology CDS 84186 84620 . + 0 ID=cds-WP_000843414.1;Parent=gene-AD08_RS13945;Dbxref=Genbank:WP_000843414.1;Name=WP_000843414.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416047.4;locus_tag=AD08_RS13945;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843414.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 84640 85023 . + . ID=gene-AD08_RS13940;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=AD08_RS13940;old_locus_tag=AD08_1746 NZ_JHDJ01000145.1 Protein Homology CDS 84640 85023 . + 0 ID=cds-WP_000091199.1;Parent=gene-AD08_RS13940;Dbxref=Genbank:WP_000091199.1;Name=WP_000091199.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707445.2;locus_tag=AD08_RS13940;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091199.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 85055 85273 . + . ID=gene-AD08_RS13935;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=AD08_RS13935;old_locus_tag=AD08_1747 NZ_JHDJ01000145.1 Protein Homology CDS 85055 85273 . + 0 ID=cds-WP_000803657.1;Parent=gene-AD08_RS13935;Dbxref=Genbank:WP_000803657.1;Name=WP_000803657.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416049.1;locus_tag=AD08_RS13935;product=multiple antibiotic resistance protein MarB;protein_id=WP_000803657.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 85304 86203 . - . ID=gene-AD08_RS13930;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=AD08_RS13930;old_locus_tag=AD08_1748 NZ_JHDJ01000145.1 Protein Homology CDS 85304 86203 . - 0 ID=cds-WP_000087187.1;Parent=gene-AD08_RS13930;Dbxref=Genbank:WP_000087187.1;Name=WP_000087187.1;gbkey=CDS;gene=eamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416050.4;locus_tag=AD08_RS13930;product=O-acetylserine/cysteine exporter;protein_id=WP_000087187.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 86398 87585 . + . ID=gene-AD08_RS13925;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=AD08_RS13925;old_locus_tag=AD08_1749 NZ_JHDJ01000145.1 Protein Homology CDS 86398 87585 . + 0 ID=cds-WP_001054183.1;Parent=gene-AD08_RS13925;Dbxref=Genbank:WP_001054183.1;Name=WP_001054183.1;gbkey=CDS;gene=ydeE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416051.1;locus_tag=AD08_RS13925;product=efflux MFS transporter YdeE;protein_id=WP_001054183.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 87712 87807 . + . ID=gene-AD08_RS0125750;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=AD08_RS0125750 NZ_JHDJ01000145.1 Protein Homology CDS 87712 87807 . + 0 ID=cds-WP_000901367.1;Parent=gene-AD08_RS0125750;Dbxref=Genbank:WP_000901367.1;Name=WP_000901367.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=AD08_RS0125750;product=protein MgtS;protein_id=WP_000901367.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 88026 88916 . - . ID=gene-AD08_RS13920;Name=dgcZ;gbkey=Gene;gene=dgcZ;gene_biotype=protein_coding;locus_tag=AD08_RS13920;old_locus_tag=AD08_1750 NZ_JHDJ01000145.1 Protein Homology CDS 88026 88916 . - 0 ID=cds-WP_000592814.1;Parent=gene-AD08_RS13920;Dbxref=Genbank:WP_000592814.1;Name=WP_000592814.1;gbkey=CDS;gene=dgcZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416052.1;locus_tag=AD08_RS13920;product=diguanylate cyclase DgcZ;protein_id=WP_000592814.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 89171 89563 . - . ID=gene-AD08_RS13915;Name=ydeI;gbkey=Gene;gene=ydeI;gene_biotype=protein_coding;locus_tag=AD08_RS13915;old_locus_tag=AD08_1751 NZ_JHDJ01000145.1 Protein Homology CDS 89171 89563 . - 0 ID=cds-WP_000671737.1;Parent=gene-AD08_RS13915;Dbxref=Genbank:WP_000671737.1;Name=WP_000671737.1;gbkey=CDS;gene=ydeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416054.1;locus_tag=AD08_RS13915;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000671737.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 89839 90357 . + . ID=gene-AD08_RS13910;Name=AD08_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13910;old_locus_tag=AD08_1752 NZ_JHDJ01000145.1 Protein Homology CDS 89839 90357 . + 0 ID=cds-WP_001024746.1;Parent=gene-AD08_RS13910;Dbxref=Genbank:WP_001024746.1;Name=WP_001024746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416055.1;locus_tag=AD08_RS13910;product=2-oxo-tetronate isomerase;protein_id=WP_001024746.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 90401 92446 . - . ID=gene-AD08_RS13905;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=AD08_RS13905;old_locus_tag=AD08_1753 NZ_JHDJ01000145.1 Protein Homology CDS 90401 92446 . - 0 ID=cds-WP_032218627.1;Parent=gene-AD08_RS13905;Dbxref=Genbank:WP_032218627.1;Name=WP_032218627.1;gbkey=CDS;gene=dcp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416056.1;locus_tag=AD08_RS13905;product=peptidyl-dipeptidase Dcp;protein_id=WP_032218627.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 92583 93329 . + . ID=gene-AD08_RS13900;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=AD08_RS13900;old_locus_tag=AD08_1754 NZ_JHDJ01000145.1 Protein Homology CDS 92583 93329 . + 0 ID=cds-WP_000636571.1;Parent=gene-AD08_RS13900;Dbxref=Genbank:WP_000636571.1;Name=WP_000636571.1;gbkey=CDS;gene=ydfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416057.1;locus_tag=AD08_RS13900;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636571.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 93418 94104 . + . ID=gene-AD08_RS13895;Name=AD08_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13895;old_locus_tag=AD08_1755 NZ_JHDJ01000145.1 Protein Homology CDS 93418 94104 . + 0 ID=cds-WP_000215549.1;Parent=gene-AD08_RS13895;Dbxref=Genbank:WP_000215549.1;Name=WP_000215549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310176.1;locus_tag=AD08_RS13895;product=DNA-binding transcriptional regulator YdfH;protein_id=WP_000215549.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 94281 94484 . + . ID=gene-AD08_RS13890;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=AD08_RS13890;old_locus_tag=AD08_1756 NZ_JHDJ01000145.1 Protein Homology CDS 94281 94484 . + 0 ID=cds-WP_000214712.1;Parent=gene-AD08_RS13890;Dbxref=Genbank:WP_000214712.1;Name=WP_000214712.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310177.1;locus_tag=AD08_RS13890;product=putative selenium delivery protein YdfZ;protein_id=WP_000214712.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 94519 95979 . - . ID=gene-AD08_RS13885;Name=AD08_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13885;old_locus_tag=AD08_1757 NZ_JHDJ01000145.1 Protein Homology CDS 94519 95979 . - 0 ID=cds-WP_000527809.1;Parent=gene-AD08_RS13885;Dbxref=Genbank:WP_000527809.1;Name=WP_000527809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416060.1;locus_tag=AD08_RS13885;product=mannitol dehydrogenase family protein;protein_id=WP_000527809.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 96068 97435 . - . ID=gene-AD08_RS13880;Name=AD08_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13880;old_locus_tag=AD08_1758 NZ_JHDJ01000145.1 Protein Homology CDS 96068 97435 . - 0 ID=cds-WP_071995825.1;Parent=gene-AD08_RS13880;Dbxref=Genbank:WP_071995825.1;Name=WP_071995825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000151243.1;locus_tag=AD08_RS13880;product=MHS family MFS transporter;protein_id=WP_071995825.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 97493 98512 . - . ID=gene-AD08_RS13875;Name=AD08_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13875;old_locus_tag=AD08_1759 NZ_JHDJ01000145.1 Protein Homology CDS 97493 98512 . - 0 ID=cds-WP_000836066.1;Parent=gene-AD08_RS13875;Dbxref=Genbank:WP_000836066.1;Name=WP_000836066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416097.1;locus_tag=AD08_RS13875;product=Zn-dependent oxidoreductase;protein_id=WP_000836066.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 98524 99738 . - . ID=gene-AD08_RS13870;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=AD08_RS13870;old_locus_tag=AD08_1760 NZ_JHDJ01000145.1 Protein Homology CDS 98524 99738 . - 0 ID=cds-WP_032218629.1;Parent=gene-AD08_RS13870;Dbxref=Genbank:WP_032218629.1;Name=WP_032218629.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=AD08_RS13870;product=starvation-sensing protein RspA;protein_id=WP_032218629.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 99944 100270 . - . ID=gene-AD08_RS13865;Name=AD08_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13865;old_locus_tag=AD08_1761 NZ_JHDJ01000145.1 Protein Homology CDS 99944 100270 . - 0 ID=cds-WP_000598292.1;Parent=gene-AD08_RS13865;Dbxref=Genbank:WP_000598292.1;Name=WP_000598292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416099.1;locus_tag=AD08_RS13865;product=YnfA family protein;protein_id=WP_000598292.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 100405 100746 . + . ID=gene-AD08_RS13860;Name=AD08_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13860;old_locus_tag=AD08_1762 NZ_JHDJ01000145.1 Protein Homology CDS 100405 100746 . + 0 ID=cds-WP_000705211.1;Parent=gene-AD08_RS13860;Dbxref=Genbank:WP_000705211.1;Name=WP_000705211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416100.1;locus_tag=AD08_RS13860;product=DUF1283 family protein;protein_id=WP_000705211.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 100781 101341 . + . ID=gene-AD08_RS13855;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=AD08_RS13855;old_locus_tag=AD08_1763 NZ_JHDJ01000145.1 Protein Homology CDS 100781 101341 . + 0 ID=cds-WP_001138581.1;Parent=gene-AD08_RS13855;Dbxref=Genbank:WP_001138581.1;Name=WP_001138581.1;gbkey=CDS;gene=speG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310317.1;locus_tag=AD08_RS13855;product=spermidine N1-acetyltransferase;protein_id=WP_001138581.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 101344 102054 . - . ID=gene-AD08_RS13850;Name=AD08_RS13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13850;old_locus_tag=AD08_1764 NZ_JHDJ01000145.1 Protein Homology CDS 101344 102054 . - 0 ID=cds-WP_001443598.1;Parent=gene-AD08_RS13850;Dbxref=Genbank:WP_001443598.1;Name=WP_001443598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416102.2;locus_tag=AD08_RS13850;product=YnfC family lipoprotein;protein_id=WP_001443598.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 102162 102467 . + . ID=gene-AD08_RS13845;Name=AD08_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13845;old_locus_tag=AD08_1765 NZ_JHDJ01000145.1 Protein Homology CDS 102162 102467 . + 0 ID=cds-WP_001300836.1;Parent=gene-AD08_RS13845;Dbxref=Genbank:WP_001300836.1;Name=WP_001300836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416103.2;locus_tag=AD08_RS13845;product=DUF1161 domain-containing protein;protein_id=WP_001300836.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 102666 105092 . + . ID=gene-AD08_RS13840;Name=AD08_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13840;old_locus_tag=AD08_1766 NZ_JHDJ01000145.1 Protein Homology CDS 102666 105092 . + 0 ID=cds-WP_000041675.1;Parent=gene-AD08_RS13840;Dbxref=Genbank:WP_000041675.1;Name=WP_000041675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416104.1;locus_tag=AD08_RS13840;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_000041675.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 105153 107576 . + . ID=gene-AD08_RS13835;Name=AD08_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13835;old_locus_tag=AD08_1767 NZ_JHDJ01000145.1 Protein Homology CDS 105153 107576 . + 0 ID=cds-WP_001340362.1;Parent=gene-AD08_RS13835;Dbxref=Genbank:WP_001340362.1;Name=WP_001340362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416105.4;locus_tag=AD08_RS13835;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_001340362.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 107587 107700 . + . ID=gene-AD08_RS13830;Name=AD08_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13830;old_locus_tag=AD08_1768 NZ_JHDJ01000145.1 Protein Homology CDS 107587 107700 . + 0 ID=cds-WP_000213043.1;Parent=gene-AD08_RS13830;Dbxref=Genbank:WP_000213043.1;Name=WP_000213043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213043.1;locus_tag=AD08_RS13830;product=4Fe-4S binding protein;protein_id=WP_000213043.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 108116 108400 . + . ID=gene-AD08_RS0125760;Name=AD08_RS0125760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125760 NZ_JHDJ01000145.1 Protein Homology CDS 108116 108400 . + 0 ID=cds-WP_021577504.1;Parent=gene-AD08_RS0125760;Dbxref=Genbank:WP_021577504.1;Name=WP_021577504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203837.1;locus_tag=AD08_RS0125760;product=hypothetical protein;protein_id=WP_021577504.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 108650 109279 . + . ID=gene-AD08_RS13825;Name=AD08_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13825;old_locus_tag=AD08_1769 NZ_JHDJ01000145.1 Protein Homology CDS 108650 109279 . + 0 ID=cds-WP_032218632.1;Parent=gene-AD08_RS13825;Dbxref=Genbank:WP_032218632.1;Name=WP_032218632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309278.1;locus_tag=AD08_RS13825;product=antirepressor;protein_id=WP_032218632.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 109476 110702 . + . ID=gene-AD08_RS13820;Name=AD08_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13820;old_locus_tag=AD08_1770 NZ_JHDJ01000145.1 Protein Homology CDS 109476 110702 . + 0 ID=cds-WP_001145450.1;Parent=gene-AD08_RS13820;Dbxref=Genbank:WP_001145450.1;Name=WP_001145450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000468104.1;locus_tag=AD08_RS13820;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_001145450.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 110687 111331 . + . ID=gene-AD08_RS13815;Name=AD08_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13815;old_locus_tag=AD08_1771 NZ_JHDJ01000145.1 Protein Homology CDS 110687 111331 . + 0 ID=cds-WP_032218633.1;Parent=gene-AD08_RS13815;Dbxref=Genbank:WP_032218633.1;Name=WP_032218633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528463.1;locus_tag=AD08_RS13815;product=ParB N-terminal domain-containing protein;protein_id=WP_032218633.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 111420 111908 . - . ID=gene-AD08_RS13810;Name=AD08_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13810;old_locus_tag=AD08_1772 NZ_JHDJ01000145.1 Protein Homology CDS 111420 111908 . - 0 ID=cds-WP_001625096.1;Parent=gene-AD08_RS13810;Dbxref=Genbank:WP_001625096.1;Name=WP_001625096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625096.1;locus_tag=AD08_RS13810;product=SocA family protein;protein_id=WP_001625096.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 112095 120458 . - . ID=gene-AD08_RS13805;Name=AD08_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13805;old_locus_tag=AD08_1773 NZ_JHDJ01000145.1 Protein Homology CDS 112095 120458 . - 0 ID=cds-WP_032218635.1;Parent=gene-AD08_RS13805;Dbxref=Genbank:WP_032218635.1;Name=WP_032218635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309269.1;locus_tag=AD08_RS13805;product=hypothetical protein;protein_id=WP_032218635.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 120527 121792 . - . ID=gene-AD08_RS13800;Name=AD08_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13800;old_locus_tag=AD08_1774 NZ_JHDJ01000145.1 Protein Homology CDS 120527 121792 . - 0 ID=cds-WP_032218637.1;Parent=gene-AD08_RS13800;Dbxref=Genbank:WP_032218637.1;Name=WP_032218637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309268.1;locus_tag=AD08_RS13800;product=hypothetical protein;protein_id=WP_032218637.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 121803 122054 . - . ID=gene-AD08_RS13795;Name=AD08_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13795;old_locus_tag=AD08_1775 NZ_JHDJ01000145.1 Protein Homology CDS 121803 122054 . - 0 ID=cds-WP_000540392.1;Parent=gene-AD08_RS13795;Dbxref=Genbank:WP_000540392.1;Name=WP_000540392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309267.1;locus_tag=AD08_RS13795;product=hypothetical protein;protein_id=WP_000540392.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 122064 122375 . - . ID=gene-AD08_RS0125765;Name=AD08_RS0125765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125765 NZ_JHDJ01000145.1 Protein Homology CDS 122064 122375 . - 0 ID=cds-WP_024194148.1;Parent=gene-AD08_RS0125765;Dbxref=Genbank:WP_024194148.1;Name=WP_024194148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001391664.1;locus_tag=AD08_RS0125765;product=hypothetical protein;protein_id=WP_024194148.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 122359 122583 . - . ID=gene-AD08_RS31140;Name=AD08_RS31140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31140 NZ_JHDJ01000145.1 Protein Homology CDS 122359 122583 . - 0 ID=cds-WP_162752698.1;Parent=gene-AD08_RS31140;Dbxref=Genbank:WP_162752698.1;Name=WP_162752698.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016766.1;locus_tag=AD08_RS31140;product=hypothetical protein;protein_id=WP_162752698.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq pseudogene 122618 123169 . - . ID=gene-AD08_RS13790;Name=AD08_RS13790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS13790;old_locus_tag=AD08_1778;partial=true;pseudo=true;start_range=.,122618 NZ_JHDJ01000145.1 Protein Homology CDS 122618 123169 . - 0 ID=cds-AD08_RS13790;Parent=gene-AD08_RS13790;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192285.1;locus_tag=AD08_RS13790;partial=true;product=hypothetical protein;pseudo=true;start_range=.,122618;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 123261 123662 . - . ID=gene-AD08_RS13785;Name=AD08_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13785;old_locus_tag=AD08_1779 NZ_JHDJ01000145.1 Protein Homology CDS 123261 123662 . - 0 ID=cds-WP_050436518.1;Parent=gene-AD08_RS13785;Dbxref=Genbank:WP_050436518.1;Name=WP_050436518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309264.1;locus_tag=AD08_RS13785;product=hypothetical protein;protein_id=WP_050436518.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 123719 123859 . - . ID=gene-AD08_RS13780;Name=AD08_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13780;old_locus_tag=AD08_1780 NZ_JHDJ01000145.1 Protein Homology CDS 123719 123859 . - 0 ID=cds-WP_000078907.1;Parent=gene-AD08_RS13780;Dbxref=Genbank:WP_000078907.1;Name=WP_000078907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078907.1;locus_tag=AD08_RS13780;product=Hok/Gef family protein;protein_id=WP_000078907.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 124092 124829 . - . ID=gene-AD08_RS0125770;Name=AD08_RS0125770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125770 NZ_JHDJ01000145.1 Protein Homology CDS 124092 124829 . - 0 ID=cds-WP_032179509.1;Parent=gene-AD08_RS0125770;Dbxref=Genbank:WP_032179509.1;Name=WP_032179509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000836437.1;locus_tag=AD08_RS0125770;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_032179509.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 124956 125573 . - . ID=gene-AD08_RS13775;Name=AD08_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13775;old_locus_tag=AD08_1782 NZ_JHDJ01000145.1 Protein Homology CDS 124956 125573 . - 0 ID=cds-WP_032218641.1;Parent=gene-AD08_RS13775;Dbxref=Genbank:WP_032218641.1;Name=WP_032218641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309262.1;locus_tag=AD08_RS13775;product=hypothetical protein;protein_id=WP_032218641.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 125579 125860 . - . ID=gene-AD08_RS0125775;Name=AD08_RS0125775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125775 NZ_JHDJ01000145.1 Protein Homology CDS 125579 125860 . - 0 ID=cds-WP_000852820.1;Parent=gene-AD08_RS0125775;Dbxref=Genbank:WP_000852820.1;Name=WP_000852820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001369201.1;locus_tag=AD08_RS0125775;product=hypothetical protein;protein_id=WP_000852820.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 125875 127143 . - . ID=gene-AD08_RS13770;Name=AD08_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13770;old_locus_tag=AD08_1783 NZ_JHDJ01000145.1 Protein Homology CDS 125875 127143 . - 0 ID=cds-WP_032218644.1;Parent=gene-AD08_RS13770;Dbxref=Genbank:WP_032218644.1;Name=WP_032218644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539076.1;locus_tag=AD08_RS13770;product=host specificity protein J;protein_id=WP_032218644.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 127140 128765 . - . ID=gene-AD08_RS13765;Name=AD08_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13765;old_locus_tag=AD08_1784 NZ_JHDJ01000145.1 Protein Homology CDS 127140 128765 . - 0 ID=cds-WP_032218646.1;Parent=gene-AD08_RS13765;Dbxref=Genbank:WP_032218646.1;Name=WP_032218646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309259.2;locus_tag=AD08_RS13765;product=hypothetical protein;protein_id=WP_032218646.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 128946 129128 . - . ID=gene-AD08_RS13760;Name=AD08_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13760;old_locus_tag=AD08_1785 NZ_JHDJ01000145.1 Protein Homology CDS 128946 129128 . - 0 ID=cds-WP_000279725.1;Parent=gene-AD08_RS13760;Dbxref=Genbank:WP_000279725.1;Name=WP_000279725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539079.1;locus_tag=AD08_RS13760;product=hypothetical protein;protein_id=WP_000279725.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 129128 129598 . - . ID=gene-AD08_RS13755;Name=AD08_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13755;old_locus_tag=AD08_1786 NZ_JHDJ01000145.1 Protein Homology CDS 129128 129598 . - 0 ID=cds-WP_021565060.1;Parent=gene-AD08_RS13755;Dbxref=Genbank:WP_021565060.1;Name=WP_021565060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539080.1;locus_tag=AD08_RS13755;product=hypothetical protein;protein_id=WP_021565060.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 129689 130792 . - . ID=gene-AD08_RS13750;Name=AD08_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13750;old_locus_tag=AD08_1787 NZ_JHDJ01000145.1 Protein Homology CDS 129689 130792 . - 0 ID=cds-WP_032218648.1;Parent=gene-AD08_RS13750;Dbxref=Genbank:WP_032218648.1;Name=WP_032218648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537314.1;locus_tag=AD08_RS13750;product=YadA C-terminal domain-containing protein;protein_id=WP_032218648.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 131589 132182 . - . ID=gene-AD08_RS13745;Name=AD08_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13745;old_locus_tag=AD08_1789 NZ_JHDJ01000145.1 Protein Homology CDS 131589 132182 . - 0 ID=cds-WP_032218649.1;Parent=gene-AD08_RS13745;Dbxref=Genbank:WP_032218649.1;Name=WP_032218649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556902.1;locus_tag=AD08_RS13745;product=DUF4376 domain-containing protein;protein_id=WP_032218649.1;transl_table=11 NZ_JHDJ01000145.1 RefSeq gene 132194 132551 . - . ID=gene-AD08_RS13740;Name=AD08_RS13740;end_range=132551,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13740;old_locus_tag=AD08_1790;partial=true NZ_JHDJ01000145.1 GeneMarkS-2+ CDS 132194 132551 . - 1 ID=cds-WP_032218651.1;Parent=gene-AD08_RS13740;Dbxref=Genbank:WP_032218651.1;Name=WP_032218651.1;end_range=132551,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS13740;partial=true;product=hypothetical protein;protein_id=WP_032218651.1;transl_table=11 ##sequence-region NZ_JHDJ01000146.1 1 5156 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000146.1 RefSeq region 1 5156 . + . ID=NZ_JHDJ01000146.1:1..5156;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000146.1 RefSeq pseudogene 1 364 . - . ID=gene-AD08_RS13735;Name=AD08_RS13735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS13735;old_locus_tag=AD08_1791;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000146.1 GeneMarkS-2+ CDS 1 364 . - 0 ID=cds-AD08_RS13735;Parent=gene-AD08_RS13735;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS13735;partial=true;product=DUF4376 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000146.1 RefSeq pseudogene 655 1827 . - . ID=gene-AD08_RS0125780;Name=AD08_RS0125780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125780;partial=true;pseudo=true;start_range=.,655 NZ_JHDJ01000146.1 Protein Homology CDS 655 1827 . - 0 ID=cds-AD08_RS0125780;Parent=gene-AD08_RS0125780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000218375.1;locus_tag=AD08_RS0125780;partial=true;product=phage tail protein;pseudo=true;start_range=.,655;transl_table=11 NZ_JHDJ01000146.1 RefSeq gene 1978 2577 . - . ID=gene-AD08_RS13730;Name=AD08_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13730;old_locus_tag=AD08_1794 NZ_JHDJ01000146.1 Protein Homology CDS 1978 2577 . - 0 ID=cds-WP_032217644.1-4;Parent=gene-AD08_RS13730;Dbxref=Genbank:WP_032217644.1;Name=WP_032217644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308870.1;locus_tag=AD08_RS13730;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_032217644.1;transl_table=11 NZ_JHDJ01000146.1 RefSeq gene 2645 5152 . - . ID=gene-AD08_RS13725;Name=AD08_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13725;old_locus_tag=AD08_1795 NZ_JHDJ01000146.1 Protein Homology CDS 2645 5152 . - 0 ID=cds-WP_162752716.1-2;Parent=gene-AD08_RS13725;Dbxref=Genbank:WP_162752716.1;Name=WP_162752716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_305452.1;locus_tag=AD08_RS13725;product=host specificity protein J;protein_id=WP_162752716.1;transl_table=11 ##sequence-region NZ_JHDJ01000147.1 1 7582 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000147.1 RefSeq region 1 7582 . + . ID=NZ_JHDJ01000147.1:1..7582;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000147.1 RefSeq gene 92 292 . + . ID=gene-AD08_RS13720;Name=AD08_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13720;old_locus_tag=AD08_1796 NZ_JHDJ01000147.1 Protein Homology CDS 92 292 . + 0 ID=cds-WP_000095744.1;Parent=gene-AD08_RS13720;Dbxref=Genbank:WP_000095744.1;Name=WP_000095744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000095744.1;locus_tag=AD08_RS13720;product=YlcI/YnfO family protein;protein_id=WP_000095744.1;transl_table=11 NZ_JHDJ01000147.1 RefSeq gene 424 750 . - . ID=gene-AD08_RS13715;Name=AD08_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13715;old_locus_tag=AD08_1797 NZ_JHDJ01000147.1 Protein Homology CDS 424 750 . - 0 ID=cds-WP_032218676.1;Parent=gene-AD08_RS13715;Dbxref=Genbank:WP_032218676.1;Name=WP_032218676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828066.1;locus_tag=AD08_RS13715;product=TonB family protein;protein_id=WP_032218676.1;transl_table=11 NZ_JHDJ01000147.1 RefSeq gene 1151 1336 . - . ID=gene-AD08_RS31685;Name=AD08_RS31685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31685 NZ_JHDJ01000147.1 Protein Homology CDS 1151 1336 . - 0 ID=cds-WP_072006851.1;Parent=gene-AD08_RS31685;Dbxref=Genbank:WP_072006851.1;Name=WP_072006851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309814.1;locus_tag=AD08_RS31685;product=hypothetical protein;protein_id=WP_072006851.1;transl_table=11 NZ_JHDJ01000147.1 RefSeq gene 1558 1644 . - . ID=gene-AD08_RS0125785;Name=AD08_RS0125785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125785 NZ_JHDJ01000147.1 Protein Homology CDS 1558 1644 . - 0 ID=cds-WP_032140280.1;Parent=gene-AD08_RS0125785;Dbxref=Genbank:WP_032140280.1;Name=WP_032140280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309121.1;locus_tag=AD08_RS0125785;product=hypothetical protein;protein_id=WP_032140280.1;transl_table=11 NZ_JHDJ01000147.1 RefSeq gene 2199 2732 . - . ID=gene-AD08_RS13695;Name=AD08_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13695;old_locus_tag=AD08_1801 NZ_JHDJ01000147.1 Protein Homology CDS 2199 2732 . - 0 ID=cds-WP_000992072.1;Parent=gene-AD08_RS13695;Dbxref=Genbank:WP_000992072.1;Name=WP_000992072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309123.1;locus_tag=AD08_RS13695;product=lysozyme;protein_id=WP_000992072.1;transl_table=11 NZ_JHDJ01000147.1 RefSeq gene 2838 3110 . + . ID=gene-AD08_RS13690;Name=AD08_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13690;old_locus_tag=AD08_1802 NZ_JHDJ01000147.1 Protein Homology CDS 2838 3110 . + 0 ID=cds-WP_000369850.1;Parent=gene-AD08_RS13690;Dbxref=Genbank:WP_000369850.1;Name=WP_000369850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000369850.1;locus_tag=AD08_RS13690;product=hypothetical protein;protein_id=WP_000369850.1;transl_table=11 NZ_JHDJ01000147.1 RefSeq gene 3076 3420 . - . ID=gene-AD08_RS13685;Name=AD08_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13685;old_locus_tag=AD08_1803 NZ_JHDJ01000147.1 Protein Homology CDS 3076 3420 . - 0 ID=cds-WP_000193278.1;Parent=gene-AD08_RS13685;Dbxref=Genbank:WP_000193278.1;Name=WP_000193278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235607.1;locus_tag=AD08_RS13685;product=YdfR family protein;protein_id=WP_000193278.1;transl_table=11 NZ_JHDJ01000147.1 RefSeq gene 3425 3640 . - . ID=gene-AD08_RS13680;Name=AD08_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13680;old_locus_tag=AD08_1804 NZ_JHDJ01000147.1 Protein Homology CDS 3425 3640 . - 0 ID=cds-WP_000284510.1-2;Parent=gene-AD08_RS13680;Dbxref=Genbank:WP_000284510.1;Name=WP_000284510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309239.1;locus_tag=AD08_RS13680;product=holin;protein_id=WP_000284510.1;transl_table=11 NZ_JHDJ01000147.1 RefSeq gene 3791 5647 . - . ID=gene-AD08_RS13675;Name=AD08_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13675;old_locus_tag=AD08_1805 NZ_JHDJ01000147.1 Protein Homology CDS 3791 5647 . - 0 ID=cds-WP_032218679.1;Parent=gene-AD08_RS13675;Dbxref=Genbank:WP_032218679.1;Name=WP_032218679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309808.1;locus_tag=AD08_RS13675;product=SASA family carbohydrate esterase;protein_id=WP_032218679.1;transl_table=11 NZ_JHDJ01000147.1 RefSeq gene 5908 6243 . + . ID=gene-AD08_RS0125795;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=AD08_RS0125795 NZ_JHDJ01000147.1 Protein Homology CDS 5908 6243 . + 0 ID=cds-WP_000871291.1;Parent=gene-AD08_RS0125795;Dbxref=Genbank:WP_000871291.1;Name=WP_000871291.1;gbkey=CDS;gene=iraM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707425.1;locus_tag=AD08_RS0125795;product=anti-adapter protein IraM;protein_id=WP_000871291.1;transl_table=11 NZ_JHDJ01000147.1 RefSeq gene 6535 6611 . - . ID=gene-AD08_RS13670;Name=AD08_RS13670;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS13670;old_locus_tag=AD08_1807 NZ_JHDJ01000147.1 tRNAscan-SE tRNA 6535 6611 . - . ID=rna-AD08_RS13670;Parent=gene-AD08_RS13670;anticodon=(pos:complement(6575..6577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS13670;product=tRNA-Arg NZ_JHDJ01000147.1 tRNAscan-SE exon 6535 6611 . - . ID=exon-AD08_RS13670-1;Parent=rna-AD08_RS13670;anticodon=(pos:complement(6575..6577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS13670;product=tRNA-Arg NZ_JHDJ01000147.1 RefSeq gene 6625 6701 . - . ID=gene-AD08_RS13665;Name=AD08_RS13665;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS13665;old_locus_tag=AD08_1808 NZ_JHDJ01000147.1 tRNAscan-SE tRNA 6625 6701 . - . ID=rna-AD08_RS13665;Parent=gene-AD08_RS13665;anticodon=(pos:complement(6665..6667));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS13665;product=tRNA-Arg NZ_JHDJ01000147.1 tRNAscan-SE exon 6625 6701 . - . ID=exon-AD08_RS13665-1;Parent=rna-AD08_RS13665;anticodon=(pos:complement(6665..6667));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS13665;product=tRNA-Arg NZ_JHDJ01000147.1 RefSeq gene 6709 6784 . - . ID=gene-AD08_RS13660;Name=AD08_RS13660;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS13660;old_locus_tag=AD08_1809 NZ_JHDJ01000147.1 tRNAscan-SE tRNA 6709 6784 . - . ID=rna-AD08_RS13660;Parent=gene-AD08_RS13660;anticodon=(pos:complement(6749..6751));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS13660;product=tRNA-Ile NZ_JHDJ01000147.1 tRNAscan-SE exon 6709 6784 . - . ID=exon-AD08_RS13660-1;Parent=rna-AD08_RS13660;anticodon=(pos:complement(6749..6751));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS13660;product=tRNA-Ile NZ_JHDJ01000147.1 RefSeq gene 6834 7582 . - . ID=gene-AD08_RS13655;Name=AD08_RS13655;end_range=7582,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13655;old_locus_tag=AD08_1810;partial=true NZ_JHDJ01000147.1 Protein Homology CDS 6834 7582 . - 2 ID=cds-WP_032218681.1;Parent=gene-AD08_RS13655;Dbxref=Genbank:WP_032218681.1;Name=WP_032218681.1;end_range=7582,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309807.1;locus_tag=AD08_RS13655;partial=true;product=site-specific DNA-methyltransferase;protein_id=WP_032218681.1;transl_table=11 ##sequence-region NZ_JHDJ01000148.1 1 109229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000148.1 RefSeq region 1 109229 . + . ID=NZ_JHDJ01000148.1:1..109229;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000148.1 RefSeq gene 47 355 . + . ID=gene-AD08_RS13650;Name=AD08_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13650;old_locus_tag=AD08_1811 NZ_JHDJ01000148.1 Protein Homology CDS 47 355 . + 0 ID=cds-WP_032218101.1-2;Parent=gene-AD08_RS13650;Dbxref=Genbank:WP_032218101.1;Name=WP_032218101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005286394.1;locus_tag=AD08_RS13650;product=helix-turn-helix transcriptional regulator;protein_id=WP_032218101.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 410 655 . - . ID=gene-AD08_RS13645;Name=AD08_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13645;old_locus_tag=AD08_1812 NZ_JHDJ01000148.1 Protein Homology CDS 410 655 . - 0 ID=cds-WP_001624507.1-2;Parent=gene-AD08_RS13645;Dbxref=Genbank:WP_001624507.1;Name=WP_001624507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001624507.1;locus_tag=AD08_RS13645;product=hypothetical protein;protein_id=WP_001624507.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 654 1328 . + . ID=gene-AD08_RS13640;Name=AD08_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13640;old_locus_tag=AD08_1813 NZ_JHDJ01000148.1 Protein Homology CDS 654 1328 . + 0 ID=cds-WP_032218099.1-2;Parent=gene-AD08_RS13640;Dbxref=Genbank:WP_032218099.1;Name=WP_032218099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060692.1;locus_tag=AD08_RS13640;product=DUF4145 domain-containing protein;protein_id=WP_032218099.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 1361 1792 . - . ID=gene-AD08_RS13635;Name=AD08_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13635;old_locus_tag=AD08_1814 NZ_JHDJ01000148.1 Protein Homology CDS 1361 1792 . - 0 ID=cds-WP_000196185.1;Parent=gene-AD08_RS13635;Dbxref=Genbank:WP_000196185.1;Name=WP_000196185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151118.1;locus_tag=AD08_RS13635;product=DUF977 family protein;protein_id=WP_000196185.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 1808 2578 . - . ID=gene-AD08_RS13630;Name=AD08_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13630;old_locus_tag=AD08_1815 NZ_JHDJ01000148.1 Protein Homology CDS 1808 2578 . - 0 ID=cds-WP_032182512.1;Parent=gene-AD08_RS13630;Dbxref=Genbank:WP_032182512.1;Name=WP_032182512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001504535.1;locus_tag=AD08_RS13630;product=DUF1627 domain-containing protein;protein_id=WP_032182512.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 2604 3344 . - . ID=gene-AD08_RS13625;Name=AD08_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13625;old_locus_tag=AD08_1816 NZ_JHDJ01000148.1 Protein Homology CDS 2604 3344 . - 0 ID=cds-WP_021571292.1;Parent=gene-AD08_RS13625;Dbxref=Genbank:WP_021571292.1;Name=WP_021571292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309972.1;locus_tag=AD08_RS13625;product=ATP-binding protein;protein_id=WP_021571292.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 3351 4358 . - . ID=gene-AD08_RS13620;Name=AD08_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13620;old_locus_tag=AD08_1817 NZ_JHDJ01000148.1 Protein Homology CDS 3351 4358 . - 0 ID=cds-WP_000259524.1;Parent=gene-AD08_RS13620;Dbxref=Genbank:WP_000259524.1;Name=WP_000259524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000259521.1;locus_tag=AD08_RS13620;product=hypothetical protein;protein_id=WP_000259524.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 4460 4678 . - . ID=gene-AD08_RS13615;Name=AD08_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13615;old_locus_tag=AD08_1818 NZ_JHDJ01000148.1 Protein Homology CDS 4460 4678 . - 0 ID=cds-WP_000438870.1;Parent=gene-AD08_RS13615;Dbxref=Genbank:WP_000438870.1;Name=WP_000438870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000438870.1;locus_tag=AD08_RS13615;product=hypothetical protein;protein_id=WP_000438870.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 4693 4989 . - . ID=gene-AD08_RS13610;Name=AD08_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13610;old_locus_tag=AD08_1819 NZ_JHDJ01000148.1 Protein Homology CDS 4693 4989 . - 0 ID=cds-WP_000438525.1;Parent=gene-AD08_RS13610;Dbxref=Genbank:WP_000438525.1;Name=WP_000438525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000438525.1;locus_tag=AD08_RS13610;product=hypothetical protein;protein_id=WP_000438525.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 5128 5328 . - . ID=gene-AD08_RS0125805;Name=AD08_RS0125805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125805 NZ_JHDJ01000148.1 Protein Homology CDS 5128 5328 . - 0 ID=cds-WP_000437871.1;Parent=gene-AD08_RS0125805;Dbxref=Genbank:WP_000437871.1;Name=WP_000437871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308302.1;locus_tag=AD08_RS0125805;product=hypothetical protein;protein_id=WP_000437871.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 5429 6142 . + . ID=gene-AD08_RS13605;Name=AD08_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13605;old_locus_tag=AD08_1820 NZ_JHDJ01000148.1 Protein Homology CDS 5429 6142 . + 0 ID=cds-WP_001274760.1;Parent=gene-AD08_RS13605;Dbxref=Genbank:WP_001274760.1;Name=WP_001274760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308301.1;locus_tag=AD08_RS13605;product=LexA family transcriptional regulator;protein_id=WP_001274760.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 6189 6731 . + . ID=gene-AD08_RS0125810;Name=AD08_RS0125810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125810 NZ_JHDJ01000148.1 Protein Homology CDS 6189 6731 . + 0 ID=cds-WP_001074607.1;Parent=gene-AD08_RS0125810;Dbxref=Genbank:WP_001074607.1;Name=WP_001074607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383046.1;locus_tag=AD08_RS0125810;product=hypothetical protein;protein_id=WP_001074607.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 6719 7495 . + . ID=gene-AD08_RS13600;Name=AD08_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13600;old_locus_tag=AD08_1822 NZ_JHDJ01000148.1 Protein Homology CDS 6719 7495 . + 0 ID=cds-WP_000528776.1;Parent=gene-AD08_RS13600;Dbxref=Genbank:WP_000528776.1;Name=WP_000528776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528775.1;locus_tag=AD08_RS13600;product=DUF1828 domain-containing protein;protein_id=WP_000528776.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 7991 8374 . + . ID=gene-AD08_RS13595;Name=AD08_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13595;old_locus_tag=AD08_1824 NZ_JHDJ01000148.1 Protein Homology CDS 7991 8374 . + 0 ID=cds-WP_000198438.1;Parent=gene-AD08_RS13595;Dbxref=Genbank:WP_000198438.1;Name=WP_000198438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001479835.1;locus_tag=AD08_RS13595;product=antitermination protein;protein_id=WP_000198438.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 8378 9091 . + . ID=gene-AD08_RS31690;Name=AD08_RS31690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31690;old_locus_tag=AD08_1825 NZ_JHDJ01000148.1 GeneMarkS-2+ CDS 8378 9091 . + 0 ID=cds-WP_000211196.1;Parent=gene-AD08_RS31690;Dbxref=Genbank:WP_000211196.1;Name=WP_000211196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS31690;product=hypothetical protein;protein_id=WP_000211196.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 9123 9482 . + . ID=gene-AD08_RS13585;Name=AD08_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13585;old_locus_tag=AD08_1826 NZ_JHDJ01000148.1 Protein Homology CDS 9123 9482 . + 0 ID=cds-WP_001005961.1;Parent=gene-AD08_RS13585;Dbxref=Genbank:WP_001005961.1;Name=WP_001005961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005962.1;locus_tag=AD08_RS13585;product=hypothetical protein;protein_id=WP_001005961.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 9451 9660 . - . ID=gene-AD08_RS13580;Name=AD08_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13580;old_locus_tag=AD08_1827 NZ_JHDJ01000148.1 Protein Homology CDS 9451 9660 . - 0 ID=cds-WP_000189937.1;Parent=gene-AD08_RS13580;Dbxref=Genbank:WP_000189937.1;Name=WP_000189937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000189936.1;locus_tag=AD08_RS13580;product=hypothetical protein;protein_id=WP_000189937.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 10117 10338 . + . ID=gene-AD08_RS13575;Name=kil;gbkey=Gene;gene=kil;gene_biotype=protein_coding;locus_tag=AD08_RS13575;old_locus_tag=AD08_1828 NZ_JHDJ01000148.1 Protein Homology CDS 10117 10338 . + 0 ID=cds-WP_000560214.1;Parent=gene-AD08_RS13575;Dbxref=Genbank:WP_000560214.1;Name=WP_000560214.1;Note=Rac prophage Kil protein%3B Kil overexpression leads to morphological defects and inhibits cell division;gbkey=CDS;gene=kil;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560214.1;locus_tag=AD08_RS13575;product=cell division protein FtsZ;protein_id=WP_000560214.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 10422 10808 . + . ID=gene-AD08_RS13570;Name=AD08_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13570;old_locus_tag=AD08_1829 NZ_JHDJ01000148.1 Protein Homology CDS 10422 10808 . + 0 ID=cds-WP_000660958.1;Parent=gene-AD08_RS13570;Dbxref=Genbank:WP_000660958.1;Name=WP_000660958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000660961.1;locus_tag=AD08_RS13570;product=hypothetical protein;protein_id=WP_000660958.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 10916 12988 . + . ID=gene-AD08_RS13565;Name=AD08_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13565;old_locus_tag=AD08_1830 NZ_JHDJ01000148.1 Protein Homology CDS 10916 12988 . + 0 ID=cds-WP_021571294.1;Parent=gene-AD08_RS13565;Dbxref=Genbank:WP_021571294.1;Name=WP_021571294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001271580.1;locus_tag=AD08_RS13565;product=hypothetical protein;protein_id=WP_021571294.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 12985 13281 . + . ID=gene-AD08_RS13560;Name=AD08_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13560;old_locus_tag=AD08_1831 NZ_JHDJ01000148.1 Protein Homology CDS 12985 13281 . + 0 ID=cds-WP_000995032.1;Parent=gene-AD08_RS13560;Dbxref=Genbank:WP_000995032.1;Name=WP_000995032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309203.2;locus_tag=AD08_RS13560;product=host-nuclease inhibitor protein Gam;protein_id=WP_000995032.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 13287 14072 . + . ID=gene-AD08_RS13555;Name=bet;gbkey=Gene;gene=bet;gene_biotype=protein_coding;locus_tag=AD08_RS13555;old_locus_tag=AD08_1832 NZ_JHDJ01000148.1 Protein Homology CDS 13287 14072 . + 0 ID=cds-WP_000100829.1;Parent=gene-AD08_RS13555;Dbxref=Genbank:WP_000100829.1;Name=WP_000100829.1;gbkey=CDS;gene=bet;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309202.1;locus_tag=AD08_RS13555;product=phage recombination protein Bet;protein_id=WP_000100829.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 14069 14746 . + . ID=gene-AD08_RS13550;Name=AD08_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13550;old_locus_tag=AD08_1833 NZ_JHDJ01000148.1 Protein Homology CDS 14069 14746 . + 0 ID=cds-WP_000186787.1;Parent=gene-AD08_RS13550;Dbxref=Genbank:WP_000186787.1;Name=WP_000186787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308836.1;locus_tag=AD08_RS13550;product=YqaJ viral recombinase family protein;protein_id=WP_000186787.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 14798 15049 . + . ID=gene-AD08_RS13545;Name=AD08_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13545;old_locus_tag=AD08_1834 NZ_JHDJ01000148.1 Protein Homology CDS 14798 15049 . + 0 ID=cds-WP_000497817.1;Parent=gene-AD08_RS13545;Dbxref=Genbank:WP_000497817.1;Name=WP_000497817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563186.1;locus_tag=AD08_RS13545;product=DUF4222 domain-containing protein;protein_id=WP_000497817.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 15009 15455 . + . ID=gene-AD08_RS28785;Name=AD08_RS28785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS28785 NZ_JHDJ01000148.1 Protein Homology CDS 15009 15455 . + 0 ID=cds-WP_126502590.1;Parent=gene-AD08_RS28785;Dbxref=Genbank:WP_126502590.1;Name=WP_126502590.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024139.1;locus_tag=AD08_RS28785;product=helix-turn-helix domain-containing protein;protein_id=WP_126502590.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 15311 16474 . + . ID=gene-AD08_RS13540;Name=AD08_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13540;old_locus_tag=AD08_1835 NZ_JHDJ01000148.1 Protein Homology CDS 15311 16474 . + 0 ID=cds-WP_032218686.1;Parent=gene-AD08_RS13540;Dbxref=Genbank:WP_032218686.1;Name=WP_032218686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415069.1;locus_tag=AD08_RS13540;product=site-specific integrase;protein_id=WP_032218686.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 16512 17066 . + . ID=gene-AD08_RS13535;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=AD08_RS13535;old_locus_tag=AD08_1836 NZ_JHDJ01000148.1 Protein Homology CDS 16512 17066 . + 0 ID=cds-WP_000254426.1;Parent=gene-AD08_RS13535;Dbxref=Genbank:WP_000254426.1;Name=WP_000254426.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000254425.1;locus_tag=AD08_RS13535;product=dimethylsulfoxide reductase subunit B;protein_id=WP_000254426.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 17068 17922 . + . ID=gene-AD08_RS13530;Name=AD08_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13530;old_locus_tag=AD08_1837 NZ_JHDJ01000148.1 Protein Homology CDS 17068 17922 . + 0 ID=cds-WP_000526503.1;Parent=gene-AD08_RS13530;Dbxref=Genbank:WP_000526503.1;Name=WP_000526503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416107.1;locus_tag=AD08_RS13530;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WP_000526503.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 17965 18579 . + . ID=gene-AD08_RS13525;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=AD08_RS13525;old_locus_tag=AD08_1838 NZ_JHDJ01000148.1 Protein Homology CDS 17965 18579 . + 0 ID=cds-WP_000148710.1;Parent=gene-AD08_RS13525;Dbxref=Genbank:WP_000148710.1;Name=WP_000148710.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707489.2;locus_tag=AD08_RS13525;product=Tat proofreading chaperone DmsD;protein_id=WP_000148710.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 18738 20030 . + . ID=gene-AD08_RS13520;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=AD08_RS13520;old_locus_tag=AD08_1839 NZ_JHDJ01000148.1 Protein Homology CDS 18738 20030 . + 0 ID=cds-WP_001315626.1;Parent=gene-AD08_RS13520;Dbxref=Genbank:WP_001315626.1;Name=WP_001315626.1;gbkey=CDS;gene=clcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001315626.1;locus_tag=AD08_RS13520;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_001315626.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 19983 20678 . - . ID=gene-AD08_RS13515;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AD08_RS13515;old_locus_tag=AD08_1840 NZ_JHDJ01000148.1 Protein Homology CDS 19983 20678 . - 0 ID=cds-WP_000919231.1;Parent=gene-AD08_RS13515;Dbxref=Genbank:WP_000919231.1;Name=WP_000919231.1;gbkey=CDS;gene=bioD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310326.2;locus_tag=AD08_RS13515;product=ATP-dependent dethiobiotin synthetase BioD;protein_id=WP_000919231.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 20803 22023 . - . ID=gene-AD08_RS13510;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=AD08_RS13510;old_locus_tag=AD08_1841 NZ_JHDJ01000148.1 Protein Homology CDS 20803 22023 . - 0 ID=cds-WP_000225262.1;Parent=gene-AD08_RS13510;Dbxref=Genbank:WP_000225262.1;Name=WP_000225262.1;gbkey=CDS;gene=mlc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416111.1;locus_tag=AD08_RS13510;product=DNA-binding transcriptional repressor Mlc;protein_id=WP_000225262.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 22158 23051 . - . ID=gene-AD08_RS13505;Name=AD08_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13505;old_locus_tag=AD08_1842 NZ_JHDJ01000148.1 Protein Homology CDS 22158 23051 . - 0 ID=cds-WP_032218688.1;Parent=gene-AD08_RS13505;Dbxref=Genbank:WP_032218688.1;Name=WP_032218688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416112.1;locus_tag=AD08_RS13505;product=LysR family transcriptional regulator;protein_id=WP_032218688.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 23158 24411 . + . ID=gene-AD08_RS13500;Name=AD08_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13500;old_locus_tag=AD08_1843 NZ_JHDJ01000148.1 Protein Homology CDS 23158 24411 . + 0 ID=cds-WP_000091840.1;Parent=gene-AD08_RS13500;Dbxref=Genbank:WP_000091840.1;Name=WP_000091840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416113.1;locus_tag=AD08_RS13500;product=MFS transporter;protein_id=WP_000091840.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 24808 25143 . + . ID=gene-AD08_RS13495;Name=AD08_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13495;old_locus_tag=AD08_1844 NZ_JHDJ01000148.1 Protein Homology CDS 24808 25143 . + 0 ID=cds-WP_000743957.1;Parent=gene-AD08_RS13495;Dbxref=Genbank:WP_000743957.1;Name=WP_000743957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416114.2;locus_tag=AD08_RS13495;product=acid shock protein;protein_id=WP_000743957.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 25236 25319 . + . ID=gene-AD08_RS0125815;Name=AD08_RS0125815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125815 NZ_JHDJ01000148.1 Protein Homology CDS 25236 25319 . + 0 ID=cds-WP_000233090.1;Parent=gene-AD08_RS0125815;Dbxref=Genbank:WP_000233090.1;Name=WP_000233090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165320.1;locus_tag=AD08_RS0125815;product=hypothetical protein;protein_id=WP_000233090.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 25419 26240 . + . ID=gene-AD08_RS13490;Name=AD08_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13490;old_locus_tag=AD08_1845 NZ_JHDJ01000148.1 Protein Homology CDS 25419 26240 . + 0 ID=cds-WP_001260865.1;Parent=gene-AD08_RS13490;Dbxref=Genbank:WP_001260865.1;Name=WP_001260865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416115.1;locus_tag=AD08_RS13490;product=serine protease;protein_id=WP_001260865.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 26279 26608 . - . ID=gene-AD08_RS13485;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=AD08_RS13485;old_locus_tag=AD08_1846 NZ_JHDJ01000148.1 Protein Homology CDS 26279 26608 . - 0 ID=cds-WP_001454927.1;Parent=gene-AD08_RS13485;Dbxref=Genbank:WP_001454927.1;Name=WP_001454927.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310332.1;locus_tag=AD08_RS13485;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_001454927.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 26595 26960 . - . ID=gene-AD08_RS13480;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=AD08_RS13480;old_locus_tag=AD08_1847 NZ_JHDJ01000148.1 Protein Homology CDS 26595 26960 . - 0 ID=cds-WP_000276149.1;Parent=gene-AD08_RS13480;Dbxref=Genbank:WP_000276149.1;Name=WP_000276149.1;gbkey=CDS;gene=mdtJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310333.1;locus_tag=AD08_RS13480;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000276149.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 28274 28555 . - . ID=gene-AD08_RS13470;Name=AD08_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13470;old_locus_tag=AD08_1850 NZ_JHDJ01000148.1 Protein Homology CDS 28274 28555 . - 0 ID=cds-WP_000133421.1;Parent=gene-AD08_RS13470;Dbxref=Genbank:WP_000133421.1;Name=WP_000133421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309626.1;locus_tag=AD08_RS13470;product=hypothetical protein;protein_id=WP_000133421.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 28569 30230 . - . ID=gene-AD08_RS13465;Name=AD08_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13465;old_locus_tag=AD08_1851 NZ_JHDJ01000148.1 Protein Homology CDS 28569 30230 . - 0 ID=cds-WP_032218690.1;Parent=gene-AD08_RS13465;Dbxref=Genbank:WP_032218690.1;Name=WP_032218690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309625.1;locus_tag=AD08_RS13465;product=terminase large subunit;protein_id=WP_032218690.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 30214 30570 . - . ID=gene-AD08_RS13460;Name=AD08_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13460;old_locus_tag=AD08_1852 NZ_JHDJ01000148.1 Protein Homology CDS 30214 30570 . - 0 ID=cds-WP_000113645.1;Parent=gene-AD08_RS13460;Dbxref=Genbank:WP_000113645.1;Name=WP_000113645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309624.1;locus_tag=AD08_RS13460;product=phage terminase small subunit P27 family;protein_id=WP_000113645.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 30694 30876 . - . ID=gene-AD08_RS13455;Name=AD08_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13455;old_locus_tag=AD08_1853 NZ_JHDJ01000148.1 Protein Homology CDS 30694 30876 . - 0 ID=cds-WP_024166058.1;Parent=gene-AD08_RS13455;Dbxref=Genbank:WP_024166058.1;Name=WP_024166058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707054.1;locus_tag=AD08_RS13455;product=hypothetical protein;protein_id=WP_024166058.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 30860 31300 . - . ID=gene-AD08_RS0125825;Name=AD08_RS0125825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125825 NZ_JHDJ01000148.1 Protein Homology CDS 30860 31300 . - 0 ID=cds-WP_001145908.1;Parent=gene-AD08_RS0125825;Dbxref=Genbank:WP_001145908.1;Name=WP_001145908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309622.1;locus_tag=AD08_RS0125825;product=HNH endonuclease;protein_id=WP_001145908.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 31300 31596 . - . ID=gene-AD08_RS13450;Name=AD08_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13450;old_locus_tag=AD08_1855 NZ_JHDJ01000148.1 Protein Homology CDS 31300 31596 . - 0 ID=cds-WP_032218693.1;Parent=gene-AD08_RS13450;Dbxref=Genbank:WP_032218693.1;Name=WP_032218693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309621.1;locus_tag=AD08_RS13450;product=bacteriophage protein;protein_id=WP_032218693.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 31593 31931 . - . ID=gene-AD08_RS0125830;Name=AD08_RS0125830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125830 NZ_JHDJ01000148.1 Protein Homology CDS 31593 31931 . - 0 ID=cds-WP_016241300.1;Parent=gene-AD08_RS0125830;Dbxref=Genbank:WP_016241300.1;Name=WP_016241300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309620.1;locus_tag=AD08_RS0125830;product=phage head closure protein;protein_id=WP_016241300.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 31928 33139 . - . ID=gene-AD08_RS13445;Name=AD08_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13445;old_locus_tag=AD08_1857 NZ_JHDJ01000148.1 Protein Homology CDS 31928 33139 . - 0 ID=cds-WP_000267608.1;Parent=gene-AD08_RS13445;Dbxref=Genbank:WP_000267608.1;Name=WP_000267608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707050.1;locus_tag=AD08_RS13445;product=phage portal protein;protein_id=WP_000267608.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 33141 33713 . - . ID=gene-AD08_RS13440;Name=AD08_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13440;old_locus_tag=AD08_1858 NZ_JHDJ01000148.1 Protein Homology CDS 33141 33713 . - 0 ID=cds-WP_077699019.1;Parent=gene-AD08_RS13440;Dbxref=Genbank:WP_077699019.1;Name=WP_077699019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707049.2;locus_tag=AD08_RS13440;product=HK97 family phage prohead protease;protein_id=WP_077699019.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 33753 34910 . - . ID=gene-AD08_RS13435;Name=AD08_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13435;old_locus_tag=AD08_1859 NZ_JHDJ01000148.1 Protein Homology CDS 33753 34910 . - 0 ID=cds-WP_032218696.1;Parent=gene-AD08_RS13435;Dbxref=Genbank:WP_032218696.1;Name=WP_032218696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309617.1;locus_tag=AD08_RS13435;product=phage major capsid protein;protein_id=WP_032218696.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 35198 35470 . - . ID=gene-AD08_RS0125835;Name=AD08_RS0125835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125835 NZ_JHDJ01000148.1 Protein Homology CDS 35198 35470 . - 0 ID=cds-WP_032218699.1;Parent=gene-AD08_RS0125835;Dbxref=Genbank:WP_032218699.1;Name=WP_032218699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233308.1;locus_tag=AD08_RS0125835;product=PerC family transcriptional regulator;protein_id=WP_032218699.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 35481 35891 . - . ID=gene-AD08_RS13430;Name=AD08_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13430;old_locus_tag=AD08_1861 NZ_JHDJ01000148.1 Protein Homology CDS 35481 35891 . - 0 ID=cds-WP_032218701.1;Parent=gene-AD08_RS13430;Dbxref=Genbank:WP_032218701.1;Name=WP_032218701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309614.1;locus_tag=AD08_RS13430;product=single-stranded DNA-binding protein;protein_id=WP_032218701.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 35901 36089 . - . ID=gene-AD08_RS0125840;Name=AD08_RS0125840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125840 NZ_JHDJ01000148.1 Protein Homology CDS 35901 36089 . - 0 ID=cds-WP_001368652.1;Parent=gene-AD08_RS0125840;Dbxref=Genbank:WP_001368652.1;Name=WP_001368652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368652.1;locus_tag=AD08_RS0125840;product=hypothetical protein;protein_id=WP_001368652.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 36203 36454 . - . ID=gene-AD08_RS13425;Name=AD08_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13425;old_locus_tag=AD08_1863 NZ_JHDJ01000148.1 Protein Homology CDS 36203 36454 . - 0 ID=cds-WP_000192402.1;Parent=gene-AD08_RS13425;Dbxref=Genbank:WP_000192402.1;Name=WP_000192402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309613.1;locus_tag=AD08_RS13425;product=hypothetical protein;protein_id=WP_000192402.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 36655 38055 . - . ID=gene-AD08_RS13420;Name=AD08_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13420;old_locus_tag=AD08_1864 NZ_JHDJ01000148.1 Protein Homology CDS 36655 38055 . - 0 ID=cds-WP_000833618.1;Parent=gene-AD08_RS13420;Dbxref=Genbank:WP_000833618.1;Name=WP_000833618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833619.1;locus_tag=AD08_RS13420;product=AAA family ATPase;protein_id=WP_000833618.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 38052 38351 . - . ID=gene-AD08_RS13415;Name=AD08_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13415;old_locus_tag=AD08_1865 NZ_JHDJ01000148.1 Protein Homology CDS 38052 38351 . - 0 ID=cds-WP_032218704.1;Parent=gene-AD08_RS13415;Dbxref=Genbank:WP_032218704.1;Name=WP_032218704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707045.1;locus_tag=AD08_RS13415;product=DUF4222 domain-containing protein;protein_id=WP_032218704.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 38357 38590 . - . ID=gene-AD08_RS13410;Name=AD08_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13410;old_locus_tag=AD08_1866 NZ_JHDJ01000148.1 Protein Homology CDS 38357 38590 . - 0 ID=cds-WP_001204985.1;Parent=gene-AD08_RS13410;Dbxref=Genbank:WP_001204985.1;Name=WP_001204985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439238.1;locus_tag=AD08_RS13410;product=hypothetical protein;protein_id=WP_001204985.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 38583 39050 . - . ID=gene-AD08_RS13405;Name=AD08_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13405;old_locus_tag=AD08_1867 NZ_JHDJ01000148.1 Protein Homology CDS 38583 39050 . - 0 ID=cds-WP_000551671.1;Parent=gene-AD08_RS13405;Dbxref=Genbank:WP_000551671.1;Name=WP_000551671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551667.1;locus_tag=AD08_RS13405;product=hypothetical protein;protein_id=WP_000551671.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 39040 39252 . - . ID=gene-AD08_RS13400;Name=AD08_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13400;old_locus_tag=AD08_1868 NZ_JHDJ01000148.1 Protein Homology CDS 39040 39252 . - 0 ID=cds-WP_000609225.1;Parent=gene-AD08_RS13400;Dbxref=Genbank:WP_000609225.1;Name=WP_000609225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609225.1;locus_tag=AD08_RS13400;product=hypothetical protein;protein_id=WP_000609225.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 39245 39442 . - . ID=gene-AD08_RS0125845;Name=AD08_RS0125845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125845 NZ_JHDJ01000148.1 Protein Homology CDS 39245 39442 . - 0 ID=cds-WP_000226782.1;Parent=gene-AD08_RS0125845;Dbxref=Genbank:WP_000226782.1;Name=WP_000226782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000226782.1;locus_tag=AD08_RS0125845;product=host cell division inhibitor Icd-like protein;protein_id=WP_000226782.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 39637 39816 . + . ID=gene-AD08_RS31695;Name=AD08_RS31695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31695 NZ_JHDJ01000148.1 GeneMarkS-2+ CDS 39637 39816 . + 0 ID=cds-WP_000201456.1;Parent=gene-AD08_RS31695;Dbxref=Genbank:WP_000201456.1;Name=WP_000201456.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS31695;product=hypothetical protein;protein_id=WP_000201456.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 39941 40267 . + . ID=gene-AD08_RS31700;Name=AD08_RS31700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31700 NZ_JHDJ01000148.1 GeneMarkS-2+ CDS 39941 40267 . + 0 ID=cds-WP_153037810.1;Parent=gene-AD08_RS31700;Dbxref=Genbank:WP_153037810.1;Name=WP_153037810.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS31700;product=hypothetical protein;protein_id=WP_153037810.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 40317 40505 . - . ID=gene-AD08_RS0125850;Name=AD08_RS0125850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125850 NZ_JHDJ01000148.1 Protein Homology CDS 40317 40505 . - 0 ID=cds-WP_000953272.1;Parent=gene-AD08_RS0125850;Dbxref=Genbank:WP_000953272.1;Name=WP_000953272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001443601.1;locus_tag=AD08_RS0125850;product=AlpA family transcriptional regulator;protein_id=WP_000953272.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 40873 42102 . - . ID=gene-AD08_RS13390;Name=AD08_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13390;old_locus_tag=AD08_1871 NZ_JHDJ01000148.1 Protein Homology CDS 40873 42102 . - 0 ID=cds-WP_000085279.1;Parent=gene-AD08_RS13390;Dbxref=Genbank:WP_000085279.1;Name=WP_000085279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309601.1;locus_tag=AD08_RS13390;product=site-specific integrase;protein_id=WP_000085279.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq pseudogene 42279 43184 . + . ID=gene-AD08_RS13385;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=pseudogene;locus_tag=AD08_RS13385;old_locus_tag=AD08_1873;partial=true;pseudo=true;start_range=.,42279 NZ_JHDJ01000148.1 Protein Homology CDS 42279 43184 . + 0 ID=cds-AD08_RS13385;Parent=gene-AD08_RS13385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=tqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416118.1;locus_tag=AD08_RS13385;partial=true;product=AI-2 transporter TqsA;pseudo=true;start_range=.,42279;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 43209 44597 . - . ID=gene-AD08_RS13380;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=AD08_RS13380;old_locus_tag=AD08_1874 NZ_JHDJ01000148.1 Protein Homology CDS 43209 44597 . - 0 ID=cds-WP_000014036.1;Parent=gene-AD08_RS13380;Dbxref=Genbank:WP_000014036.1;Name=WP_000014036.1;gbkey=CDS;gene=pntB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=AD08_RS13380;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014036.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 44608 46140 . - . ID=gene-AD08_RS13375;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=AD08_RS13375;old_locus_tag=AD08_1875 NZ_JHDJ01000148.1 Protein Homology CDS 44608 46140 . - 0 ID=cds-WP_001300486.1;Parent=gene-AD08_RS13375;Dbxref=Genbank:WP_001300486.1;Name=WP_001300486.1;gbkey=CDS;gene=pntA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416120.1;locus_tag=AD08_RS13375;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001300486.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 46664 47608 . + . ID=gene-AD08_RS13370;Name=AD08_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13370;old_locus_tag=AD08_1876 NZ_JHDJ01000148.1 Protein Homology CDS 46664 47608 . + 0 ID=cds-WP_000769322.1;Parent=gene-AD08_RS13370;Dbxref=Genbank:WP_000769322.1;Name=WP_000769322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310337.1;locus_tag=AD08_RS13370;product=DUF1471 domain-containing protein;protein_id=WP_000769322.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 47794 49176 . + . ID=gene-AD08_RS13365;Name=AD08_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13365;old_locus_tag=AD08_1877 NZ_JHDJ01000148.1 Protein Homology CDS 47794 49176 . + 0 ID=cds-WP_000412379.1;Parent=gene-AD08_RS13365;Dbxref=Genbank:WP_000412379.1;Name=WP_000412379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416122.1;locus_tag=AD08_RS13365;product=amino acid permease;protein_id=WP_000412379.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 49213 49935 . + . ID=gene-AD08_RS13360;Name=folM;gbkey=Gene;gene=folM;gene_biotype=protein_coding;locus_tag=AD08_RS13360;old_locus_tag=AD08_1878 NZ_JHDJ01000148.1 Protein Homology CDS 49213 49935 . + 0 ID=cds-WP_000520804.1;Parent=gene-AD08_RS13360;Dbxref=Genbank:WP_000520804.1;Name=WP_000520804.1;gbkey=CDS;gene=folM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310339.1;locus_tag=AD08_RS13360;product=dihydromonapterin reductase;protein_id=WP_000520804.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 49932 50267 . - . ID=gene-AD08_RS13355;Name=AD08_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13355;old_locus_tag=AD08_1879 NZ_JHDJ01000148.1 Protein Homology CDS 49932 50267 . - 0 ID=cds-WP_000524868.1;Parent=gene-AD08_RS13355;Dbxref=Genbank:WP_000524868.1;Name=WP_000524868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310340.1;locus_tag=AD08_RS13355;product=GlpM family protein;protein_id=WP_000524868.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 50396 51115 . + . ID=gene-AD08_RS13350;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=AD08_RS13350;old_locus_tag=AD08_1880 NZ_JHDJ01000148.1 Protein Homology CDS 50396 51115 . + 0 ID=cds-WP_001092508.1;Parent=gene-AD08_RS13350;Dbxref=Genbank:WP_001092508.1;Name=WP_001092508.1;gbkey=CDS;gene=rstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416125.2;locus_tag=AD08_RS13350;product=two-component system response regulator RstA;protein_id=WP_001092508.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 51119 52420 . + . ID=gene-AD08_RS13345;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=AD08_RS13345;old_locus_tag=AD08_1881 NZ_JHDJ01000148.1 Protein Homology CDS 51119 52420 . + 0 ID=cds-WP_001468784.1;Parent=gene-AD08_RS13345;Dbxref=Genbank:WP_001468784.1;Name=WP_001468784.1;gbkey=CDS;gene=rstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416126.1;locus_tag=AD08_RS13345;product=two-component system sensor histidine kinase RstB;protein_id=WP_001468784.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 52496 53425 . + . ID=gene-AD08_RS13340;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=AD08_RS13340;old_locus_tag=AD08_1882 NZ_JHDJ01000148.1 Protein Homology CDS 52496 53425 . + 0 ID=cds-WP_005757378.1;Parent=gene-AD08_RS13340;Dbxref=Genbank:WP_005757378.1;Name=WP_005757378.1;gbkey=CDS;gene=tus;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416127.1;locus_tag=AD08_RS13340;product=DNA replication terminus site-binding protein;protein_id=WP_005757378.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 53422 54825 . - . ID=gene-AD08_RS13335;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AD08_RS13335;old_locus_tag=AD08_1883 NZ_JHDJ01000148.1 Protein Homology CDS 53422 54825 . - 0 ID=cds-WP_001099085.1;Parent=gene-AD08_RS13335;Dbxref=Genbank:WP_001099085.1;Name=WP_001099085.1;gbkey=CDS;gene=fumC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416128.1;locus_tag=AD08_RS13335;product=class II fumarate hydratase;protein_id=WP_001099085.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 54968 56614 . - . ID=gene-AD08_RS13330;Name=AD08_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13330;old_locus_tag=AD08_1884 NZ_JHDJ01000148.1 Protein Homology CDS 54968 56614 . - 0 ID=cds-WP_000066639.1;Parent=gene-AD08_RS13330;Dbxref=Genbank:WP_000066639.1;Name=WP_000066639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=AD08_RS13330;product=class I fumarate hydratase;protein_id=WP_000066639.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 56813 57988 . + . ID=gene-AD08_RS13325;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=AD08_RS13325;old_locus_tag=AD08_1885 NZ_JHDJ01000148.1 Protein Homology CDS 56813 57988 . + 0 ID=cds-WP_032218711.1;Parent=gene-AD08_RS13325;Dbxref=Genbank:WP_032218711.1;Name=WP_032218711.1;gbkey=CDS;gene=manA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416130.3;locus_tag=AD08_RS13325;product=mannose-6-phosphate isomerase;protein_id=WP_032218711.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 58089 59597 . + . ID=gene-AD08_RS13320;Name=AD08_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13320;old_locus_tag=AD08_1886 NZ_JHDJ01000148.1 Protein Homology CDS 58089 59597 . + 0 ID=cds-WP_001043339.1;Parent=gene-AD08_RS13320;Dbxref=Genbank:WP_001043339.1;Name=WP_001043339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416131.1;locus_tag=AD08_RS13320;product=YdgA family protein;protein_id=WP_001043339.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 59823 61088 . - . ID=gene-AD08_RS13315;Name=uidC;gbkey=Gene;gene=uidC;gene_biotype=protein_coding;locus_tag=AD08_RS13315;old_locus_tag=AD08_1887 NZ_JHDJ01000148.1 Protein Homology CDS 59823 61088 . - 0 ID=cds-WP_001227023.1;Parent=gene-AD08_RS13315;Dbxref=Genbank:WP_001227023.1;Name=WP_001227023.1;gbkey=CDS;gene=uidC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416132.2;locus_tag=AD08_RS13315;product=glucuronide uptake porin UidC;protein_id=WP_001227023.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 61127 62500 . - . ID=gene-AD08_RS13310;Name=uidB;gbkey=Gene;gene=uidB;gene_biotype=protein_coding;locus_tag=AD08_RS13310;old_locus_tag=AD08_1888 NZ_JHDJ01000148.1 Protein Homology CDS 61127 62500 . - 0 ID=cds-WP_001075863.1;Parent=gene-AD08_RS13310;Dbxref=Genbank:WP_001075863.1;Name=WP_001075863.1;gbkey=CDS;gene=uidB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416133.1;locus_tag=AD08_RS13310;product=glucuronide transporter;protein_id=WP_001075863.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq pseudogene 62497 64308 . - . ID=gene-AD08_RS0125855;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=pseudogene;locus_tag=AD08_RS0125855;pseudo=true NZ_JHDJ01000148.1 Protein Homology CDS 62497 64308 . - 0 ID=cds-AD08_RS0125855;Parent=gene-AD08_RS0125855;Note=internal stop;gbkey=CDS;gene=uidA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416134.1;locus_tag=AD08_RS0125855;product=beta-glucuronidase;pseudo=true;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 64699 65289 . - . ID=gene-AD08_RS13305;Name=AD08_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13305;old_locus_tag=AD08_1891 NZ_JHDJ01000148.1 Protein Homology CDS 64699 65289 . - 0 ID=cds-WP_000969092.1;Parent=gene-AD08_RS13305;Dbxref=Genbank:WP_000969092.1;Name=WP_000969092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310353.1;locus_tag=AD08_RS13305;product=DNA-binding transcriptional regulator UidR;protein_id=WP_000969092.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 65510 66277 . - . ID=gene-AD08_RS13300;Name=hdhA;gbkey=Gene;gene=hdhA;gene_biotype=protein_coding;locus_tag=AD08_RS13300;old_locus_tag=AD08_1892 NZ_JHDJ01000148.1 Protein Homology CDS 65510 66277 . - 0 ID=cds-WP_000483353.1;Parent=gene-AD08_RS13300;Dbxref=Genbank:WP_000483353.1;Name=WP_000483353.1;gbkey=CDS;gene=hdhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310354.1;locus_tag=AD08_RS13300;product=7-alpha-hydroxysteroid dehydrogenase;protein_id=WP_000483353.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 66389 67417 . - . ID=gene-AD08_RS13295;Name=AD08_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13295;old_locus_tag=AD08_1893 NZ_JHDJ01000148.1 Protein Homology CDS 66389 67417 . - 0 ID=cds-WP_000179510.1;Parent=gene-AD08_RS13295;Dbxref=Genbank:WP_000179510.1;Name=WP_000179510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=AD08_RS13295;product=mal regulon transcriptional regulator MalI;protein_id=WP_000179510.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 67592 69184 . + . ID=gene-AD08_RS13290;Name=AD08_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13290;old_locus_tag=AD08_1894 NZ_JHDJ01000148.1 Protein Homology CDS 67592 69184 . + 0 ID=cds-WP_000125583.1;Parent=gene-AD08_RS13290;Dbxref=Genbank:WP_000125583.1;Name=WP_000125583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416138.1;locus_tag=AD08_RS13290;product=PTS maltose transporter subunit IICB;protein_id=WP_000125583.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 69194 70366 . + . ID=gene-AD08_RS13285;Name=malY;gbkey=Gene;gene=malY;gene_biotype=protein_coding;locus_tag=AD08_RS13285;old_locus_tag=AD08_1895 NZ_JHDJ01000148.1 Protein Homology CDS 69194 70366 . + 0 ID=cds-WP_000459379.1;Parent=gene-AD08_RS13285;Dbxref=Genbank:WP_000459379.1;Name=WP_000459379.1;gbkey=CDS;gene=malY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416139.1;locus_tag=AD08_RS13285;product=bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY;protein_id=WP_000459379.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 70470 71471 . + . ID=gene-AD08_RS13280;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=AD08_RS13280;old_locus_tag=AD08_1896 NZ_JHDJ01000148.1 Protein Homology CDS 70470 71471 . + 0 ID=cds-WP_001413298.1;Parent=gene-AD08_RS13280;Dbxref=Genbank:WP_001413298.1;Name=WP_001413298.1;gbkey=CDS;gene=add;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416140.1;locus_tag=AD08_RS13280;product=adenosine deaminase;protein_id=WP_001413298.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 71505 72545 . - . ID=gene-AD08_RS13275;Name=AD08_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13275;old_locus_tag=AD08_1897 NZ_JHDJ01000148.1 Protein Homology CDS 71505 72545 . - 0 ID=cds-WP_032218715.1;Parent=gene-AD08_RS13275;Dbxref=Genbank:WP_032218715.1;Name=WP_032218715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=AD08_RS13275;product=oxidoreductase;protein_id=WP_032218715.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 72788 72913 . + . ID=gene-AD08_RS0125860;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=AD08_RS0125860 NZ_JHDJ01000148.1 Protein Homology CDS 72788 72913 . + 0 ID=cds-WP_001300888.1;Parent=gene-AD08_RS0125860;Dbxref=Genbank:WP_001300888.1;Name=WP_001300888.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=AD08_RS0125860;product=division septum protein Blr;protein_id=WP_001300888.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 73186 73401 . + . ID=gene-AD08_RS13270;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=AD08_RS13270;old_locus_tag=AD08_1898 NZ_JHDJ01000148.1 Protein Homology CDS 73186 73401 . + 0 ID=cds-WP_000217950.1;Parent=gene-AD08_RS13270;Dbxref=Genbank:WP_000217950.1;Name=WP_000217950.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310361.1;locus_tag=AD08_RS13270;product=transcription modulator YdgT;protein_id=WP_000217950.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 73487 73927 . + . ID=gene-AD08_RS13265;Name=AD08_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13265;old_locus_tag=AD08_1899 NZ_JHDJ01000148.1 Protein Homology CDS 73487 73927 . + 0 ID=cds-WP_001310854.1;Parent=gene-AD08_RS13265;Dbxref=Genbank:WP_001310854.1;Name=WP_001310854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416143.2;locus_tag=AD08_RS13265;product=DUF2569 domain-containing protein;protein_id=WP_001310854.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 74004 74585 . + . ID=gene-AD08_RS13260;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=AD08_RS13260;old_locus_tag=AD08_1900 NZ_JHDJ01000148.1 Protein Homology CDS 74004 74585 . + 0 ID=cds-WP_000133193.1;Parent=gene-AD08_RS13260;Dbxref=Genbank:WP_000133193.1;Name=WP_000133193.1;gbkey=CDS;gene=rsxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=AD08_RS13260;product=electron transport complex subunit RsxA;protein_id=WP_000133193.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 74585 75163 . + . ID=gene-AD08_RS13255;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=AD08_RS13255;old_locus_tag=AD08_1901 NZ_JHDJ01000148.1 Protein Homology CDS 74585 75163 . + 0 ID=cds-WP_000991805.1;Parent=gene-AD08_RS13255;Dbxref=Genbank:WP_000991805.1;Name=WP_000991805.1;gbkey=CDS;gene=rsxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416145.1;locus_tag=AD08_RS13255;product=electron transport complex subunit RsxB;protein_id=WP_000991805.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 75156 77378 . + . ID=gene-AD08_RS13250;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=AD08_RS13250;old_locus_tag=AD08_1902 NZ_JHDJ01000148.1 Protein Homology CDS 75156 77378 . + 0 ID=cds-WP_032218719.1;Parent=gene-AD08_RS13250;Dbxref=Genbank:WP_032218719.1;Name=WP_032218719.1;gbkey=CDS;gene=rsxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416146.1;locus_tag=AD08_RS13250;product=electron transport complex subunit RsxC;protein_id=WP_032218719.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 77379 78437 . + . ID=gene-AD08_RS13245;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=AD08_RS13245;old_locus_tag=AD08_1903 NZ_JHDJ01000148.1 Protein Homology CDS 77379 78437 . + 0 ID=cds-WP_000231927.1-2;Parent=gene-AD08_RS13245;Dbxref=Genbank:WP_000231927.1;Name=WP_000231927.1;gbkey=CDS;gene=rsxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416147.1;locus_tag=AD08_RS13245;product=electron transport complex subunit RsxD;protein_id=WP_000231927.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 78441 79061 . + . ID=gene-AD08_RS13240;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=AD08_RS13240;old_locus_tag=AD08_1904 NZ_JHDJ01000148.1 Protein Homology CDS 78441 79061 . + 0 ID=cds-WP_000920784.1;Parent=gene-AD08_RS13240;Dbxref=Genbank:WP_000920784.1;Name=WP_000920784.1;gbkey=CDS;gene=rsxG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416148.1;locus_tag=AD08_RS13240;product=electron transport complex subunit RsxG;protein_id=WP_000920784.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 79065 79760 . + . ID=gene-AD08_RS13235;Name=AD08_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13235;old_locus_tag=AD08_1905 NZ_JHDJ01000148.1 Protein Homology CDS 79065 79760 . + 0 ID=cds-WP_001289652.1;Parent=gene-AD08_RS13235;Dbxref=Genbank:WP_001289652.1;Name=WP_001289652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416149.1;locus_tag=AD08_RS13235;product=electron transport complex subunit RsxE;protein_id=WP_001289652.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 79760 80395 . + . ID=gene-AD08_RS13230;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=AD08_RS13230;old_locus_tag=AD08_1906 NZ_JHDJ01000148.1 Protein Homology CDS 79760 80395 . + 0 ID=cds-WP_001373638.1;Parent=gene-AD08_RS13230;Dbxref=Genbank:WP_001373638.1;Name=WP_001373638.1;gbkey=CDS;gene=nth;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416150.1;locus_tag=AD08_RS13230;product=endonuclease III;protein_id=WP_001373638.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 81006 82508 . + . ID=gene-AD08_RS13225;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=AD08_RS13225;old_locus_tag=AD08_1907 NZ_JHDJ01000148.1 Protein Homology CDS 81006 82508 . + 0 ID=cds-WP_001511811.1;Parent=gene-AD08_RS13225;Dbxref=Genbank:WP_001511811.1;Name=WP_001511811.1;gbkey=CDS;gene=dtpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416151.1;locus_tag=AD08_RS13225;product=dipeptide/tripeptide permease DtpA;protein_id=WP_001511811.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 82614 83219 . + . ID=gene-AD08_RS13220;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=AD08_RS13220;old_locus_tag=AD08_1908 NZ_JHDJ01000148.1 Protein Homology CDS 82614 83219 . + 0 ID=cds-WP_000765749.1;Parent=gene-AD08_RS13220;Dbxref=Genbank:WP_000765749.1;Name=WP_000765749.1;gbkey=CDS;gene=gstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310371.1;locus_tag=AD08_RS13220;product=glutathione transferase GstA;protein_id=WP_000765749.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 83263 84123 . - . ID=gene-AD08_RS13215;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=AD08_RS13215;old_locus_tag=AD08_1909 NZ_JHDJ01000148.1 Protein Homology CDS 83263 84123 . - 0 ID=cds-WP_000789751.1;Parent=gene-AD08_RS13215;Dbxref=Genbank:WP_000789751.1;Name=WP_000789751.1;gbkey=CDS;gene=pdxY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310372.2;locus_tag=AD08_RS13215;product=pyridoxal kinase PdxY;protein_id=WP_000789751.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 84185 85459 . - . ID=gene-AD08_RS13210;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=AD08_RS13210;old_locus_tag=AD08_1910 NZ_JHDJ01000148.1 Protein Homology CDS 84185 85459 . - 0 ID=cds-WP_001295400.1;Parent=gene-AD08_RS13210;Dbxref=Genbank:WP_001295400.1;Name=WP_001295400.1;gbkey=CDS;gene=tyrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310373.1;locus_tag=AD08_RS13210;product=tyrosine--tRNA ligase;protein_id=WP_001295400.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 85588 86244 . - . ID=gene-AD08_RS13205;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=AD08_RS13205;old_locus_tag=AD08_1911 NZ_JHDJ01000148.1 Protein Homology CDS 85588 86244 . - 0 ID=cds-WP_001282319.1;Parent=gene-AD08_RS13205;Dbxref=Genbank:WP_001282319.1;Name=WP_001282319.1;gbkey=CDS;gene=pdxH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=AD08_RS13205;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282319.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 86303 86632 . - . ID=gene-AD08_RS13200;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=AD08_RS13200;old_locus_tag=AD08_1912 NZ_JHDJ01000148.1 Protein Homology CDS 86303 86632 . - 0 ID=cds-WP_000178044.1;Parent=gene-AD08_RS13200;Dbxref=Genbank:WP_000178044.1;Name=WP_000178044.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416156.4;locus_tag=AD08_RS13200;product=C-type lysozyme inhibitor;protein_id=WP_000178044.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 86730 87839 . - . ID=gene-AD08_RS13195;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=AD08_RS13195;old_locus_tag=AD08_1913 NZ_JHDJ01000148.1 Protein Homology CDS 86730 87839 . - 0 ID=cds-WP_000835077.1;Parent=gene-AD08_RS13195;Dbxref=Genbank:WP_000835077.1;Name=WP_000835077.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416157.1;locus_tag=AD08_RS13195;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835077.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 88113 88580 . + . ID=gene-AD08_RS13190;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=AD08_RS13190;old_locus_tag=AD08_1914 NZ_JHDJ01000148.1 Protein Homology CDS 88113 88580 . + 0 ID=cds-WP_000597196.1;Parent=gene-AD08_RS13190;Dbxref=Genbank:WP_000597196.1;Name=WP_000597196.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310377.1;locus_tag=AD08_RS13190;product=outer membrane lipoprotein SlyB;protein_id=WP_000597196.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 88627 89061 . - . ID=gene-AD08_RS13185;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=AD08_RS13185;old_locus_tag=AD08_1915 NZ_JHDJ01000148.1 Protein Homology CDS 88627 89061 . - 0 ID=cds-WP_001296943.1;Parent=gene-AD08_RS13185;Dbxref=Genbank:WP_001296943.1;Name=WP_001296943.1;gbkey=CDS;gene=slyA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416159.2;locus_tag=AD08_RS13185;product=transcriptional regulator SlyA;protein_id=WP_001296943.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 89262 89498 . + . ID=gene-AD08_RS13180;Name=AD08_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13180;old_locus_tag=AD08_1917 NZ_JHDJ01000148.1 Protein Homology CDS 89262 89498 . + 0 ID=cds-WP_000670998.1;Parent=gene-AD08_RS13180;Dbxref=Genbank:WP_000670998.1;Name=WP_000670998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310379.1;locus_tag=AD08_RS13180;product=DUF1656 domain-containing protein;protein_id=WP_000670998.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 89501 90358 . + . ID=gene-AD08_RS13175;Name=AD08_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13175;old_locus_tag=AD08_1918 NZ_JHDJ01000148.1 Protein Homology CDS 89501 90358 . + 0 ID=cds-WP_001300356.1;Parent=gene-AD08_RS13175;Dbxref=Genbank:WP_001300356.1;Name=WP_001300356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416161.4;locus_tag=AD08_RS13175;product=HlyD family secretion protein;protein_id=WP_001300356.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 90358 92370 . + . ID=gene-AD08_RS13170;Name=AD08_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13170;old_locus_tag=AD08_1919 NZ_JHDJ01000148.1 Protein Homology CDS 90358 92370 . + 0 ID=cds-WP_000994333.1;Parent=gene-AD08_RS13170;Dbxref=Genbank:WP_000994333.1;Name=WP_000994333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416162.1;locus_tag=AD08_RS13170;product=FUSC family protein;protein_id=WP_000994333.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 92371 92892 . - . ID=gene-AD08_RS13165;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AD08_RS13165;old_locus_tag=AD08_1920 NZ_JHDJ01000148.1 Protein Homology CDS 92371 92892 . - 0 ID=cds-WP_001296937.1;Parent=gene-AD08_RS13165;Dbxref=Genbank:WP_001296937.1;Name=WP_001296937.1;gbkey=CDS;gene=sodC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310382.1;locus_tag=AD08_RS13165;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WP_001296937.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 92973 93869 . - . ID=gene-AD08_RS13160;Name=AD08_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13160;old_locus_tag=AD08_1921 NZ_JHDJ01000148.1 Protein Homology CDS 92973 93869 . - 0 ID=cds-WP_000250656.1;Parent=gene-AD08_RS13160;Dbxref=Genbank:WP_000250656.1;Name=WP_000250656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025305.1;locus_tag=AD08_RS13160;product=aldo/keto reductase family oxidoreductase;protein_id=WP_000250656.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 93918 94157 . - . ID=gene-AD08_RS0125870;Name=AD08_RS0125870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125870 NZ_JHDJ01000148.1 Protein Homology CDS 93918 94157 . - 0 ID=cds-WP_000840481.1;Parent=gene-AD08_RS0125870;Dbxref=Genbank:WP_000840481.1;Name=WP_000840481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416165.2;locus_tag=AD08_RS0125870;product=DUF1289 domain-containing protein;protein_id=WP_000840481.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 94260 94859 . + . ID=gene-AD08_RS13155;Name=AD08_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13155;old_locus_tag=AD08_1923 NZ_JHDJ01000148.1 Protein Homology CDS 94260 94859 . + 0 ID=cds-WP_001032936.1;Parent=gene-AD08_RS13155;Dbxref=Genbank:WP_001032936.1;Name=WP_001032936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416166.3;locus_tag=AD08_RS13155;product=DNA-binding transcriptional regulator NemR;protein_id=WP_001032936.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 94896 95993 . + . ID=gene-AD08_RS13150;Name=nemA;gbkey=Gene;gene=nemA;gene_biotype=protein_coding;locus_tag=AD08_RS13150;old_locus_tag=AD08_1924 NZ_JHDJ01000148.1 Protein Homology CDS 94896 95993 . + 0 ID=cds-WP_032218724.1;Parent=gene-AD08_RS13150;Dbxref=Genbank:WP_032218724.1;Name=WP_032218724.1;gbkey=CDS;gene=nemA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416167.1;locus_tag=AD08_RS13150;product=N-ethylmaleimide reductase;protein_id=WP_032218724.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 96074 96481 . + . ID=gene-AD08_RS13145;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=AD08_RS13145;old_locus_tag=AD08_1925 NZ_JHDJ01000148.1 Protein Homology CDS 96074 96481 . + 0 ID=cds-WP_001237796.1;Parent=gene-AD08_RS13145;Dbxref=Genbank:WP_001237796.1;Name=WP_001237796.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=AD08_RS13145;product=lactoylglutathione lyase;protein_id=WP_001237796.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 96584 97231 . + . ID=gene-AD08_RS13140;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=AD08_RS13140;old_locus_tag=AD08_1926 NZ_JHDJ01000148.1 Protein Homology CDS 96584 97231 . + 0 ID=cds-WP_001282283.1;Parent=gene-AD08_RS13140;Dbxref=Genbank:WP_001282283.1;Name=WP_001282283.1;gbkey=CDS;gene=rnt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416169.1;locus_tag=AD08_RS13140;product=ribonuclease T;protein_id=WP_001282283.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 97324 101940 . + . ID=gene-AD08_RS13135;Name=AD08_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13135;old_locus_tag=AD08_1927 NZ_JHDJ01000148.1 Protein Homology CDS 97324 101940 . + 0 ID=cds-WP_032218726.1;Parent=gene-AD08_RS13135;Dbxref=Genbank:WP_032218726.1;Name=WP_032218726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416170.1;locus_tag=AD08_RS13135;product=ATP-dependent helicase;protein_id=WP_032218726.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 101991 102338 . - . ID=gene-AD08_RS13130;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=AD08_RS13130;old_locus_tag=AD08_1928 NZ_JHDJ01000148.1 Protein Homology CDS 101991 102338 . - 0 ID=cds-WP_000108172.1;Parent=gene-AD08_RS13130;Dbxref=Genbank:WP_000108172.1;Name=WP_000108172.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310390.1;locus_tag=AD08_RS13130;product=monothiol glutaredoxin 4;protein_id=WP_000108172.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 102672 103487 . + . ID=gene-AD08_RS13125;Name=AD08_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13125;old_locus_tag=AD08_1930 NZ_JHDJ01000148.1 Protein Homology CDS 102672 103487 . + 0 ID=cds-WP_000101193.1;Parent=gene-AD08_RS13125;Dbxref=Genbank:WP_000101193.1;Name=WP_000101193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416172.1;locus_tag=AD08_RS13125;product=peptidoglycan DD-endopeptidase MepH;protein_id=WP_000101193.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 103615 104196 . + . ID=gene-AD08_RS13120;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=AD08_RS13120;old_locus_tag=AD08_1931 NZ_JHDJ01000148.1 Protein Homology CDS 103615 104196 . + 0 ID=cds-WP_000007283.1;Parent=gene-AD08_RS13120;Dbxref=Genbank:WP_000007283.1;Name=WP_000007283.1;gbkey=CDS;gene=sodB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079002.1;locus_tag=AD08_RS13120;product=superoxide dismutase [Fe];protein_id=WP_000007283.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 104431 105600 . - . ID=gene-AD08_RS13115;Name=AD08_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13115;old_locus_tag=AD08_1932 NZ_JHDJ01000148.1 Protein Homology CDS 104431 105600 . - 0 ID=cds-WP_000701040.1;Parent=gene-AD08_RS13115;Dbxref=Genbank:WP_000701040.1;Name=WP_000701040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416174.1;locus_tag=AD08_RS13115;product=MFS transporter;protein_id=WP_000701040.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 105766 105855 . - . ID=gene-AD08_RS0125875;Name=ynhF;gbkey=Gene;gene=ynhF;gene_biotype=protein_coding;locus_tag=AD08_RS0125875 NZ_JHDJ01000148.1 Protein Homology CDS 105766 105855 . - 0 ID=cds-WP_000102278.1;Parent=gene-AD08_RS0125875;Dbxref=Genbank:WP_000102278.1;Name=WP_000102278.1;gbkey=CDS;gene=ynhF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=AD08_RS0125875;product=stress response protein YnhF;protein_id=WP_000102278.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 106154 107179 . + . ID=gene-AD08_RS13110;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=AD08_RS13110;old_locus_tag=AD08_1934 NZ_JHDJ01000148.1 Protein Homology CDS 106154 107179 . + 0 ID=cds-WP_000190982.1;Parent=gene-AD08_RS13110;Dbxref=Genbank:WP_000190982.1;Name=WP_000190982.1;gbkey=CDS;gene=purR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=AD08_RS13110;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190982.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 107176 108108 . - . ID=gene-AD08_RS13105;Name=AD08_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13105;old_locus_tag=AD08_1935 NZ_JHDJ01000148.1 Protein Homology CDS 107176 108108 . - 0 ID=cds-WP_000269501.1;Parent=gene-AD08_RS13105;Dbxref=Genbank:WP_000269501.1;Name=WP_000269501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310395.1;locus_tag=AD08_RS13105;product=LysR family transcriptional regulator;protein_id=WP_000269501.1;transl_table=11 NZ_JHDJ01000148.1 RefSeq gene 108221 109229 . + . ID=gene-AD08_RS13100;Name=AD08_RS13100;end_range=109229,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13100;old_locus_tag=AD08_1936;partial=true NZ_JHDJ01000148.1 Protein Homology CDS 108221 109229 . + 0 ID=cds-WP_032218730.1;Parent=gene-AD08_RS13100;Dbxref=Genbank:WP_032218730.1;Name=WP_032218730.1;end_range=109229,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AD08_RS13100;partial=true;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_032218730.1;transl_table=11 ##sequence-region NZ_JHDJ01000149.1 1 12458 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000149.1 RefSeq region 1 12458 . + . ID=NZ_JHDJ01000149.1:1..12458;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000149.1 RefSeq gene 1 269 . - . ID=gene-AD08_RS13095;Name=AD08_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13095;old_locus_tag=AD08_1937;partial=true;start_range=.,1 NZ_JHDJ01000149.1 Protein Homology CDS 1 269 . - 0 ID=cds-WP_001407255.1;Parent=gene-AD08_RS13095;Dbxref=Genbank:WP_001407255.1;Name=WP_001407255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS13095;partial=true;product=InsA protein;protein_id=WP_001407255.1;start_range=.,1;transl_table=11 NZ_JHDJ01000149.1 RefSeq gene 491 1255 . + . ID=gene-AD08_RS13090;Name=AD08_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13090;old_locus_tag=AD08_1938 NZ_JHDJ01000149.1 Protein Homology CDS 491 1255 . + 0 ID=cds-WP_000692135.1;Parent=gene-AD08_RS13090;Dbxref=Genbank:WP_000692135.1;Name=WP_000692135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416212.1;locus_tag=AD08_RS13090;product=electron transfer flavoprotein;protein_id=WP_000692135.1;transl_table=11 NZ_JHDJ01000149.1 RefSeq gene 1275 2213 . + . ID=gene-AD08_RS13085;Name=AD08_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13085;old_locus_tag=AD08_1939 NZ_JHDJ01000149.1 Protein Homology CDS 1275 2213 . + 0 ID=cds-WP_000080722.1;Parent=gene-AD08_RS13085;Dbxref=Genbank:WP_000080722.1;Name=WP_000080722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416213.1;locus_tag=AD08_RS13085;product=electron transfer flavoprotein subunit alpha;protein_id=WP_000080722.1;transl_table=11 NZ_JHDJ01000149.1 RefSeq gene 2269 3558 . + . ID=gene-AD08_RS13080;Name=AD08_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13080;old_locus_tag=AD08_1940 NZ_JHDJ01000149.1 Protein Homology CDS 2269 3558 . + 0 ID=cds-WP_032218739.1;Parent=gene-AD08_RS13080;Dbxref=Genbank:WP_032218739.1;Name=WP_032218739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416214.1;locus_tag=AD08_RS13080;product=FAD-dependent oxidoreductase;protein_id=WP_032218739.1;transl_table=11 NZ_JHDJ01000149.1 RefSeq gene 3555 3848 . + . ID=gene-AD08_RS13075;Name=AD08_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13075;old_locus_tag=AD08_1941 NZ_JHDJ01000149.1 Protein Homology CDS 3555 3848 . + 0 ID=cds-WP_000081081.1;Parent=gene-AD08_RS13075;Dbxref=Genbank:WP_000081081.1;Name=WP_000081081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416215.1;locus_tag=AD08_RS13075;product=ferredoxin family protein;protein_id=WP_000081081.1;transl_table=11 NZ_JHDJ01000149.1 RefSeq gene 3851 5551 . + . ID=gene-AD08_RS13070;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=AD08_RS13070;old_locus_tag=AD08_1942 NZ_JHDJ01000149.1 Protein Homology CDS 3851 5551 . + 0 ID=cds-WP_000553704.1;Parent=gene-AD08_RS13070;Dbxref=Genbank:WP_000553704.1;Name=WP_000553704.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416216.5;locus_tag=AD08_RS13070;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_000553704.1;transl_table=11 NZ_JHDJ01000149.1 RefSeq gene 5608 7986 . - . ID=gene-AD08_RS13065;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=AD08_RS13065;old_locus_tag=AD08_1943 NZ_JHDJ01000149.1 Protein Homology CDS 5608 7986 . - 0 ID=cds-WP_000069375.1;Parent=gene-AD08_RS13065;Dbxref=Genbank:WP_000069375.1;Name=WP_000069375.1;gbkey=CDS;gene=ppsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000069371.1;locus_tag=AD08_RS13065;product=phosphoenolpyruvate synthase;protein_id=WP_000069375.1;transl_table=11 NZ_JHDJ01000149.1 RefSeq gene 8319 9152 . + . ID=gene-AD08_RS13055;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=AD08_RS13055;old_locus_tag=AD08_1945 NZ_JHDJ01000149.1 Protein Homology CDS 8319 9152 . + 0 ID=cds-WP_000368046.1;Parent=gene-AD08_RS13055;Dbxref=Genbank:WP_000368046.1;Name=WP_000368046.1;gbkey=CDS;gene=ppsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310437.1;locus_tag=AD08_RS13055;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000368046.1;transl_table=11 NZ_JHDJ01000149.1 RefSeq gene 9309 10355 . + . ID=gene-AD08_RS13050;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=AD08_RS13050;old_locus_tag=AD08_1946 NZ_JHDJ01000149.1 Protein Homology CDS 9309 10355 . + 0 ID=cds-WP_001082229.1;Parent=gene-AD08_RS13050;Dbxref=Genbank:WP_001082229.1;Name=WP_001082229.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416219.1;locus_tag=AD08_RS13050;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082229.1;transl_table=11 NZ_JHDJ01000149.1 RefSeq gene 10487 10678 . + . ID=gene-AD08_RS13045;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=AD08_RS13045;old_locus_tag=AD08_1947 NZ_JHDJ01000149.1 Protein Homology CDS 10487 10678 . + 0 ID=cds-WP_001270809.1;Parent=gene-AD08_RS13045;Dbxref=Genbank:WP_001270809.1;Name=WP_001270809.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310439.1;locus_tag=AD08_RS13045;product=hemin uptake protein HemP;protein_id=WP_001270809.1;transl_table=11 NZ_JHDJ01000149.1 RefSeq pseudogene 10682 11989 . - . ID=gene-AD08_RS13040;Name=AD08_RS13040;end_range=11989,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS13040;old_locus_tag=AD08_1948;partial=true;pseudo=true NZ_JHDJ01000149.1 Protein Homology CDS 10682 11989 . - 0 ID=cds-AD08_RS13040;Parent=gene-AD08_RS13040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=11989,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416221.1;locus_tag=AD08_RS13040;partial=true;product=YdiU family protein;pseudo=true;transl_table=11 NZ_JHDJ01000149.1 RefSeq pseudogene 12004 12458 . - . ID=gene-AD08_RS13035;Name=AD08_RS13035;end_range=12458,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS13035;old_locus_tag=AD08_1949;partial=true;pseudo=true NZ_JHDJ01000149.1 Protein Homology CDS 12004 12458 . - 2 ID=cds-AD08_RS13035;Parent=gene-AD08_RS13035;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=12458,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS13035;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000150.1 1 90535 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000150.1 RefSeq region 1 90535 . + . ID=NZ_JHDJ01000150.1:1..90535;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000150.1 RefSeq pseudogene 1 484 . - . ID=gene-AD08_RS30480;Name=AD08_RS30480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30480;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000150.1 Protein Homology CDS 1 484 . - 0 ID=cds-AD08_RS30480;Parent=gene-AD08_RS30480;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS30480;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 535 678 . - . ID=gene-AD08_RS31705;Name=AD08_RS31705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31705;old_locus_tag=AD08_1952 NZ_JHDJ01000150.1 GeneMarkS-2+ CDS 535 678 . - 0 ID=cds-WP_162752702.1;Parent=gene-AD08_RS31705;Dbxref=Genbank:WP_162752702.1;Name=WP_162752702.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS31705;product=hypothetical protein;protein_id=WP_162752702.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 741 1454 . - . ID=gene-AD08_RS13030;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=AD08_RS13030;old_locus_tag=AD08_1953 NZ_JHDJ01000150.1 Protein Homology CDS 741 1454 . - 0 ID=cds-WP_001300634.1;Parent=gene-AD08_RS13030;Dbxref=Genbank:WP_001300634.1;Name=WP_001300634.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416222.1;locus_tag=AD08_RS13030;product=anti-FlhDC factor;protein_id=WP_001300634.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 1701 2165 . - . ID=gene-AD08_RS13025;Name=AD08_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS13025;old_locus_tag=AD08_1954 NZ_JHDJ01000150.1 Protein Homology CDS 1701 2165 . - 0 ID=cds-WP_001209795.1;Parent=gene-AD08_RS13025;Dbxref=Genbank:WP_001209795.1;Name=WP_001209795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416223.1;locus_tag=AD08_RS13025;product=endopeptidase;protein_id=WP_001209795.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 2243 2992 . - . ID=gene-AD08_RS13020;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=AD08_RS13020;old_locus_tag=AD08_1955 NZ_JHDJ01000150.1 Protein Homology CDS 2243 2992 . - 0 ID=cds-WP_000029466.1;Parent=gene-AD08_RS13020;Dbxref=Genbank:WP_000029466.1;Name=WP_000029466.1;gbkey=CDS;gene=btuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707405.1;locus_tag=AD08_RS13020;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000029466.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 2992 3543 . - . ID=gene-AD08_RS13015;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=AD08_RS13015;old_locus_tag=AD08_1956 NZ_JHDJ01000150.1 Protein Homology CDS 2992 3543 . - 0 ID=cds-WP_001154168.1;Parent=gene-AD08_RS13015;Dbxref=Genbank:WP_001154168.1;Name=WP_001154168.1;gbkey=CDS;gene=btuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416225.1;locus_tag=AD08_RS13015;product=bifunctional thioredoxin/glutathione peroxidase;protein_id=WP_001154168.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 3606 4586 . - . ID=gene-AD08_RS13010;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=AD08_RS13010;old_locus_tag=AD08_1957 NZ_JHDJ01000150.1 Protein Homology CDS 3606 4586 . - 0 ID=cds-WP_000956528.1;Parent=gene-AD08_RS13010;Dbxref=Genbank:WP_000956528.1;Name=WP_000956528.1;gbkey=CDS;gene=btuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416226.1;locus_tag=AD08_RS13010;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000956528.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 4687 4986 . - . ID=gene-AD08_RS13005;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=AD08_RS13005;old_locus_tag=AD08_1958 NZ_JHDJ01000150.1 Protein Homology CDS 4687 4986 . - 0 ID=cds-WP_001229265.1;Parent=gene-AD08_RS13005;Dbxref=Genbank:WP_001229265.1;Name=WP_001229265.1;gbkey=CDS;gene=ihfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310446.1;locus_tag=AD08_RS13005;product=integration host factor subunit alpha;protein_id=WP_001229265.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 4991 7378 . - . ID=gene-AD08_RS13000;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AD08_RS13000;old_locus_tag=AD08_1959 NZ_JHDJ01000150.1 Protein Homology CDS 4991 7378 . - 0 ID=cds-WP_000672380.1;Parent=gene-AD08_RS13000;Dbxref=Genbank:WP_000672380.1;Name=WP_000672380.1;gbkey=CDS;gene=pheT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012905611.1;locus_tag=AD08_RS13000;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000672380.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 7393 8376 . - . ID=gene-AD08_RS12995;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=AD08_RS12995;old_locus_tag=AD08_1960 NZ_JHDJ01000150.1 Protein Homology CDS 7393 8376 . - 0 ID=cds-WP_000018596.1;Parent=gene-AD08_RS12995;Dbxref=Genbank:WP_000018596.1;Name=WP_000018596.1;gbkey=CDS;gene=pheS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=AD08_RS12995;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018596.1;transl_table=11 NZ_JHDJ01000150.1 cmsearch sequence_feature 8586 8710 . - . ID=id-NZ_JHDJ01000150.1:8586..8710;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_JHDJ01000150.1 RefSeq gene 8660 8704 . - . ID=gene-AD08_RS31155;Name=AD08_RS31155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31155 NZ_JHDJ01000150.1 Protein Homology CDS 8660 8704 . - 0 ID=cds-WP_001386830.1;Parent=gene-AD08_RS31155;Dbxref=Genbank:WP_001386830.1;Name=WP_001386830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=AD08_RS31155;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 8827 9183 . - . ID=gene-AD08_RS12990;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AD08_RS12990;old_locus_tag=AD08_1962 NZ_JHDJ01000150.1 Protein Homology CDS 8827 9183 . - 0 ID=cds-WP_000124850.1;Parent=gene-AD08_RS12990;Dbxref=Genbank:WP_000124850.1;Name=WP_000124850.1;gbkey=CDS;gene=rplT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169860.1;locus_tag=AD08_RS12990;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 9236 9433 . - . ID=gene-AD08_RS12985;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=AD08_RS12985;old_locus_tag=AD08_1963 NZ_JHDJ01000150.1 Protein Homology CDS 9236 9433 . - 0 ID=cds-WP_001124225.1;Parent=gene-AD08_RS12985;Dbxref=Genbank:WP_001124225.1;Name=WP_001124225.1;gbkey=CDS;gene=rpmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=AD08_RS12985;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 9530 10072 . - . ID=gene-AD08_RS0125895;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=AD08_RS0125895 NZ_JHDJ01000150.1 Protein Homology CDS 9530 10072 . - 0 ID=cds-WP_001700733.1;Parent=gene-AD08_RS0125895;Dbxref=Genbank:WP_001700733.1;Name=WP_001700733.1;gbkey=CDS;gene=infC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=AD08_RS0125895;product=translation initiation factor IF-3;protein_id=WP_001700733.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 10076 12004 . - . ID=gene-AD08_RS12980;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AD08_RS12980;old_locus_tag=AD08_1965 NZ_JHDJ01000150.1 Protein Homology CDS 10076 12004 . - 0 ID=cds-WP_001144202.1;Parent=gene-AD08_RS12980;Dbxref=Genbank:WP_001144202.1;Name=WP_001144202.1;gbkey=CDS;gene=thrS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010245687.1;locus_tag=AD08_RS12980;product=threonine--tRNA ligase;protein_id=WP_001144202.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq pseudogene 12528 14427 . + . ID=gene-AD08_RS0125900;Name=AD08_RS0125900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125900;pseudo=true NZ_JHDJ01000150.1 Protein Homology CDS 12528 14427 . + 0 ID=cds-AD08_RS0125900;Parent=gene-AD08_RS0125900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310454.1;locus_tag=AD08_RS0125900;product=ShET2/EspL2 family type III secretion system effector toxin;pseudo=true;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 14599 14706 . + . ID=gene-AD08_RS12975;Name=AD08_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12975;old_locus_tag=AD08_1968 NZ_JHDJ01000150.1 Protein Homology CDS 14599 14706 . + 0 ID=cds-WP_001142445.1;Parent=gene-AD08_RS12975;Dbxref=Genbank:WP_001142445.1;Name=WP_001142445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588455.2;locus_tag=AD08_RS12975;product=hypothetical protein;protein_id=WP_001142445.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 14759 15517 . - . ID=gene-AD08_RS12970;Name=AD08_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12970;old_locus_tag=AD08_1969 NZ_JHDJ01000150.1 Protein Homology CDS 14759 15517 . - 0 ID=cds-WP_000771391.1;Parent=gene-AD08_RS12970;Dbxref=Genbank:WP_000771391.1;Name=WP_000771391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416236.1;locus_tag=AD08_RS12970;product=YdiY family protein;protein_id=WP_000771391.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 15804 16733 . + . ID=gene-AD08_RS12965;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=AD08_RS12965;old_locus_tag=AD08_1970 NZ_JHDJ01000150.1 Protein Homology CDS 15804 16733 . + 0 ID=cds-WP_000251727.1;Parent=gene-AD08_RS12965;Dbxref=Genbank:WP_000251727.1;Name=WP_000251727.1;gbkey=CDS;gene=pfkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416237.3;locus_tag=AD08_RS12965;product=6-phosphofructokinase II;protein_id=WP_000251727.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 16834 17124 . + . ID=gene-AD08_RS12960;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=AD08_RS12960;old_locus_tag=AD08_1971 NZ_JHDJ01000150.1 Protein Homology CDS 16834 17124 . + 0 ID=cds-WP_000146159.1;Parent=gene-AD08_RS12960;Dbxref=Genbank:WP_000146159.1;Name=WP_000146159.1;gbkey=CDS;gene=ghoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310457.1;locus_tag=AD08_RS12960;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146159.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 17230 18090 . + . ID=gene-AD08_RS12955;Name=AD08_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12955;old_locus_tag=AD08_1972 NZ_JHDJ01000150.1 Protein Homology CDS 17230 18090 . + 0 ID=cds-WP_000267650.1;Parent=gene-AD08_RS12955;Dbxref=Genbank:WP_000267650.1;Name=WP_000267650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416239.1;locus_tag=AD08_RS12955;product=fructosamine kinase family protein;protein_id=WP_000267650.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 18131 18667 . - . ID=gene-AD08_RS12950;Name=AD08_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12950;old_locus_tag=AD08_1973 NZ_JHDJ01000150.1 Protein Homology CDS 18131 18667 . - 0 ID=cds-WP_000222163.1;Parent=gene-AD08_RS12950;Dbxref=Genbank:WP_000222163.1;Name=WP_000222163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416240.1;locus_tag=AD08_RS12950;product=hypothetical protein;protein_id=WP_000222163.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 18814 19482 . + . ID=gene-AD08_RS12945;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=AD08_RS12945;old_locus_tag=AD08_1974 NZ_JHDJ01000150.1 Protein Homology CDS 18814 19482 . + 0 ID=cds-WP_000106833.1;Parent=gene-AD08_RS12945;Dbxref=Genbank:WP_000106833.1;Name=WP_000106833.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416241.1;locus_tag=AD08_RS12945;product=hexitol phosphatase HxpB;protein_id=WP_000106833.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 19645 20235 . + . ID=gene-AD08_RS12940;Name=AD08_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12940;old_locus_tag=AD08_1975 NZ_JHDJ01000150.1 Protein Homology CDS 19645 20235 . + 0 ID=cds-WP_001297653.1;Parent=gene-AD08_RS12940;Dbxref=Genbank:WP_001297653.1;Name=WP_001297653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707386.2;locus_tag=AD08_RS12940;product=metal-dependent hydrolase;protein_id=WP_001297653.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 20368 21759 . + . ID=gene-AD08_RS12935;Name=AD08_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12935;old_locus_tag=AD08_1976 NZ_JHDJ01000150.1 Protein Homology CDS 20368 21759 . + 0 ID=cds-WP_001010696.1;Parent=gene-AD08_RS12935;Dbxref=Genbank:WP_001010696.1;Name=WP_001010696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416243.1;locus_tag=AD08_RS12935;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010696.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 21763 22566 . - . ID=gene-AD08_RS12930;Name=AD08_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12930;old_locus_tag=AD08_1977 NZ_JHDJ01000150.1 Protein Homology CDS 21763 22566 . - 0 ID=cds-WP_032218753.1;Parent=gene-AD08_RS12930;Dbxref=Genbank:WP_032218753.1;Name=WP_032218753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416244.2;locus_tag=AD08_RS12930;product=hypothetical protein;protein_id=WP_032218753.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 22855 23118 . - . ID=gene-AD08_RS12925;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=AD08_RS12925;old_locus_tag=AD08_1978 NZ_JHDJ01000150.1 Protein Homology CDS 22855 23118 . - 0 ID=cds-WP_001241561.1;Parent=gene-AD08_RS12925;Dbxref=Genbank:WP_001241561.1;Name=WP_001241561.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310464.1;locus_tag=AD08_RS12925;product=cell division activator CedA;protein_id=WP_001241561.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 23301 25562 . + . ID=gene-AD08_RS12920;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=AD08_RS12920;old_locus_tag=AD08_1979 NZ_JHDJ01000150.1 Protein Homology CDS 23301 25562 . + 0 ID=cds-WP_000077873.1;Parent=gene-AD08_RS12920;Dbxref=Genbank:WP_000077873.1;Name=WP_000077873.1;gbkey=CDS;gene=katE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025308.1;locus_tag=AD08_RS12920;product=catalase HPII;protein_id=WP_000077873.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 25820 26569 . - . ID=gene-AD08_RS12915;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=AD08_RS12915;old_locus_tag=AD08_1980 NZ_JHDJ01000150.1 Protein Homology CDS 25820 26569 . - 0 ID=cds-WP_000440471.1;Parent=gene-AD08_RS12915;Dbxref=Genbank:WP_000440471.1;Name=WP_000440471.1;gbkey=CDS;gene=chbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416247.1;locus_tag=AD08_RS12915;product=chitin disaccharide deacetylase;protein_id=WP_000440471.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 26582 27934 . - . ID=gene-AD08_RS12910;Name=AD08_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12910;old_locus_tag=AD08_1981 NZ_JHDJ01000150.1 Protein Homology CDS 26582 27934 . - 0 ID=cds-WP_000078757.1;Parent=gene-AD08_RS12910;Dbxref=Genbank:WP_000078757.1;Name=WP_000078757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416248.1;locus_tag=AD08_RS12910;product=6-phospho-beta-glucosidase;protein_id=WP_000078757.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 28039 28878 . - . ID=gene-AD08_RS12905;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=AD08_RS12905;old_locus_tag=AD08_1982 NZ_JHDJ01000150.1 Protein Homology CDS 28039 28878 . - 0 ID=cds-WP_001301288.1;Parent=gene-AD08_RS12905;Dbxref=Genbank:WP_001301288.1;Name=WP_001301288.1;gbkey=CDS;gene=chbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310468.2;locus_tag=AD08_RS12905;product=transcriptional regulator ChbR;protein_id=WP_001301288.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 28889 29239 . - . ID=gene-AD08_RS12900;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=AD08_RS12900;old_locus_tag=AD08_1983 NZ_JHDJ01000150.1 Protein Homology CDS 28889 29239 . - 0 ID=cds-WP_000968919.1;Parent=gene-AD08_RS12900;Dbxref=Genbank:WP_000968919.1;Name=WP_000968919.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310469.1;locus_tag=AD08_RS12900;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000968919.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 29290 30648 . - . ID=gene-AD08_RS12895;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=AD08_RS12895;old_locus_tag=AD08_1984 NZ_JHDJ01000150.1 Protein Homology CDS 29290 30648 . - 0 ID=cds-WP_032218755.1;Parent=gene-AD08_RS12895;Dbxref=Genbank:WP_032218755.1;Name=WP_032218755.1;gbkey=CDS;gene=chbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416251.1;locus_tag=AD08_RS12895;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_032218755.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 30733 31053 . - . ID=gene-AD08_RS12890;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=AD08_RS12890;old_locus_tag=AD08_1985 NZ_JHDJ01000150.1 Protein Homology CDS 30733 31053 . - 0 ID=cds-WP_000412169.1;Parent=gene-AD08_RS12890;Dbxref=Genbank:WP_000412169.1;Name=WP_000412169.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310471.1;locus_tag=AD08_RS12890;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412169.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 31352 31690 . - . ID=gene-AD08_RS12885;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=AD08_RS12885;old_locus_tag=AD08_1986 NZ_JHDJ01000150.1 Protein Homology CDS 31352 31690 . - 0 ID=cds-WP_001387968.1;Parent=gene-AD08_RS12885;Dbxref=Genbank:WP_001387968.1;Name=WP_001387968.1;gbkey=CDS;gene=osmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310472.1;locus_tag=AD08_RS12885;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001387968.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 31892 32719 . + . ID=gene-AD08_RS12880;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=AD08_RS12880;old_locus_tag=AD08_1987 NZ_JHDJ01000150.1 Protein Homology CDS 31892 32719 . + 0 ID=cds-WP_000175026.1;Parent=gene-AD08_RS12880;Dbxref=Genbank:WP_000175026.1;Name=WP_000175026.1;gbkey=CDS;gene=nadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416254.1;locus_tag=AD08_RS12880;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000175026.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 32949 33836 . + . ID=gene-AD08_RS12875;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=AD08_RS12875;old_locus_tag=AD08_1988 NZ_JHDJ01000150.1 Protein Homology CDS 32949 33836 . + 0 ID=cds-WP_000252397.1;Parent=gene-AD08_RS12875;Dbxref=Genbank:WP_000252397.1;Name=WP_000252397.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416255.1;locus_tag=AD08_RS12875;product=excinuclease Cho;protein_id=WP_000252397.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 33796 34371 . - . ID=gene-AD08_RS12870;Name=ves;gbkey=Gene;gene=ves;gene_biotype=protein_coding;locus_tag=AD08_RS12870;old_locus_tag=AD08_1989 NZ_JHDJ01000150.1 Protein Homology CDS 33796 34371 . - 0 ID=cds-WP_001300480.1;Parent=gene-AD08_RS12870;Dbxref=Genbank:WP_001300480.1;Name=WP_001300480.1;gbkey=CDS;gene=ves;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416256.2;locus_tag=AD08_RS12870;product=environmental stress-induced protein Ves;protein_id=WP_001300480.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 34574 35059 . - . ID=gene-AD08_RS12865;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=AD08_RS12865;old_locus_tag=AD08_1990 NZ_JHDJ01000150.1 Protein Homology CDS 34574 35059 . - 0 ID=cds-WP_001228984.1;Parent=gene-AD08_RS12865;Dbxref=Genbank:WP_001228984.1;Name=WP_001228984.1;gbkey=CDS;gene=spy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416257.1;locus_tag=AD08_RS12865;product=ATP-independent periplasmic protein-refolding chaperone;protein_id=WP_001228984.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 35389 36357 . - . ID=gene-AD08_RS12860;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=AD08_RS12860;old_locus_tag=AD08_1991 NZ_JHDJ01000150.1 Protein Homology CDS 35389 36357 . - 0 ID=cds-WP_000368506.1;Parent=gene-AD08_RS12860;Dbxref=Genbank:WP_000368506.1;Name=WP_000368506.1;gbkey=CDS;gene=astE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416258.1;locus_tag=AD08_RS12860;product=succinylglutamate desuccinylase;protein_id=WP_000368506.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 36350 37693 . - . ID=gene-AD08_RS12855;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=AD08_RS12855;old_locus_tag=AD08_1992 NZ_JHDJ01000150.1 Protein Homology CDS 36350 37693 . - 0 ID=cds-WP_032190659.1;Parent=gene-AD08_RS12855;Dbxref=Genbank:WP_032190659.1;Name=WP_032190659.1;gbkey=CDS;gene=astB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416259.1;locus_tag=AD08_RS12855;product=N-succinylarginine dihydrolase;protein_id=WP_032190659.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 37690 39168 . - . ID=gene-AD08_RS12850;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=AD08_RS12850;old_locus_tag=AD08_1993 NZ_JHDJ01000150.1 Protein Homology CDS 37690 39168 . - 0 ID=cds-WP_000177206.1;Parent=gene-AD08_RS12850;Dbxref=Genbank:WP_000177206.1;Name=WP_000177206.1;gbkey=CDS;gene=astD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416260.1;locus_tag=AD08_RS12850;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_000177206.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 39165 40199 . - . ID=gene-AD08_RS12845;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=AD08_RS12845;old_locus_tag=AD08_1994 NZ_JHDJ01000150.1 Protein Homology CDS 39165 40199 . - 0 ID=cds-WP_001511820.1;Parent=gene-AD08_RS12845;Dbxref=Genbank:WP_001511820.1;Name=WP_001511820.1;gbkey=CDS;gene=astA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310480.1;locus_tag=AD08_RS12845;product=arginine N-succinyltransferase;protein_id=WP_001511820.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 40196 41416 . - . ID=gene-AD08_RS12840;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=AD08_RS12840;old_locus_tag=AD08_1995 NZ_JHDJ01000150.1 Protein Homology CDS 40196 41416 . - 0 ID=cds-WP_000081983.1;Parent=gene-AD08_RS12840;Dbxref=Genbank:WP_000081983.1;Name=WP_000081983.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416262.1;locus_tag=AD08_RS12840;product=succinylornithine/acetylornithine transaminase;protein_id=WP_000081983.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 41862 42668 . + . ID=gene-AD08_RS12835;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=AD08_RS12835;old_locus_tag=AD08_1997 NZ_JHDJ01000150.1 Protein Homology CDS 41862 42668 . + 0 ID=cds-WP_000673918.1;Parent=gene-AD08_RS12835;Dbxref=Genbank:WP_000673918.1;Name=WP_000673918.1;gbkey=CDS;gene=xthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416263.1;locus_tag=AD08_RS12835;product=exodeoxyribonuclease III;protein_id=WP_000673918.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 42835 43545 . + . ID=gene-AD08_RS12830;Name=AD08_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12830;old_locus_tag=AD08_1998 NZ_JHDJ01000150.1 Protein Homology CDS 42835 43545 . + 0 ID=cds-WP_001300395.1;Parent=gene-AD08_RS12830;Dbxref=Genbank:WP_001300395.1;Name=WP_001300395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416264.4;locus_tag=AD08_RS12830;product=TVP38/TMEM64 family protein;protein_id=WP_001300395.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 43550 44227 . + . ID=gene-AD08_RS12825;Name=ydjY;gbkey=Gene;gene=ydjY;gene_biotype=protein_coding;locus_tag=AD08_RS12825;old_locus_tag=AD08_1999 NZ_JHDJ01000150.1 Protein Homology CDS 43550 44227 . + 0 ID=cds-WP_000939212.1;Parent=gene-AD08_RS12825;Dbxref=Genbank:WP_000939212.1;Name=WP_000939212.1;gbkey=CDS;gene=ydjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416265.4;locus_tag=AD08_RS12825;product=protein YdjY;protein_id=WP_000939212.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 44242 44928 . + . ID=gene-AD08_RS12820;Name=AD08_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12820;old_locus_tag=AD08_2000 NZ_JHDJ01000150.1 Protein Homology CDS 44242 44928 . + 0 ID=cds-WP_024209136.1;Parent=gene-AD08_RS12820;Dbxref=Genbank:WP_024209136.1;Name=WP_024209136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416266.1;locus_tag=AD08_RS12820;product=TVP38/TMEM64 family protein;protein_id=WP_024209136.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 44949 45497 . + . ID=gene-AD08_RS12815;Name=AD08_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12815;old_locus_tag=AD08_2001 NZ_JHDJ01000150.1 Protein Homology CDS 44949 45497 . + 0 ID=cds-WP_000524097.1;Parent=gene-AD08_RS12815;Dbxref=Genbank:WP_000524097.1;Name=WP_000524097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416267.1;locus_tag=AD08_RS12815;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000524097.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 45507 46673 . + . ID=gene-AD08_RS12810;Name=AD08_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12810;old_locus_tag=AD08_2002 NZ_JHDJ01000150.1 Protein Homology CDS 45507 46673 . + 0 ID=cds-WP_001215339.1;Parent=gene-AD08_RS12810;Dbxref=Genbank:WP_001215339.1;Name=WP_001215339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416268.2;locus_tag=AD08_RS12810;product=ABC transporter substrate-binding protein;protein_id=WP_001215339.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 46646 48181 . + . ID=gene-AD08_RS12805;Name=AD08_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12805;old_locus_tag=AD08_2003 NZ_JHDJ01000150.1 Protein Homology CDS 46646 48181 . + 0 ID=cds-WP_000224958.1;Parent=gene-AD08_RS12805;Dbxref=Genbank:WP_000224958.1;Name=WP_000224958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416269.4;locus_tag=AD08_RS12805;product=ABC transporter permease subunit;protein_id=WP_000224958.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 48181 48834 . + . ID=gene-AD08_RS12800;Name=AD08_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12800;old_locus_tag=AD08_2004 NZ_JHDJ01000150.1 Protein Homology CDS 48181 48834 . + 0 ID=cds-WP_001300558.1;Parent=gene-AD08_RS12800;Dbxref=Genbank:WP_001300558.1;Name=WP_001300558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416270.1;locus_tag=AD08_RS12800;product=ATP-binding cassette domain-containing protein;protein_id=WP_001300558.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 48901 50208 . + . ID=gene-AD08_RS12795;Name=AD08_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12795;old_locus_tag=AD08_2005 NZ_JHDJ01000150.1 Protein Homology CDS 48901 50208 . + 0 ID=cds-WP_001301291.1;Parent=gene-AD08_RS12795;Dbxref=Genbank:WP_001301291.1;Name=WP_001301291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416271.4;locus_tag=AD08_RS12795;product=thiosulfate sulfurtransferase YnjE;protein_id=WP_001301291.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 50217 50837 . - . ID=gene-AD08_RS12790;Name=AD08_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12790;old_locus_tag=AD08_2006 NZ_JHDJ01000150.1 Protein Homology CDS 50217 50837 . - 0 ID=cds-WP_001295484.1;Parent=gene-AD08_RS12790;Dbxref=Genbank:WP_001295484.1;Name=WP_001295484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416272.2;locus_tag=AD08_RS12790;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_001295484.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 50924 51331 . + . ID=gene-AD08_RS12785;Name=nudG;gbkey=Gene;gene=nudG;gene_biotype=protein_coding;locus_tag=AD08_RS12785;old_locus_tag=AD08_2007 NZ_JHDJ01000150.1 Protein Homology CDS 50924 51331 . + 0 ID=cds-WP_000781888.1;Parent=gene-AD08_RS12785;Dbxref=Genbank:WP_000781888.1;Name=WP_000781888.1;gbkey=CDS;gene=nudG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416273.1;locus_tag=AD08_RS12785;product=CTP pyrophosphohydrolase;protein_id=WP_000781888.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 51297 51569 . - . ID=gene-AD08_RS12780;Name=AD08_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12780;old_locus_tag=AD08_2008 NZ_JHDJ01000150.1 Protein Homology CDS 51297 51569 . - 0 ID=cds-WP_000085240.1;Parent=gene-AD08_RS12780;Dbxref=Genbank:WP_000085240.1;Name=WP_000085240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416274.1;locus_tag=AD08_RS12780;product=YnjH family protein;protein_id=WP_000085240.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 51805 53148 . + . ID=gene-AD08_RS12775;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=AD08_RS12775;old_locus_tag=AD08_2009 NZ_JHDJ01000150.1 Protein Homology CDS 51805 53148 . + 0 ID=cds-WP_000373021.1;Parent=gene-AD08_RS12775;Dbxref=Genbank:WP_000373021.1;Name=WP_000373021.1;gbkey=CDS;gene=gdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013366584.1;locus_tag=AD08_RS12775;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000373021.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 53265 54305 . - . ID=gene-AD08_RS12770;Name=AD08_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12770;old_locus_tag=AD08_2010 NZ_JHDJ01000150.1 Protein Homology CDS 53265 54305 . - 0 ID=cds-WP_000756910.1;Parent=gene-AD08_RS12770;Dbxref=Genbank:WP_000756910.1;Name=WP_000756910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416276.4;locus_tag=AD08_RS12770;product=DUF1266 domain-containing protein;protein_id=WP_000756910.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 54433 56394 . - . ID=gene-AD08_RS12765;Name=AD08_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12765;old_locus_tag=AD08_2011 NZ_JHDJ01000150.1 Protein Homology CDS 54433 56394 . - 0 ID=cds-WP_001235800.1;Parent=gene-AD08_RS12765;Dbxref=Genbank:WP_001235800.1;Name=WP_001235800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416277.1;locus_tag=AD08_RS12765;product=DNA topoisomerase III;protein_id=WP_001235800.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 56399 57442 . - . ID=gene-AD08_RS12760;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=AD08_RS12760;old_locus_tag=AD08_2012 NZ_JHDJ01000150.1 Protein Homology CDS 56399 57442 . - 0 ID=cds-WP_001295485.1;Parent=gene-AD08_RS12760;Dbxref=Genbank:WP_001295485.1;Name=WP_001295485.1;gbkey=CDS;gene=selD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416278.1;locus_tag=AD08_RS12760;product=selenide%2Cwater dikinase SelD;protein_id=WP_001295485.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 57559 58110 . - . ID=gene-AD08_RS12755;Name=AD08_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12755;old_locus_tag=AD08_2013 NZ_JHDJ01000150.1 Protein Homology CDS 57559 58110 . - 0 ID=cds-WP_000339283.1;Parent=gene-AD08_RS12755;Dbxref=Genbank:WP_000339283.1;Name=WP_000339283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310498.1;locus_tag=AD08_RS12755;product=NAD(P)H nitroreductase;protein_id=WP_000339283.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 58271 60127 . + . ID=gene-AD08_RS12750;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=AD08_RS12750;old_locus_tag=AD08_2014 NZ_JHDJ01000150.1 Protein Homology CDS 58271 60127 . + 0 ID=cds-WP_001259810.1;Parent=gene-AD08_RS12750;Dbxref=Genbank:WP_001259810.1;Name=WP_001259810.1;gbkey=CDS;gene=sppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416280.1;locus_tag=AD08_RS12750;product=signal peptide peptidase SppA;protein_id=WP_001259810.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 60294 61310 . + . ID=gene-AD08_RS12745;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=AD08_RS12745;old_locus_tag=AD08_2015 NZ_JHDJ01000150.1 Protein Homology CDS 60294 61310 . + 0 ID=cds-WP_032218763.1;Parent=gene-AD08_RS12745;Dbxref=Genbank:WP_032218763.1;Name=WP_032218763.1;gbkey=CDS;gene=ansA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310501.1;locus_tag=AD08_RS12745;product=asparaginase;protein_id=WP_032218763.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 61321 61962 . + . ID=gene-AD08_RS12740;Name=AD08_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12740;old_locus_tag=AD08_2016 NZ_JHDJ01000150.1 Protein Homology CDS 61321 61962 . + 0 ID=cds-WP_001135066.1;Parent=gene-AD08_RS12740;Dbxref=Genbank:WP_001135066.1;Name=WP_001135066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416282.4;locus_tag=AD08_RS12740;product=bifunctional pyrazinamidase/nicotinamidase;protein_id=WP_001135066.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 62055 63413 . - . ID=gene-AD08_RS12735;Name=AD08_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12735;old_locus_tag=AD08_2017 NZ_JHDJ01000150.1 Protein Homology CDS 62055 63413 . - 0 ID=cds-WP_000438807.1;Parent=gene-AD08_RS12735;Dbxref=Genbank:WP_000438807.1;Name=WP_000438807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416283.1;locus_tag=AD08_RS12735;product=MFS transporter;protein_id=WP_000438807.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 63530 64288 . - . ID=gene-AD08_RS12730;Name=AD08_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12730;old_locus_tag=AD08_2018 NZ_JHDJ01000150.1 Protein Homology CDS 63530 64288 . - 0 ID=cds-WP_032218764.1;Parent=gene-AD08_RS12730;Dbxref=Genbank:WP_032218764.1;Name=WP_032218764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416284.1;locus_tag=AD08_RS12730;product=DeoR/GlpR transcriptional regulator;protein_id=WP_032218764.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 64425 65405 . - . ID=gene-AD08_RS12725;Name=ydjG;gbkey=Gene;gene=ydjG;gene_biotype=protein_coding;locus_tag=AD08_RS12725;old_locus_tag=AD08_2019 NZ_JHDJ01000150.1 Protein Homology CDS 64425 65405 . - 0 ID=cds-WP_000723710.1;Parent=gene-AD08_RS12725;Dbxref=Genbank:WP_000723710.1;Name=WP_000723710.1;gbkey=CDS;gene=ydjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416285.1;locus_tag=AD08_RS12725;product=NADH-dependent methylglyoxal reductase;protein_id=WP_000723710.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 65415 66362 . - . ID=gene-AD08_RS12720;Name=AD08_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12720;old_locus_tag=AD08_2020 NZ_JHDJ01000150.1 Protein Homology CDS 65415 66362 . - 0 ID=cds-WP_000369231.1;Parent=gene-AD08_RS12720;Dbxref=Genbank:WP_000369231.1;Name=WP_000369231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416286.4;locus_tag=AD08_RS12720;product=carbohydrate kinase family protein;protein_id=WP_000369231.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 66367 67203 . - . ID=gene-AD08_RS12715;Name=AD08_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12715;old_locus_tag=AD08_2021 NZ_JHDJ01000150.1 Protein Homology CDS 66367 67203 . - 0 ID=cds-WP_000878893.1;Parent=gene-AD08_RS12715;Dbxref=Genbank:WP_000878893.1;Name=WP_000878893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=AD08_RS12715;product=ketose-bisphosphate aldolase;protein_id=WP_000878893.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 67224 68267 . - . ID=gene-AD08_RS12710;Name=AD08_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12710;old_locus_tag=AD08_2022 NZ_JHDJ01000150.1 Protein Homology CDS 67224 68267 . - 0 ID=cds-WP_000798110.1;Parent=gene-AD08_RS12710;Dbxref=Genbank:WP_000798110.1;Name=WP_000798110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=AD08_RS12710;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_000798110.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 68284 69663 . - . ID=gene-AD08_RS12705;Name=AD08_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12705;old_locus_tag=AD08_2023 NZ_JHDJ01000150.1 Protein Homology CDS 68284 69663 . - 0 ID=cds-WP_000435292.1;Parent=gene-AD08_RS12705;Dbxref=Genbank:WP_000435292.1;Name=WP_000435292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=AD08_RS12705;product=MFS transporter;protein_id=WP_000435292.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 69690 70766 . - . ID=gene-AD08_RS12700;Name=AD08_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12700;old_locus_tag=AD08_2024 NZ_JHDJ01000150.1 Protein Homology CDS 69690 70766 . - 0 ID=cds-WP_000645221.1;Parent=gene-AD08_RS12700;Dbxref=Genbank:WP_000645221.1;Name=WP_000645221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416290.1;locus_tag=AD08_RS12700;product=zinc-binding dehydrogenase;protein_id=WP_000645221.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 71136 71408 . - . ID=gene-AD08_RS12695;Name=AD08_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12695;old_locus_tag=AD08_2025 NZ_JHDJ01000150.1 Protein Homology CDS 71136 71408 . - 0 ID=cds-WP_001300415.1;Parent=gene-AD08_RS12695;Dbxref=Genbank:WP_001300415.1;Name=WP_001300415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416291.4;locus_tag=AD08_RS12695;product=YeaC family protein;protein_id=WP_001300415.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 71450 71863 . - . ID=gene-AD08_RS12690;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=AD08_RS12690;old_locus_tag=AD08_2026 NZ_JHDJ01000150.1 Protein Homology CDS 71450 71863 . - 0 ID=cds-WP_001284618.1;Parent=gene-AD08_RS12690;Dbxref=Genbank:WP_001284618.1;Name=WP_001284618.1;gbkey=CDS;gene=msrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=AD08_RS12690;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001284618.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 72205 73200 . + . ID=gene-AD08_RS12685;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=AD08_RS12685;old_locus_tag=AD08_2027 NZ_JHDJ01000150.1 Protein Homology CDS 72205 73200 . + 0 ID=cds-WP_000153502.1;Parent=gene-AD08_RS12685;Dbxref=Genbank:WP_000153502.1;Name=WP_000153502.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310515.1;locus_tag=AD08_RS12685;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153502.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 73284 74168 . + . ID=gene-AD08_RS12680;Name=AD08_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12680;old_locus_tag=AD08_2028 NZ_JHDJ01000150.1 Protein Homology CDS 73284 74168 . + 0 ID=cds-WP_001335909.1;Parent=gene-AD08_RS12680;Dbxref=Genbank:WP_001335909.1;Name=WP_001335909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416294.4;locus_tag=AD08_RS12680;product=D-hexose-6-phosphate mutarotase;protein_id=WP_001335909.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 74216 75070 . - . ID=gene-AD08_RS12675;Name=yeaE;gbkey=Gene;gene=yeaE;gene_biotype=protein_coding;locus_tag=AD08_RS12675;old_locus_tag=AD08_2029 NZ_JHDJ01000150.1 Protein Homology CDS 74216 75070 . - 0 ID=cds-WP_001186371.1;Parent=gene-AD08_RS12675;Dbxref=Genbank:WP_001186371.1;Name=WP_001186371.1;gbkey=CDS;gene=yeaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416295.1;locus_tag=AD08_RS12675;product=methylglyoxal reductase YeaE;protein_id=WP_001186371.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 75160 75906 . - . ID=gene-AD08_RS12670;Name=AD08_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12670;old_locus_tag=AD08_2030 NZ_JHDJ01000150.1 Protein Homology CDS 75160 75906 . - 0 ID=cds-WP_032218765.1;Parent=gene-AD08_RS12670;Dbxref=Genbank:WP_032218765.1;Name=WP_032218765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416296.1;locus_tag=AD08_RS12670;product=scaffolding protein MipA;protein_id=WP_032218765.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 76342 78276 . + . ID=gene-AD08_RS12665;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=AD08_RS12665;old_locus_tag=AD08_2031 NZ_JHDJ01000150.1 Protein Homology CDS 76342 78276 . + 0 ID=cds-WP_032218767.1;Parent=gene-AD08_RS12665;Dbxref=Genbank:WP_032218767.1;Name=WP_032218767.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310519.1;locus_tag=AD08_RS12665;product=protein kinase YeaG;protein_id=WP_032218767.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 78389 79672 . + . ID=gene-AD08_RS12660;Name=AD08_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12660;old_locus_tag=AD08_2032 NZ_JHDJ01000150.1 Protein Homology CDS 78389 79672 . + 0 ID=cds-WP_000219687.1;Parent=gene-AD08_RS12660;Dbxref=Genbank:WP_000219687.1;Name=WP_000219687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416298.1;locus_tag=AD08_RS12660;product=YeaH/YhbH family protein;protein_id=WP_000219687.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 79819 81294 . + . ID=gene-AD08_RS12655;Name=AD08_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12655;old_locus_tag=AD08_2033 NZ_JHDJ01000150.1 Protein Homology CDS 79819 81294 . + 0 ID=cds-WP_000616433.1;Parent=gene-AD08_RS12655;Dbxref=Genbank:WP_000616433.1;Name=WP_000616433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416299.1;locus_tag=AD08_RS12655;product=GGDEF domain-containing protein;protein_id=WP_000616433.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq pseudogene 81475 82892 . + . ID=gene-AD08_RS0125920;Name=AD08_RS0125920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125920;pseudo=true NZ_JHDJ01000150.1 Protein Homology CDS 81475 82892 . + 0 ID=cds-AD08_RS0125920;Parent=gene-AD08_RS0125920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416300.2;locus_tag=AD08_RS0125920;product=diguanylate cyclase;pseudo=true;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 82935 83438 . + . ID=gene-AD08_RS12650;Name=yeaK;gbkey=Gene;gene=yeaK;gene_biotype=protein_coding;locus_tag=AD08_RS12650;old_locus_tag=AD08_2035 NZ_JHDJ01000150.1 Protein Homology CDS 82935 83438 . + 0 ID=cds-WP_000138043.1;Parent=gene-AD08_RS12650;Dbxref=Genbank:WP_000138043.1;Name=WP_000138043.1;gbkey=CDS;gene=yeaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310523.1;locus_tag=AD08_RS12650;product=mischarged aminoacyl-tRNA deacylase;protein_id=WP_000138043.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 83439 83543 . - . ID=gene-AD08_RS0125925;Name=AD08_RS0125925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125925 NZ_JHDJ01000150.1 Protein Homology CDS 83439 83543 . - 0 ID=cds-WP_000999630.1;Parent=gene-AD08_RS0125925;Dbxref=Genbank:WP_000999630.1;Name=WP_000999630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416302.2;locus_tag=AD08_RS0125925;product=hypothetical protein;protein_id=WP_000999630.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 83713 84159 . + . ID=gene-AD08_RS12645;Name=AD08_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12645;old_locus_tag=AD08_2036 NZ_JHDJ01000150.1 Protein Homology CDS 83713 84159 . + 0 ID=cds-WP_000460707.1;Parent=gene-AD08_RS12645;Dbxref=Genbank:WP_000460707.1;Name=WP_000460707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416303.1;locus_tag=AD08_RS12645;product=DUF441 domain-containing protein;protein_id=WP_000460707.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 84116 84937 . - . ID=gene-AD08_RS12640;Name=AD08_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12640;old_locus_tag=AD08_2037 NZ_JHDJ01000150.1 Protein Homology CDS 84116 84937 . - 0 ID=cds-WP_032195527.1;Parent=gene-AD08_RS12640;Dbxref=Genbank:WP_032195527.1;Name=WP_032195527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416304.1;locus_tag=AD08_RS12640;product=DNA-binding transcriptional regulator NimR;protein_id=WP_032195527.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 85034 86215 . + . ID=gene-AD08_RS12635;Name=nimT;gbkey=Gene;gene=nimT;gene_biotype=protein_coding;locus_tag=AD08_RS12635;old_locus_tag=AD08_2038 NZ_JHDJ01000150.1 Protein Homology CDS 85034 86215 . + 0 ID=cds-WP_001645373.1;Parent=gene-AD08_RS12635;Dbxref=Genbank:WP_001645373.1;Name=WP_001645373.1;gbkey=CDS;gene=nimT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416305.1;locus_tag=AD08_RS12635;product=2-nitroimidazole transporter;protein_id=WP_001645373.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 86270 86617 . + . ID=gene-AD08_RS12630;Name=AD08_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12630;old_locus_tag=AD08_2039 NZ_JHDJ01000150.1 Protein Homology CDS 86270 86617 . + 0 ID=cds-WP_001326526.1;Parent=gene-AD08_RS12630;Dbxref=Genbank:WP_001326526.1;Name=WP_001326526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416306.2;locus_tag=AD08_RS12630;product=DUF488 domain-containing protein;protein_id=WP_001326526.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 86639 86893 . - . ID=gene-AD08_RS12625;Name=yoaF;gbkey=Gene;gene=yoaF;gene_biotype=protein_coding;locus_tag=AD08_RS12625;old_locus_tag=AD08_2040 NZ_JHDJ01000150.1 Protein Homology CDS 86639 86893 . - 0 ID=cds-WP_000691930.1;Parent=gene-AD08_RS12625;Dbxref=Genbank:WP_000691930.1;Name=WP_000691930.1;gbkey=CDS;gene=yoaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416307.1;locus_tag=AD08_RS12625;product=DUF333 domain-containing lipoprotein YoaF;protein_id=WP_000691930.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 87076 88101 . + . ID=gene-AD08_RS12620;Name=dgcP;gbkey=Gene;gene=dgcP;gene_biotype=protein_coding;locus_tag=AD08_RS12620;old_locus_tag=AD08_2041 NZ_JHDJ01000150.1 Protein Homology CDS 87076 88101 . + 0 ID=cds-WP_032218770.1;Parent=gene-AD08_RS12620;Dbxref=Genbank:WP_032218770.1;Name=WP_032218770.1;gbkey=CDS;gene=dgcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416308.4;locus_tag=AD08_RS12620;product=diguanylate cyclase DgcP;protein_id=WP_032218770.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 88134 88232 . + . ID=gene-AD08_RS0125930;Name=yoaK;gbkey=Gene;gene=yoaK;gene_biotype=protein_coding;locus_tag=AD08_RS0125930 NZ_JHDJ01000150.1 Protein Homology CDS 88134 88232 . + 0 ID=cds-WP_001219350.1;Parent=gene-AD08_RS0125930;Dbxref=Genbank:WP_001219350.1;Name=WP_001219350.1;gbkey=CDS;gene=yoaK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=AD08_RS0125930;product=YoaK family small membrane protein;protein_id=WP_001219350.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 88235 88309 . + . ID=gene-AD08_RS30490;Name=yoaJ;gbkey=Gene;gene=yoaJ;gene_biotype=protein_coding;locus_tag=AD08_RS30490 NZ_JHDJ01000150.1 Protein Homology CDS 88235 88309 . + 0 ID=cds-WP_001386836.1;Parent=gene-AD08_RS30490;Dbxref=Genbank:WP_001386836.1;Name=WP_001386836.1;gbkey=CDS;gene=yoaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791243.1;locus_tag=AD08_RS30490;product=protein YoaJ;protein_id=WP_001386836.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 88368 88616 . - . ID=gene-AD08_RS12615;Name=AD08_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12615;old_locus_tag=AD08_2043 NZ_JHDJ01000150.1 Protein Homology CDS 88368 88616 . - 0 ID=cds-WP_000512153.1;Parent=gene-AD08_RS12615;Dbxref=Genbank:WP_000512153.1;Name=WP_000512153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310531.1;locus_tag=AD08_RS12615;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512153.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 88764 88946 . - . ID=gene-AD08_RS12610;Name=AD08_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12610;old_locus_tag=AD08_2044 NZ_JHDJ01000150.1 Protein Homology CDS 88764 88946 . - 0 ID=cds-WP_000513737.1;Parent=gene-AD08_RS12610;Dbxref=Genbank:WP_000513737.1;Name=WP_000513737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310532.1;locus_tag=AD08_RS12610;product=DUF1869 domain-containing protein;protein_id=WP_000513737.1;transl_table=11 NZ_JHDJ01000150.1 RefSeq pseudogene 88950 89198 . - . ID=gene-AD08_RS12605;Name=yeaR;end_range=89198,.;gbkey=Gene;gene=yeaR;gene_biotype=pseudogene;locus_tag=AD08_RS12605;old_locus_tag=AD08_2045;partial=true;pseudo=true NZ_JHDJ01000150.1 Protein Homology CDS 88950 89198 . - 0 ID=cds-AD08_RS12605;Parent=gene-AD08_RS12605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=89198,.;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310533.1;locus_tag=AD08_RS12605;partial=true;product=DUF1971 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDJ01000150.1 RefSeq gene 89253 90365 . + . ID=gene-AD08_RS12600;Name=AD08_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12600;old_locus_tag=AD08_2046 NZ_JHDJ01000150.1 Protein Homology CDS 89253 90365 . + 0 ID=cds-WP_001300563.1-7;Parent=gene-AD08_RS12600;Dbxref=Genbank:WP_001300563.1;Name=WP_001300563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS12600;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 ##sequence-region NZ_JHDJ01000151.1 1 74395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000151.1 RefSeq region 1 74395 . + . ID=NZ_JHDJ01000151.1:1..74395;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000151.1 RefSeq gene 1 1068 . + . ID=gene-AD08_RS12595;Name=AD08_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12595;old_locus_tag=AD08_2047;partial=true;start_range=.,1 NZ_JHDJ01000151.1 Protein Homology CDS 1 1068 . + 0 ID=cds-WP_032218773.1;Parent=gene-AD08_RS12595;Dbxref=Genbank:WP_032218773.1;Name=WP_032218773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS12595;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032218773.1;start_range=.,1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 1179 1361 . - . ID=gene-AD08_RS0125935;Name=AD08_RS0125935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125935 NZ_JHDJ01000151.1 Protein Homology CDS 1179 1361 . - 0 ID=cds-WP_000939310.1;Parent=gene-AD08_RS0125935;Dbxref=Genbank:WP_000939310.1;Name=WP_000939310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403667.1;locus_tag=AD08_RS0125935;product=DUF1971 domain-containing protein;protein_id=WP_000939310.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 1534 2172 . - . ID=gene-AD08_RS12590;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=AD08_RS12590;old_locus_tag=AD08_2049 NZ_JHDJ01000151.1 Protein Homology CDS 1534 2172 . - 0 ID=cds-WP_000457206.1;Parent=gene-AD08_RS12590;Dbxref=Genbank:WP_000457206.1;Name=WP_000457206.1;gbkey=CDS;gene=leuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416312.1;locus_tag=AD08_RS12590;product=leucine efflux protein LeuE;protein_id=WP_000457206.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 2299 3222 . - . ID=gene-AD08_RS12585;Name=AD08_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12585;old_locus_tag=AD08_2050 NZ_JHDJ01000151.1 Protein Homology CDS 2299 3222 . - 0 ID=cds-WP_001300522.1;Parent=gene-AD08_RS12585;Dbxref=Genbank:WP_001300522.1;Name=WP_001300522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310535.2;locus_tag=AD08_RS12585;product=DNA-binding transcriptional regulator DmlR;protein_id=WP_001300522.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 3325 4410 . + . ID=gene-AD08_RS12580;Name=dmlA;gbkey=Gene;gene=dmlA;gene_biotype=protein_coding;locus_tag=AD08_RS12580;old_locus_tag=AD08_2051 NZ_JHDJ01000151.1 Protein Homology CDS 3325 4410 . + 0 ID=cds-WP_000978494.1;Parent=gene-AD08_RS12580;Dbxref=Genbank:WP_000978494.1;Name=WP_000978494.1;gbkey=CDS;gene=dmlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416314.1;locus_tag=AD08_RS12580;product=multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase;protein_id=WP_000978494.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 4601 6046 . + . ID=gene-AD08_RS12575;Name=AD08_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12575;old_locus_tag=AD08_2052 NZ_JHDJ01000151.1 Protein Homology CDS 4601 6046 . + 0 ID=cds-WP_001301380.1;Parent=gene-AD08_RS12575;Dbxref=Genbank:WP_001301380.1;Name=WP_001301380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416315.1;locus_tag=AD08_RS12575;product=BCCT family transporter;protein_id=WP_001301380.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 6078 7202 . + . ID=gene-AD08_RS12570;Name=yeaW;gbkey=Gene;gene=yeaW;gene_biotype=protein_coding;locus_tag=AD08_RS12570;old_locus_tag=AD08_2053 NZ_JHDJ01000151.1 Protein Homology CDS 6078 7202 . + 0 ID=cds-WP_000067822.1;Parent=gene-AD08_RS12570;Dbxref=Genbank:WP_000067822.1;Name=WP_000067822.1;gbkey=CDS;gene=yeaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310538.1;locus_tag=AD08_RS12570;product=carnitine monooxygenase subunit YeaW;protein_id=WP_000067822.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 7258 8223 . + . ID=gene-AD08_RS12565;Name=yeaX;gbkey=Gene;gene=yeaX;gene_biotype=protein_coding;locus_tag=AD08_RS12565;old_locus_tag=AD08_2054 NZ_JHDJ01000151.1 Protein Homology CDS 7258 8223 . + 0 ID=cds-WP_001287026.1;Parent=gene-AD08_RS12565;Dbxref=Genbank:WP_001287026.1;Name=WP_001287026.1;gbkey=CDS;gene=yeaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416317.1;locus_tag=AD08_RS12565;product=carnitine monooxygenase subunit YeaX;protein_id=WP_001287026.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 8277 9392 . - . ID=gene-AD08_RS12560;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=AD08_RS12560;old_locus_tag=AD08_2055 NZ_JHDJ01000151.1 Protein Homology CDS 8277 9392 . - 0 ID=cds-WP_032218774.1;Parent=gene-AD08_RS12560;Dbxref=Genbank:WP_032218774.1;Name=WP_032218774.1;gbkey=CDS;gene=rnd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707318.2;locus_tag=AD08_RS12560;product=ribonuclease D;protein_id=WP_032218774.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 9474 11159 . - . ID=gene-AD08_RS12555;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=AD08_RS12555;old_locus_tag=AD08_2056 NZ_JHDJ01000151.1 Protein Homology CDS 9474 11159 . - 0 ID=cds-WP_000758422.1;Parent=gene-AD08_RS12555;Dbxref=Genbank:WP_000758422.1;Name=WP_000758422.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416319.1;locus_tag=AD08_RS12555;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758422.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 11364 11945 . - . ID=gene-AD08_RS12550;Name=yeaY;gbkey=Gene;gene=yeaY;gene_biotype=protein_coding;locus_tag=AD08_RS12550;old_locus_tag=AD08_2057 NZ_JHDJ01000151.1 Protein Homology CDS 11364 11945 . - 0 ID=cds-WP_000290576.1;Parent=gene-AD08_RS12550;Dbxref=Genbank:WP_000290576.1;Name=WP_000290576.1;gbkey=CDS;gene=yeaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416320.1;locus_tag=AD08_RS12550;product=Slp family lipoprotein YeaY;protein_id=WP_000290576.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 11985 12680 . - . ID=gene-AD08_RS12545;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=AD08_RS12545;old_locus_tag=AD08_2058 NZ_JHDJ01000151.1 Protein Homology CDS 11985 12680 . - 0 ID=cds-WP_001220966.1;Parent=gene-AD08_RS12545;Dbxref=Genbank:WP_001220966.1;Name=WP_001220966.1;gbkey=CDS;gene=tsaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416321.1;locus_tag=AD08_RS12545;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001220966.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 12738 14648 . - . ID=gene-AD08_RS12540;Name=AD08_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12540;old_locus_tag=AD08_2059 NZ_JHDJ01000151.1 Protein Homology CDS 12738 14648 . - 0 ID=cds-WP_000128847.1;Parent=gene-AD08_RS12540;Dbxref=Genbank:WP_000128847.1;Name=WP_000128847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310544.1;locus_tag=AD08_RS12540;product=ATP-dependent DNA helicase;protein_id=WP_000128847.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 14780 15124 . + . ID=gene-AD08_RS12535;Name=AD08_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12535;old_locus_tag=AD08_2060 NZ_JHDJ01000151.1 Protein Homology CDS 14780 15124 . + 0 ID=cds-WP_001295493.1;Parent=gene-AD08_RS12535;Dbxref=Genbank:WP_001295493.1;Name=WP_001295493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416323.4;locus_tag=AD08_RS12535;product=RidA family protein;protein_id=WP_001295493.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 15486 15845 . + . ID=gene-AD08_RS12530;Name=AD08_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12530;old_locus_tag=AD08_2062 NZ_JHDJ01000151.1 Protein Homology CDS 15486 15845 . + 0 ID=cds-WP_071995826.1;Parent=gene-AD08_RS12530;Dbxref=Genbank:WP_071995826.1;Name=WP_071995826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001331208.1;locus_tag=AD08_RS12530;product=DUF1889 family protein;protein_id=WP_071995826.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 15965 16144 . - . ID=gene-AD08_RS12525;Name=AD08_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12525;old_locus_tag=AD08_2063 NZ_JHDJ01000151.1 Protein Homology CDS 15965 16144 . - 0 ID=cds-WP_000457334.1;Parent=gene-AD08_RS12525;Dbxref=Genbank:WP_000457334.1;Name=WP_000457334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310547.1;locus_tag=AD08_RS12525;product=YoaH family protein;protein_id=WP_000457334.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 16218 17579 . + . ID=gene-AD08_RS12520;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=AD08_RS12520;old_locus_tag=AD08_2064 NZ_JHDJ01000151.1 Protein Homology CDS 16218 17579 . + 0 ID=cds-WP_001637998.1;Parent=gene-AD08_RS12520;Dbxref=Genbank:WP_001637998.1;Name=WP_001637998.1;gbkey=CDS;gene=pabB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416326.1;locus_tag=AD08_RS12520;product=aminodeoxychorismate synthase component 1;protein_id=WP_001637998.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 17583 18161 . + . ID=gene-AD08_RS12515;Name=AD08_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12515;old_locus_tag=AD08_2065 NZ_JHDJ01000151.1 Protein Homology CDS 17583 18161 . + 0 ID=cds-WP_000456715.1;Parent=gene-AD08_RS12515;Dbxref=Genbank:WP_000456715.1;Name=WP_000456715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416327.1;locus_tag=AD08_RS12515;product=CoA pyrophosphatase;protein_id=WP_000456715.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 18345 19709 . + . ID=gene-AD08_RS12510;Name=AD08_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12510;old_locus_tag=AD08_2066 NZ_JHDJ01000151.1 Protein Homology CDS 18345 19709 . + 0 ID=cds-WP_000624298.1;Parent=gene-AD08_RS12510;Dbxref=Genbank:WP_000624298.1;Name=WP_000624298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416328.1;locus_tag=AD08_RS12510;product=L-serine ammonia-lyase;protein_id=WP_000624298.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq pseudogene 19840 20028 . + . ID=gene-AD08_RS30495;Name=AD08_RS30495;end_range=20028,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30495;partial=true;pseudo=true NZ_JHDJ01000151.1 Protein Homology CDS 19840 20028 . + 0 ID=cds-AD08_RS30495;Parent=gene-AD08_RS30495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=20028,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707307.2;locus_tag=AD08_RS30495;partial=true;product=cyclic diguanylate phosphodiesterase;pseudo=true;transl_table=11 NZ_JHDJ01000151.1 RefSeq pseudogene 20085 20782 . + . ID=gene-AD08_RS30500;Name=AD08_RS30500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30500;pseudo=true NZ_JHDJ01000151.1 Protein Homology CDS 20085 20782 . + 0 ID=cds-AD08_RS30500;Parent=gene-AD08_RS30500;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS30500;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_JHDJ01000151.1 RefSeq pseudogene 20797 22215 . + . ID=gene-AD08_RS12495;Name=AD08_RS12495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS12495;old_locus_tag=AD08_2069;partial=true;pseudo=true;start_range=.,20797 NZ_JHDJ01000151.1 Protein Homology CDS 20797 22215 . + 0 ID=cds-AD08_RS12495;Parent=gene-AD08_RS12495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416329.4;locus_tag=AD08_RS12495;partial=true;product=cyclic diguanylate phosphodiesterase;pseudo=true;start_range=.,20797;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 22219 23775 . - . ID=gene-AD08_RS12490;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=AD08_RS12490;old_locus_tag=AD08_2070 NZ_JHDJ01000151.1 Protein Homology CDS 22219 23775 . - 0 ID=cds-WP_000394983.1;Parent=gene-AD08_RS12490;Dbxref=Genbank:WP_000394983.1;Name=WP_000394983.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310552.1;locus_tag=AD08_RS12490;product=CNNM family cation transport protein YoaE;protein_id=WP_000394983.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 24238 25209 . + . ID=gene-AD08_RS12485;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=AD08_RS12485;old_locus_tag=AD08_2071 NZ_JHDJ01000151.1 Protein Homology CDS 24238 25209 . + 0 ID=cds-WP_000150543.1;Parent=gene-AD08_RS12485;Dbxref=Genbank:WP_000150543.1;Name=WP_000150543.1;gbkey=CDS;gene=manX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310554.1;locus_tag=AD08_RS12485;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150543.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 25272 26072 . + . ID=gene-AD08_RS12480;Name=AD08_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12480;old_locus_tag=AD08_2072 NZ_JHDJ01000151.1 Protein Homology CDS 25272 26072 . + 0 ID=cds-WP_000406926.1;Parent=gene-AD08_RS12480;Dbxref=Genbank:WP_000406926.1;Name=WP_000406926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=AD08_RS12480;product=PTS mannose transporter subunit IIC;protein_id=WP_000406926.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 26085 26936 . + . ID=gene-AD08_RS12475;Name=AD08_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12475;old_locus_tag=AD08_2073 NZ_JHDJ01000151.1 Protein Homology CDS 26085 26936 . + 0 ID=cds-WP_001372555.1;Parent=gene-AD08_RS12475;Dbxref=Genbank:WP_001372555.1;Name=WP_001372555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804907.1;locus_tag=AD08_RS12475;product=PTS mannose transporter subunit IID;protein_id=WP_001372555.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 26991 27449 . + . ID=gene-AD08_RS12470;Name=AD08_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12470;old_locus_tag=AD08_2074 NZ_JHDJ01000151.1 Protein Homology CDS 26991 27449 . + 0 ID=cds-WP_000156255.1;Parent=gene-AD08_RS12470;Dbxref=Genbank:WP_000156255.1;Name=WP_000156255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=AD08_RS12470;product=DUF986 domain-containing protein;protein_id=WP_000156255.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 27878 28444 . + . ID=gene-AD08_RS12465;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=AD08_RS12465;old_locus_tag=AD08_2075 NZ_JHDJ01000151.1 Protein Homology CDS 27878 28444 . + 0 ID=cds-WP_001296134.1;Parent=gene-AD08_RS12465;Dbxref=Genbank:WP_001296134.1;Name=WP_001296134.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=AD08_RS12465;product=manganese efflux pump MntP;protein_id=WP_001296134.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 28441 29250 . - . ID=gene-AD08_RS12460;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=AD08_RS12460;old_locus_tag=AD08_2076 NZ_JHDJ01000151.1 Protein Homology CDS 28441 29250 . - 0 ID=cds-WP_000010115.1;Parent=gene-AD08_RS12460;Dbxref=Genbank:WP_000010115.1;Name=WP_000010115.1;gbkey=CDS;gene=rlmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416336.1;locus_tag=AD08_RS12460;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010115.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 29416 29625 . - . ID=gene-AD08_RS12455;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AD08_RS12455;old_locus_tag=AD08_2077 NZ_JHDJ01000151.1 Protein Homology CDS 29416 29625 . - 0 ID=cds-WP_001062678.1;Parent=gene-AD08_RS12455;Dbxref=Genbank:WP_001062678.1;Name=WP_001062678.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=AD08_RS12455;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 29638 29781 . - . ID=gene-AD08_RS12450;Name=AD08_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12450;old_locus_tag=AD08_2078 NZ_JHDJ01000151.1 Protein Homology CDS 29638 29781 . - 0 ID=cds-WP_001295496.1;Parent=gene-AD08_RS12450;Dbxref=Genbank:WP_001295496.1;Name=WP_001295496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416338.1;locus_tag=AD08_RS12450;product=YobF family protein;protein_id=WP_001295496.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 30451 30738 . - . ID=gene-AD08_RS12445;Name=AD08_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12445;old_locus_tag=AD08_2079 NZ_JHDJ01000151.1 Protein Homology CDS 30451 30738 . - 0 ID=cds-WP_001006866.1;Parent=gene-AD08_RS12445;Dbxref=Genbank:WP_001006866.1;Name=WP_001006866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416339.1;locus_tag=AD08_RS12445;product=hypothetical protein;protein_id=WP_001006866.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 30813 30956 . - . ID=gene-AD08_RS12440;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=AD08_RS12440;old_locus_tag=AD08_2080 NZ_JHDJ01000151.1 Protein Homology CDS 30813 30956 . - 0 ID=cds-WP_000714550.1;Parent=gene-AD08_RS12440;Dbxref=Genbank:WP_000714550.1;Name=WP_000714550.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416340.1;locus_tag=AD08_RS12440;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714550.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 31115 31354 . + . ID=gene-AD08_RS12435;Name=AD08_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12435;old_locus_tag=AD08_2081 NZ_JHDJ01000151.1 Protein Homology CDS 31115 31354 . + 0 ID=cds-WP_001211011.1;Parent=gene-AD08_RS12435;Dbxref=Genbank:WP_001211011.1;Name=WP_001211011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588456.1;locus_tag=AD08_RS12435;product=hypothetical protein;protein_id=WP_001211011.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 31498 32289 . - . ID=gene-AD08_RS12430;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=AD08_RS12430;old_locus_tag=AD08_2082 NZ_JHDJ01000151.1 Protein Homology CDS 31498 32289 . - 0 ID=cds-WP_001262203.1;Parent=gene-AD08_RS12430;Dbxref=Genbank:WP_001262203.1;Name=WP_001262203.1;gbkey=CDS;gene=kdgR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132042.1;locus_tag=AD08_RS12430;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262203.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 32466 33839 . + . ID=gene-AD08_RS12425;Name=AD08_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12425;old_locus_tag=AD08_2083 NZ_JHDJ01000151.1 Protein Homology CDS 32466 33839 . + 0 ID=cds-WP_001127216.1;Parent=gene-AD08_RS12425;Dbxref=Genbank:WP_001127216.1;Name=WP_001127216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416342.4;locus_tag=AD08_RS12425;product=MFS transporter;protein_id=WP_001127216.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 33885 34766 . - . ID=gene-AD08_RS12420;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=AD08_RS12420;old_locus_tag=AD08_2084 NZ_JHDJ01000151.1 Protein Homology CDS 33885 34766 . - 0 ID=cds-WP_032183076.1;Parent=gene-AD08_RS12420;Dbxref=Genbank:WP_032183076.1;Name=WP_032183076.1;gbkey=CDS;gene=htpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=AD08_RS12420;product=protease HtpX;protein_id=WP_032183076.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 34958 37006 . - . ID=gene-AD08_RS12415;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=AD08_RS12415;old_locus_tag=AD08_2085 NZ_JHDJ01000151.1 Protein Homology CDS 34958 37006 . - 0 ID=cds-WP_001055791.1;Parent=gene-AD08_RS12415;Dbxref=Genbank:WP_001055791.1;Name=WP_001055791.1;gbkey=CDS;gene=prc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416344.1;locus_tag=AD08_RS12415;product=carboxy terminal-processing peptidase;protein_id=WP_001055791.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 37026 37724 . - . ID=gene-AD08_RS12410;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=AD08_RS12410;old_locus_tag=AD08_2086 NZ_JHDJ01000151.1 Protein Homology CDS 37026 37724 . - 0 ID=cds-WP_000431381.1;Parent=gene-AD08_RS12410;Dbxref=Genbank:WP_000431381.1;Name=WP_000431381.1;gbkey=CDS;gene=proQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026161.1;locus_tag=AD08_RS12410;product=RNA chaperone ProQ;protein_id=WP_000431381.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 37821 38318 . - . ID=gene-AD08_RS12405;Name=AD08_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12405;old_locus_tag=AD08_2087 NZ_JHDJ01000151.1 Protein Homology CDS 37821 38318 . - 0 ID=cds-WP_001043877.1;Parent=gene-AD08_RS12405;Dbxref=Genbank:WP_001043877.1;Name=WP_001043877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416346.4;locus_tag=AD08_RS12405;product=L-methionine (R)-S-oxide reductase;protein_id=WP_001043877.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 38448 39731 . + . ID=gene-AD08_RS12400;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=AD08_RS12400;old_locus_tag=AD08_2088 NZ_JHDJ01000151.1 Protein Homology CDS 38448 39731 . + 0 ID=cds-WP_001207282.1;Parent=gene-AD08_RS12400;Dbxref=Genbank:WP_001207282.1;Name=WP_001207282.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310570.1;locus_tag=AD08_RS12400;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207282.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 39700 42333 . + . ID=gene-AD08_RS12395;Name=yebT;gbkey=Gene;gene=yebT;gene_biotype=protein_coding;locus_tag=AD08_RS12395;old_locus_tag=AD08_2089 NZ_JHDJ01000151.1 Protein Homology CDS 39700 42333 . + 0 ID=cds-WP_001326728.1;Parent=gene-AD08_RS12395;Dbxref=Genbank:WP_001326728.1;Name=WP_001326728.1;gbkey=CDS;gene=yebT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=AD08_RS12395;product=lipid-binding membrane homeostasis protein YebT;protein_id=WP_001326728.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 42413 43852 . + . ID=gene-AD08_RS12390;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=AD08_RS12390;old_locus_tag=AD08_2090 NZ_JHDJ01000151.1 Protein Homology CDS 42413 43852 . + 0 ID=cds-WP_001352260.1;Parent=gene-AD08_RS12390;Dbxref=Genbank:WP_001352260.1;Name=WP_001352260.1;gbkey=CDS;gene=rsmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416349.2;locus_tag=AD08_RS12390;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_001352260.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 43970 44206 . + . ID=gene-AD08_RS12385;Name=AD08_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12385;old_locus_tag=AD08_2091 NZ_JHDJ01000151.1 Protein Homology CDS 43970 44206 . + 0 ID=cds-WP_001295499.1;Parent=gene-AD08_RS12385;Dbxref=Genbank:WP_001295499.1;Name=WP_001295499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=AD08_RS12385;product=DUF1480 family protein;protein_id=WP_001295499.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 44227 44502 . + . ID=gene-AD08_RS12380;Name=AD08_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12380;old_locus_tag=AD08_2092 NZ_JHDJ01000151.1 Protein Homology CDS 44227 44502 . + 0 ID=cds-WP_000929532.1;Parent=gene-AD08_RS12380;Dbxref=Genbank:WP_000929532.1;Name=WP_000929532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310574.1;locus_tag=AD08_RS12380;product=YebW family protein;protein_id=WP_000929532.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 44503 45159 . - . ID=gene-AD08_RS12375;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=AD08_RS12375;old_locus_tag=AD08_2093 NZ_JHDJ01000151.1 Protein Homology CDS 44503 45159 . - 0 ID=cds-WP_000812724.1;Parent=gene-AD08_RS12375;Dbxref=Genbank:WP_000812724.1;Name=WP_000812724.1;gbkey=CDS;gene=pphA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416352.4;locus_tag=AD08_RS12375;product=protein-serine/threonine phosphatase;protein_id=WP_000812724.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 45555 45896 . - . ID=gene-AD08_RS12370;Name=AD08_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12370;old_locus_tag=AD08_2094 NZ_JHDJ01000151.1 Protein Homology CDS 45555 45896 . - 0 ID=cds-WP_000976476.1;Parent=gene-AD08_RS12370;Dbxref=Genbank:WP_000976476.1;Name=WP_000976476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416353.1;locus_tag=AD08_RS12370;product=YebY family protein;protein_id=WP_000976476.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 45909 46781 . - . ID=gene-AD08_RS12365;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=AD08_RS12365;old_locus_tag=AD08_2095 NZ_JHDJ01000151.1 Protein Homology CDS 45909 46781 . - 0 ID=cds-WP_000879289.1;Parent=gene-AD08_RS12365;Dbxref=Genbank:WP_000879289.1;Name=WP_000879289.1;gbkey=CDS;gene=copD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416354.1;locus_tag=AD08_RS12365;product=copper homeostasis membrane protein CopD;protein_id=WP_000879289.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 46785 47159 . - . ID=gene-AD08_RS12360;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=AD08_RS12360;old_locus_tag=AD08_2096 NZ_JHDJ01000151.1 Protein Homology CDS 46785 47159 . - 0 ID=cds-WP_000168747.1;Parent=gene-AD08_RS12360;Dbxref=Genbank:WP_000168747.1;Name=WP_000168747.1;gbkey=CDS;gene=yobA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416355.1;locus_tag=AD08_RS12360;product=CopC domain-containing protein YobA;protein_id=WP_000168747.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 47298 47528 . + . ID=gene-AD08_RS12355;Name=AD08_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12355;old_locus_tag=AD08_2097 NZ_JHDJ01000151.1 Protein Homology CDS 47298 47528 . + 0 ID=cds-WP_000916763.1;Parent=gene-AD08_RS12355;Dbxref=Genbank:WP_000916763.1;Name=WP_000916763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310579.1;locus_tag=AD08_RS12355;product=DNA polymerase III subunit theta;protein_id=WP_000916763.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 47630 48286 . + . ID=gene-AD08_RS12350;Name=AD08_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12350;old_locus_tag=AD08_2098 NZ_JHDJ01000151.1 Protein Homology CDS 47630 48286 . + 0 ID=cds-WP_032218778.1;Parent=gene-AD08_RS12350;Dbxref=Genbank:WP_032218778.1;Name=WP_032218778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416357.1;locus_tag=AD08_RS12350;product=carbon-nitrogen hydrolase family protein;protein_id=WP_032218778.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 48310 48972 . + . ID=gene-AD08_RS12345;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=AD08_RS12345;old_locus_tag=AD08_2099 NZ_JHDJ01000151.1 Protein Homology CDS 48310 48972 . + 0 ID=cds-WP_000944256.1;Parent=gene-AD08_RS12345;Dbxref=Genbank:WP_000944256.1;Name=WP_000944256.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416358.1;locus_tag=AD08_RS12345;product=exodeoxyribonuclease X;protein_id=WP_000944256.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 48969 51029 . - . ID=gene-AD08_RS12340;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=AD08_RS12340;old_locus_tag=AD08_2100 NZ_JHDJ01000151.1 Protein Homology CDS 48969 51029 . - 0 ID=cds-WP_000936927.1;Parent=gene-AD08_RS12340;Dbxref=Genbank:WP_000936927.1;Name=WP_000936927.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416359.1;locus_tag=AD08_RS12340;product=oligopeptidase B;protein_id=WP_000936927.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 51238 51897 . - . ID=gene-AD08_RS12335;Name=AD08_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12335;old_locus_tag=AD08_2101 NZ_JHDJ01000151.1 Protein Homology CDS 51238 51897 . - 0 ID=cds-WP_000024757.1;Parent=gene-AD08_RS12335;Dbxref=Genbank:WP_000024757.1;Name=WP_000024757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416360.1;locus_tag=AD08_RS12335;product=tellurite resistance TerB family protein;protein_id=WP_000024757.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 52224 52580 . - . ID=gene-AD08_RS12330;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=AD08_RS12330;old_locus_tag=AD08_2102 NZ_JHDJ01000151.1 Protein Homology CDS 52224 52580 . - 0 ID=cds-WP_001295500.1;Parent=gene-AD08_RS12330;Dbxref=Genbank:WP_001295500.1;Name=WP_001295500.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310584.2;locus_tag=AD08_RS12330;product=protein YebF;protein_id=WP_001295500.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 52647 52937 . - . ID=gene-AD08_RS12325;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=AD08_RS12325;old_locus_tag=AD08_2103 NZ_JHDJ01000151.1 Protein Homology CDS 52647 52937 . - 0 ID=cds-WP_000257738.1;Parent=gene-AD08_RS12325;Dbxref=Genbank:WP_000257738.1;Name=WP_000257738.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310585.1;locus_tag=AD08_RS12325;product=DNA damage-inducible protein YebG;protein_id=WP_000257738.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 53071 54249 . + . ID=gene-AD08_RS12320;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=AD08_RS12320;old_locus_tag=AD08_2104 NZ_JHDJ01000151.1 Protein Homology CDS 53071 54249 . + 0 ID=cds-WP_000173484.1;Parent=gene-AD08_RS12320;Dbxref=Genbank:WP_000173484.1;Name=WP_000173484.1;gbkey=CDS;gene=purT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416363.1;locus_tag=AD08_RS12320;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_000173484.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 54305 54946 . - . ID=gene-AD08_RS12315;Name=AD08_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12315;old_locus_tag=AD08_2105 NZ_JHDJ01000151.1 Protein Homology CDS 54305 54946 . - 0 ID=cds-WP_000800512.1;Parent=gene-AD08_RS12315;Dbxref=Genbank:WP_000800512.1;Name=WP_000800512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310587.1;locus_tag=AD08_RS12315;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800512.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 54983 56794 . - . ID=gene-AD08_RS12310;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=AD08_RS12310;old_locus_tag=AD08_2106 NZ_JHDJ01000151.1 Protein Homology CDS 54983 56794 . - 0 ID=cds-WP_001069467.1;Parent=gene-AD08_RS12310;Dbxref=Genbank:WP_001069467.1;Name=WP_001069467.1;gbkey=CDS;gene=edd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020244583.1;locus_tag=AD08_RS12310;product=phosphogluconate dehydratase;protein_id=WP_001069467.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 57029 58504 . - . ID=gene-AD08_RS12305;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=AD08_RS12305;old_locus_tag=AD08_2107 NZ_JHDJ01000151.1 Protein Homology CDS 57029 58504 . - 0 ID=cds-WP_000301727.1;Parent=gene-AD08_RS12305;Dbxref=Genbank:WP_000301727.1;Name=WP_000301727.1;gbkey=CDS;gene=zwf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=AD08_RS12305;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301727.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 58842 59711 . + . ID=gene-AD08_RS12295;Name=AD08_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12295;old_locus_tag=AD08_2109 NZ_JHDJ01000151.1 Protein Homology CDS 58842 59711 . + 0 ID=cds-WP_001056706.1;Parent=gene-AD08_RS12295;Dbxref=Genbank:WP_001056706.1;Name=WP_001056706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416367.1;locus_tag=AD08_RS12295;product=DNA-binding transcriptional regulator HexR;protein_id=WP_001056706.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 59839 61281 . + . ID=gene-AD08_RS12290;Name=AD08_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12290;old_locus_tag=AD08_2110 NZ_JHDJ01000151.1 Protein Homology CDS 59839 61281 . + 0 ID=cds-WP_000091148.1;Parent=gene-AD08_RS12290;Dbxref=Genbank:WP_000091148.1;Name=WP_000091148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=AD08_RS12290;product=pyruvate kinase;protein_id=WP_000091148.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 61412 62383 . - . ID=gene-AD08_RS12285;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=AD08_RS12285;old_locus_tag=AD08_2111 NZ_JHDJ01000151.1 Protein Homology CDS 61412 62383 . - 0 ID=cds-WP_000448381.1;Parent=gene-AD08_RS12285;Dbxref=Genbank:WP_000448381.1;Name=WP_000448381.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;gbkey=CDS;gene=lpxM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416369.1;locus_tag=AD08_RS12285;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448381.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 62503 63825 . - . ID=gene-AD08_RS12280;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=AD08_RS12280;old_locus_tag=AD08_2112 NZ_JHDJ01000151.1 Protein Homology CDS 62503 63825 . - 0 ID=cds-WP_001184045.1;Parent=gene-AD08_RS12280;Dbxref=Genbank:WP_001184045.1;Name=WP_001184045.1;gbkey=CDS;gene=mepM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707716.1;locus_tag=AD08_RS12280;product=murein DD-endopeptidase MepM;protein_id=WP_001184045.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 63841 64773 . - . ID=gene-AD08_RS12275;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=AD08_RS12275;old_locus_tag=AD08_2113 NZ_JHDJ01000151.1 Protein Homology CDS 63841 64773 . - 0 ID=cds-WP_001300644.1;Parent=gene-AD08_RS12275;Dbxref=Genbank:WP_001300644.1;Name=WP_001300644.1;gbkey=CDS;gene=znuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=AD08_RS12275;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_001300644.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 64852 65607 . + . ID=gene-AD08_RS12270;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=AD08_RS12270;old_locus_tag=AD08_2114 NZ_JHDJ01000151.1 Protein Homology CDS 64852 65607 . + 0 ID=cds-WP_032218779.1;Parent=gene-AD08_RS12270;Dbxref=Genbank:WP_032218779.1;Name=WP_032218779.1;gbkey=CDS;gene=znuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=AD08_RS12270;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_032218779.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 65604 66389 . + . ID=gene-AD08_RS12265;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=AD08_RS12265;old_locus_tag=AD08_2115 NZ_JHDJ01000151.1 Protein Homology CDS 65604 66389 . + 0 ID=cds-WP_000571480.1;Parent=gene-AD08_RS12265;Dbxref=Genbank:WP_000571480.1;Name=WP_000571480.1;gbkey=CDS;gene=znuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416373.1;locus_tag=AD08_RS12265;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571480.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 66536 67546 . - . ID=gene-AD08_RS12260;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AD08_RS12260;old_locus_tag=AD08_2116 NZ_JHDJ01000151.1 Protein Homology CDS 66536 67546 . - 0 ID=cds-WP_000568519.1;Parent=gene-AD08_RS12260;Dbxref=Genbank:WP_000568519.1;Name=WP_000568519.1;gbkey=CDS;gene=ruvB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441950.1;locus_tag=AD08_RS12260;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568519.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 67555 68166 . - . ID=gene-AD08_RS12255;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=AD08_RS12255;old_locus_tag=AD08_2117 NZ_JHDJ01000151.1 Protein Homology CDS 67555 68166 . - 0 ID=cds-WP_000580323.1;Parent=gene-AD08_RS12255;Dbxref=Genbank:WP_000580323.1;Name=WP_000580323.1;gbkey=CDS;gene=ruvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=AD08_RS12255;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580323.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 68305 68370 . - . ID=gene-AD08_RS30510;Name=AD08_RS30510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30510 NZ_JHDJ01000151.1 Protein Homology CDS 68305 68370 . - 0 ID=cds-WP_010723105.1;Parent=gene-AD08_RS30510;Dbxref=Genbank:WP_010723105.1;Name=WP_010723105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791244.1;locus_tag=AD08_RS30510;product=hypothetical protein;protein_id=WP_010723105.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 68441 69043 . + . ID=gene-AD08_RS12250;Name=AD08_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12250;old_locus_tag=AD08_2118 NZ_JHDJ01000151.1 Protein Homology CDS 68441 69043 . + 0 ID=cds-WP_001024932.1;Parent=gene-AD08_RS12250;Dbxref=Genbank:WP_001024932.1;Name=WP_001024932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416376.2;locus_tag=AD08_RS12250;product=YebB family permuted papain-like enzyme;protein_id=WP_001024932.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 69045 69566 . - . ID=gene-AD08_RS12245;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AD08_RS12245;old_locus_tag=AD08_2119 NZ_JHDJ01000151.1 Protein Homology CDS 69045 69566 . - 0 ID=cds-WP_001295503.1;Parent=gene-AD08_RS12245;Dbxref=Genbank:WP_001295503.1;Name=WP_001295503.1;gbkey=CDS;gene=ruvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=AD08_RS12245;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_001295503.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 69601 70341 . - . ID=gene-AD08_RS12240;Name=AD08_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12240;old_locus_tag=AD08_2120 NZ_JHDJ01000151.1 Protein Homology CDS 69601 70341 . - 0 ID=cds-WP_000907248.1;Parent=gene-AD08_RS12240;Dbxref=Genbank:WP_000907248.1;Name=WP_000907248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=AD08_RS12240;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907248.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 70370 70822 . - . ID=gene-AD08_RS12235;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=AD08_RS12235;old_locus_tag=AD08_2121 NZ_JHDJ01000151.1 Protein Homology CDS 70370 70822 . - 0 ID=cds-WP_001300367.1;Parent=gene-AD08_RS12235;Dbxref=Genbank:WP_001300367.1;Name=WP_001300367.1;gbkey=CDS;gene=nudB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416379.1;locus_tag=AD08_RS12235;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_001300367.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 70940 72712 . - . ID=gene-AD08_RS12230;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=AD08_RS12230;old_locus_tag=AD08_2122 NZ_JHDJ01000151.1 Protein Homology CDS 70940 72712 . - 0 ID=cds-WP_001258678.1;Parent=gene-AD08_RS12230;Dbxref=Genbank:WP_001258678.1;Name=WP_001258678.1;gbkey=CDS;gene=aspS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416380.1;locus_tag=AD08_RS12230;product=aspartate--tRNA ligase;protein_id=WP_001258678.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 73022 73588 . + . ID=gene-AD08_RS12225;Name=AD08_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12225;old_locus_tag=AD08_2123 NZ_JHDJ01000151.1 Protein Homology CDS 73022 73588 . + 0 ID=cds-WP_000891621.1;Parent=gene-AD08_RS12225;Dbxref=Genbank:WP_000891621.1;Name=WP_000891621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416381.2;locus_tag=AD08_RS12225;product=hydrolase;protein_id=WP_000891621.1;transl_table=11 NZ_JHDJ01000151.1 RefSeq gene 73943 74191 . + . ID=gene-AD08_RS12220;Name=AD08_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12220;old_locus_tag=AD08_2124 NZ_JHDJ01000151.1 Protein Homology CDS 73943 74191 . + 0 ID=cds-WP_016232182.1;Parent=gene-AD08_RS12220;Dbxref=Genbank:WP_016232182.1;Name=WP_016232182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238123.1;locus_tag=AD08_RS12220;product=DinI-like family protein;protein_id=WP_016232182.1;transl_table=11 ##sequence-region NZ_JHDJ01000152.1 1 40312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000152.1 RefSeq region 1 40312 . + . ID=NZ_JHDJ01000152.1:1..40312;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000152.1 RefSeq pseudogene 1 458 . + . ID=gene-AD08_RS0125970;Name=AD08_RS0125970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0125970;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000152.1 Protein Homology CDS 1 458 . + 2 ID=cds-AD08_RS0125970;Parent=gene-AD08_RS0125970;Note=internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS0125970;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000152.1 RefSeq pseudogene 500 2137 . - . ID=gene-AD08_RS12215;Name=AD08_RS12215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS12215;old_locus_tag=AD08_2128;partial=true;pseudo=true;start_range=.,500 NZ_JHDJ01000152.1 Protein Homology CDS 500 2137 . - 0 ID=cds-AD08_RS12215;Parent=gene-AD08_RS12215;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033300.1;locus_tag=AD08_RS12215;partial=true;product=tape measure protein;pseudo=true;start_range=.,500;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 2234 2437 . - . ID=gene-AD08_RS0125975;Name=AD08_RS0125975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125975 NZ_JHDJ01000152.1 Protein Homology CDS 2234 2437 . - 0 ID=cds-WP_032218783.1;Parent=gene-AD08_RS0125975;Dbxref=Genbank:WP_032218783.1;Name=WP_032218783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566446.1;locus_tag=AD08_RS0125975;product=hypothetical protein;protein_id=WP_032218783.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 2463 3173 . - . ID=gene-AD08_RS12210;Name=AD08_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12210;old_locus_tag=AD08_2129 NZ_JHDJ01000152.1 Protein Homology CDS 2463 3173 . - 0 ID=cds-WP_032218785.1;Parent=gene-AD08_RS12210;Dbxref=Genbank:WP_032218785.1;Name=WP_032218785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681134.1;locus_tag=AD08_RS12210;product=hypothetical protein;protein_id=WP_032218785.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 3728 4051 . - . ID=gene-AD08_RS12205;Name=AD08_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12205;old_locus_tag=AD08_2130 NZ_JHDJ01000152.1 Protein Homology CDS 3728 4051 . - 0 ID=cds-WP_032218801.1;Parent=gene-AD08_RS12205;Dbxref=Genbank:WP_032218801.1;Name=WP_032218801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001466220.1;locus_tag=AD08_RS12205;product=hypothetical protein;protein_id=WP_032218801.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 4190 4576 . - . ID=gene-AD08_RS12200;Name=AD08_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12200;old_locus_tag=AD08_2131 NZ_JHDJ01000152.1 Protein Homology CDS 4190 4576 . - 0 ID=cds-WP_000272011.1;Parent=gene-AD08_RS12200;Dbxref=Genbank:WP_000272011.1;Name=WP_000272011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272012.1;locus_tag=AD08_RS12200;product=hypothetical protein;protein_id=WP_000272011.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 4576 4848 . - . ID=gene-AD08_RS12195;Name=AD08_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12195;old_locus_tag=AD08_2132 NZ_JHDJ01000152.1 Protein Homology CDS 4576 4848 . - 0 ID=cds-WP_032218786.1;Parent=gene-AD08_RS12195;Dbxref=Genbank:WP_032218786.1;Name=WP_032218786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000816064.1;locus_tag=AD08_RS12195;product=HNH endonuclease;protein_id=WP_032218786.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 4851 5135 . - . ID=gene-AD08_RS12190;Name=AD08_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12190;old_locus_tag=AD08_2133 NZ_JHDJ01000152.1 Protein Homology CDS 4851 5135 . - 0 ID=cds-WP_032218788.1;Parent=gene-AD08_RS12190;Dbxref=Genbank:WP_032218788.1;Name=WP_032218788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239555.1;locus_tag=AD08_RS12190;product=hypothetical protein;protein_id=WP_032218788.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 5137 5688 . - . ID=gene-AD08_RS0125980;Name=AD08_RS0125980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125980 NZ_JHDJ01000152.1 Protein Homology CDS 5137 5688 . - 0 ID=cds-WP_032218790.1;Parent=gene-AD08_RS0125980;Dbxref=Genbank:WP_032218790.1;Name=WP_032218790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999794.1;locus_tag=AD08_RS0125980;product=hypothetical protein;protein_id=WP_032218790.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 5912 6100 . + . ID=gene-AD08_RS0125985;Name=AD08_RS0125985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125985 NZ_JHDJ01000152.1 Protein Homology CDS 5912 6100 . + 0 ID=cds-WP_000247740.1;Parent=gene-AD08_RS0125985;Dbxref=Genbank:WP_000247740.1;Name=WP_000247740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000247740.1;locus_tag=AD08_RS0125985;product=hypothetical protein;protein_id=WP_000247740.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 7519 8088 . + . ID=gene-AD08_RS0125995;Name=AD08_RS0125995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0125995 NZ_JHDJ01000152.1 Protein Homology CDS 7519 8088 . + 0 ID=cds-WP_032218792.1;Parent=gene-AD08_RS0125995;Dbxref=Genbank:WP_032218792.1;Name=WP_032218792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004743146.1;locus_tag=AD08_RS0125995;product=recombinase family protein;protein_id=WP_032218792.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 8556 8903 . + . ID=gene-AD08_RS12185;Name=AD08_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12185;old_locus_tag=AD08_2135 NZ_JHDJ01000152.1 Protein Homology CDS 8556 8903 . + 0 ID=cds-WP_000599617.1;Parent=gene-AD08_RS12185;Dbxref=Genbank:WP_000599617.1;Name=WP_000599617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005069111.1;locus_tag=AD08_RS12185;product=DUF72 domain-containing protein;protein_id=WP_000599617.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 8956 9351 . + . ID=gene-AD08_RS12180;Name=AD08_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12180;old_locus_tag=AD08_2136 NZ_JHDJ01000152.1 Protein Homology CDS 8956 9351 . + 0 ID=cds-WP_000252980.1;Parent=gene-AD08_RS12180;Dbxref=Genbank:WP_000252980.1;Name=WP_000252980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310606.2;locus_tag=AD08_RS12180;product=hypothetical protein;protein_id=WP_000252980.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 9392 10135 . + . ID=gene-AD08_RS12175;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=AD08_RS12175;old_locus_tag=AD08_2137 NZ_JHDJ01000152.1 Protein Homology CDS 9392 10135 . + 0 ID=cds-WP_000019590.1;Parent=gene-AD08_RS12175;Dbxref=Genbank:WP_000019590.1;Name=WP_000019590.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416384.1;locus_tag=AD08_RS12175;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019590.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 10132 11103 . + . ID=gene-AD08_RS12170;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=AD08_RS12170;old_locus_tag=AD08_2138 NZ_JHDJ01000152.1 Protein Homology CDS 10132 11103 . + 0 ID=cds-WP_000564725.1;Parent=gene-AD08_RS12170;Dbxref=Genbank:WP_000564725.1;Name=WP_000564725.1;gbkey=CDS;gene=cmoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416385.1;locus_tag=AD08_RS12170;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_000564725.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq pseudogene 11268 13720 . - . ID=gene-AD08_RS0126000;Name=AD08_RS0126000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0126000;pseudo=true NZ_JHDJ01000152.1 Protein Homology CDS 11268 13720 . - 0 ID=cds-AD08_RS0126000;Parent=gene-AD08_RS0126000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416386.4;locus_tag=AD08_RS0126000;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;pseudo=true;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 13745 14845 . - . ID=gene-AD08_RS12165;Name=AD08_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12165;old_locus_tag=AD08_2141 NZ_JHDJ01000152.1 Protein Homology CDS 13745 14845 . - 0 ID=cds-WP_001214290.1;Parent=gene-AD08_RS12165;Dbxref=Genbank:WP_001214290.1;Name=WP_001214290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416387.1;locus_tag=AD08_RS12165;product=cytochrome c;protein_id=WP_001214290.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 15233 15979 . - . ID=gene-AD08_RS12160;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=AD08_RS12160;old_locus_tag=AD08_2142 NZ_JHDJ01000152.1 Protein Homology CDS 15233 15979 . - 0 ID=cds-WP_001185741.1;Parent=gene-AD08_RS12160;Dbxref=Genbank:WP_001185741.1;Name=WP_001185741.1;gbkey=CDS;gene=cutC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025309.2;locus_tag=AD08_RS12160;product=copper homeostasis protein CutC;protein_id=WP_001185741.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 15993 16559 . - . ID=gene-AD08_RS12155;Name=AD08_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12155;old_locus_tag=AD08_2143 NZ_JHDJ01000152.1 Protein Homology CDS 15993 16559 . - 0 ID=cds-WP_001326725.1;Parent=gene-AD08_RS12155;Dbxref=Genbank:WP_001326725.1;Name=WP_001326725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416389.4;locus_tag=AD08_RS12155;product=VOC family protein;protein_id=WP_001326725.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 16775 18508 . + . ID=gene-AD08_RS12150;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=AD08_RS12150;old_locus_tag=AD08_2144 NZ_JHDJ01000152.1 Protein Homology CDS 16775 18508 . + 0 ID=cds-WP_001025322.1;Parent=gene-AD08_RS12150;Dbxref=Genbank:WP_001025322.1;Name=WP_001025322.1;gbkey=CDS;gene=argS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=AD08_RS12150;product=arginine--tRNA ligase;protein_id=WP_001025322.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 18685 19173 . + . ID=gene-AD08_RS12145;Name=AD08_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12145;old_locus_tag=AD08_2145 NZ_JHDJ01000152.1 Protein Homology CDS 18685 19173 . + 0 ID=cds-WP_001299676.1;Parent=gene-AD08_RS12145;Dbxref=Genbank:WP_001299676.1;Name=WP_001299676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416391.4;locus_tag=AD08_RS12145;product=lysozyme inhibitor LprI family protein;protein_id=WP_001299676.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 19293 19685 . - . ID=gene-AD08_RS12140;Name=AD08_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12140;old_locus_tag=AD08_2146 NZ_JHDJ01000152.1 Protein Homology CDS 19293 19685 . - 0 ID=cds-WP_001259583.1;Parent=gene-AD08_RS12140;Dbxref=Genbank:WP_001259583.1;Name=WP_001259583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416392.1;locus_tag=AD08_RS12140;product=flagellar protein FlhE;protein_id=WP_001259583.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 19685 21763 . - . ID=gene-AD08_RS12135;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AD08_RS12135;old_locus_tag=AD08_2147 NZ_JHDJ01000152.1 Protein Homology CDS 19685 21763 . - 0 ID=cds-WP_000066951.1;Parent=gene-AD08_RS12135;Dbxref=Genbank:WP_000066951.1;Name=WP_000066951.1;gbkey=CDS;gene=flhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416393.1;locus_tag=AD08_RS12135;product=flagellar biosynthesis protein FlhA;protein_id=WP_000066951.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 21756 22904 . - . ID=gene-AD08_RS12130;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=AD08_RS12130;old_locus_tag=AD08_2148 NZ_JHDJ01000152.1 Protein Homology CDS 21756 22904 . - 0 ID=cds-WP_001278954.1;Parent=gene-AD08_RS12130;Dbxref=Genbank:WP_001278954.1;Name=WP_001278954.1;gbkey=CDS;gene=flhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416394.1;locus_tag=AD08_RS12130;product=flagellar type III secretion system protein FlhB;protein_id=WP_001278954.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 23106 23750 . - . ID=gene-AD08_RS12125;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=AD08_RS12125;old_locus_tag=AD08_2150 NZ_JHDJ01000152.1 Protein Homology CDS 23106 23750 . - 0 ID=cds-WP_000983609.1;Parent=gene-AD08_RS12125;Dbxref=Genbank:WP_000983609.1;Name=WP_000983609.1;gbkey=CDS;gene=cheZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416395.1;locus_tag=AD08_RS12125;product=protein phosphatase CheZ;protein_id=WP_000983609.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 23761 24150 . - . ID=gene-AD08_RS12120;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=AD08_RS12120;old_locus_tag=AD08_2151 NZ_JHDJ01000152.1 Protein Homology CDS 23761 24150 . - 0 ID=cds-WP_000763867.1;Parent=gene-AD08_RS12120;Dbxref=Genbank:WP_000763867.1;Name=WP_000763867.1;gbkey=CDS;gene=cheY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127682.1;locus_tag=AD08_RS12120;product=chemotaxis protein CheY;protein_id=WP_000763867.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 24165 25214 . - . ID=gene-AD08_RS12115;Name=AD08_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12115;old_locus_tag=AD08_2152 NZ_JHDJ01000152.1 Protein Homology CDS 24165 25214 . - 0 ID=cds-WP_000036361.1;Parent=gene-AD08_RS12115;Dbxref=Genbank:WP_000036361.1;Name=WP_000036361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=AD08_RS12115;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036361.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 25217 26077 . - . ID=gene-AD08_RS12110;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=AD08_RS12110;old_locus_tag=AD08_2153 NZ_JHDJ01000152.1 Protein Homology CDS 25217 26077 . - 0 ID=cds-WP_000204337.1;Parent=gene-AD08_RS12110;Dbxref=Genbank:WP_000204337.1;Name=WP_000204337.1;gbkey=CDS;gene=cheR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416398.1;locus_tag=AD08_RS12110;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204337.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 26096 27697 . - . ID=gene-AD08_RS12105;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AD08_RS12105;old_locus_tag=AD08_2154 NZ_JHDJ01000152.1 Protein Homology CDS 26096 27697 . - 0 ID=cds-WP_000483221.1;Parent=gene-AD08_RS12105;Dbxref=Genbank:WP_000483221.1;Name=WP_000483221.1;gbkey=CDS;gene=tap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416399.1;locus_tag=AD08_RS12105;product=methyl-accepting chemotaxis protein IV;protein_id=WP_000483221.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 27743 29404 . - . ID=gene-AD08_RS12100;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=AD08_RS12100;old_locus_tag=AD08_2155 NZ_JHDJ01000152.1 Protein Homology CDS 27743 29404 . - 0 ID=cds-WP_001297437.1;Parent=gene-AD08_RS12100;Dbxref=Genbank:WP_001297437.1;Name=WP_001297437.1;gbkey=CDS;gene=tar;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127686.1;locus_tag=AD08_RS12100;product=methyl-accepting chemotaxis protein II;protein_id=WP_001297437.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 29549 30052 . - . ID=gene-AD08_RS12095;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=AD08_RS12095;old_locus_tag=AD08_2156 NZ_JHDJ01000152.1 Protein Homology CDS 29549 30052 . - 0 ID=cds-WP_000147302.1;Parent=gene-AD08_RS12095;Dbxref=Genbank:WP_000147302.1;Name=WP_000147302.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310624.1;locus_tag=AD08_RS12095;product=chemotaxis protein CheW;protein_id=WP_000147302.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 30073 32037 . - . ID=gene-AD08_RS12090;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=AD08_RS12090;old_locus_tag=AD08_2157 NZ_JHDJ01000152.1 Protein Homology CDS 30073 32037 . - 0 ID=cds-WP_021569392.1;Parent=gene-AD08_RS12090;Dbxref=Genbank:WP_021569392.1;Name=WP_021569392.1;gbkey=CDS;gene=cheA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416402.1;locus_tag=AD08_RS12090;product=chemotaxis protein CheA;protein_id=WP_021569392.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 32042 32968 . - . ID=gene-AD08_RS12085;Name=AD08_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12085;old_locus_tag=AD08_2158 NZ_JHDJ01000152.1 Protein Homology CDS 32042 32968 . - 0 ID=cds-WP_000795630.1;Parent=gene-AD08_RS12085;Dbxref=Genbank:WP_000795630.1;Name=WP_000795630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310626.1;locus_tag=AD08_RS12085;product=flagellar motor protein MotB;protein_id=WP_000795630.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 32965 33852 . - . ID=gene-AD08_RS12080;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=AD08_RS12080;old_locus_tag=AD08_2159 NZ_JHDJ01000152.1 Protein Homology CDS 32965 33852 . - 0 ID=cds-WP_000906340.1;Parent=gene-AD08_RS12080;Dbxref=Genbank:WP_000906340.1;Name=WP_000906340.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416404.1;locus_tag=AD08_RS12080;product=flagellar motor stator protein MotA;protein_id=WP_000906340.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 33979 34557 . - . ID=gene-AD08_RS12075;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=AD08_RS12075;old_locus_tag=AD08_2160 NZ_JHDJ01000152.1 Protein Homology CDS 33979 34557 . - 0 ID=cds-WP_001291603.1;Parent=gene-AD08_RS12075;Dbxref=Genbank:WP_001291603.1;Name=WP_001291603.1;gbkey=CDS;gene=flhC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310628.1;locus_tag=AD08_RS12075;product=flagellar transcriptional regulator FlhC;protein_id=WP_001291603.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 34560 34910 . - . ID=gene-AD08_RS12070;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=AD08_RS12070;old_locus_tag=AD08_2161 NZ_JHDJ01000152.1 Protein Homology CDS 34560 34910 . - 0 ID=cds-WP_001295647.1;Parent=gene-AD08_RS12070;Dbxref=Genbank:WP_001295647.1;Name=WP_001295647.1;gbkey=CDS;gene=flhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416406.4;locus_tag=AD08_RS12070;product=flagellar transcriptional regulator FlhD;protein_id=WP_001295647.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 35689 36117 . + . ID=gene-AD08_RS12065;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=AD08_RS12065;old_locus_tag=AD08_2163 NZ_JHDJ01000152.1 Protein Homology CDS 35689 36117 . + 0 ID=cds-WP_000122426.1;Parent=gene-AD08_RS12065;Dbxref=Genbank:WP_000122426.1;Name=WP_000122426.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416409.1;locus_tag=AD08_RS12065;product=universal stress protein UspC;protein_id=WP_000122426.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 36124 37548 . - . ID=gene-AD08_RS12060;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=AD08_RS12060;old_locus_tag=AD08_2164 NZ_JHDJ01000152.1 Protein Homology CDS 36124 37548 . - 0 ID=cds-WP_001295646.1;Parent=gene-AD08_RS12060;Dbxref=Genbank:WP_001295646.1;Name=WP_001295646.1;gbkey=CDS;gene=otsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416410.1;locus_tag=AD08_RS12060;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_001295646.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 37523 38323 . - . ID=gene-AD08_RS12055;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=AD08_RS12055;old_locus_tag=AD08_2165 NZ_JHDJ01000152.1 Protein Homology CDS 37523 38323 . - 0 ID=cds-WP_032218796.1;Parent=gene-AD08_RS12055;Dbxref=Genbank:WP_032218796.1;Name=WP_032218796.1;gbkey=CDS;gene=otsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310632.1;locus_tag=AD08_RS12055;product=trehalose-phosphatase;protein_id=WP_032218796.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq gene 38490 39479 . - . ID=gene-AD08_RS12050;Name=AD08_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12050;old_locus_tag=AD08_2166 NZ_JHDJ01000152.1 Protein Homology CDS 38490 39479 . - 0 ID=cds-WP_162720771.1;Parent=gene-AD08_RS12050;Dbxref=Genbank:WP_162720771.1;Name=WP_162720771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707790.1;locus_tag=AD08_RS12050;product=arabinose ABC transporter permease AraH;protein_id=WP_162720771.1;transl_table=11 NZ_JHDJ01000152.1 RefSeq pseudogene 39491 39874 . - . ID=gene-AD08_RS12045;Name=AD08_RS12045;end_range=39874,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS12045;old_locus_tag=AD08_2167;partial=true;pseudo=true NZ_JHDJ01000152.1 Protein Homology CDS 39491 39874 . - 0 ID=cds-AD08_RS12045;Parent=gene-AD08_RS12045;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=39874,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127704.1;locus_tag=AD08_RS12045;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_JHDJ01000152.1 RefSeq pseudogene 39928 40312 . + . ID=gene-AD08_RS12040;Name=AD08_RS12040;end_range=40312,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS12040;old_locus_tag=AD08_2168;partial=true;pseudo=true NZ_JHDJ01000152.1 Protein Homology CDS 39928 40312 . + 0 ID=cds-AD08_RS12040;Parent=gene-AD08_RS12040;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=40312,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS12040;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JHDJ01000152.1 cmsearch sequence_feature 40209 40312 . + . ID=id-AD08_RS12040;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;end_range=40312,.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS12040;partial=true ##sequence-region NZ_JHDJ01000153.1 1 21543 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000153.1 RefSeq region 1 21543 . + . ID=NZ_JHDJ01000153.1:1..21543;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000153.1 RefSeq gene 171 1283 . - . ID=gene-AD08_RS12035;Name=AD08_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12035;old_locus_tag=AD08_2169 NZ_JHDJ01000153.1 Protein Homology CDS 171 1283 . - 0 ID=cds-WP_001300563.1-8;Parent=gene-AD08_RS12035;Dbxref=Genbank:WP_001300563.1;Name=WP_001300563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS12035;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 1593 1733 . + . ID=gene-AD08_RS0126005;Name=AD08_RS0126005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126005 NZ_JHDJ01000153.1 Protein Homology CDS 1593 1733 . + 0 ID=cds-WP_001135720.1;Parent=gene-AD08_RS0126005;Dbxref=Genbank:WP_001135720.1;Name=WP_001135720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135715.1;locus_tag=AD08_RS0126005;product=Hok/Gef family protein;protein_id=WP_001135720.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 2093 2179 . - . ID=gene-AD08_RS12030;Name=AD08_RS12030;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS12030;old_locus_tag=AD08_2170 NZ_JHDJ01000153.1 tRNAscan-SE tRNA 2093 2179 . - . ID=rna-AD08_RS12030;Parent=gene-AD08_RS12030;anticodon=(pos:complement(2143..2145));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS12030;product=tRNA-Leu NZ_JHDJ01000153.1 tRNAscan-SE exon 2093 2179 . - . ID=exon-AD08_RS12030-1;Parent=rna-AD08_RS12030;anticodon=(pos:complement(2143..2145));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS12030;product=tRNA-Leu NZ_JHDJ01000153.1 RefSeq gene 2192 2265 . - . ID=gene-AD08_RS12025;Name=AD08_RS12025;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS12025;old_locus_tag=AD08_2171 NZ_JHDJ01000153.1 tRNAscan-SE tRNA 2192 2265 . - . ID=rna-AD08_RS12025;Parent=gene-AD08_RS12025;anticodon=(pos:complement(2231..2233));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS12025;product=tRNA-Cys NZ_JHDJ01000153.1 tRNAscan-SE exon 2192 2265 . - . ID=exon-AD08_RS12025-1;Parent=rna-AD08_RS12025;anticodon=(pos:complement(2231..2233));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS12025;product=tRNA-Cys NZ_JHDJ01000153.1 RefSeq gene 2320 2395 . - . ID=gene-AD08_RS12020;Name=AD08_RS12020;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS12020;old_locus_tag=AD08_2172 NZ_JHDJ01000153.1 tRNAscan-SE tRNA 2320 2395 . - . ID=rna-AD08_RS12020;Parent=gene-AD08_RS12020;anticodon=(pos:complement(2360..2362));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS12020;product=tRNA-Gly NZ_JHDJ01000153.1 tRNAscan-SE exon 2320 2395 . - . ID=exon-AD08_RS12020-1;Parent=rna-AD08_RS12020;anticodon=(pos:complement(2360..2362));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS12020;product=tRNA-Gly NZ_JHDJ01000153.1 RefSeq gene 2547 3095 . - . ID=gene-AD08_RS12015;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=AD08_RS12015;old_locus_tag=AD08_2173 NZ_JHDJ01000153.1 Protein Homology CDS 2547 3095 . - 0 ID=cds-WP_001160187.1;Parent=gene-AD08_RS12015;Dbxref=Genbank:WP_001160187.1;Name=WP_001160187.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310677.1;locus_tag=AD08_RS12015;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160187.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 3152 4984 . - . ID=gene-AD08_RS12010;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AD08_RS12010;old_locus_tag=AD08_2174 NZ_JHDJ01000153.1 Protein Homology CDS 3152 4984 . - 0 ID=cds-WP_001283421.1;Parent=gene-AD08_RS12010;Dbxref=Genbank:WP_001283421.1;Name=WP_001283421.1;gbkey=CDS;gene=uvrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310678.2;locus_tag=AD08_RS12010;product=excinuclease ABC subunit UvrC;protein_id=WP_001283421.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 4981 5637 . - . ID=gene-AD08_RS12005;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=AD08_RS12005;old_locus_tag=AD08_2175 NZ_JHDJ01000153.1 Protein Homology CDS 4981 5637 . - 0 ID=cds-WP_000611335.1;Parent=gene-AD08_RS12005;Dbxref=Genbank:WP_000611335.1;Name=WP_000611335.1;gbkey=CDS;gene=uvrY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416424.1;locus_tag=AD08_RS12005;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611335.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 5933 6109 . + . ID=gene-AD08_RS31710;Name=AD08_RS31710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31710 NZ_JHDJ01000153.1 Protein Homology CDS 5933 6109 . + 0 ID=cds-WP_000590347.1;Parent=gene-AD08_RS31710;Dbxref=Genbank:WP_000590347.1;Name=WP_000590347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518796.1;locus_tag=AD08_RS31710;product=hypothetical protein;protein_id=WP_000590347.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 6096 6320 . + . ID=gene-AD08_RS12000;Name=AD08_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS12000;old_locus_tag=AD08_2177 NZ_JHDJ01000153.1 Protein Homology CDS 6096 6320 . + 0 ID=cds-WP_000106474.1;Parent=gene-AD08_RS12000;Dbxref=Genbank:WP_000106474.1;Name=WP_000106474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416425.1;locus_tag=AD08_RS12000;product=DUF2594 family protein;protein_id=WP_000106474.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 6387 7109 . - . ID=gene-AD08_RS11995;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=AD08_RS11995;old_locus_tag=AD08_2178 NZ_JHDJ01000153.1 Protein Homology CDS 6387 7109 . - 0 ID=cds-WP_001154276.1;Parent=gene-AD08_RS11995;Dbxref=Genbank:WP_001154276.1;Name=WP_001154276.1;gbkey=CDS;gene=sdiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310681.1;locus_tag=AD08_RS11995;product=transcriptional regulator SdiA;protein_id=WP_001154276.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq pseudogene 7345 8094 . - . ID=gene-AD08_RS11990;Name=yecC;gbkey=Gene;gene=yecC;gene_biotype=pseudogene;locus_tag=AD08_RS11990;old_locus_tag=AD08_2179;partial=true;pseudo=true;start_range=.,7345 NZ_JHDJ01000153.1 Protein Homology CDS 7345 8094 . - 0 ID=cds-AD08_RS11990;Parent=gene-AD08_RS11990;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=yecC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416427.1;locus_tag=AD08_RS11990;partial=true;product=L-cystine ABC transporter ATP-binding protein YecC;pseudo=true;start_range=.,7345;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 8091 8759 . - . ID=gene-AD08_RS11985;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=AD08_RS11985;old_locus_tag=AD08_2180 NZ_JHDJ01000153.1 Protein Homology CDS 8091 8759 . - 0 ID=cds-WP_001158220.1;Parent=gene-AD08_RS11985;Dbxref=Genbank:WP_001158220.1;Name=WP_001158220.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416428.1;locus_tag=AD08_RS11985;product=cystine ABC transporter permease;protein_id=WP_001158220.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 8774 9760 . - . ID=gene-AD08_RS11980;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=AD08_RS11980;old_locus_tag=AD08_2181 NZ_JHDJ01000153.1 Protein Homology CDS 8774 9760 . - 0 ID=cds-WP_032218805.1;Parent=gene-AD08_RS11980;Dbxref=Genbank:WP_032218805.1;Name=WP_032218805.1;gbkey=CDS;gene=dcyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416429.4;locus_tag=AD08_RS11980;product=D-cysteine desulfhydrase;protein_id=WP_032218805.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 9865 10665 . - . ID=gene-AD08_RS11975;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=AD08_RS11975;old_locus_tag=AD08_2182 NZ_JHDJ01000153.1 Protein Homology CDS 9865 10665 . - 0 ID=cds-WP_032218807.1;Parent=gene-AD08_RS11975;Dbxref=Genbank:WP_032218807.1;Name=WP_032218807.1;gbkey=CDS;gene=tcyJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416430.1;locus_tag=AD08_RS11975;product=cystine ABC transporter substrate-binding protein;protein_id=WP_032218807.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 10753 11304 . - . ID=gene-AD08_RS11970;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=AD08_RS11970;old_locus_tag=AD08_2183 NZ_JHDJ01000153.1 Protein Homology CDS 10753 11304 . - 0 ID=cds-WP_001317902.1;Parent=gene-AD08_RS11970;Dbxref=Genbank:WP_001317902.1;Name=WP_001317902.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310687.2;locus_tag=AD08_RS11970;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_001317902.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 11350 12069 . - . ID=gene-AD08_RS11965;Name=AD08_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11965;old_locus_tag=AD08_2184 NZ_JHDJ01000153.1 Protein Homology CDS 11350 12069 . - 0 ID=cds-WP_001087467.1;Parent=gene-AD08_RS11965;Dbxref=Genbank:WP_001087467.1;Name=WP_001087467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310688.1;locus_tag=AD08_RS11965;product=RNA polymerase sigma factor FliA;protein_id=WP_001087467.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 12234 13808 . - . ID=gene-AD08_RS11960;Name=AD08_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11960;old_locus_tag=AD08_2185 NZ_JHDJ01000153.1 Protein Homology CDS 12234 13808 . - 0 ID=cds-WP_000079829.1;Parent=gene-AD08_RS11960;Dbxref=Genbank:WP_000079829.1;Name=WP_000079829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079739.1;locus_tag=AD08_RS11960;product=hypothetical protein;protein_id=WP_000079829.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 14063 15475 . + . ID=gene-AD08_RS11955;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=AD08_RS11955;old_locus_tag=AD08_2186 NZ_JHDJ01000153.1 Protein Homology CDS 14063 15475 . + 0 ID=cds-WP_000146099.1;Parent=gene-AD08_RS11955;Dbxref=Genbank:WP_000146099.1;Name=WP_000146099.1;gbkey=CDS;gene=fliD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785099.1;locus_tag=AD08_RS11955;product=flagellar filament capping protein FliD;protein_id=WP_000146099.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 15490 15900 . + . ID=gene-AD08_RS11950;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=AD08_RS11950;old_locus_tag=AD08_2187 NZ_JHDJ01000153.1 Protein Homology CDS 15490 15900 . + 0 ID=cds-WP_000287768.1;Parent=gene-AD08_RS11950;Dbxref=Genbank:WP_000287768.1;Name=WP_000287768.1;gbkey=CDS;gene=fliS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310691.1;locus_tag=AD08_RS11950;product=flagellar export chaperone FliS;protein_id=WP_000287768.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 15900 16265 . + . ID=gene-AD08_RS11945;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=AD08_RS11945;old_locus_tag=AD08_2188 NZ_JHDJ01000153.1 Protein Homology CDS 15900 16265 . + 0 ID=cds-WP_001388011.1;Parent=gene-AD08_RS11945;Dbxref=Genbank:WP_001388011.1;Name=WP_001388011.1;gbkey=CDS;gene=fliT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310692.1;locus_tag=AD08_RS11945;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_001388011.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 16343 17830 . + . ID=gene-AD08_RS11940;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=AD08_RS11940;old_locus_tag=AD08_2189 NZ_JHDJ01000153.1 Protein Homology CDS 16343 17830 . + 0 ID=cds-WP_001245699.1;Parent=gene-AD08_RS11940;Dbxref=Genbank:WP_001245699.1;Name=WP_001245699.1;gbkey=CDS;gene=amyA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416437.1;locus_tag=AD08_RS11940;product=alpha-amylase;protein_id=WP_001245699.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 17864 18277 . - . ID=gene-AD08_RS11935;Name=AD08_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11935;old_locus_tag=AD08_2190 NZ_JHDJ01000153.1 Protein Homology CDS 17864 18277 . - 0 ID=cds-WP_001295642.1;Parent=gene-AD08_RS11935;Dbxref=Genbank:WP_001295642.1;Name=WP_001295642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310694.3;locus_tag=AD08_RS11935;product=lipoprotein;protein_id=WP_001295642.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 18464 19669 . + . ID=gene-AD08_RS11930;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=AD08_RS11930;old_locus_tag=AD08_2191 NZ_JHDJ01000153.1 Protein Homology CDS 18464 19669 . + 0 ID=cds-WP_000118901.1;Parent=gene-AD08_RS11930;Dbxref=Genbank:WP_000118901.1;Name=WP_000118901.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416439.1;locus_tag=AD08_RS11930;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_000118901.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 19666 19899 . + . ID=gene-AD08_RS11925;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=AD08_RS11925;old_locus_tag=AD08_2192 NZ_JHDJ01000153.1 Protein Homology CDS 19666 19899 . + 0 ID=cds-WP_000789493.1;Parent=gene-AD08_RS11925;Dbxref=Genbank:WP_000789493.1;Name=WP_000789493.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=AD08_RS11925;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000789493.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 20008 20679 . + . ID=gene-AD08_RS11920;Name=AD08_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11920;old_locus_tag=AD08_2193 NZ_JHDJ01000153.1 Protein Homology CDS 20008 20679 . + 0 ID=cds-WP_000334585.1;Parent=gene-AD08_RS11920;Dbxref=Genbank:WP_000334585.1;Name=WP_000334585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245363.1;locus_tag=AD08_RS11920;product=SOS response-associated peptidase;protein_id=WP_000334585.1;transl_table=11 NZ_JHDJ01000153.1 RefSeq gene 20664 21543 . - . ID=gene-AD08_RS11915;Name=tnpB;end_range=21543,.;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AD08_RS11915;old_locus_tag=AD08_2194;partial=true NZ_JHDJ01000153.1 Protein Homology CDS 20664 21543 . - 1 ID=cds-WP_032218806.1;Parent=gene-AD08_RS11915;Dbxref=Genbank:WP_032218806.1;Name=WP_032218806.1;end_range=21543,.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006318378.1;locus_tag=AD08_RS11915;partial=true;product=IS200/IS605 family element transposase accessory protein TnpB;protein_id=WP_032218806.1;transl_table=11 ##sequence-region NZ_JHDJ01000154.1 1 37104 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000154.1 RefSeq region 1 37104 . + . ID=NZ_JHDJ01000154.1:1..37104;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000154.1 RefSeq gene 1 1098 . - . ID=gene-AD08_RS11910;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AD08_RS11910;old_locus_tag=AD08_2195;partial=true;start_range=.,1 NZ_JHDJ01000154.1 Protein Homology CDS 1 1098 . - 0 ID=cds-WP_032218818.1;Parent=gene-AD08_RS11910;Dbxref=Genbank:WP_032218818.1;Name=WP_032218818.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001458895.1;locus_tag=AD08_RS11910;partial=true;product=IS200/IS605 family element transposase accessory protein TnpB;protein_id=WP_032218818.1;start_range=.,1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 1168 1290 . + . ID=gene-AD08_RS28910;Name=AD08_RS28910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS28910 NZ_JHDJ01000154.1 Protein Homology CDS 1168 1290 . + 0 ID=cds-WP_001342382.1;Parent=gene-AD08_RS28910;Dbxref=Genbank:WP_001342382.1;Name=WP_001342382.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013921.1;locus_tag=AD08_RS28910;product=transposase;protein_id=WP_001342382.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 1291 1536 . + . ID=gene-AD08_RS31170;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AD08_RS31170 NZ_JHDJ01000154.1 Protein Homology CDS 1291 1536 . + 0 ID=cds-WP_032232437.1;Parent=gene-AD08_RS31170;Dbxref=Genbank:WP_032232437.1;Name=WP_032232437.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612282.1;locus_tag=AD08_RS31170;product=IS200/IS605 family transposase;protein_id=WP_032232437.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 2469 3266 . - . ID=gene-AD08_RS11905;Name=AD08_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11905;old_locus_tag=AD08_2198 NZ_JHDJ01000154.1 Protein Homology CDS 2469 3266 . - 0 ID=cds-WP_032197943.1;Parent=gene-AD08_RS11905;Dbxref=Genbank:WP_032197943.1;Name=WP_032197943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415078.1;locus_tag=AD08_RS11905;product=helix-turn-helix transcriptional regulator;protein_id=WP_032197943.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 3276 3827 . - . ID=gene-AD08_RS0126025;Name=ybcL;gbkey=Gene;gene=ybcL;gene_biotype=protein_coding;locus_tag=AD08_RS0126025 NZ_JHDJ01000154.1 Protein Homology CDS 3276 3827 . - 0 ID=cds-WP_000734031.1;Parent=gene-AD08_RS0126025;Dbxref=Genbank:WP_000734031.1;Name=WP_000734031.1;gbkey=CDS;gene=ybcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707821.1;locus_tag=AD08_RS0126025;product=Raf kinase inhibitor-like protein YbcL;protein_id=WP_000734031.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 3996 4328 . - . ID=gene-AD08_RS11900;Name=emrE;gbkey=Gene;gene=emrE;gene_biotype=protein_coding;locus_tag=AD08_RS11900;old_locus_tag=AD08_2199 NZ_JHDJ01000154.1 Protein Homology CDS 3996 4328 . - 0 ID=cds-WP_001070440.1;Parent=gene-AD08_RS11900;Dbxref=Genbank:WP_001070440.1;Name=WP_001070440.1;gbkey=CDS;gene=emrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707822.1;locus_tag=AD08_RS11900;product=SMR family multidrug efflux protein EmrE;protein_id=WP_001070440.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 4662 4976 . - . ID=gene-AD08_RS11895;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=AD08_RS11895;old_locus_tag=AD08_2200 NZ_JHDJ01000154.1 Protein Homology CDS 4662 4976 . - 0 ID=cds-WP_001274299.1;Parent=gene-AD08_RS11895;Dbxref=Genbank:WP_001274299.1;Name=WP_001274299.1;gbkey=CDS;gene=fliE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310703.1;locus_tag=AD08_RS11895;product=flagellar hook-basal body complex protein FliE;protein_id=WP_001274299.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 5191 6849 . + . ID=gene-AD08_RS11890;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=AD08_RS11890;old_locus_tag=AD08_2201 NZ_JHDJ01000154.1 Protein Homology CDS 5191 6849 . + 0 ID=cds-WP_000994427.1;Parent=gene-AD08_RS11890;Dbxref=Genbank:WP_000994427.1;Name=WP_000994427.1;gbkey=CDS;gene=fliF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416448.1;locus_tag=AD08_RS11890;product=flagellar basal body M-ring protein FliF;protein_id=WP_000994427.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 6842 7837 . + . ID=gene-AD08_RS11885;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=AD08_RS11885;old_locus_tag=AD08_2202 NZ_JHDJ01000154.1 Protein Homology CDS 6842 7837 . + 0 ID=cds-WP_024238893.1;Parent=gene-AD08_RS11885;Dbxref=Genbank:WP_024238893.1;Name=WP_024238893.1;gbkey=CDS;gene=fliG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310705.1;locus_tag=AD08_RS11885;product=flagellar motor switch protein FliG;protein_id=WP_024238893.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 7830 8516 . + . ID=gene-AD08_RS11880;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=AD08_RS11880;old_locus_tag=AD08_2203 NZ_JHDJ01000154.1 Protein Homology CDS 7830 8516 . + 0 ID=cds-WP_001282709.1;Parent=gene-AD08_RS11880;Dbxref=Genbank:WP_001282709.1;Name=WP_001282709.1;gbkey=CDS;gene=fliH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416450.2;locus_tag=AD08_RS11880;product=flagellar assembly protein FliH;protein_id=WP_001282709.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 8516 9889 . + . ID=gene-AD08_RS11875;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=AD08_RS11875;old_locus_tag=AD08_2204 NZ_JHDJ01000154.1 Protein Homology CDS 8516 9889 . + 0 ID=cds-WP_000213294.1;Parent=gene-AD08_RS11875;Dbxref=Genbank:WP_000213294.1;Name=WP_000213294.1;gbkey=CDS;gene=fliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416451.1;locus_tag=AD08_RS11875;product=flagellum-specific ATP synthase FliI;protein_id=WP_000213294.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 9908 10351 . + . ID=gene-AD08_RS11870;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=AD08_RS11870;old_locus_tag=AD08_2205 NZ_JHDJ01000154.1 Protein Homology CDS 9908 10351 . + 0 ID=cds-WP_000807584.1;Parent=gene-AD08_RS11870;Dbxref=Genbank:WP_000807584.1;Name=WP_000807584.1;gbkey=CDS;gene=fliJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310708.1;locus_tag=AD08_RS11870;product=flagella biosynthesis chaperone FliJ;protein_id=WP_000807584.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 10348 11475 . + . ID=gene-AD08_RS11865;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=AD08_RS11865;old_locus_tag=AD08_2206 NZ_JHDJ01000154.1 Protein Homology CDS 10348 11475 . + 0 ID=cds-WP_000620097.1;Parent=gene-AD08_RS11865;Dbxref=Genbank:WP_000620097.1;Name=WP_000620097.1;gbkey=CDS;gene=fliK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707828.1;locus_tag=AD08_RS11865;product=flagellar hook length control protein FliK;protein_id=WP_000620097.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 11580 12044 . + . ID=gene-AD08_RS11860;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=AD08_RS11860;old_locus_tag=AD08_2207 NZ_JHDJ01000154.1 Protein Homology CDS 11580 12044 . + 0 ID=cds-WP_000133106.1;Parent=gene-AD08_RS11860;Dbxref=Genbank:WP_000133106.1;Name=WP_000133106.1;gbkey=CDS;gene=fliL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310710.1;locus_tag=AD08_RS11860;product=flagellar basal body-associated protein FliL;protein_id=WP_000133106.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 12049 13053 . + . ID=gene-AD08_RS11855;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=AD08_RS11855;old_locus_tag=AD08_2208 NZ_JHDJ01000154.1 Protein Homology CDS 12049 13053 . + 0 ID=cds-WP_001295641.1;Parent=gene-AD08_RS11855;Dbxref=Genbank:WP_001295641.1;Name=WP_001295641.1;gbkey=CDS;gene=fliM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=AD08_RS11855;product=flagellar motor switch protein FliM;protein_id=WP_001295641.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 13050 13463 . + . ID=gene-AD08_RS11850;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=AD08_RS11850;old_locus_tag=AD08_2209 NZ_JHDJ01000154.1 Protein Homology CDS 13050 13463 . + 0 ID=cds-WP_001282098.1;Parent=gene-AD08_RS11850;Dbxref=Genbank:WP_001282098.1;Name=WP_001282098.1;gbkey=CDS;gene=fliN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310712.1;locus_tag=AD08_RS11850;product=flagellar motor switch protein FliN;protein_id=WP_001282098.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 13466 13831 . + . ID=gene-AD08_RS11845;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=AD08_RS11845;old_locus_tag=AD08_2211 NZ_JHDJ01000154.1 Protein Homology CDS 13466 13831 . + 0 ID=cds-WP_001302429.1;Parent=gene-AD08_RS11845;Dbxref=Genbank:WP_001302429.1;Name=WP_001302429.1;gbkey=CDS;gene=fliO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310713.2;locus_tag=AD08_RS11845;product=flagellar type III secretion system protein FliO;protein_id=WP_001302429.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 13831 14568 . + . ID=gene-AD08_RS11840;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=AD08_RS11840;old_locus_tag=AD08_2212 NZ_JHDJ01000154.1 Protein Homology CDS 13831 14568 . + 0 ID=cds-WP_001253450.1;Parent=gene-AD08_RS11840;Dbxref=Genbank:WP_001253450.1;Name=WP_001253450.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;gbkey=CDS;gene=fliP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310714.1;locus_tag=AD08_RS11840;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253450.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 14578 14847 . + . ID=gene-AD08_RS11835;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=AD08_RS11835;old_locus_tag=AD08_2213 NZ_JHDJ01000154.1 Protein Homology CDS 14578 14847 . + 0 ID=cds-WP_000187358.1;Parent=gene-AD08_RS11835;Dbxref=Genbank:WP_000187358.1;Name=WP_000187358.1;gbkey=CDS;gene=fliQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=AD08_RS11835;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187358.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 14855 15640 . + . ID=gene-AD08_RS11830;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=AD08_RS11830;old_locus_tag=AD08_2214 NZ_JHDJ01000154.1 Protein Homology CDS 14855 15640 . + 0 ID=cds-WP_000942314.1;Parent=gene-AD08_RS11830;Dbxref=Genbank:WP_000942314.1;Name=WP_000942314.1;gbkey=CDS;gene=fliR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310716.1;locus_tag=AD08_RS11830;product=flagellar type III secretion system protein FliR;protein_id=WP_000942314.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 15930 16553 . + . ID=gene-AD08_RS11825;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=AD08_RS11825;old_locus_tag=AD08_2215 NZ_JHDJ01000154.1 Protein Homology CDS 15930 16553 . + 0 ID=cds-WP_000103987.1;Parent=gene-AD08_RS11825;Dbxref=Genbank:WP_000103987.1;Name=WP_000103987.1;gbkey=CDS;gene=rcsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707836.1;locus_tag=AD08_RS11825;product=transcriptional regulator RcsA;protein_id=WP_000103987.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 16597 16839 . - . ID=gene-AD08_RS11820;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=AD08_RS11820;old_locus_tag=AD08_2216 NZ_JHDJ01000154.1 Protein Homology CDS 16597 16839 . - 0 ID=cds-WP_071524607.1;Parent=gene-AD08_RS11820;Dbxref=Genbank:WP_071524607.1;Name=WP_071524607.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310718.1;locus_tag=AD08_RS11820;product=protein DsrB;protein_id=WP_071524607.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 16948 17175 . + . ID=gene-AD08_RS11815;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=AD08_RS11815;old_locus_tag=AD08_2217 NZ_JHDJ01000154.1 Protein Homology CDS 16948 17175 . + 0 ID=cds-WP_000844800.1;Parent=gene-AD08_RS11815;Dbxref=Genbank:WP_000844800.1;Name=WP_000844800.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416463.4;locus_tag=AD08_RS11815;product=peroxide/acid resistance protein YodD;protein_id=WP_000844800.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 17473 18288 . + . ID=gene-AD08_RS11810;Name=AD08_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11810;old_locus_tag=AD08_2218 NZ_JHDJ01000154.1 Protein Homology CDS 17473 18288 . + 0 ID=cds-WP_032197947.1;Parent=gene-AD08_RS11810;Dbxref=Genbank:WP_032197947.1;Name=WP_032197947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310720.1;locus_tag=AD08_RS11810;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_032197947.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 18285 19979 . - . ID=gene-AD08_RS11805;Name=yedQ;gbkey=Gene;gene=yedQ;gene_biotype=protein_coding;locus_tag=AD08_RS11805;old_locus_tag=AD08_2219 NZ_JHDJ01000154.1 Protein Homology CDS 18285 19979 . - 0 ID=cds-WP_077699023.1;Parent=gene-AD08_RS11805;Dbxref=Genbank:WP_077699023.1;Name=WP_077699023.1;gbkey=CDS;gene=yedQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416465.2;locus_tag=AD08_RS11805;product=cellulose biosynthesis regulator YedQ;protein_id=WP_077699023.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 20217 20399 . - . ID=gene-AD08_RS11800;Name=AD08_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11800;old_locus_tag=AD08_2220 NZ_JHDJ01000154.1 Protein Homology CDS 20217 20399 . - 0 ID=cds-WP_000009306.1;Parent=gene-AD08_RS11800;Dbxref=Genbank:WP_000009306.1;Name=WP_000009306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310722.1;locus_tag=AD08_RS11800;product=DUF2158 domain-containing protein;protein_id=WP_000009306.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 20478 21395 . - . ID=gene-AD08_RS11795;Name=AD08_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11795;old_locus_tag=AD08_2221 NZ_JHDJ01000154.1 Protein Homology CDS 20478 21395 . - 0 ID=cds-WP_000922683.1;Parent=gene-AD08_RS11795;Dbxref=Genbank:WP_000922683.1;Name=WP_000922683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=AD08_RS11795;product=DUF808 domain-containing protein;protein_id=WP_000922683.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 21568 22488 . + . ID=gene-AD08_RS11790;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=AD08_RS11790;old_locus_tag=AD08_2222 NZ_JHDJ01000154.1 Protein Homology CDS 21568 22488 . + 0 ID=cds-WP_001212223.1;Parent=gene-AD08_RS11790;Dbxref=Genbank:WP_001212223.1;Name=WP_001212223.1;gbkey=CDS;gene=yedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310724.1;locus_tag=AD08_RS11790;product=drug/metabolite exporter YedA;protein_id=WP_001212223.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 22477 22947 . - . ID=gene-AD08_RS11785;Name=AD08_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11785;old_locus_tag=AD08_2223 NZ_JHDJ01000154.1 Protein Homology CDS 22477 22947 . - 0 ID=cds-WP_000785995.1;Parent=gene-AD08_RS11785;Dbxref=Genbank:WP_000785995.1;Name=WP_000785995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416469.1;locus_tag=AD08_RS11785;product=VSPR family DNA mismatch endonuclease;protein_id=WP_000785995.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 22928 24346 . - . ID=gene-AD08_RS11780;Name=AD08_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11780;old_locus_tag=AD08_2224 NZ_JHDJ01000154.1 Protein Homology CDS 22928 24346 . - 0 ID=cds-WP_001548695.1;Parent=gene-AD08_RS11780;Dbxref=Genbank:WP_001548695.1;Name=WP_001548695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310726.1;locus_tag=AD08_RS11780;product=DNA-cytosine methyltransferase;protein_id=WP_001548695.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 24413 25108 . - . ID=gene-AD08_RS11775;Name=AD08_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11775;old_locus_tag=AD08_2225 NZ_JHDJ01000154.1 Protein Homology CDS 24413 25108 . - 0 ID=cds-WP_032218813.1;Parent=gene-AD08_RS11775;Dbxref=Genbank:WP_032218813.1;Name=WP_032218813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416471.1;locus_tag=AD08_RS11775;product=phosphohydrolase;protein_id=WP_032218813.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 25148 25513 . - . ID=gene-AD08_RS11770;Name=AD08_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11770;old_locus_tag=AD08_2226 NZ_JHDJ01000154.1 Protein Homology CDS 25148 25513 . - 0 ID=cds-WP_001313057.1;Parent=gene-AD08_RS11770;Dbxref=Genbank:WP_001313057.1;Name=WP_001313057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416472.2;locus_tag=AD08_RS11770;product=hypothetical protein;protein_id=WP_001313057.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 26080 27153 . + . ID=gene-AD08_RS11765;Name=AD08_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11765;old_locus_tag=AD08_2228 NZ_JHDJ01000154.1 Protein Homology CDS 26080 27153 . + 0 ID=cds-WP_032218814.1;Parent=gene-AD08_RS11765;Dbxref=Genbank:WP_032218814.1;Name=WP_032218814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824385.1;locus_tag=AD08_RS11765;product=membrane protein;protein_id=WP_032218814.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 27746 28597 . + . ID=gene-AD08_RS11760;Name=hchA;gbkey=Gene;gene=hchA;gene_biotype=protein_coding;locus_tag=AD08_RS11760;old_locus_tag=AD08_2229 NZ_JHDJ01000154.1 Protein Homology CDS 27746 28597 . + 0 ID=cds-WP_000218214.1;Parent=gene-AD08_RS11760;Dbxref=Genbank:WP_000218214.1;Name=WP_000218214.1;gbkey=CDS;gene=hchA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416476.1;locus_tag=AD08_RS11760;product=protein deglycase HchA;protein_id=WP_000218214.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 28705 30063 . - . ID=gene-AD08_RS11755;Name=AD08_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11755;old_locus_tag=AD08_2230 NZ_JHDJ01000154.1 Protein Homology CDS 28705 30063 . - 0 ID=cds-WP_032218815.1;Parent=gene-AD08_RS11755;Dbxref=Genbank:WP_032218815.1;Name=WP_032218815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416477.1;locus_tag=AD08_RS11755;product=two-component system sensor histidine kinase HprS;protein_id=WP_032218815.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 30063 30734 . - . ID=gene-AD08_RS11750;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=AD08_RS11750;old_locus_tag=AD08_2231 NZ_JHDJ01000154.1 Protein Homology CDS 30063 30734 . - 0 ID=cds-WP_001339045.1;Parent=gene-AD08_RS11750;Dbxref=Genbank:WP_001339045.1;Name=WP_001339045.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707854.2;locus_tag=AD08_RS11750;product=response regulator transcription factor HprR;protein_id=WP_001339045.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 30867 31280 . + . ID=gene-AD08_RS11745;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=AD08_RS11745;old_locus_tag=AD08_2232 NZ_JHDJ01000154.1 Protein Homology CDS 30867 31280 . + 0 ID=cds-WP_000920132.1;Parent=gene-AD08_RS11745;Dbxref=Genbank:WP_000920132.1;Name=WP_000920132.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310735.1;locus_tag=AD08_RS11745;product=hydroxyisourate hydrolase;protein_id=WP_000920132.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 31389 32393 . + . ID=gene-AD08_RS11740;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=AD08_RS11740;old_locus_tag=AD08_2233 NZ_JHDJ01000154.1 Protein Homology CDS 31389 32393 . + 0 ID=cds-WP_001617013.1;Parent=gene-AD08_RS11740;Dbxref=Genbank:WP_001617013.1;Name=WP_001617013.1;gbkey=CDS;gene=msrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310736.1;locus_tag=AD08_RS11740;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_001617013.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 32394 33029 . + . ID=gene-AD08_RS11735;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=AD08_RS11735;old_locus_tag=AD08_2234 NZ_JHDJ01000154.1 Protein Homology CDS 32394 33029 . + 0 ID=cds-WP_001241499.1;Parent=gene-AD08_RS11735;Dbxref=Genbank:WP_001241499.1;Name=WP_001241499.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416481.1;locus_tag=AD08_RS11735;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001241499.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 33286 33936 . + . ID=gene-AD08_RS11730;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=AD08_RS11730;old_locus_tag=AD08_2235 NZ_JHDJ01000154.1 Protein Homology CDS 33286 33936 . + 0 ID=cds-WP_032218817.1;Parent=gene-AD08_RS11730;Dbxref=Genbank:WP_032218817.1;Name=WP_032218817.1;gbkey=CDS;gene=zinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416482.1;locus_tag=AD08_RS11730;product=metal-binding protein ZinT;protein_id=WP_032218817.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 34279 34809 . + . ID=gene-AD08_RS11725;Name=AD08_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11725;old_locus_tag=AD08_2236 NZ_JHDJ01000154.1 Protein Homology CDS 34279 34809 . + 0 ID=cds-WP_001079074.1;Parent=gene-AD08_RS11725;Dbxref=Genbank:WP_001079074.1;Name=WP_001079074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416483.4;locus_tag=AD08_RS11725;product=cytochrome b;protein_id=WP_001079074.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 35379 35468 . - . ID=gene-AD08_RS11720;Name=AD08_RS11720;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS11720;old_locus_tag=AD08_2237 NZ_JHDJ01000154.1 tRNAscan-SE tRNA 35379 35468 . - . ID=rna-AD08_RS11720;Parent=gene-AD08_RS11720;anticodon=(pos:complement(35432..35434));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS11720;product=tRNA-Ser NZ_JHDJ01000154.1 tRNAscan-SE exon 35379 35468 . - . ID=exon-AD08_RS11720-1;Parent=rna-AD08_RS11720;anticodon=(pos:complement(35432..35434));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS11720;product=tRNA-Ser NZ_JHDJ01000154.1 RefSeq gene 35562 36359 . + . ID=gene-AD08_RS11715;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=AD08_RS11715;old_locus_tag=AD08_2238 NZ_JHDJ01000154.1 Protein Homology CDS 35562 36359 . + 0 ID=cds-WP_001300307.1;Parent=gene-AD08_RS11715;Dbxref=Genbank:WP_001300307.1;Name=WP_001300307.1;gbkey=CDS;gene=mtfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310801.2;locus_tag=AD08_RS11715;product=DgsA anti-repressor MtfA;protein_id=WP_001300307.1;transl_table=11 NZ_JHDJ01000154.1 RefSeq gene 36460 36535 . + . ID=gene-AD08_RS11710;Name=AD08_RS11710;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS11710;old_locus_tag=AD08_2239 NZ_JHDJ01000154.1 tRNAscan-SE tRNA 36460 36535 . + . ID=rna-AD08_RS11710;Parent=gene-AD08_RS11710;anticodon=(pos:36493..36495);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS11710;product=tRNA-Asn NZ_JHDJ01000154.1 tRNAscan-SE exon 36460 36535 . + . ID=exon-AD08_RS11710-1;Parent=rna-AD08_RS11710;anticodon=(pos:36493..36495);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS11710;product=tRNA-Asn NZ_JHDJ01000154.1 RefSeq pseudogene 36686 37104 . + . ID=gene-AD08_RS0126050;Name=AD08_RS0126050;end_range=37104,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0126050;partial=true;pseudo=true NZ_JHDJ01000154.1 Protein Homology CDS 36686 37104 . + 0 ID=cds-AD08_RS0126050;Parent=gene-AD08_RS0126050;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=37104,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS0126050;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000155.1 1 50662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000155.1 RefSeq region 1 50662 . + . ID=NZ_JHDJ01000155.1:1..50662;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000155.1 RefSeq pseudogene 4 327 . - . ID=gene-AD08_RS11705;Name=AD08_RS11705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS11705;old_locus_tag=AD08_2241;partial=true;pseudo=true;start_range=.,4 NZ_JHDJ01000155.1 Protein Homology CDS 4 327 . - 0 ID=cds-AD08_RS11705;Parent=gene-AD08_RS11705;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS11705;partial=true;product=transposase;pseudo=true;start_range=.,4;transl_table=11 NZ_JHDJ01000155.1 RefSeq pseudogene 381 1262 . + . ID=gene-AD08_RS11700;Name=AD08_RS11700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS11700;old_locus_tag=AD08_2242;partial=true;pseudo=true;start_range=.,381 NZ_JHDJ01000155.1 Protein Homology CDS 381 1262 . + 0 ID=cds-AD08_RS11700;Parent=gene-AD08_RS11700;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311870.1;locus_tag=AD08_RS11700;partial=true;product=site-specific integrase;pseudo=true;start_range=.,381;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 1714 5229 . + . ID=gene-AD08_RS11695;Name=AD08_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11695;old_locus_tag=AD08_2243 NZ_JHDJ01000155.1 Protein Homology CDS 1714 5229 . + 0 ID=cds-WP_032218820.1;Parent=gene-AD08_RS11695;Dbxref=Genbank:WP_032218820.1;Name=WP_032218820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708739.1;locus_tag=AD08_RS11695;product=ATP-binding protein;protein_id=WP_032218820.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq pseudogene 5371 5541 . + . ID=gene-AD08_RS0126055;Name=AD08_RS0126055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0126055;partial=true;pseudo=true;start_range=.,5371 NZ_JHDJ01000155.1 Protein Homology CDS 5371 5541 . + 0 ID=cds-AD08_RS0126055;Parent=gene-AD08_RS0126055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AD08_RS0126055;partial=true;product=transposase;pseudo=true;start_range=.,5371;transl_table=11 NZ_JHDJ01000155.1 RefSeq pseudogene 5587 5934 . + . ID=gene-AD08_RS28950;Name=AD08_RS28950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS28950;partial=true;pseudo=true;start_range=.,5587 NZ_JHDJ01000155.1 Protein Homology CDS 5587 5934 . + 0 ID=cds-AD08_RS28950;Parent=gene-AD08_RS28950;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000555401.1;locus_tag=AD08_RS28950;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,5587;transl_table=11 NZ_JHDJ01000155.1 RefSeq pseudogene 5973 6350 . - . ID=gene-AD08_RS0126060;Name=AD08_RS0126060;end_range=6350,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0126060;partial=true;pseudo=true;start_range=.,5973 NZ_JHDJ01000155.1 Protein Homology CDS 5973 6350 . - 0 ID=cds-AD08_RS0126060;Parent=gene-AD08_RS0126060;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=6350,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902302.1;locus_tag=AD08_RS0126060;partial=true;product=transposase;pseudo=true;start_range=.,5973;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 6302 7339 . + . ID=gene-AD08_RS11690;Name=AD08_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11690;old_locus_tag=AD08_2245 NZ_JHDJ01000155.1 Protein Homology CDS 6302 7339 . + 0 ID=cds-WP_071821664.1;Parent=gene-AD08_RS11690;Dbxref=Genbank:WP_071821664.1;Name=WP_071821664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001363149.1;locus_tag=AD08_RS11690;product=conjugal transfer protein TraF;protein_id=WP_071821664.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 7700 11557 . + . ID=gene-AD08_RS11685;Name=sigA;gbkey=Gene;gene=sigA;gene_biotype=protein_coding;locus_tag=AD08_RS11685;old_locus_tag=AD08_2246 NZ_JHDJ01000155.1 Protein Homology CDS 7700 11557 . + 0 ID=cds-WP_032218822.1;Parent=gene-AD08_RS11685;Dbxref=Genbank:WP_032218822.1;Name=WP_032218822.1;gbkey=CDS;gene=sigA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708742.1;locus_tag=AD08_RS11685;product=serine protease autotransporter toxin SigA;protein_id=WP_032218822.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 11604 12185 . + . ID=gene-AD08_RS0126070;Name=AD08_RS0126070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126070 NZ_JHDJ01000155.1 Protein Homology CDS 11604 12185 . + 0 ID=cds-WP_000291751.1;Parent=gene-AD08_RS0126070;Dbxref=Genbank:WP_000291751.1;Name=WP_000291751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000291745.1;locus_tag=AD08_RS0126070;product=hypothetical protein;protein_id=WP_000291751.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq pseudogene 12588 13538 . - . ID=gene-AD08_RS28965;Name=AD08_RS28965;end_range=13538,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS28965;old_locus_tag=AD08_2248;partial=true;pseudo=true NZ_JHDJ01000155.1 Protein Homology CDS 12588 13538 . - 0 ID=cds-AD08_RS28965;Parent=gene-AD08_RS28965;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=13538,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AD08_RS28965;partial=true;product=IS66 family transposase;pseudo=true;transl_table=11 NZ_JHDJ01000155.1 RefSeq pseudogene 13589 14164 . - . ID=gene-AD08_RS0126085;Name=AD08_RS0126085;end_range=14164,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0126085;partial=true;pseudo=true NZ_JHDJ01000155.1 Protein Homology CDS 13589 14164 . - 0 ID=cds-AD08_RS0126085;Parent=gene-AD08_RS0126085;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=14164,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1;locus_tag=AD08_RS0126085;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JHDJ01000155.1 RefSeq pseudogene 14168 14568 . + . ID=gene-AD08_RS11680;Name=AD08_RS11680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS11680;old_locus_tag=AD08_2250;partial=true;pseudo=true;start_range=.,14168 NZ_JHDJ01000155.1 Protein Homology CDS 14168 14568 . + 0 ID=cds-AD08_RS11680;Parent=gene-AD08_RS11680;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AD08_RS11680;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,14168;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 14796 15221 . + . ID=gene-AD08_RS11675;Name=AD08_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11675;old_locus_tag=AD08_2251 NZ_JHDJ01000155.1 Protein Homology CDS 14796 15221 . + 0 ID=cds-WP_000422749.1;Parent=gene-AD08_RS11675;Dbxref=Genbank:WP_000422749.1;Name=WP_000422749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AD08_RS11675;product=IS66 family insertion sequence hypothetical protein;protein_id=WP_000422749.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 15218 15568 . + . ID=gene-AD08_RS11670;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AD08_RS11670;old_locus_tag=AD08_2252 NZ_JHDJ01000155.1 Protein Homology CDS 15218 15568 . + 0 ID=cds-WP_000624723.1;Parent=gene-AD08_RS11670;Dbxref=Genbank:WP_000624723.1;Name=WP_000624723.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AD08_RS11670;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624723.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 15599 17212 . + . ID=gene-AD08_RS11665;Name=AD08_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11665;old_locus_tag=AD08_2253 NZ_JHDJ01000155.1 Protein Homology CDS 15599 17212 . + 0 ID=cds-WP_032221816.1;Parent=gene-AD08_RS11665;Dbxref=Genbank:WP_032221816.1;Name=WP_032221816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AD08_RS11665;product=IS66 family transposase;protein_id=WP_032221816.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq pseudogene 17440 17599 . + . ID=gene-AD08_RS31185;Name=AD08_RS31185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31185;partial=true;pseudo=true;start_range=.,17440 NZ_JHDJ01000155.1 Protein Homology CDS 17440 17599 . + 0 ID=cds-AD08_RS31185;Parent=gene-AD08_RS31185;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066419.1;locus_tag=AD08_RS31185;partial=true;product=transposase domain-containing protein;pseudo=true;start_range=.,17440;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 17817 19907 . - . ID=gene-AD08_RS11655;Name=iha;gbkey=Gene;gene=iha;gene_biotype=protein_coding;locus_tag=AD08_RS11655;old_locus_tag=AD08_2255 NZ_JHDJ01000155.1 Protein Homology CDS 17817 19907 . - 0 ID=cds-WP_032218823.1;Parent=gene-AD08_RS11655;Dbxref=Genbank:WP_032218823.1;Name=WP_032218823.1;gbkey=CDS;gene=iha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309387.1;locus_tag=AD08_RS11655;product=bifunctional siderophore receptor/adhesin Iha;protein_id=WP_032218823.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq pseudogene 21360 21776 . + . ID=gene-AD08_RS31190;Name=AD08_RS31190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31190;old_locus_tag=AD08_2256;pseudo=true NZ_JHDJ01000155.1 Protein Homology CDS 21360 21776 . + 0 ID=cds-AD08_RS31190;Parent=gene-AD08_RS31190;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000477613.1;locus_tag=AD08_RS31190;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDJ01000155.1 RefSeq pseudogene 22267 22603 . + . ID=gene-AD08_RS31715;Name=AD08_RS31715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31715;pseudo=true NZ_JHDJ01000155.1 Protein Homology CDS 22267 22603 . + 0 ID=cds-AD08_RS31715;Parent=gene-AD08_RS31715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502602.1;locus_tag=AD08_RS31715;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 23378 25573 . - . ID=gene-AD08_RS11650;Name=iutA;gbkey=Gene;gene=iutA;gene_biotype=protein_coding;locus_tag=AD08_RS11650;old_locus_tag=AD08_2257 NZ_JHDJ01000155.1 Protein Homology CDS 23378 25573 . - 0 ID=cds-WP_001387241.1;Parent=gene-AD08_RS11650;Dbxref=Genbank:WP_001387241.1;Name=WP_001387241.1;gbkey=CDS;gene=iutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709458.2;locus_tag=AD08_RS11650;product=ferric aerobactin receptor IutA;protein_id=WP_001387241.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 25579 26916 . - . ID=gene-AD08_RS11645;Name=iucD;gbkey=Gene;gene=iucD;gene_biotype=protein_coding;locus_tag=AD08_RS11645;old_locus_tag=AD08_2258 NZ_JHDJ01000155.1 Protein Homology CDS 25579 26916 . - 0 ID=cds-WP_000750131.1;Parent=gene-AD08_RS11645;Dbxref=Genbank:WP_000750131.1;Name=WP_000750131.1;gbkey=CDS;gene=iucD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709457.1;locus_tag=AD08_RS11645;product=NADPH-dependent L-lysine N(6)-monooxygenase;protein_id=WP_000750131.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 26913 28655 . - . ID=gene-AD08_RS11640;Name=iucC;gbkey=Gene;gene=iucC;gene_biotype=protein_coding;locus_tag=AD08_RS11640;old_locus_tag=AD08_2259 NZ_JHDJ01000155.1 Protein Homology CDS 26913 28655 . - 0 ID=cds-WP_032218825.1;Parent=gene-AD08_RS11640;Dbxref=Genbank:WP_032218825.1;Name=WP_032218825.1;gbkey=CDS;gene=iucC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709456.1;locus_tag=AD08_RS11640;product=aerobactin synthase IucC;protein_id=WP_032218825.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 28655 29602 . - . ID=gene-AD08_RS11635;Name=iucB;gbkey=Gene;gene=iucB;gene_biotype=protein_coding;locus_tag=AD08_RS11635;old_locus_tag=AD08_2260 NZ_JHDJ01000155.1 Protein Homology CDS 28655 29602 . - 0 ID=cds-WP_001287503.1;Parent=gene-AD08_RS11635;Dbxref=Genbank:WP_001287503.1;Name=WP_001287503.1;gbkey=CDS;gene=iucB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709455.1;locus_tag=AD08_RS11635;product=N(6)-hydroxylysine O-acetyltransferase;protein_id=WP_001287503.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 29603 31327 . - . ID=gene-AD08_RS11630;Name=iucA;gbkey=Gene;gene=iucA;gene_biotype=protein_coding;locus_tag=AD08_RS11630;old_locus_tag=AD08_2261 NZ_JHDJ01000155.1 Protein Homology CDS 29603 31327 . - 0 ID=cds-WP_001403387.1;Parent=gene-AD08_RS11630;Dbxref=Genbank:WP_001403387.1;Name=WP_001403387.1;gbkey=CDS;gene=iucA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001314127.1;locus_tag=AD08_RS11630;product=aerobactin synthase IucA;protein_id=WP_001403387.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 31463 32656 . + . ID=gene-AD08_RS11625;Name=AD08_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11625;old_locus_tag=AD08_2262 NZ_JHDJ01000155.1 Protein Homology CDS 31463 32656 . + 0 ID=cds-WP_000074477.1;Parent=gene-AD08_RS11625;Dbxref=Genbank:WP_000074477.1;Name=WP_000074477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709453.1;locus_tag=AD08_RS11625;product=MFS transporter;protein_id=WP_000074477.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 32814 33800 . - . ID=gene-AD08_RS11620;Name=AD08_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11620;old_locus_tag=AD08_2263 NZ_JHDJ01000155.1 Protein Homology CDS 32814 33800 . - 0 ID=cds-WP_000274668.1;Parent=gene-AD08_RS11620;Dbxref=Genbank:WP_000274668.1;Name=WP_000274668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000274668.1;locus_tag=AD08_RS11620;product=hypothetical protein;protein_id=WP_000274668.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 33900 34634 . + . ID=gene-AD08_RS11615;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=AD08_RS11615;old_locus_tag=AD08_2264 NZ_JHDJ01000155.1 Protein Homology CDS 33900 34634 . + 0 ID=cds-WP_001282578.1;Parent=gene-AD08_RS11615;Dbxref=Genbank:WP_001282578.1;Name=WP_001282578.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282578.1;locus_tag=AD08_RS11615;product=transcriptional regulator NanR;protein_id=WP_001282578.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 34670 35593 . - . ID=gene-AD08_RS11610;Name=AD08_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11610;old_locus_tag=AD08_2265 NZ_JHDJ01000155.1 Protein Homology CDS 34670 35593 . - 0 ID=cds-WP_032218827.1;Parent=gene-AD08_RS11610;Dbxref=Genbank:WP_032218827.1;Name=WP_032218827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001030790.1;locus_tag=AD08_RS11610;product=alpha/beta hydrolase;protein_id=WP_032218827.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 35655 36764 . - . ID=gene-AD08_RS11605;Name=AD08_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11605;old_locus_tag=AD08_2266 NZ_JHDJ01000155.1 Protein Homology CDS 35655 36764 . - 0 ID=cds-WP_000865295.1;Parent=gene-AD08_RS11605;Dbxref=Genbank:WP_000865295.1;Name=WP_000865295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562716.1;locus_tag=AD08_RS11605;product=N-acetylneuraminate epimerase;protein_id=WP_000865295.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 36777 37487 . - . ID=gene-AD08_RS11600;Name=AD08_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11600;old_locus_tag=AD08_2267 NZ_JHDJ01000155.1 Protein Homology CDS 36777 37487 . - 0 ID=cds-WP_001296386.1;Parent=gene-AD08_RS11600;Dbxref=Genbank:WP_001296386.1;Name=WP_001296386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002431274.1;locus_tag=AD08_RS11600;product=N-acetylneuraminic acid channel protein;protein_id=WP_001296386.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 37533 38342 . - . ID=gene-AD08_RS11595;Name=AD08_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11595;old_locus_tag=AD08_2268 NZ_JHDJ01000155.1 Protein Homology CDS 37533 38342 . - 0 ID=cds-WP_001513416.1;Parent=gene-AD08_RS11595;Dbxref=Genbank:WP_001513416.1;Name=WP_001513416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001513416.1;locus_tag=AD08_RS11595;product=alpha/beta hydrolase;protein_id=WP_001513416.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 38366 39838 . - . ID=gene-AD08_RS11590;Name=AD08_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11590;old_locus_tag=AD08_2269 NZ_JHDJ01000155.1 Protein Homology CDS 38366 39838 . - 0 ID=cds-WP_000376547.1;Parent=gene-AD08_RS11590;Dbxref=Genbank:WP_000376547.1;Name=WP_000376547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376547.1;locus_tag=AD08_RS11590;product=MFS transporter;protein_id=WP_000376547.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 39887 40762 . - . ID=gene-AD08_RS11585;Name=AD08_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11585;old_locus_tag=AD08_2270 NZ_JHDJ01000155.1 Protein Homology CDS 39887 40762 . - 0 ID=cds-WP_001521288.1;Parent=gene-AD08_RS11585;Dbxref=Genbank:WP_001521288.1;Name=WP_001521288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000629094.1;locus_tag=AD08_RS11585;product=N-acetylmannosamine kinase;protein_id=WP_001521288.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 40796 41713 . - . ID=gene-AD08_RS11580;Name=AD08_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11580;old_locus_tag=AD08_2271 NZ_JHDJ01000155.1 Protein Homology CDS 40796 41713 . - 0 ID=cds-WP_001149832.1;Parent=gene-AD08_RS11580;Dbxref=Genbank:WP_001149832.1;Name=WP_001149832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149830.1;locus_tag=AD08_RS11580;product=N-acetylneuraminate lyase;protein_id=WP_001149832.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq pseudogene 41831 42229 . + . ID=gene-AD08_RS31195;Name=AD08_RS31195;end_range=42229,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31195;partial=true;pseudo=true NZ_JHDJ01000155.1 Protein Homology CDS 41831 42229 . + 0 ID=cds-AD08_RS31195;Parent=gene-AD08_RS31195;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=42229,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547016.1;locus_tag=AD08_RS31195;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 42375 42800 . + . ID=gene-AD08_RS11575;Name=AD08_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11575;old_locus_tag=AD08_2272 NZ_JHDJ01000155.1 Protein Homology CDS 42375 42800 . + 0 ID=cds-WP_000435656.1;Parent=gene-AD08_RS11575;Dbxref=Genbank:WP_000435656.1;Name=WP_000435656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AD08_RS11575;product=IS66 family insertion sequence hypothetical protein;protein_id=WP_000435656.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 42797 43147 . + . ID=gene-AD08_RS0126125;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AD08_RS0126125 NZ_JHDJ01000155.1 Protein Homology CDS 42797 43147 . + 0 ID=cds-WP_000624652.1;Parent=gene-AD08_RS0126125;Dbxref=Genbank:WP_000624652.1;Name=WP_000624652.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=AD08_RS0126125;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624652.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 43178 44791 . + . ID=gene-AD08_RS11570;Name=AD08_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11570;old_locus_tag=AD08_2274 NZ_JHDJ01000155.1 Protein Homology CDS 43178 44791 . + 0 ID=cds-WP_032218830.1;Parent=gene-AD08_RS11570;Dbxref=Genbank:WP_032218830.1;Name=WP_032218830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AD08_RS11570;product=IS66 family transposase;protein_id=WP_032218830.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 44995 45384 . + . ID=gene-AD08_RS0126130;Name=AD08_RS0126130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126130 NZ_JHDJ01000155.1 Protein Homology CDS 44995 45384 . + 0 ID=cds-WP_001282154.1;Parent=gene-AD08_RS0126130;Dbxref=Genbank:WP_001282154.1;Name=WP_001282154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000603938.1;locus_tag=AD08_RS0126130;product=transposase;protein_id=WP_001282154.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 45381 45728 . + . ID=gene-AD08_RS11565;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AD08_RS11565;old_locus_tag=AD08_2275 NZ_JHDJ01000155.1 Protein Homology CDS 45381 45728 . + 0 ID=cds-WP_032218831.1;Parent=gene-AD08_RS11565;Dbxref=Genbank:WP_032218831.1;Name=WP_032218831.1;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019104956.1;locus_tag=AD08_RS11565;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_032218831.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 45778 47316 . + . ID=gene-AD08_RS11560;Name=AD08_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11560;old_locus_tag=AD08_2276 NZ_JHDJ01000155.1 Protein Homology CDS 45778 47316 . + 0 ID=cds-WP_016232312.1;Parent=gene-AD08_RS11560;Dbxref=Genbank:WP_016232312.1;Name=WP_016232312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AD08_RS11560;product=IS66 family transposase;protein_id=WP_016232312.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq pseudogene 47355 47540 . - . ID=gene-AD08_RS31200;Name=AD08_RS31200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31200;partial=true;pseudo=true;start_range=.,47355 NZ_JHDJ01000155.1 Protein Homology CDS 47355 47540 . - 0 ID=cds-AD08_RS31200;Parent=gene-AD08_RS31200;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708754.1;locus_tag=AD08_RS31200;partial=true;product=hypothetical protein;pseudo=true;start_range=.,47355;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 47537 47920 . - . ID=gene-AD08_RS0126140;Name=AD08_RS0126140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126140 NZ_JHDJ01000155.1 Protein Homology CDS 47537 47920 . - 0 ID=cds-WP_016232313.1;Parent=gene-AD08_RS0126140;Dbxref=Genbank:WP_016232313.1;Name=WP_016232313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708755.1;locus_tag=AD08_RS0126140;product=hypothetical protein;protein_id=WP_016232313.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 48087 48656 . - . ID=gene-AD08_RS11555;Name=AD08_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11555;old_locus_tag=AD08_2278 NZ_JHDJ01000155.1 Protein Homology CDS 48087 48656 . - 0 ID=cds-WP_032218832.1;Parent=gene-AD08_RS11555;Dbxref=Genbank:WP_032218832.1;Name=WP_032218832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020238748.1;locus_tag=AD08_RS11555;product=inovirus Gp2 family protein;protein_id=WP_032218832.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq gene 49385 49534 . - . ID=gene-AD08_RS11545;Name=AD08_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11545;old_locus_tag=AD08_2280 NZ_JHDJ01000155.1 Protein Homology CDS 49385 49534 . - 0 ID=cds-WP_071528377.1;Parent=gene-AD08_RS11545;Dbxref=Genbank:WP_071528377.1;Name=WP_071528377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000850858.1;locus_tag=AD08_RS11545;product=hemolysin activation protein;protein_id=WP_071528377.1;transl_table=11 NZ_JHDJ01000155.1 RefSeq pseudogene 49823 49981 . + . ID=gene-AD08_RS31205;Name=AD08_RS31205;end_range=49981,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31205;old_locus_tag=AD08_2281;partial=true;pseudo=true NZ_JHDJ01000155.1 Protein Homology CDS 49823 49981 . + 0 ID=cds-AD08_RS31205;Parent=gene-AD08_RS31205;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=49981,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612254.1;locus_tag=AD08_RS31205;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JHDJ01000155.1 RefSeq pseudogene 50038 50662 . + . ID=gene-AD08_RS0126155;Name=AD08_RS0126155;end_range=50662,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0126155;partial=true;pseudo=true NZ_JHDJ01000155.1 Protein Homology CDS 50038 50662 . + 0 ID=cds-AD08_RS0126155;Parent=gene-AD08_RS0126155;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=50662,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS0126155;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000156.1 1 153937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000156.1 RefSeq region 1 153937 . + . ID=NZ_JHDJ01000156.1:1..153937;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000156.1 RefSeq pseudogene 1 380 . + . ID=gene-AD08_RS11535;Name=AD08_RS11535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS11535;old_locus_tag=AD08_2283;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000156.1 Protein Homology CDS 1 380 . + 2 ID=cds-AD08_RS11535;Parent=gene-AD08_RS11535;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS11535;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000156.1 RefSeq pseudogene 622 7693 . + . ID=gene-AD08_RS31720;Name=yeeJ;gbkey=Gene;gene=yeeJ;gene_biotype=pseudogene;locus_tag=AD08_RS31720;pseudo=true NZ_JHDJ01000156.1 Protein Homology CDS 622 7693 . + 0 ID=cds-AD08_RS31720;Parent=gene-AD08_RS31720;Note=frameshifted;gbkey=CDS;gene=yeeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416485.4;locus_tag=AD08_RS31720;product=inverse autotransporter adhesin YeeJ;pseudo=true;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 7955 9007 . - . ID=gene-AD08_RS11525;Name=AD08_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11525;old_locus_tag=AD08_2287 NZ_JHDJ01000156.1 Protein Homology CDS 7955 9007 . - 0 ID=cds-WP_000477878.1;Parent=gene-AD08_RS11525;Dbxref=Genbank:WP_000477878.1;Name=WP_000477878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310804.1;locus_tag=AD08_RS11525;product=glycosyltransferase family 9 protein;protein_id=WP_000477878.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 9322 10638 . + . ID=gene-AD08_RS11520;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=AD08_RS11520;old_locus_tag=AD08_2288 NZ_JHDJ01000156.1 Protein Homology CDS 9322 10638 . + 0 ID=cds-WP_000378572.1;Parent=gene-AD08_RS11520;Dbxref=Genbank:WP_000378572.1;Name=WP_000378572.1;gbkey=CDS;gene=shiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416488.1;locus_tag=AD08_RS11520;product=shikimate transporter;protein_id=WP_000378572.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 10740 12194 . + . ID=gene-AD08_RS11515;Name=amn;gbkey=Gene;gene=amn;gene_biotype=protein_coding;locus_tag=AD08_RS11515;old_locus_tag=AD08_2289 NZ_JHDJ01000156.1 Protein Homology CDS 10740 12194 . + 0 ID=cds-WP_001060244.1;Parent=gene-AD08_RS11515;Dbxref=Genbank:WP_001060244.1;Name=WP_001060244.1;gbkey=CDS;gene=amn;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310806.1;locus_tag=AD08_RS11515;product=AMP nucleosidase;protein_id=WP_001060244.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 12537 13253 . + . ID=gene-AD08_RS11510;Name=AD08_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11510;old_locus_tag=AD08_2290 NZ_JHDJ01000156.1 Protein Homology CDS 12537 13253 . + 0 ID=cds-WP_000532912.1;Parent=gene-AD08_RS11510;Dbxref=Genbank:WP_000532912.1;Name=WP_000532912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310807.1;locus_tag=AD08_RS11510;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532912.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 13706 13781 . - . ID=gene-AD08_RS11505;Name=AD08_RS11505;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS11505;old_locus_tag=AD08_2292 NZ_JHDJ01000156.1 tRNAscan-SE tRNA 13706 13781 . - . ID=rna-AD08_RS11505;Parent=gene-AD08_RS11505;anticodon=(pos:complement(13746..13748));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS11505;product=tRNA-Asn NZ_JHDJ01000156.1 tRNAscan-SE exon 13706 13781 . - . ID=exon-AD08_RS11505-1;Parent=rna-AD08_RS11505;anticodon=(pos:complement(13746..13748));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS11505;product=tRNA-Asn NZ_JHDJ01000156.1 RefSeq gene 13882 15369 . - . ID=gene-AD08_RS11500;Name=yeeO;gbkey=Gene;gene=yeeO;gene_biotype=protein_coding;locus_tag=AD08_RS11500;old_locus_tag=AD08_2293 NZ_JHDJ01000156.1 Protein Homology CDS 13882 15369 . - 0 ID=cds-WP_077699026.1;Parent=gene-AD08_RS11500;Dbxref=Genbank:WP_077699026.1;Name=WP_077699026.1;gbkey=CDS;gene=yeeO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001323172.1;locus_tag=AD08_RS11500;product=toxic metabolite efflux MATE transporter YeeO;protein_id=WP_077699026.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 15530 15605 . + . ID=gene-AD08_RS11495;Name=AD08_RS11495;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS11495;old_locus_tag=AD08_2294 NZ_JHDJ01000156.1 tRNAscan-SE tRNA 15530 15605 . + . ID=rna-AD08_RS11495;Parent=gene-AD08_RS11495;anticodon=(pos:15563..15565);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS11495;product=tRNA-Asn NZ_JHDJ01000156.1 tRNAscan-SE exon 15530 15605 . + . ID=exon-AD08_RS11495-1;Parent=rna-AD08_RS11495;anticodon=(pos:15563..15565);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS11495;product=tRNA-Asn NZ_JHDJ01000156.1 RefSeq gene 15767 17029 . + . ID=gene-AD08_RS11490;Name=AD08_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11490;old_locus_tag=AD08_2295 NZ_JHDJ01000156.1 Protein Homology CDS 15767 17029 . + 0 ID=cds-WP_000055676.1;Parent=gene-AD08_RS11490;Dbxref=Genbank:WP_000055676.1;Name=WP_000055676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541215.1;locus_tag=AD08_RS11490;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_000055676.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 18413 19297 . - . ID=gene-AD08_RS11485;Name=AD08_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11485;old_locus_tag=AD08_2297 NZ_JHDJ01000156.1 Protein Homology CDS 18413 19297 . - 0 ID=cds-WP_000041056.1;Parent=gene-AD08_RS11485;Dbxref=Genbank:WP_000041056.1;Name=WP_000041056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000041050.1;locus_tag=AD08_RS11485;product=DNA-binding protein;protein_id=WP_000041056.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq pseudogene 20149 20401 . - . ID=gene-AD08_RS0126170;Name=AD08_RS0126170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0126170;pseudo=true NZ_JHDJ01000156.1 Protein Homology CDS 20149 20401 . - 0 ID=cds-AD08_RS0126170;Parent=gene-AD08_RS0126170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000983578.1;locus_tag=AD08_RS0126170;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 20398 20859 . - . ID=gene-AD08_RS11480;Name=AD08_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11480;old_locus_tag=AD08_2302 NZ_JHDJ01000156.1 Protein Homology CDS 20398 20859 . - 0 ID=cds-WP_000246270.1;Parent=gene-AD08_RS11480;Dbxref=Genbank:WP_000246270.1;Name=WP_000246270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000246270.1;locus_tag=AD08_RS11480;product=hypothetical protein;protein_id=WP_000246270.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq pseudogene 21379 25546 . + . ID=gene-AD08_RS11475;Name=AD08_RS11475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS11475;old_locus_tag=AD08_2305;pseudo=true NZ_JHDJ01000156.1 Protein Homology CDS 21379 25546 . + 0 ID=cds-AD08_RS11475;Parent=gene-AD08_RS11475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001578540.1;locus_tag=AD08_RS11475;product=RHS repeat protein;pseudo=true;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 25549 26151 . + . ID=gene-AD08_RS11470;Name=AD08_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11470;old_locus_tag=AD08_2306 NZ_JHDJ01000156.1 Protein Homology CDS 25549 26151 . + 0 ID=cds-WP_001268524.1;Parent=gene-AD08_RS11470;Dbxref=Genbank:WP_001268524.1;Name=WP_001268524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001268525.1;locus_tag=AD08_RS11470;product=sel1 repeat family protein;protein_id=WP_001268524.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq pseudogene 26337 26521 . - . ID=gene-AD08_RS31725;Name=AD08_RS31725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31725;pseudo=true NZ_JHDJ01000156.1 Protein Homology CDS 26337 26521 . - 0 ID=cds-AD08_RS31725;Parent=gene-AD08_RS31725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020806082.1;locus_tag=AD08_RS31725;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 26493 27443 . - . ID=gene-AD08_RS11465;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=AD08_RS11465;old_locus_tag=AD08_2307 NZ_JHDJ01000156.1 Protein Homology CDS 26493 27443 . - 0 ID=cds-WP_001011017.1;Parent=gene-AD08_RS11465;Dbxref=Genbank:WP_001011017.1;Name=WP_001011017.1;gbkey=CDS;gene=cbl;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416492.1;locus_tag=AD08_RS11465;product=HTH-type transcriptional regulator Cbl;protein_id=WP_001011017.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 27545 28462 . - . ID=gene-AD08_RS11460;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=AD08_RS11460;old_locus_tag=AD08_2308 NZ_JHDJ01000156.1 Protein Homology CDS 27545 28462 . - 0 ID=cds-WP_001011454.1;Parent=gene-AD08_RS11460;Dbxref=Genbank:WP_001011454.1;Name=WP_001011454.1;gbkey=CDS;gene=nac;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310811.1;locus_tag=AD08_RS11460;product=nitrogen assimilation transcriptional regulator;protein_id=WP_001011454.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 28788 28863 . + . ID=gene-AD08_RS11455;Name=AD08_RS11455;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS11455;old_locus_tag=AD08_2309 NZ_JHDJ01000156.1 tRNAscan-SE tRNA 28788 28863 . + . ID=rna-AD08_RS11455;Parent=gene-AD08_RS11455;anticodon=(pos:28821..28823);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS11455;product=tRNA-Asn NZ_JHDJ01000156.1 tRNAscan-SE exon 28788 28863 . + . ID=exon-AD08_RS11455-1;Parent=rna-AD08_RS11455;anticodon=(pos:28821..28823);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS11455;product=tRNA-Asn NZ_JHDJ01000156.1 RefSeq gene 28922 29482 . - . ID=gene-AD08_RS11450;Name=AD08_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11450;old_locus_tag=AD08_2310 NZ_JHDJ01000156.1 Protein Homology CDS 28922 29482 . - 0 ID=cds-WP_000116014.1;Parent=gene-AD08_RS11450;Dbxref=Genbank:WP_000116014.1;Name=WP_000116014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000116120.1;locus_tag=AD08_RS11450;product=SIS domain-containing protein;protein_id=WP_000116014.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 29498 30250 . - . ID=gene-AD08_RS11445;Name=AD08_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11445;old_locus_tag=AD08_2311 NZ_JHDJ01000156.1 Protein Homology CDS 29498 30250 . - 0 ID=cds-WP_000064390.1;Parent=gene-AD08_RS11445;Dbxref=Genbank:WP_000064390.1;Name=WP_000064390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064391.1;locus_tag=AD08_RS11445;product=SDR family oxidoreductase;protein_id=WP_000064390.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 30348 30992 . - . ID=gene-AD08_RS11440;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=AD08_RS11440;old_locus_tag=AD08_2312 NZ_JHDJ01000156.1 Protein Homology CDS 30348 30992 . - 0 ID=cds-WP_001062776.1;Parent=gene-AD08_RS11440;Dbxref=Genbank:WP_001062776.1;Name=WP_001062776.1;gbkey=CDS;gene=rpe;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016247316.1;locus_tag=AD08_RS11440;product=ribulose-phosphate 3-epimerase;protein_id=WP_001062776.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 31015 32268 . - . ID=gene-AD08_RS11435;Name=AD08_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11435;old_locus_tag=AD08_2313 NZ_JHDJ01000156.1 Protein Homology CDS 31015 32268 . - 0 ID=cds-WP_000425553.1;Parent=gene-AD08_RS11435;Dbxref=Genbank:WP_000425553.1;Name=WP_000425553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008924526.1;locus_tag=AD08_RS11435;product=PTS galactitol transporter subunit IIC;protein_id=WP_000425553.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 32289 32582 . - . ID=gene-AD08_RS11430;Name=AD08_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11430;old_locus_tag=AD08_2314 NZ_JHDJ01000156.1 Protein Homology CDS 32289 32582 . - 0 ID=cds-WP_000608245.1;Parent=gene-AD08_RS11430;Dbxref=Genbank:WP_000608245.1;Name=WP_000608245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004105500.1;locus_tag=AD08_RS11430;product=PTS sugar transporter subunit IIB;protein_id=WP_000608245.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 32601 33044 . - . ID=gene-AD08_RS11425;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=AD08_RS11425;old_locus_tag=AD08_2315 NZ_JHDJ01000156.1 Protein Homology CDS 32601 33044 . - 0 ID=cds-WP_000623674.1;Parent=gene-AD08_RS11425;Dbxref=Genbank:WP_000623674.1;Name=WP_000623674.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607629.1;locus_tag=AD08_RS11425;product=PTS galactitol transporter subunit IIA;protein_id=WP_000623674.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 33372 34127 . - . ID=gene-AD08_RS11420;Name=AD08_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11420;old_locus_tag=AD08_2316 NZ_JHDJ01000156.1 Protein Homology CDS 33372 34127 . - 0 ID=cds-WP_000281586.1;Parent=gene-AD08_RS11420;Dbxref=Genbank:WP_000281586.1;Name=WP_000281586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000281586.1;locus_tag=AD08_RS11420;product=DeoR/GlpR transcriptional regulator;protein_id=WP_000281586.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 34475 35011 . + . ID=gene-AD08_RS11415;Name=AD08_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11415;old_locus_tag=AD08_2317 NZ_JHDJ01000156.1 Protein Homology CDS 34475 35011 . + 0 ID=cds-WP_000850106.1;Parent=gene-AD08_RS11415;Dbxref=Genbank:WP_000850106.1;Name=WP_000850106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000850105.1;locus_tag=AD08_RS11415;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_000850106.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 35015 36385 . + . ID=gene-AD08_RS11410;Name=AD08_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11410;old_locus_tag=AD08_2318 NZ_JHDJ01000156.1 Protein Homology CDS 35015 36385 . + 0 ID=cds-WP_000420479.1;Parent=gene-AD08_RS11410;Dbxref=Genbank:WP_000420479.1;Name=WP_000420479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564759.1;locus_tag=AD08_RS11410;product=PTS galactitol transporter subunit IIC;protein_id=WP_000420479.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 36409 36693 . + . ID=gene-AD08_RS11405;Name=AD08_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11405;old_locus_tag=AD08_2319 NZ_JHDJ01000156.1 Protein Homology CDS 36409 36693 . + 0 ID=cds-WP_000723158.1;Parent=gene-AD08_RS11405;Dbxref=Genbank:WP_000723158.1;Name=WP_000723158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172369.1;locus_tag=AD08_RS11405;product=PTS sugar transporter subunit IIB;protein_id=WP_000723158.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 36704 37162 . + . ID=gene-AD08_RS11400;Name=AD08_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11400;old_locus_tag=AD08_2320 NZ_JHDJ01000156.1 Protein Homology CDS 36704 37162 . + 0 ID=cds-WP_000667216.1;Parent=gene-AD08_RS11400;Dbxref=Genbank:WP_000667216.1;Name=WP_000667216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001683480.1;locus_tag=AD08_RS11400;product=PTS sugar transporter subunit IIA;protein_id=WP_000667216.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 37214 38179 . - . ID=gene-AD08_RS11395;Name=AD08_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11395;old_locus_tag=AD08_2321 NZ_JHDJ01000156.1 Protein Homology CDS 37214 38179 . - 0 ID=cds-WP_032218851.1;Parent=gene-AD08_RS11395;Dbxref=Genbank:WP_032218851.1;Name=WP_032218851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524950.1;locus_tag=AD08_RS11395;product=DeoR family transcriptional regulator;protein_id=WP_032218851.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 38353 39279 . - . ID=gene-AD08_RS11390;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=AD08_RS11390;old_locus_tag=AD08_2322 NZ_JHDJ01000156.1 Protein Homology CDS 38353 39279 . - 0 ID=cds-WP_072141914.1;Parent=gene-AD08_RS11390;Dbxref=Genbank:WP_072141914.1;Name=WP_072141914.1;gbkey=CDS;gene=ldtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001773987.1;locus_tag=AD08_RS11390;product=L%2CD-transpeptidase;protein_id=WP_072141914.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 39341 40420 . - . ID=gene-AD08_RS11385;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=AD08_RS11385;old_locus_tag=AD08_2323 NZ_JHDJ01000156.1 Protein Homology CDS 39341 40420 . - 0 ID=cds-WP_001193773.1;Parent=gene-AD08_RS11385;Dbxref=Genbank:WP_001193773.1;Name=WP_001193773.1;gbkey=CDS;gene=cobT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310813.1;locus_tag=AD08_RS11385;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001193773.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 40432 41175 . - . ID=gene-AD08_RS11380;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=AD08_RS11380;old_locus_tag=AD08_2324 NZ_JHDJ01000156.1 Protein Homology CDS 40432 41175 . - 0 ID=cds-WP_001297350.1;Parent=gene-AD08_RS11380;Dbxref=Genbank:WP_001297350.1;Name=WP_001297350.1;gbkey=CDS;gene=cobS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310814.1;locus_tag=AD08_RS11380;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_001297350.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 41172 41717 . - . ID=gene-AD08_RS11375;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=AD08_RS11375;old_locus_tag=AD08_2325 NZ_JHDJ01000156.1 Protein Homology CDS 41172 41717 . - 0 ID=cds-WP_000973159.1;Parent=gene-AD08_RS11375;Dbxref=Genbank:WP_000973159.1;Name=WP_000973159.1;gbkey=CDS;gene=cobU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416497.1;locus_tag=AD08_RS11375;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973159.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 41905 42075 . + . ID=gene-AD08_RS31215;Name=AD08_RS31215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31215 NZ_JHDJ01000156.1 Protein Homology CDS 41905 42075 . + 0 ID=cds-WP_032150116.1;Parent=gene-AD08_RS31215;Dbxref=Genbank:WP_032150116.1;Name=WP_032150116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000917607.1;locus_tag=AD08_RS31215;product=ethanolamine utilization protein;protein_id=WP_032150116.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 42176 42505 . - . ID=gene-AD08_RS11370;Name=AD08_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11370;old_locus_tag=AD08_2326 NZ_JHDJ01000156.1 Protein Homology CDS 42176 42505 . - 0 ID=cds-WP_000450409.1;Parent=gene-AD08_RS11370;Dbxref=Genbank:WP_000450409.1;Name=WP_000450409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310836.2;locus_tag=AD08_RS11370;product=DUF496 family protein;protein_id=WP_000450409.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 42677 43735 . - . ID=gene-AD08_RS11365;Name=AD08_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11365;old_locus_tag=AD08_2328 NZ_JHDJ01000156.1 Protein Homology CDS 42677 43735 . - 0 ID=cds-WP_001200891.1;Parent=gene-AD08_RS11365;Dbxref=Genbank:WP_001200891.1;Name=WP_001200891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416512.1;locus_tag=AD08_RS11365;product=FUSC family protein;protein_id=WP_001200891.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 43933 44406 . - . ID=gene-AD08_RS11360;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=AD08_RS11360;old_locus_tag=AD08_2329 NZ_JHDJ01000156.1 Protein Homology CDS 43933 44406 . - 0 ID=cds-WP_001105382.1;Parent=gene-AD08_RS11360;Dbxref=Genbank:WP_001105382.1;Name=WP_001105382.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310838.1;locus_tag=AD08_RS11360;product=DNA gyrase inhibitor SbmC;protein_id=WP_001105382.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 44525 45691 . - . ID=gene-AD08_RS11355;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=AD08_RS11355;old_locus_tag=AD08_2330 NZ_JHDJ01000156.1 Protein Homology CDS 44525 45691 . - 0 ID=cds-WP_001296209.1;Parent=gene-AD08_RS11355;Dbxref=Genbank:WP_001296209.1;Name=WP_001296209.1;gbkey=CDS;gene=dacD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416514.4;locus_tag=AD08_RS11355;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_001296209.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 45880 47307 . + . ID=gene-AD08_RS11350;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=AD08_RS11350;old_locus_tag=AD08_2331 NZ_JHDJ01000156.1 Protein Homology CDS 45880 47307 . + 0 ID=cds-WP_000980581.1;Parent=gene-AD08_RS11350;Dbxref=Genbank:WP_000980581.1;Name=WP_000980581.1;gbkey=CDS;gene=sbcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416515.1;locus_tag=AD08_RS11350;product=exodeoxyribonuclease I;protein_id=WP_000980581.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 47350 47577 . - . ID=gene-AD08_RS11345;Name=AD08_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11345;old_locus_tag=AD08_2332 NZ_JHDJ01000156.1 Protein Homology CDS 47350 47577 . - 0 ID=cds-WP_000985273.1;Parent=gene-AD08_RS11345;Dbxref=Genbank:WP_000985273.1;Name=WP_000985273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310841.1;locus_tag=AD08_RS11345;product=sulfurtransferase TusA family protein;protein_id=WP_000985273.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 47591 48649 . - . ID=gene-AD08_RS11340;Name=yeeE;gbkey=Gene;gene=yeeE;gene_biotype=protein_coding;locus_tag=AD08_RS11340;old_locus_tag=AD08_2333 NZ_JHDJ01000156.1 Protein Homology CDS 47591 48649 . - 0 ID=cds-WP_023568741.1;Parent=gene-AD08_RS11340;Dbxref=Genbank:WP_023568741.1;Name=WP_023568741.1;gbkey=CDS;gene=yeeE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416517.1;locus_tag=AD08_RS11340;product=transport protein YeeE;protein_id=WP_023568741.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 48828 50186 . - . ID=gene-AD08_RS11335;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=AD08_RS11335;old_locus_tag=AD08_2334 NZ_JHDJ01000156.1 Protein Homology CDS 48828 50186 . - 0 ID=cds-WP_000019197.1;Parent=gene-AD08_RS11335;Dbxref=Genbank:WP_000019197.1;Name=WP_000019197.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=AD08_RS11335;product=putrescine/proton symporter PlaP;protein_id=WP_000019197.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 50176 50238 . - . ID=gene-AD08_RS31220;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=AD08_RS31220 NZ_JHDJ01000156.1 Protein Homology CDS 50176 50238 . - 0 ID=cds-WP_010723108.1;Parent=gene-AD08_RS31220;Dbxref=Genbank:WP_010723108.1;Name=WP_010723108.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=AD08_RS31220;product=membrane protein YoeI;protein_id=WP_010723108.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 50453 51382 . - . ID=gene-AD08_RS11330;Name=AD08_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11330;old_locus_tag=AD08_2335 NZ_JHDJ01000156.1 Protein Homology CDS 50453 51382 . - 0 ID=cds-WP_032218855.1;Parent=gene-AD08_RS11330;Dbxref=Genbank:WP_032218855.1;Name=WP_032218855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416519.4;locus_tag=AD08_RS11330;product=LysR family transcriptional regulator;protein_id=WP_032218855.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 51428 52252 . - . ID=gene-AD08_RS11325;Name=AD08_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11325;old_locus_tag=AD08_2336 NZ_JHDJ01000156.1 Protein Homology CDS 51428 52252 . - 0 ID=cds-WP_000754737.1;Parent=gene-AD08_RS11325;Dbxref=Genbank:WP_000754737.1;Name=WP_000754737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310845.1;locus_tag=AD08_RS11325;product=SDR family oxidoreductase;protein_id=WP_000754737.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 52678 52728 . + . ID=gene-AD08_RS29045;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=AD08_RS29045 NZ_JHDJ01000156.1 Protein Homology CDS 52678 52728 . + 0 ID=cds-WP_001364200.1;Parent=gene-AD08_RS29045;Dbxref=Genbank:WP_001364200.1;Name=WP_001364200.1;gbkey=CDS;gene=hisL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=AD08_RS29045;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_JHDJ01000156.1 cmsearch sequence_feature 52704 52827 . + . ID=id-NZ_JHDJ01000156.1:52704..52827;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_JHDJ01000156.1 RefSeq gene 52874 53773 . + . ID=gene-AD08_RS11320;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=AD08_RS11320;old_locus_tag=AD08_2337 NZ_JHDJ01000156.1 Protein Homology CDS 52874 53773 . + 0 ID=cds-WP_000131776.1;Parent=gene-AD08_RS11320;Dbxref=Genbank:WP_000131776.1;Name=WP_000131776.1;gbkey=CDS;gene=hisG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=AD08_RS11320;product=ATP phosphoribosyltransferase;protein_id=WP_000131776.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 53779 55083 . + . ID=gene-AD08_RS11315;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=AD08_RS11315;old_locus_tag=AD08_2338 NZ_JHDJ01000156.1 Protein Homology CDS 53779 55083 . + 0 ID=cds-WP_032218856.1;Parent=gene-AD08_RS11315;Dbxref=Genbank:WP_032218856.1;Name=WP_032218856.1;gbkey=CDS;gene=hisD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128080.1;locus_tag=AD08_RS11315;product=histidinol dehydrogenase;protein_id=WP_032218856.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 55080 56150 . + . ID=gene-AD08_RS11310;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=AD08_RS11310;old_locus_tag=AD08_2339 NZ_JHDJ01000156.1 Protein Homology CDS 55080 56150 . + 0 ID=cds-WP_000108970.1;Parent=gene-AD08_RS11310;Dbxref=Genbank:WP_000108970.1;Name=WP_000108970.1;gbkey=CDS;gene=hisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310849.1;locus_tag=AD08_RS11310;product=histidinol-phosphate transaminase;protein_id=WP_000108970.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 56150 57217 . + . ID=gene-AD08_RS11305;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=AD08_RS11305;old_locus_tag=AD08_2340 NZ_JHDJ01000156.1 Protein Homology CDS 56150 57217 . + 0 ID=cds-WP_000080097.1;Parent=gene-AD08_RS11305;Dbxref=Genbank:WP_000080097.1;Name=WP_000080097.1;gbkey=CDS;gene=hisB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128082.1;locus_tag=AD08_RS11305;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_000080097.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 57217 57807 . + . ID=gene-AD08_RS11300;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=AD08_RS11300;old_locus_tag=AD08_2341 NZ_JHDJ01000156.1 Protein Homology CDS 57217 57807 . + 0 ID=cds-WP_001103560.1;Parent=gene-AD08_RS11300;Dbxref=Genbank:WP_001103560.1;Name=WP_001103560.1;gbkey=CDS;gene=hisH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=AD08_RS11300;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001103560.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 57807 58544 . + . ID=gene-AD08_RS11295;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=AD08_RS11295;old_locus_tag=AD08_2342 NZ_JHDJ01000156.1 Protein Homology CDS 57807 58544 . + 0 ID=cds-WP_000586449.1;Parent=gene-AD08_RS11295;Dbxref=Genbank:WP_000586449.1;Name=WP_000586449.1;gbkey=CDS;gene=hisA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310852.2;locus_tag=AD08_RS11295;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586449.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 58526 59302 . + . ID=gene-AD08_RS11290;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=AD08_RS11290;old_locus_tag=AD08_2343 NZ_JHDJ01000156.1 Protein Homology CDS 58526 59302 . + 0 ID=cds-WP_000880193.1;Parent=gene-AD08_RS11290;Dbxref=Genbank:WP_000880193.1;Name=WP_000880193.1;gbkey=CDS;gene=hisF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015853929.1;locus_tag=AD08_RS11290;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880193.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 59296 59907 . + . ID=gene-AD08_RS11285;Name=AD08_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11285;old_locus_tag=AD08_2344 NZ_JHDJ01000156.1 Protein Homology CDS 59296 59907 . + 0 ID=cds-WP_001594225.1;Parent=gene-AD08_RS11285;Dbxref=Genbank:WP_001594225.1;Name=WP_001594225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310854.1;locus_tag=AD08_RS11285;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_001594225.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 60004 60981 . - . ID=gene-AD08_RS11280;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=AD08_RS11280;old_locus_tag=AD08_2345 NZ_JHDJ01000156.1 Protein Homology CDS 60004 60981 . - 0 ID=cds-WP_001346883.1;Parent=gene-AD08_RS11280;Dbxref=Genbank:WP_001346883.1;Name=WP_001346883.1;gbkey=CDS;gene=wzzB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310855.3;locus_tag=AD08_RS11280;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_001346883.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 61390 62394 . + . ID=gene-AD08_RS11275;Name=AD08_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11275;old_locus_tag=AD08_2346 NZ_JHDJ01000156.1 Protein Homology CDS 61390 62394 . + 0 ID=cds-WP_032218858.1;Parent=gene-AD08_RS11275;Dbxref=Genbank:WP_032218858.1;Name=WP_032218858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572392.1;locus_tag=AD08_RS11275;product=NAD-dependent epimerase;protein_id=WP_032218858.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 62460 63626 . - . ID=gene-AD08_RS11270;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=AD08_RS11270;old_locus_tag=AD08_2347 NZ_JHDJ01000156.1 Protein Homology CDS 62460 63626 . - 0 ID=cds-WP_001570041.1;Parent=gene-AD08_RS11270;Dbxref=Genbank:WP_001570041.1;Name=WP_001570041.1;gbkey=CDS;gene=ugd;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227854.1;locus_tag=AD08_RS11270;product=UDP-glucose 6-dehydrogenase;protein_id=WP_001570041.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 63875 65281 . - . ID=gene-AD08_RS11265;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=AD08_RS11265;old_locus_tag=AD08_2348 NZ_JHDJ01000156.1 Protein Homology CDS 63875 65281 . - 0 ID=cds-WP_000043476.1;Parent=gene-AD08_RS11265;Dbxref=Genbank:WP_000043476.1;Name=WP_000043476.1;gbkey=CDS;gene=gndA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043504.1;locus_tag=AD08_RS11265;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_000043476.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 65364 66473 . - . ID=gene-AD08_RS11260;Name=AD08_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11260;old_locus_tag=AD08_2349 NZ_JHDJ01000156.1 Protein Homology CDS 65364 66473 . - 0 ID=cds-WP_000686711.1;Parent=gene-AD08_RS11260;Dbxref=Genbank:WP_000686711.1;Name=WP_000686711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527233.1;locus_tag=AD08_RS11260;product=glycosyltransferase family 4 protein;protein_id=WP_000686711.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 66470 67366 . - . ID=gene-AD08_RS11255;Name=AD08_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11255;old_locus_tag=AD08_2350 NZ_JHDJ01000156.1 GeneMarkS-2+ CDS 66470 67366 . - 0 ID=cds-WP_000786429.1;Parent=gene-AD08_RS11255;Dbxref=Genbank:WP_000786429.1;Name=WP_000786429.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS11255;product=glycosyltransferase;protein_id=WP_000786429.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 67377 68522 . - . ID=gene-AD08_RS11250;Name=AD08_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11250;old_locus_tag=AD08_2351 NZ_JHDJ01000156.1 Protein Homology CDS 67377 68522 . - 0 ID=cds-WP_032218863.1;Parent=gene-AD08_RS11250;Dbxref=Genbank:WP_032218863.1;Name=WP_032218863.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04370.1;locus_tag=AD08_RS11250;product=oligosaccharide repeat unit polymerase;protein_id=WP_032218863.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 68570 69655 . - . ID=gene-AD08_RS11245;Name=AD08_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11245;old_locus_tag=AD08_2352 NZ_JHDJ01000156.1 Protein Homology CDS 68570 69655 . - 0 ID=cds-WP_000862897.1;Parent=gene-AD08_RS11245;Dbxref=Genbank:WP_000862897.1;Name=WP_000862897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003469741.1;locus_tag=AD08_RS11245;product=glycosyl transferase;protein_id=WP_000862897.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 69671 70888 . - . ID=gene-AD08_RS11240;Name=AD08_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11240;old_locus_tag=AD08_2353 NZ_JHDJ01000156.1 Protein Homology CDS 69671 70888 . - 0 ID=cds-WP_012421603.1;Parent=gene-AD08_RS11240;Dbxref=Genbank:WP_012421603.1;Name=WP_012421603.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014051.1;locus_tag=AD08_RS11240;product=oligosaccharide flippase family protein;protein_id=WP_012421603.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq pseudogene 71058 71951 . - . ID=gene-AD08_RS11235;Name=AD08_RS11235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS11235;old_locus_tag=AD08_2354;partial=true;pseudo=true;start_range=.,71058 NZ_JHDJ01000156.1 Protein Homology CDS 71058 71951 . - 0 ID=cds-AD08_RS11235;Parent=gene-AD08_RS11235;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD08_RS11235;partial=true;product=ISAs1 family transposase;pseudo=true;start_range=.,71058;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 72231 72788 . - . ID=gene-AD08_RS11230;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=AD08_RS11230;old_locus_tag=AD08_2355 NZ_JHDJ01000156.1 Protein Homology CDS 72231 72788 . - 0 ID=cds-WP_032218868.1;Parent=gene-AD08_RS11230;Dbxref=Genbank:WP_032218868.1;Name=WP_032218868.1;gbkey=CDS;gene=rfbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864586.1;locus_tag=AD08_RS11230;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_032218868.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 72793 73671 . - . ID=gene-AD08_RS11225;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AD08_RS11225;old_locus_tag=AD08_2356 NZ_JHDJ01000156.1 Protein Homology CDS 72793 73671 . - 0 ID=cds-WP_000857519.1;Parent=gene-AD08_RS11225;Dbxref=Genbank:WP_000857519.1;Name=WP_000857519.1;gbkey=CDS;gene=rfbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707934.1;locus_tag=AD08_RS11225;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000857519.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 73729 74628 . - . ID=gene-AD08_RS11220;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=AD08_RS11220;old_locus_tag=AD08_2357 NZ_JHDJ01000156.1 Protein Homology CDS 73729 74628 . - 0 ID=cds-WP_001023644.1;Parent=gene-AD08_RS11220;Dbxref=Genbank:WP_001023644.1;Name=WP_001023644.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416544.1;locus_tag=AD08_RS11220;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_001023644.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 74628 75713 . - . ID=gene-AD08_RS11215;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=AD08_RS11215;old_locus_tag=AD08_2358 NZ_JHDJ01000156.1 Protein Homology CDS 74628 75713 . - 0 ID=cds-WP_000699399.1;Parent=gene-AD08_RS11215;Dbxref=Genbank:WP_000699399.1;Name=WP_000699399.1;gbkey=CDS;gene=rfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416545.1;locus_tag=AD08_RS11215;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000699399.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 76085 76978 . - . ID=gene-AD08_RS11210;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=AD08_RS11210;old_locus_tag=AD08_2359 NZ_JHDJ01000156.1 Protein Homology CDS 76085 76978 . - 0 ID=cds-WP_000183060.1;Parent=gene-AD08_RS11210;Dbxref=Genbank:WP_000183060.1;Name=WP_000183060.1;gbkey=CDS;gene=galF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310873.1;locus_tag=AD08_RS11210;product=UTP--glucose-1-phosphate uridylyltransferase GalF;protein_id=WP_000183060.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 77221 78216 . - . ID=gene-AD08_RS11205;Name=AD08_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11205;old_locus_tag=AD08_2360 NZ_JHDJ01000156.1 Protein Homology CDS 77221 78216 . - 0 ID=cds-WP_000999466.1;Parent=gene-AD08_RS11205;Dbxref=Genbank:WP_000999466.1;Name=WP_000999466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310874.1;locus_tag=AD08_RS11205;product=SDR family oxidoreductase;protein_id=WP_000999466.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 78374 79768 . - . ID=gene-AD08_RS11200;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=AD08_RS11200;old_locus_tag=AD08_2361 NZ_JHDJ01000156.1 Protein Homology CDS 78374 79768 . - 0 ID=cds-WP_032218869.1;Parent=gene-AD08_RS11200;Dbxref=Genbank:WP_032218869.1;Name=WP_032218869.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707938.1;locus_tag=AD08_RS11200;product=colanic acid biosynthesis protein WcaM;protein_id=WP_032218869.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 79779 80999 . - . ID=gene-AD08_RS11195;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=AD08_RS11195;old_locus_tag=AD08_2362 NZ_JHDJ01000156.1 Protein Homology CDS 79779 80999 . - 0 ID=cds-WP_000862598.1;Parent=gene-AD08_RS11195;Dbxref=Genbank:WP_000862598.1;Name=WP_000862598.1;gbkey=CDS;gene=wcaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416548.1;locus_tag=AD08_RS11195;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_000862598.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 80996 82276 . - . ID=gene-AD08_RS11190;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=AD08_RS11190;old_locus_tag=AD08_2363 NZ_JHDJ01000156.1 Protein Homology CDS 80996 82276 . - 0 ID=cds-WP_032218872.1;Parent=gene-AD08_RS11190;Dbxref=Genbank:WP_032218872.1;Name=WP_032218872.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416549.1;locus_tag=AD08_RS11190;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_032218872.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 83130 84608 . - . ID=gene-AD08_RS11185;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=AD08_RS11185;old_locus_tag=AD08_2364 NZ_JHDJ01000156.1 Protein Homology CDS 83130 84608 . - 0 ID=cds-WP_032218873.1;Parent=gene-AD08_RS11185;Dbxref=Genbank:WP_032218873.1;Name=WP_032218873.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310878.1;locus_tag=AD08_RS11185;product=M-antigen undecaprenyl disphosphate flippase;protein_id=WP_032218873.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 84610 86004 . - . ID=gene-AD08_RS11180;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=AD08_RS11180;old_locus_tag=AD08_2365 NZ_JHDJ01000156.1 Protein Homology CDS 84610 86004 . - 0 ID=cds-WP_000183130.1;Parent=gene-AD08_RS11180;Dbxref=Genbank:WP_000183130.1;Name=WP_000183130.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310879.1;locus_tag=AD08_RS11180;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_000183130.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 86059 87429 . - . ID=gene-AD08_RS11175;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;locus_tag=AD08_RS11175;old_locus_tag=AD08_2366 NZ_JHDJ01000156.1 Protein Homology CDS 86059 87429 . - 0 ID=cds-WP_012601604.1;Parent=gene-AD08_RS11175;Dbxref=Genbank:WP_012601604.1;Name=WP_012601604.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416552.1;locus_tag=AD08_RS11175;product=phosphomannomutase CpsG;protein_id=WP_012601604.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 87622 89058 . - . ID=gene-AD08_RS11170;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=AD08_RS11170;old_locus_tag=AD08_2368 NZ_JHDJ01000156.1 Protein Homology CDS 87622 89058 . - 0 ID=cds-WP_000079309.1;Parent=gene-AD08_RS11170;Dbxref=Genbank:WP_000079309.1;Name=WP_000079309.1;gbkey=CDS;gene=cpsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310881.1;locus_tag=AD08_RS11170;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000079309.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 89061 90284 . - . ID=gene-AD08_RS11165;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=AD08_RS11165;old_locus_tag=AD08_2369 NZ_JHDJ01000156.1 Protein Homology CDS 89061 90284 . - 0 ID=cds-WP_000699700.1;Parent=gene-AD08_RS11165;Dbxref=Genbank:WP_000699700.1;Name=WP_000699700.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310882.1;locus_tag=AD08_RS11165;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_000699700.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 90281 90760 . - . ID=gene-AD08_RS11160;Name=AD08_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11160;old_locus_tag=AD08_2370 NZ_JHDJ01000156.1 Protein Homology CDS 90281 90760 . - 0 ID=cds-WP_000479827.1;Parent=gene-AD08_RS11160;Dbxref=Genbank:WP_000479827.1;Name=WP_000479827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707946.2;locus_tag=AD08_RS11160;product=GDP-mannose mannosyl hydrolase;protein_id=WP_000479827.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 90763 91728 . - . ID=gene-AD08_RS11155;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=AD08_RS11155;old_locus_tag=AD08_2371 NZ_JHDJ01000156.1 Protein Homology CDS 90763 91728 . - 0 ID=cds-WP_003911436.1;Parent=gene-AD08_RS11155;Dbxref=Genbank:WP_003911436.1;Name=WP_003911436.1;gbkey=CDS;gene=fcl;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310884.1;locus_tag=AD08_RS11155;product=GDP-L-fucose synthase;protein_id=WP_003911436.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 91731 92852 . - . ID=gene-AD08_RS11150;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=AD08_RS11150;old_locus_tag=AD08_2372 NZ_JHDJ01000156.1 Protein Homology CDS 91731 92852 . - 0 ID=cds-WP_000048190.1;Parent=gene-AD08_RS11150;Dbxref=Genbank:WP_000048190.1;Name=WP_000048190.1;gbkey=CDS;gene=gmd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=AD08_RS11150;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048190.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 92878 93426 . - . ID=gene-AD08_RS11145;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=AD08_RS11145;old_locus_tag=AD08_2373 NZ_JHDJ01000156.1 Protein Homology CDS 92878 93426 . - 0 ID=cds-WP_001153547.1;Parent=gene-AD08_RS11145;Dbxref=Genbank:WP_001153547.1;Name=WP_001153547.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416558.1;locus_tag=AD08_RS11145;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153547.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 93442 94188 . - . ID=gene-AD08_RS11140;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=AD08_RS11140;old_locus_tag=AD08_2374 NZ_JHDJ01000156.1 Protein Homology CDS 93442 94188 . - 0 ID=cds-WP_000927072.1;Parent=gene-AD08_RS11140;Dbxref=Genbank:WP_000927072.1;Name=WP_000927072.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416559.1;locus_tag=AD08_RS11140;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_000927072.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 94199 95416 . - . ID=gene-AD08_RS11135;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=AD08_RS11135;old_locus_tag=AD08_2375 NZ_JHDJ01000156.1 Protein Homology CDS 94199 95416 . - 0 ID=cds-WP_000107816.1;Parent=gene-AD08_RS11135;Dbxref=Genbank:WP_000107816.1;Name=WP_000107816.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416560.1;locus_tag=AD08_RS11135;product=putative colanic acid polymerase WcaD;protein_id=WP_000107816.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 95391 96608 . - . ID=gene-AD08_RS11130;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=AD08_RS11130;old_locus_tag=AD08_2376 NZ_JHDJ01000156.1 Protein Homology CDS 95391 96608 . - 0 ID=cds-WP_032218877.1;Parent=gene-AD08_RS11130;Dbxref=Genbank:WP_032218877.1;Name=WP_032218877.1;gbkey=CDS;gene=wcaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310889.1;locus_tag=AD08_RS11130;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_032218877.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 96605 97093 . - . ID=gene-AD08_RS11125;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=AD08_RS11125;old_locus_tag=AD08_2377 NZ_JHDJ01000156.1 Protein Homology CDS 96605 97093 . - 0 ID=cds-WP_000888740.1;Parent=gene-AD08_RS11125;Dbxref=Genbank:WP_000888740.1;Name=WP_000888740.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310890.1;locus_tag=AD08_RS11125;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888740.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 97096 97935 . - . ID=gene-AD08_RS11120;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=AD08_RS11120;old_locus_tag=AD08_2378 NZ_JHDJ01000156.1 Protein Homology CDS 97096 97935 . - 0 ID=cds-WP_000654491.1;Parent=gene-AD08_RS11120;Dbxref=Genbank:WP_000654491.1;Name=WP_000654491.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310891.1;locus_tag=AD08_RS11120;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000654491.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 98028 100190 . - . ID=gene-AD08_RS11115;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=AD08_RS11115;old_locus_tag=AD08_2379 NZ_JHDJ01000156.1 Protein Homology CDS 98028 100190 . - 0 ID=cds-WP_000137111.1;Parent=gene-AD08_RS11115;Dbxref=Genbank:WP_000137111.1;Name=WP_000137111.1;gbkey=CDS;gene=wzc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416564.4;locus_tag=AD08_RS11115;product=tyrosine-protein kinase Wzc;protein_id=WP_000137111.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 100193 100636 . - . ID=gene-AD08_RS11110;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=AD08_RS11110;old_locus_tag=AD08_2380 NZ_JHDJ01000156.1 Protein Homology CDS 100193 100636 . - 0 ID=cds-WP_000482891.1;Parent=gene-AD08_RS11110;Dbxref=Genbank:WP_000482891.1;Name=WP_000482891.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310893.1;locus_tag=AD08_RS11110;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482891.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 100642 101781 . - . ID=gene-AD08_RS11105;Name=AD08_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11105;old_locus_tag=AD08_2381 NZ_JHDJ01000156.1 Protein Homology CDS 100642 101781 . - 0 ID=cds-WP_001374066.1;Parent=gene-AD08_RS11105;Dbxref=Genbank:WP_001374066.1;Name=WP_001374066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310894.1;locus_tag=AD08_RS11105;product=polysaccharide export protein Wza;protein_id=WP_001374066.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 102440 104023 . + . ID=gene-AD08_RS11100;Name=AD08_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11100;old_locus_tag=AD08_2383 NZ_JHDJ01000156.1 Protein Homology CDS 102440 104023 . + 0 ID=cds-WP_001410448.1;Parent=gene-AD08_RS11100;Dbxref=Genbank:WP_001410448.1;Name=WP_001410448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416567.4;locus_tag=AD08_RS11100;product=TerC family protein;protein_id=WP_001410448.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 104316 106169 . - . ID=gene-AD08_RS11095;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=AD08_RS11095;old_locus_tag=AD08_2384 NZ_JHDJ01000156.1 Protein Homology CDS 104316 106169 . - 0 ID=cds-WP_032218880.1;Parent=gene-AD08_RS11095;Dbxref=Genbank:WP_032218880.1;Name=WP_032218880.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416568.1;locus_tag=AD08_RS11095;product=outer membrane assembly protein AsmA;protein_id=WP_032218880.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 106191 106772 . - . ID=gene-AD08_RS11090;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=AD08_RS11090;old_locus_tag=AD08_2385 NZ_JHDJ01000156.1 Protein Homology CDS 106191 106772 . - 0 ID=cds-WP_001234767.1;Parent=gene-AD08_RS11090;Dbxref=Genbank:WP_001234767.1;Name=WP_001234767.1;gbkey=CDS;gene=dcd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707959.1;locus_tag=AD08_RS11090;product=dCTP deaminase;protein_id=WP_001234767.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 106864 107505 . - . ID=gene-AD08_RS11085;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=AD08_RS11085;old_locus_tag=AD08_2386 NZ_JHDJ01000156.1 Protein Homology CDS 106864 107505 . - 0 ID=cds-WP_001295424.1;Parent=gene-AD08_RS11085;Dbxref=Genbank:WP_001295424.1;Name=WP_001295424.1;gbkey=CDS;gene=udk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707960.1;locus_tag=AD08_RS11085;product=uridine kinase;protein_id=WP_001295424.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 107822 111139 . + . ID=gene-AD08_RS11080;Name=AD08_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11080;old_locus_tag=AD08_2387 NZ_JHDJ01000156.1 Protein Homology CDS 107822 111139 . + 0 ID=cds-WP_032218884.1;Parent=gene-AD08_RS11080;Dbxref=Genbank:WP_032218884.1;Name=WP_032218884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416571.1;locus_tag=AD08_RS11080;product=diguanylate cyclase;protein_id=WP_032218884.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 111248 112096 . - . ID=gene-AD08_RS11075;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=AD08_RS11075;old_locus_tag=AD08_2388 NZ_JHDJ01000156.1 Protein Homology CDS 111248 112096 . - 0 ID=cds-WP_000288398.1;Parent=gene-AD08_RS11075;Dbxref=Genbank:WP_000288398.1;Name=WP_000288398.1;gbkey=CDS;gene=alkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310904.1;locus_tag=AD08_RS11075;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_000288398.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 112230 113582 . + . ID=gene-AD08_RS11070;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=AD08_RS11070;old_locus_tag=AD08_2389 NZ_JHDJ01000156.1 Protein Homology CDS 112230 113582 . + 0 ID=cds-WP_000469695.1;Parent=gene-AD08_RS11070;Dbxref=Genbank:WP_000469695.1;Name=WP_000469695.1;gbkey=CDS;gene=yegD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416573.4;locus_tag=AD08_RS11070;product=molecular chaperone;protein_id=WP_000469695.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 113595 115535 . - . ID=gene-AD08_RS11065;Name=yegI;gbkey=Gene;gene=yegI;gene_biotype=protein_coding;locus_tag=AD08_RS11065;old_locus_tag=AD08_2390 NZ_JHDJ01000156.1 Protein Homology CDS 113595 115535 . - 0 ID=cds-WP_032218889.1;Parent=gene-AD08_RS11065;Dbxref=Genbank:WP_032218889.1;Name=WP_032218889.1;gbkey=CDS;gene=yegI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310906.2;locus_tag=AD08_RS11065;product=protein kinase YegI;protein_id=WP_032218889.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 115532 116293 . - . ID=gene-AD08_RS11060;Name=AD08_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11060;old_locus_tag=AD08_2391 NZ_JHDJ01000156.1 Protein Homology CDS 115532 116293 . - 0 ID=cds-WP_000119054.1;Parent=gene-AD08_RS11060;Dbxref=Genbank:WP_000119054.1;Name=WP_000119054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707964.1;locus_tag=AD08_RS11060;product=protein phosphatase 2C domain-containing protein;protein_id=WP_000119054.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 116290 116949 . - . ID=gene-AD08_RS11055;Name=AD08_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11055;old_locus_tag=AD08_2392 NZ_JHDJ01000156.1 Protein Homology CDS 116290 116949 . - 0 ID=cds-WP_001410457.1;Parent=gene-AD08_RS11055;Dbxref=Genbank:WP_001410457.1;Name=WP_001410457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310908.1;locus_tag=AD08_RS11055;product=VWA domain-containing protein;protein_id=WP_001410457.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 117170 117229 . - . ID=gene-AD08_RS31225;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=AD08_RS31225 NZ_JHDJ01000156.1 Protein Homology CDS 117170 117229 . - 0 ID=cds-WP_071528451.1;Parent=gene-AD08_RS31225;Dbxref=Genbank:WP_071528451.1;Name=WP_071528451.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=AD08_RS31225;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_071528451.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 117501 117557 . - . ID=gene-AD08_RS31230;Name=AD08_RS31230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31230 NZ_JHDJ01000156.1 Protein Homology CDS 117501 117557 . - 0 ID=cds-WP_100249772.1;Parent=gene-AD08_RS31230;Dbxref=Genbank:WP_100249772.1;Name=WP_100249772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791248.1;locus_tag=AD08_RS31230;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_100249772.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 117829 117885 . - . ID=gene-AD08_RS31235;Name=AD08_RS31235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31235 NZ_JHDJ01000156.1 Protein Homology CDS 117829 117885 . - 0 ID=cds-WP_012767741.1;Parent=gene-AD08_RS31235;Dbxref=Genbank:WP_012767741.1;Name=WP_012767741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791248.1;locus_tag=AD08_RS31235;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_012767741.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 118164 119411 . + . ID=gene-AD08_RS11050;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=AD08_RS11050;old_locus_tag=AD08_2393 NZ_JHDJ01000156.1 Protein Homology CDS 118164 119411 . + 0 ID=cds-WP_000679002.1;Parent=gene-AD08_RS11050;Dbxref=Genbank:WP_000679002.1;Name=WP_000679002.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416578.2;locus_tag=AD08_RS11050;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_000679002.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 119411 122533 . + . ID=gene-AD08_RS11045;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=AD08_RS11045;old_locus_tag=AD08_2394 NZ_JHDJ01000156.1 Protein Homology CDS 119411 122533 . + 0 ID=cds-WP_001197880.1;Parent=gene-AD08_RS11045;Dbxref=Genbank:WP_001197880.1;Name=WP_001197880.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310910.1;locus_tag=AD08_RS11045;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_001197880.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 122534 125611 . + . ID=gene-AD08_RS11040;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=AD08_RS11040;old_locus_tag=AD08_2395 NZ_JHDJ01000156.1 Protein Homology CDS 122534 125611 . + 0 ID=cds-WP_032218894.1;Parent=gene-AD08_RS11040;Dbxref=Genbank:WP_032218894.1;Name=WP_032218894.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416580.1;locus_tag=AD08_RS11040;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_032218894.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 125612 127027 . + . ID=gene-AD08_RS11035;Name=AD08_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11035;old_locus_tag=AD08_2396 NZ_JHDJ01000156.1 Protein Homology CDS 125612 127027 . + 0 ID=cds-WP_000130842.1;Parent=gene-AD08_RS11035;Dbxref=Genbank:WP_000130842.1;Name=WP_000130842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416581.1;locus_tag=AD08_RS11035;product=MFS transporter;protein_id=WP_000130842.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 127024 128427 . + . ID=gene-AD08_RS11030;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=AD08_RS11030;old_locus_tag=AD08_2397 NZ_JHDJ01000156.1 Protein Homology CDS 127024 128427 . + 0 ID=cds-WP_001720293.1;Parent=gene-AD08_RS11030;Dbxref=Genbank:WP_001720293.1;Name=WP_001720293.1;gbkey=CDS;gene=baeS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310913.1;locus_tag=AD08_RS11030;product=two-component system sensor histidine kinase BaeS;protein_id=WP_001720293.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 128424 129146 . + . ID=gene-AD08_RS11025;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=AD08_RS11025;old_locus_tag=AD08_2398 NZ_JHDJ01000156.1 Protein Homology CDS 128424 129146 . + 0 ID=cds-WP_000137877.1;Parent=gene-AD08_RS11025;Dbxref=Genbank:WP_000137877.1;Name=WP_000137877.1;gbkey=CDS;gene=baeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416583.1;locus_tag=AD08_RS11025;product=two-component system response regulator BaeR;protein_id=WP_000137877.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 129337 129669 . + . ID=gene-AD08_RS11020;Name=AD08_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11020;old_locus_tag=AD08_2400 NZ_JHDJ01000156.1 Protein Homology CDS 129337 129669 . + 0 ID=cds-WP_000929408.1;Parent=gene-AD08_RS11020;Dbxref=Genbank:WP_000929408.1;Name=WP_000929408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310915.2;locus_tag=AD08_RS11020;product=YegP family protein;protein_id=WP_000929408.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 129816 131177 . + . ID=gene-AD08_RS11015;Name=AD08_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11015;old_locus_tag=AD08_2401 NZ_JHDJ01000156.1 Protein Homology CDS 129816 131177 . + 0 ID=cds-WP_000476014.1;Parent=gene-AD08_RS11015;Dbxref=Genbank:WP_000476014.1;Name=WP_000476014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310916.1;locus_tag=AD08_RS11015;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_000476014.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 131507 131824 . - . ID=gene-AD08_RS11010;Name=AD08_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11010;old_locus_tag=AD08_2402 NZ_JHDJ01000156.1 Protein Homology CDS 131507 131824 . - 0 ID=cds-WP_000716757.1;Parent=gene-AD08_RS11010;Dbxref=Genbank:WP_000716757.1;Name=WP_000716757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310918.2;locus_tag=AD08_RS11010;product=hypothetical protein;protein_id=WP_000716757.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 132230 133129 . + . ID=gene-AD08_RS11005;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=AD08_RS11005;old_locus_tag=AD08_2403 NZ_JHDJ01000156.1 Protein Homology CDS 132230 133129 . + 0 ID=cds-WP_000807362.1;Parent=gene-AD08_RS11005;Dbxref=Genbank:WP_000807362.1;Name=WP_000807362.1;gbkey=CDS;gene=yegS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310919.1;locus_tag=AD08_RS11005;product=lipid kinase YegS;protein_id=WP_000807362.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 133211 133990 . - . ID=gene-AD08_RS11000;Name=AD08_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS11000;old_locus_tag=AD08_2404 NZ_JHDJ01000156.1 Protein Homology CDS 133211 133990 . - 0 ID=cds-WP_077636227.1;Parent=gene-AD08_RS11000;Dbxref=Genbank:WP_077636227.1;Name=WP_077636227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310920.1;locus_tag=AD08_RS11000;product=DeoR/GlpR transcriptional regulator;protein_id=WP_077636227.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 134090 135130 . - . ID=gene-AD08_RS10995;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=AD08_RS10995;old_locus_tag=AD08_2405 NZ_JHDJ01000156.1 Protein Homology CDS 134090 135130 . - 0 ID=cds-WP_032218896.1;Parent=gene-AD08_RS10995;Dbxref=Genbank:WP_032218896.1;Name=WP_032218896.1;gbkey=CDS;gene=gatD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310921.1;locus_tag=AD08_RS10995;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_032218896.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 135178 136533 . - . ID=gene-AD08_RS10990;Name=AD08_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10990;old_locus_tag=AD08_2406 NZ_JHDJ01000156.1 Protein Homology CDS 135178 136533 . - 0 ID=cds-WP_032217530.1-2;Parent=gene-AD08_RS10990;Dbxref=Genbank:WP_032217530.1;Name=WP_032217530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310922.1;locus_tag=AD08_RS10990;product=PTS galactitol transporter subunit IIC;protein_id=WP_032217530.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 136537 136821 . - . ID=gene-AD08_RS10985;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=AD08_RS10985;old_locus_tag=AD08_2407 NZ_JHDJ01000156.1 Protein Homology CDS 136537 136821 . - 0 ID=cds-WP_000823272.1;Parent=gene-AD08_RS10985;Dbxref=Genbank:WP_000823272.1;Name=WP_000823272.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416596.1;locus_tag=AD08_RS10985;product=PTS galactitol transporter subunit IIB;protein_id=WP_000823272.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 136852 137304 . - . ID=gene-AD08_RS10980;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=AD08_RS10980;old_locus_tag=AD08_2408 NZ_JHDJ01000156.1 Protein Homology CDS 136852 137304 . - 0 ID=cds-WP_000182904.1;Parent=gene-AD08_RS10980;Dbxref=Genbank:WP_000182904.1;Name=WP_000182904.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310924.1;locus_tag=AD08_RS10980;product=PTS galactitol transporter subunit IIA;protein_id=WP_000182904.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 137314 138576 . - . ID=gene-AD08_RS10975;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=AD08_RS10975;old_locus_tag=AD08_2409 NZ_JHDJ01000156.1 Protein Homology CDS 137314 138576 . - 0 ID=cds-WP_000853861.1;Parent=gene-AD08_RS10975;Dbxref=Genbank:WP_000853861.1;Name=WP_000853861.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416598.1;locus_tag=AD08_RS10975;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_000853861.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 138605 139459 . - . ID=gene-AD08_RS10970;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=AD08_RS10970;old_locus_tag=AD08_2410 NZ_JHDJ01000156.1 Protein Homology CDS 138605 139459 . - 0 ID=cds-WP_000289788.1;Parent=gene-AD08_RS10970;Dbxref=Genbank:WP_000289788.1;Name=WP_000289788.1;gbkey=CDS;gene=gatY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416599.2;locus_tag=AD08_RS10970;product=tagatose-bisphosphate aldolase subunit GatY;protein_id=WP_000289788.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 139767 140819 . - . ID=gene-AD08_RS10965;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=AD08_RS10965;old_locus_tag=AD08_2411 NZ_JHDJ01000156.1 Protein Homology CDS 139767 140819 . - 0 ID=cds-WP_000129551.1;Parent=gene-AD08_RS10965;Dbxref=Genbank:WP_000129551.1;Name=WP_000129551.1;gbkey=CDS;gene=fbaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=AD08_RS10965;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129551.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 141076 142353 . + . ID=gene-AD08_RS10960;Name=AD08_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10960;old_locus_tag=AD08_2413 NZ_JHDJ01000156.1 Protein Homology CDS 141076 142353 . + 0 ID=cds-WP_000858518.1;Parent=gene-AD08_RS10960;Dbxref=Genbank:WP_000858518.1;Name=WP_000858518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416601.1;locus_tag=AD08_RS10960;product=MFS transporter;protein_id=WP_000858518.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 142350 143354 . + . ID=gene-AD08_RS10955;Name=AD08_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10955;old_locus_tag=AD08_2414 NZ_JHDJ01000156.1 Protein Homology CDS 142350 143354 . + 0 ID=cds-WP_000846215.1;Parent=gene-AD08_RS10955;Dbxref=Genbank:WP_000846215.1;Name=WP_000846215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416602.1;locus_tag=AD08_RS10955;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000846215.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 143351 144316 . + . ID=gene-AD08_RS10950;Name=AD08_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10950;old_locus_tag=AD08_2415 NZ_JHDJ01000156.1 Protein Homology CDS 143351 144316 . + 0 ID=cds-WP_032218899.1;Parent=gene-AD08_RS10950;Dbxref=Genbank:WP_032218899.1;Name=WP_032218899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416603.1;locus_tag=AD08_RS10950;product=sugar kinase;protein_id=WP_032218899.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 144290 145036 . - . ID=gene-AD08_RS10945;Name=AD08_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10945;old_locus_tag=AD08_2416 NZ_JHDJ01000156.1 Protein Homology CDS 144290 145036 . - 0 ID=cds-WP_000434038.1;Parent=gene-AD08_RS10945;Dbxref=Genbank:WP_000434038.1;Name=WP_000434038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310931.1;locus_tag=AD08_RS10945;product=GntR family transcriptional regulator;protein_id=WP_000434038.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 145088 145906 . - . ID=gene-AD08_RS10940;Name=AD08_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10940;old_locus_tag=AD08_2417 NZ_JHDJ01000156.1 Protein Homology CDS 145088 145906 . - 0 ID=cds-WP_032218902.1;Parent=gene-AD08_RS10940;Dbxref=Genbank:WP_032218902.1;Name=WP_032218902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416605.2;locus_tag=AD08_RS10940;product=glycoside hydrolase family 25 protein;protein_id=WP_032218902.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 145971 146771 . - . ID=gene-AD08_RS10935;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=AD08_RS10935;old_locus_tag=AD08_2418 NZ_JHDJ01000156.1 Protein Homology CDS 145971 146771 . - 0 ID=cds-WP_000822274.1;Parent=gene-AD08_RS10935;Dbxref=Genbank:WP_000822274.1;Name=WP_000822274.1;gbkey=CDS;gene=thiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416606.1;locus_tag=AD08_RS10935;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_000822274.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 146768 147556 . - . ID=gene-AD08_RS10930;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=AD08_RS10930;old_locus_tag=AD08_2419 NZ_JHDJ01000156.1 Protein Homology CDS 146768 147556 . - 0 ID=cds-WP_001195566.1;Parent=gene-AD08_RS10930;Dbxref=Genbank:WP_001195566.1;Name=WP_001195566.1;gbkey=CDS;gene=thiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416607.1;locus_tag=AD08_RS10930;product=hydroxyethylthiazole kinase;protein_id=WP_001195566.1;transl_table=11 NZ_JHDJ01000156.1 cmsearch riboswitch 147591 147687 . - . ID=id-NZ_JHDJ01000156.1:147591..147687;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_JHDJ01000156.1 RefSeq gene 147779 148051 . - . ID=gene-AD08_RS10925;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=AD08_RS10925;old_locus_tag=AD08_2420 NZ_JHDJ01000156.1 Protein Homology CDS 147779 148051 . - 0 ID=cds-WP_000019944.1;Parent=gene-AD08_RS10925;Dbxref=Genbank:WP_000019944.1;Name=WP_000019944.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310938.1;locus_tag=AD08_RS10925;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019944.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 148172 148996 . + . ID=gene-AD08_RS10920;Name=AD08_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10920;old_locus_tag=AD08_2421 NZ_JHDJ01000156.1 Protein Homology CDS 148172 148996 . + 0 ID=cds-WP_000134636.1;Parent=gene-AD08_RS10920;Dbxref=Genbank:WP_000134636.1;Name=WP_000134636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416609.1;locus_tag=AD08_RS10920;product=nickel/cobalt efflux protein RcnA;protein_id=WP_000134636.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 149215 149553 . + . ID=gene-AD08_RS10915;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=AD08_RS10915;old_locus_tag=AD08_2422 NZ_JHDJ01000156.1 Protein Homology CDS 149215 149553 . + 0 ID=cds-WP_032218903.1;Parent=gene-AD08_RS10915;Dbxref=Genbank:WP_032218903.1;Name=WP_032218903.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416610.4;locus_tag=AD08_RS10915;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_032218903.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 149635 150669 . - . ID=gene-AD08_RS10910;Name=AD08_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10910;old_locus_tag=AD08_2423 NZ_JHDJ01000156.1 Protein Homology CDS 149635 150669 . - 0 ID=cds-WP_032218904.1;Parent=gene-AD08_RS10910;Dbxref=Genbank:WP_032218904.1;Name=WP_032218904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416611.1;locus_tag=AD08_RS10910;product=putative fimbrial-like adhesin protein;protein_id=WP_032218904.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 150685 153057 . - . ID=gene-AD08_RS29085;Name=AD08_RS29085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS29085;old_locus_tag=AD08_2424 NZ_JHDJ01000156.1 Protein Homology CDS 150685 153057 . - 0 ID=cds-WP_113706220.1;Parent=gene-AD08_RS29085;Dbxref=Genbank:WP_113706220.1;Name=WP_113706220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020232370.1;locus_tag=AD08_RS29085;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_113706220.1;transl_table=11 NZ_JHDJ01000156.1 RefSeq gene 153060 153926 . - . ID=gene-AD08_RS10905;Name=AD08_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10905;old_locus_tag=AD08_2425 NZ_JHDJ01000156.1 Protein Homology CDS 153060 153926 . - 0 ID=cds-WP_032218906.1;Parent=gene-AD08_RS10905;Dbxref=Genbank:WP_032218906.1;Name=WP_032218906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707076.1;locus_tag=AD08_RS10905;product=IS3 family transposase;protein_id=WP_032218906.1;transl_table=11 ##sequence-region NZ_JHDJ01000157.1 1 25880 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000157.1 RefSeq region 1 25880 . + . ID=NZ_JHDJ01000157.1:1..25880;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000157.1 RefSeq gene 1 154 . - . ID=gene-AD08_RS10900;Name=AD08_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10900;old_locus_tag=AD08_2426;partial=true;start_range=.,1 NZ_JHDJ01000157.1 Protein Homology CDS 1 154 . - 0 ID=cds-WP_032218092.1-2;Parent=gene-AD08_RS10900;Dbxref=Genbank:WP_032218092.1;Name=WP_032218092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD08_RS10900;partial=true;product=transposase;protein_id=WP_032218092.1;start_range=.,1;transl_table=11 NZ_JHDJ01000157.1 RefSeq pseudogene 221 358 . - . ID=gene-AD08_RS31240;Name=AD08_RS31240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31240;old_locus_tag=AD08_2427;partial=true;pseudo=true;start_range=.,221 NZ_JHDJ01000157.1 Protein Homology CDS 221 358 . - 0 ID=cds-AD08_RS31240;Parent=gene-AD08_RS31240;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416612.1;locus_tag=AD08_RS31240;partial=true;product=usher protein FimD;pseudo=true;start_range=.,221;transl_table=11 NZ_JHDJ01000157.1 RefSeq gene 374 1048 . - . ID=gene-AD08_RS10895;Name=AD08_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10895;old_locus_tag=AD08_2428 NZ_JHDJ01000157.1 Protein Homology CDS 374 1048 . - 0 ID=cds-WP_000677395.1;Parent=gene-AD08_RS10895;Dbxref=Genbank:WP_000677395.1;Name=WP_000677395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310943.1;locus_tag=AD08_RS10895;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000677395.1;transl_table=11 NZ_JHDJ01000157.1 RefSeq gene 1129 1671 . - . ID=gene-AD08_RS10890;Name=AD08_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10890;old_locus_tag=AD08_2429 NZ_JHDJ01000157.1 Protein Homology CDS 1129 1671 . - 0 ID=cds-WP_032218916.1;Parent=gene-AD08_RS10890;Dbxref=Genbank:WP_032218916.1;Name=WP_032218916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707997.1;locus_tag=AD08_RS10890;product=fimbrial protein;protein_id=WP_032218916.1;transl_table=11 NZ_JHDJ01000157.1 RefSeq gene 1964 2245 . - . ID=gene-AD08_RS0126220;Name=AD08_RS0126220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126220 NZ_JHDJ01000157.1 Protein Homology CDS 1964 2245 . - 0 ID=cds-WP_032195257.1;Parent=gene-AD08_RS0126220;Dbxref=Genbank:WP_032195257.1;Name=WP_032195257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439264.1;locus_tag=AD08_RS0126220;product=YehE family protein;protein_id=WP_032195257.1;transl_table=11 NZ_JHDJ01000157.1 RefSeq gene 2508 3617 . - . ID=gene-AD08_RS10885;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=AD08_RS10885;old_locus_tag=AD08_2430 NZ_JHDJ01000157.1 Protein Homology CDS 2508 3617 . - 0 ID=cds-WP_032218918.1;Parent=gene-AD08_RS10885;Dbxref=Genbank:WP_032218918.1;Name=WP_032218918.1;gbkey=CDS;gene=apbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310946.2;locus_tag=AD08_RS10885;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_032218918.1;transl_table=11 NZ_JHDJ01000157.1 RefSeq gene 3749 5782 . + . ID=gene-AD08_RS10880;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=AD08_RS10880;old_locus_tag=AD08_2431 NZ_JHDJ01000157.1 Protein Homology CDS 3749 5782 . + 0 ID=cds-WP_032218919.1;Parent=gene-AD08_RS10880;Dbxref=Genbank:WP_032218919.1;Name=WP_032218919.1;gbkey=CDS;gene=metG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310947.1;locus_tag=AD08_RS10880;product=methionine--tRNA ligase;protein_id=WP_032218919.1;transl_table=11 NZ_JHDJ01000157.1 RefSeq gene 5923 9717 . + . ID=gene-AD08_RS10875;Name=AD08_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10875;old_locus_tag=AD08_2432 NZ_JHDJ01000157.1 Protein Homology CDS 5923 9717 . + 0 ID=cds-WP_032218921.1;Parent=gene-AD08_RS10875;Dbxref=Genbank:WP_032218921.1;Name=WP_032218921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001215568.1;locus_tag=AD08_RS10875;product=WGR and DUF4132 domain-containing protein;protein_id=WP_032218921.1;transl_table=11 NZ_JHDJ01000157.1 RefSeq gene 9727 13359 . + . ID=gene-AD08_RS10870;Name=AD08_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10870;old_locus_tag=AD08_2433 NZ_JHDJ01000157.1 Protein Homology CDS 9727 13359 . + 0 ID=cds-WP_032218923.1;Parent=gene-AD08_RS10870;Dbxref=Genbank:WP_032218923.1;Name=WP_032218923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416621.1;locus_tag=AD08_RS10870;product=DUF4132 domain-containing protein;protein_id=WP_032218923.1;transl_table=11 NZ_JHDJ01000157.1 RefSeq gene 13420 13773 . + . ID=gene-AD08_RS0126225;Name=AD08_RS0126225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126225 NZ_JHDJ01000157.1 Protein Homology CDS 13420 13773 . + 0 ID=cds-WP_032218925.1;Parent=gene-AD08_RS0126225;Dbxref=Genbank:WP_032218925.1;Name=WP_032218925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000636928.1;locus_tag=AD08_RS0126225;product=hypothetical protein;protein_id=WP_032218925.1;transl_table=11 NZ_JHDJ01000157.1 RefSeq gene 14921 16009 . + . ID=gene-AD08_RS10865;Name=AD08_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10865;old_locus_tag=AD08_2434 NZ_JHDJ01000157.1 Protein Homology CDS 14921 16009 . + 0 ID=cds-WP_001410505.1;Parent=gene-AD08_RS10865;Dbxref=Genbank:WP_001410505.1;Name=WP_001410505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310954.2;locus_tag=AD08_RS10865;product=MoxR family ATPase;protein_id=WP_001410505.1;transl_table=11 NZ_JHDJ01000157.1 RefSeq gene 16020 18299 . + . ID=gene-AD08_RS10860;Name=AD08_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10860;old_locus_tag=AD08_2435 NZ_JHDJ01000157.1 Protein Homology CDS 16020 18299 . + 0 ID=cds-WP_032218926.1;Parent=gene-AD08_RS10860;Dbxref=Genbank:WP_032218926.1;Name=WP_032218926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416624.1;locus_tag=AD08_RS10860;product=hypothetical protein;protein_id=WP_032218926.1;transl_table=11 NZ_JHDJ01000157.1 RefSeq gene 18292 19428 . + . ID=gene-AD08_RS10855;Name=AD08_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10855;old_locus_tag=AD08_2436 NZ_JHDJ01000157.1 Protein Homology CDS 18292 19428 . + 0 ID=cds-WP_001292770.1;Parent=gene-AD08_RS10855;Dbxref=Genbank:WP_001292770.1;Name=WP_001292770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416625.1;locus_tag=AD08_RS10855;product=VWA domain-containing protein;protein_id=WP_001292770.1;transl_table=11 NZ_JHDJ01000157.1 RefSeq gene 19425 21425 . + . ID=gene-AD08_RS10850;Name=AD08_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10850;old_locus_tag=AD08_2437 NZ_JHDJ01000157.1 Protein Homology CDS 19425 21425 . + 0 ID=cds-WP_032218928.1;Parent=gene-AD08_RS10850;Dbxref=Genbank:WP_032218928.1;Name=WP_032218928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001400695.1;locus_tag=AD08_RS10850;product=hypothetical protein;protein_id=WP_032218928.1;transl_table=11 NZ_JHDJ01000157.1 RefSeq gene 21550 22011 . + . ID=gene-AD08_RS10845;Name=AD08_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10845;old_locus_tag=AD08_2438 NZ_JHDJ01000157.1 Protein Homology CDS 21550 22011 . + 0 ID=cds-WP_001295429.1;Parent=gene-AD08_RS10845;Dbxref=Genbank:WP_001295429.1;Name=WP_001295429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416627.2;locus_tag=AD08_RS10845;product=YehR family lipoprotein;protein_id=WP_001295429.1;transl_table=11 NZ_JHDJ01000157.1 RefSeq gene 22051 22521 . - . ID=gene-AD08_RS10840;Name=AD08_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10840;old_locus_tag=AD08_2439 NZ_JHDJ01000157.1 Protein Homology CDS 22051 22521 . - 0 ID=cds-WP_000950409.1;Parent=gene-AD08_RS10840;Dbxref=Genbank:WP_000950409.1;Name=WP_000950409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416628.1;locus_tag=AD08_RS10840;product=DUF1456 family protein;protein_id=WP_000950409.1;transl_table=11 NZ_JHDJ01000157.1 RefSeq gene 22568 23287 . - . ID=gene-AD08_RS10835;Name=yehT;gbkey=Gene;gene=yehT;gene_biotype=protein_coding;locus_tag=AD08_RS10835;old_locus_tag=AD08_2440 NZ_JHDJ01000157.1 Protein Homology CDS 22568 23287 . - 0 ID=cds-WP_000598641.1;Parent=gene-AD08_RS10835;Dbxref=Genbank:WP_000598641.1;Name=WP_000598641.1;gbkey=CDS;gene=yehT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310963.2;locus_tag=AD08_RS10835;product=two-component system response regulator BtsR;protein_id=WP_000598641.1;transl_table=11 NZ_JHDJ01000157.1 RefSeq gene 23284 24969 . - . ID=gene-AD08_RS10830;Name=btsS;gbkey=Gene;gene=btsS;gene_biotype=protein_coding;locus_tag=AD08_RS10830;old_locus_tag=AD08_2441 NZ_JHDJ01000157.1 Protein Homology CDS 23284 24969 . - 0 ID=cds-WP_001295431.1;Parent=gene-AD08_RS10830;Dbxref=Genbank:WP_001295431.1;Name=WP_001295431.1;gbkey=CDS;gene=btsS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416630.1;locus_tag=AD08_RS10830;product=two-component regulatory system sensor histidine kinase BtsS;protein_id=WP_001295431.1;transl_table=11 NZ_JHDJ01000157.1 RefSeq pseudogene 25191 25256 . + . ID=gene-AD08_RS30555;Name=AD08_RS30555;end_range=25256,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30555;partial=true;pseudo=true NZ_JHDJ01000157.1 Protein Homology CDS 25191 25256 . + 0 ID=cds-AD08_RS30555;Parent=gene-AD08_RS30555;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=25256,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416631.1;locus_tag=AD08_RS30555;partial=true;product=MerR family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 NZ_JHDJ01000157.1 RefSeq gene 25484 25732 . + . ID=gene-AD08_RS10825;Name=AD08_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10825;old_locus_tag=AD08_2443 NZ_JHDJ01000157.1 Protein Homology CDS 25484 25732 . + 0 ID=cds-WP_016232182.1-2;Parent=gene-AD08_RS10825;Dbxref=Genbank:WP_016232182.1;Name=WP_016232182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238123.1;locus_tag=AD08_RS10825;product=DinI-like family protein;protein_id=WP_016232182.1;transl_table=11 ##sequence-region NZ_JHDJ01000158.1 1 47651 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000158.1 RefSeq region 1 47651 . + . ID=NZ_JHDJ01000158.1:1..47651;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000158.1 RefSeq gene 1 693 . + . ID=gene-AD08_RS10820;Name=AD08_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10820;old_locus_tag=AD08_2445;partial=true;start_range=.,1 NZ_JHDJ01000158.1 Protein Homology CDS 1 693 . + 0 ID=cds-WP_032218931.1;Parent=gene-AD08_RS10820;Dbxref=Genbank:WP_032218931.1;Name=WP_032218931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416861.1;locus_tag=AD08_RS10820;partial=true;product=DUF2303 family protein;protein_id=WP_032218931.1;start_range=.,1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 821 1357 . + . ID=gene-AD08_RS10815;Name=yfdR;gbkey=Gene;gene=yfdR;gene_biotype=protein_coding;locus_tag=AD08_RS10815;old_locus_tag=AD08_2446 NZ_JHDJ01000158.1 Protein Homology CDS 821 1357 . + 0 ID=cds-WP_000008178.1;Parent=gene-AD08_RS10815;Dbxref=Genbank:WP_000008178.1;Name=WP_000008178.1;gbkey=CDS;gene=yfdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416862.2;locus_tag=AD08_RS10815;product=5'-deoxynucleotidase;protein_id=WP_000008178.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 1348 1710 . + . ID=gene-AD08_RS10810;Name=AD08_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10810;old_locus_tag=AD08_2447 NZ_JHDJ01000158.1 Protein Homology CDS 1348 1710 . + 0 ID=cds-WP_001242713.1;Parent=gene-AD08_RS10810;Dbxref=Genbank:WP_001242713.1;Name=WP_001242713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001242718.1;locus_tag=AD08_RS10810;product=phage protein;protein_id=WP_001242713.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 1707 1910 . + . ID=gene-AD08_RS10805;Name=AD08_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10805;old_locus_tag=AD08_2448 NZ_JHDJ01000158.1 Protein Homology CDS 1707 1910 . + 0 ID=cds-WP_000111289.1;Parent=gene-AD08_RS10805;Dbxref=Genbank:WP_000111289.1;Name=WP_000111289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705292.1;locus_tag=AD08_RS10805;product=hypothetical protein;protein_id=WP_000111289.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 1903 2142 . + . ID=gene-AD08_RS10800;Name=AD08_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10800;old_locus_tag=AD08_2449 NZ_JHDJ01000158.1 Protein Homology CDS 1903 2142 . + 0 ID=cds-WP_032218932.1;Parent=gene-AD08_RS10800;Dbxref=Genbank:WP_032218932.1;Name=WP_032218932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000476205.1;locus_tag=AD08_RS10800;product=hypothetical protein;protein_id=WP_032218932.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 2139 2687 . + . ID=gene-AD08_RS10795;Name=AD08_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10795;old_locus_tag=AD08_2450 NZ_JHDJ01000158.1 Protein Homology CDS 2139 2687 . + 0 ID=cds-WP_021524342.1;Parent=gene-AD08_RS10795;Dbxref=Genbank:WP_021524342.1;Name=WP_021524342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065512.1;locus_tag=AD08_RS10795;product=ead/Ea22-like family protein;protein_id=WP_021524342.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq pseudogene 2689 2867 . + . ID=gene-AD08_RS31730;Name=AD08_RS31730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31730;pseudo=true NZ_JHDJ01000158.1 Protein Homology CDS 2689 2867 . + 0 ID=cds-AD08_RS31730;Parent=gene-AD08_RS31730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_305741.1;locus_tag=AD08_RS31730;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 3201 3959 . + . ID=gene-AD08_RS10785;Name=AD08_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10785;old_locus_tag=AD08_2452 NZ_JHDJ01000158.1 Protein Homology CDS 3201 3959 . + 0 ID=cds-WP_000628775.1;Parent=gene-AD08_RS10785;Dbxref=Genbank:WP_000628775.1;Name=WP_000628775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000628772.1;locus_tag=AD08_RS10785;product=phage protein;protein_id=WP_000628775.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 4044 4286 . + . ID=gene-AD08_RS0126240;Name=AD08_RS0126240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126240 NZ_JHDJ01000158.1 Protein Homology CDS 4044 4286 . + 0 ID=cds-WP_032218937.1;Parent=gene-AD08_RS0126240;Dbxref=Genbank:WP_032218937.1;Name=WP_032218937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439258.1;locus_tag=AD08_RS0126240;product=DUF4222 domain-containing protein;protein_id=WP_032218937.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 4290 4424 . + . ID=gene-AD08_RS0126245;Name=AD08_RS0126245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126245 NZ_JHDJ01000158.1 Protein Homology CDS 4290 4424 . + 0 ID=cds-WP_021524344.1;Parent=gene-AD08_RS0126245;Dbxref=Genbank:WP_021524344.1;Name=WP_021524344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502644.1;locus_tag=AD08_RS0126245;product=hypothetical protein;protein_id=WP_021524344.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 4443 4697 . + . ID=gene-AD08_RS0126250;Name=AD08_RS0126250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126250 NZ_JHDJ01000158.1 Protein Homology CDS 4443 4697 . + 0 ID=cds-WP_001193437.1;Parent=gene-AD08_RS0126250;Dbxref=Genbank:WP_001193437.1;Name=WP_001193437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311039.1;locus_tag=AD08_RS0126250;product=DUF1233 family excisionase;protein_id=WP_001193437.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 4731 6017 . + . ID=gene-AD08_RS10780;Name=AD08_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10780;old_locus_tag=AD08_2454 NZ_JHDJ01000158.1 Protein Homology CDS 4731 6017 . + 0 ID=cds-WP_000063649.1;Parent=gene-AD08_RS10780;Dbxref=Genbank:WP_000063649.1;Name=WP_000063649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311040.1;locus_tag=AD08_RS10780;product=site-specific integrase;protein_id=WP_000063649.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 6053 6739 . + . ID=gene-AD08_RS10775;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=AD08_RS10775;old_locus_tag=AD08_2455 NZ_JHDJ01000158.1 Protein Homology CDS 6053 6739 . + 0 ID=cds-WP_042101647.1;Parent=gene-AD08_RS10775;Dbxref=Genbank:WP_042101647.1;Name=WP_042101647.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416631.1;locus_tag=AD08_RS10775;product=HTH-type transcriptional regulator MlrA;protein_id=WP_042101647.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 6799 6906 . + . ID=gene-AD08_RS0126255;Name=AD08_RS0126255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126255 NZ_JHDJ01000158.1 Protein Homology CDS 6799 6906 . + 0 ID=cds-WP_001216963.1;Parent=gene-AD08_RS0126255;Dbxref=Genbank:WP_001216963.1;Name=WP_001216963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588460.1;locus_tag=AD08_RS0126255;product=protein YohO;protein_id=WP_001216963.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 6887 7618 . - . ID=gene-AD08_RS10770;Name=yehW;gbkey=Gene;gene=yehW;gene_biotype=protein_coding;locus_tag=AD08_RS10770;old_locus_tag=AD08_2456 NZ_JHDJ01000158.1 Protein Homology CDS 6887 7618 . - 0 ID=cds-WP_000783120.1;Parent=gene-AD08_RS10770;Dbxref=Genbank:WP_000783120.1;Name=WP_000783120.1;gbkey=CDS;gene=yehW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311042.1;locus_tag=AD08_RS10770;product=glycine betaine ABC transporter permease YehW;protein_id=WP_000783120.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 7623 8549 . - . ID=gene-AD08_RS10765;Name=yehX;gbkey=Gene;gene=yehX;gene_biotype=protein_coding;locus_tag=AD08_RS10765;old_locus_tag=AD08_2457 NZ_JHDJ01000158.1 Protein Homology CDS 7623 8549 . - 0 ID=cds-WP_000569357.1;Parent=gene-AD08_RS10765;Dbxref=Genbank:WP_000569357.1;Name=WP_000569357.1;gbkey=CDS;gene=yehX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416633.1;locus_tag=AD08_RS10765;product=glycine betaine ABC transporter ATP binding protein YehX;protein_id=WP_000569357.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 8542 9699 . - . ID=gene-AD08_RS10760;Name=yehY;gbkey=Gene;gene=yehY;gene_biotype=protein_coding;locus_tag=AD08_RS10760;old_locus_tag=AD08_2458 NZ_JHDJ01000158.1 Protein Homology CDS 8542 9699 . - 0 ID=cds-WP_000220833.1;Parent=gene-AD08_RS10760;Dbxref=Genbank:WP_000220833.1;Name=WP_000220833.1;gbkey=CDS;gene=yehY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416634.1;locus_tag=AD08_RS10760;product=glycine betaine ABC transporter permease YehY;protein_id=WP_000220833.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 9706 10623 . - . ID=gene-AD08_RS10755;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=AD08_RS10755;old_locus_tag=AD08_2459 NZ_JHDJ01000158.1 Protein Homology CDS 9706 10623 . - 0 ID=cds-WP_001131245.1;Parent=gene-AD08_RS10755;Dbxref=Genbank:WP_001131245.1;Name=WP_001131245.1;gbkey=CDS;gene=osmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416635.1;locus_tag=AD08_RS10755;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_001131245.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 10875 13172 . - . ID=gene-AD08_RS10750;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=AD08_RS10750;old_locus_tag=AD08_2460 NZ_JHDJ01000158.1 Protein Homology CDS 10875 13172 . - 0 ID=cds-WP_000871509.1;Parent=gene-AD08_RS10750;Dbxref=Genbank:WP_000871509.1;Name=WP_000871509.1;gbkey=CDS;gene=bglX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416636.1;locus_tag=AD08_RS10750;product=beta-glucosidase BglX;protein_id=WP_000871509.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 13368 15083 . + . ID=gene-AD08_RS10745;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=AD08_RS10745;old_locus_tag=AD08_2461 NZ_JHDJ01000158.1 Protein Homology CDS 13368 15083 . + 0 ID=cds-WP_001383375.1;Parent=gene-AD08_RS10745;Dbxref=Genbank:WP_001383375.1;Name=WP_001383375.1;gbkey=CDS;gene=dld;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311047.1;locus_tag=AD08_RS10745;product=D-lactate dehydrogenase;protein_id=WP_001383375.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 15121 16053 . - . ID=gene-AD08_RS10740;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=AD08_RS10740;old_locus_tag=AD08_2462 NZ_JHDJ01000158.1 Protein Homology CDS 15121 16053 . - 0 ID=cds-WP_001295432.1;Parent=gene-AD08_RS10740;Dbxref=Genbank:WP_001295432.1;Name=WP_001295432.1;gbkey=CDS;gene=pbpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311048.2;locus_tag=AD08_RS10740;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_001295432.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 16227 16814 . - . ID=gene-AD08_RS10735;Name=AD08_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10735;old_locus_tag=AD08_2463 NZ_JHDJ01000158.1 Protein Homology CDS 16227 16814 . - 0 ID=cds-WP_001295454.1;Parent=gene-AD08_RS10735;Dbxref=Genbank:WP_001295454.1;Name=WP_001295454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=AD08_RS10735;product=YIP1 family protein;protein_id=WP_001295454.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 16984 17562 . + . ID=gene-AD08_RS10730;Name=AD08_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10730;old_locus_tag=AD08_2464 NZ_JHDJ01000158.1 Protein Homology CDS 16984 17562 . + 0 ID=cds-WP_001296821.1;Parent=gene-AD08_RS10730;Dbxref=Genbank:WP_001296821.1;Name=WP_001296821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416640.2;locus_tag=AD08_RS10730;product=DedA family protein;protein_id=WP_001296821.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 17692 18453 . - . ID=gene-AD08_RS10725;Name=AD08_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10725;old_locus_tag=AD08_2465 NZ_JHDJ01000158.1 Protein Homology CDS 17692 18453 . - 0 ID=cds-WP_000079526.1;Parent=gene-AD08_RS10725;Dbxref=Genbank:WP_000079526.1;Name=WP_000079526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311051.1;locus_tag=AD08_RS10725;product=SDR family oxidoreductase;protein_id=WP_000079526.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 18506 20032 . - . ID=gene-AD08_RS10720;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=AD08_RS10720;old_locus_tag=AD08_2466 NZ_JHDJ01000158.1 Protein Homology CDS 18506 20032 . - 0 ID=cds-WP_122998572.1;Parent=gene-AD08_RS10720;Dbxref=Genbank:WP_122998572.1;Name=WP_122998572.1;gbkey=CDS;gene=mdtQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311052.3;locus_tag=AD08_RS10720;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_122998572.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 20166 20249 . + . ID=gene-AD08_RS0126260;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=AD08_RS0126260 NZ_JHDJ01000158.1 Protein Homology CDS 20166 20249 . + 0 ID=cds-WP_000691708.1;Parent=gene-AD08_RS0126260;Dbxref=Genbank:WP_000691708.1;Name=WP_000691708.1;gbkey=CDS;gene=yohP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233574.1;locus_tag=AD08_RS0126260;product=protein YohP;protein_id=WP_000691708.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 20637 21587 . - . ID=gene-AD08_RS10715;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=AD08_RS10715;old_locus_tag=AD08_2467 NZ_JHDJ01000158.1 Protein Homology CDS 20637 21587 . - 0 ID=cds-WP_032218947.1;Parent=gene-AD08_RS10715;Dbxref=Genbank:WP_032218947.1;Name=WP_032218947.1;gbkey=CDS;gene=dusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311053.1;locus_tag=AD08_RS10715;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_032218947.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 21826 22224 . + . ID=gene-AD08_RS10710;Name=AD08_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10710;old_locus_tag=AD08_2468 NZ_JHDJ01000158.1 Protein Homology CDS 21826 22224 . + 0 ID=cds-WP_001299855.1;Parent=gene-AD08_RS10710;Dbxref=Genbank:WP_001299855.1;Name=WP_001299855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311060.1;locus_tag=AD08_RS10710;product=CidA/LrgA family protein;protein_id=WP_001299855.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 22221 22916 . + . ID=gene-AD08_RS10705;Name=AD08_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10705;old_locus_tag=AD08_2469 NZ_JHDJ01000158.1 Protein Homology CDS 22221 22916 . + 0 ID=cds-WP_000968208.1;Parent=gene-AD08_RS10705;Dbxref=Genbank:WP_000968208.1;Name=WP_000968208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416647.1;locus_tag=AD08_RS10705;product=CidB/LrgB family autolysis modulator;protein_id=WP_000968208.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 23046 23930 . + . ID=gene-AD08_RS10700;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=AD08_RS10700;old_locus_tag=AD08_2470 NZ_JHDJ01000158.1 Protein Homology CDS 23046 23930 . + 0 ID=cds-WP_000553555.1;Parent=gene-AD08_RS10700;Dbxref=Genbank:WP_000553555.1;Name=WP_000553555.1;gbkey=CDS;gene=cdd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416648.1;locus_tag=AD08_RS10700;product=cytidine deaminase;protein_id=WP_000553555.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 24080 24799 . + . ID=gene-AD08_RS10695;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=AD08_RS10695;old_locus_tag=AD08_2471 NZ_JHDJ01000158.1 Protein Homology CDS 24080 24799 . + 0 ID=cds-WP_000920064.1;Parent=gene-AD08_RS10695;Dbxref=Genbank:WP_000920064.1;Name=WP_000920064.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311063.1;locus_tag=AD08_RS10695;product=outer membrane permeability protein SanA;protein_id=WP_000920064.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 24802 25041 . + . ID=gene-AD08_RS10690;Name=AD08_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10690;old_locus_tag=AD08_2472 NZ_JHDJ01000158.1 Protein Homology CDS 24802 25041 . + 0 ID=cds-WP_000383096.1;Parent=gene-AD08_RS10690;Dbxref=Genbank:WP_000383096.1;Name=WP_000383096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311064.1;locus_tag=AD08_RS10690;product=DUF2542 family protein;protein_id=WP_000383096.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 25235 26473 . + . ID=gene-AD08_RS10685;Name=AD08_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10685;old_locus_tag=AD08_2473 NZ_JHDJ01000158.1 Protein Homology CDS 25235 26473 . + 0 ID=cds-WP_032218939.1;Parent=gene-AD08_RS10685;Dbxref=Genbank:WP_032218939.1;Name=WP_032218939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416651.1;locus_tag=AD08_RS10685;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreT;protein_id=WP_032218939.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 26467 27702 . + . ID=gene-AD08_RS10680;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=AD08_RS10680;old_locus_tag=AD08_2474 NZ_JHDJ01000158.1 Protein Homology CDS 26467 27702 . + 0 ID=cds-WP_000956071.1;Parent=gene-AD08_RS10680;Dbxref=Genbank:WP_000956071.1;Name=WP_000956071.1;gbkey=CDS;gene=preA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416652.4;locus_tag=AD08_RS10680;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956071.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 27773 28783 . - . ID=gene-AD08_RS10675;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=AD08_RS10675;old_locus_tag=AD08_2475 NZ_JHDJ01000158.1 Protein Homology CDS 27773 28783 . - 0 ID=cds-WP_001399123.1;Parent=gene-AD08_RS10675;Dbxref=Genbank:WP_001399123.1;Name=WP_001399123.1;gbkey=CDS;gene=mglC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=AD08_RS10675;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001399123.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 28799 30319 . - . ID=gene-AD08_RS10670;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=AD08_RS10670;old_locus_tag=AD08_2476 NZ_JHDJ01000158.1 Protein Homology CDS 28799 30319 . - 0 ID=cds-WP_000255039.1;Parent=gene-AD08_RS10670;Dbxref=Genbank:WP_000255039.1;Name=WP_000255039.1;gbkey=CDS;gene=mglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416654.1;locus_tag=AD08_RS10670;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_000255039.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 30380 31378 . - . ID=gene-AD08_RS10665;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=AD08_RS10665;old_locus_tag=AD08_2477 NZ_JHDJ01000158.1 Protein Homology CDS 30380 31378 . - 0 ID=cds-WP_001036964.1;Parent=gene-AD08_RS10665;Dbxref=Genbank:WP_001036964.1;Name=WP_001036964.1;gbkey=CDS;gene=mglB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416655.1;locus_tag=AD08_RS10665;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_001036964.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 31658 32698 . - . ID=gene-AD08_RS10660;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=AD08_RS10660;old_locus_tag=AD08_2478 NZ_JHDJ01000158.1 Protein Homology CDS 31658 32698 . - 0 ID=cds-WP_000628659.1;Parent=gene-AD08_RS10660;Dbxref=Genbank:WP_000628659.1;Name=WP_000628659.1;gbkey=CDS;gene=galS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708050.2;locus_tag=AD08_RS10660;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628659.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 32840 33997 . - . ID=gene-AD08_RS10655;Name=AD08_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10655;old_locus_tag=AD08_2479 NZ_JHDJ01000158.1 Protein Homology CDS 32840 33997 . - 0 ID=cds-WP_000440894.1;Parent=gene-AD08_RS10655;Dbxref=Genbank:WP_000440894.1;Name=WP_000440894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416657.1;locus_tag=AD08_RS10655;product=DUF418 family protein;protein_id=WP_000440894.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 34014 34682 . - . ID=gene-AD08_RS10650;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AD08_RS10650;old_locus_tag=AD08_2480 NZ_JHDJ01000158.1 Protein Homology CDS 34014 34682 . - 0 ID=cds-WP_001139613.1;Parent=gene-AD08_RS10650;Dbxref=Genbank:WP_001139613.1;Name=WP_001139613.1;gbkey=CDS;gene=folE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311072.1;locus_tag=AD08_RS10650;product=GTP cyclohydrolase I FolE;protein_id=WP_001139613.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 34940 35776 . + . ID=gene-AD08_RS10645;Name=yeiG;gbkey=Gene;gene=yeiG;gene_biotype=protein_coding;locus_tag=AD08_RS10645;old_locus_tag=AD08_2481 NZ_JHDJ01000158.1 Protein Homology CDS 34940 35776 . + 0 ID=cds-WP_000425438.1;Parent=gene-AD08_RS10645;Dbxref=Genbank:WP_000425438.1;Name=WP_000425438.1;gbkey=CDS;gene=yeiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416659.1;locus_tag=AD08_RS10645;product=S-formylglutathione hydrolase;protein_id=WP_000425438.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq pseudogene 35808 37800 . - . ID=gene-AD08_RS0126275;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=pseudogene;locus_tag=AD08_RS0126275;pseudo=true NZ_JHDJ01000158.1 Protein Homology CDS 35808 37800 . - 0 ID=cds-AD08_RS0126275;Parent=gene-AD08_RS0126275;Note=frameshifted;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416660.1;locus_tag=AD08_RS0126275;product=catecholate siderophore receptor CirA;pseudo=true;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 38094 39563 . - . ID=gene-AD08_RS10640;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=AD08_RS10640;old_locus_tag=AD08_2484 NZ_JHDJ01000158.1 Protein Homology CDS 38094 39563 . - 0 ID=cds-WP_032218942.1;Parent=gene-AD08_RS10640;Dbxref=Genbank:WP_032218942.1;Name=WP_032218942.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416661.1;locus_tag=AD08_RS10640;product=lysine-specific permease;protein_id=WP_032218942.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 39768 40649 . - . ID=gene-AD08_RS10635;Name=AD08_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10635;old_locus_tag=AD08_2486 NZ_JHDJ01000158.1 Protein Homology CDS 39768 40649 . - 0 ID=cds-WP_032218944.1;Parent=gene-AD08_RS10635;Dbxref=Genbank:WP_032218944.1;Name=WP_032218944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311076.1;locus_tag=AD08_RS10635;product=LysR family transcriptional regulator;protein_id=WP_032218944.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 40748 41797 . + . ID=gene-AD08_RS10630;Name=AD08_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10630;old_locus_tag=AD08_2487 NZ_JHDJ01000158.1 Protein Homology CDS 40748 41797 . + 0 ID=cds-WP_000182053.1;Parent=gene-AD08_RS10630;Dbxref=Genbank:WP_000182053.1;Name=WP_000182053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311077.1;locus_tag=AD08_RS10630;product=YeiH family protein;protein_id=WP_000182053.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 41871 42728 . + . ID=gene-AD08_RS10625;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=AD08_RS10625;old_locus_tag=AD08_2488 NZ_JHDJ01000158.1 Protein Homology CDS 41871 42728 . + 0 ID=cds-WP_000873890.1;Parent=gene-AD08_RS10625;Dbxref=Genbank:WP_000873890.1;Name=WP_000873890.1;gbkey=CDS;gene=nfo;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311078.1;locus_tag=AD08_RS10625;product=deoxyribonuclease IV;protein_id=WP_000873890.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 42732 43820 . + . ID=gene-AD08_RS10620;Name=AD08_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10620;old_locus_tag=AD08_2489 NZ_JHDJ01000158.1 Protein Homology CDS 42732 43820 . + 0 ID=cds-WP_000999819.1;Parent=gene-AD08_RS10620;Dbxref=Genbank:WP_000999819.1;Name=WP_000999819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416665.1;locus_tag=AD08_RS10620;product=sugar kinase;protein_id=WP_000999819.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 43876 45126 . - . ID=gene-AD08_RS10615;Name=AD08_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10615;old_locus_tag=AD08_2490 NZ_JHDJ01000158.1 Protein Homology CDS 43876 45126 . - 0 ID=cds-WP_000382967.1;Parent=gene-AD08_RS10615;Dbxref=Genbank:WP_000382967.1;Name=WP_000382967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416666.1;locus_tag=AD08_RS10615;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_000382967.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 45226 46167 . - . ID=gene-AD08_RS10610;Name=rihB;gbkey=Gene;gene=rihB;gene_biotype=protein_coding;locus_tag=AD08_RS10610;old_locus_tag=AD08_2491 NZ_JHDJ01000158.1 Protein Homology CDS 45226 46167 . - 0 ID=cds-WP_032218946.1;Parent=gene-AD08_RS10610;Dbxref=Genbank:WP_032218946.1;Name=WP_032218946.1;gbkey=CDS;gene=rihB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416667.1;locus_tag=AD08_RS10610;product=ribosylpyrimidine nucleosidase;protein_id=WP_032218946.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq gene 46297 46995 . + . ID=gene-AD08_RS10605;Name=yeiL;gbkey=Gene;gene=yeiL;gene_biotype=protein_coding;locus_tag=AD08_RS10605;old_locus_tag=AD08_2492 NZ_JHDJ01000158.1 Protein Homology CDS 46297 46995 . + 0 ID=cds-WP_000658575.1;Parent=gene-AD08_RS10605;Dbxref=Genbank:WP_000658575.1;Name=WP_000658575.1;gbkey=CDS;gene=yeiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311082.4;locus_tag=AD08_RS10605;product=transcriptional regulator YeiL;protein_id=WP_000658575.1;transl_table=11 NZ_JHDJ01000158.1 RefSeq pseudogene 47063 47218 . - . ID=gene-AD08_RS29105;Name=AD08_RS29105;end_range=47218,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS29105;old_locus_tag=AD08_2493;partial=true;pseudo=true NZ_JHDJ01000158.1 Protein Homology CDS 47063 47218 . - 0 ID=cds-AD08_RS29105;Parent=gene-AD08_RS29105;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=47218,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311083.1;locus_tag=AD08_RS29105;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDJ01000158.1 RefSeq pseudogene 47275 47651 . + . ID=gene-AD08_RS0126280;Name=AD08_RS0126280;end_range=47651,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0126280;partial=true;pseudo=true NZ_JHDJ01000158.1 Protein Homology CDS 47275 47651 . + 0 ID=cds-AD08_RS0126280;Parent=gene-AD08_RS0126280;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=47651,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS0126280;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000159.1 1 255256 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000159.1 RefSeq region 1 255256 . + . ID=NZ_JHDJ01000159.1:1..255256;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000159.1 RefSeq pseudogene 1 368 . + . ID=gene-AD08_RS10600;Name=AD08_RS10600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS10600;old_locus_tag=AD08_2495;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000159.1 Protein Homology CDS 1 368 . + 2 ID=cds-AD08_RS10600;Parent=gene-AD08_RS10600;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS10600;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 625 2316 . - . ID=gene-AD08_RS10595;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=AD08_RS10595;old_locus_tag=AD08_2496 NZ_JHDJ01000159.1 Protein Homology CDS 625 2316 . - 0 ID=cds-WP_000854446.1;Parent=gene-AD08_RS10595;Dbxref=Genbank:WP_000854446.1;Name=WP_000854446.1;gbkey=CDS;gene=fruA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416672.1;locus_tag=AD08_RS10595;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854446.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 2333 3271 . - . ID=gene-AD08_RS10590;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=AD08_RS10590;old_locus_tag=AD08_2497 NZ_JHDJ01000159.1 Protein Homology CDS 2333 3271 . - 0 ID=cds-WP_000091263.1;Parent=gene-AD08_RS10590;Dbxref=Genbank:WP_000091263.1;Name=WP_000091263.1;gbkey=CDS;gene=fruK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311087.1;locus_tag=AD08_RS10590;product=1-phosphofructokinase;protein_id=WP_000091263.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 3271 4401 . - . ID=gene-AD08_RS10585;Name=AD08_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10585;old_locus_tag=AD08_2498 NZ_JHDJ01000159.1 Protein Homology CDS 3271 4401 . - 0 ID=cds-WP_000487246.1;Parent=gene-AD08_RS10585;Dbxref=Genbank:WP_000487246.1;Name=WP_000487246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311088.1;locus_tag=AD08_RS10585;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487246.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq pseudogene 4768 5949 . + . ID=gene-AD08_RS0126285;Name=setB;gbkey=Gene;gene=setB;gene_biotype=pseudogene;locus_tag=AD08_RS0126285;pseudo=true NZ_JHDJ01000159.1 Protein Homology CDS 4768 5949 . + 0 ID=cds-AD08_RS0126285;Parent=gene-AD08_RS0126285;Note=internal stop;gbkey=CDS;gene=setB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416675.1;locus_tag=AD08_RS0126285;product=sugar efflux transporter SetB;pseudo=true;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 5946 6200 . - . ID=gene-AD08_RS0126290;Name=AD08_RS0126290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126290 NZ_JHDJ01000159.1 Protein Homology CDS 5946 6200 . - 0 ID=cds-WP_000389030.1;Parent=gene-AD08_RS0126290;Dbxref=Genbank:WP_000389030.1;Name=WP_000389030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588461.1;locus_tag=AD08_RS0126290;product=YkgJ family cysteine cluster protein;protein_id=WP_000389030.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 6355 6927 . + . ID=gene-AD08_RS10580;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=AD08_RS10580;old_locus_tag=AD08_2504 NZ_JHDJ01000159.1 Protein Homology CDS 6355 6927 . + 0 ID=cds-WP_001136827.1;Parent=gene-AD08_RS10580;Dbxref=Genbank:WP_001136827.1;Name=WP_001136827.1;gbkey=CDS;gene=yeiP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=AD08_RS10580;product=elongation factor P-like protein YeiP;protein_id=WP_001136827.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 7150 8616 . + . ID=gene-AD08_RS10575;Name=AD08_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10575;old_locus_tag=AD08_2505 NZ_JHDJ01000159.1 Protein Homology CDS 7150 8616 . + 0 ID=cds-WP_001091940.1;Parent=gene-AD08_RS10575;Dbxref=Genbank:WP_001091940.1;Name=WP_001091940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416677.1;locus_tag=AD08_RS10575;product=mannitol dehydrogenase family protein;protein_id=WP_001091940.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 8734 9720 . + . ID=gene-AD08_RS10570;Name=AD08_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10570;old_locus_tag=AD08_2506 NZ_JHDJ01000159.1 Protein Homology CDS 8734 9720 . + 0 ID=cds-WP_000198828.1;Parent=gene-AD08_RS10570;Dbxref=Genbank:WP_000198828.1;Name=WP_000198828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416678.1;locus_tag=AD08_RS10570;product=zinc-binding GTPase YeiR;protein_id=WP_000198828.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 9759 10472 . + . ID=gene-AD08_RS10565;Name=lpxT;gbkey=Gene;gene=lpxT;gene_biotype=protein_coding;locus_tag=AD08_RS10565;old_locus_tag=AD08_2507 NZ_JHDJ01000159.1 Protein Homology CDS 9759 10472 . + 0 ID=cds-WP_000594599.1;Parent=gene-AD08_RS10565;Dbxref=Genbank:WP_000594599.1;Name=WP_000594599.1;gbkey=CDS;gene=lpxT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311093.2;locus_tag=AD08_RS10565;product=Kdo(2)-lipid A phosphotransferase;protein_id=WP_000594599.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 10884 11450 . + . ID=gene-AD08_RS10560;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=AD08_RS10560;old_locus_tag=AD08_2508 NZ_JHDJ01000159.1 Protein Homology CDS 10884 11450 . + 0 ID=cds-WP_000241011.1;Parent=gene-AD08_RS10560;Dbxref=Genbank:WP_000241011.1;Name=WP_000241011.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311094.1;locus_tag=AD08_RS10560;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241011.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 11631 13187 . + . ID=gene-AD08_RS10555;Name=AD08_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10555;old_locus_tag=AD08_2509 NZ_JHDJ01000159.1 Protein Homology CDS 11631 13187 . + 0 ID=cds-WP_000470594.1;Parent=gene-AD08_RS10555;Dbxref=Genbank:WP_000470594.1;Name=WP_000470594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416681.1;locus_tag=AD08_RS10555;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000470594.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 13269 15083 . + . ID=gene-AD08_RS10550;Name=AD08_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10550;old_locus_tag=AD08_2510 NZ_JHDJ01000159.1 Protein Homology CDS 13269 15083 . + 0 ID=cds-WP_000637046.1;Parent=gene-AD08_RS10550;Dbxref=Genbank:WP_000637046.1;Name=WP_000637046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416682.4;locus_tag=AD08_RS10550;product=ABC transporter substrate-binding protein;protein_id=WP_000637046.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 15084 16178 . + . ID=gene-AD08_RS10545;Name=AD08_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10545;old_locus_tag=AD08_2511 NZ_JHDJ01000159.1 Protein Homology CDS 15084 16178 . + 0 ID=cds-WP_000501604.1;Parent=gene-AD08_RS10545;Dbxref=Genbank:WP_000501604.1;Name=WP_000501604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311097.1;locus_tag=AD08_RS10545;product=microcin C ABC transporter permease YejB;protein_id=WP_000501604.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 16178 17203 . + . ID=gene-AD08_RS10540;Name=AD08_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10540;old_locus_tag=AD08_2512 NZ_JHDJ01000159.1 Protein Homology CDS 16178 17203 . + 0 ID=cds-WP_000088916.1;Parent=gene-AD08_RS10540;Dbxref=Genbank:WP_000088916.1;Name=WP_000088916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708078.1;locus_tag=AD08_RS10540;product=ABC transporter permease;protein_id=WP_000088916.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 17205 18794 . + . ID=gene-AD08_RS10535;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=AD08_RS10535;old_locus_tag=AD08_2513 NZ_JHDJ01000159.1 Protein Homology CDS 17205 18794 . + 0 ID=cds-WP_000194927.1;Parent=gene-AD08_RS10535;Dbxref=Genbank:WP_000194927.1;Name=WP_000194927.1;gbkey=CDS;gene=yejF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416685.1;locus_tag=AD08_RS10535;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_000194927.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 18798 19142 . - . ID=gene-AD08_RS10530;Name=AD08_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10530;old_locus_tag=AD08_2514 NZ_JHDJ01000159.1 Protein Homology CDS 18798 19142 . - 0 ID=cds-WP_000202798.1;Parent=gene-AD08_RS10530;Dbxref=Genbank:WP_000202798.1;Name=WP_000202798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416686.1;locus_tag=AD08_RS10530;product=hypothetical protein;protein_id=WP_000202798.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 19475 20665 . - . ID=gene-AD08_RS10525;Name=bcr;gbkey=Gene;gene=bcr;gene_biotype=protein_coding;locus_tag=AD08_RS10525;old_locus_tag=AD08_2515 NZ_JHDJ01000159.1 Protein Homology CDS 19475 20665 . - 0 ID=cds-WP_001427845.1;Parent=gene-AD08_RS10525;Dbxref=Genbank:WP_001427845.1;Name=WP_001427845.1;gbkey=CDS;gene=bcr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416687.1;locus_tag=AD08_RS10525;product=multidrug efflux MFS transporter Bcr;protein_id=WP_001427845.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 20693 21388 . - . ID=gene-AD08_RS10520;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=AD08_RS10520;old_locus_tag=AD08_2516 NZ_JHDJ01000159.1 Protein Homology CDS 20693 21388 . - 0 ID=cds-WP_001234850.1;Parent=gene-AD08_RS10520;Dbxref=Genbank:WP_001234850.1;Name=WP_001234850.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311102.1;locus_tag=AD08_RS10520;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234850.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 21537 23297 . + . ID=gene-AD08_RS10515;Name=AD08_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10515;old_locus_tag=AD08_2517 NZ_JHDJ01000159.1 Protein Homology CDS 21537 23297 . + 0 ID=cds-WP_001645487.1;Parent=gene-AD08_RS10515;Dbxref=Genbank:WP_001645487.1;Name=WP_001645487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416689.1;locus_tag=AD08_RS10515;product=DEAD/DEAH box helicase;protein_id=WP_001645487.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 23422 23706 . + . ID=gene-AD08_RS10510;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=AD08_RS10510;old_locus_tag=AD08_2518 NZ_JHDJ01000159.1 Protein Homology CDS 23422 23706 . + 0 ID=cds-WP_000494183.1;Parent=gene-AD08_RS10510;Dbxref=Genbank:WP_000494183.1;Name=WP_000494183.1;gbkey=CDS;gene=rplY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=AD08_RS10510;product=50S ribosomal protein L25;protein_id=WP_000494183.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 23845 24852 . - . ID=gene-AD08_RS10505;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=AD08_RS10505;old_locus_tag=AD08_2519 NZ_JHDJ01000159.1 Protein Homology CDS 23845 24852 . - 0 ID=cds-WP_001735462.1;Parent=gene-AD08_RS10505;Dbxref=Genbank:WP_001735462.1;Name=WP_001735462.1;gbkey=CDS;gene=yejK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416691.1;locus_tag=AD08_RS10505;product=nucleoid-associated protein YejK;protein_id=WP_001735462.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 25034 25261 . + . ID=gene-AD08_RS10500;Name=AD08_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10500;old_locus_tag=AD08_2521 NZ_JHDJ01000159.1 Protein Homology CDS 25034 25261 . + 0 ID=cds-WP_001135667.1;Parent=gene-AD08_RS10500;Dbxref=Genbank:WP_001135667.1;Name=WP_001135667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311106.1;locus_tag=AD08_RS10500;product=YejL family protein;protein_id=WP_001135667.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 25281 27041 . + . ID=gene-AD08_RS10495;Name=pbgA;gbkey=Gene;gene=pbgA;gene_biotype=protein_coding;locus_tag=AD08_RS10495;old_locus_tag=AD08_2522 NZ_JHDJ01000159.1 Protein Homology CDS 25281 27041 . + 0 ID=cds-WP_032218958.1;Parent=gene-AD08_RS10495;Dbxref=Genbank:WP_032218958.1;Name=WP_032218958.1;gbkey=CDS;gene=pbgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311107.1;locus_tag=AD08_RS10495;product=cardiolipin transport protein PbgA;protein_id=WP_032218958.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 27116 27192 . + . ID=gene-AD08_RS10490;Name=AD08_RS10490;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS10490;old_locus_tag=AD08_2523 NZ_JHDJ01000159.1 tRNAscan-SE tRNA 27116 27192 . + . ID=rna-AD08_RS10490;Parent=gene-AD08_RS10490;anticodon=(pos:27150..27152);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS10490;product=tRNA-Pro NZ_JHDJ01000159.1 tRNAscan-SE exon 27116 27192 . + . ID=exon-AD08_RS10490-1;Parent=rna-AD08_RS10490;anticodon=(pos:27150..27152);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS10490;product=tRNA-Pro NZ_JHDJ01000159.1 RefSeq gene 27402 28643 . + . ID=gene-AD08_RS10485;Name=AD08_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10485;old_locus_tag=AD08_2524 NZ_JHDJ01000159.1 Protein Homology CDS 27402 28643 . + 0 ID=cds-WP_000101915.1-2;Parent=gene-AD08_RS10485;Dbxref=Genbank:WP_000101915.1;Name=WP_000101915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101912.1;locus_tag=AD08_RS10485;product=tyrosine-type recombinase/integrase;protein_id=WP_000101915.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 28757 28999 . + . ID=gene-AD08_RS10480;Name=AD08_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10480;old_locus_tag=AD08_2525 NZ_JHDJ01000159.1 Protein Homology CDS 28757 28999 . + 0 ID=cds-WP_000262088.1;Parent=gene-AD08_RS10480;Dbxref=Genbank:WP_000262088.1;Name=WP_000262088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000262088.1;locus_tag=AD08_RS10480;product=hypothetical protein;protein_id=WP_000262088.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 29169 29375 . + . ID=gene-AD08_RS10475;Name=AD08_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10475;old_locus_tag=AD08_2527 NZ_JHDJ01000159.1 Protein Homology CDS 29169 29375 . + 0 ID=cds-WP_000452071.1;Parent=gene-AD08_RS10475;Dbxref=Genbank:WP_000452071.1;Name=WP_000452071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447941.1;locus_tag=AD08_RS10475;product=AlpA family phage regulatory protein;protein_id=WP_000452071.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 29395 30450 . + . ID=gene-AD08_RS30580;Name=AD08_RS30580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30580;old_locus_tag=AD08_2528 NZ_JHDJ01000159.1 Protein Homology CDS 29395 30450 . + 0 ID=cds-WP_077699030.1;Parent=gene-AD08_RS30580;Dbxref=Genbank:WP_077699030.1;Name=WP_077699030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001439643.1;locus_tag=AD08_RS30580;product=host cell division inhibitor Icd-like protein;protein_id=WP_077699030.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 30440 30676 . + . ID=gene-AD08_RS10470;Name=AD08_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10470;old_locus_tag=AD08_2529 NZ_JHDJ01000159.1 Protein Homology CDS 30440 30676 . + 0 ID=cds-WP_001295449.1;Parent=gene-AD08_RS10470;Dbxref=Genbank:WP_001295449.1;Name=WP_001295449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295449.1;locus_tag=AD08_RS10470;product=hypothetical protein;protein_id=WP_001295449.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 30669 30896 . + . ID=gene-AD08_RS10465;Name=AD08_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10465;old_locus_tag=AD08_2530 NZ_JHDJ01000159.1 Protein Homology CDS 30669 30896 . + 0 ID=cds-WP_000543625.1;Parent=gene-AD08_RS10465;Dbxref=Genbank:WP_000543625.1;Name=WP_000543625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000543625.1;locus_tag=AD08_RS10465;product=hypothetical protein;protein_id=WP_000543625.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 30902 31189 . + . ID=gene-AD08_RS10460;Name=AD08_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10460;old_locus_tag=AD08_2531 NZ_JHDJ01000159.1 Protein Homology CDS 30902 31189 . + 0 ID=cds-WP_032218963.1;Parent=gene-AD08_RS10460;Dbxref=Genbank:WP_032218963.1;Name=WP_032218963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005765007.1;locus_tag=AD08_RS10460;product=DUF4222 domain-containing protein;protein_id=WP_032218963.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 31186 32592 . + . ID=gene-AD08_RS10455;Name=AD08_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10455;old_locus_tag=AD08_2532 NZ_JHDJ01000159.1 Protein Homology CDS 31186 32592 . + 0 ID=cds-WP_000761813.1;Parent=gene-AD08_RS10455;Dbxref=Genbank:WP_000761813.1;Name=WP_000761813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000761813.1;locus_tag=AD08_RS10455;product=AAA family ATPase;protein_id=WP_000761813.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 32795 33046 . + . ID=gene-AD08_RS10450;Name=AD08_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10450;old_locus_tag=AD08_2533 NZ_JHDJ01000159.1 Protein Homology CDS 32795 33046 . + 0 ID=cds-WP_001485926.1;Parent=gene-AD08_RS10450;Dbxref=Genbank:WP_001485926.1;Name=WP_001485926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309613.1;locus_tag=AD08_RS10450;product=hypothetical protein;protein_id=WP_001485926.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 33043 33465 . + . ID=gene-AD08_RS10445;Name=AD08_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10445;old_locus_tag=AD08_2534 NZ_JHDJ01000159.1 Protein Homology CDS 33043 33465 . + 0 ID=cds-WP_000126631.1;Parent=gene-AD08_RS10445;Dbxref=Genbank:WP_000126631.1;Name=WP_000126631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001758993.1;locus_tag=AD08_RS10445;product=single-stranded DNA-binding protein;protein_id=WP_000126631.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 33682 34722 . + . ID=gene-AD08_RS10440;Name=AD08_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10440;old_locus_tag=AD08_2535 NZ_JHDJ01000159.1 Protein Homology CDS 33682 34722 . + 0 ID=cds-WP_000228103.1;Parent=gene-AD08_RS10440;Dbxref=Genbank:WP_000228103.1;Name=WP_000228103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230961.1;locus_tag=AD08_RS10440;product=phage capsid protein;protein_id=WP_000228103.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 34732 35073 . + . ID=gene-AD08_RS10435;Name=AD08_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10435;old_locus_tag=AD08_2536 NZ_JHDJ01000159.1 Protein Homology CDS 34732 35073 . + 0 ID=cds-WP_000190778.1;Parent=gene-AD08_RS10435;Dbxref=Genbank:WP_000190778.1;Name=WP_000190778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025240.1;locus_tag=AD08_RS10435;product=head decoration protein;protein_id=WP_000190778.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 35085 35468 . + . ID=gene-AD08_RS27370;Name=AD08_RS27370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS27370;old_locus_tag=AD08_2537 NZ_JHDJ01000159.1 Protein Homology CDS 35085 35468 . + 0 ID=cds-WP_001179421.1;Parent=gene-AD08_RS27370;Dbxref=Genbank:WP_001179421.1;Name=WP_001179421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001179421.1;locus_tag=AD08_RS27370;product=AlpA family phage regulatory protein;protein_id=WP_001179421.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 35670 36212 . + . ID=gene-AD08_RS10430;Name=AD08_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10430;old_locus_tag=AD08_2539 NZ_JHDJ01000159.1 Protein Homology CDS 35670 36212 . + 0 ID=cds-WP_021515572.1;Parent=gene-AD08_RS10430;Dbxref=Genbank:WP_021515572.1;Name=WP_021515572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000835281.1;locus_tag=AD08_RS10430;product=hypothetical protein;protein_id=WP_021515572.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 36286 36567 . + . ID=gene-AD08_RS10425;Name=AD08_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10425;old_locus_tag=AD08_2540 NZ_JHDJ01000159.1 Protein Homology CDS 36286 36567 . + 0 ID=cds-WP_000133431.1;Parent=gene-AD08_RS10425;Dbxref=Genbank:WP_000133431.1;Name=WP_000133431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309626.1;locus_tag=AD08_RS10425;product=hypothetical protein;protein_id=WP_000133431.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 37773 40364 . - . ID=gene-AD08_RS10420;Name=yejO;gbkey=Gene;gene=yejO;gene_biotype=protein_coding;locus_tag=AD08_RS10420;old_locus_tag=AD08_2542 NZ_JHDJ01000159.1 Protein Homology CDS 37773 40364 . - 0 ID=cds-WP_050436522.1;Parent=gene-AD08_RS10420;Dbxref=Genbank:WP_050436522.1;Name=WP_050436522.1;gbkey=CDS;gene=yejO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311108.2;locus_tag=AD08_RS10420;product=autotransporter YejO;protein_id=WP_050436522.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 40684 41331 . + . ID=gene-AD08_RS10415;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=AD08_RS10415;old_locus_tag=AD08_2543 NZ_JHDJ01000159.1 Protein Homology CDS 40684 41331 . + 0 ID=cds-WP_001113637.1;Parent=gene-AD08_RS10415;Dbxref=Genbank:WP_001113637.1;Name=WP_001113637.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311109.1;locus_tag=AD08_RS10415;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001113637.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 41542 42594 . - . ID=gene-AD08_RS10410;Name=AD08_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10410;old_locus_tag=AD08_2544 NZ_JHDJ01000159.1 Protein Homology CDS 41542 42594 . - 0 ID=cds-WP_032218969.1;Parent=gene-AD08_RS10410;Dbxref=Genbank:WP_032218969.1;Name=WP_032218969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416698.1;locus_tag=AD08_RS10410;product=cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH;protein_id=WP_032218969.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 42591 43148 . - . ID=gene-AD08_RS10405;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=AD08_RS10405;old_locus_tag=AD08_2545 NZ_JHDJ01000159.1 Protein Homology CDS 42591 43148 . - 0 ID=cds-WP_000824439.1;Parent=gene-AD08_RS10405;Dbxref=Genbank:WP_000824439.1;Name=WP_000824439.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311111.1;locus_tag=AD08_RS10405;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000824439.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 43145 45088 . - . ID=gene-AD08_RS10400;Name=AD08_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10400;old_locus_tag=AD08_2546 NZ_JHDJ01000159.1 Protein Homology CDS 43145 45088 . - 0 ID=cds-WP_000982447.1;Parent=gene-AD08_RS10400;Dbxref=Genbank:WP_000982447.1;Name=WP_000982447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416700.1;locus_tag=AD08_RS10400;product=cytochrome c-type biogenesis heme lyase CcmF;protein_id=WP_000982447.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 45085 45564 . - . ID=gene-AD08_RS10395;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=AD08_RS10395;old_locus_tag=AD08_2547 NZ_JHDJ01000159.1 Protein Homology CDS 45085 45564 . - 0 ID=cds-WP_001026418.1;Parent=gene-AD08_RS10395;Dbxref=Genbank:WP_001026418.1;Name=WP_001026418.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311113.1;locus_tag=AD08_RS10395;product=cytochrome c maturation protein CcmE;protein_id=WP_001026418.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 45561 45770 . - . ID=gene-AD08_RS10390;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=AD08_RS10390;old_locus_tag=AD08_2548 NZ_JHDJ01000159.1 Protein Homology CDS 45561 45770 . - 0 ID=cds-WP_000186540.1;Parent=gene-AD08_RS10390;Dbxref=Genbank:WP_000186540.1;Name=WP_000186540.1;gbkey=CDS;gene=ccmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311114.1;locus_tag=AD08_RS10390;product=heme exporter protein CcmD;protein_id=WP_000186540.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 45767 46504 . - . ID=gene-AD08_RS10385;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=AD08_RS10385;old_locus_tag=AD08_2549 NZ_JHDJ01000159.1 Protein Homology CDS 45767 46504 . - 0 ID=cds-WP_001295447.1;Parent=gene-AD08_RS10385;Dbxref=Genbank:WP_001295447.1;Name=WP_001295447.1;gbkey=CDS;gene=ccmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311115.1;locus_tag=AD08_RS10385;product=heme exporter protein CcmC;protein_id=WP_001295447.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 46546 47208 . - . ID=gene-AD08_RS10380;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=AD08_RS10380;old_locus_tag=AD08_2550 NZ_JHDJ01000159.1 Protein Homology CDS 46546 47208 . - 0 ID=cds-WP_024170406.1;Parent=gene-AD08_RS10380;Dbxref=Genbank:WP_024170406.1;Name=WP_024170406.1;gbkey=CDS;gene=ccmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311116.1;locus_tag=AD08_RS10380;product=heme exporter protein CcmB;protein_id=WP_024170406.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 47205 47822 . - . ID=gene-AD08_RS10375;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=AD08_RS10375;old_locus_tag=AD08_2551 NZ_JHDJ01000159.1 Protein Homology CDS 47205 47822 . - 0 ID=cds-WP_000888560.1;Parent=gene-AD08_RS10375;Dbxref=Genbank:WP_000888560.1;Name=WP_000888560.1;gbkey=CDS;gene=ccmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001300065.1;locus_tag=AD08_RS10375;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_000888560.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 47841 48443 . - . ID=gene-AD08_RS10370;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=AD08_RS10370;old_locus_tag=AD08_2552 NZ_JHDJ01000159.1 Protein Homology CDS 47841 48443 . - 0 ID=cds-WP_000528376.1;Parent=gene-AD08_RS10370;Dbxref=Genbank:WP_000528376.1;Name=WP_000528376.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311118.1;locus_tag=AD08_RS10370;product=cytochrome c-type protein NapC;protein_id=WP_000528376.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 48453 48902 . - . ID=gene-AD08_RS10365;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=AD08_RS10365;old_locus_tag=AD08_2553 NZ_JHDJ01000159.1 Protein Homology CDS 48453 48902 . - 0 ID=cds-WP_000835174.1;Parent=gene-AD08_RS10365;Dbxref=Genbank:WP_000835174.1;Name=WP_000835174.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311119.2;locus_tag=AD08_RS10365;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835174.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 48899 49762 . - . ID=gene-AD08_RS10360;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=AD08_RS10360;old_locus_tag=AD08_2554 NZ_JHDJ01000159.1 Protein Homology CDS 48899 49762 . - 0 ID=cds-WP_000013515.1;Parent=gene-AD08_RS10360;Dbxref=Genbank:WP_000013515.1;Name=WP_000013515.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416708.1;locus_tag=AD08_RS10360;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013515.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 49749 50444 . - . ID=gene-AD08_RS10355;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=AD08_RS10355;old_locus_tag=AD08_2555 NZ_JHDJ01000159.1 Protein Homology CDS 49749 50444 . - 0 ID=cds-WP_000091291.1;Parent=gene-AD08_RS10355;Dbxref=Genbank:WP_000091291.1;Name=WP_000091291.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416709.1;locus_tag=AD08_RS10355;product=ferredoxin-type protein NapG;protein_id=WP_000091291.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 50451 52937 . - . ID=gene-AD08_RS10350;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=AD08_RS10350;old_locus_tag=AD08_2556 NZ_JHDJ01000159.1 Protein Homology CDS 50451 52937 . - 0 ID=cds-WP_032218974.1;Parent=gene-AD08_RS10350;Dbxref=Genbank:WP_032218974.1;Name=WP_032218974.1;gbkey=CDS;gene=napA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416710.1;locus_tag=AD08_RS10350;product=periplasmic nitrate reductase subunit alpha;protein_id=WP_032218974.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 52934 53197 . - . ID=gene-AD08_RS10345;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=AD08_RS10345;old_locus_tag=AD08_2557 NZ_JHDJ01000159.1 Protein Homology CDS 52934 53197 . - 0 ID=cds-WP_000557378.1;Parent=gene-AD08_RS10345;Dbxref=Genbank:WP_000557378.1;Name=WP_000557378.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311123.1;locus_tag=AD08_RS10345;product=chaperone NapD;protein_id=WP_000557378.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 53187 53681 . - . ID=gene-AD08_RS10340;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=AD08_RS10340;old_locus_tag=AD08_2558 NZ_JHDJ01000159.1 Protein Homology CDS 53187 53681 . - 0 ID=cds-WP_000686723.1;Parent=gene-AD08_RS10340;Dbxref=Genbank:WP_000686723.1;Name=WP_000686723.1;gbkey=CDS;gene=napF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311124.1;locus_tag=AD08_RS10340;product=ferredoxin-type protein NapF;protein_id=WP_000686723.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 53790 53954 . + . ID=gene-AD08_RS10335;Name=AD08_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10335;old_locus_tag=AD08_2559 NZ_JHDJ01000159.1 GeneMarkS-2+ CDS 53790 53954 . + 0 ID=cds-WP_001310984.1;Parent=gene-AD08_RS10335;Dbxref=Genbank:WP_001310984.1;Name=WP_001310984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS10335;product=hypothetical protein;protein_id=WP_001310984.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 54089 54577 . + . ID=gene-AD08_RS10330;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=AD08_RS10330;old_locus_tag=AD08_2560 NZ_JHDJ01000159.1 Protein Homology CDS 54089 54577 . + 0 ID=cds-WP_001394510.1;Parent=gene-AD08_RS10330;Dbxref=Genbank:WP_001394510.1;Name=WP_001394510.1;gbkey=CDS;gene=eco;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416713.1;locus_tag=AD08_RS10330;product=serine protease inhibitor ecotin;protein_id=WP_001394510.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 55066 56712 . - . ID=gene-AD08_RS10325;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=AD08_RS10325;old_locus_tag=AD08_2561 NZ_JHDJ01000159.1 Protein Homology CDS 55066 56712 . - 0 ID=cds-WP_000758077.1;Parent=gene-AD08_RS10325;Dbxref=Genbank:WP_000758077.1;Name=WP_000758077.1;gbkey=CDS;gene=mqo;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416714.1;locus_tag=AD08_RS10325;product=malate dehydrogenase (quinone);protein_id=WP_000758077.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 56930 58573 . - . ID=gene-AD08_RS10320;Name=yojI;gbkey=Gene;gene=yojI;gene_biotype=protein_coding;locus_tag=AD08_RS10320;old_locus_tag=AD08_2562 NZ_JHDJ01000159.1 Protein Homology CDS 56930 58573 . - 0 ID=cds-WP_000422182.1;Parent=gene-AD08_RS10320;Dbxref=Genbank:WP_000422182.1;Name=WP_000422182.1;gbkey=CDS;gene=yojI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416715.1;locus_tag=AD08_RS10320;product=microcin J25 efflux ABC transporter YojI;protein_id=WP_000422182.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 58649 59299 . - . ID=gene-AD08_RS10315;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=AD08_RS10315;old_locus_tag=AD08_2563 NZ_JHDJ01000159.1 Protein Homology CDS 58649 59299 . - 0 ID=cds-WP_000884971.1;Parent=gene-AD08_RS10315;Dbxref=Genbank:WP_000884971.1;Name=WP_000884971.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416716.1;locus_tag=AD08_RS10315;product=DNA oxidative demethylase AlkB;protein_id=WP_000884971.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 59299 60363 . - . ID=gene-AD08_RS10310;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=AD08_RS10310;old_locus_tag=AD08_2564 NZ_JHDJ01000159.1 Protein Homology CDS 59299 60363 . - 0 ID=cds-WP_032218978.1;Parent=gene-AD08_RS10310;Dbxref=Genbank:WP_032218978.1;Name=WP_032218978.1;gbkey=CDS;gene=ada;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416717.1;locus_tag=AD08_RS10310;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_032218978.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 60437 61492 . - . ID=gene-AD08_RS10305;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=AD08_RS10305;old_locus_tag=AD08_2565 NZ_JHDJ01000159.1 Protein Homology CDS 60437 61492 . - 0 ID=cds-WP_001413565.1;Parent=gene-AD08_RS10305;Dbxref=Genbank:WP_001413565.1;Name=WP_001413565.1;gbkey=CDS;gene=apbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311130.1;locus_tag=AD08_RS10305;product=FAD:protein FMN transferase ApbE;protein_id=WP_001413565.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 61604 62707 . - . ID=gene-AD08_RS10300;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=AD08_RS10300;old_locus_tag=AD08_2566 NZ_JHDJ01000159.1 Protein Homology CDS 61604 62707 . - 0 ID=cds-WP_000865568.1;Parent=gene-AD08_RS10300;Dbxref=Genbank:WP_000865568.1;Name=WP_000865568.1;gbkey=CDS;gene=ompC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416719.1;locus_tag=AD08_RS10300;product=porin OmpC;protein_id=WP_000865568.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 63446 66118 . + . ID=gene-AD08_RS10290;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=AD08_RS10290;old_locus_tag=AD08_2568 NZ_JHDJ01000159.1 Protein Homology CDS 63446 66118 . + 0 ID=cds-WP_032218981.1;Parent=gene-AD08_RS10290;Dbxref=Genbank:WP_032218981.1;Name=WP_032218981.1;gbkey=CDS;gene=rcsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416720.1;locus_tag=AD08_RS10290;product=phosphotransferase RcsD;protein_id=WP_032218981.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 66135 66785 . + . ID=gene-AD08_RS10285;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=AD08_RS10285;old_locus_tag=AD08_2569 NZ_JHDJ01000159.1 Protein Homology CDS 66135 66785 . + 0 ID=cds-WP_001061917.1;Parent=gene-AD08_RS10285;Dbxref=Genbank:WP_001061917.1;Name=WP_001061917.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311133.1;locus_tag=AD08_RS10285;product=transcriptional regulator RcsB;protein_id=WP_001061917.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 66985 69834 . - . ID=gene-AD08_RS10280;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=AD08_RS10280;old_locus_tag=AD08_2570 NZ_JHDJ01000159.1 Protein Homology CDS 66985 69834 . - 0 ID=cds-WP_000876011.1;Parent=gene-AD08_RS10280;Dbxref=Genbank:WP_000876011.1;Name=WP_000876011.1;gbkey=CDS;gene=rcsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416722.2;locus_tag=AD08_RS10280;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876011.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 70001 71827 . + . ID=gene-AD08_RS10275;Name=atoS;gbkey=Gene;gene=atoS;gene_biotype=protein_coding;locus_tag=AD08_RS10275;old_locus_tag=AD08_2571 NZ_JHDJ01000159.1 Protein Homology CDS 70001 71827 . + 0 ID=cds-WP_032218983.1;Parent=gene-AD08_RS10275;Dbxref=Genbank:WP_032218983.1;Name=WP_032218983.1;gbkey=CDS;gene=atoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416723.1;locus_tag=AD08_RS10275;product=two-component system sensor histidine kinase AtoS;protein_id=WP_032218983.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 71824 73209 . + . ID=gene-AD08_RS10270;Name=atoC;gbkey=Gene;gene=atoC;gene_biotype=protein_coding;locus_tag=AD08_RS10270;old_locus_tag=AD08_2572 NZ_JHDJ01000159.1 Protein Homology CDS 71824 73209 . + 0 ID=cds-WP_000125282.1;Parent=gene-AD08_RS10270;Dbxref=Genbank:WP_000125282.1;Name=WP_000125282.1;gbkey=CDS;gene=atoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416724.1;locus_tag=AD08_RS10270;product=acetoacetate metabolism transcriptional regulator AtoC;protein_id=WP_000125282.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 73405 74067 . + . ID=gene-AD08_RS10265;Name=atoD;gbkey=Gene;gene=atoD;gene_biotype=protein_coding;locus_tag=AD08_RS10265;old_locus_tag=AD08_2573 NZ_JHDJ01000159.1 Protein Homology CDS 73405 74067 . + 0 ID=cds-WP_000850540.1;Parent=gene-AD08_RS10265;Dbxref=Genbank:WP_000850540.1;Name=WP_000850540.1;gbkey=CDS;gene=atoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416725.1;locus_tag=AD08_RS10265;product=acetate CoA-transferase subunit alpha;protein_id=WP_000850540.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 74067 74717 . + . ID=gene-AD08_RS10260;Name=AD08_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10260;old_locus_tag=AD08_2574 NZ_JHDJ01000159.1 Protein Homology CDS 74067 74717 . + 0 ID=cds-WP_000339065.1;Parent=gene-AD08_RS10260;Dbxref=Genbank:WP_000339065.1;Name=WP_000339065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416726.1;locus_tag=AD08_RS10260;product=acetate CoA-transferase subunit beta;protein_id=WP_000339065.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 74714 76036 . + . ID=gene-AD08_RS10255;Name=AD08_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10255;old_locus_tag=AD08_2575 NZ_JHDJ01000159.1 Protein Homology CDS 74714 76036 . + 0 ID=cds-WP_000580275.1;Parent=gene-AD08_RS10255;Dbxref=Genbank:WP_000580275.1;Name=WP_000580275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416727.1;locus_tag=AD08_RS10255;product=TIGR00366 family protein;protein_id=WP_000580275.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 76067 77251 . + . ID=gene-AD08_RS10250;Name=AD08_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10250;old_locus_tag=AD08_2576 NZ_JHDJ01000159.1 Protein Homology CDS 76067 77251 . + 0 ID=cds-WP_000786547.1;Parent=gene-AD08_RS10250;Dbxref=Genbank:WP_000786547.1;Name=WP_000786547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416728.1;locus_tag=AD08_RS10250;product=acetyl-CoA acetyltransferase;protein_id=WP_000786547.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 77325 78101 . - . ID=gene-AD08_RS10245;Name=AD08_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10245;old_locus_tag=AD08_2577 NZ_JHDJ01000159.1 Protein Homology CDS 77325 78101 . - 0 ID=cds-WP_001225852.1;Parent=gene-AD08_RS10245;Dbxref=Genbank:WP_001225852.1;Name=WP_001225852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416729.1;locus_tag=AD08_RS10245;product=YfaP family protein;protein_id=WP_001225852.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 78106 79755 . - . ID=gene-AD08_RS10240;Name=AD08_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10240;old_locus_tag=AD08_2578 NZ_JHDJ01000159.1 Protein Homology CDS 78106 79755 . - 0 ID=cds-WP_001104547.1;Parent=gene-AD08_RS10240;Dbxref=Genbank:WP_001104547.1;Name=WP_001104547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416730.1;locus_tag=AD08_RS10240;product=DUF2300 domain-containing protein;protein_id=WP_001104547.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 79756 84150 . - . ID=gene-AD08_RS10235;Name=AD08_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10235;old_locus_tag=AD08_2579 NZ_JHDJ01000159.1 Protein Homology CDS 79756 84150 . - 0 ID=cds-WP_001360244.1;Parent=gene-AD08_RS10235;Dbxref=Genbank:WP_001360244.1;Name=WP_001360244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311138.2;locus_tag=AD08_RS10235;product=alpha-2-macroglobulin family protein;protein_id=WP_001360244.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 84294 84917 . - . ID=gene-AD08_RS10230;Name=AD08_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10230;old_locus_tag=AD08_2580 NZ_JHDJ01000159.1 Protein Homology CDS 84294 84917 . - 0 ID=cds-WP_001295211.1;Parent=gene-AD08_RS10230;Dbxref=Genbank:WP_001295211.1;Name=WP_001295211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311139.2;locus_tag=AD08_RS10230;product=DUF1175 domain-containing protein;protein_id=WP_001295211.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 84914 86602 . - . ID=gene-AD08_RS10225;Name=AD08_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10225;old_locus_tag=AD08_2581 NZ_JHDJ01000159.1 Protein Homology CDS 84914 86602 . - 0 ID=cds-WP_000012305.1;Parent=gene-AD08_RS10225;Dbxref=Genbank:WP_000012305.1;Name=WP_000012305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416733.4;locus_tag=AD08_RS10225;product=DUF2138 domain-containing protein;protein_id=WP_000012305.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 86751 89378 . - . ID=gene-AD08_RS10220;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=AD08_RS10220;old_locus_tag=AD08_2582 NZ_JHDJ01000159.1 Protein Homology CDS 86751 89378 . - 0 ID=cds-WP_001281242.1;Parent=gene-AD08_RS10220;Dbxref=Genbank:WP_001281242.1;Name=WP_001281242.1;gbkey=CDS;gene=gyrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416734.1;locus_tag=AD08_RS10220;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281242.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 89525 90247 . + . ID=gene-AD08_RS10215;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=AD08_RS10215;old_locus_tag=AD08_2583 NZ_JHDJ01000159.1 Protein Homology CDS 89525 90247 . + 0 ID=cds-WP_001707209.1;Parent=gene-AD08_RS10215;Dbxref=Genbank:WP_001707209.1;Name=WP_001707209.1;gbkey=CDS;gene=ubiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416735.1;locus_tag=AD08_RS10215;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_001707209.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 90375 94127 . - . ID=gene-AD08_RS10210;Name=yfaL;gbkey=Gene;gene=yfaL;gene_biotype=protein_coding;locus_tag=AD08_RS10210;old_locus_tag=AD08_2584 NZ_JHDJ01000159.1 Protein Homology CDS 90375 94127 . - 0 ID=cds-WP_032218986.1;Parent=gene-AD08_RS10210;Dbxref=Genbank:WP_032218986.1;Name=WP_032218986.1;gbkey=CDS;gene=yfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416736.1;locus_tag=AD08_RS10210;product=AIDA-I family autotransporter adhesin YfaL/EhaC;protein_id=WP_032218986.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 94823 97108 . + . ID=gene-AD08_RS10205;Name=AD08_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10205;old_locus_tag=AD08_2585 NZ_JHDJ01000159.1 Protein Homology CDS 94823 97108 . + 0 ID=cds-WP_001075164.1;Parent=gene-AD08_RS10205;Dbxref=Genbank:WP_001075164.1;Name=WP_001075164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=AD08_RS10205;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001075164.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 97342 98472 . + . ID=gene-AD08_RS10200;Name=AD08_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10200;old_locus_tag=AD08_2586 NZ_JHDJ01000159.1 Protein Homology CDS 97342 98472 . + 0 ID=cds-WP_000332037.1;Parent=gene-AD08_RS10200;Dbxref=Genbank:WP_000332037.1;Name=WP_000332037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=AD08_RS10200;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_000332037.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 98472 98726 . + . ID=gene-AD08_RS10195;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=AD08_RS10195;old_locus_tag=AD08_2587 NZ_JHDJ01000159.1 Protein Homology CDS 98472 98726 . + 0 ID=cds-WP_000135040.1;Parent=gene-AD08_RS10195;Dbxref=Genbank:WP_000135040.1;Name=WP_000135040.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416739.1;locus_tag=AD08_RS10195;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000135040.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 98780 99430 . - . ID=gene-AD08_RS10190;Name=inaA;gbkey=Gene;gene=inaA;gene_biotype=protein_coding;locus_tag=AD08_RS10190;old_locus_tag=AD08_2588 NZ_JHDJ01000159.1 Protein Homology CDS 98780 99430 . - 0 ID=cds-WP_000301050.1;Parent=gene-AD08_RS10190;Dbxref=Genbank:WP_000301050.1;Name=WP_000301050.1;gbkey=CDS;gene=inaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416740.1;locus_tag=AD08_RS10190;product=lipopolysaccharide kinase InaA;protein_id=WP_000301050.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq pseudogene 99609 99851 . + . ID=gene-AD08_RS10185;Name=AD08_RS10185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS10185;old_locus_tag=AD08_2589;partial=true;pseudo=true;start_range=.,99609 NZ_JHDJ01000159.1 Protein Homology CDS 99609 99851 . + 0 ID=cds-AD08_RS10185;Parent=gene-AD08_RS10185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311149.1;locus_tag=AD08_RS10185;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,99609;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 99893 100969 . - . ID=gene-AD08_RS10180;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=AD08_RS10180;old_locus_tag=AD08_2590 NZ_JHDJ01000159.1 Protein Homology CDS 99893 100969 . - 0 ID=cds-WP_000779105.1;Parent=gene-AD08_RS10180;Dbxref=Genbank:WP_000779105.1;Name=WP_000779105.1;gbkey=CDS;gene=glpQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416742.1;locus_tag=AD08_RS10180;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000779105.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 100974 102332 . - . ID=gene-AD08_RS10175;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=AD08_RS10175;old_locus_tag=AD08_2591 NZ_JHDJ01000159.1 Protein Homology CDS 100974 102332 . - 0 ID=cds-WP_032218988.1;Parent=gene-AD08_RS10175;Dbxref=Genbank:WP_032218988.1;Name=WP_032218988.1;gbkey=CDS;gene=glpT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131518.1;locus_tag=AD08_RS10175;product=glycerol-3-phosphate transporter;protein_id=WP_032218988.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 102605 104233 . + . ID=gene-AD08_RS10170;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=AD08_RS10170;old_locus_tag=AD08_2592 NZ_JHDJ01000159.1 Protein Homology CDS 102605 104233 . + 0 ID=cds-WP_000857277.1;Parent=gene-AD08_RS10170;Dbxref=Genbank:WP_000857277.1;Name=WP_000857277.1;gbkey=CDS;gene=glpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311153.1;locus_tag=AD08_RS10170;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857277.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 104223 105482 . + . ID=gene-AD08_RS10165;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=AD08_RS10165;old_locus_tag=AD08_2593 NZ_JHDJ01000159.1 Protein Homology CDS 104223 105482 . + 0 ID=cds-WP_001209927.1;Parent=gene-AD08_RS10165;Dbxref=Genbank:WP_001209927.1;Name=WP_001209927.1;gbkey=CDS;gene=glpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416745.1;locus_tag=AD08_RS10165;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_001209927.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 105479 106669 . + . ID=gene-AD08_RS10160;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=AD08_RS10160;old_locus_tag=AD08_2594 NZ_JHDJ01000159.1 Protein Homology CDS 105479 106669 . + 0 ID=cds-WP_001000379.1;Parent=gene-AD08_RS10160;Dbxref=Genbank:WP_001000379.1;Name=WP_001000379.1;gbkey=CDS;gene=glpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311155.1;locus_tag=AD08_RS10160;product=anaerobic glycerol-3-phosphate dehydrogenase subunit C;protein_id=WP_001000379.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 106862 107761 . + . ID=gene-AD08_RS10155;Name=AD08_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10155;old_locus_tag=AD08_2596 NZ_JHDJ01000159.1 Protein Homology CDS 106862 107761 . + 0 ID=cds-WP_000140569.1;Parent=gene-AD08_RS10155;Dbxref=Genbank:WP_000140569.1;Name=WP_000140569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001561721.1;locus_tag=AD08_RS10155;product=ISNCY family transposase;protein_id=WP_000140569.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 107774 107959 . + . ID=gene-AD08_RS10150;Name=AD08_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10150;old_locus_tag=AD08_2597 NZ_JHDJ01000159.1 Protein Homology CDS 107774 107959 . + 0 ID=cds-WP_000150333.1;Parent=gene-AD08_RS10150;Dbxref=Genbank:WP_000150333.1;Name=WP_000150333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001357220.1;locus_tag=AD08_RS10150;product=hypothetical protein;protein_id=WP_000150333.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 108000 108803 . - . ID=gene-AD08_RS10145;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=AD08_RS10145;old_locus_tag=AD08_2598 NZ_JHDJ01000159.1 Protein Homology CDS 108000 108803 . - 0 ID=cds-WP_000992954.1;Parent=gene-AD08_RS10145;Dbxref=Genbank:WP_000992954.1;Name=WP_000992954.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416748.1;locus_tag=AD08_RS10145;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_000992954.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 108821 110110 . - . ID=gene-AD08_RS10140;Name=AD08_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10140;old_locus_tag=AD08_2599 NZ_JHDJ01000159.1 Protein Homology CDS 108821 110110 . - 0 ID=cds-WP_001295288.1;Parent=gene-AD08_RS10140;Dbxref=Genbank:WP_001295288.1;Name=WP_001295288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416749.4;locus_tag=AD08_RS10140;product=MFS transporter;protein_id=WP_001295288.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 110167 111372 . - . ID=gene-AD08_RS10135;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=AD08_RS10135;old_locus_tag=AD08_2600 NZ_JHDJ01000159.1 Protein Homology CDS 110167 111372 . - 0 ID=cds-WP_001319848.1;Parent=gene-AD08_RS10135;Dbxref=Genbank:WP_001319848.1;Name=WP_001319848.1;gbkey=CDS;gene=rhmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=AD08_RS10135;product=L-rhamnonate dehydratase;protein_id=WP_001319848.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 111387 112169 . - . ID=gene-AD08_RS10130;Name=AD08_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10130;old_locus_tag=AD08_2601 NZ_JHDJ01000159.1 Protein Homology CDS 111387 112169 . - 0 ID=cds-WP_000894185.1;Parent=gene-AD08_RS10130;Dbxref=Genbank:WP_000894185.1;Name=WP_000894185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416751.1;locus_tag=AD08_RS10130;product=IclR family transcriptional regulator;protein_id=WP_000894185.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 112389 113591 . - . ID=gene-AD08_RS10125;Name=AD08_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10125;old_locus_tag=AD08_2602 NZ_JHDJ01000159.1 Protein Homology CDS 112389 113591 . - 0 ID=cds-WP_000921621.1;Parent=gene-AD08_RS10125;Dbxref=Genbank:WP_000921621.1;Name=WP_000921621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416752.1;locus_tag=AD08_RS10125;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000921621.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 113691 114233 . - . ID=gene-AD08_RS10120;Name=AD08_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10120;old_locus_tag=AD08_2603 NZ_JHDJ01000159.1 Protein Homology CDS 113691 114233 . - 0 ID=cds-WP_032218990.1;Parent=gene-AD08_RS10120;Dbxref=Genbank:WP_032218990.1;Name=WP_032218990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416753.4;locus_tag=AD08_RS10120;product=membrane protein;protein_id=WP_032218990.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 114512 114937 . + . ID=gene-AD08_RS10115;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=AD08_RS10115;old_locus_tag=AD08_2604 NZ_JHDJ01000159.1 Protein Homology CDS 114512 114937 . + 0 ID=cds-WP_001300564.1;Parent=gene-AD08_RS10115;Dbxref=Genbank:WP_001300564.1;Name=WP_001300564.1;gbkey=CDS;gene=nudI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416754.1;locus_tag=AD08_RS10115;product=nucleoside triphosphatase NudI;protein_id=WP_001300564.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 114976 115578 . - . ID=gene-AD08_RS10110;Name=AD08_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10110;old_locus_tag=AD08_2605 NZ_JHDJ01000159.1 Protein Homology CDS 114976 115578 . - 0 ID=cds-WP_000879112.1;Parent=gene-AD08_RS10110;Dbxref=Genbank:WP_000879112.1;Name=WP_000879112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416755.1;locus_tag=AD08_RS10110;product=histidine phosphatase family protein;protein_id=WP_000879112.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 115886 117025 . + . ID=gene-AD08_RS10105;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=AD08_RS10105;old_locus_tag=AD08_2606 NZ_JHDJ01000159.1 Protein Homology CDS 115886 117025 . + 0 ID=cds-WP_001295286.1;Parent=gene-AD08_RS10105;Dbxref=Genbank:WP_001295286.1;Name=WP_001295286.1;gbkey=CDS;gene=arnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=AD08_RS10105;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_001295286.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 117029 117997 . + . ID=gene-AD08_RS10100;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=AD08_RS10100;old_locus_tag=AD08_2607 NZ_JHDJ01000159.1 Protein Homology CDS 117029 117997 . + 0 ID=cds-WP_000461657.1;Parent=gene-AD08_RS10100;Dbxref=Genbank:WP_000461657.1;Name=WP_000461657.1;gbkey=CDS;gene=arnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416757.1;locus_tag=AD08_RS10100;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000461657.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 117997 119979 . + . ID=gene-AD08_RS10095;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=AD08_RS10095;old_locus_tag=AD08_2608 NZ_JHDJ01000159.1 Protein Homology CDS 117997 119979 . + 0 ID=cds-WP_000860273.1;Parent=gene-AD08_RS10095;Dbxref=Genbank:WP_000860273.1;Name=WP_000860273.1;gbkey=CDS;gene=arnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416758.1;locus_tag=AD08_RS10095;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_000860273.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 119976 120866 . + . ID=gene-AD08_RS10090;Name=AD08_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10090;old_locus_tag=AD08_2609 NZ_JHDJ01000159.1 Protein Homology CDS 119976 120866 . + 0 ID=cds-WP_000169728.1;Parent=gene-AD08_RS10090;Dbxref=Genbank:WP_000169728.1;Name=WP_000169728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416759.1;locus_tag=AD08_RS10090;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169728.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 120866 122518 . + . ID=gene-AD08_RS10085;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=AD08_RS10085;old_locus_tag=AD08_2610 NZ_JHDJ01000159.1 Protein Homology CDS 120866 122518 . + 0 ID=cds-WP_000844057.1;Parent=gene-AD08_RS10085;Dbxref=Genbank:WP_000844057.1;Name=WP_000844057.1;gbkey=CDS;gene=arnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416760.1;locus_tag=AD08_RS10085;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_000844057.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 122515 122850 . + . ID=gene-AD08_RS10080;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=AD08_RS10080;old_locus_tag=AD08_2611 NZ_JHDJ01000159.1 Protein Homology CDS 122515 122850 . + 0 ID=cds-WP_000638031.1;Parent=gene-AD08_RS10080;Dbxref=Genbank:WP_000638031.1;Name=WP_000638031.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588462.1;locus_tag=AD08_RS10080;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000638031.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 122850 123236 . + . ID=gene-AD08_RS10075;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=AD08_RS10075;old_locus_tag=AD08_2612 NZ_JHDJ01000159.1 Protein Homology CDS 122850 123236 . + 0 ID=cds-WP_000523880.1;Parent=gene-AD08_RS10075;Dbxref=Genbank:WP_000523880.1;Name=WP_000523880.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416761.4;locus_tag=AD08_RS10075;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000523880.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 123230 123496 . - . ID=gene-AD08_RS10070;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=AD08_RS10070;old_locus_tag=AD08_2613 NZ_JHDJ01000159.1 Protein Homology CDS 123230 123496 . - 0 ID=cds-WP_001430602.1;Parent=gene-AD08_RS10070;Dbxref=Genbank:WP_001430602.1;Name=WP_001430602.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416762.2;locus_tag=AD08_RS10070;product=signal transduction protein PmrD;protein_id=WP_001430602.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 123606 124961 . - . ID=gene-AD08_RS10065;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=AD08_RS10065;old_locus_tag=AD08_2614 NZ_JHDJ01000159.1 Protein Homology CDS 123606 124961 . - 0 ID=cds-WP_000577625.1;Parent=gene-AD08_RS10065;Dbxref=Genbank:WP_000577625.1;Name=WP_000577625.1;gbkey=CDS;gene=menE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416763.1;locus_tag=AD08_RS10065;product=o-succinylbenzoate--CoA ligase;protein_id=WP_000577625.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 124958 125920 . - . ID=gene-AD08_RS10060;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=AD08_RS10060;old_locus_tag=AD08_2615 NZ_JHDJ01000159.1 Protein Homology CDS 124958 125920 . - 0 ID=cds-WP_001255628.1;Parent=gene-AD08_RS10060;Dbxref=Genbank:WP_001255628.1;Name=WP_001255628.1;gbkey=CDS;gene=menC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416764.1;locus_tag=AD08_RS10060;product=o-succinylbenzoate synthase;protein_id=WP_001255628.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 125920 126777 . - . ID=gene-AD08_RS10055;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=AD08_RS10055;old_locus_tag=AD08_2616 NZ_JHDJ01000159.1 Protein Homology CDS 125920 126777 . - 0 ID=cds-WP_000639996.1;Parent=gene-AD08_RS10055;Dbxref=Genbank:WP_000639996.1;Name=WP_000639996.1;gbkey=CDS;gene=menB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=AD08_RS10055;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000639996.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 126792 127550 . - . ID=gene-AD08_RS10050;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=AD08_RS10050;old_locus_tag=AD08_2617 NZ_JHDJ01000159.1 Protein Homology CDS 126792 127550 . - 0 ID=cds-WP_000600499.1;Parent=gene-AD08_RS10050;Dbxref=Genbank:WP_000600499.1;Name=WP_000600499.1;gbkey=CDS;gene=menH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416766.1;locus_tag=AD08_RS10050;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000600499.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 127547 129217 . - . ID=gene-AD08_RS10045;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=AD08_RS10045;old_locus_tag=AD08_2618 NZ_JHDJ01000159.1 Protein Homology CDS 127547 129217 . - 0 ID=cds-WP_001295284.1;Parent=gene-AD08_RS10045;Dbxref=Genbank:WP_001295284.1;Name=WP_001295284.1;gbkey=CDS;gene=menD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416767.1;locus_tag=AD08_RS10045;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_001295284.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 129306 130601 . - . ID=gene-AD08_RS10040;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=AD08_RS10040;old_locus_tag=AD08_2619 NZ_JHDJ01000159.1 Protein Homology CDS 129306 130601 . - 0 ID=cds-WP_001191419.1;Parent=gene-AD08_RS10040;Dbxref=Genbank:WP_001191419.1;Name=WP_001191419.1;gbkey=CDS;gene=menF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416768.4;locus_tag=AD08_RS10040;product=isochorismate synthase MenF;protein_id=WP_001191419.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 130680 130985 . - . ID=gene-AD08_RS10035;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=AD08_RS10035;old_locus_tag=AD08_2620 NZ_JHDJ01000159.1 Protein Homology CDS 130680 130985 . - 0 ID=cds-WP_000070621.1;Parent=gene-AD08_RS10035;Dbxref=Genbank:WP_000070621.1;Name=WP_000070621.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=AD08_RS10035;product=stress response protein ElaB;protein_id=WP_000070621.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 131040 131501 . - . ID=gene-AD08_RS10030;Name=AD08_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10030;old_locus_tag=AD08_2621 NZ_JHDJ01000159.1 Protein Homology CDS 131040 131501 . - 0 ID=cds-WP_000574091.1;Parent=gene-AD08_RS10030;Dbxref=Genbank:WP_000574091.1;Name=WP_000574091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416770.1;locus_tag=AD08_RS10030;product=GNAT family N-acetyltransferase;protein_id=WP_000574091.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 131566 132483 . + . ID=gene-AD08_RS10025;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=AD08_RS10025;old_locus_tag=AD08_2622 NZ_JHDJ01000159.1 Protein Homology CDS 131566 132483 . + 0 ID=cds-WP_001300687.1;Parent=gene-AD08_RS10025;Dbxref=Genbank:WP_001300687.1;Name=WP_001300687.1;gbkey=CDS;gene=rbn;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416771.4;locus_tag=AD08_RS10025;product=ribonuclease BN;protein_id=WP_001300687.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 132671 133882 . + . ID=gene-AD08_RS10020;Name=elaD;gbkey=Gene;gene=elaD;gene_biotype=protein_coding;locus_tag=AD08_RS10020;old_locus_tag=AD08_2623 NZ_JHDJ01000159.1 Protein Homology CDS 132671 133882 . + 0 ID=cds-WP_001326980.1;Parent=gene-AD08_RS10020;Dbxref=Genbank:WP_001326980.1;Name=WP_001326980.1;gbkey=CDS;gene=elaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416772.1;locus_tag=AD08_RS10020;product=deubiquitinase;protein_id=WP_001326980.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 133953 135680 . - . ID=gene-AD08_RS10015;Name=AD08_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10015;old_locus_tag=AD08_2624 NZ_JHDJ01000159.1 Protein Homology CDS 133953 135680 . - 0 ID=cds-WP_001244806.1;Parent=gene-AD08_RS10015;Dbxref=Genbank:WP_001244806.1;Name=WP_001244806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416773.1;locus_tag=AD08_RS10015;product=VWA domain-containing protein;protein_id=WP_001244806.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 135818 136789 . + . ID=gene-AD08_RS10010;Name=AD08_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10010;old_locus_tag=AD08_2625 NZ_JHDJ01000159.1 Protein Homology CDS 135818 136789 . + 0 ID=cds-WP_032218995.1;Parent=gene-AD08_RS10010;Dbxref=Genbank:WP_032218995.1;Name=WP_032218995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416774.2;locus_tag=AD08_RS10010;product=M28 family peptidase;protein_id=WP_032218995.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 136892 137395 . + . ID=gene-AD08_RS10005;Name=AD08_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10005;old_locus_tag=AD08_2626 NZ_JHDJ01000159.1 Protein Homology CDS 136892 137395 . + 0 ID=cds-WP_032218998.1;Parent=gene-AD08_RS10005;Dbxref=Genbank:WP_032218998.1;Name=WP_032218998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416775.1;locus_tag=AD08_RS10005;product=YfbM family protein;protein_id=WP_032218998.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 137668 138384 . - . ID=gene-AD08_RS10000;Name=AD08_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS10000;old_locus_tag=AD08_2627 NZ_JHDJ01000159.1 Protein Homology CDS 137668 138384 . - 0 ID=cds-WP_000455114.1;Parent=gene-AD08_RS10000;Dbxref=Genbank:WP_000455114.1;Name=WP_000455114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416776.1;locus_tag=AD08_RS10000;product=hypothetical protein;protein_id=WP_000455114.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 138593 139015 . + . ID=gene-AD08_RS09995;Name=AD08_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09995;old_locus_tag=AD08_2628 NZ_JHDJ01000159.1 Protein Homology CDS 138593 139015 . + 0 ID=cds-WP_000188051.1;Parent=gene-AD08_RS09995;Dbxref=Genbank:WP_000188051.1;Name=WP_000188051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416777.2;locus_tag=AD08_RS09995;product=hypothetical protein;protein_id=WP_000188051.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 139074 139922 . + . ID=gene-AD08_RS09990;Name=AD08_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09990;old_locus_tag=AD08_2629 NZ_JHDJ01000159.1 Protein Homology CDS 139074 139922 . + 0 ID=cds-WP_000767280.1;Parent=gene-AD08_RS09990;Dbxref=Genbank:WP_000767280.1;Name=WP_000767280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416778.2;locus_tag=AD08_RS09990;product=tetratricopeptide repeat protein;protein_id=WP_000767280.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 140006 141463 . - . ID=gene-AD08_RS09985;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=AD08_RS09985;old_locus_tag=AD08_2630 NZ_JHDJ01000159.1 Protein Homology CDS 140006 141463 . - 0 ID=cds-WP_000156701.1;Parent=gene-AD08_RS09985;Dbxref=Genbank:WP_000156701.1;Name=WP_000156701.1;gbkey=CDS;gene=nuoN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=AD08_RS09985;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156701.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 141470 142999 . - . ID=gene-AD08_RS09980;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=AD08_RS09980;old_locus_tag=AD08_2631 NZ_JHDJ01000159.1 Protein Homology CDS 141470 142999 . - 0 ID=cds-WP_000926441.1;Parent=gene-AD08_RS09980;Dbxref=Genbank:WP_000926441.1;Name=WP_000926441.1;gbkey=CDS;gene=nuoM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=AD08_RS09980;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926441.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 143163 145004 . - . ID=gene-AD08_RS09975;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=AD08_RS09975;old_locus_tag=AD08_2632 NZ_JHDJ01000159.1 Protein Homology CDS 143163 145004 . - 0 ID=cds-WP_001056643.1;Parent=gene-AD08_RS09975;Dbxref=Genbank:WP_001056643.1;Name=WP_001056643.1;gbkey=CDS;gene=nuoL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=AD08_RS09975;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056643.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 145001 145303 . - . ID=gene-AD08_RS09970;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=AD08_RS09970;old_locus_tag=AD08_2633 NZ_JHDJ01000159.1 Protein Homology CDS 145001 145303 . - 0 ID=cds-WP_000612644.1;Parent=gene-AD08_RS09970;Dbxref=Genbank:WP_000612644.1;Name=WP_000612644.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833671.1;locus_tag=AD08_RS09970;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612644.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 145300 145854 . - . ID=gene-AD08_RS09965;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=AD08_RS09965;old_locus_tag=AD08_2634 NZ_JHDJ01000159.1 Protein Homology CDS 145300 145854 . - 0 ID=cds-WP_000393511.1;Parent=gene-AD08_RS09965;Dbxref=Genbank:WP_000393511.1;Name=WP_000393511.1;gbkey=CDS;gene=nuoJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774950.1;locus_tag=AD08_RS09965;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393511.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 145866 146408 . - . ID=gene-AD08_RS09960;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=AD08_RS09960;old_locus_tag=AD08_2635 NZ_JHDJ01000159.1 Protein Homology CDS 145866 146408 . - 0 ID=cds-WP_000172749.1;Parent=gene-AD08_RS09960;Dbxref=Genbank:WP_000172749.1;Name=WP_000172749.1;gbkey=CDS;gene=nuoI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=AD08_RS09960;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172749.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 146423 147400 . - . ID=gene-AD08_RS09955;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=AD08_RS09955;old_locus_tag=AD08_2636 NZ_JHDJ01000159.1 Protein Homology CDS 146423 147400 . - 0 ID=cds-WP_000118507.1;Parent=gene-AD08_RS09955;Dbxref=Genbank:WP_000118507.1;Name=WP_000118507.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=AD08_RS09955;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118507.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 147397 150123 . - . ID=gene-AD08_RS09950;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=AD08_RS09950;old_locus_tag=AD08_2637 NZ_JHDJ01000159.1 Protein Homology CDS 147397 150123 . - 0 ID=cds-WP_032219002.1;Parent=gene-AD08_RS09950;Dbxref=Genbank:WP_032219002.1;Name=WP_032219002.1;gbkey=CDS;gene=nuoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416786.4;locus_tag=AD08_RS09950;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_032219002.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 150176 151513 . - . ID=gene-AD08_RS09945;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=AD08_RS09945;old_locus_tag=AD08_2638 NZ_JHDJ01000159.1 Protein Homology CDS 150176 151513 . - 0 ID=cds-WP_000789500.1;Parent=gene-AD08_RS09945;Dbxref=Genbank:WP_000789500.1;Name=WP_000789500.1;gbkey=CDS;gene=nuoF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416787.1;locus_tag=AD08_RS09945;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000789500.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 151510 152010 . - . ID=gene-AD08_RS09940;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=AD08_RS09940;old_locus_tag=AD08_2639 NZ_JHDJ01000159.1 Protein Homology CDS 151510 152010 . - 0 ID=cds-WP_032219006.1;Parent=gene-AD08_RS09940;Dbxref=Genbank:WP_032219006.1;Name=WP_032219006.1;gbkey=CDS;gene=nuoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124159.1;locus_tag=AD08_RS09940;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_032219006.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 152013 153815 . - . ID=gene-AD08_RS09935;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=AD08_RS09935;old_locus_tag=AD08_2640 NZ_JHDJ01000159.1 Protein Homology CDS 152013 153815 . - 0 ID=cds-WP_000247879.1;Parent=gene-AD08_RS09935;Dbxref=Genbank:WP_000247879.1;Name=WP_000247879.1;gbkey=CDS;gene=nuoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708168.1;locus_tag=AD08_RS09935;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247879.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 153909 154571 . - . ID=gene-AD08_RS09930;Name=AD08_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09930;old_locus_tag=AD08_2642 NZ_JHDJ01000159.1 Protein Homology CDS 153909 154571 . - 0 ID=cds-WP_000386733.1;Parent=gene-AD08_RS09930;Dbxref=Genbank:WP_000386733.1;Name=WP_000386733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017490251.1;locus_tag=AD08_RS09930;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386733.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 154587 155030 . - . ID=gene-AD08_RS09925;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=AD08_RS09925;old_locus_tag=AD08_2643 NZ_JHDJ01000159.1 Protein Homology CDS 154587 155030 . - 0 ID=cds-WP_024196923.1;Parent=gene-AD08_RS09925;Dbxref=Genbank:WP_024196923.1;Name=WP_024196923.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708170.1;locus_tag=AD08_RS09925;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_024196923.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 155661 156599 . - . ID=gene-AD08_RS09920;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=AD08_RS09920;old_locus_tag=AD08_2645 NZ_JHDJ01000159.1 Protein Homology CDS 155661 156599 . - 0 ID=cds-WP_000622280.1;Parent=gene-AD08_RS09920;Dbxref=Genbank:WP_000622280.1;Name=WP_000622280.1;gbkey=CDS;gene=lrhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416792.1;locus_tag=AD08_RS09920;product=transcriptional regulator LrhA;protein_id=WP_000622280.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 157519 158736 . + . ID=gene-AD08_RS09915;Name=AD08_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09915;old_locus_tag=AD08_2646 NZ_JHDJ01000159.1 Protein Homology CDS 157519 158736 . + 0 ID=cds-WP_000074527.1;Parent=gene-AD08_RS09915;Dbxref=Genbank:WP_000074527.1;Name=WP_000074527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416793.1;locus_tag=AD08_RS09915;product=alanine transaminase AlaA;protein_id=WP_000074527.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 158820 159419 . + . ID=gene-AD08_RS09910;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=AD08_RS09910;old_locus_tag=AD08_2647 NZ_JHDJ01000159.1 Protein Homology CDS 158820 159419 . + 0 ID=cds-WP_000813859.1;Parent=gene-AD08_RS09910;Dbxref=Genbank:WP_000813859.1;Name=WP_000813859.1;gbkey=CDS;gene=yfbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416794.1;locus_tag=AD08_RS09910;product=5'-deoxynucleotidase;protein_id=WP_000813859.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 159478 161310 . - . ID=gene-AD08_RS09905;Name=AD08_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09905;old_locus_tag=AD08_2648 NZ_JHDJ01000159.1 Protein Homology CDS 159478 161310 . - 0 ID=cds-WP_001012893.1;Parent=gene-AD08_RS09905;Dbxref=Genbank:WP_001012893.1;Name=WP_001012893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311203.1;locus_tag=AD08_RS09905;product=SLC13 family permease;protein_id=WP_001012893.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 161397 162047 . - . ID=gene-AD08_RS09900;Name=hxpA;gbkey=Gene;gene=hxpA;gene_biotype=protein_coding;locus_tag=AD08_RS09900;old_locus_tag=AD08_2649 NZ_JHDJ01000159.1 Protein Homology CDS 161397 162047 . - 0 ID=cds-WP_001203392.1;Parent=gene-AD08_RS09900;Dbxref=Genbank:WP_001203392.1;Name=WP_001203392.1;gbkey=CDS;gene=hxpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416796.2;locus_tag=AD08_RS09900;product=hexitol phosphatase HpxA;protein_id=WP_001203392.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 162058 162552 . - . ID=gene-AD08_RS09895;Name=AD08_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09895;old_locus_tag=AD08_2650 NZ_JHDJ01000159.1 Protein Homology CDS 162058 162552 . - 0 ID=cds-WP_032219011.1;Parent=gene-AD08_RS09895;Dbxref=Genbank:WP_032219011.1;Name=WP_032219011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=AD08_RS09895;product=YfbU family protein;protein_id=WP_032219011.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 162635 163090 . - . ID=gene-AD08_RS09890;Name=AD08_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09890;old_locus_tag=AD08_2651 NZ_JHDJ01000159.1 Protein Homology CDS 162635 163090 . - 0 ID=cds-WP_000106627.1;Parent=gene-AD08_RS09890;Dbxref=Genbank:WP_000106627.1;Name=WP_000106627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=AD08_RS09890;product=DUF412 domain-containing protein;protein_id=WP_000106627.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 163428 164630 . + . ID=gene-AD08_RS09880;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=AD08_RS09880;old_locus_tag=AD08_2653 NZ_JHDJ01000159.1 Protein Homology CDS 163428 164630 . + 0 ID=cds-WP_000095707.1;Parent=gene-AD08_RS09880;Dbxref=Genbank:WP_000095707.1;Name=WP_000095707.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=AD08_RS09880;product=acetate kinase;protein_id=WP_000095707.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 164705 166849 . + . ID=gene-AD08_RS09875;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AD08_RS09875;old_locus_tag=AD08_2654 NZ_JHDJ01000159.1 Protein Homology CDS 164705 166849 . + 0 ID=cds-WP_000086722.1;Parent=gene-AD08_RS09875;Dbxref=Genbank:WP_000086722.1;Name=WP_000086722.1;gbkey=CDS;gene=pta;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416800.1;locus_tag=AD08_RS09875;product=phosphate acetyltransferase;protein_id=WP_000086722.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 167039 168559 . + . ID=gene-AD08_RS09870;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=AD08_RS09870;old_locus_tag=AD08_2655 NZ_JHDJ01000159.1 Protein Homology CDS 167039 168559 . + 0 ID=cds-WP_032219012.1;Parent=gene-AD08_RS09870;Dbxref=Genbank:WP_032219012.1;Name=WP_032219012.1;gbkey=CDS;gene=yfcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416801.2;locus_tag=AD08_RS09870;product=putative basic amino acid antiporter YfcC;protein_id=WP_032219012.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 168592 169134 . - . ID=gene-AD08_RS09865;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=AD08_RS09865;old_locus_tag=AD08_2656 NZ_JHDJ01000159.1 Protein Homology CDS 168592 169134 . - 0 ID=cds-WP_000437935.1;Parent=gene-AD08_RS09865;Dbxref=Genbank:WP_000437935.1;Name=WP_000437935.1;gbkey=CDS;gene=yfcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311210.1;locus_tag=AD08_RS09865;product=NUDIX hydrolase YfcD;protein_id=WP_000437935.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 169192 169743 . - . ID=gene-AD08_RS09860;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=AD08_RS09860;old_locus_tag=AD08_2657 NZ_JHDJ01000159.1 Protein Homology CDS 169192 169743 . - 0 ID=cds-WP_001416625.1;Parent=gene-AD08_RS09860;Dbxref=Genbank:WP_001416625.1;Name=WP_001416625.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311211.4;locus_tag=AD08_RS09860;product=phosphodiesterase;protein_id=WP_001416625.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 169799 170443 . - . ID=gene-AD08_RS09855;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=AD08_RS09855;old_locus_tag=AD08_2658 NZ_JHDJ01000159.1 Protein Homology CDS 169799 170443 . - 0 ID=cds-WP_000042442.1;Parent=gene-AD08_RS09855;Dbxref=Genbank:WP_000042442.1;Name=WP_000042442.1;gbkey=CDS;gene=yfcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416804.1;locus_tag=AD08_RS09855;product=glutathione transferase;protein_id=WP_000042442.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 170579 171226 . + . ID=gene-AD08_RS09850;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=AD08_RS09850;old_locus_tag=AD08_2659 NZ_JHDJ01000159.1 Protein Homology CDS 170579 171226 . + 0 ID=cds-WP_000566471.1;Parent=gene-AD08_RS09850;Dbxref=Genbank:WP_000566471.1;Name=WP_000566471.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416805.1;locus_tag=AD08_RS09850;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566471.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 171283 171645 . + . ID=gene-AD08_RS09845;Name=folX;gbkey=Gene;gene=folX;gene_biotype=protein_coding;locus_tag=AD08_RS09845;old_locus_tag=AD08_2660 NZ_JHDJ01000159.1 Protein Homology CDS 171283 171645 . + 0 ID=cds-WP_000068457.1;Parent=gene-AD08_RS09845;Dbxref=Genbank:WP_000068457.1;Name=WP_000068457.1;gbkey=CDS;gene=folX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311214.1;locus_tag=AD08_RS09845;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_000068457.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 171666 172559 . + . ID=gene-AD08_RS09840;Name=AD08_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09840;old_locus_tag=AD08_2661 NZ_JHDJ01000159.1 Protein Homology CDS 171666 172559 . + 0 ID=cds-WP_001028341.1;Parent=gene-AD08_RS09840;Dbxref=Genbank:WP_001028341.1;Name=WP_001028341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416807.1;locus_tag=AD08_RS09840;product=TIGR01777 family protein;protein_id=WP_001028341.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 172607 173497 . - . ID=gene-AD08_RS09835;Name=AD08_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09835;old_locus_tag=AD08_2662 NZ_JHDJ01000159.1 Protein Homology CDS 172607 173497 . - 0 ID=cds-WP_000156149.1;Parent=gene-AD08_RS09835;Dbxref=Genbank:WP_000156149.1;Name=WP_000156149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416808.1;locus_tag=AD08_RS09835;product=recombination-promoting nuclease RpnB;protein_id=WP_000156149.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 173694 174467 . - . ID=gene-AD08_RS09830;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=AD08_RS09830;old_locus_tag=AD08_2663 NZ_JHDJ01000159.1 Protein Homology CDS 173694 174467 . - 0 ID=cds-WP_001293613.1;Parent=gene-AD08_RS09830;Dbxref=Genbank:WP_001293613.1;Name=WP_001293613.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416809.1;locus_tag=AD08_RS09830;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293613.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 174475 175191 . - . ID=gene-AD08_RS09825;Name=AD08_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09825;old_locus_tag=AD08_2664 NZ_JHDJ01000159.1 Protein Homology CDS 174475 175191 . - 0 ID=cds-WP_000569958.1;Parent=gene-AD08_RS09825;Dbxref=Genbank:WP_000569958.1;Name=WP_000569958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311218.1;locus_tag=AD08_RS09825;product=ABC transporter permease;protein_id=WP_000569958.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 175188 175874 . - . ID=gene-AD08_RS09820;Name=AD08_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09820;old_locus_tag=AD08_2665 NZ_JHDJ01000159.1 Protein Homology CDS 175188 175874 . - 0 ID=cds-WP_000965522.1;Parent=gene-AD08_RS09820;Dbxref=Genbank:WP_000965522.1;Name=WP_000965522.1;Note=The N-terminal region of this protein%2C as described by TIGR01726%2C is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits%2C which specificities that include histidine%2C arginine%2C glutamine%2C glutamate%2C L-cystine (sic)%2C the opines (in Agrobacterium) octopine and nopaline%2C etc.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416811.1;locus_tag=AD08_RS09820;product=histidine ABC transporter permease HisQ;protein_id=WP_000965522.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 175964 176746 . - . ID=gene-AD08_RS09815;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=AD08_RS09815;old_locus_tag=AD08_2666 NZ_JHDJ01000159.1 Protein Homology CDS 175964 176746 . - 0 ID=cds-WP_000737621.1;Parent=gene-AD08_RS09815;Dbxref=Genbank:WP_000737621.1;Name=WP_000737621.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311220.1;locus_tag=AD08_RS09815;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000737621.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 176967 177749 . - . ID=gene-AD08_RS09810;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=AD08_RS09810;old_locus_tag=AD08_2667 NZ_JHDJ01000159.1 Protein Homology CDS 176967 177749 . - 0 ID=cds-WP_000748271.1;Parent=gene-AD08_RS09810;Dbxref=Genbank:WP_000748271.1;Name=WP_000748271.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416813.1;locus_tag=AD08_RS09810;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000748271.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 178015 178584 . - . ID=gene-AD08_RS09805;Name=AD08_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09805;old_locus_tag=AD08_2668 NZ_JHDJ01000159.1 Protein Homology CDS 178015 178584 . - 0 ID=cds-WP_000825700.1;Parent=gene-AD08_RS09805;Dbxref=Genbank:WP_000825700.1;Name=WP_000825700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120208.1;locus_tag=AD08_RS09805;product=flavin prenyltransferase UbiX;protein_id=WP_000825700.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 178679 180196 . - . ID=gene-AD08_RS09800;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=AD08_RS09800;old_locus_tag=AD08_2669 NZ_JHDJ01000159.1 Protein Homology CDS 178679 180196 . - 0 ID=cds-WP_000334220.1;Parent=gene-AD08_RS09800;Dbxref=Genbank:WP_000334220.1;Name=WP_000334220.1;gbkey=CDS;gene=purF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=AD08_RS09800;product=amidophosphoribosyltransferase;protein_id=WP_000334220.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 180233 180721 . - . ID=gene-AD08_RS09795;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=AD08_RS09795;old_locus_tag=AD08_2670 NZ_JHDJ01000159.1 Protein Homology CDS 180233 180721 . - 0 ID=cds-WP_000262113.1;Parent=gene-AD08_RS09795;Dbxref=Genbank:WP_000262113.1;Name=WP_000262113.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311224.1;locus_tag=AD08_RS09795;product=colicin V production protein;protein_id=WP_000262113.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 180980 181642 . - . ID=gene-AD08_RS09790;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=AD08_RS09790;old_locus_tag=AD08_2671 NZ_JHDJ01000159.1 Protein Homology CDS 180980 181642 . - 0 ID=cds-WP_000146992.1;Parent=gene-AD08_RS09790;Dbxref=Genbank:WP_000146992.1;Name=WP_000146992.1;gbkey=CDS;gene=dedD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416817.2;locus_tag=AD08_RS09790;product=cell division protein DedD;protein_id=WP_000146992.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 181632 182900 . - . ID=gene-AD08_RS09785;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=AD08_RS09785;old_locus_tag=AD08_2672 NZ_JHDJ01000159.1 Protein Homology CDS 181632 182900 . - 0 ID=cds-WP_000584546.1;Parent=gene-AD08_RS09785;Dbxref=Genbank:WP_000584546.1;Name=WP_000584546.1;gbkey=CDS;gene=folC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416818.1;locus_tag=AD08_RS09785;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_000584546.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 182970 183884 . - . ID=gene-AD08_RS09780;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=AD08_RS09780;old_locus_tag=AD08_2673 NZ_JHDJ01000159.1 Protein Homology CDS 182970 183884 . - 0 ID=cds-WP_000118404.1;Parent=gene-AD08_RS09780;Dbxref=Genbank:WP_000118404.1;Name=WP_000118404.1;gbkey=CDS;gene=accD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311227.1;locus_tag=AD08_RS09780;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118404.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 184040 184699 . - . ID=gene-AD08_RS09775;Name=AD08_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09775;old_locus_tag=AD08_2674 NZ_JHDJ01000159.1 Protein Homology CDS 184040 184699 . - 0 ID=cds-WP_000364335.1;Parent=gene-AD08_RS09775;Dbxref=Genbank:WP_000364335.1;Name=WP_000364335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311228.1;locus_tag=AD08_RS09775;product=DedA family protein;protein_id=WP_000364335.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 184782 185594 . - . ID=gene-AD08_RS09770;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=AD08_RS09770;old_locus_tag=AD08_2675 NZ_JHDJ01000159.1 Protein Homology CDS 184782 185594 . - 0 ID=cds-WP_001283585.1;Parent=gene-AD08_RS09770;Dbxref=Genbank:WP_001283585.1;Name=WP_001283585.1;gbkey=CDS;gene=truA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311229.1;locus_tag=AD08_RS09770;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_001283585.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 185594 186607 . - . ID=gene-AD08_RS09765;Name=AD08_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09765;old_locus_tag=AD08_2676 NZ_JHDJ01000159.1 Protein Homology CDS 185594 186607 . - 0 ID=cds-WP_001289167.1;Parent=gene-AD08_RS09765;Dbxref=Genbank:WP_001289167.1;Name=WP_001289167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416822.1;locus_tag=AD08_RS09765;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289167.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 186673 187809 . - . ID=gene-AD08_RS09760;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=AD08_RS09760;old_locus_tag=AD08_2677 NZ_JHDJ01000159.1 Protein Homology CDS 186673 187809 . - 0 ID=cds-WP_000699145.1;Parent=gene-AD08_RS09760;Dbxref=Genbank:WP_000699145.1;Name=WP_000699145.1;gbkey=CDS;gene=pdxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416823.1;locus_tag=AD08_RS09760;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699145.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 187908 188903 . + . ID=gene-AD08_RS09755;Name=AD08_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09755;old_locus_tag=AD08_2678 NZ_JHDJ01000159.1 Protein Homology CDS 187908 188903 . + 0 ID=cds-WP_000615834.1;Parent=gene-AD08_RS09755;Dbxref=Genbank:WP_000615834.1;Name=WP_000615834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416824.1;locus_tag=AD08_RS09755;product=flagella biosynthesis regulator Flk;protein_id=WP_000615834.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 188900 190078 . - . ID=gene-AD08_RS09750;Name=AD08_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09750;old_locus_tag=AD08_2679 NZ_JHDJ01000159.1 Protein Homology CDS 188900 190078 . - 0 ID=cds-WP_000127781.1;Parent=gene-AD08_RS09750;Dbxref=Genbank:WP_000127781.1;Name=WP_000127781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416825.1;locus_tag=AD08_RS09750;product=MFS transporter;protein_id=WP_000127781.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 190343 191563 . - . ID=gene-AD08_RS09745;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=AD08_RS09745;old_locus_tag=AD08_2680 NZ_JHDJ01000159.1 Protein Homology CDS 190343 191563 . - 0 ID=cds-WP_000817178.1;Parent=gene-AD08_RS09745;Dbxref=Genbank:WP_000817178.1;Name=WP_000817178.1;gbkey=CDS;gene=fabB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416826.1;locus_tag=AD08_RS09745;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817178.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 191722 193728 . + . ID=gene-AD08_RS09740;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=AD08_RS09740;old_locus_tag=AD08_2681 NZ_JHDJ01000159.1 Protein Homology CDS 191722 193728 . + 0 ID=cds-WP_000683799.1;Parent=gene-AD08_RS09740;Dbxref=Genbank:WP_000683799.1;Name=WP_000683799.1;gbkey=CDS;gene=mnmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416827.4;locus_tag=AD08_RS09740;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_000683799.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 193849 194127 . - . ID=gene-AD08_RS09735;Name=AD08_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09735;old_locus_tag=AD08_2682 NZ_JHDJ01000159.1 Protein Homology CDS 193849 194127 . - 0 ID=cds-WP_000559764.1;Parent=gene-AD08_RS09735;Dbxref=Genbank:WP_000559764.1;Name=WP_000559764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311236.1;locus_tag=AD08_RS09735;product=YfcL family protein;protein_id=WP_000559764.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 194161 194709 . - . ID=gene-AD08_RS09730;Name=AD08_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09730;old_locus_tag=AD08_2683 NZ_JHDJ01000159.1 Protein Homology CDS 194161 194709 . - 0 ID=cds-WP_001089222.1;Parent=gene-AD08_RS09730;Dbxref=Genbank:WP_001089222.1;Name=WP_001089222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416829.1;locus_tag=AD08_RS09730;product=elongation factor P hydroxylase;protein_id=WP_001089222.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 194709 195518 . - . ID=gene-AD08_RS09725;Name=AD08_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09725;old_locus_tag=AD08_2684 NZ_JHDJ01000159.1 Protein Homology CDS 194709 195518 . - 0 ID=cds-WP_000447361.1;Parent=gene-AD08_RS09725;Dbxref=Genbank:WP_000447361.1;Name=WP_000447361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311238.1;locus_tag=AD08_RS09725;product=TSUP family transporter;protein_id=WP_000447361.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 195518 196342 . - . ID=gene-AD08_RS09720;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=AD08_RS09720;old_locus_tag=AD08_2685 NZ_JHDJ01000159.1 Protein Homology CDS 195518 196342 . - 0 ID=cds-WP_001043825.1;Parent=gene-AD08_RS09720;Dbxref=Genbank:WP_001043825.1;Name=WP_001043825.1;gbkey=CDS;gene=mepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416831.1;locus_tag=AD08_RS09720;product=penicillin-insensitive murein endopeptidase;protein_id=WP_001043825.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 196346 197431 . - . ID=gene-AD08_RS09715;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=AD08_RS09715;old_locus_tag=AD08_2686 NZ_JHDJ01000159.1 Protein Homology CDS 196346 197431 . - 0 ID=cds-WP_001333535.1;Parent=gene-AD08_RS09715;Dbxref=Genbank:WP_001333535.1;Name=WP_001333535.1;gbkey=CDS;gene=aroC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=AD08_RS09715;product=chorismate synthase;protein_id=WP_001333535.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 197466 198398 . - . ID=gene-AD08_RS09710;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=AD08_RS09710;old_locus_tag=AD08_2687 NZ_JHDJ01000159.1 Protein Homology CDS 197466 198398 . - 0 ID=cds-WP_001300582.1;Parent=gene-AD08_RS09710;Dbxref=Genbank:WP_001300582.1;Name=WP_001300582.1;gbkey=CDS;gene=prmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=AD08_RS09710;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001300582.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 198564 199115 . + . ID=gene-AD08_RS09705;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=AD08_RS09705;old_locus_tag=AD08_2688 NZ_JHDJ01000159.1 Protein Homology CDS 198564 199115 . + 0 ID=cds-WP_000730806.1;Parent=gene-AD08_RS09705;Dbxref=Genbank:WP_000730806.1;Name=WP_000730806.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416834.1;locus_tag=AD08_RS09705;product=endonuclease SmrB;protein_id=WP_000730806.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 199186 200007 . - . ID=gene-AD08_RS09700;Name=AD08_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09700;old_locus_tag=AD08_2689 NZ_JHDJ01000159.1 Protein Homology CDS 199186 200007 . - 0 ID=cds-WP_000698745.1;Parent=gene-AD08_RS09700;Dbxref=Genbank:WP_000698745.1;Name=WP_000698745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416835.2;locus_tag=AD08_RS09700;product=YfcO family protein;protein_id=WP_000698745.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 200009 200548 . - . ID=gene-AD08_RS09695;Name=AD08_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09695;old_locus_tag=AD08_2690 NZ_JHDJ01000159.1 Protein Homology CDS 200009 200548 . - 0 ID=cds-WP_001043398.1;Parent=gene-AD08_RS09695;Dbxref=Genbank:WP_001043398.1;Name=WP_001043398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416836.1;locus_tag=AD08_RS09695;product=fimbrial protein;protein_id=WP_001043398.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 200545 201033 . - . ID=gene-AD08_RS09690;Name=AD08_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09690;old_locus_tag=AD08_2691 NZ_JHDJ01000159.1 Protein Homology CDS 200545 201033 . - 0 ID=cds-WP_001232541.1;Parent=gene-AD08_RS09690;Dbxref=Genbank:WP_001232541.1;Name=WP_001232541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416837.1;locus_tag=AD08_RS09690;product=fimbrial protein;protein_id=WP_001232541.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 201030 201542 . - . ID=gene-AD08_RS09685;Name=AD08_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09685;old_locus_tag=AD08_2692 NZ_JHDJ01000159.1 Protein Homology CDS 201030 201542 . - 0 ID=cds-WP_001311011.1;Parent=gene-AD08_RS09685;Dbxref=Genbank:WP_001311011.1;Name=WP_001311011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416838.1;locus_tag=AD08_RS09685;product=fimbrial protein;protein_id=WP_001311011.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 201542 202294 . - . ID=gene-AD08_RS09680;Name=AD08_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09680;old_locus_tag=AD08_2693 NZ_JHDJ01000159.1 Protein Homology CDS 201542 202294 . - 0 ID=cds-WP_001281606.1;Parent=gene-AD08_RS09680;Dbxref=Genbank:WP_001281606.1;Name=WP_001281606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416839.1;locus_tag=AD08_RS09680;product=fimbria/pilus periplasmic chaperone;protein_id=WP_001281606.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq pseudogene 202314 204958 . - . ID=gene-AD08_RS0126325;Name=yfcU;gbkey=Gene;gene=yfcU;gene_biotype=pseudogene;locus_tag=AD08_RS0126325;pseudo=true NZ_JHDJ01000159.1 Protein Homology CDS 202314 204958 . - 0 ID=cds-AD08_RS0126325;Parent=gene-AD08_RS0126325;Note=frameshifted;gbkey=CDS;gene=yfcU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112832.1;locus_tag=AD08_RS0126325;product=fimbrial usher protein YfcU;pseudo=true;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 205040 205603 . - . ID=gene-AD08_RS09675;Name=AD08_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09675;old_locus_tag=AD08_2696 NZ_JHDJ01000159.1 Protein Homology CDS 205040 205603 . - 0 ID=cds-WP_000033316.1;Parent=gene-AD08_RS09675;Dbxref=Genbank:WP_000033316.1;Name=WP_000033316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416841.1;locus_tag=AD08_RS09675;product=type 1 fimbrial protein;protein_id=WP_000033316.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 206284 206769 . - . ID=gene-AD08_RS0126330;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=AD08_RS0126330 NZ_JHDJ01000159.1 Protein Homology CDS 206284 206769 . - 0 ID=cds-WP_001195819.1;Parent=gene-AD08_RS0126330;Dbxref=Genbank:WP_001195819.1;Name=WP_001195819.1;gbkey=CDS;gene=sixA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416842.1;locus_tag=AD08_RS0126330;product=phosphohistidine phosphatase SixA;protein_id=WP_001195819.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 206972 209116 . - . ID=gene-AD08_RS09670;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=AD08_RS09670;old_locus_tag=AD08_2699 NZ_JHDJ01000159.1 Protein Homology CDS 206972 209116 . - 0 ID=cds-WP_000426176.1;Parent=gene-AD08_RS09670;Dbxref=Genbank:WP_000426176.1;Name=WP_000426176.1;gbkey=CDS;gene=fadJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416843.1;locus_tag=AD08_RS09670;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_000426176.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 209116 210426 . - . ID=gene-AD08_RS09665;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=AD08_RS09665;old_locus_tag=AD08_2700 NZ_JHDJ01000159.1 Protein Homology CDS 209116 210426 . - 0 ID=cds-WP_032219014.1;Parent=gene-AD08_RS09665;Dbxref=Genbank:WP_032219014.1;Name=WP_032219014.1;gbkey=CDS;gene=fadI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416844.1;locus_tag=AD08_RS09665;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_032219014.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 210607 210891 . - . ID=gene-AD08_RS09660;Name=AD08_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09660;old_locus_tag=AD08_2701 NZ_JHDJ01000159.1 Protein Homology CDS 210607 210891 . - 0 ID=cds-WP_001296261.1;Parent=gene-AD08_RS09660;Dbxref=Genbank:WP_001296261.1;Name=WP_001296261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=AD08_RS09660;product=YfcZ/YiiS family protein;protein_id=WP_001296261.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 211263 212603 . + . ID=gene-AD08_RS09655;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=AD08_RS09655;old_locus_tag=AD08_2702 NZ_JHDJ01000159.1 Protein Homology CDS 211263 212603 . + 0 ID=cds-WP_001295701.1;Parent=gene-AD08_RS09655;Dbxref=Genbank:WP_001295701.1;Name=WP_001295701.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=AD08_RS09655;product=long-chain fatty acid transporter FadL;protein_id=WP_001295701.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 212969 214027 . + . ID=gene-AD08_RS09650;Name=AD08_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09650;old_locus_tag=AD08_2703 NZ_JHDJ01000159.1 Protein Homology CDS 212969 214027 . + 0 ID=cds-WP_000937788.1;Parent=gene-AD08_RS09650;Dbxref=Genbank:WP_000937788.1;Name=WP_000937788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416847.1;locus_tag=AD08_RS09650;product=hypothetical protein;protein_id=WP_000937788.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 214209 214964 . - . ID=gene-AD08_RS09645;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=AD08_RS09645;old_locus_tag=AD08_2704 NZ_JHDJ01000159.1 Protein Homology CDS 214209 214964 . - 0 ID=cds-WP_000776768.1;Parent=gene-AD08_RS09645;Dbxref=Genbank:WP_000776768.1;Name=WP_000776768.1;gbkey=CDS;gene=mlaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311256.1;locus_tag=AD08_RS09645;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776768.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 215258 216190 . + . ID=gene-AD08_RS09640;Name=AD08_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09640;old_locus_tag=AD08_2706 NZ_JHDJ01000159.1 Protein Homology CDS 215258 216190 . + 0 ID=cds-WP_032219015.1;Parent=gene-AD08_RS09640;Dbxref=Genbank:WP_032219015.1;Name=WP_032219015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416849.1;locus_tag=AD08_RS09640;product=formate/nitrite transporter family protein;protein_id=WP_032219015.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 216266 216340 . + . ID=gene-AD08_RS09635;Name=AD08_RS09635;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS09635;old_locus_tag=AD08_2707 NZ_JHDJ01000159.1 tRNAscan-SE tRNA 216266 216340 . + . ID=rna-AD08_RS09635;Parent=gene-AD08_RS09635;anticodon=(pos:216299..216301);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09635;product=tRNA-Arg NZ_JHDJ01000159.1 tRNAscan-SE exon 216266 216340 . + . ID=exon-AD08_RS09635-1;Parent=rna-AD08_RS09635;anticodon=(pos:216299..216301);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09635;product=tRNA-Arg NZ_JHDJ01000159.1 RefSeq gene 216436 217371 . - . ID=gene-AD08_RS09630;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=AD08_RS09630;old_locus_tag=AD08_2708 NZ_JHDJ01000159.1 Protein Homology CDS 216436 217371 . - 0 ID=cds-WP_001326971.1;Parent=gene-AD08_RS09630;Dbxref=Genbank:WP_001326971.1;Name=WP_001326971.1;gbkey=CDS;gene=dsdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416865.1;locus_tag=AD08_RS09630;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_001326971.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 217589 218926 . + . ID=gene-AD08_RS09625;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=AD08_RS09625;old_locus_tag=AD08_2709 NZ_JHDJ01000159.1 Protein Homology CDS 217589 218926 . + 0 ID=cds-WP_000556048.1;Parent=gene-AD08_RS09625;Dbxref=Genbank:WP_000556048.1;Name=WP_000556048.1;gbkey=CDS;gene=dsdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416866.1;locus_tag=AD08_RS09625;product=D-serine transporter DsdX;protein_id=WP_000556048.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 218944 220272 . + . ID=gene-AD08_RS09620;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=AD08_RS09620;old_locus_tag=AD08_2710 NZ_JHDJ01000159.1 Protein Homology CDS 218944 220272 . + 0 ID=cds-WP_000426427.1;Parent=gene-AD08_RS09620;Dbxref=Genbank:WP_000426427.1;Name=WP_000426427.1;gbkey=CDS;gene=dsdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416867.1;locus_tag=AD08_RS09620;product=D-serine ammonia-lyase;protein_id=WP_000426427.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 220380 221918 . - . ID=gene-AD08_RS09615;Name=emrY;gbkey=Gene;gene=emrY;gene_biotype=protein_coding;locus_tag=AD08_RS09615;old_locus_tag=AD08_2711 NZ_JHDJ01000159.1 Protein Homology CDS 220380 221918 . - 0 ID=cds-WP_001018714.1;Parent=gene-AD08_RS09615;Dbxref=Genbank:WP_001018714.1;Name=WP_001018714.1;gbkey=CDS;gene=emrY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416868.1;locus_tag=AD08_RS09615;product=multidrug efflux MFS transporter permease subunit EmrY;protein_id=WP_001018714.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 221918 223081 . - . ID=gene-AD08_RS09610;Name=emrK;gbkey=Gene;gene=emrK;gene_biotype=protein_coding;locus_tag=AD08_RS09610;old_locus_tag=AD08_2712 NZ_JHDJ01000159.1 Protein Homology CDS 221918 223081 . - 0 ID=cds-WP_000435167.1;Parent=gene-AD08_RS09610;Dbxref=Genbank:WP_000435167.1;Name=WP_000435167.1;gbkey=CDS;gene=emrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416869.1;locus_tag=AD08_RS09610;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrK;protein_id=WP_000435167.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 223497 224111 . + . ID=gene-AD08_RS09605;Name=evgA;gbkey=Gene;gene=evgA;gene_biotype=protein_coding;locus_tag=AD08_RS09605;old_locus_tag=AD08_2713 NZ_JHDJ01000159.1 Protein Homology CDS 223497 224111 . + 0 ID=cds-WP_000991370.1;Parent=gene-AD08_RS09605;Dbxref=Genbank:WP_000991370.1;Name=WP_000991370.1;gbkey=CDS;gene=evgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311275.1;locus_tag=AD08_RS09605;product=acid-sensing system DNA-binding response regulator EvgA;protein_id=WP_000991370.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 224116 227709 . + . ID=gene-AD08_RS09600;Name=evgS;gbkey=Gene;gene=evgS;gene_biotype=protein_coding;locus_tag=AD08_RS09600;old_locus_tag=AD08_2714 NZ_JHDJ01000159.1 Protein Homology CDS 224116 227709 . + 0 ID=cds-WP_001326970.1;Parent=gene-AD08_RS09600;Dbxref=Genbank:WP_001326970.1;Name=WP_001326970.1;gbkey=CDS;gene=evgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416871.1;locus_tag=AD08_RS09600;product=acid-sensing system histidine kinase EvgS;protein_id=WP_001326970.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 227765 228910 . - . ID=gene-AD08_RS09595;Name=yfdE;gbkey=Gene;gene=yfdE;gene_biotype=protein_coding;locus_tag=AD08_RS09595;old_locus_tag=AD08_2715 NZ_JHDJ01000159.1 Protein Homology CDS 227765 228910 . - 0 ID=cds-WP_001296867.1;Parent=gene-AD08_RS09595;Dbxref=Genbank:WP_001296867.1;Name=WP_001296867.1;gbkey=CDS;gene=yfdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416872.4;locus_tag=AD08_RS09595;product=CoA:oxalate CoA-transferase;protein_id=WP_001296867.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 228984 229928 . - . ID=gene-AD08_RS09590;Name=yfdV;gbkey=Gene;gene=yfdV;gene_biotype=protein_coding;locus_tag=AD08_RS09590;old_locus_tag=AD08_2716 NZ_JHDJ01000159.1 Protein Homology CDS 228984 229928 . - 0 ID=cds-WP_000955028.1;Parent=gene-AD08_RS09590;Dbxref=Genbank:WP_000955028.1;Name=WP_000955028.1;gbkey=CDS;gene=yfdV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311279.1;locus_tag=AD08_RS09590;product=transporter YfdV;protein_id=WP_000955028.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 229998 231692 . - . ID=gene-AD08_RS09585;Name=oxc;gbkey=Gene;gene=oxc;gene_biotype=protein_coding;locus_tag=AD08_RS09585;old_locus_tag=AD08_2717 NZ_JHDJ01000159.1 Protein Homology CDS 229998 231692 . - 0 ID=cds-WP_001283490.1;Parent=gene-AD08_RS09585;Dbxref=Genbank:WP_001283490.1;Name=WP_001283490.1;gbkey=CDS;gene=oxc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311280.1;locus_tag=AD08_RS09585;product=oxalyl-CoA decarboxylase;protein_id=WP_001283490.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 231746 232996 . - . ID=gene-AD08_RS09580;Name=frc;gbkey=Gene;gene=frc;gene_biotype=protein_coding;locus_tag=AD08_RS09580;old_locus_tag=AD08_2718 NZ_JHDJ01000159.1 Protein Homology CDS 231746 232996 . - 0 ID=cds-WP_000106759.1;Parent=gene-AD08_RS09580;Dbxref=Genbank:WP_000106759.1;Name=WP_000106759.1;gbkey=CDS;gene=frc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416875.1;locus_tag=AD08_RS09580;product=formyl-CoA transferase;protein_id=WP_000106759.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 233509 234144 . - . ID=gene-AD08_RS09575;Name=AD08_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09575;old_locus_tag=AD08_2719 NZ_JHDJ01000159.1 Protein Homology CDS 233509 234144 . - 0 ID=cds-WP_000825600.1;Parent=gene-AD08_RS09575;Dbxref=Genbank:WP_000825600.1;Name=WP_000825600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416876.1;locus_tag=AD08_RS09575;product=YfdX family protein;protein_id=WP_000825600.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 234440 234715 . + . ID=gene-AD08_RS0126335;Name=ypdI;gbkey=Gene;gene=ypdI;gene_biotype=protein_coding;locus_tag=AD08_RS0126335 NZ_JHDJ01000159.1 Protein Homology CDS 234440 234715 . + 0 ID=cds-WP_000867631.1;Parent=gene-AD08_RS0126335;Dbxref=Genbank:WP_000867631.1;Name=WP_000867631.1;gbkey=CDS;gene=ypdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416877.1;locus_tag=AD08_RS0126335;product=colanic acid biosynthesis lipoprotein YpdI;protein_id=WP_000867631.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 234792 235034 . - . ID=gene-AD08_RS09570;Name=AD08_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09570;old_locus_tag=AD08_2721 NZ_JHDJ01000159.1 Protein Homology CDS 234792 235034 . - 0 ID=cds-WP_000609275.1;Parent=gene-AD08_RS09570;Dbxref=Genbank:WP_000609275.1;Name=WP_000609275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416878.1;locus_tag=AD08_RS09570;product=YfdY family protein;protein_id=WP_000609275.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 235387 236307 . + . ID=gene-AD08_RS09565;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=AD08_RS09565;old_locus_tag=AD08_2722 NZ_JHDJ01000159.1 Protein Homology CDS 235387 236307 . + 0 ID=cds-WP_000484404.1;Parent=gene-AD08_RS09565;Dbxref=Genbank:WP_000484404.1;Name=WP_000484404.1;gbkey=CDS;gene=lpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311285.2;locus_tag=AD08_RS09565;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484404.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 236663 236734 . + . ID=gene-AD08_RS30610;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=AD08_RS30610 NZ_JHDJ01000159.1 Protein Homology CDS 236663 236734 . + 0 ID=cds-WP_010723117.1;Parent=gene-AD08_RS30610;Dbxref=Genbank:WP_010723117.1;Name=WP_010723117.1;gbkey=CDS;gene=ypdK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=AD08_RS30610;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 236799 238037 . - . ID=gene-AD08_RS09560;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=AD08_RS09560;old_locus_tag=AD08_2724 NZ_JHDJ01000159.1 Protein Homology CDS 236799 238037 . - 0 ID=cds-WP_000785931.1;Parent=gene-AD08_RS09560;Dbxref=Genbank:WP_000785931.1;Name=WP_000785931.1;gbkey=CDS;gene=alaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416880.1;locus_tag=AD08_RS09560;product=alanine transaminase;protein_id=WP_000785931.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 238413 240110 . + . ID=gene-AD08_RS09555;Name=AD08_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09555;old_locus_tag=AD08_2725 NZ_JHDJ01000159.1 Protein Homology CDS 238413 240110 . + 0 ID=cds-WP_000544359.1;Parent=gene-AD08_RS09555;Dbxref=Genbank:WP_000544359.1;Name=WP_000544359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311287.1;locus_tag=AD08_RS09555;product=two-component system sensor histidine kinase YpdA;protein_id=WP_000544359.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 240125 240859 . + . ID=gene-AD08_RS09550;Name=AD08_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09550;old_locus_tag=AD08_2726 NZ_JHDJ01000159.1 Protein Homology CDS 240125 240859 . + 0 ID=cds-WP_001295458.1;Parent=gene-AD08_RS09550;Dbxref=Genbank:WP_001295458.1;Name=WP_001295458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311288.1;locus_tag=AD08_RS09550;product=two-component system response regulator YpdB;protein_id=WP_001295458.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 240872 241729 . + . ID=gene-AD08_RS09545;Name=AD08_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09545;old_locus_tag=AD08_2727 NZ_JHDJ01000159.1 Protein Homology CDS 240872 241729 . + 0 ID=cds-WP_000646835.1;Parent=gene-AD08_RS09545;Dbxref=Genbank:WP_000646835.1;Name=WP_000646835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416883.1;locus_tag=AD08_RS09545;product=AraC family transcriptional regulator;protein_id=WP_000646835.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 241732 244227 . - . ID=gene-AD08_RS09540;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AD08_RS09540;old_locus_tag=AD08_2728 NZ_JHDJ01000159.1 Protein Homology CDS 241732 244227 . - 0 ID=cds-WP_000955906.1;Parent=gene-AD08_RS09540;Dbxref=Genbank:WP_000955906.1;Name=WP_000955906.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416884.1;locus_tag=AD08_RS09540;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000955906.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 244252 245289 . - . ID=gene-AD08_RS09535;Name=ypdE;gbkey=Gene;gene=ypdE;gene_biotype=protein_coding;locus_tag=AD08_RS09535;old_locus_tag=AD08_2729 NZ_JHDJ01000159.1 Protein Homology CDS 244252 245289 . - 0 ID=cds-WP_000366028.1;Parent=gene-AD08_RS09535;Dbxref=Genbank:WP_000366028.1;Name=WP_000366028.1;gbkey=CDS;gene=ypdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416885.1;locus_tag=AD08_RS09535;product=aminopeptidase;protein_id=WP_000366028.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 245289 246374 . - . ID=gene-AD08_RS09530;Name=ypdF;gbkey=Gene;gene=ypdF;gene_biotype=protein_coding;locus_tag=AD08_RS09530;old_locus_tag=AD08_2730 NZ_JHDJ01000159.1 Protein Homology CDS 245289 246374 . - 0 ID=cds-WP_000173291.1;Parent=gene-AD08_RS09530;Dbxref=Genbank:WP_000173291.1;Name=WP_000173291.1;gbkey=CDS;gene=ypdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416886.1;locus_tag=AD08_RS09530;product=aminopeptidase;protein_id=WP_000173291.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 246389 247636 . - . ID=gene-AD08_RS09525;Name=AD08_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09525;old_locus_tag=AD08_2731 NZ_JHDJ01000159.1 Protein Homology CDS 246389 247636 . - 0 ID=cds-WP_000985359.1;Parent=gene-AD08_RS09525;Dbxref=Genbank:WP_000985359.1;Name=WP_000985359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416887.1;locus_tag=AD08_RS09525;product=PTS fructose transporter subunit IIC;protein_id=WP_000985359.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 247658 247984 . - . ID=gene-AD08_RS09520;Name=AD08_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09520;old_locus_tag=AD08_2732 NZ_JHDJ01000159.1 Protein Homology CDS 247658 247984 . - 0 ID=cds-WP_000038456.1;Parent=gene-AD08_RS09520;Dbxref=Genbank:WP_000038456.1;Name=WP_000038456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311294.1;locus_tag=AD08_RS09520;product=fructose-like phosphotransferase enzyme IIB component 1;protein_id=WP_000038456.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 248203 249168 . - . ID=gene-AD08_RS09515;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=AD08_RS09515;old_locus_tag=AD08_2733 NZ_JHDJ01000159.1 Protein Homology CDS 248203 249168 . - 0 ID=cds-WP_000170346.1;Parent=gene-AD08_RS09515;Dbxref=Genbank:WP_000170346.1;Name=WP_000170346.1;gbkey=CDS;gene=glk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311295.1;locus_tag=AD08_RS09515;product=glucokinase;protein_id=WP_000170346.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 249372 250628 . + . ID=gene-AD08_RS09510;Name=AD08_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09510;old_locus_tag=AD08_2734 NZ_JHDJ01000159.1 Protein Homology CDS 249372 250628 . + 0 ID=cds-WP_001403744.1;Parent=gene-AD08_RS09510;Dbxref=Genbank:WP_001403744.1;Name=WP_001403744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311296.1;locus_tag=AD08_RS09510;product=ion channel protein;protein_id=WP_001403744.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 250743 251069 . + . ID=gene-AD08_RS09505;Name=AD08_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09505;old_locus_tag=AD08_2735 NZ_JHDJ01000159.1 Protein Homology CDS 250743 251069 . + 0 ID=cds-WP_000490072.1;Parent=gene-AD08_RS09505;Dbxref=Genbank:WP_000490072.1;Name=WP_000490072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311297.1;locus_tag=AD08_RS09505;product=DUF2502 domain-containing protein;protein_id=WP_000490072.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 251210 252448 . - . ID=gene-AD08_RS09500;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;locus_tag=AD08_RS09500;old_locus_tag=AD08_2736 NZ_JHDJ01000159.1 Protein Homology CDS 251210 252448 . - 0 ID=cds-WP_032219017.1;Parent=gene-AD08_RS09500;Dbxref=Genbank:WP_032219017.1;Name=WP_032219017.1;gbkey=CDS;gene=mntH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311298.1;locus_tag=AD08_RS09500;product=Mn(2+) uptake NRAMP transporter MntH;protein_id=WP_032219017.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 252784 253986 . + . ID=gene-AD08_RS09495;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=AD08_RS09495;old_locus_tag=AD08_2737 NZ_JHDJ01000159.1 Protein Homology CDS 252784 253986 . + 0 ID=cds-WP_000376337.1;Parent=gene-AD08_RS09495;Dbxref=Genbank:WP_000376337.1;Name=WP_000376337.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416894.1;locus_tag=AD08_RS09495;product=nucleoside permease NupC;protein_id=WP_000376337.1;transl_table=11 NZ_JHDJ01000159.1 RefSeq gene 254189 255256 . - . ID=gene-AD08_RS09490;Name=AD08_RS09490;end_range=255256,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09490;old_locus_tag=AD08_2738;partial=true NZ_JHDJ01000159.1 Protein Homology CDS 254189 255256 . - 0 ID=cds-WP_032218773.1-2;Parent=gene-AD08_RS09490;Dbxref=Genbank:WP_032218773.1;Name=WP_032218773.1;end_range=255256,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS09490;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032218773.1;transl_table=11 ##sequence-region NZ_JHDJ01000160.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000160.1 RefSeq region 1 2047 . + . ID=NZ_JHDJ01000160.1:1..2047;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000160.1 RefSeq gene 1 348 . - . ID=gene-AD08_RS09485;Name=AD08_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09485;old_locus_tag=AD08_2739;partial=true;start_range=.,1 NZ_JHDJ01000160.1 Protein Homology CDS 1 348 . - 0 ID=cds-WP_001467393.1;Parent=gene-AD08_RS09485;Dbxref=Genbank:WP_001467393.1;Name=WP_001467393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311300.1;locus_tag=AD08_RS09485;partial=true;product=MASE1 family protein;protein_id=WP_001467393.1;start_range=.,1;transl_table=11 NZ_JHDJ01000160.1 RefSeq gene 557 632 . - . ID=gene-AD08_RS09480;Name=AD08_RS09480;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS09480;old_locus_tag=AD08_2740 NZ_JHDJ01000160.1 tRNAscan-SE tRNA 557 632 . - . ID=rna-AD08_RS09480;Parent=gene-AD08_RS09480;anticodon=(pos:complement(597..599));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09480;product=tRNA-Ala NZ_JHDJ01000160.1 tRNAscan-SE exon 557 632 . - . ID=exon-AD08_RS09480-1;Parent=rna-AD08_RS09480;anticodon=(pos:complement(597..599));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09480;product=tRNA-Ala NZ_JHDJ01000160.1 RefSeq gene 868 1212 . + . ID=gene-AD08_RS09475;Name=AD08_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09475;old_locus_tag=AD08_2741 NZ_JHDJ01000160.1 Protein Homology CDS 868 1212 . + 0 ID=cds-WP_001296278.1-2;Parent=gene-AD08_RS09475;Dbxref=Genbank:WP_001296278.1;Name=WP_001296278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708260.2;locus_tag=AD08_RS09475;product=putative DNA-binding transcriptional regulator;protein_id=WP_001296278.1;transl_table=11 NZ_JHDJ01000160.1 RefSeq gene 1235 1606 . + . ID=gene-AD08_RS09470;Name=AD08_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09470;old_locus_tag=AD08_2742 NZ_JHDJ01000160.1 Protein Homology CDS 1235 1606 . + 0 ID=cds-WP_001341599.1-2;Parent=gene-AD08_RS09470;Dbxref=Genbank:WP_001341599.1;Name=WP_001341599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708261.1;locus_tag=AD08_RS09470;product=putative DNA-binding transcriptional regulator;protein_id=WP_001341599.1;transl_table=11 NZ_JHDJ01000160.1 RefSeq pseudogene 1658 2047 . - . ID=gene-AD08_RS09465;Name=gltX;end_range=2047,.;gbkey=Gene;gene=gltX;gene_biotype=pseudogene;locus_tag=AD08_RS09465;old_locus_tag=AD08_2743;partial=true;pseudo=true NZ_JHDJ01000160.1 Protein Homology CDS 1658 2047 . - 0 ID=cds-AD08_RS09465;Parent=gene-AD08_RS09465;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2047,.;gbkey=CDS;gene=gltX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AD08_RS09465;partial=true;product=glutamate--tRNA ligase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000161.1 1 4275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000161.1 RefSeq region 1 4275 . + . ID=NZ_JHDJ01000161.1:1..4275;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000161.1 RefSeq gene 1 348 . - . ID=gene-AD08_RS09460;Name=AD08_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09460;old_locus_tag=AD08_2744;partial=true;start_range=.,1 NZ_JHDJ01000161.1 Protein Homology CDS 1 348 . - 0 ID=cds-WP_001467393.1-2;Parent=gene-AD08_RS09460;Dbxref=Genbank:WP_001467393.1;Name=WP_001467393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311300.1;locus_tag=AD08_RS09460;partial=true;product=MASE1 family protein;protein_id=WP_001467393.1;start_range=.,1;transl_table=11 NZ_JHDJ01000161.1 RefSeq gene 557 632 . - . ID=gene-AD08_RS09455;Name=AD08_RS09455;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS09455;old_locus_tag=AD08_2745 NZ_JHDJ01000161.1 tRNAscan-SE tRNA 557 632 . - . ID=rna-AD08_RS09455;Parent=gene-AD08_RS09455;anticodon=(pos:complement(597..599));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09455;product=tRNA-Ala NZ_JHDJ01000161.1 tRNAscan-SE exon 557 632 . - . ID=exon-AD08_RS09455-1;Parent=rna-AD08_RS09455;anticodon=(pos:complement(597..599));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09455;product=tRNA-Ala NZ_JHDJ01000161.1 RefSeq gene 672 747 . - . ID=gene-AD08_RS09450;Name=AD08_RS09450;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS09450;old_locus_tag=AD08_2746 NZ_JHDJ01000161.1 tRNAscan-SE tRNA 672 747 . - . ID=rna-AD08_RS09450;Parent=gene-AD08_RS09450;anticodon=(pos:complement(712..714));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09450;product=tRNA-Ala NZ_JHDJ01000161.1 tRNAscan-SE exon 672 747 . - . ID=exon-AD08_RS09450-1;Parent=rna-AD08_RS09450;anticodon=(pos:complement(712..714));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09450;product=tRNA-Ala NZ_JHDJ01000161.1 RefSeq gene 787 862 . - . ID=gene-AD08_RS09445;Name=AD08_RS09445;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS09445;old_locus_tag=AD08_2747 NZ_JHDJ01000161.1 tRNAscan-SE tRNA 787 862 . - . ID=rna-AD08_RS09445;Parent=gene-AD08_RS09445;anticodon=(pos:complement(827..829));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09445;product=tRNA-Ala NZ_JHDJ01000161.1 tRNAscan-SE exon 787 862 . - . ID=exon-AD08_RS09445-1;Parent=rna-AD08_RS09445;anticodon=(pos:complement(827..829));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09445;product=tRNA-Ala NZ_JHDJ01000161.1 RefSeq gene 902 977 . - . ID=gene-AD08_RS09440;Name=AD08_RS09440;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS09440;old_locus_tag=AD08_2748 NZ_JHDJ01000161.1 tRNAscan-SE tRNA 902 977 . - . ID=rna-AD08_RS09440;Parent=gene-AD08_RS09440;anticodon=(pos:complement(942..944));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09440;product=tRNA-Ala NZ_JHDJ01000161.1 tRNAscan-SE exon 902 977 . - . ID=exon-AD08_RS09440-1;Parent=rna-AD08_RS09440;anticodon=(pos:complement(942..944));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09440;product=tRNA-Ala NZ_JHDJ01000161.1 RefSeq gene 1213 1557 . + . ID=gene-AD08_RS09435;Name=AD08_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09435;old_locus_tag=AD08_2749 NZ_JHDJ01000161.1 Protein Homology CDS 1213 1557 . + 0 ID=cds-WP_001296278.1-3;Parent=gene-AD08_RS09435;Dbxref=Genbank:WP_001296278.1;Name=WP_001296278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708260.2;locus_tag=AD08_RS09435;product=putative DNA-binding transcriptional regulator;protein_id=WP_001296278.1;transl_table=11 NZ_JHDJ01000161.1 RefSeq gene 1580 1951 . + . ID=gene-AD08_RS09430;Name=AD08_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09430;old_locus_tag=AD08_2750 NZ_JHDJ01000161.1 Protein Homology CDS 1580 1951 . + 0 ID=cds-WP_001341599.1-3;Parent=gene-AD08_RS09430;Dbxref=Genbank:WP_001341599.1;Name=WP_001341599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708261.1;locus_tag=AD08_RS09430;product=putative DNA-binding transcriptional regulator;protein_id=WP_001341599.1;transl_table=11 NZ_JHDJ01000161.1 RefSeq gene 2003 3418 . - . ID=gene-AD08_RS09425;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AD08_RS09425;old_locus_tag=AD08_2751 NZ_JHDJ01000161.1 Protein Homology CDS 2003 3418 . - 0 ID=cds-WP_000695655.1-2;Parent=gene-AD08_RS09425;Dbxref=Genbank:WP_000695655.1;Name=WP_000695655.1;gbkey=CDS;gene=gltX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AD08_RS09425;product=glutamate--tRNA ligase;protein_id=WP_000695655.1;transl_table=11 NZ_JHDJ01000161.1 RefSeq gene 3677 3752 . + . ID=gene-AD08_RS09420;Name=AD08_RS09420;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS09420;old_locus_tag=AD08_2753 NZ_JHDJ01000161.1 tRNAscan-SE tRNA 3677 3752 . + . ID=rna-AD08_RS09420;Parent=gene-AD08_RS09420;anticodon=(pos:3710..3712);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09420;product=tRNA-Val NZ_JHDJ01000161.1 tRNAscan-SE exon 3677 3752 . + . ID=exon-AD08_RS09420-1;Parent=rna-AD08_RS09420;anticodon=(pos:3710..3712);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09420;product=tRNA-Val NZ_JHDJ01000161.1 RefSeq gene 3783 3858 . + . ID=gene-AD08_RS09415;Name=AD08_RS09415;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS09415;old_locus_tag=AD08_2754 NZ_JHDJ01000161.1 tRNAscan-SE tRNA 3783 3858 . + . ID=rna-AD08_RS09415;Parent=gene-AD08_RS09415;anticodon=(pos:3816..3818);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09415;product=tRNA-Val NZ_JHDJ01000161.1 tRNAscan-SE exon 3783 3858 . + . ID=exon-AD08_RS09415-1;Parent=rna-AD08_RS09415;anticodon=(pos:3816..3818);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09415;product=tRNA-Val NZ_JHDJ01000161.1 RefSeq gene 3905 3980 . + . ID=gene-AD08_RS09410;Name=AD08_RS09410;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS09410;old_locus_tag=AD08_2755 NZ_JHDJ01000161.1 tRNAscan-SE tRNA 3905 3980 . + . ID=rna-AD08_RS09410;Parent=gene-AD08_RS09410;anticodon=(pos:3938..3940);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09410;product=tRNA-Val NZ_JHDJ01000161.1 tRNAscan-SE exon 3905 3980 . + . ID=exon-AD08_RS09410-1;Parent=rna-AD08_RS09410;anticodon=(pos:3938..3940);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09410;product=tRNA-Val NZ_JHDJ01000161.1 RefSeq gene 3985 4060 . + . ID=gene-AD08_RS09405;Name=AD08_RS09405;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS09405;old_locus_tag=AD08_2756 NZ_JHDJ01000161.1 tRNAscan-SE tRNA 3985 4060 . + . ID=rna-AD08_RS09405;Parent=gene-AD08_RS09405;anticodon=(pos:4018..4020);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09405;product=tRNA-Lys NZ_JHDJ01000161.1 tRNAscan-SE exon 3985 4060 . + . ID=exon-AD08_RS09405-1;Parent=rna-AD08_RS09405;anticodon=(pos:4018..4020);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09405;product=tRNA-Lys ##sequence-region NZ_JHDJ01000162.1 1 199439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000162.1 RefSeq region 1 199439 . + . ID=NZ_JHDJ01000162.1:1..199439;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000162.1 RefSeq gene 1 156 . + . ID=gene-AD08_RS27510;Name=AD08_RS27510;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD08_RS27510;partial=true;start_range=.,1 NZ_JHDJ01000162.1 cmsearch ncRNA 1 156 . + . ID=rna-AD08_RS27510;Parent=gene-AD08_RS27510;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27510;partial=true;product=RtT sRNA;start_range=.,1 NZ_JHDJ01000162.1 cmsearch exon 1 156 . + . ID=exon-AD08_RS27510-1;Parent=rna-AD08_RS27510;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27510;partial=true;product=RtT sRNA;start_range=.,1 NZ_JHDJ01000162.1 RefSeq gene 208 283 . + . ID=gene-AD08_RS09395;Name=AD08_RS09395;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS09395;old_locus_tag=AD08_2759 NZ_JHDJ01000162.1 tRNAscan-SE tRNA 208 283 . + . ID=rna-AD08_RS09395;Parent=gene-AD08_RS09395;anticodon=(pos:241..243);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09395;product=tRNA-Val NZ_JHDJ01000162.1 tRNAscan-SE exon 208 283 . + . ID=exon-AD08_RS09395-1;Parent=rna-AD08_RS09395;anticodon=(pos:241..243);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09395;product=tRNA-Val NZ_JHDJ01000162.1 RefSeq gene 288 363 . + . ID=gene-AD08_RS09390;Name=AD08_RS09390;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS09390;old_locus_tag=AD08_2760 NZ_JHDJ01000162.1 tRNAscan-SE tRNA 288 363 . + . ID=rna-AD08_RS09390;Parent=gene-AD08_RS09390;anticodon=(pos:321..323);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09390;product=tRNA-Lys NZ_JHDJ01000162.1 tRNAscan-SE exon 288 363 . + . ID=exon-AD08_RS09390-1;Parent=rna-AD08_RS09390;anticodon=(pos:321..323);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS09390;product=tRNA-Lys NZ_JHDJ01000162.1 RefSeq gene 394 519 . + . ID=gene-AD08_RS27515;Name=AD08_RS27515;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD08_RS27515 NZ_JHDJ01000162.1 cmsearch ncRNA 394 519 . + . ID=rna-AD08_RS27515;Parent=gene-AD08_RS27515;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27515;product=RtT sRNA NZ_JHDJ01000162.1 cmsearch exon 394 519 . + . ID=exon-AD08_RS27515-1;Parent=rna-AD08_RS27515;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27515;product=RtT sRNA NZ_JHDJ01000162.1 RefSeq gene 628 1512 . - . ID=gene-AD08_RS09385;Name=xapR;gbkey=Gene;gene=xapR;gene_biotype=protein_coding;locus_tag=AD08_RS09385;old_locus_tag=AD08_2761 NZ_JHDJ01000162.1 Protein Homology CDS 628 1512 . - 0 ID=cds-WP_000442949.1;Parent=gene-AD08_RS09385;Dbxref=Genbank:WP_000442949.1;Name=WP_000442949.1;gbkey=CDS;gene=xapR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416900.1;locus_tag=AD08_RS09385;product=DNA-binding transcriptional regulator XapR;protein_id=WP_000442949.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 1553 1711 . - . ID=gene-AD08_RS09380;Name=AD08_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09380;old_locus_tag=AD08_2762 NZ_JHDJ01000162.1 Protein Homology CDS 1553 1711 . - 0 ID=cds-WP_000651752.1;Parent=gene-AD08_RS09380;Dbxref=Genbank:WP_000651752.1;Name=WP_000651752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392449.1;locus_tag=AD08_RS09380;product=DUF1427 family protein;protein_id=WP_000651752.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 1764 3020 . - . ID=gene-AD08_RS09375;Name=xapB;gbkey=Gene;gene=xapB;gene_biotype=protein_coding;locus_tag=AD08_RS09375;old_locus_tag=AD08_2763 NZ_JHDJ01000162.1 Protein Homology CDS 1764 3020 . - 0 ID=cds-WP_000020402.1;Parent=gene-AD08_RS09375;Dbxref=Genbank:WP_000020402.1;Name=WP_000020402.1;gbkey=CDS;gene=xapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416901.1;locus_tag=AD08_RS09375;product=xanthosine/proton symporter XapB;protein_id=WP_000020402.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 3080 3913 . - . ID=gene-AD08_RS09370;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=AD08_RS09370;old_locus_tag=AD08_2764 NZ_JHDJ01000162.1 Protein Homology CDS 3080 3913 . - 0 ID=cds-WP_000084573.1;Parent=gene-AD08_RS09370;Dbxref=Genbank:WP_000084573.1;Name=WP_000084573.1;gbkey=CDS;gene=xapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416902.1;locus_tag=AD08_RS09370;product=xanthosine phosphorylase;protein_id=WP_000084573.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 4162 4926 . + . ID=gene-AD08_RS09365;Name=AD08_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09365;old_locus_tag=AD08_2765 NZ_JHDJ01000162.1 Protein Homology CDS 4162 4926 . + 0 ID=cds-WP_000716421.1;Parent=gene-AD08_RS09365;Dbxref=Genbank:WP_000716421.1;Name=WP_000716421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416903.1;locus_tag=AD08_RS09365;product=outer membrane protein;protein_id=WP_000716421.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 4965 5891 . - . ID=gene-AD08_RS09360;Name=AD08_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09360;old_locus_tag=AD08_2766 NZ_JHDJ01000162.1 Protein Homology CDS 4965 5891 . - 0 ID=cds-WP_001109794.1;Parent=gene-AD08_RS09360;Dbxref=Genbank:WP_001109794.1;Name=WP_001109794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416904.1;locus_tag=AD08_RS09360;product=LysR family transcriptional regulator;protein_id=WP_001109794.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 5981 6979 . + . ID=gene-AD08_RS09355;Name=AD08_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09355;old_locus_tag=AD08_2767 NZ_JHDJ01000162.1 Protein Homology CDS 5981 6979 . + 0 ID=cds-WP_032219037.1;Parent=gene-AD08_RS09355;Dbxref=Genbank:WP_032219037.1;Name=WP_032219037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416905.1;locus_tag=AD08_RS09355;product=bile acid:sodium symporter;protein_id=WP_032219037.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 6976 7194 . - . ID=gene-AD08_RS09350;Name=AD08_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09350;old_locus_tag=AD08_2768 NZ_JHDJ01000162.1 Protein Homology CDS 6976 7194 . - 0 ID=cds-WP_000410201.1;Parent=gene-AD08_RS09350;Dbxref=Genbank:WP_000410201.1;Name=WP_000410201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=AD08_RS09350;product=DUF3820 domain-containing protein;protein_id=WP_000410201.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 7196 9211 . - . ID=gene-AD08_RS09345;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AD08_RS09345;old_locus_tag=AD08_2769 NZ_JHDJ01000162.1 Protein Homology CDS 7196 9211 . - 0 ID=cds-WP_000443661.1;Parent=gene-AD08_RS09345;Dbxref=Genbank:WP_000443661.1;Name=WP_000443661.1;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416906.1;locus_tag=AD08_RS09345;product=NAD-dependent DNA ligase LigA;protein_id=WP_000443661.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 9282 10268 . - . ID=gene-AD08_RS09340;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=AD08_RS09340;old_locus_tag=AD08_2770 NZ_JHDJ01000162.1 Protein Homology CDS 9282 10268 . - 0 ID=cds-WP_001300494.1;Parent=gene-AD08_RS09340;Dbxref=Genbank:WP_001300494.1;Name=WP_001300494.1;gbkey=CDS;gene=zipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416907.1;locus_tag=AD08_RS09340;product=cell division protein ZipA;protein_id=WP_001300494.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 10498 11259 . + . ID=gene-AD08_RS09335;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=AD08_RS09335;old_locus_tag=AD08_2771 NZ_JHDJ01000162.1 Protein Homology CDS 10498 11259 . + 0 ID=cds-WP_000254839.1;Parent=gene-AD08_RS09335;Dbxref=Genbank:WP_000254839.1;Name=WP_000254839.1;gbkey=CDS;gene=cysZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311312.1;locus_tag=AD08_RS09335;product=sulfate transporter CysZ;protein_id=WP_000254839.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 11444 12415 . + . ID=gene-AD08_RS09330;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=AD08_RS09330;old_locus_tag=AD08_2772 NZ_JHDJ01000162.1 Protein Homology CDS 11444 12415 . + 0 ID=cds-WP_032219039.1;Parent=gene-AD08_RS09330;Dbxref=Genbank:WP_032219039.1;Name=WP_032219039.1;gbkey=CDS;gene=cysK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=AD08_RS09330;product=cysteine synthase A;protein_id=WP_032219039.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 12799 13056 . + . ID=gene-AD08_RS09325;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=AD08_RS09325;old_locus_tag=AD08_2773 NZ_JHDJ01000162.1 Protein Homology CDS 12799 13056 . + 0 ID=cds-WP_000487600.1;Parent=gene-AD08_RS09325;Dbxref=Genbank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=AD08_RS09325;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 13101 14828 . + . ID=gene-AD08_RS09320;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=AD08_RS09320;old_locus_tag=AD08_2774 NZ_JHDJ01000162.1 Protein Homology CDS 13101 14828 . + 0 ID=cds-WP_000623140.1;Parent=gene-AD08_RS09320;Dbxref=Genbank:WP_000623140.1;Name=WP_000623140.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416911.1;locus_tag=AD08_RS09320;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623140.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 14869 15378 . + . ID=gene-AD08_RS09315;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=AD08_RS09315;old_locus_tag=AD08_2775 NZ_JHDJ01000162.1 Protein Homology CDS 14869 15378 . + 0 ID=cds-WP_000522247.1;Parent=gene-AD08_RS09315;Dbxref=Genbank:WP_000522247.1;Name=WP_000522247.1;gbkey=CDS;gene=crr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=AD08_RS09315;product=PTS glucose transporter subunit IIA;protein_id=WP_000522247.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 15421 16272 . - . ID=gene-AD08_RS09310;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=AD08_RS09310;old_locus_tag=AD08_2776 NZ_JHDJ01000162.1 Protein Homology CDS 15421 16272 . - 0 ID=cds-WP_000096674.1;Parent=gene-AD08_RS09310;Dbxref=Genbank:WP_000096674.1;Name=WP_000096674.1;gbkey=CDS;gene=pdxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416913.1;locus_tag=AD08_RS09310;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000096674.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 16377 16751 . + . ID=gene-AD08_RS09305;Name=AD08_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09305;old_locus_tag=AD08_2777 NZ_JHDJ01000162.1 Protein Homology CDS 16377 16751 . + 0 ID=cds-WP_000719962.1;Parent=gene-AD08_RS09305;Dbxref=Genbank:WP_000719962.1;Name=WP_000719962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416914.1;locus_tag=AD08_RS09305;product=YfeK family protein;protein_id=WP_000719962.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 16784 17518 . + . ID=gene-AD08_RS09300;Name=AD08_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09300;old_locus_tag=AD08_2778 NZ_JHDJ01000162.1 Protein Homology CDS 16784 17518 . + 0 ID=cds-WP_000745534.1;Parent=gene-AD08_RS09300;Dbxref=Genbank:WP_000745534.1;Name=WP_000745534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416915.1;locus_tag=AD08_RS09300;product=WGR domain-containing protein;protein_id=WP_000745534.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 17707 18618 . - . ID=gene-AD08_RS09295;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=AD08_RS09295;old_locus_tag=AD08_2779 NZ_JHDJ01000162.1 Protein Homology CDS 17707 18618 . - 0 ID=cds-WP_001336044.1;Parent=gene-AD08_RS09295;Dbxref=Genbank:WP_001336044.1;Name=WP_001336044.1;gbkey=CDS;gene=cysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416916.1;locus_tag=AD08_RS09295;product=cysteine synthase B;protein_id=WP_001336044.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 18752 19849 . - . ID=gene-AD08_RS09290;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=AD08_RS09290;old_locus_tag=AD08_2780 NZ_JHDJ01000162.1 Protein Homology CDS 18752 19849 . - 0 ID=cds-WP_000021036.1;Parent=gene-AD08_RS09290;Dbxref=Genbank:WP_000021036.1;Name=WP_000021036.1;gbkey=CDS;gene=cysA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416917.1;locus_tag=AD08_RS09290;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021036.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 19839 20714 . - . ID=gene-AD08_RS09285;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=AD08_RS09285;old_locus_tag=AD08_2781 NZ_JHDJ01000162.1 Protein Homology CDS 19839 20714 . - 0 ID=cds-WP_000852686.1;Parent=gene-AD08_RS09285;Dbxref=Genbank:WP_000852686.1;Name=WP_000852686.1;gbkey=CDS;gene=cysW;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026168.2;locus_tag=AD08_RS09285;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852686.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 20714 21547 . - . ID=gene-AD08_RS09280;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=AD08_RS09280;old_locus_tag=AD08_2782 NZ_JHDJ01000162.1 Protein Homology CDS 20714 21547 . - 0 ID=cds-WP_000458406.1;Parent=gene-AD08_RS09280;Dbxref=Genbank:WP_000458406.1;Name=WP_000458406.1;gbkey=CDS;gene=cysT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=AD08_RS09280;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000458406.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 21547 22563 . - . ID=gene-AD08_RS09275;Name=AD08_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09275;old_locus_tag=AD08_2783 NZ_JHDJ01000162.1 Protein Homology CDS 21547 22563 . - 0 ID=cds-WP_000290230.1;Parent=gene-AD08_RS09275;Dbxref=Genbank:WP_000290230.1;Name=WP_000290230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416920.1;locus_tag=AD08_RS09275;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_000290230.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 22867 23658 . - . ID=gene-AD08_RS09270;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=AD08_RS09270;old_locus_tag=AD08_2784 NZ_JHDJ01000162.1 Protein Homology CDS 22867 23658 . - 0 ID=cds-WP_032219042.1;Parent=gene-AD08_RS09270;Dbxref=Genbank:WP_032219042.1;Name=WP_032219042.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416921.4;locus_tag=AD08_RS09270;product=SDR family oxidoreductase UcpA;protein_id=WP_032219042.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 23787 24644 . - . ID=gene-AD08_RS09265;Name=murR;gbkey=Gene;gene=murR;gene_biotype=protein_coding;locus_tag=AD08_RS09265;old_locus_tag=AD08_2785 NZ_JHDJ01000162.1 Protein Homology CDS 23787 24644 . - 0 ID=cds-WP_032219045.1;Parent=gene-AD08_RS09265;Dbxref=Genbank:WP_032219045.1;Name=WP_032219045.1;gbkey=CDS;gene=murR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416922.1;locus_tag=AD08_RS09265;product=HTH-type transcriptional regulator MurR;protein_id=WP_032219045.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 24808 25704 . + . ID=gene-AD08_RS09260;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=AD08_RS09260;old_locus_tag=AD08_2786 NZ_JHDJ01000162.1 Protein Homology CDS 24808 25704 . + 0 ID=cds-WP_001159160.1;Parent=gene-AD08_RS09260;Dbxref=Genbank:WP_001159160.1;Name=WP_001159160.1;gbkey=CDS;gene=murQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416923.1;locus_tag=AD08_RS09260;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001159160.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 25708 27132 . + . ID=gene-AD08_RS09255;Name=murP;gbkey=Gene;gene=murP;gene_biotype=protein_coding;locus_tag=AD08_RS09255;old_locus_tag=AD08_2787 NZ_JHDJ01000162.1 Protein Homology CDS 25708 27132 . + 0 ID=cds-WP_001040483.1;Parent=gene-AD08_RS09255;Dbxref=Genbank:WP_001040483.1;Name=WP_001040483.1;gbkey=CDS;gene=murP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416924.1;locus_tag=AD08_RS09255;product=PTS N-acetylmuramic acid transporter subunit IIBC;protein_id=WP_001040483.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 27137 28441 . + . ID=gene-AD08_RS09250;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=AD08_RS09250;old_locus_tag=AD08_2788 NZ_JHDJ01000162.1 Protein Homology CDS 27137 28441 . + 0 ID=cds-WP_001327042.1;Parent=gene-AD08_RS09250;Dbxref=Genbank:WP_001327042.1;Name=WP_001327042.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416925.2;locus_tag=AD08_RS09250;product=penicillin binding protein PBP4B;protein_id=WP_001327042.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 28681 29580 . - . ID=gene-AD08_RS09245;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=AD08_RS09245;old_locus_tag=AD08_2789 NZ_JHDJ01000162.1 Protein Homology CDS 28681 29580 . - 0 ID=cds-WP_000084590.1;Parent=gene-AD08_RS09245;Dbxref=Genbank:WP_000084590.1;Name=WP_000084590.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311329.2;locus_tag=AD08_RS09245;product=porphyrinogen peroxidase;protein_id=WP_000084590.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 29676 30251 . - . ID=gene-AD08_RS09240;Name=AD08_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09240;old_locus_tag=AD08_2790 NZ_JHDJ01000162.1 Protein Homology CDS 29676 30251 . - 0 ID=cds-WP_000838944.1;Parent=gene-AD08_RS09240;Dbxref=Genbank:WP_000838944.1;Name=WP_000838944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416927.1;locus_tag=AD08_RS09240;product=RpoE-regulated lipoprotein;protein_id=WP_000838944.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 30312 30761 . - . ID=gene-AD08_RS0126355;Name=AD08_RS0126355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126355 NZ_JHDJ01000162.1 Protein Homology CDS 30312 30761 . - 0 ID=cds-WP_000842944.1;Parent=gene-AD08_RS0126355;Dbxref=Genbank:WP_000842944.1;Name=WP_000842944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311331.2;locus_tag=AD08_RS0126355;product=DUF2919 domain-containing protein;protein_id=WP_000842944.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 30748 31173 . - . ID=gene-AD08_RS09235;Name=AD08_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09235;old_locus_tag=AD08_2792 NZ_JHDJ01000162.1 Protein Homology CDS 30748 31173 . - 0 ID=cds-WP_000405996.1;Parent=gene-AD08_RS09235;Dbxref=Genbank:WP_000405996.1;Name=WP_000405996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130053.1;locus_tag=AD08_RS09235;product=GNAT family acetyltransferase;protein_id=WP_000405996.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 31387 32256 . + . ID=gene-AD08_RS09230;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=AD08_RS09230;old_locus_tag=AD08_2793 NZ_JHDJ01000162.1 Protein Homology CDS 31387 32256 . + 0 ID=cds-WP_000102886.1;Parent=gene-AD08_RS09230;Dbxref=Genbank:WP_000102886.1;Name=WP_000102886.1;gbkey=CDS;gene=amiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416930.1;locus_tag=AD08_RS09230;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102886.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 32260 33159 . + . ID=gene-AD08_RS09225;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=AD08_RS09225;old_locus_tag=AD08_2794 NZ_JHDJ01000162.1 Protein Homology CDS 32260 33159 . + 0 ID=cds-WP_000801365.1;Parent=gene-AD08_RS09225;Dbxref=Genbank:WP_000801365.1;Name=WP_000801365.1;gbkey=CDS;gene=hemF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416931.1;locus_tag=AD08_RS09225;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_000801365.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 33165 34217 . - . ID=gene-AD08_RS09220;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=AD08_RS09220;old_locus_tag=AD08_2795 NZ_JHDJ01000162.1 Protein Homology CDS 33165 34217 . - 0 ID=cds-WP_000753690.1;Parent=gene-AD08_RS09220;Dbxref=Genbank:WP_000753690.1;Name=WP_000753690.1;gbkey=CDS;gene=eutR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416932.1;locus_tag=AD08_RS09220;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753690.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 34263 34763 . - . ID=gene-AD08_RS09215;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=AD08_RS09215;old_locus_tag=AD08_2796 NZ_JHDJ01000162.1 Protein Homology CDS 34263 34763 . - 0 ID=cds-WP_000606257.1;Parent=gene-AD08_RS09215;Dbxref=Genbank:WP_000606257.1;Name=WP_000606257.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416933.4;locus_tag=AD08_RS09215;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606257.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 34776 35435 . - . ID=gene-AD08_RS09210;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=AD08_RS09210;old_locus_tag=AD08_2797 NZ_JHDJ01000162.1 Protein Homology CDS 34776 35435 . - 0 ID=cds-WP_001111023.1;Parent=gene-AD08_RS09210;Dbxref=Genbank:WP_001111023.1;Name=WP_001111023.1;gbkey=CDS;gene=eutL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416934.1;locus_tag=AD08_RS09210;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111023.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 35445 36332 . - . ID=gene-AD08_RS09205;Name=AD08_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09205;old_locus_tag=AD08_2798 NZ_JHDJ01000162.1 Protein Homology CDS 35445 36332 . - 0 ID=cds-WP_000372316.1;Parent=gene-AD08_RS09205;Dbxref=Genbank:WP_000372316.1;Name=WP_000372316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416935.1;locus_tag=AD08_RS09205;product=ethanolamine ammonia-lyase subunit beta;protein_id=WP_000372316.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 36353 37714 . - . ID=gene-AD08_RS09200;Name=AD08_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09200;old_locus_tag=AD08_2799 NZ_JHDJ01000162.1 Protein Homology CDS 36353 37714 . - 0 ID=cds-WP_000769961.1;Parent=gene-AD08_RS09200;Dbxref=Genbank:WP_000769961.1;Name=WP_000769961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311339.1;locus_tag=AD08_RS09200;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000769961.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 37726 39129 . - . ID=gene-AD08_RS09195;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=AD08_RS09195;old_locus_tag=AD08_2800 NZ_JHDJ01000162.1 Protein Homology CDS 37726 39129 . - 0 ID=cds-WP_001097542.1;Parent=gene-AD08_RS09195;Dbxref=Genbank:WP_001097542.1;Name=WP_001097542.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416946.1;locus_tag=AD08_RS09195;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_001097542.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 39126 40352 . - . ID=gene-AD08_RS09190;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=AD08_RS09190;old_locus_tag=AD08_2801 NZ_JHDJ01000162.1 Protein Homology CDS 39126 40352 . - 0 ID=cds-WP_000512372.1;Parent=gene-AD08_RS09190;Dbxref=Genbank:WP_000512372.1;Name=WP_000512372.1;gbkey=CDS;gene=eutH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416947.1;locus_tag=AD08_RS09190;product=ethanolamine utilization protein EutH;protein_id=WP_000512372.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 40569 41756 . - . ID=gene-AD08_RS09185;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=AD08_RS09185;old_locus_tag=AD08_2802 NZ_JHDJ01000162.1 Protein Homology CDS 40569 41756 . - 0 ID=cds-WP_001326575.1;Parent=gene-AD08_RS09185;Dbxref=Genbank:WP_001326575.1;Name=WP_001326575.1;gbkey=CDS;gene=eutG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416948.4;locus_tag=AD08_RS09185;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001326575.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 41746 42582 . - . ID=gene-AD08_RS09180;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=AD08_RS09180;old_locus_tag=AD08_2803 NZ_JHDJ01000162.1 Protein Homology CDS 41746 42582 . - 0 ID=cds-WP_001530798.1;Parent=gene-AD08_RS09180;Dbxref=Genbank:WP_001530798.1;Name=WP_001530798.1;gbkey=CDS;gene=eutJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416949.1;locus_tag=AD08_RS09180;product=ethanolamine utilization protein EutJ;protein_id=WP_001530798.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 42593 43996 . - . ID=gene-AD08_RS09175;Name=AD08_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09175;old_locus_tag=AD08_2804 NZ_JHDJ01000162.1 Protein Homology CDS 42593 43996 . - 0 ID=cds-WP_001075716.1;Parent=gene-AD08_RS09175;Dbxref=Genbank:WP_001075716.1;Name=WP_001075716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416950.1;locus_tag=AD08_RS09175;product=aldehyde dehydrogenase EutE;protein_id=WP_001075716.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 44008 44295 . - . ID=gene-AD08_RS09170;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=AD08_RS09170;old_locus_tag=AD08_2805 NZ_JHDJ01000162.1 Protein Homology CDS 44008 44295 . - 0 ID=cds-WP_000762196.1;Parent=gene-AD08_RS09170;Dbxref=Genbank:WP_000762196.1;Name=WP_000762196.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=AD08_RS09170;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_000762196.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 44402 44695 . - . ID=gene-AD08_RS09165;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=AD08_RS09165;old_locus_tag=AD08_2806 NZ_JHDJ01000162.1 Protein Homology CDS 44402 44695 . - 0 ID=cds-WP_000387713.1;Parent=gene-AD08_RS09165;Dbxref=Genbank:WP_000387713.1;Name=WP_000387713.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416952.2;locus_tag=AD08_RS09165;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387713.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 44734 45750 . - . ID=gene-AD08_RS09160;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AD08_RS09160;old_locus_tag=AD08_2807 NZ_JHDJ01000162.1 Protein Homology CDS 44734 45750 . - 0 ID=cds-WP_000582977.1;Parent=gene-AD08_RS09160;Dbxref=Genbank:WP_000582977.1;Name=WP_000582977.1;gbkey=CDS;gene=pta;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416953.1;locus_tag=AD08_RS09160;product=phosphate acetyltransferase;protein_id=WP_000582977.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 45747 46550 . - . ID=gene-AD08_RS09155;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=AD08_RS09155;old_locus_tag=AD08_2808 NZ_JHDJ01000162.1 Protein Homology CDS 45747 46550 . - 0 ID=cds-WP_000651298.1;Parent=gene-AD08_RS09155;Dbxref=Genbank:WP_000651298.1;Name=WP_000651298.1;gbkey=CDS;gene=eutT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416954.1;locus_tag=AD08_RS09155;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000651298.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 46547 47248 . - . ID=gene-AD08_RS09150;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=AD08_RS09150;old_locus_tag=AD08_2809 NZ_JHDJ01000162.1 Protein Homology CDS 46547 47248 . - 0 ID=cds-WP_000733906.1;Parent=gene-AD08_RS09150;Dbxref=Genbank:WP_000733906.1;Name=WP_000733906.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416955.1;locus_tag=AD08_RS09150;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733906.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 47223 47702 . - . ID=gene-AD08_RS09145;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=AD08_RS09145;old_locus_tag=AD08_2810 NZ_JHDJ01000162.1 Protein Homology CDS 47223 47702 . - 0 ID=cds-WP_000820762.1;Parent=gene-AD08_RS09145;Dbxref=Genbank:WP_000820762.1;Name=WP_000820762.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416956.1;locus_tag=AD08_RS09145;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820762.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 47715 48050 . - . ID=gene-AD08_RS09140;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=AD08_RS09140;old_locus_tag=AD08_2811 NZ_JHDJ01000162.1 Protein Homology CDS 47715 48050 . - 0 ID=cds-WP_001333989.1;Parent=gene-AD08_RS09140;Dbxref=Genbank:WP_001333989.1;Name=WP_001333989.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311351.2;locus_tag=AD08_RS09140;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001333989.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 48342 50621 . - . ID=gene-AD08_RS09135;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=AD08_RS09135;old_locus_tag=AD08_2812 NZ_JHDJ01000162.1 Protein Homology CDS 48342 50621 . - 0 ID=cds-WP_000342644.1;Parent=gene-AD08_RS09135;Dbxref=Genbank:WP_000342644.1;Name=WP_000342644.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416958.1;locus_tag=AD08_RS09135;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000342644.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 50910 51860 . + . ID=gene-AD08_RS09130;Name=AD08_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09130;old_locus_tag=AD08_2813 NZ_JHDJ01000162.1 Protein Homology CDS 50910 51860 . + 0 ID=cds-WP_001003709.1;Parent=gene-AD08_RS09130;Dbxref=Genbank:WP_001003709.1;Name=WP_001003709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311353.1;locus_tag=AD08_RS09130;product=transaldolase;protein_id=WP_001003709.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 51880 53883 . + . ID=gene-AD08_RS09125;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AD08_RS09125;old_locus_tag=AD08_2814 NZ_JHDJ01000162.1 Protein Homology CDS 51880 53883 . + 0 ID=cds-WP_001694125.1;Parent=gene-AD08_RS09125;Dbxref=Genbank:WP_001694125.1;Name=WP_001694125.1;gbkey=CDS;gene=tkt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416960.1;locus_tag=AD08_RS09125;product=transketolase;protein_id=WP_001694125.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 53978 55021 . - . ID=gene-AD08_RS09120;Name=AD08_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09120;old_locus_tag=AD08_2815 NZ_JHDJ01000162.1 Protein Homology CDS 53978 55021 . - 0 ID=cds-WP_001270542.1;Parent=gene-AD08_RS09120;Dbxref=Genbank:WP_001270542.1;Name=WP_001270542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416961.1;locus_tag=AD08_RS09120;product=DUF1176 domain-containing protein;protein_id=WP_001270542.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 55147 55722 . - . ID=gene-AD08_RS09115;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=AD08_RS09115;old_locus_tag=AD08_2816 NZ_JHDJ01000162.1 Protein Homology CDS 55147 55722 . - 0 ID=cds-WP_032219059.1;Parent=gene-AD08_RS09115;Dbxref=Genbank:WP_032219059.1;Name=WP_032219059.1;gbkey=CDS;gene=nudK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416962.1;locus_tag=AD08_RS09115;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_032219059.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 55790 57769 . - . ID=gene-AD08_RS09110;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=AD08_RS09110;old_locus_tag=AD08_2817 NZ_JHDJ01000162.1 Protein Homology CDS 55790 57769 . - 0 ID=cds-WP_001078880.1;Parent=gene-AD08_RS09110;Dbxref=Genbank:WP_001078880.1;Name=WP_001078880.1;gbkey=CDS;gene=aegA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416963.1;locus_tag=AD08_RS09110;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_001078880.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 57975 59675 . + . ID=gene-AD08_RS09105;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=AD08_RS09105;old_locus_tag=AD08_2818 NZ_JHDJ01000162.1 Protein Homology CDS 57975 59675 . + 0 ID=cds-WP_001300881.1;Parent=gene-AD08_RS09105;Dbxref=Genbank:WP_001300881.1;Name=WP_001300881.1;gbkey=CDS;gene=narQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416964.1;locus_tag=AD08_RS09105;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_001300881.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 59839 62952 . + . ID=gene-AD08_RS09100;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=AD08_RS09100;old_locus_tag=AD08_2819 NZ_JHDJ01000162.1 Protein Homology CDS 59839 62952 . + 0 ID=cds-WP_001273151.1;Parent=gene-AD08_RS09100;Dbxref=Genbank:WP_001273151.1;Name=WP_001273151.1;gbkey=CDS;gene=acrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416965.1;locus_tag=AD08_RS09100;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001273151.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 63051 63110 . - . ID=gene-AD08_RS30625;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=AD08_RS30625 NZ_JHDJ01000162.1 Protein Homology CDS 63051 63110 . - 0 ID=cds-WP_001386977.1;Parent=gene-AD08_RS30625;Dbxref=Genbank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=AD08_RS30625;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 63491 63847 . + . ID=gene-AD08_RS09095;Name=AD08_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09095;old_locus_tag=AD08_2820 NZ_JHDJ01000162.1 Protein Homology CDS 63491 63847 . + 0 ID=cds-WP_000258236.1;Parent=gene-AD08_RS09095;Dbxref=Genbank:WP_000258236.1;Name=WP_000258236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416966.1;locus_tag=AD08_RS09095;product=ArsC family reductase;protein_id=WP_000258236.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 63851 64978 . + . ID=gene-AD08_RS09090;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=AD08_RS09090;old_locus_tag=AD08_2821 NZ_JHDJ01000162.1 Protein Homology CDS 63851 64978 . + 0 ID=cds-WP_001277801.1;Parent=gene-AD08_RS09090;Dbxref=Genbank:WP_001277801.1;Name=WP_001277801.1;gbkey=CDS;gene=dapE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=AD08_RS09090;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277801.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 65006 65206 . + . ID=gene-AD08_RS09085;Name=AD08_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09085;old_locus_tag=AD08_2822 NZ_JHDJ01000162.1 Protein Homology CDS 65006 65206 . + 0 ID=cds-WP_000383836.1;Parent=gene-AD08_RS09085;Dbxref=Genbank:WP_000383836.1;Name=WP_000383836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588465.1;locus_tag=AD08_RS09085;product=YpfN family protein;protein_id=WP_000383836.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 65316 66014 . - . ID=gene-AD08_RS09080;Name=ypfH;gbkey=Gene;gene=ypfH;gene_biotype=protein_coding;locus_tag=AD08_RS09080;old_locus_tag=AD08_2823 NZ_JHDJ01000162.1 Protein Homology CDS 65316 66014 . - 0 ID=cds-WP_000679799.1;Parent=gene-AD08_RS09080;Dbxref=Genbank:WP_000679799.1;Name=WP_000679799.1;gbkey=CDS;gene=ypfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416968.2;locus_tag=AD08_RS09080;product=esterase;protein_id=WP_000679799.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 66088 68103 . - . ID=gene-AD08_RS09075;Name=AD08_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09075;old_locus_tag=AD08_2824 NZ_JHDJ01000162.1 Protein Homology CDS 66088 68103 . - 0 ID=cds-WP_000829360.1;Parent=gene-AD08_RS09075;Dbxref=Genbank:WP_000829360.1;Name=WP_000829360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416969.1;locus_tag=AD08_RS09075;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_000829360.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 68118 68981 . - . ID=gene-AD08_RS09070;Name=AD08_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09070;old_locus_tag=AD08_2825 NZ_JHDJ01000162.1 Protein Homology CDS 68118 68981 . - 0 ID=cds-WP_032219066.1;Parent=gene-AD08_RS09070;Dbxref=Genbank:WP_032219066.1;Name=WP_032219066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311364.1;locus_tag=AD08_RS09070;product=neutral zinc metallopeptidase;protein_id=WP_032219066.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 69149 69862 . - . ID=gene-AD08_RS09065;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=AD08_RS09065;old_locus_tag=AD08_2826 NZ_JHDJ01000162.1 Protein Homology CDS 69149 69862 . - 0 ID=cds-WP_001295467.1;Parent=gene-AD08_RS09065;Dbxref=Genbank:WP_001295467.1;Name=WP_001295467.1;gbkey=CDS;gene=purC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311365.1;locus_tag=AD08_RS09065;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001295467.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 70075 71109 . - . ID=gene-AD08_RS09060;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=AD08_RS09060;old_locus_tag=AD08_2827 NZ_JHDJ01000162.1 Protein Homology CDS 70075 71109 . - 0 ID=cds-WP_001297320.1;Parent=gene-AD08_RS09060;Dbxref=Genbank:WP_001297320.1;Name=WP_001297320.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708316.2;locus_tag=AD08_RS09060;product=outer membrane protein assembly factor BamC;protein_id=WP_001297320.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 71126 72004 . - . ID=gene-AD08_RS09055;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=AD08_RS09055;old_locus_tag=AD08_2828 NZ_JHDJ01000162.1 Protein Homology CDS 71126 72004 . - 0 ID=cds-WP_001311023.1;Parent=gene-AD08_RS09055;Dbxref=Genbank:WP_001311023.1;Name=WP_001311023.1;gbkey=CDS;gene=dapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=AD08_RS09055;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_001311023.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 72150 72722 . + . ID=gene-AD08_RS09050;Name=AD08_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09050;old_locus_tag=AD08_2829 NZ_JHDJ01000162.1 Protein Homology CDS 72150 72722 . + 0 ID=cds-WP_000176187.1;Parent=gene-AD08_RS09050;Dbxref=Genbank:WP_000176187.1;Name=WP_000176187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=AD08_RS09050;product=glycine cleavage system transcriptional repressor;protein_id=WP_000176187.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 72722 73192 . + . ID=gene-AD08_RS09045;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=AD08_RS09045;old_locus_tag=AD08_2830 NZ_JHDJ01000162.1 Protein Homology CDS 72722 73192 . + 0 ID=cds-WP_001068682.1;Parent=gene-AD08_RS09045;Dbxref=Genbank:WP_001068682.1;Name=WP_001068682.1;gbkey=CDS;gene=bcp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311369.1;locus_tag=AD08_RS09045;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068682.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 73445 74062 . + . ID=gene-AD08_RS09040;Name=hyfA;gbkey=Gene;gene=hyfA;gene_biotype=protein_coding;locus_tag=AD08_RS09040;old_locus_tag=AD08_2831 NZ_JHDJ01000162.1 Protein Homology CDS 73445 74062 . + 0 ID=cds-WP_032219070.1;Parent=gene-AD08_RS09040;Dbxref=Genbank:WP_032219070.1;Name=WP_032219070.1;gbkey=CDS;gene=hyfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416976.4;locus_tag=AD08_RS09040;product=hydrogenase 4 subunit HyfA;protein_id=WP_032219070.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 74062 76080 . + . ID=gene-AD08_RS09035;Name=hyfB;gbkey=Gene;gene=hyfB;gene_biotype=protein_coding;locus_tag=AD08_RS09035;old_locus_tag=AD08_2832 NZ_JHDJ01000162.1 Protein Homology CDS 74062 76080 . + 0 ID=cds-WP_000339476.1;Parent=gene-AD08_RS09035;Dbxref=Genbank:WP_000339476.1;Name=WP_000339476.1;gbkey=CDS;gene=hyfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416977.1;locus_tag=AD08_RS09035;product=hydrogenase 4 subunit B;protein_id=WP_000339476.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 76091 77038 . + . ID=gene-AD08_RS09030;Name=hyfC;gbkey=Gene;gene=hyfC;gene_biotype=protein_coding;locus_tag=AD08_RS09030;old_locus_tag=AD08_2833 NZ_JHDJ01000162.1 Protein Homology CDS 76091 77038 . + 0 ID=cds-WP_001311024.1;Parent=gene-AD08_RS09030;Dbxref=Genbank:WP_001311024.1;Name=WP_001311024.1;gbkey=CDS;gene=hyfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416978.4;locus_tag=AD08_RS09030;product=hydrogenase 4 subunit HyfC;protein_id=WP_001311024.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 77055 78494 . + . ID=gene-AD08_RS09025;Name=AD08_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS09025;old_locus_tag=AD08_2834 NZ_JHDJ01000162.1 Protein Homology CDS 77055 78494 . + 0 ID=cds-WP_000429104.1;Parent=gene-AD08_RS09025;Dbxref=Genbank:WP_000429104.1;Name=WP_000429104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416979.1;locus_tag=AD08_RS09025;product=hydrogenase 4 subunit HyfD;protein_id=WP_000429104.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 78506 79156 . + . ID=gene-AD08_RS09020;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=AD08_RS09020;old_locus_tag=AD08_2835 NZ_JHDJ01000162.1 Protein Homology CDS 78506 79156 . + 0 ID=cds-WP_000147987.1;Parent=gene-AD08_RS09020;Dbxref=Genbank:WP_000147987.1;Name=WP_000147987.1;gbkey=CDS;gene=hyfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311374.1;locus_tag=AD08_RS09020;product=hydrogenase 4 membrane subunit;protein_id=WP_000147987.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 79161 80741 . + . ID=gene-AD08_RS09015;Name=hyfF;gbkey=Gene;gene=hyfF;gene_biotype=protein_coding;locus_tag=AD08_RS09015;old_locus_tag=AD08_2836 NZ_JHDJ01000162.1 Protein Homology CDS 79161 80741 . + 0 ID=cds-WP_024203283.1;Parent=gene-AD08_RS09015;Dbxref=Genbank:WP_024203283.1;Name=WP_024203283.1;gbkey=CDS;gene=hyfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416981.1;locus_tag=AD08_RS09015;product=hydrogenase 4 subunit F;protein_id=WP_024203283.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 80731 82398 . + . ID=gene-AD08_RS09010;Name=hyfG;gbkey=Gene;gene=hyfG;gene_biotype=protein_coding;locus_tag=AD08_RS09010;old_locus_tag=AD08_2837 NZ_JHDJ01000162.1 Protein Homology CDS 80731 82398 . + 0 ID=cds-WP_001102321.1;Parent=gene-AD08_RS09010;Dbxref=Genbank:WP_001102321.1;Name=WP_001102321.1;gbkey=CDS;gene=hyfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416982.1;locus_tag=AD08_RS09010;product=hydrogenase 4 catalytic subunit HyfG;protein_id=WP_001102321.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 82408 82953 . + . ID=gene-AD08_RS09005;Name=hyfH;gbkey=Gene;gene=hyfH;gene_biotype=protein_coding;locus_tag=AD08_RS09005;old_locus_tag=AD08_2838 NZ_JHDJ01000162.1 Protein Homology CDS 82408 82953 . + 0 ID=cds-WP_000916055.1;Parent=gene-AD08_RS09005;Dbxref=Genbank:WP_000916055.1;Name=WP_000916055.1;gbkey=CDS;gene=hyfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416983.1;locus_tag=AD08_RS09005;product=hydrogenase 4 subunit H;protein_id=WP_000916055.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 82950 83708 . + . ID=gene-AD08_RS09000;Name=hyfI;gbkey=Gene;gene=hyfI;gene_biotype=protein_coding;locus_tag=AD08_RS09000;old_locus_tag=AD08_2839 NZ_JHDJ01000162.1 Protein Homology CDS 82950 83708 . + 0 ID=cds-WP_000075558.1;Parent=gene-AD08_RS09000;Dbxref=Genbank:WP_000075558.1;Name=WP_000075558.1;gbkey=CDS;gene=hyfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416984.1;locus_tag=AD08_RS09000;product=hydrogenase 4 catalytic subunit HyfI;protein_id=WP_000075558.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 83701 84114 . + . ID=gene-AD08_RS08995;Name=hyfJ;gbkey=Gene;gene=hyfJ;gene_biotype=protein_coding;locus_tag=AD08_RS08995;old_locus_tag=AD08_2840 NZ_JHDJ01000162.1 Protein Homology CDS 83701 84114 . + 0 ID=cds-WP_032219078.1;Parent=gene-AD08_RS08995;Dbxref=Genbank:WP_032219078.1;Name=WP_032219078.1;gbkey=CDS;gene=hyfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416985.4;locus_tag=AD08_RS08995;product=hydrogenase 4 assembly chaperone HyfJ;protein_id=WP_032219078.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 84144 86156 . + . ID=gene-AD08_RS08990;Name=AD08_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08990;old_locus_tag=AD08_2841 NZ_JHDJ01000162.1 Protein Homology CDS 84144 86156 . + 0 ID=cds-WP_001251544.1;Parent=gene-AD08_RS08990;Dbxref=Genbank:WP_001251544.1;Name=WP_001251544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416986.4;locus_tag=AD08_RS08990;product=DNA-binding transcriptional regulator HyfR;protein_id=WP_001251544.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 86178 87026 . + . ID=gene-AD08_RS08985;Name=AD08_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08985;old_locus_tag=AD08_2842 NZ_JHDJ01000162.1 Protein Homology CDS 86178 87026 . + 0 ID=cds-WP_001244734.1;Parent=gene-AD08_RS08985;Dbxref=Genbank:WP_001244734.1;Name=WP_001244734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416987.1;locus_tag=AD08_RS08985;product=formate transporter;protein_id=WP_001244734.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 87064 88125 . - . ID=gene-AD08_RS08980;Name=AD08_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08980;old_locus_tag=AD08_2843 NZ_JHDJ01000162.1 Protein Homology CDS 87064 88125 . - 0 ID=cds-WP_000892044.1;Parent=gene-AD08_RS08980;Dbxref=Genbank:WP_000892044.1;Name=WP_000892044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311382.1;locus_tag=AD08_RS08980;product=AI-2E family transporter;protein_id=WP_000892044.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 88338 89801 . + . ID=gene-AD08_RS08975;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=AD08_RS08975;old_locus_tag=AD08_2844 NZ_JHDJ01000162.1 Protein Homology CDS 88338 89801 . + 0 ID=cds-WP_000489667.1;Parent=gene-AD08_RS08975;Dbxref=Genbank:WP_000489667.1;Name=WP_000489667.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416989.1;locus_tag=AD08_RS08975;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489667.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 89822 90181 . + . ID=gene-AD08_RS08970;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AD08_RS08970;old_locus_tag=AD08_2845 NZ_JHDJ01000162.1 Protein Homology CDS 89822 90181 . + 0 ID=cds-WP_000166446.1;Parent=gene-AD08_RS08970;Dbxref=Genbank:WP_000166446.1;Name=WP_000166446.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;gbkey=CDS;gene=arsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416990.1;locus_tag=AD08_RS08970;product=arsenate reductase (glutaredoxin);protein_id=WP_000166446.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 90319 91065 . - . ID=gene-AD08_RS08965;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=AD08_RS08965;old_locus_tag=AD08_2846 NZ_JHDJ01000162.1 Protein Homology CDS 90319 91065 . - 0 ID=cds-WP_000247065.1;Parent=gene-AD08_RS08965;Dbxref=Genbank:WP_000247065.1;Name=WP_000247065.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311385.1;locus_tag=AD08_RS08965;product=DnaA inactivator Hda;protein_id=WP_000247065.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 91115 92404 . - . ID=gene-AD08_RS08960;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=AD08_RS08960;old_locus_tag=AD08_2847 NZ_JHDJ01000162.1 Protein Homology CDS 91115 92404 . - 0 ID=cds-WP_000198328.1;Parent=gene-AD08_RS08960;Dbxref=Genbank:WP_000198328.1;Name=WP_000198328.1;gbkey=CDS;gene=uraA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311386.1;locus_tag=AD08_RS08960;product=uracil permease;protein_id=WP_000198328.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 92490 93116 . - . ID=gene-AD08_RS08955;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=AD08_RS08955;old_locus_tag=AD08_2848 NZ_JHDJ01000162.1 Protein Homology CDS 92490 93116 . - 0 ID=cds-WP_001295473.1;Parent=gene-AD08_RS08955;Dbxref=Genbank:WP_001295473.1;Name=WP_001295473.1;gbkey=CDS;gene=upp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=AD08_RS08955;product=uracil phosphoribosyltransferase;protein_id=WP_001295473.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 93441 94478 . + . ID=gene-AD08_RS08950;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=AD08_RS08950;old_locus_tag=AD08_2850 NZ_JHDJ01000162.1 Protein Homology CDS 93441 94478 . + 0 ID=cds-WP_001336050.1;Parent=gene-AD08_RS08950;Dbxref=Genbank:WP_001336050.1;Name=WP_001336050.1;gbkey=CDS;gene=purM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416994.1;locus_tag=AD08_RS08950;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_001336050.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 94478 95116 . + . ID=gene-AD08_RS08945;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=AD08_RS08945;old_locus_tag=AD08_2851 NZ_JHDJ01000162.1 Protein Homology CDS 94478 95116 . + 0 ID=cds-WP_001028612.1;Parent=gene-AD08_RS08945;Dbxref=Genbank:WP_001028612.1;Name=WP_001028612.1;gbkey=CDS;gene=purN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416995.1;locus_tag=AD08_RS08945;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028612.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq pseudogene 95288 97354 . + . ID=gene-AD08_RS0126370;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=pseudogene;locus_tag=AD08_RS0126370;pseudo=true NZ_JHDJ01000162.1 Protein Homology CDS 95288 97354 . + 0 ID=cds-AD08_RS0126370;Parent=gene-AD08_RS0126370;Note=internal stop;gbkey=CDS;gene=ppk1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311390.1;locus_tag=AD08_RS0126370;product=polyphosphate kinase 1;pseudo=true;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 97359 98900 . + . ID=gene-AD08_RS08940;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=AD08_RS08940;old_locus_tag=AD08_2854 NZ_JHDJ01000162.1 Protein Homology CDS 97359 98900 . + 0 ID=cds-WP_001121363.1;Parent=gene-AD08_RS08940;Dbxref=Genbank:WP_001121363.1;Name=WP_001121363.1;gbkey=CDS;gene=ppx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311391.1;locus_tag=AD08_RS08940;product=exopolyphosphatase;protein_id=WP_001121363.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 98939 101182 . - . ID=gene-AD08_RS08935;Name=pdeF;gbkey=Gene;gene=pdeF;gene_biotype=protein_coding;locus_tag=AD08_RS08935;old_locus_tag=AD08_2855 NZ_JHDJ01000162.1 Protein Homology CDS 98939 101182 . - 0 ID=cds-WP_000772731.1;Parent=gene-AD08_RS08935;Dbxref=Genbank:WP_000772731.1;Name=WP_000772731.1;gbkey=CDS;gene=pdeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416998.1;locus_tag=AD08_RS08935;product=cyclic-guanylate-specific phosphodiesterase PdeF;protein_id=WP_000772731.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 101364 101516 . - . ID=gene-AD08_RS08930;Name=AD08_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08930;old_locus_tag=AD08_2856 NZ_JHDJ01000162.1 Protein Homology CDS 101364 101516 . - 0 ID=cds-WP_000017552.1;Parent=gene-AD08_RS08930;Dbxref=Genbank:WP_000017552.1;Name=WP_000017552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439271.1;locus_tag=AD08_RS08930;product=hypothetical protein;protein_id=WP_000017552.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 101534 101725 . + . ID=gene-AD08_RS08925;Name=AD08_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08925;old_locus_tag=AD08_2857 NZ_JHDJ01000162.1 Protein Homology CDS 101534 101725 . + 0 ID=cds-WP_000076001.1;Parent=gene-AD08_RS08925;Dbxref=Genbank:WP_000076001.1;Name=WP_000076001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416999.1;locus_tag=AD08_RS08925;product=DUF2633 family protein;protein_id=WP_000076001.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 102036 102554 . + . ID=gene-AD08_RS08920;Name=AD08_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08920;old_locus_tag=AD08_2858 NZ_JHDJ01000162.1 Protein Homology CDS 102036 102554 . + 0 ID=cds-WP_001295476.1;Parent=gene-AD08_RS08920;Dbxref=Genbank:WP_001295476.1;Name=WP_001295476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417000.1;locus_tag=AD08_RS08920;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001295476.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 102570 103109 . + . ID=gene-AD08_RS08915;Name=AD08_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08915;old_locus_tag=AD08_2859 NZ_JHDJ01000162.1 Protein Homology CDS 102570 103109 . + 0 ID=cds-WP_000755173.1;Parent=gene-AD08_RS08915;Dbxref=Genbank:WP_000755173.1;Name=WP_000755173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417001.1;locus_tag=AD08_RS08915;product=DUF5384 family protein;protein_id=WP_000755173.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 103202 104779 . - . ID=gene-AD08_RS08910;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AD08_RS08910;old_locus_tag=AD08_2860 NZ_JHDJ01000162.1 Protein Homology CDS 103202 104779 . - 0 ID=cds-WP_000138270.1;Parent=gene-AD08_RS08910;Dbxref=Genbank:WP_000138270.1;Name=WP_000138270.1;gbkey=CDS;gene=guaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=AD08_RS08910;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138270.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 104848 106314 . - . ID=gene-AD08_RS08905;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=AD08_RS08905;old_locus_tag=AD08_2861 NZ_JHDJ01000162.1 Protein Homology CDS 104848 106314 . - 0 ID=cds-WP_001299507.1;Parent=gene-AD08_RS08905;Dbxref=Genbank:WP_001299507.1;Name=WP_001299507.1;gbkey=CDS;gene=guaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159092.1;locus_tag=AD08_RS08905;product=IMP dehydrogenase;protein_id=WP_001299507.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 106476 107846 . + . ID=gene-AD08_RS08900;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=AD08_RS08900;old_locus_tag=AD08_2863 NZ_JHDJ01000162.1 Protein Homology CDS 106476 107846 . + 0 ID=cds-WP_000937912.1;Parent=gene-AD08_RS08900;Dbxref=Genbank:WP_000937912.1;Name=WP_000937912.1;gbkey=CDS;gene=xseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417004.1;locus_tag=AD08_RS08900;product=exodeoxyribonuclease VII large subunit;protein_id=WP_000937912.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 107843 108058 . - . ID=gene-AD08_RS08895;Name=AD08_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08895;old_locus_tag=AD08_2864 NZ_JHDJ01000162.1 Protein Homology CDS 107843 108058 . - 0 ID=cds-WP_001301158.1;Parent=gene-AD08_RS08895;Dbxref=Genbank:WP_001301158.1;Name=WP_001301158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417005.2;locus_tag=AD08_RS08895;product=DUF1407 domain-containing protein;protein_id=WP_001301158.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 108128 109600 . - . ID=gene-AD08_RS08890;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=AD08_RS08890;old_locus_tag=AD08_2865 NZ_JHDJ01000162.1 Protein Homology CDS 108128 109600 . - 0 ID=cds-WP_000249410.1;Parent=gene-AD08_RS08890;Dbxref=Genbank:WP_000249410.1;Name=WP_000249410.1;gbkey=CDS;gene=der;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417006.2;locus_tag=AD08_RS08890;product=ribosome biogenesis GTPase Der;protein_id=WP_000249410.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 109718 110896 . - . ID=gene-AD08_RS08885;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=AD08_RS08885;old_locus_tag=AD08_2866 NZ_JHDJ01000162.1 Protein Homology CDS 109718 110896 . - 0 ID=cds-WP_001177048.1;Parent=gene-AD08_RS08885;Dbxref=Genbank:WP_001177048.1;Name=WP_001177048.1;gbkey=CDS;gene=bamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311401.1;locus_tag=AD08_RS08885;product=outer membrane protein assembly factor BamB;protein_id=WP_001177048.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 110907 111527 . - . ID=gene-AD08_RS08880;Name=AD08_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08880;old_locus_tag=AD08_2867 NZ_JHDJ01000162.1 Protein Homology CDS 110907 111527 . - 0 ID=cds-WP_000409205.1;Parent=gene-AD08_RS08880;Dbxref=Genbank:WP_000409205.1;Name=WP_000409205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417008.1;locus_tag=AD08_RS08880;product=ancillary SecYEG translocon subunit YfgM;protein_id=WP_000409205.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 111545 112819 . - . ID=gene-AD08_RS08875;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=AD08_RS08875;old_locus_tag=AD08_2868 NZ_JHDJ01000162.1 Protein Homology CDS 111545 112819 . - 0 ID=cds-WP_001107167.1;Parent=gene-AD08_RS08875;Dbxref=Genbank:WP_001107167.1;Name=WP_001107167.1;gbkey=CDS;gene=hisS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120428.1;locus_tag=AD08_RS08875;product=histidine--tRNA ligase;protein_id=WP_001107167.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 112930 114048 . - . ID=gene-AD08_RS08870;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=AD08_RS08870;old_locus_tag=AD08_2869 NZ_JHDJ01000162.1 Protein Homology CDS 112930 114048 . - 0 ID=cds-WP_000551807.1;Parent=gene-AD08_RS08870;Dbxref=Genbank:WP_000551807.1;Name=WP_000551807.1;gbkey=CDS;gene=ispG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311404.1;locus_tag=AD08_RS08870;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551807.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 114075 115088 . - . ID=gene-AD08_RS08865;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=AD08_RS08865;old_locus_tag=AD08_2870 NZ_JHDJ01000162.1 Protein Homology CDS 114075 115088 . - 0 ID=cds-WP_001090844.1;Parent=gene-AD08_RS08865;Dbxref=Genbank:WP_001090844.1;Name=WP_001090844.1;gbkey=CDS;gene=rodZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311405.1;locus_tag=AD08_RS08865;product=cytoskeleton protein RodZ;protein_id=WP_001090844.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 115373 116527 . - . ID=gene-AD08_RS08860;Name=trmG/rlmN;gbkey=Gene;gene=trmG/rlmN;gene_biotype=protein_coding;locus_tag=AD08_RS08860;old_locus_tag=AD08_2871 NZ_JHDJ01000162.1 Protein Homology CDS 115373 116527 . - 0 ID=cds-WP_000003317.1;Parent=gene-AD08_RS08860;Dbxref=Genbank:WP_000003317.1;Name=WP_000003317.1;gbkey=CDS;gene=trmG/rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417012.1;locus_tag=AD08_RS08860;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003317.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 116677 117108 . - . ID=gene-AD08_RS08855;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=AD08_RS08855;old_locus_tag=AD08_2872 NZ_JHDJ01000162.1 Protein Homology CDS 116677 117108 . - 0 ID=cds-WP_000963837.1;Parent=gene-AD08_RS08855;Dbxref=Genbank:WP_000963837.1;Name=WP_000963837.1;gbkey=CDS;gene=ndk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311407.1;locus_tag=AD08_RS08855;product=nucleoside-diphosphate kinase;protein_id=WP_000963837.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 117257 119569 . - . ID=gene-AD08_RS08850;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=AD08_RS08850;old_locus_tag=AD08_2873 NZ_JHDJ01000162.1 Protein Homology CDS 117257 119569 . - 0 ID=cds-WP_001137675.1;Parent=gene-AD08_RS08850;Dbxref=Genbank:WP_001137675.1;Name=WP_001137675.1;Note=penicillin-binding protein 1C;gbkey=CDS;gene=pbpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417014.1;locus_tag=AD08_RS08850;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_001137675.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 119570 124531 . - . ID=gene-AD08_RS08845;Name=yfhM;gbkey=Gene;gene=yfhM;gene_biotype=protein_coding;locus_tag=AD08_RS08845;old_locus_tag=AD08_2874 NZ_JHDJ01000162.1 Protein Homology CDS 119570 124531 . - 0 ID=cds-WP_032219089.1;Parent=gene-AD08_RS08845;Dbxref=Genbank:WP_032219089.1;Name=WP_032219089.1;gbkey=CDS;gene=yfhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417015.1;locus_tag=AD08_RS08845;product=alpha2-macroglobulin;protein_id=WP_032219089.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 124738 125583 . + . ID=gene-AD08_RS08840;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=AD08_RS08840;old_locus_tag=AD08_2875 NZ_JHDJ01000162.1 Protein Homology CDS 124738 125583 . + 0 ID=cds-WP_000108626.1;Parent=gene-AD08_RS08840;Dbxref=Genbank:WP_000108626.1;Name=WP_000108626.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417016.4;locus_tag=AD08_RS08840;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000108626.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 126401 127177 . - . ID=gene-AD08_RS08835;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=AD08_RS08835;old_locus_tag=AD08_2878 NZ_JHDJ01000162.1 Protein Homology CDS 126401 127177 . - 0 ID=cds-WP_001295479.1;Parent=gene-AD08_RS08835;Dbxref=Genbank:WP_001295479.1;Name=WP_001295479.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708361.2;locus_tag=AD08_RS08835;product=enhanced serine sensitivity protein SseB;protein_id=WP_001295479.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 127319 128602 . - . ID=gene-AD08_RS08830;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=AD08_RS08830;old_locus_tag=AD08_2879 NZ_JHDJ01000162.1 Protein Homology CDS 127319 128602 . - 0 ID=cds-WP_032219093.1;Parent=gene-AD08_RS08830;Dbxref=Genbank:WP_032219093.1;Name=WP_032219093.1;gbkey=CDS;gene=pepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417018.4;locus_tag=AD08_RS08830;product=aminopeptidase PepB;protein_id=WP_032219093.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 128780 128980 . - . ID=gene-AD08_RS08825;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=AD08_RS08825;old_locus_tag=AD08_2880 NZ_JHDJ01000162.1 Protein Homology CDS 128780 128980 . - 0 ID=cds-WP_000523616.1;Parent=gene-AD08_RS08825;Dbxref=Genbank:WP_000523616.1;Name=WP_000523616.1;gbkey=CDS;gene=iscX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=AD08_RS08825;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523616.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 128992 129327 . - . ID=gene-AD08_RS08820;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=AD08_RS08820;old_locus_tag=AD08_2881 NZ_JHDJ01000162.1 Protein Homology CDS 128992 129327 . - 0 ID=cds-WP_001479461.1;Parent=gene-AD08_RS08820;Dbxref=Genbank:WP_001479461.1;Name=WP_001479461.1;gbkey=CDS;gene=fdx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=AD08_RS08820;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001479461.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 129329 131179 . - . ID=gene-AD08_RS08815;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=AD08_RS08815;old_locus_tag=AD08_2882 NZ_JHDJ01000162.1 Protein Homology CDS 129329 131179 . - 0 ID=cds-WP_032219096.1;Parent=gene-AD08_RS08815;Dbxref=Genbank:WP_032219096.1;Name=WP_032219096.1;gbkey=CDS;gene=hscA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=AD08_RS08815;product=Fe-S protein assembly chaperone HscA;protein_id=WP_032219096.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 131196 131711 . - . ID=gene-AD08_RS08810;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=AD08_RS08810;old_locus_tag=AD08_2883 NZ_JHDJ01000162.1 Protein Homology CDS 131196 131711 . - 0 ID=cds-WP_000384413.1;Parent=gene-AD08_RS08810;Dbxref=Genbank:WP_000384413.1;Name=WP_000384413.1;gbkey=CDS;gene=hscB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131249.1;locus_tag=AD08_RS08810;product=co-chaperone HscB;protein_id=WP_000384413.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 131807 132130 . - . ID=gene-AD08_RS08805;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=AD08_RS08805;old_locus_tag=AD08_2885 NZ_JHDJ01000162.1 Protein Homology CDS 131807 132130 . - 0 ID=cds-WP_000028953.1;Parent=gene-AD08_RS08805;Dbxref=Genbank:WP_000028953.1;Name=WP_000028953.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373466.1;locus_tag=AD08_RS08805;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028953.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 132147 132533 . - . ID=gene-AD08_RS08800;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=AD08_RS08800;old_locus_tag=AD08_2886 NZ_JHDJ01000162.1 Protein Homology CDS 132147 132533 . - 0 ID=cds-WP_000331707.1;Parent=gene-AD08_RS08800;Dbxref=Genbank:WP_000331707.1;Name=WP_000331707.1;gbkey=CDS;gene=iscU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=AD08_RS08800;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331707.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 132561 133775 . - . ID=gene-AD08_RS08795;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=AD08_RS08795;old_locus_tag=AD08_2887 NZ_JHDJ01000162.1 Protein Homology CDS 132561 133775 . - 0 ID=cds-WP_001295373.1;Parent=gene-AD08_RS08795;Dbxref=Genbank:WP_001295373.1;Name=WP_001295373.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311423.2;locus_tag=AD08_RS08795;product=cysteine desulfurase;protein_id=WP_001295373.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 133887 134375 . - . ID=gene-AD08_RS08790;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=AD08_RS08790;old_locus_tag=AD08_2888 NZ_JHDJ01000162.1 Protein Homology CDS 133887 134375 . - 0 ID=cds-WP_001241357.1;Parent=gene-AD08_RS08790;Dbxref=Genbank:WP_001241357.1;Name=WP_001241357.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=AD08_RS08790;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241357.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 134736 135476 . - . ID=gene-AD08_RS08785;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=AD08_RS08785;old_locus_tag=AD08_2889 NZ_JHDJ01000162.1 Protein Homology CDS 134736 135476 . - 0 ID=cds-WP_000940019.1;Parent=gene-AD08_RS08785;Dbxref=Genbank:WP_000940019.1;Name=WP_000940019.1;gbkey=CDS;gene=trmJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417027.1;locus_tag=AD08_RS08785;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940019.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 135595 136398 . + . ID=gene-AD08_RS08780;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=AD08_RS08780;old_locus_tag=AD08_2890 NZ_JHDJ01000162.1 Protein Homology CDS 135595 136398 . + 0 ID=cds-WP_000553451.1;Parent=gene-AD08_RS08780;Dbxref=Genbank:WP_000553451.1;Name=WP_000553451.1;gbkey=CDS;gene=suhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=AD08_RS08780;product=inositol-1-monophosphatase;protein_id=WP_000553451.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 136543 137397 . + . ID=gene-AD08_RS08775;Name=AD08_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08775;old_locus_tag=AD08_2891 NZ_JHDJ01000162.1 Protein Homology CDS 136543 137397 . + 0 ID=cds-WP_001297705.1;Parent=gene-AD08_RS08775;Dbxref=Genbank:WP_001297705.1;Name=WP_001297705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417029.4;locus_tag=AD08_RS08775;product=alpha/beta hydrolase;protein_id=WP_001297705.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 137588 138868 . + . ID=gene-AD08_RS08770;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=AD08_RS08770;old_locus_tag=AD08_2892 NZ_JHDJ01000162.1 Protein Homology CDS 137588 138868 . + 0 ID=cds-WP_032219099.1;Parent=gene-AD08_RS08770;Dbxref=Genbank:WP_032219099.1;Name=WP_032219099.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417030.2;locus_tag=AD08_RS08770;product=stationary phase inducible protein CsiE;protein_id=WP_032219099.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 138860 139999 . - . ID=gene-AD08_RS08765;Name=AD08_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08765;old_locus_tag=AD08_2893 NZ_JHDJ01000162.1 Protein Homology CDS 138860 139999 . - 0 ID=cds-WP_001501346.1;Parent=gene-AD08_RS08765;Dbxref=Genbank:WP_001501346.1;Name=WP_001501346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417031.1;locus_tag=AD08_RS08765;product=3-phenylpropionate MFS transporter;protein_id=WP_001501346.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 140159 141049 . - . ID=gene-AD08_RS08760;Name=AD08_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08760;old_locus_tag=AD08_2894 NZ_JHDJ01000162.1 Protein Homology CDS 140159 141049 . - 0 ID=cds-WP_000423261.1;Parent=gene-AD08_RS08760;Dbxref=Genbank:WP_000423261.1;Name=WP_000423261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417032.1;locus_tag=AD08_RS08760;product=DNA-binding transcriptional regulator HcaR;protein_id=WP_000423261.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 141185 142546 . + . ID=gene-AD08_RS08755;Name=AD08_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08755;old_locus_tag=AD08_2895 NZ_JHDJ01000162.1 Protein Homology CDS 141185 142546 . + 0 ID=cds-WP_000211172.1;Parent=gene-AD08_RS08755;Dbxref=Genbank:WP_000211172.1;Name=WP_000211172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311431.1;locus_tag=AD08_RS08755;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_000211172.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 142543 143061 . + . ID=gene-AD08_RS08750;Name=AD08_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08750;old_locus_tag=AD08_2896 NZ_JHDJ01000162.1 Protein Homology CDS 142543 143061 . + 0 ID=cds-WP_001276072.1;Parent=gene-AD08_RS08750;Dbxref=Genbank:WP_001276072.1;Name=WP_001276072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417034.1;locus_tag=AD08_RS08750;product=3-phenylpropionate/cinnamic acid dioxygenase subunit beta;protein_id=WP_001276072.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 143061 143381 . + . ID=gene-AD08_RS08745;Name=AD08_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08745;old_locus_tag=AD08_2897 NZ_JHDJ01000162.1 Protein Homology CDS 143061 143381 . + 0 ID=cds-WP_001080102.1;Parent=gene-AD08_RS08745;Dbxref=Genbank:WP_001080102.1;Name=WP_001080102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311433.1;locus_tag=AD08_RS08745;product=bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit;protein_id=WP_001080102.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 143378 144190 . + . ID=gene-AD08_RS08740;Name=hcaB;gbkey=Gene;gene=hcaB;gene_biotype=protein_coding;locus_tag=AD08_RS08740;old_locus_tag=AD08_2898 NZ_JHDJ01000162.1 Protein Homology CDS 143378 144190 . + 0 ID=cds-WP_032219105.1;Parent=gene-AD08_RS08740;Dbxref=Genbank:WP_032219105.1;Name=WP_032219105.1;gbkey=CDS;gene=hcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417036.1;locus_tag=AD08_RS08740;product=3-(cis-5%2C6-dihydroxycyclohexa-1%2C3-dien-1-yl)propanoate dehydrogenase;protein_id=WP_032219105.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 144200 145402 . + . ID=gene-AD08_RS08735;Name=AD08_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08735;old_locus_tag=AD08_2899 NZ_JHDJ01000162.1 Protein Homology CDS 144200 145402 . + 0 ID=cds-WP_000660788.1;Parent=gene-AD08_RS08735;Dbxref=Genbank:WP_000660788.1;Name=WP_000660788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417037.1;locus_tag=AD08_RS08735;product=phenylpropionate dioxygenase ferredoxin reductase subunit;protein_id=WP_000660788.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 145499 145921 . + . ID=gene-AD08_RS08730;Name=AD08_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08730;old_locus_tag=AD08_2900 NZ_JHDJ01000162.1 Protein Homology CDS 145499 145921 . + 0 ID=cds-WP_001094726.1;Parent=gene-AD08_RS08730;Dbxref=Genbank:WP_001094726.1;Name=WP_001094726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417038.4;locus_tag=AD08_RS08730;product=DoxX family protein;protein_id=WP_001094726.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 145969 146841 . - . ID=gene-AD08_RS08725;Name=AD08_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08725;old_locus_tag=AD08_2901 NZ_JHDJ01000162.1 Protein Homology CDS 145969 146841 . - 0 ID=cds-WP_032219106.1;Parent=gene-AD08_RS08725;Dbxref=Genbank:WP_032219106.1;Name=WP_032219106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417039.1;locus_tag=AD08_RS08725;product=aldose 1-epimerase;protein_id=WP_032219106.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 146853 147947 . - . ID=gene-AD08_RS08720;Name=AD08_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08720;old_locus_tag=AD08_2902 NZ_JHDJ01000162.1 Protein Homology CDS 146853 147947 . - 0 ID=cds-WP_000700787.1;Parent=gene-AD08_RS08720;Dbxref=Genbank:WP_000700787.1;Name=WP_000700787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708383.1;locus_tag=AD08_RS08720;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_000700787.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 147980 148978 . - . ID=gene-AD08_RS08715;Name=AD08_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08715;old_locus_tag=AD08_2903 NZ_JHDJ01000162.1 Protein Homology CDS 147980 148978 . - 0 ID=cds-WP_001276670.1;Parent=gene-AD08_RS08715;Dbxref=Genbank:WP_001276670.1;Name=WP_001276670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417041.1;locus_tag=AD08_RS08715;product=ABC transporter permease;protein_id=WP_001276670.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 149003 150514 . - . ID=gene-AD08_RS08710;Name=AD08_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08710;old_locus_tag=AD08_2904 NZ_JHDJ01000162.1 Protein Homology CDS 149003 150514 . - 0 ID=cds-WP_032219108.1;Parent=gene-AD08_RS08710;Dbxref=Genbank:WP_032219108.1;Name=WP_032219108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417042.1;locus_tag=AD08_RS08710;product=sugar ABC transporter ATP-binding protein;protein_id=WP_032219108.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 150537 151520 . - . ID=gene-AD08_RS08705;Name=AD08_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08705;old_locus_tag=AD08_2905 NZ_JHDJ01000162.1 Protein Homology CDS 150537 151520 . - 0 ID=cds-WP_001142427.1;Parent=gene-AD08_RS08705;Dbxref=Genbank:WP_001142427.1;Name=WP_001142427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417043.1;locus_tag=AD08_RS08705;product=sugar ABC transporter substrate-binding protein;protein_id=WP_001142427.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 151617 154898 . - . ID=gene-AD08_RS08700;Name=AD08_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08700;old_locus_tag=AD08_2906 NZ_JHDJ01000162.1 Protein Homology CDS 151617 154898 . - 0 ID=cds-WP_032219109.1;Parent=gene-AD08_RS08700;Dbxref=Genbank:WP_032219109.1;Name=WP_032219109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417044.4;locus_tag=AD08_RS08700;product=DUF5107 domain-containing protein;protein_id=WP_032219109.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 155016 156209 . + . ID=gene-AD08_RS08695;Name=AD08_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08695;old_locus_tag=AD08_2907 NZ_JHDJ01000162.1 Protein Homology CDS 155016 156209 . + 0 ID=cds-WP_001200769.1;Parent=gene-AD08_RS08695;Dbxref=Genbank:WP_001200769.1;Name=WP_001200769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417045.4;locus_tag=AD08_RS08695;product=ROK family protein;protein_id=WP_001200769.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 156407 157660 . - . ID=gene-AD08_RS08690;Name=AD08_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08690;old_locus_tag=AD08_2908 NZ_JHDJ01000162.1 Protein Homology CDS 156407 157660 . - 0 ID=cds-WP_000919159.1;Parent=gene-AD08_RS08690;Dbxref=Genbank:WP_000919159.1;Name=WP_000919159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=AD08_RS08690;product=serine hydroxymethyltransferase;protein_id=WP_000919159.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 157988 159178 . + . ID=gene-AD08_RS08685;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=AD08_RS08685;old_locus_tag=AD08_2909 NZ_JHDJ01000162.1 Protein Homology CDS 157988 159178 . + 0 ID=cds-WP_000883122.1;Parent=gene-AD08_RS08685;Dbxref=Genbank:WP_000883122.1;Name=WP_000883122.1;gbkey=CDS;gene=hmpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417047.1;locus_tag=AD08_RS08685;product=NO-inducible flavohemoprotein;protein_id=WP_000883122.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 159223 159561 . - . ID=gene-AD08_RS08680;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=AD08_RS08680;old_locus_tag=AD08_2910 NZ_JHDJ01000162.1 Protein Homology CDS 159223 159561 . - 0 ID=cds-WP_000717694.1;Parent=gene-AD08_RS08680;Dbxref=Genbank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=AD08_RS08680;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 159622 160956 . - . ID=gene-AD08_RS08675;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=AD08_RS08675;old_locus_tag=AD08_2911 NZ_JHDJ01000162.1 Protein Homology CDS 159622 160956 . - 0 ID=cds-WP_001295369.1;Parent=gene-AD08_RS08675;Dbxref=Genbank:WP_001295369.1;Name=WP_001295369.1;gbkey=CDS;gene=glrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=AD08_RS08675;product=two-component system response regulator GlrR;protein_id=WP_001295369.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 160946 161659 . - . ID=gene-AD08_RS08670;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=AD08_RS08670;old_locus_tag=AD08_2912 NZ_JHDJ01000162.1 Protein Homology CDS 160946 161659 . - 0 ID=cds-WP_001215861.1;Parent=gene-AD08_RS08670;Dbxref=Genbank:WP_001215861.1;Name=WP_001215861.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311448.1;locus_tag=AD08_RS08670;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001215861.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 161824 163251 . - . ID=gene-AD08_RS08665;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=AD08_RS08665;old_locus_tag=AD08_2913 NZ_JHDJ01000162.1 Protein Homology CDS 161824 163251 . - 0 ID=cds-WP_001311037.1;Parent=gene-AD08_RS08665;Dbxref=Genbank:WP_001311037.1;Name=WP_001311037.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417051.2;locus_tag=AD08_RS08665;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_001311037.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 163809 167696 . - . ID=gene-AD08_RS08660;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=AD08_RS08660;old_locus_tag=AD08_2914 NZ_JHDJ01000162.1 Protein Homology CDS 163809 167696 . - 0 ID=cds-WP_000970102.1;Parent=gene-AD08_RS08660;Dbxref=Genbank:WP_000970102.1;Name=WP_000970102.1;gbkey=CDS;gene=purL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683423.1;locus_tag=AD08_RS08660;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_000970102.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 167954 169510 . + . ID=gene-AD08_RS08655;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=AD08_RS08655;old_locus_tag=AD08_2915 NZ_JHDJ01000162.1 Protein Homology CDS 167954 169510 . + 0 ID=cds-WP_000734212.1;Parent=gene-AD08_RS08655;Dbxref=Genbank:WP_000734212.1;Name=WP_000734212.1;gbkey=CDS;gene=mltF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417053.2;locus_tag=AD08_RS08655;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734212.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 169507 170043 . - . ID=gene-AD08_RS08650;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=AD08_RS08650;old_locus_tag=AD08_2916 NZ_JHDJ01000162.1 Protein Homology CDS 169507 170043 . - 0 ID=cds-WP_001295367.1;Parent=gene-AD08_RS08650;Dbxref=Genbank:WP_001295367.1;Name=WP_001295367.1;gbkey=CDS;gene=tadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708396.1;locus_tag=AD08_RS08650;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001295367.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 170068 170703 . - . ID=gene-AD08_RS08645;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=AD08_RS08645;old_locus_tag=AD08_2917 NZ_JHDJ01000162.1 Protein Homology CDS 170068 170703 . - 0 ID=cds-WP_000190655.1;Parent=gene-AD08_RS08645;Dbxref=Genbank:WP_000190655.1;Name=WP_000190655.1;gbkey=CDS;gene=yfhb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417055.4;locus_tag=AD08_RS08645;product=phosphatidylglycerophosphatase C;protein_id=WP_000190655.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 170912 171760 . + . ID=gene-AD08_RS08640;Name=AD08_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08640;old_locus_tag=AD08_2918 NZ_JHDJ01000162.1 Protein Homology CDS 170912 171760 . + 0 ID=cds-WP_001013779.1;Parent=gene-AD08_RS08640;Dbxref=Genbank:WP_001013779.1;Name=WP_001013779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417056.2;locus_tag=AD08_RS08640;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001013779.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 171816 172076 . + . ID=gene-AD08_RS0126375;Name=yfhL;gbkey=Gene;gene=yfhL;gene_biotype=protein_coding;locus_tag=AD08_RS0126375 NZ_JHDJ01000162.1 Protein Homology CDS 171816 172076 . + 0 ID=cds-WP_001196283.1;Parent=gene-AD08_RS0126375;Dbxref=Genbank:WP_001196283.1;Name=WP_001196283.1;gbkey=CDS;gene=yfhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417057.1;locus_tag=AD08_RS0126375;product=4Fe-4S dicluster ferredoxin YfhL;protein_id=WP_001196283.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 172270 172350 . - . ID=gene-AD08_RS0126380;Name=shoB;gbkey=Gene;gene=shoB;gene_biotype=protein_coding;locus_tag=AD08_RS0126380 NZ_JHDJ01000162.1 Protein Homology CDS 172270 172350 . - 0 ID=cds-WP_000128776.1;Parent=gene-AD08_RS0126380;Dbxref=Genbank:WP_000128776.1;Name=WP_000128776.1;gbkey=CDS;gene=shoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791251.1;locus_tag=AD08_RS0126380;product=type I toxin-antitoxin system toxin ShoB;protein_id=WP_000128776.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 172771 173151 . - . ID=gene-AD08_RS08635;Name=AD08_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08635;old_locus_tag=AD08_2920 NZ_JHDJ01000162.1 Protein Homology CDS 172771 173151 . - 0 ID=cds-WP_000986023.1;Parent=gene-AD08_RS08635;Dbxref=Genbank:WP_000986023.1;Name=WP_000986023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417058.1;locus_tag=AD08_RS08635;product=holo-[acyl-carrier-protein] synthase;protein_id=WP_000986023.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 173151 173882 . - . ID=gene-AD08_RS08630;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=AD08_RS08630;old_locus_tag=AD08_2921 NZ_JHDJ01000162.1 Protein Homology CDS 173151 173882 . - 0 ID=cds-WP_001297412.1;Parent=gene-AD08_RS08630;Dbxref=Genbank:WP_001297412.1;Name=WP_001297412.1;gbkey=CDS;gene=pdxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311457.1;locus_tag=AD08_RS08630;product=pyridoxine 5'-phosphate synthase;protein_id=WP_001297412.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 173894 174622 . - . ID=gene-AD08_RS08625;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AD08_RS08625;old_locus_tag=AD08_2922 NZ_JHDJ01000162.1 Protein Homology CDS 173894 174622 . - 0 ID=cds-WP_001742065.1;Parent=gene-AD08_RS08625;Dbxref=Genbank:WP_001742065.1;Name=WP_001742065.1;gbkey=CDS;gene=recO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311458.1;locus_tag=AD08_RS08625;product=DNA repair protein RecO;protein_id=WP_001742065.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 174634 175539 . - . ID=gene-AD08_RS08620;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=AD08_RS08620;old_locus_tag=AD08_2923 NZ_JHDJ01000162.1 Protein Homology CDS 174634 175539 . - 0 ID=cds-WP_000020749.1;Parent=gene-AD08_RS08620;Dbxref=Genbank:WP_000020749.1;Name=WP_000020749.1;gbkey=CDS;gene=era;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417061.1;locus_tag=AD08_RS08620;product=GTPase Era;protein_id=WP_000020749.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 175536 176216 . - . ID=gene-AD08_RS08615;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=AD08_RS08615;old_locus_tag=AD08_2924 NZ_JHDJ01000162.1 Protein Homology CDS 175536 176216 . - 0 ID=cds-WP_001068343.1;Parent=gene-AD08_RS08615;Dbxref=Genbank:WP_001068343.1;Name=WP_001068343.1;gbkey=CDS;gene=rnc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848606.1;locus_tag=AD08_RS08615;product=ribonuclease III;protein_id=WP_001068343.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 176488 177462 . - . ID=gene-AD08_RS08610;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=AD08_RS08610;old_locus_tag=AD08_2925 NZ_JHDJ01000162.1 Protein Homology CDS 176488 177462 . - 0 ID=cds-WP_000002541.1;Parent=gene-AD08_RS08610;Dbxref=Genbank:WP_000002541.1;Name=WP_000002541.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130326.1;locus_tag=AD08_RS08610;product=signal peptidase I;protein_id=WP_000002541.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 177478 179277 . - . ID=gene-AD08_RS08605;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=AD08_RS08605;old_locus_tag=AD08_2926 NZ_JHDJ01000162.1 Protein Homology CDS 177478 179277 . - 0 ID=cds-WP_000790168.1;Parent=gene-AD08_RS08605;Dbxref=Genbank:WP_000790168.1;Name=WP_000790168.1;gbkey=CDS;gene=lepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434076.1;locus_tag=AD08_RS08605;product=elongation factor 4;protein_id=WP_000790168.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 179475 179954 . - . ID=gene-AD08_RS08600;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=AD08_RS08600;old_locus_tag=AD08_2927 NZ_JHDJ01000162.1 Protein Homology CDS 179475 179954 . - 0 ID=cds-WP_000589068.1;Parent=gene-AD08_RS08600;Dbxref=Genbank:WP_000589068.1;Name=WP_000589068.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417065.1;locus_tag=AD08_RS08600;product=SoxR-reducing system protein RseC;protein_id=WP_000589068.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 179951 180907 . - . ID=gene-AD08_RS08595;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=AD08_RS08595;old_locus_tag=AD08_2928 NZ_JHDJ01000162.1 Protein Homology CDS 179951 180907 . - 0 ID=cds-WP_000812053.1;Parent=gene-AD08_RS08595;Dbxref=Genbank:WP_000812053.1;Name=WP_000812053.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311464.1;locus_tag=AD08_RS08595;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812053.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 180907 181557 . - . ID=gene-AD08_RS08590;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=AD08_RS08590;old_locus_tag=AD08_2929 NZ_JHDJ01000162.1 Protein Homology CDS 180907 181557 . - 0 ID=cds-WP_001168459.1;Parent=gene-AD08_RS08590;Dbxref=Genbank:WP_001168459.1;Name=WP_001168459.1;gbkey=CDS;gene=rseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417067.1;locus_tag=AD08_RS08590;product=anti-sigma-E factor RseA;protein_id=WP_001168459.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 181590 182165 . - . ID=gene-AD08_RS08585;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=AD08_RS08585;old_locus_tag=AD08_2930 NZ_JHDJ01000162.1 Protein Homology CDS 181590 182165 . - 0 ID=cds-WP_001295364.1;Parent=gene-AD08_RS08585;Dbxref=Genbank:WP_001295364.1;Name=WP_001295364.1;gbkey=CDS;gene=rpoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=AD08_RS08585;product=RNA polymerase sigma factor RpoE;protein_id=WP_001295364.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 182162 182317 . - . ID=gene-AD08_RS31735;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=AD08_RS31735 NZ_JHDJ01000162.1 Protein Homology CDS 182162 182317 . - 0 ID=cds-WP_001303621.1;Parent=gene-AD08_RS31735;Dbxref=Genbank:WP_001303621.1;Name=WP_001303621.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518806.1;locus_tag=AD08_RS31735;product=rpoE leader peptide RseD;protein_id=WP_001303621.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 182573 184195 . + . ID=gene-AD08_RS08580;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=AD08_RS08580;old_locus_tag=AD08_2931 NZ_JHDJ01000162.1 Protein Homology CDS 182573 184195 . + 0 ID=cds-WP_001094491.1;Parent=gene-AD08_RS08580;Dbxref=Genbank:WP_001094491.1;Name=WP_001094491.1;gbkey=CDS;gene=nadB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417069.1;locus_tag=AD08_RS08580;product=L-aspartate oxidase;protein_id=WP_001094491.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 184180 184917 . - . ID=gene-AD08_RS08575;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=AD08_RS08575;old_locus_tag=AD08_2932 NZ_JHDJ01000162.1 Protein Homology CDS 184180 184917 . - 0 ID=cds-WP_001295363.1;Parent=gene-AD08_RS08575;Dbxref=Genbank:WP_001295363.1;Name=WP_001295363.1;gbkey=CDS;gene=trmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417070.2;locus_tag=AD08_RS08575;product=tRNA (adenosine(37)-N6)-methyltransferase TrmM;protein_id=WP_001295363.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 185049 186383 . + . ID=gene-AD08_RS08570;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=AD08_RS08570;old_locus_tag=AD08_2933 NZ_JHDJ01000162.1 Protein Homology CDS 185049 186383 . + 0 ID=cds-WP_000219193.1;Parent=gene-AD08_RS08570;Dbxref=Genbank:WP_000219193.1;Name=WP_000219193.1;gbkey=CDS;gene=srmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311469.1;locus_tag=AD08_RS08570;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219193.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 186592 187473 . - . ID=gene-AD08_RS08565;Name=AD08_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08565;old_locus_tag=AD08_2934 NZ_JHDJ01000162.1 Protein Homology CDS 186592 187473 . - 0 ID=cds-WP_001300638.1;Parent=gene-AD08_RS08565;Dbxref=Genbank:WP_001300638.1;Name=WP_001300638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417072.4;locus_tag=AD08_RS08565;product=LysR family transcriptional regulator;protein_id=WP_001300638.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 187576 188163 . + . ID=gene-AD08_RS08560;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=AD08_RS08560;old_locus_tag=AD08_2935 NZ_JHDJ01000162.1 Protein Homology CDS 187576 188163 . + 0 ID=cds-WP_000189207.1;Parent=gene-AD08_RS08560;Dbxref=Genbank:WP_000189207.1;Name=WP_000189207.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417073.1;locus_tag=AD08_RS08560;product=cysteine/O-acetylserine transporter;protein_id=WP_000189207.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 188219 188602 . - . ID=gene-AD08_RS08555;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=AD08_RS08555;old_locus_tag=AD08_2936 NZ_JHDJ01000162.1 Protein Homology CDS 188219 188602 . - 0 ID=cds-WP_000627807.1;Parent=gene-AD08_RS08555;Dbxref=Genbank:WP_000627807.1;Name=WP_000627807.1;gbkey=CDS;gene=grcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311472.1;locus_tag=AD08_RS08555;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627807.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 188907 189596 . + . ID=gene-AD08_RS08550;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=AD08_RS08550;old_locus_tag=AD08_2937 NZ_JHDJ01000162.1 Protein Homology CDS 188907 189596 . + 0 ID=cds-WP_001262716.1;Parent=gene-AD08_RS08550;Dbxref=Genbank:WP_001262716.1;Name=WP_001262716.1;gbkey=CDS;gene=ung;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417075.1;locus_tag=AD08_RS08550;product=uracil-DNA glycosylase;protein_id=WP_001262716.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 189644 190681 . - . ID=gene-AD08_RS08545;Name=AD08_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08545;old_locus_tag=AD08_2938 NZ_JHDJ01000162.1 Protein Homology CDS 189644 190681 . - 0 ID=cds-WP_000997403.1;Parent=gene-AD08_RS08545;Dbxref=Genbank:WP_000997403.1;Name=WP_000997403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311474.1;locus_tag=AD08_RS08545;product=tRNA/rRNA methyltransferase;protein_id=WP_000997403.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 190888 191307 . + . ID=gene-AD08_RS08540;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=AD08_RS08540;old_locus_tag=AD08_2939 NZ_JHDJ01000162.1 Protein Homology CDS 190888 191307 . + 0 ID=cds-WP_001098726.1;Parent=gene-AD08_RS08540;Dbxref=Genbank:WP_001098726.1;Name=WP_001098726.1;gbkey=CDS;gene=trxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311475.1;locus_tag=AD08_RS08540;product=thioredoxin TrxC;protein_id=WP_001098726.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 191376 192074 . + . ID=gene-AD08_RS08535;Name=AD08_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08535;old_locus_tag=AD08_2940 NZ_JHDJ01000162.1 Protein Homology CDS 191376 192074 . + 0 ID=cds-WP_001300438.1;Parent=gene-AD08_RS08535;Dbxref=Genbank:WP_001300438.1;Name=WP_001300438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417078.4;locus_tag=AD08_RS08535;product=DTW domain-containing protein;protein_id=WP_001300438.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 192106 194766 . + . ID=gene-AD08_RS08530;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=AD08_RS08530;old_locus_tag=AD08_2941 NZ_JHDJ01000162.1 Protein Homology CDS 192106 194766 . + 0 ID=cds-WP_000083005.1;Parent=gene-AD08_RS08530;Dbxref=Genbank:WP_000083005.1;Name=WP_000083005.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417079.1;locus_tag=AD08_RS08530;product=protein lysine acetyltransferase;protein_id=WP_000083005.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 194880 196235 . + . ID=gene-AD08_RS08525;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AD08_RS08525;old_locus_tag=AD08_2942 NZ_JHDJ01000162.1 Protein Homology CDS 194880 196235 . + 0 ID=cds-WP_000949265.1;Parent=gene-AD08_RS08525;Dbxref=Genbank:WP_000949265.1;Name=WP_000949265.1;gbkey=CDS;gene=pssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=AD08_RS08525;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949265.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 196260 196604 . + . ID=gene-AD08_RS08520;Name=AD08_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08520;old_locus_tag=AD08_2943 NZ_JHDJ01000162.1 Protein Homology CDS 196260 196604 . + 0 ID=cds-WP_000464877.1;Parent=gene-AD08_RS08520;Dbxref=Genbank:WP_000464877.1;Name=WP_000464877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708437.3;locus_tag=AD08_RS08520;product=YfiM family lipoprotein;protein_id=WP_000464877.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 196601 197899 . - . ID=gene-AD08_RS08515;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=AD08_RS08515;old_locus_tag=AD08_2944 NZ_JHDJ01000162.1 Protein Homology CDS 196601 197899 . - 0 ID=cds-WP_000841103.1;Parent=gene-AD08_RS08515;Dbxref=Genbank:WP_000841103.1;Name=WP_000841103.1;gbkey=CDS;gene=kgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417082.1;locus_tag=AD08_RS08515;product=alpha-ketoglutarate permease;protein_id=WP_000841103.1;transl_table=11 NZ_JHDJ01000162.1 RefSeq gene 198225 198340 . - . ID=gene-AD08_RS08510;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD08_RS08510;old_locus_tag=AD08_2945 NZ_JHDJ01000162.1 cmsearch rRNA 198225 198340 . - . ID=rna-AD08_RS08510;Parent=gene-AD08_RS08510;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS08510;product=5S ribosomal RNA NZ_JHDJ01000162.1 cmsearch exon 198225 198340 . - . ID=exon-AD08_RS08510-1;Parent=rna-AD08_RS08510;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS08510;product=5S ribosomal RNA NZ_JHDJ01000162.1 RefSeq gene 198418 199439 . - . ID=gene-AD08_RS08505;Name=AD08_RS08505;end_range=199439,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS08505;old_locus_tag=AD08_2946;partial=true NZ_JHDJ01000162.1 RefSeq rRNA 198418 199439 . - . ID=rna-AD08_RS08505;Parent=gene-AD08_RS08505;end_range=199439,.;gbkey=rRNA;locus_tag=AD08_RS08505;partial=true;product=23S ribosomal RNA NZ_JHDJ01000162.1 RefSeq exon 198418 199439 . - . ID=exon-AD08_RS08505-1;Parent=rna-AD08_RS08505;end_range=199439,.;gbkey=rRNA;locus_tag=AD08_RS08505;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JHDJ01000163.1 1 9199 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000163.1 RefSeq region 1 9199 . + . ID=NZ_JHDJ01000163.1:1..9199;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000163.1 RefSeq gene 1 168 . - . ID=gene-AD08_RS0126425;Name=AD08_RS0126425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126425;partial=true;start_range=.,1 NZ_JHDJ01000163.1 Protein Homology CDS 1 168 . - 0 ID=cds-WP_001397259.1;Parent=gene-AD08_RS0126425;Dbxref=Genbank:WP_001397259.1;Name=WP_001397259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS0126425;partial=true;product=InsA protein;protein_id=WP_001397259.1;start_range=.,1;transl_table=11 NZ_JHDJ01000163.1 RefSeq gene 290 1984 . - . ID=gene-AD08_RS08500;Name=AD08_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08500;old_locus_tag=AD08_2948 NZ_JHDJ01000163.1 Protein Homology CDS 290 1984 . - 0 ID=cds-WP_000482665.1;Parent=gene-AD08_RS08500;Dbxref=Genbank:WP_000482665.1;Name=WP_000482665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000482663.1;locus_tag=AD08_RS08500;product=flotillin family protein;protein_id=WP_000482665.1;transl_table=11 NZ_JHDJ01000163.1 RefSeq gene 2011 2631 . - . ID=gene-AD08_RS08495;Name=AD08_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08495;old_locus_tag=AD08_2949 NZ_JHDJ01000163.1 Protein Homology CDS 2011 2631 . - 0 ID=cds-WP_000176497.1;Parent=gene-AD08_RS08495;Dbxref=Genbank:WP_000176497.1;Name=WP_000176497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176498.1;locus_tag=AD08_RS08495;product=YqiJ family protein;protein_id=WP_000176497.1;transl_table=11 NZ_JHDJ01000163.1 RefSeq gene 2898 3563 . - . ID=gene-AD08_RS08490;Name=AD08_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08490;old_locus_tag=AD08_2950 NZ_JHDJ01000163.1 Protein Homology CDS 2898 3563 . - 0 ID=cds-WP_000154140.1;Parent=gene-AD08_RS08490;Dbxref=Genbank:WP_000154140.1;Name=WP_000154140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000154135.1;locus_tag=AD08_RS08490;product=hypothetical protein;protein_id=WP_000154140.1;transl_table=11 NZ_JHDJ01000163.1 RefSeq gene 3704 4345 . - . ID=gene-AD08_RS08485;Name=AD08_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08485;old_locus_tag=AD08_2951 NZ_JHDJ01000163.1 Protein Homology CDS 3704 4345 . - 0 ID=cds-WP_000335849.1;Parent=gene-AD08_RS08485;Dbxref=Genbank:WP_000335849.1;Name=WP_000335849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000335849.1;locus_tag=AD08_RS08485;product=transcription termination factor NusG;protein_id=WP_000335849.1;transl_table=11 NZ_JHDJ01000163.1 RefSeq gene 5056 5925 . + . ID=gene-AD08_RS08480;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AD08_RS08480;old_locus_tag=AD08_2952 NZ_JHDJ01000163.1 Protein Homology CDS 5056 5925 . + 0 ID=cds-WP_077699031.1;Parent=gene-AD08_RS08480;Dbxref=Genbank:WP_077699031.1;Name=WP_077699031.1;gbkey=CDS;gene=repA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AD08_RS08480;product=incFII family plasmid replication initiator RepA;protein_id=WP_077699031.1;transl_table=11 NZ_JHDJ01000163.1 RefSeq gene 6824 7108 . + . ID=gene-AD08_RS08475;Name=AD08_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08475;old_locus_tag=AD08_2953 NZ_JHDJ01000163.1 Protein Homology CDS 6824 7108 . + 0 ID=cds-WP_001178089.1;Parent=gene-AD08_RS08475;Dbxref=Genbank:WP_001178089.1;Name=WP_001178089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052676.1;locus_tag=AD08_RS08475;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_001178089.1;transl_table=11 NZ_JHDJ01000163.1 RefSeq gene 7108 7386 . + . ID=gene-AD08_RS08470;Name=AD08_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08470;old_locus_tag=AD08_2954 NZ_JHDJ01000163.1 Protein Homology CDS 7108 7386 . + 0 ID=cds-WP_032219132.1;Parent=gene-AD08_RS08470;Dbxref=Genbank:WP_032219132.1;Name=WP_032219132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052677.1;locus_tag=AD08_RS08470;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_032219132.1;transl_table=11 NZ_JHDJ01000163.1 RefSeq gene 7559 8746 . - . ID=gene-AD08_RS08465;Name=AD08_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08465;old_locus_tag=AD08_2955 NZ_JHDJ01000163.1 Protein Homology CDS 7559 8746 . - 0 ID=cds-WP_032217558.1-5;Parent=gene-AD08_RS08465;Dbxref=Genbank:WP_032217558.1;Name=WP_032217558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013747467.1;locus_tag=AD08_RS08465;product=IS91 family transposase;protein_id=WP_032217558.1;transl_table=11 NZ_JHDJ01000163.1 RefSeq gene 8746 9111 . - . ID=gene-AD08_RS0126430;Name=AD08_RS0126430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126430 NZ_JHDJ01000163.1 GeneMarkS-2+ CDS 8746 9111 . - 0 ID=cds-WP_000124094.1-6;Parent=gene-AD08_RS0126430;Dbxref=Genbank:WP_000124094.1;Name=WP_000124094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS0126430;product=hypothetical protein;protein_id=WP_000124094.1;transl_table=11 ##sequence-region NZ_JHDJ01000164.1 1 2698 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000164.1 RefSeq region 1 2698 . + . ID=NZ_JHDJ01000164.1:1..2698;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000164.1 RefSeq gene 1 1205 . + . ID=gene-AD08_RS0126435;Name=AD08_RS0126435;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS0126435;partial=true;start_range=.,1 NZ_JHDJ01000164.1 RefSeq rRNA 1 1205 . + . ID=rna-AD08_RS0126435;Parent=gene-AD08_RS0126435;gbkey=rRNA;locus_tag=AD08_RS0126435;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDJ01000164.1 RefSeq exon 1 1205 . + . ID=exon-AD08_RS0126435-1;Parent=rna-AD08_RS0126435;gbkey=rRNA;locus_tag=AD08_RS0126435;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDJ01000164.1 RefSeq gene 1262 1338 . + . ID=gene-AD08_RS08460;Name=AD08_RS08460;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS08460;old_locus_tag=AD08_2958 NZ_JHDJ01000164.1 tRNAscan-SE tRNA 1262 1338 . + . ID=rna-AD08_RS08460;Parent=gene-AD08_RS08460;anticodon=(pos:1296..1298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08460;product=tRNA-Ile NZ_JHDJ01000164.1 tRNAscan-SE exon 1262 1338 . + . ID=exon-AD08_RS08460-1;Parent=rna-AD08_RS08460;anticodon=(pos:1296..1298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08460;product=tRNA-Ile NZ_JHDJ01000164.1 RefSeq gene 1381 1456 . + . ID=gene-AD08_RS08455;Name=AD08_RS08455;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS08455;old_locus_tag=AD08_2959 NZ_JHDJ01000164.1 tRNAscan-SE tRNA 1381 1456 . + . ID=rna-AD08_RS08455;Parent=gene-AD08_RS08455;anticodon=(pos:1414..1416);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08455;product=tRNA-Ala NZ_JHDJ01000164.1 tRNAscan-SE exon 1381 1456 . + . ID=exon-AD08_RS08455-1;Parent=rna-AD08_RS08455;anticodon=(pos:1414..1416);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08455;product=tRNA-Ala NZ_JHDJ01000164.1 RefSeq gene 1631 2698 . + . ID=gene-AD08_RS0126440;Name=AD08_RS0126440;end_range=2698,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS0126440;partial=true NZ_JHDJ01000164.1 RefSeq rRNA 1631 2698 . + . ID=rna-AD08_RS0126440;Parent=gene-AD08_RS0126440;end_range=2698,.;gbkey=rRNA;locus_tag=AD08_RS0126440;partial=true;product=23S ribosomal RNA NZ_JHDJ01000164.1 RefSeq exon 1631 2698 . + . ID=exon-AD08_RS0126440-1;Parent=rna-AD08_RS0126440;end_range=2698,.;gbkey=rRNA;locus_tag=AD08_RS0126440;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JHDJ01000165.1 1 30327 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000165.1 RefSeq region 1 30327 . + . ID=NZ_JHDJ01000165.1:1..30327;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000165.1 RefSeq gene 1 534 . - . ID=gene-AD08_RS0126445;Name=AD08_RS0126445;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS0126445;partial=true;start_range=.,1 NZ_JHDJ01000165.1 RefSeq rRNA 1 534 . - . ID=rna-AD08_RS0126445;Parent=gene-AD08_RS0126445;gbkey=rRNA;locus_tag=AD08_RS0126445;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDJ01000165.1 RefSeq exon 1 534 . - . ID=exon-AD08_RS0126445-1;Parent=rna-AD08_RS0126445;gbkey=rRNA;locus_tag=AD08_RS0126445;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDJ01000165.1 RefSeq gene 977 3550 . - . ID=gene-AD08_RS08450;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=AD08_RS08450;old_locus_tag=AD08_2960 NZ_JHDJ01000165.1 Protein Homology CDS 977 3550 . - 0 ID=cds-WP_001235102.1;Parent=gene-AD08_RS08450;Dbxref=Genbank:WP_001235102.1;Name=WP_001235102.1;gbkey=CDS;gene=clpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=AD08_RS08450;product=ATP-dependent chaperone ClpB;protein_id=WP_001235102.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 3680 4411 . - . ID=gene-AD08_RS08445;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=AD08_RS08445;old_locus_tag=AD08_2961 NZ_JHDJ01000165.1 Protein Homology CDS 3680 4411 . - 0 ID=cds-WP_000040169.1;Parent=gene-AD08_RS08445;Dbxref=Genbank:WP_000040169.1;Name=WP_000040169.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417084.1;locus_tag=AD08_RS08445;product=polyphenol oxidase;protein_id=WP_000040169.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 4408 5388 . - . ID=gene-AD08_RS08440;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=AD08_RS08440;old_locus_tag=AD08_2962 NZ_JHDJ01000165.1 Protein Homology CDS 4408 5388 . - 0 ID=cds-WP_000079100.1;Parent=gene-AD08_RS08440;Dbxref=Genbank:WP_000079100.1;Name=WP_000079100.1;gbkey=CDS;gene=rluD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=AD08_RS08440;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079100.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 5523 6260 . + . ID=gene-AD08_RS08435;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=AD08_RS08435;old_locus_tag=AD08_2963 NZ_JHDJ01000165.1 Protein Homology CDS 5523 6260 . + 0 ID=cds-WP_000197686.1;Parent=gene-AD08_RS08435;Dbxref=Genbank:WP_000197686.1;Name=WP_000197686.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311485.1;locus_tag=AD08_RS08435;product=outer membrane protein assembly factor BamD;protein_id=WP_000197686.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 6531 6872 . + . ID=gene-AD08_RS08430;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=AD08_RS08430;old_locus_tag=AD08_2964 NZ_JHDJ01000165.1 Protein Homology CDS 6531 6872 . + 0 ID=cds-WP_000178456.1;Parent=gene-AD08_RS08430;Dbxref=Genbank:WP_000178456.1;Name=WP_000178456.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311487.1;locus_tag=AD08_RS08430;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178456.1;transl_table=11 NZ_JHDJ01000165.1 cmsearch sequence_feature 6975 7100 . + . ID=id-NZ_JHDJ01000165.1:6975..7100;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_JHDJ01000165.1 RefSeq gene 6976 7023 . + . ID=gene-AD08_RS31275;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=AD08_RS31275 NZ_JHDJ01000165.1 Protein Homology CDS 6976 7023 . + 0 ID=cds-WP_010723158.1;Parent=gene-AD08_RS31275;Dbxref=Genbank:WP_010723158.1;Name=WP_010723158.1;gbkey=CDS;gene=pheL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417089.1;locus_tag=AD08_RS31275;product=phe operon leader peptide;protein_id=WP_010723158.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 7122 8282 . + . ID=gene-AD08_RS08425;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=AD08_RS08425;old_locus_tag=AD08_2965 NZ_JHDJ01000165.1 Protein Homology CDS 7122 8282 . + 0 ID=cds-WP_032219140.1;Parent=gene-AD08_RS08425;Dbxref=Genbank:WP_032219140.1;Name=WP_032219140.1;gbkey=CDS;gene=pheA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311489.1;locus_tag=AD08_RS08425;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_032219140.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 8325 9446 . - . ID=gene-AD08_RS08420;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=AD08_RS08420;old_locus_tag=AD08_2966 NZ_JHDJ01000165.1 Protein Homology CDS 8325 9446 . - 0 ID=cds-WP_000225229.1;Parent=gene-AD08_RS08420;Dbxref=Genbank:WP_000225229.1;Name=WP_000225229.1;gbkey=CDS;gene=tyrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417091.1;locus_tag=AD08_RS08420;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225229.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 9457 10527 . - . ID=gene-AD08_RS08415;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=AD08_RS08415;old_locus_tag=AD08_2967 NZ_JHDJ01000165.1 Protein Homology CDS 9457 10527 . - 0 ID=cds-WP_001168037.1;Parent=gene-AD08_RS08415;Dbxref=Genbank:WP_001168037.1;Name=WP_001168037.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417092.1;locus_tag=AD08_RS08415;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168037.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 10737 11102 . + . ID=gene-AD08_RS08410;Name=AD08_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08410;old_locus_tag=AD08_2968 NZ_JHDJ01000165.1 Protein Homology CDS 10737 11102 . + 0 ID=cds-WP_000976004.1;Parent=gene-AD08_RS08410;Dbxref=Genbank:WP_000976004.1;Name=WP_000976004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417093.2;locus_tag=AD08_RS08410;product=DUF2799 domain-containing protein;protein_id=WP_000976004.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 11252 11770 . + . ID=gene-AD08_RS08405;Name=AD08_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08405;old_locus_tag=AD08_2969 NZ_JHDJ01000165.1 Protein Homology CDS 11252 11770 . + 0 ID=cds-WP_001212391.1;Parent=gene-AD08_RS08405;Dbxref=Genbank:WP_001212391.1;Name=WP_001212391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311493.1;locus_tag=AD08_RS08405;product=YfiR family protein;protein_id=WP_001212391.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 11760 12986 . + . ID=gene-AD08_RS08400;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=AD08_RS08400;old_locus_tag=AD08_2970 NZ_JHDJ01000165.1 Protein Homology CDS 11760 12986 . + 0 ID=cds-WP_021351676.1;Parent=gene-AD08_RS08400;Dbxref=Genbank:WP_021351676.1;Name=WP_021351676.1;gbkey=CDS;gene=dgcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417095.1;locus_tag=AD08_RS08400;product=diguanylate cyclase DgcN;protein_id=WP_021351676.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 13002 13484 . + . ID=gene-AD08_RS0126455;Name=AD08_RS0126455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126455 NZ_JHDJ01000165.1 Protein Homology CDS 13002 13484 . + 0 ID=cds-WP_032219143.1;Parent=gene-AD08_RS0126455;Dbxref=Genbank:WP_032219143.1;Name=WP_032219143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417096.1;locus_tag=AD08_RS0126455;product=OmpA family protein;protein_id=WP_032219143.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 13560 13907 . - . ID=gene-AD08_RS08395;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=AD08_RS08395;old_locus_tag=AD08_2972 NZ_JHDJ01000165.1 Protein Homology CDS 13560 13907 . - 0 ID=cds-WP_000065253.1;Parent=gene-AD08_RS08395;Dbxref=Genbank:WP_000065253.1;Name=WP_000065253.1;gbkey=CDS;gene=rplS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=AD08_RS08395;product=50S ribosomal protein L19;protein_id=WP_000065253.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 13949 14716 . - . ID=gene-AD08_RS08390;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AD08_RS08390;old_locus_tag=AD08_2973 NZ_JHDJ01000165.1 Protein Homology CDS 13949 14716 . - 0 ID=cds-WP_000264777.1;Parent=gene-AD08_RS08390;Dbxref=Genbank:WP_000264777.1;Name=WP_000264777.1;gbkey=CDS;gene=trmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311497.1;locus_tag=AD08_RS08390;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000264777.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 14747 15295 . - . ID=gene-AD08_RS08385;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AD08_RS08385;old_locus_tag=AD08_2974 NZ_JHDJ01000165.1 Protein Homology CDS 14747 15295 . - 0 ID=cds-WP_000043335.1;Parent=gene-AD08_RS08385;Dbxref=Genbank:WP_000043335.1;Name=WP_000043335.1;gbkey=CDS;gene=rimM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=AD08_RS08385;product=ribosome maturation factor RimM;protein_id=WP_000043335.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 15314 15562 . - . ID=gene-AD08_RS08380;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AD08_RS08380;old_locus_tag=AD08_2975 NZ_JHDJ01000165.1 Protein Homology CDS 15314 15562 . - 0 ID=cds-WP_000256450.1;Parent=gene-AD08_RS08380;Dbxref=Genbank:WP_000256450.1;Name=WP_000256450.1;gbkey=CDS;gene=rpsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311499.1;locus_tag=AD08_RS08380;product=30S ribosomal protein S16;protein_id=WP_000256450.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 15811 17172 . - . ID=gene-AD08_RS08375;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=AD08_RS08375;old_locus_tag=AD08_2976 NZ_JHDJ01000165.1 Protein Homology CDS 15811 17172 . - 0 ID=cds-WP_000460035.1;Parent=gene-AD08_RS08375;Dbxref=Genbank:WP_000460035.1;Name=WP_000460035.1;gbkey=CDS;gene=ffh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=AD08_RS08375;product=signal recognition particle protein;protein_id=WP_000460035.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 17264 18130 . + . ID=gene-AD08_RS08370;Name=AD08_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08370;old_locus_tag=AD08_2977 NZ_JHDJ01000165.1 Protein Homology CDS 17264 18130 . + 0 ID=cds-WP_001189257.1;Parent=gene-AD08_RS08370;Dbxref=Genbank:WP_001189257.1;Name=WP_001189257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311501.3;locus_tag=AD08_RS08370;product=inner membrane protein YpjD;protein_id=WP_001189257.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 18151 19437 . + . ID=gene-AD08_RS08365;Name=AD08_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08365;old_locus_tag=AD08_2978 NZ_JHDJ01000165.1 Protein Homology CDS 18151 19437 . + 0 ID=cds-WP_010723175.1;Parent=gene-AD08_RS08365;Dbxref=Genbank:WP_010723175.1;Name=WP_010723175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=AD08_RS08365;product=HlyC/CorC family transporter;protein_id=WP_010723175.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 19492 20085 . - . ID=gene-AD08_RS08360;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=AD08_RS08360;old_locus_tag=AD08_2979 NZ_JHDJ01000165.1 Protein Homology CDS 19492 20085 . - 0 ID=cds-WP_001296310.1;Parent=gene-AD08_RS08360;Dbxref=Genbank:WP_001296310.1;Name=WP_001296310.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311503.1;locus_tag=AD08_RS08360;product=nucleotide exchange factor GrpE;protein_id=WP_001296310.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 20208 21086 . + . ID=gene-AD08_RS08355;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=AD08_RS08355;old_locus_tag=AD08_2981 NZ_JHDJ01000165.1 Protein Homology CDS 20208 21086 . + 0 ID=cds-WP_001059169.1;Parent=gene-AD08_RS08355;Dbxref=Genbank:WP_001059169.1;Name=WP_001059169.1;gbkey=CDS;gene=nadK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=AD08_RS08355;product=NAD(+) kinase;protein_id=WP_001059169.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 21172 22833 . + . ID=gene-AD08_RS08350;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=AD08_RS08350;old_locus_tag=AD08_2982 NZ_JHDJ01000165.1 Protein Homology CDS 21172 22833 . + 0 ID=cds-WP_000880910.1;Parent=gene-AD08_RS08350;Dbxref=Genbank:WP_000880910.1;Name=WP_000880910.1;gbkey=CDS;gene=recN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026172.1;locus_tag=AD08_RS08350;product=DNA repair protein RecN;protein_id=WP_000880910.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 22982 23323 . + . ID=gene-AD08_RS08345;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=AD08_RS08345;old_locus_tag=AD08_2983 NZ_JHDJ01000165.1 Protein Homology CDS 22982 23323 . + 0 ID=cds-WP_001203437.1;Parent=gene-AD08_RS08345;Dbxref=Genbank:WP_001203437.1;Name=WP_001203437.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417107.2;locus_tag=AD08_RS08345;product=outer membrane protein assembly factor BamE;protein_id=WP_001203437.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 23385 23675 . - . ID=gene-AD08_RS08340;Name=AD08_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08340;old_locus_tag=AD08_2984 NZ_JHDJ01000165.1 Protein Homology CDS 23385 23675 . - 0 ID=cds-WP_001117838.1;Parent=gene-AD08_RS08340;Dbxref=Genbank:WP_001117838.1;Name=WP_001117838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417108.4;locus_tag=AD08_RS08340;product=RnfH family protein;protein_id=WP_001117838.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 23665 24141 . - . ID=gene-AD08_RS08335;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=AD08_RS08335;old_locus_tag=AD08_2985 NZ_JHDJ01000165.1 Protein Homology CDS 23665 24141 . - 0 ID=cds-WP_000600189.1;Parent=gene-AD08_RS08335;Dbxref=Genbank:WP_000600189.1;Name=WP_000600189.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417109.1;locus_tag=AD08_RS08335;product=type II toxin-antitoxin system toxin RatA;protein_id=WP_000600189.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 24273 24755 . + . ID=gene-AD08_RS08330;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AD08_RS08330;old_locus_tag=AD08_2986 NZ_JHDJ01000165.1 Protein Homology CDS 24273 24755 . + 0 ID=cds-WP_000162574.1;Parent=gene-AD08_RS08330;Dbxref=Genbank:WP_000162574.1;Name=WP_000162574.1;gbkey=CDS;gene=smpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311509.1;locus_tag=AD08_RS08330;product=SsrA-binding protein SmpB;protein_id=WP_000162574.1;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 24970 25332 . + . ID=gene-AD08_RS27520;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=AD08_RS27520 NZ_JHDJ01000165.1 cmsearch tmRNA 24970 25332 . + . ID=rna-AD08_RS27520;Parent=gene-AD08_RS27520;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27520;product=transfer-messenger RNA NZ_JHDJ01000165.1 cmsearch exon 24970 25332 . + . ID=exon-AD08_RS27520-1;Parent=rna-AD08_RS27520;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27520;product=transfer-messenger RNA NZ_JHDJ01000165.1 RefSeq pseudogene 25493 29419 . - . ID=gene-AD08_RS31280;Name=ypjA;end_range=29419,.;gbkey=Gene;gene=ypjA;gene_biotype=pseudogene;locus_tag=AD08_RS31280;old_locus_tag=AD08_2987;partial=true;pseudo=true NZ_JHDJ01000165.1 Protein Homology CDS 25493 29419 . - 0 ID=cds-AD08_RS31280;Parent=gene-AD08_RS31280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=29419,.;gbkey=CDS;gene=ypjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417134.2;locus_tag=AD08_RS31280;partial=true;product=adhesin-like autotransporter YpjA/EhaD;pseudo=true;transl_table=11 NZ_JHDJ01000165.1 RefSeq gene 29450 30316 . - . ID=gene-AD08_RS08325;Name=AD08_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08325;old_locus_tag=AD08_2988 NZ_JHDJ01000165.1 Protein Homology CDS 29450 30316 . - 0 ID=cds-WP_000878218.1-4;Parent=gene-AD08_RS08325;Dbxref=Genbank:WP_000878218.1;Name=WP_000878218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707076.1;locus_tag=AD08_RS08325;product=IS3 family transposase;protein_id=WP_000878218.1;transl_table=11 ##sequence-region NZ_JHDJ01000166.1 1 550 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000166.1 RefSeq region 1 550 . + . ID=NZ_JHDJ01000166.1:1..550;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000166.1 RefSeq gene 213 289 . - . ID=gene-AD08_RS08320;Name=AD08_RS08320;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS08320;old_locus_tag=AD08_2989 NZ_JHDJ01000166.1 tRNAscan-SE tRNA 213 289 . - . ID=rna-AD08_RS08320;Parent=gene-AD08_RS08320;anticodon=(pos:complement(253..255));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08320;product=tRNA-Arg NZ_JHDJ01000166.1 tRNAscan-SE exon 213 289 . - . ID=exon-AD08_RS08320-1;Parent=rna-AD08_RS08320;anticodon=(pos:complement(253..255));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08320;product=tRNA-Arg ##sequence-region NZ_JHDJ01000167.1 1 97570 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000167.1 RefSeq region 1 97570 . + . ID=NZ_JHDJ01000167.1:1..97570;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000167.1 RefSeq gene 1 154 . - . ID=gene-AD08_RS08315;Name=AD08_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08315;old_locus_tag=AD08_2991;partial=true;start_range=.,1 NZ_JHDJ01000167.1 Protein Homology CDS 1 154 . - 0 ID=cds-WP_032218092.1-3;Parent=gene-AD08_RS08315;Dbxref=Genbank:WP_032218092.1;Name=WP_032218092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD08_RS08315;partial=true;product=transposase;protein_id=WP_032218092.1;start_range=.,1;transl_table=11 NZ_JHDJ01000167.1 RefSeq pseudogene 220 876 . - . ID=gene-AD08_RS08310;Name=AD08_RS08310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS08310;old_locus_tag=AD08_2992;partial=true;pseudo=true;start_range=.,220 NZ_JHDJ01000167.1 Protein Homology CDS 220 876 . - 0 ID=cds-AD08_RS08310;Parent=gene-AD08_RS08310;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417134.2;locus_tag=AD08_RS08310;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,220;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 941 1060 . - . ID=gene-AD08_RS31740;Name=AD08_RS31740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31740;old_locus_tag=AD08_2993 NZ_JHDJ01000167.1 Protein Homology CDS 941 1060 . - 0 ID=cds-WP_001120794.1;Parent=gene-AD08_RS31740;Dbxref=Genbank:WP_001120794.1;Name=WP_001120794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131457.1;locus_tag=AD08_RS31740;product=hypothetical protein;protein_id=WP_001120794.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 1215 1433 . - . ID=gene-AD08_RS29295;Name=AD08_RS29295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS29295;old_locus_tag=AD08_2994 NZ_JHDJ01000167.1 Protein Homology CDS 1215 1433 . - 0 ID=cds-WP_071524906.1;Parent=gene-AD08_RS29295;Dbxref=Genbank:WP_071524906.1;Name=WP_071524906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000340076.1;locus_tag=AD08_RS29295;product=recombinase family protein;protein_id=WP_071524906.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq pseudogene 1788 3161 . - . ID=gene-AD08_RS31745;Name=AD08_RS31745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31745;pseudo=true NZ_JHDJ01000167.1 Protein Homology CDS 1788 3161 . - 0 ID=cds-AD08_RS31745;Parent=gene-AD08_RS31745;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961353.1;locus_tag=AD08_RS31745;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 3912 3987 . - . ID=gene-AD08_RS08295;Name=AD08_RS08295;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS08295;old_locus_tag=AD08_2997 NZ_JHDJ01000167.1 tRNAscan-SE tRNA 3912 3987 . - . ID=rna-AD08_RS08295;Parent=gene-AD08_RS08295;anticodon=(pos:complement(3952..3954));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08295;product=tRNA-Ile NZ_JHDJ01000167.1 tRNAscan-SE exon 3912 3987 . - . ID=exon-AD08_RS08295-1;Parent=rna-AD08_RS08295;anticodon=(pos:complement(3952..3954));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08295;product=tRNA-Ile NZ_JHDJ01000167.1 RefSeq gene 4547 5584 . + . ID=gene-AD08_RS30665;Name=AD08_RS30665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30665;old_locus_tag=AD08_2998 NZ_JHDJ01000167.1 Protein Homology CDS 4547 5584 . + 0 ID=cds-WP_032227339.1;Parent=gene-AD08_RS30665;Dbxref=Genbank:WP_032227339.1;Name=WP_032227339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005760882.1;locus_tag=AD08_RS30665;product=alpha-amylase;protein_id=WP_032227339.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq pseudogene 5792 6799 . + . ID=gene-AD08_RS30670;Name=AD08_RS30670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30670;pseudo=true NZ_JHDJ01000167.1 Protein Homology CDS 5792 6799 . + 0 ID=cds-AD08_RS30670;Parent=gene-AD08_RS30670;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311546.1;locus_tag=AD08_RS30670;product=alpha amylase;pseudo=true;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 7135 8112 . + . ID=gene-AD08_RS08290;Name=csiD;gbkey=Gene;gene=csiD;gene_biotype=protein_coding;locus_tag=AD08_RS08290;old_locus_tag=AD08_3000 NZ_JHDJ01000167.1 Protein Homology CDS 7135 8112 . + 0 ID=cds-WP_000993126.1;Parent=gene-AD08_RS08290;Dbxref=Genbank:WP_000993126.1;Name=WP_000993126.1;gbkey=CDS;gene=csiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=AD08_RS08290;product=carbon starvation induced protein CsiD;protein_id=WP_000993126.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 8132 9400 . + . ID=gene-AD08_RS08285;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=AD08_RS08285;old_locus_tag=AD08_3001 NZ_JHDJ01000167.1 Protein Homology CDS 8132 9400 . + 0 ID=cds-WP_000271951.1;Parent=gene-AD08_RS08285;Dbxref=Genbank:WP_000271951.1;Name=WP_000271951.1;gbkey=CDS;gene=lhgO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417146.2;locus_tag=AD08_RS08285;product=L-2-hydroxyglutarate oxidase;protein_id=WP_000271951.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 9423 10871 . + . ID=gene-AD08_RS08280;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=AD08_RS08280;old_locus_tag=AD08_3002 NZ_JHDJ01000167.1 Protein Homology CDS 9423 10871 . + 0 ID=cds-WP_000772831.1;Parent=gene-AD08_RS08280;Dbxref=Genbank:WP_000772831.1;Name=WP_000772831.1;gbkey=CDS;gene=gabD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417147.1;locus_tag=AD08_RS08280;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_000772831.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 10885 12165 . + . ID=gene-AD08_RS08275;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=AD08_RS08275;old_locus_tag=AD08_3003 NZ_JHDJ01000167.1 Protein Homology CDS 10885 12165 . + 0 ID=cds-WP_032219155.1;Parent=gene-AD08_RS08275;Dbxref=Genbank:WP_032219155.1;Name=WP_032219155.1;gbkey=CDS;gene=gabT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417148.1;locus_tag=AD08_RS08275;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_032219155.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 12403 13803 . + . ID=gene-AD08_RS08270;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=AD08_RS08270;old_locus_tag=AD08_3004 NZ_JHDJ01000167.1 Protein Homology CDS 12403 13803 . + 0 ID=cds-WP_032219156.1;Parent=gene-AD08_RS08270;Dbxref=Genbank:WP_032219156.1;Name=WP_032219156.1;gbkey=CDS;gene=gabP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417149.1;locus_tag=AD08_RS08270;product=GABA permease;protein_id=WP_032219156.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 13824 14486 . + . ID=gene-AD08_RS08265;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=AD08_RS08265;old_locus_tag=AD08_3005 NZ_JHDJ01000167.1 Protein Homology CDS 13824 14486 . + 0 ID=cds-WP_000156811.1;Parent=gene-AD08_RS08265;Dbxref=Genbank:WP_000156811.1;Name=WP_000156811.1;gbkey=CDS;gene=csiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311552.2;locus_tag=AD08_RS08265;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000156811.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 14487 14936 . - . ID=gene-AD08_RS08260;Name=kbp;gbkey=Gene;gene=kbp;gene_biotype=protein_coding;locus_tag=AD08_RS08260;old_locus_tag=AD08_3006 NZ_JHDJ01000167.1 Protein Homology CDS 14487 14936 . - 0 ID=cds-WP_000522415.1;Parent=gene-AD08_RS08260;Dbxref=Genbank:WP_000522415.1;Name=WP_000522415.1;gbkey=CDS;gene=kbp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417151.1;locus_tag=AD08_RS08260;product=potassium binding protein Kbp;protein_id=WP_000522415.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 15020 15178 . - . ID=gene-AD08_RS08255;Name=AD08_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08255;old_locus_tag=AD08_3007 NZ_JHDJ01000167.1 Protein Homology CDS 15020 15178 . - 0 ID=cds-WP_000508177.1;Parent=gene-AD08_RS08255;Dbxref=Genbank:WP_000508177.1;Name=WP_000508177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311554.1;locus_tag=AD08_RS08255;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508177.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 15361 15660 . + . ID=gene-AD08_RS08250;Name=AD08_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08250;old_locus_tag=AD08_3008 NZ_JHDJ01000167.1 Protein Homology CDS 15361 15660 . + 0 ID=cds-WP_000137280.1;Parent=gene-AD08_RS08250;Dbxref=Genbank:WP_000137280.1;Name=WP_000137280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417153.1;locus_tag=AD08_RS08250;product=helix-turn-helix transcriptional regulator;protein_id=WP_000137280.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 15670 16194 . + . ID=gene-AD08_RS08245;Name=ygaP;gbkey=Gene;gene=ygaP;gene_biotype=protein_coding;locus_tag=AD08_RS08245;old_locus_tag=AD08_3009 NZ_JHDJ01000167.1 Protein Homology CDS 15670 16194 . + 0 ID=cds-WP_001229442.1;Parent=gene-AD08_RS08245;Dbxref=Genbank:WP_001229442.1;Name=WP_001229442.1;gbkey=CDS;gene=ygaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417154.1;locus_tag=AD08_RS08245;product=thiosulfate sulfurtransferase YgaP;protein_id=WP_001229442.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 16241 16645 . - . ID=gene-AD08_RS08240;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=AD08_RS08240;old_locus_tag=AD08_3010 NZ_JHDJ01000167.1 Protein Homology CDS 16241 16645 . - 0 ID=cds-WP_000115383.1;Parent=gene-AD08_RS08240;Dbxref=Genbank:WP_000115383.1;Name=WP_000115383.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311557.1;locus_tag=AD08_RS08240;product=DNA-binding protein StpA;protein_id=WP_000115383.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 17314 17763 . + . ID=gene-AD08_RS08235;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=AD08_RS08235;old_locus_tag=AD08_3011 NZ_JHDJ01000167.1 Protein Homology CDS 17314 17763 . + 0 ID=cds-WP_000492656.1;Parent=gene-AD08_RS08235;Dbxref=Genbank:WP_000492656.1;Name=WP_000492656.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311558.1;locus_tag=AD08_RS08235;product=L-alanine exporter AlaE;protein_id=WP_000492656.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 17800 18144 . - . ID=gene-AD08_RS08230;Name=AD08_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08230;old_locus_tag=AD08_3012 NZ_JHDJ01000167.1 Protein Homology CDS 17800 18144 . - 0 ID=cds-WP_000281320.1;Parent=gene-AD08_RS08230;Dbxref=Genbank:WP_000281320.1;Name=WP_000281320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311559.1;locus_tag=AD08_RS08230;product=YgaC family protein;protein_id=WP_000281320.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 18296 18625 . + . ID=gene-AD08_RS08225;Name=AD08_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08225;old_locus_tag=AD08_3013 NZ_JHDJ01000167.1 Protein Homology CDS 18296 18625 . + 0 ID=cds-WP_001295174.1;Parent=gene-AD08_RS08225;Dbxref=Genbank:WP_001295174.1;Name=WP_001295174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311560.2;locus_tag=AD08_RS08225;product=DUF883 domain-containing protein;protein_id=WP_001295174.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 18873 19118 . + . ID=gene-AD08_RS08220;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=AD08_RS08220;old_locus_tag=AD08_3014 NZ_JHDJ01000167.1 Protein Homology CDS 18873 19118 . + 0 ID=cds-WP_001223227.1;Parent=gene-AD08_RS08220;Dbxref=Genbank:WP_001223227.1;Name=WP_001223227.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311563.1;locus_tag=AD08_RS08220;product=glutaredoxin-like protein NrdH;protein_id=WP_001223227.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 19115 19525 . + . ID=gene-AD08_RS08215;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=AD08_RS08215;old_locus_tag=AD08_3015 NZ_JHDJ01000167.1 Protein Homology CDS 19115 19525 . + 0 ID=cds-WP_000080947.1;Parent=gene-AD08_RS08215;Dbxref=Genbank:WP_000080947.1;Name=WP_000080947.1;gbkey=CDS;gene=nrdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311564.1;locus_tag=AD08_RS08215;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_000080947.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 19498 21642 . + . ID=gene-AD08_RS08210;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=AD08_RS08210;old_locus_tag=AD08_3016 NZ_JHDJ01000167.1 Protein Homology CDS 19498 21642 . + 0 ID=cds-WP_000246527.1;Parent=gene-AD08_RS08210;Dbxref=Genbank:WP_000246527.1;Name=WP_000246527.1;gbkey=CDS;gene=nrdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417161.1;locus_tag=AD08_RS08210;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_000246527.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 21652 22611 . + . ID=gene-AD08_RS08205;Name=AD08_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08205;old_locus_tag=AD08_3017 NZ_JHDJ01000167.1 Protein Homology CDS 21652 22611 . + 0 ID=cds-WP_000777969.1;Parent=gene-AD08_RS08205;Dbxref=Genbank:WP_000777969.1;Name=WP_000777969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417162.1;locus_tag=AD08_RS08205;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777969.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 22965 24167 . + . ID=gene-AD08_RS08200;Name=AD08_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08200;old_locus_tag=AD08_3018 NZ_JHDJ01000167.1 Protein Homology CDS 22965 24167 . + 0 ID=cds-WP_000985494.1;Parent=gene-AD08_RS08200;Dbxref=Genbank:WP_000985494.1;Name=WP_000985494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417163.1;locus_tag=AD08_RS08200;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985494.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 24160 25224 . + . ID=gene-AD08_RS08195;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=AD08_RS08195;old_locus_tag=AD08_3019 NZ_JHDJ01000167.1 Protein Homology CDS 24160 25224 . + 0 ID=cds-WP_000774988.1;Parent=gene-AD08_RS08195;Dbxref=Genbank:WP_000774988.1;Name=WP_000774988.1;gbkey=CDS;gene=proW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417164.1;locus_tag=AD08_RS08195;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000774988.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 25282 26274 . + . ID=gene-AD08_RS08190;Name=AD08_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08190;old_locus_tag=AD08_3020 NZ_JHDJ01000167.1 Protein Homology CDS 25282 26274 . + 0 ID=cds-WP_001216525.1;Parent=gene-AD08_RS08190;Dbxref=Genbank:WP_001216525.1;Name=WP_001216525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311569.1;locus_tag=AD08_RS08190;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216525.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 26466 27650 . + . ID=gene-AD08_RS08185;Name=AD08_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08185;old_locus_tag=AD08_3022 NZ_JHDJ01000167.1 Protein Homology CDS 26466 27650 . + 0 ID=cds-WP_000165680.1;Parent=gene-AD08_RS08185;Dbxref=Genbank:WP_000165680.1;Name=WP_000165680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311570.1;locus_tag=AD08_RS08185;product=MFS transporter;protein_id=WP_000165680.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 27774 28511 . + . ID=gene-AD08_RS08180;Name=AD08_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08180;old_locus_tag=AD08_3023 NZ_JHDJ01000167.1 Protein Homology CDS 27774 28511 . + 0 ID=cds-WP_000445651.1;Parent=gene-AD08_RS08180;Dbxref=Genbank:WP_000445651.1;Name=WP_000445651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417167.1;locus_tag=AD08_RS08180;product=L-valine exporter subunit YgaZ;protein_id=WP_000445651.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 28501 28836 . + . ID=gene-AD08_RS08175;Name=ygaH;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;locus_tag=AD08_RS08175;old_locus_tag=AD08_3024 NZ_JHDJ01000167.1 Protein Homology CDS 28501 28836 . + 0 ID=cds-WP_000119763.1;Parent=gene-AD08_RS08175;Dbxref=Genbank:WP_000119763.1;Name=WP_000119763.1;gbkey=CDS;gene=ygaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417168.1;locus_tag=AD08_RS08175;product=L-valine transporter subunit YgaH;protein_id=WP_000119763.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 28855 28956 . - . ID=gene-AD08_RS31750;Name=AD08_RS31750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31750 NZ_JHDJ01000167.1 Protein Homology CDS 28855 28956 . - 0 ID=cds-WP_048265082.1;Parent=gene-AD08_RS31750;Dbxref=Genbank:WP_048265082.1;Name=WP_048265082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228386.1;locus_tag=AD08_RS31750;product=hypothetical protein;protein_id=WP_048265082.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 28927 29457 . + . ID=gene-AD08_RS08170;Name=emrR;gbkey=Gene;gene=emrR;gene_biotype=protein_coding;locus_tag=AD08_RS08170;old_locus_tag=AD08_3025 NZ_JHDJ01000167.1 Protein Homology CDS 28927 29457 . + 0 ID=cds-WP_000378442.1;Parent=gene-AD08_RS08170;Dbxref=Genbank:WP_000378442.1;Name=WP_000378442.1;gbkey=CDS;gene=emrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311573.1;locus_tag=AD08_RS08170;product=multidrug efflux transporter EmrAB transcriptional repressor EmrR;protein_id=WP_000378442.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 29584 30756 . + . ID=gene-AD08_RS08165;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=AD08_RS08165;old_locus_tag=AD08_3027 NZ_JHDJ01000167.1 Protein Homology CDS 29584 30756 . + 0 ID=cds-WP_001326681.1;Parent=gene-AD08_RS08165;Dbxref=Genbank:WP_001326681.1;Name=WP_001326681.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417170.1;locus_tag=AD08_RS08165;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001326681.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 30773 32311 . + . ID=gene-AD08_RS08160;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=AD08_RS08160;old_locus_tag=AD08_3028 NZ_JHDJ01000167.1 Protein Homology CDS 30773 32311 . + 0 ID=cds-WP_001295176.1;Parent=gene-AD08_RS08160;Dbxref=Genbank:WP_001295176.1;Name=WP_001295176.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311575.1;locus_tag=AD08_RS08160;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001295176.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 32375 32890 . - . ID=gene-AD08_RS08155;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=AD08_RS08155;old_locus_tag=AD08_3029 NZ_JHDJ01000167.1 Protein Homology CDS 32375 32890 . - 0 ID=cds-WP_001130211.1;Parent=gene-AD08_RS08155;Dbxref=Genbank:WP_001130211.1;Name=WP_001130211.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=AD08_RS08155;product=S-ribosylhomocysteine lyase;protein_id=WP_001130211.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 33040 34596 . - . ID=gene-AD08_RS08150;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=AD08_RS08150;old_locus_tag=AD08_3030 NZ_JHDJ01000167.1 Protein Homology CDS 33040 34596 . - 0 ID=cds-WP_000611804.1;Parent=gene-AD08_RS08150;Dbxref=Genbank:WP_000611804.1;Name=WP_000611804.1;gbkey=CDS;gene=gshA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417173.1;locus_tag=AD08_RS08150;product=glutamate--cysteine ligase;protein_id=WP_000611804.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 34669 35097 . - . ID=gene-AD08_RS08145;Name=AD08_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08145;old_locus_tag=AD08_3031 NZ_JHDJ01000167.1 Protein Homology CDS 34669 35097 . - 0 ID=cds-WP_001287454.1-2;Parent=gene-AD08_RS08145;Dbxref=Genbank:WP_001287454.1;Name=WP_001287454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417174.1;locus_tag=AD08_RS08145;product=DedA family protein;protein_id=WP_001287454.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 35094 35660 . - . ID=gene-AD08_RS08140;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=AD08_RS08140;old_locus_tag=AD08_3032 NZ_JHDJ01000167.1 Protein Homology CDS 35094 35660 . - 0 ID=cds-WP_000273290.1-2;Parent=gene-AD08_RS08140;Dbxref=Genbank:WP_000273290.1;Name=WP_000273290.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417175.1;locus_tag=AD08_RS08140;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000273290.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 35941 36017 . - . ID=gene-AD08_RS08135;Name=AD08_RS08135;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS08135;old_locus_tag=AD08_3033 NZ_JHDJ01000167.1 tRNAscan-SE tRNA 35941 36017 . - . ID=rna-AD08_RS08135;Parent=gene-AD08_RS08135;anticodon=(pos:complement(35981..35983));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08135;product=tRNA-Arg NZ_JHDJ01000167.1 tRNAscan-SE exon 35941 36017 . - . ID=exon-AD08_RS08135-1;Parent=rna-AD08_RS08135;anticodon=(pos:complement(35981..35983));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08135;product=tRNA-Arg NZ_JHDJ01000167.1 RefSeq gene 36216 36292 . - . ID=gene-AD08_RS08130;Name=AD08_RS08130;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS08130;old_locus_tag=AD08_3034 NZ_JHDJ01000167.1 tRNAscan-SE tRNA 36216 36292 . - . ID=rna-AD08_RS08130;Parent=gene-AD08_RS08130;anticodon=(pos:complement(36256..36258));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08130;product=tRNA-Arg NZ_JHDJ01000167.1 tRNAscan-SE exon 36216 36292 . - . ID=exon-AD08_RS08130-1;Parent=rna-AD08_RS08130;anticodon=(pos:complement(36256..36258));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08130;product=tRNA-Arg NZ_JHDJ01000167.1 RefSeq gene 36356 36432 . - . ID=gene-AD08_RS08125;Name=AD08_RS08125;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS08125;old_locus_tag=AD08_3035 NZ_JHDJ01000167.1 tRNAscan-SE tRNA 36356 36432 . - . ID=rna-AD08_RS08125;Parent=gene-AD08_RS08125;anticodon=(pos:complement(36396..36398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08125;product=tRNA-Arg NZ_JHDJ01000167.1 tRNAscan-SE exon 36356 36432 . - . ID=exon-AD08_RS08125-1;Parent=rna-AD08_RS08125;anticodon=(pos:complement(36396..36398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08125;product=tRNA-Arg NZ_JHDJ01000167.1 RefSeq gene 36496 36572 . - . ID=gene-AD08_RS08120;Name=AD08_RS08120;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS08120;old_locus_tag=AD08_3036 NZ_JHDJ01000167.1 tRNAscan-SE tRNA 36496 36572 . - . ID=rna-AD08_RS08120;Parent=gene-AD08_RS08120;anticodon=(pos:complement(36536..36538));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08120;product=tRNA-Arg NZ_JHDJ01000167.1 tRNAscan-SE exon 36496 36572 . - . ID=exon-AD08_RS08120-1;Parent=rna-AD08_RS08120;anticodon=(pos:complement(36536..36538));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08120;product=tRNA-Arg NZ_JHDJ01000167.1 RefSeq gene 36771 36847 . - . ID=gene-AD08_RS08115;Name=AD08_RS08115;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS08115;old_locus_tag=AD08_3037 NZ_JHDJ01000167.1 tRNAscan-SE tRNA 36771 36847 . - . ID=rna-AD08_RS08115;Parent=gene-AD08_RS08115;anticodon=(pos:complement(36811..36813));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08115;product=tRNA-Arg NZ_JHDJ01000167.1 tRNAscan-SE exon 36771 36847 . - . ID=exon-AD08_RS08115-1;Parent=rna-AD08_RS08115;anticodon=(pos:complement(36811..36813));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08115;product=tRNA-Arg NZ_JHDJ01000167.1 RefSeq gene 36851 36943 . - . ID=gene-AD08_RS08110;Name=AD08_RS08110;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS08110;old_locus_tag=AD08_3038 NZ_JHDJ01000167.1 tRNAscan-SE tRNA 36851 36943 . - . ID=rna-AD08_RS08110;Parent=gene-AD08_RS08110;anticodon=(pos:complement(36907..36909));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08110;product=tRNA-Ser NZ_JHDJ01000167.1 tRNAscan-SE exon 36851 36943 . - . ID=exon-AD08_RS08110-1;Parent=rna-AD08_RS08110;anticodon=(pos:complement(36907..36909));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS08110;product=tRNA-Ser NZ_JHDJ01000167.1 RefSeq gene 37259 37444 . - . ID=gene-AD08_RS08105;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=AD08_RS08105;old_locus_tag=AD08_3039 NZ_JHDJ01000167.1 Protein Homology CDS 37259 37444 . - 0 ID=cds-WP_000906486.1;Parent=gene-AD08_RS08105;Dbxref=Genbank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=AD08_RS08105;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 37679 40309 . - . ID=gene-AD08_RS08100;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=AD08_RS08100;old_locus_tag=AD08_3041 NZ_JHDJ01000167.1 Protein Homology CDS 37679 40309 . - 0 ID=cds-WP_000047184.1;Parent=gene-AD08_RS08100;Dbxref=Genbank:WP_000047184.1;Name=WP_000047184.1;gbkey=CDS;gene=alaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417177.1;locus_tag=AD08_RS08100;product=alanine--tRNA ligase;protein_id=WP_000047184.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 40437 40937 . - . ID=gene-AD08_RS08090;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=AD08_RS08090;old_locus_tag=AD08_3043 NZ_JHDJ01000167.1 Protein Homology CDS 40437 40937 . - 0 ID=cds-WP_000140508.1;Parent=gene-AD08_RS08090;Dbxref=Genbank:WP_000140508.1;Name=WP_000140508.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417178.1;locus_tag=AD08_RS08090;product=recombination regulator RecX;protein_id=WP_000140508.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 41006 42067 . - . ID=gene-AD08_RS08085;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=AD08_RS08085;old_locus_tag=AD08_3044 NZ_JHDJ01000167.1 Protein Homology CDS 41006 42067 . - 0 ID=cds-WP_000963143.1;Parent=gene-AD08_RS08085;Dbxref=Genbank:WP_000963143.1;Name=WP_000963143.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311583.1;locus_tag=AD08_RS08085;product=recombinase RecA;protein_id=WP_000963143.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 42147 42644 . - . ID=gene-AD08_RS08080;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=AD08_RS08080;old_locus_tag=AD08_3045 NZ_JHDJ01000167.1 Protein Homology CDS 42147 42644 . - 0 ID=cds-WP_000132231.1;Parent=gene-AD08_RS08080;Dbxref=Genbank:WP_000132231.1;Name=WP_000132231.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417180.1;locus_tag=AD08_RS08080;product=nicotinamide-nucleotide amidase;protein_id=WP_000132231.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 42789 43874 . - . ID=gene-AD08_RS08075;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=AD08_RS08075;old_locus_tag=AD08_3046 NZ_JHDJ01000167.1 Protein Homology CDS 42789 43874 . - 0 ID=cds-WP_001295177.1;Parent=gene-AD08_RS08075;Dbxref=Genbank:WP_001295177.1;Name=WP_001295177.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417181.1;locus_tag=AD08_RS08075;product=lytic murein transglycosylase B;protein_id=WP_001295177.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 44130 44693 . + . ID=gene-AD08_RS08070;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;gene_synonym=gutA;locus_tag=AD08_RS08070;old_locus_tag=AD08_3047 NZ_JHDJ01000167.1 Protein Homology CDS 44130 44693 . + 0 ID=cds-WP_000573326.1;Parent=gene-AD08_RS08070;Dbxref=Genbank:WP_000573326.1;Name=WP_000573326.1;gbkey=CDS;gene=srlA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026180.1;locus_tag=AD08_RS08070;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573326.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq pseudogene 44690 45648 . + . ID=gene-AD08_RS0126500;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=pseudogene;gene_synonym=gutE;locus_tag=AD08_RS0126500;pseudo=true NZ_JHDJ01000167.1 Protein Homology CDS 44690 45648 . + 0 ID=cds-AD08_RS0126500;Parent=gene-AD08_RS0126500;Note=frameshifted;gbkey=CDS;gene=srlE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026181.1;locus_tag=AD08_RS0126500;product=PTS glucitol/sorbitol transporter subunit IIB;pseudo=true;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 45659 46030 . + . ID=gene-AD08_RS08065;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=AD08_RS08065;old_locus_tag=AD08_3049 NZ_JHDJ01000167.1 Protein Homology CDS 45659 46030 . + 0 ID=cds-WP_000216194.1;Parent=gene-AD08_RS08065;Dbxref=Genbank:WP_000216194.1;Name=WP_000216194.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417184.1;locus_tag=AD08_RS08065;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000216194.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 46034 46813 . + . ID=gene-AD08_RS08060;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=AD08_RS08060;old_locus_tag=AD08_3050 NZ_JHDJ01000167.1 Protein Homology CDS 46034 46813 . + 0 ID=cds-WP_032219163.1;Parent=gene-AD08_RS08060;Dbxref=Genbank:WP_032219163.1;Name=WP_032219163.1;gbkey=CDS;gene=srlD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417185.1;locus_tag=AD08_RS08060;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_032219163.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 46918 47277 . + . ID=gene-AD08_RS08055;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=AD08_RS08055;old_locus_tag=AD08_3051 NZ_JHDJ01000167.1 Protein Homology CDS 46918 47277 . + 0 ID=cds-WP_000252908.1;Parent=gene-AD08_RS08055;Dbxref=Genbank:WP_000252908.1;Name=WP_000252908.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417186.1;locus_tag=AD08_RS08055;product=transcriptional regulator GutM;protein_id=WP_000252908.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 47344 48117 . + . ID=gene-AD08_RS08050;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=AD08_RS08050;old_locus_tag=AD08_3052 NZ_JHDJ01000167.1 Protein Homology CDS 47344 48117 . + 0 ID=cds-WP_000804550.1;Parent=gene-AD08_RS08050;Dbxref=Genbank:WP_000804550.1;Name=WP_000804550.1;gbkey=CDS;gene=srlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417187.1;locus_tag=AD08_RS08050;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804550.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 48110 49075 . + . ID=gene-AD08_RS08045;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=AD08_RS08045;old_locus_tag=AD08_3053 NZ_JHDJ01000167.1 Protein Homology CDS 48110 49075 . + 0 ID=cds-WP_001287420.1;Parent=gene-AD08_RS08045;Dbxref=Genbank:WP_001287420.1;Name=WP_001287420.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=AD08_RS08045;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001287420.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 49072 50586 . - . ID=gene-AD08_RS08040;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=AD08_RS08040;old_locus_tag=AD08_3054 NZ_JHDJ01000167.1 Protein Homology CDS 49072 50586 . - 0 ID=cds-WP_000010749.1;Parent=gene-AD08_RS08040;Dbxref=Genbank:WP_000010749.1;Name=WP_000010749.1;gbkey=CDS;gene=norR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417189.2;locus_tag=AD08_RS08040;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010749.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 50773 52212 . + . ID=gene-AD08_RS08035;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=AD08_RS08035;old_locus_tag=AD08_3055 NZ_JHDJ01000167.1 Protein Homology CDS 50773 52212 . + 0 ID=cds-WP_000029617.1;Parent=gene-AD08_RS08035;Dbxref=Genbank:WP_000029617.1;Name=WP_000029617.1;gbkey=CDS;gene=norV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708517.1;locus_tag=AD08_RS08035;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000029617.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 52209 53342 . + . ID=gene-AD08_RS08030;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=AD08_RS08030;old_locus_tag=AD08_3056 NZ_JHDJ01000167.1 Protein Homology CDS 52209 53342 . + 0 ID=cds-WP_000064732.1;Parent=gene-AD08_RS08030;Dbxref=Genbank:WP_000064732.1;Name=WP_000064732.1;gbkey=CDS;gene=norW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417191.1;locus_tag=AD08_RS08030;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_000064732.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 53470 55722 . - . ID=gene-AD08_RS08025;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=AD08_RS08025;old_locus_tag=AD08_3057 NZ_JHDJ01000167.1 Protein Homology CDS 53470 55722 . - 0 ID=cds-WP_001107704.1;Parent=gene-AD08_RS08025;Dbxref=Genbank:WP_001107704.1;Name=WP_001107704.1;gbkey=CDS;gene=hypF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417192.1;locus_tag=AD08_RS08025;product=carbamoyltransferase HypF;protein_id=WP_001107704.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 55875 56402 . - . ID=gene-AD08_RS08020;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=AD08_RS08020;old_locus_tag=AD08_3058 NZ_JHDJ01000167.1 Protein Homology CDS 55875 56402 . - 0 ID=cds-WP_001078777.1;Parent=gene-AD08_RS08020;Dbxref=Genbank:WP_001078777.1;Name=WP_001078777.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311596.1;locus_tag=AD08_RS08020;product=electron transport protein HydN;protein_id=WP_001078777.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 56551 57564 . - . ID=gene-AD08_RS08015;Name=AD08_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08015;old_locus_tag=AD08_3060 NZ_JHDJ01000167.1 Protein Homology CDS 56551 57564 . - 0 ID=cds-WP_001300815.1;Parent=gene-AD08_RS08015;Dbxref=Genbank:WP_001300815.1;Name=WP_001300815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311597.3;locus_tag=AD08_RS08015;product=DNA-binding transcriptional regulator AscG;protein_id=WP_001300815.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 57821 59278 . + . ID=gene-AD08_RS08010;Name=ascF;gbkey=Gene;gene=ascF;gene_biotype=protein_coding;locus_tag=AD08_RS08010;old_locus_tag=AD08_3061 NZ_JHDJ01000167.1 Protein Homology CDS 57821 59278 . + 0 ID=cds-WP_032219165.1;Parent=gene-AD08_RS08010;Dbxref=Genbank:WP_032219165.1;Name=WP_032219165.1;gbkey=CDS;gene=ascF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026182.1;locus_tag=AD08_RS08010;product=PTS cellobiose/arbutin/salicin transporter subunit IIBC;protein_id=WP_032219165.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 59287 60711 . + . ID=gene-AD08_RS08005;Name=AD08_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS08005;old_locus_tag=AD08_3062 NZ_JHDJ01000167.1 Protein Homology CDS 59287 60711 . + 0 ID=cds-WP_000110363.1;Parent=gene-AD08_RS08005;Dbxref=Genbank:WP_000110363.1;Name=WP_000110363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417196.1;locus_tag=AD08_RS08005;product=6-phospho-beta-glucosidase AscB;protein_id=WP_000110363.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 60870 61340 . - . ID=gene-AD08_RS08000;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=AD08_RS08000;old_locus_tag=AD08_3063 NZ_JHDJ01000167.1 Protein Homology CDS 60870 61340 . - 0 ID=cds-WP_000132961.1;Parent=gene-AD08_RS08000;Dbxref=Genbank:WP_000132961.1;Name=WP_000132961.1;gbkey=CDS;gene=hycI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311600.1;locus_tag=AD08_RS08000;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132961.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 61333 61743 . - . ID=gene-AD08_RS07995;Name=AD08_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07995;old_locus_tag=AD08_3064 NZ_JHDJ01000167.1 Protein Homology CDS 61333 61743 . - 0 ID=cds-WP_001291921.1;Parent=gene-AD08_RS07995;Dbxref=Genbank:WP_001291921.1;Name=WP_001291921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311601.1;locus_tag=AD08_RS07995;product=formate hydrogenlyase assembly protein HycH;protein_id=WP_001291921.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 61740 62507 . - . ID=gene-AD08_RS07990;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=AD08_RS07990;old_locus_tag=AD08_3065 NZ_JHDJ01000167.1 Protein Homology CDS 61740 62507 . - 0 ID=cds-WP_000067392.1;Parent=gene-AD08_RS07990;Dbxref=Genbank:WP_000067392.1;Name=WP_000067392.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417199.1;locus_tag=AD08_RS07990;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067392.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 62507 63049 . - . ID=gene-AD08_RS07985;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=AD08_RS07985;old_locus_tag=AD08_3066 NZ_JHDJ01000167.1 Protein Homology CDS 62507 63049 . - 0 ID=cds-WP_000493781.1;Parent=gene-AD08_RS07985;Dbxref=Genbank:WP_000493781.1;Name=WP_000493781.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417200.1;locus_tag=AD08_RS07985;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493781.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 63059 64768 . - . ID=gene-AD08_RS07980;Name=AD08_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07980;old_locus_tag=AD08_3067 NZ_JHDJ01000167.1 Protein Homology CDS 63059 64768 . - 0 ID=cds-WP_001288122.1;Parent=gene-AD08_RS07980;Dbxref=Genbank:WP_001288122.1;Name=WP_001288122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=AD08_RS07980;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288122.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 64786 65709 . - . ID=gene-AD08_RS07975;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=AD08_RS07975;old_locus_tag=AD08_3068 NZ_JHDJ01000167.1 Protein Homology CDS 64786 65709 . - 0 ID=cds-WP_000115224.1;Parent=gene-AD08_RS07975;Dbxref=Genbank:WP_000115224.1;Name=WP_000115224.1;gbkey=CDS;gene=hycD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417202.1;locus_tag=AD08_RS07975;product=formate hydrogenlyase subunit HycD;protein_id=WP_000115224.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 65712 67538 . - . ID=gene-AD08_RS07970;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=AD08_RS07970;old_locus_tag=AD08_3069 NZ_JHDJ01000167.1 Protein Homology CDS 65712 67538 . - 0 ID=cds-WP_001274396.1;Parent=gene-AD08_RS07970;Dbxref=Genbank:WP_001274396.1;Name=WP_001274396.1;gbkey=CDS;gene=hycC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417203.1;locus_tag=AD08_RS07970;product=formate hydrogenlyase subunit 3;protein_id=WP_001274396.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 67535 68146 . - . ID=gene-AD08_RS07965;Name=AD08_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07965;old_locus_tag=AD08_3070 NZ_JHDJ01000167.1 Protein Homology CDS 67535 68146 . - 0 ID=cds-WP_001079186.1;Parent=gene-AD08_RS07965;Dbxref=Genbank:WP_001079186.1;Name=WP_001079186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417204.1;locus_tag=AD08_RS07965;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079186.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 68271 68732 . - . ID=gene-AD08_RS07960;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=AD08_RS07960;old_locus_tag=AD08_3071 NZ_JHDJ01000167.1 Protein Homology CDS 68271 68732 . - 0 ID=cds-WP_000158056.1;Parent=gene-AD08_RS07960;Dbxref=Genbank:WP_000158056.1;Name=WP_000158056.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311608.1;locus_tag=AD08_RS07960;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158056.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 68944 69294 . + . ID=gene-AD08_RS07955;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AD08_RS07955;old_locus_tag=AD08_3072 NZ_JHDJ01000167.1 Protein Homology CDS 68944 69294 . + 0 ID=cds-WP_001299100.1;Parent=gene-AD08_RS07955;Dbxref=Genbank:WP_001299100.1;Name=WP_001299100.1;gbkey=CDS;gene=hypA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311609.1;locus_tag=AD08_RS07955;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_001299100.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 69298 70170 . + . ID=gene-AD08_RS07950;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=AD08_RS07950;old_locus_tag=AD08_3073 NZ_JHDJ01000167.1 Protein Homology CDS 69298 70170 . + 0 ID=cds-WP_000337665.1;Parent=gene-AD08_RS07950;Dbxref=Genbank:WP_000337665.1;Name=WP_000337665.1;gbkey=CDS;gene=hypB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417207.1;locus_tag=AD08_RS07950;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337665.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 70161 70433 . + . ID=gene-AD08_RS07945;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=AD08_RS07945;old_locus_tag=AD08_3074 NZ_JHDJ01000167.1 Protein Homology CDS 70161 70433 . + 0 ID=cds-WP_000334881.1;Parent=gene-AD08_RS07945;Dbxref=Genbank:WP_000334881.1;Name=WP_000334881.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311611.1;locus_tag=AD08_RS07945;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334881.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 70433 71554 . + . ID=gene-AD08_RS07940;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=AD08_RS07940;old_locus_tag=AD08_3075 NZ_JHDJ01000167.1 Protein Homology CDS 70433 71554 . + 0 ID=cds-WP_001212985.1;Parent=gene-AD08_RS07940;Dbxref=Genbank:WP_001212985.1;Name=WP_001212985.1;gbkey=CDS;gene=hypD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417209.1;locus_tag=AD08_RS07940;product=hydrogenase formation protein HypD;protein_id=WP_001212985.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 71551 72561 . + . ID=gene-AD08_RS07935;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=AD08_RS07935;old_locus_tag=AD08_3076 NZ_JHDJ01000167.1 Protein Homology CDS 71551 72561 . + 0 ID=cds-WP_001059922.1;Parent=gene-AD08_RS07935;Dbxref=Genbank:WP_001059922.1;Name=WP_001059922.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=AD08_RS07935;product=hydrogenase maturation carbamoyl dehydratase HypE;protein_id=WP_001059922.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 72635 74713 . + . ID=gene-AD08_RS07930;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AD08_RS07930;old_locus_tag=AD08_3077 NZ_JHDJ01000167.1 Protein Homology CDS 72635 74713 . + 0 ID=cds-WP_001301332.1;Parent=gene-AD08_RS07930;Dbxref=Genbank:WP_001301332.1;Name=WP_001301332.1;gbkey=CDS;gene=flhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417211.1;locus_tag=AD08_RS07930;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_001301332.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 74750 75103 . - . ID=gene-AD08_RS07925;Name=AD08_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07925;old_locus_tag=AD08_3078 NZ_JHDJ01000167.1 Protein Homology CDS 74750 75103 . - 0 ID=cds-WP_000015497.1;Parent=gene-AD08_RS07925;Dbxref=Genbank:WP_000015497.1;Name=WP_000015497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417212.1;locus_tag=AD08_RS07925;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_000015497.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 75180 75314 . - . ID=gene-AD08_RS31755;Name=AD08_RS31755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31755;old_locus_tag=AD08_3079 NZ_JHDJ01000167.1 Protein Homology CDS 75180 75314 . - 0 ID=cds-WP_000611932.1;Parent=gene-AD08_RS31755;Dbxref=Genbank:WP_000611932.1;Name=WP_000611932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439274.1;locus_tag=AD08_RS31755;product=hypothetical protein;protein_id=WP_000611932.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 75390 77951 . + . ID=gene-AD08_RS07920;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=AD08_RS07920;old_locus_tag=AD08_3080 NZ_JHDJ01000167.1 Protein Homology CDS 75390 77951 . + 0 ID=cds-WP_001272928.1;Parent=gene-AD08_RS07920;Dbxref=Genbank:WP_001272928.1;Name=WP_001272928.1;gbkey=CDS;gene=mutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417213.1;locus_tag=AD08_RS07920;product=DNA mismatch repair protein MutS;protein_id=WP_001272928.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 78057 78713 . + . ID=gene-AD08_RS07915;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=AD08_RS07915;old_locus_tag=AD08_3081 NZ_JHDJ01000167.1 Protein Homology CDS 78057 78713 . + 0 ID=cds-WP_001141322.1;Parent=gene-AD08_RS07915;Dbxref=Genbank:WP_001141322.1;Name=WP_001141322.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417214.1;locus_tag=AD08_RS07915;product=protein-serine/threonine phosphatase;protein_id=WP_001141322.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 78764 79561 . - . ID=gene-AD08_RS07910;Name=AD08_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07910;old_locus_tag=AD08_3082 NZ_JHDJ01000167.1 Protein Homology CDS 78764 79561 . - 0 ID=cds-WP_001272547.1;Parent=gene-AD08_RS07910;Dbxref=Genbank:WP_001272547.1;Name=WP_001272547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708537.1;locus_tag=AD08_RS07910;product=DeoR/GlpR transcriptional regulator;protein_id=WP_001272547.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 79727 80635 . + . ID=gene-AD08_RS07905;Name=AD08_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07905;old_locus_tag=AD08_3083 NZ_JHDJ01000167.1 Protein Homology CDS 79727 80635 . + 0 ID=cds-WP_000847979.1;Parent=gene-AD08_RS07905;Dbxref=Genbank:WP_000847979.1;Name=WP_000847979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417216.1;locus_tag=AD08_RS07905;product=NAD(P)-dependent oxidoreductase;protein_id=WP_000847979.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 80632 81894 . + . ID=gene-AD08_RS07900;Name=AD08_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07900;old_locus_tag=AD08_3084 NZ_JHDJ01000167.1 Protein Homology CDS 80632 81894 . + 0 ID=cds-WP_000590403.1;Parent=gene-AD08_RS07900;Dbxref=Genbank:WP_000590403.1;Name=WP_000590403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001649192.1;locus_tag=AD08_RS07900;product=four-carbon acid sugar kinase family protein;protein_id=WP_000590403.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 81891 82529 . + . ID=gene-AD08_RS07895;Name=AD08_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07895;old_locus_tag=AD08_3085 NZ_JHDJ01000167.1 Protein Homology CDS 81891 82529 . + 0 ID=cds-WP_001278994.1;Parent=gene-AD08_RS07895;Dbxref=Genbank:WP_001278994.1;Name=WP_001278994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417218.1;locus_tag=AD08_RS07895;product=aldolase;protein_id=WP_001278994.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 82534 83310 . + . ID=gene-AD08_RS07890;Name=AD08_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07890;old_locus_tag=AD08_3086 NZ_JHDJ01000167.1 Protein Homology CDS 82534 83310 . + 0 ID=cds-WP_001136925.1;Parent=gene-AD08_RS07890;Dbxref=Genbank:WP_001136925.1;Name=WP_001136925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417219.1;locus_tag=AD08_RS07890;product=HPr family phosphocarrier protein;protein_id=WP_001136925.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 83399 84763 . + . ID=gene-AD08_RS07885;Name=AD08_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07885;old_locus_tag=AD08_3087 NZ_JHDJ01000167.1 Protein Homology CDS 83399 84763 . + 0 ID=cds-WP_000104459.1;Parent=gene-AD08_RS07885;Dbxref=Genbank:WP_000104459.1;Name=WP_000104459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417220.1;locus_tag=AD08_RS07885;product=GntP family transporter;protein_id=WP_000104459.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 84857 85849 . - . ID=gene-AD08_RS07880;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=AD08_RS07880;old_locus_tag=AD08_3088 NZ_JHDJ01000167.1 Protein Homology CDS 84857 85849 . - 0 ID=cds-WP_000081550.1;Parent=gene-AD08_RS07880;Dbxref=Genbank:WP_000081550.1;Name=WP_000081550.1;gbkey=CDS;gene=rpoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311622.1;locus_tag=AD08_RS07880;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081550.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 85912 87051 . - . ID=gene-AD08_RS07875;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=AD08_RS07875;old_locus_tag=AD08_3089 NZ_JHDJ01000167.1 Protein Homology CDS 85912 87051 . - 0 ID=cds-WP_024172487.1;Parent=gene-AD08_RS07875;Dbxref=Genbank:WP_024172487.1;Name=WP_024172487.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417222.1;locus_tag=AD08_RS07875;product=murein hydrolase activator NlpD;protein_id=WP_024172487.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 87191 87817 . - . ID=gene-AD08_RS07870;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=AD08_RS07870;old_locus_tag=AD08_3090 NZ_JHDJ01000167.1 Protein Homology CDS 87191 87817 . - 0 ID=cds-WP_000254708.1;Parent=gene-AD08_RS07870;Dbxref=Genbank:WP_000254708.1;Name=WP_000254708.1;gbkey=CDS;gene=pcm;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=AD08_RS07870;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_000254708.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 87811 88572 . - . ID=gene-AD08_RS07865;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=AD08_RS07865;old_locus_tag=AD08_3091 NZ_JHDJ01000167.1 Protein Homology CDS 87811 88572 . - 0 ID=cds-WP_001295182.1;Parent=gene-AD08_RS07865;Dbxref=Genbank:WP_001295182.1;Name=WP_001295182.1;gbkey=CDS;gene=surE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311625.1;locus_tag=AD08_RS07865;product=5'/3'-nucleotidase SurE;protein_id=WP_001295182.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 88553 89602 . - . ID=gene-AD08_RS07860;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=AD08_RS07860;old_locus_tag=AD08_3092 NZ_JHDJ01000167.1 Protein Homology CDS 88553 89602 . - 0 ID=cds-WP_000568946.1;Parent=gene-AD08_RS07860;Dbxref=Genbank:WP_000568946.1;Name=WP_000568946.1;gbkey=CDS;gene=truD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417225.1;locus_tag=AD08_RS07860;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000568946.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 89599 90078 . - . ID=gene-AD08_RS07855;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AD08_RS07855;old_locus_tag=AD08_3093 NZ_JHDJ01000167.1 Protein Homology CDS 89599 90078 . - 0 ID=cds-WP_001219242.1;Parent=gene-AD08_RS07855;Dbxref=Genbank:WP_001219242.1;Name=WP_001219242.1;gbkey=CDS;gene=ispF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311627.1;locus_tag=AD08_RS07855;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219242.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 90078 90788 . - . ID=gene-AD08_RS07850;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=AD08_RS07850;old_locus_tag=AD08_3094 NZ_JHDJ01000167.1 Protein Homology CDS 90078 90788 . - 0 ID=cds-WP_000246138.1;Parent=gene-AD08_RS07850;Dbxref=Genbank:WP_000246138.1;Name=WP_000246138.1;gbkey=CDS;gene=ispD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417227.1;locus_tag=AD08_RS07850;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000246138.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 90807 91118 . - . ID=gene-AD08_RS07845;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=AD08_RS07845;old_locus_tag=AD08_3095 NZ_JHDJ01000167.1 Protein Homology CDS 90807 91118 . - 0 ID=cds-WP_000517476.1;Parent=gene-AD08_RS07845;Dbxref=Genbank:WP_000517476.1;Name=WP_000517476.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311629.1;locus_tag=AD08_RS07845;product=cell division protein FtsB;protein_id=WP_000517476.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 91312 91635 . - . ID=gene-AD08_RS07840;Name=AD08_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07840;old_locus_tag=AD08_3096 NZ_JHDJ01000167.1 Protein Homology CDS 91312 91635 . - 0 ID=cds-WP_001246104.1;Parent=gene-AD08_RS07840;Dbxref=Genbank:WP_001246104.1;Name=WP_001246104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417229.1;locus_tag=AD08_RS07840;product=DUF3561 family protein;protein_id=WP_001246104.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 91685 92290 . - . ID=gene-AD08_RS07835;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=AD08_RS07835;old_locus_tag=AD08_3097 NZ_JHDJ01000167.1 Protein Homology CDS 91685 92290 . - 0 ID=cds-WP_001173676.1;Parent=gene-AD08_RS07835;Dbxref=Genbank:WP_001173676.1;Name=WP_001173676.1;gbkey=CDS;gene=cysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311631.1;locus_tag=AD08_RS07835;product=adenylyl-sulfate kinase;protein_id=WP_001173676.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 92290 93717 . - . ID=gene-AD08_RS07830;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=AD08_RS07830;old_locus_tag=AD08_3098 NZ_JHDJ01000167.1 Protein Homology CDS 92290 93717 . - 0 ID=cds-WP_001425962.1;Parent=gene-AD08_RS07830;Dbxref=Genbank:WP_001425962.1;Name=WP_001425962.1;gbkey=CDS;gene=cysN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417231.1;locus_tag=AD08_RS07830;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001425962.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 93719 94627 . - . ID=gene-AD08_RS07825;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=AD08_RS07825;old_locus_tag=AD08_3099 NZ_JHDJ01000167.1 Protein Homology CDS 93719 94627 . - 0 ID=cds-WP_001474572.1;Parent=gene-AD08_RS07825;Dbxref=Genbank:WP_001474572.1;Name=WP_001474572.1;gbkey=CDS;gene=cysD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417232.1;locus_tag=AD08_RS07825;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_001474572.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq gene 94879 95916 . + . ID=gene-AD08_RS07820;Name=iap;gbkey=Gene;gene=iap;gene_biotype=protein_coding;locus_tag=AD08_RS07820;old_locus_tag=AD08_3100 NZ_JHDJ01000167.1 Protein Homology CDS 94879 95916 . + 0 ID=cds-WP_000490402.1;Parent=gene-AD08_RS07820;Dbxref=Genbank:WP_000490402.1;Name=WP_000490402.1;gbkey=CDS;gene=iap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311634.1;locus_tag=AD08_RS07820;product=alkaline phosphatase isozyme conversion aminopeptidase;protein_id=WP_000490402.1;transl_table=11 NZ_JHDJ01000167.1 RefSeq direct_repeat 95998 96210 . + . ID=id-NZ_JHDJ01000167.1:95998..96210;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=96059..96088;rpt_unit_seq=ccggtttatccccgctggcgcggggaacac NZ_JHDJ01000167.1 RefSeq gene 96288 97400 . + . ID=gene-AD08_RS07815;Name=AD08_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07815;old_locus_tag=AD08_3102 NZ_JHDJ01000167.1 Protein Homology CDS 96288 97400 . + 0 ID=cds-WP_001300563.1-9;Parent=gene-AD08_RS07815;Dbxref=Genbank:WP_001300563.1;Name=WP_001300563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS07815;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 ##sequence-region NZ_JHDJ01000168.1 1 795 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000168.1 RefSeq region 1 795 . + . ID=NZ_JHDJ01000168.1:1..795;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000168.1 RefSeq pseudogene 1 122 . + . ID=gene-AD08_RS07810;Name=AD08_RS07810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS07810;old_locus_tag=AD08_3103;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000168.1 Protein Homology CDS 1 122 . + 2 ID=cds-AD08_RS07810;Parent=gene-AD08_RS07810;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS07810;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000168.1 RefSeq gene 180 795 . + . ID=gene-AD08_RS07805;Name=tauA;end_range=795,.;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=AD08_RS07805;old_locus_tag=AD08_3104;partial=true NZ_JHDJ01000168.1 Protein Homology CDS 180 795 . + 0 ID=cds-WP_032219171.1;Parent=gene-AD08_RS07805;Dbxref=Genbank:WP_032219171.1;Name=WP_032219171.1;end_range=795,.;gbkey=CDS;gene=tauA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308446.1;locus_tag=AD08_RS07805;partial=true;product=taurine ABC transporter substrate-binding protein;protein_id=WP_032219171.1;transl_table=11 ##sequence-region NZ_JHDJ01000169.1 1 118508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000169.1 RefSeq region 1 118508 . + . ID=NZ_JHDJ01000169.1:1..118508;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000169.1 RefSeq gene 1 1068 . + . ID=gene-AD08_RS07800;Name=AD08_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07800;old_locus_tag=AD08_3105;partial=true;start_range=.,1 NZ_JHDJ01000169.1 Protein Homology CDS 1 1068 . + 0 ID=cds-WP_032217610.1-6;Parent=gene-AD08_RS07800;Dbxref=Genbank:WP_032217610.1;Name=WP_032217610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS07800;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032217610.1;start_range=.,1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 1261 1413 . - . ID=gene-AD08_RS07795;Name=AD08_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07795;old_locus_tag=AD08_3106 NZ_JHDJ01000169.1 Protein Homology CDS 1261 1413 . - 0 ID=cds-WP_000956460.1;Parent=gene-AD08_RS07795;Dbxref=Genbank:WP_000956460.1;Name=WP_000956460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311643.1;locus_tag=AD08_RS07795;product=type I toxin-antitoxin system Hok family toxin;protein_id=WP_000956460.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 1678 2412 . - . ID=gene-AD08_RS07790;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=AD08_RS07790;old_locus_tag=AD08_3107 NZ_JHDJ01000169.1 Protein Homology CDS 1678 2412 . - 0 ID=cds-WP_000039863.1;Parent=gene-AD08_RS07790;Dbxref=Genbank:WP_000039863.1;Name=WP_000039863.1;gbkey=CDS;gene=cysH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311644.1;locus_tag=AD08_RS07790;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000039863.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 2486 4198 . - . ID=gene-AD08_RS07785;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=AD08_RS07785;old_locus_tag=AD08_3108 NZ_JHDJ01000169.1 Protein Homology CDS 2486 4198 . - 0 ID=cds-WP_001655777.1;Parent=gene-AD08_RS07785;Dbxref=Genbank:WP_001655777.1;Name=WP_001655777.1;gbkey=CDS;gene=cysI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=AD08_RS07785;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_001655777.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 4198 5997 . - . ID=gene-AD08_RS07780;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=AD08_RS07780;old_locus_tag=AD08_3109 NZ_JHDJ01000169.1 Protein Homology CDS 4198 5997 . - 0 ID=cds-WP_000211907.1;Parent=gene-AD08_RS07780;Dbxref=Genbank:WP_000211907.1;Name=WP_000211907.1;gbkey=CDS;gene=cysJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417244.1;locus_tag=AD08_RS07780;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_000211907.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 6313 6678 . + . ID=gene-AD08_RS07775;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=AD08_RS07775;old_locus_tag=AD08_3111 NZ_JHDJ01000169.1 Protein Homology CDS 6313 6678 . + 0 ID=cds-WP_000987944.1;Parent=gene-AD08_RS07775;Dbxref=Genbank:WP_000987944.1;Name=WP_000987944.1;gbkey=CDS;gene=queD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311647.1;locus_tag=AD08_RS07775;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000987944.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 6756 8027 . + . ID=gene-AD08_RS07770;Name=AD08_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07770;old_locus_tag=AD08_3112 NZ_JHDJ01000169.1 Protein Homology CDS 6756 8027 . + 0 ID=cds-WP_001301334.1;Parent=gene-AD08_RS07770;Dbxref=Genbank:WP_001301334.1;Name=WP_001301334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417246.4;locus_tag=AD08_RS07770;product=FAD-dependent oxidoreductase;protein_id=WP_001301334.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 8018 8278 . + . ID=gene-AD08_RS07765;Name=AD08_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07765;old_locus_tag=AD08_3113 NZ_JHDJ01000169.1 Protein Homology CDS 8018 8278 . + 0 ID=cds-WP_000109529.1;Parent=gene-AD08_RS07765;Dbxref=Genbank:WP_000109529.1;Name=WP_000109529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417247.2;locus_tag=AD08_RS07765;product=ferredoxin family protein;protein_id=WP_000109529.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 8295 8870 . + . ID=gene-AD08_RS07760;Name=AD08_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07760;old_locus_tag=AD08_3114 NZ_JHDJ01000169.1 Protein Homology CDS 8295 8870 . + 0 ID=cds-WP_001130266.1;Parent=gene-AD08_RS07760;Dbxref=Genbank:WP_001130266.1;Name=WP_001130266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417248.1;locus_tag=AD08_RS07760;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_001130266.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 9018 9911 . - . ID=gene-AD08_RS07755;Name=AD08_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07755;old_locus_tag=AD08_3115 NZ_JHDJ01000169.1 Protein Homology CDS 9018 9911 . - 0 ID=cds-WP_000907716.1;Parent=gene-AD08_RS07755;Dbxref=Genbank:WP_000907716.1;Name=WP_000907716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708566.1;locus_tag=AD08_RS07755;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_000907716.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 9875 10654 . - . ID=gene-AD08_RS07750;Name=AD08_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07750;old_locus_tag=AD08_3116 NZ_JHDJ01000169.1 Protein Homology CDS 9875 10654 . - 0 ID=cds-WP_001299652.1;Parent=gene-AD08_RS07750;Dbxref=Genbank:WP_001299652.1;Name=WP_001299652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417250.4;locus_tag=AD08_RS07750;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_001299652.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 10632 12041 . - . ID=gene-AD08_RS07745;Name=AD08_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07745;old_locus_tag=AD08_3117 NZ_JHDJ01000169.1 Protein Homology CDS 10632 12041 . - 0 ID=cds-WP_000147666.1;Parent=gene-AD08_RS07745;Dbxref=Genbank:WP_000147666.1;Name=WP_000147666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708568.1;locus_tag=AD08_RS07745;product=MFS transporter;protein_id=WP_000147666.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 12063 13517 . - . ID=gene-AD08_RS07740;Name=AD08_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07740;old_locus_tag=AD08_3118 NZ_JHDJ01000169.1 Protein Homology CDS 12063 13517 . - 0 ID=cds-WP_000059307.1;Parent=gene-AD08_RS07740;Dbxref=Genbank:WP_000059307.1;Name=WP_000059307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026183.1;locus_tag=AD08_RS07740;product=FAD-binding oxidoreductase;protein_id=WP_000059307.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 13587 14372 . - . ID=gene-AD08_RS07735;Name=AD08_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07735;old_locus_tag=AD08_3119 NZ_JHDJ01000169.1 Protein Homology CDS 13587 14372 . - 0 ID=cds-WP_000021321.1;Parent=gene-AD08_RS07735;Dbxref=Genbank:WP_000021321.1;Name=WP_000021321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417254.4;locus_tag=AD08_RS07735;product=SDR family oxidoreductase;protein_id=WP_000021321.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 14691 15968 . + . ID=gene-AD08_RS07730;Name=AD08_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07730;old_locus_tag=AD08_3120 NZ_JHDJ01000169.1 Protein Homology CDS 14691 15968 . + 0 ID=cds-WP_001164544.1;Parent=gene-AD08_RS07730;Dbxref=Genbank:WP_001164544.1;Name=WP_001164544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417255.1;locus_tag=AD08_RS07730;product=MFS transporter;protein_id=WP_001164544.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 15995 17473 . + . ID=gene-AD08_RS07725;Name=AD08_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07725;old_locus_tag=AD08_3121 NZ_JHDJ01000169.1 Protein Homology CDS 15995 17473 . + 0 ID=cds-WP_000039688.1;Parent=gene-AD08_RS07725;Dbxref=Genbank:WP_000039688.1;Name=WP_000039688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417256.1;locus_tag=AD08_RS07725;product=kinase;protein_id=WP_000039688.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq direct_repeat 18114 18446 . + . ID=id-NZ_JHDJ01000169.1:18114..18446;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=18175..18202;rpt_unit_seq=ggtttatccccgctggcgcggggaacac NZ_JHDJ01000169.1 RefSeq gene 18786 19457 . - . ID=gene-AD08_RS07720;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=AD08_RS07720;old_locus_tag=AD08_3123 NZ_JHDJ01000169.1 Protein Homology CDS 18786 19457 . - 0 ID=cds-WP_001199973.1;Parent=gene-AD08_RS07720;Dbxref=Genbank:WP_001199973.1;Name=WP_001199973.1;gbkey=CDS;gene=queE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=AD08_RS07720;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199973.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 19596 19736 . + . ID=gene-AD08_RS07715;Name=AD08_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07715;old_locus_tag=AD08_3124 NZ_JHDJ01000169.1 Protein Homology CDS 19596 19736 . + 0 ID=cds-WP_001288228.1;Parent=gene-AD08_RS07715;Dbxref=Genbank:WP_001288228.1;Name=WP_001288228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791252.1;locus_tag=AD08_RS07715;product=hypothetical protein;protein_id=WP_001288228.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 19750 20622 . + . ID=gene-AD08_RS07710;Name=AD08_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07710;old_locus_tag=AD08_3125 NZ_JHDJ01000169.1 Protein Homology CDS 19750 20622 . + 0 ID=cds-WP_001268460.1;Parent=gene-AD08_RS07710;Dbxref=Genbank:WP_001268460.1;Name=WP_001268460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417258.4;locus_tag=AD08_RS07710;product=YgcG family protein;protein_id=WP_001268460.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 20682 21980 . - . ID=gene-AD08_RS07705;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AD08_RS07705;old_locus_tag=AD08_3126 NZ_JHDJ01000169.1 Protein Homology CDS 20682 21980 . - 0 ID=cds-WP_000036723.1;Parent=gene-AD08_RS07705;Dbxref=Genbank:WP_000036723.1;Name=WP_000036723.1;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311666.1;locus_tag=AD08_RS07705;product=phosphopyruvate hydratase;protein_id=WP_000036723.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 22064 23704 . - . ID=gene-AD08_RS07700;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AD08_RS07700;old_locus_tag=AD08_3127 NZ_JHDJ01000169.1 Protein Homology CDS 22064 23704 . - 0 ID=cds-WP_032219173.1;Parent=gene-AD08_RS07700;Dbxref=Genbank:WP_032219173.1;Name=WP_032219173.1;gbkey=CDS;gene=pyrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=AD08_RS07700;product=CTP synthase (glutamine hydrolyzing);protein_id=WP_032219173.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 23932 24723 . - . ID=gene-AD08_RS07695;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=AD08_RS07695;old_locus_tag=AD08_3128 NZ_JHDJ01000169.1 Protein Homology CDS 23932 24723 . - 0 ID=cds-WP_001071648.1;Parent=gene-AD08_RS07695;Dbxref=Genbank:WP_001071648.1;Name=WP_001071648.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311668.1;locus_tag=AD08_RS07695;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_001071648.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 24794 25129 . - . ID=gene-AD08_RS07690;Name=mazF;gbkey=Gene;gene=mazF;gene_biotype=protein_coding;locus_tag=AD08_RS07690;old_locus_tag=AD08_3129 NZ_JHDJ01000169.1 Protein Homology CDS 24794 25129 . - 0 ID=cds-WP_000254738.1;Parent=gene-AD08_RS07690;Dbxref=Genbank:WP_000254738.1;Name=WP_000254738.1;gbkey=CDS;gene=mazF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311669.1;locus_tag=AD08_RS07690;product=endoribonuclease MazF;protein_id=WP_000254738.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 25129 25377 . - . ID=gene-AD08_RS07685;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=AD08_RS07685;old_locus_tag=AD08_3130 NZ_JHDJ01000169.1 Protein Homology CDS 25129 25377 . - 0 ID=cds-WP_000581937.1;Parent=gene-AD08_RS07685;Dbxref=Genbank:WP_000581937.1;Name=WP_000581937.1;gbkey=CDS;gene=mazE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311670.1;locus_tag=AD08_RS07685;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_000581937.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 25455 27689 . - . ID=gene-AD08_RS07680;Name=AD08_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07680;old_locus_tag=AD08_3131 NZ_JHDJ01000169.1 Protein Homology CDS 25455 27689 . - 0 ID=cds-WP_000226815.1;Parent=gene-AD08_RS07680;Dbxref=Genbank:WP_000226815.1;Name=WP_000226815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311671.1;locus_tag=AD08_RS07680;product=GTP pyrophosphokinase;protein_id=WP_000226815.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 27737 29038 . - . ID=gene-AD08_RS07675;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=AD08_RS07675;old_locus_tag=AD08_3132 NZ_JHDJ01000169.1 Protein Homology CDS 27737 29038 . - 0 ID=cds-WP_000046812.1;Parent=gene-AD08_RS07675;Dbxref=Genbank:WP_000046812.1;Name=WP_000046812.1;gbkey=CDS;gene=rlmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417265.1;locus_tag=AD08_RS07675;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046812.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 29095 31851 . + . ID=gene-AD08_RS07670;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=AD08_RS07670;old_locus_tag=AD08_3133 NZ_JHDJ01000169.1 Protein Homology CDS 29095 31851 . + 0 ID=cds-WP_032219175.1;Parent=gene-AD08_RS07670;Dbxref=Genbank:WP_032219175.1;Name=WP_032219175.1;gbkey=CDS;gene=barA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311673.1;locus_tag=AD08_RS07670;product=two-component sensor histidine kinase BarA;protein_id=WP_032219175.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 32083 33423 . - . ID=gene-AD08_RS07665;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=AD08_RS07665;old_locus_tag=AD08_3135 NZ_JHDJ01000169.1 Protein Homology CDS 32083 33423 . - 0 ID=cds-WP_000098255.1;Parent=gene-AD08_RS07665;Dbxref=Genbank:WP_000098255.1;Name=WP_000098255.1;gbkey=CDS;gene=gudD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=AD08_RS07665;product=glucarate dehydratase;protein_id=WP_000098255.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 33444 34784 . - . ID=gene-AD08_RS07660;Name=AD08_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07660;old_locus_tag=AD08_3136 NZ_JHDJ01000169.1 Protein Homology CDS 33444 34784 . - 0 ID=cds-WP_000235391.1;Parent=gene-AD08_RS07660;Dbxref=Genbank:WP_000235391.1;Name=WP_000235391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417268.1;locus_tag=AD08_RS07660;product=glucarate dehydratase-related protein;protein_id=WP_000235391.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 34786 36138 . - . ID=gene-AD08_RS07655;Name=AD08_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07655;old_locus_tag=AD08_3137 NZ_JHDJ01000169.1 Protein Homology CDS 34786 36138 . - 0 ID=cds-WP_000097072.1;Parent=gene-AD08_RS07655;Dbxref=Genbank:WP_000097072.1;Name=WP_000097072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417269.1;locus_tag=AD08_RS07655;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097072.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 36573 37022 . - . ID=gene-AD08_RS07650;Name=AD08_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07650;old_locus_tag=AD08_3139 NZ_JHDJ01000169.1 Protein Homology CDS 36573 37022 . - 0 ID=cds-WP_000807753.1;Parent=gene-AD08_RS07650;Dbxref=Genbank:WP_000807753.1;Name=WP_000807753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311677.1;locus_tag=AD08_RS07650;product=flavodoxin;protein_id=WP_000807753.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 37040 37822 . - . ID=gene-AD08_RS07645;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=AD08_RS07645;old_locus_tag=AD08_3140 NZ_JHDJ01000169.1 Protein Homology CDS 37040 37822 . - 0 ID=cds-WP_000890001.1;Parent=gene-AD08_RS07645;Dbxref=Genbank:WP_000890001.1;Name=WP_000890001.1;gbkey=CDS;gene=truC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417271.1;locus_tag=AD08_RS07645;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890001.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 37822 38151 . - . ID=gene-AD08_RS07640;Name=AD08_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07640;old_locus_tag=AD08_3141 NZ_JHDJ01000169.1 Protein Homology CDS 37822 38151 . - 0 ID=cds-WP_000206990.1;Parent=gene-AD08_RS07640;Dbxref=Genbank:WP_000206990.1;Name=WP_000206990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417272.1;locus_tag=AD08_RS07640;product=YqcC family protein;protein_id=WP_000206990.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 38773 39318 . - . ID=gene-AD08_RS07635;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=AD08_RS07635;old_locus_tag=AD08_3142 NZ_JHDJ01000169.1 Protein Homology CDS 38773 39318 . - 0 ID=cds-WP_000342431.1;Parent=gene-AD08_RS07635;Dbxref=Genbank:WP_000342431.1;Name=WP_000342431.1;gbkey=CDS;gene=syd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417273.1;locus_tag=AD08_RS07635;product=SecY-interacting protein;protein_id=WP_000342431.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 39386 40234 . + . ID=gene-AD08_RS07630;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=AD08_RS07630;old_locus_tag=AD08_3143 NZ_JHDJ01000169.1 Protein Homology CDS 39386 40234 . + 0 ID=cds-WP_000100421.1;Parent=gene-AD08_RS07630;Dbxref=Genbank:WP_000100421.1;Name=WP_000100421.1;gbkey=CDS;gene=queF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417274.1;locus_tag=AD08_RS07630;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_000100421.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 40346 41710 . + . ID=gene-AD08_RS07625;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=AD08_RS07625;old_locus_tag=AD08_3144 NZ_JHDJ01000169.1 Protein Homology CDS 40346 41710 . + 0 ID=cds-WP_000627995.1;Parent=gene-AD08_RS07625;Dbxref=Genbank:WP_000627995.1;Name=WP_000627995.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311682.1;locus_tag=AD08_RS07625;product=nucleotide 5'-monophosphate nucleosidase;protein_id=WP_000627995.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 42267 43556 . + . ID=gene-AD08_RS07620;Name=AD08_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07620;old_locus_tag=AD08_3145 NZ_JHDJ01000169.1 Protein Homology CDS 42267 43556 . + 0 ID=cds-WP_000450476.1;Parent=gene-AD08_RS07620;Dbxref=Genbank:WP_000450476.1;Name=WP_000450476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311683.1;locus_tag=AD08_RS07620;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450476.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 43614 44981 . + . ID=gene-AD08_RS07615;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=AD08_RS07615;old_locus_tag=AD08_3146 NZ_JHDJ01000169.1 Protein Homology CDS 43614 44981 . + 0 ID=cds-WP_000626422.1;Parent=gene-AD08_RS07615;Dbxref=Genbank:WP_000626422.1;Name=WP_000626422.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417277.1;locus_tag=AD08_RS07615;product=L-serine ammonia-lyase II;protein_id=WP_000626422.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 45003 45848 . + . ID=gene-AD08_RS07610;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=AD08_RS07610;old_locus_tag=AD08_3147 NZ_JHDJ01000169.1 Protein Homology CDS 45003 45848 . + 0 ID=cds-WP_001214598.1;Parent=gene-AD08_RS07610;Dbxref=Genbank:WP_001214598.1;Name=WP_001214598.1;gbkey=CDS;gene=xni;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311685.3;locus_tag=AD08_RS07610;product=flap endonuclease Xni;protein_id=WP_001214598.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 45903 47051 . - . ID=gene-AD08_RS07605;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=AD08_RS07605;old_locus_tag=AD08_3148 NZ_JHDJ01000169.1 Protein Homology CDS 45903 47051 . - 0 ID=cds-WP_000013588.1;Parent=gene-AD08_RS07605;Dbxref=Genbank:WP_000013588.1;Name=WP_000013588.1;gbkey=CDS;gene=fucO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417279.2;locus_tag=AD08_RS07605;product=lactaldehyde reductase;protein_id=WP_000013588.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 47079 47726 . - . ID=gene-AD08_RS07600;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=AD08_RS07600;old_locus_tag=AD08_3149 NZ_JHDJ01000169.1 Protein Homology CDS 47079 47726 . - 0 ID=cds-WP_000440781.1;Parent=gene-AD08_RS07600;Dbxref=Genbank:WP_000440781.1;Name=WP_000440781.1;gbkey=CDS;gene=fucA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417280.1;locus_tag=AD08_RS07600;product=L-fuculose-phosphate aldolase;protein_id=WP_000440781.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 48273 49589 . + . ID=gene-AD08_RS07595;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=AD08_RS07595;old_locus_tag=AD08_3150 NZ_JHDJ01000169.1 Protein Homology CDS 48273 49589 . + 0 ID=cds-WP_032219179.1;Parent=gene-AD08_RS07595;Dbxref=Genbank:WP_032219179.1;Name=WP_032219179.1;gbkey=CDS;gene=fucP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=AD08_RS07595;product=L-fucose:H+ symporter permease;protein_id=WP_032219179.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 49622 51397 . + . ID=gene-AD08_RS07590;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=AD08_RS07590;old_locus_tag=AD08_3151 NZ_JHDJ01000169.1 Protein Homology CDS 49622 51397 . + 0 ID=cds-WP_000724153.1;Parent=gene-AD08_RS07590;Dbxref=Genbank:WP_000724153.1;Name=WP_000724153.1;gbkey=CDS;gene=fucI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417282.1;locus_tag=AD08_RS07590;product=L-fucose isomerase;protein_id=WP_000724153.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 51506 52924 . + . ID=gene-AD08_RS07585;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=AD08_RS07585;old_locus_tag=AD08_3152 NZ_JHDJ01000169.1 Protein Homology CDS 51506 52924 . + 0 ID=cds-WP_000808392.1;Parent=gene-AD08_RS07585;Dbxref=Genbank:WP_000808392.1;Name=WP_000808392.1;gbkey=CDS;gene=fucK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417283.2;locus_tag=AD08_RS07585;product=L-fuculokinase;protein_id=WP_000808392.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 52926 53348 . + . ID=gene-AD08_RS07580;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=AD08_RS07580;old_locus_tag=AD08_3153 NZ_JHDJ01000169.1 Protein Homology CDS 52926 53348 . + 0 ID=cds-WP_000920840.1;Parent=gene-AD08_RS07580;Dbxref=Genbank:WP_000920840.1;Name=WP_000920840.1;gbkey=CDS;gene=fucU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311691.1;locus_tag=AD08_RS07580;product=L-fucose mutarotase;protein_id=WP_000920840.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 53406 54137 . + . ID=gene-AD08_RS07575;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=AD08_RS07575;old_locus_tag=AD08_3154 NZ_JHDJ01000169.1 Protein Homology CDS 53406 54137 . + 0 ID=cds-WP_000642344.1;Parent=gene-AD08_RS07575;Dbxref=Genbank:WP_000642344.1;Name=WP_000642344.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417285.1;locus_tag=AD08_RS07575;product=L-fucose operon activator;protein_id=WP_000642344.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 54181 55281 . - . ID=gene-AD08_RS07570;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=AD08_RS07570;old_locus_tag=AD08_3155 NZ_JHDJ01000169.1 Protein Homology CDS 54181 55281 . - 0 ID=cds-WP_001425987.1;Parent=gene-AD08_RS07570;Dbxref=Genbank:WP_001425987.1;Name=WP_001425987.1;gbkey=CDS;gene=rlmM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311693.1;locus_tag=AD08_RS07570;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001425987.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 55274 55669 . - . ID=gene-AD08_RS07565;Name=AD08_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07565;old_locus_tag=AD08_3156 NZ_JHDJ01000169.1 Protein Homology CDS 55274 55669 . - 0 ID=cds-WP_000203905.1;Parent=gene-AD08_RS07565;Dbxref=Genbank:WP_000203905.1;Name=WP_000203905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311694.1;locus_tag=AD08_RS07565;product=DUF423 domain-containing protein;protein_id=WP_000203905.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 55688 56605 . - . ID=gene-AD08_RS07560;Name=AD08_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07560;old_locus_tag=AD08_3157 NZ_JHDJ01000169.1 Protein Homology CDS 55688 56605 . - 0 ID=cds-WP_000044401.1;Parent=gene-AD08_RS07560;Dbxref=Genbank:WP_000044401.1;Name=WP_000044401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=AD08_RS07560;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044401.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 56956 57183 . - . ID=gene-AD08_RS07555;Name=AD08_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07555;old_locus_tag=AD08_3158 NZ_JHDJ01000169.1 Protein Homology CDS 56956 57183 . - 0 ID=cds-WP_000750398.1;Parent=gene-AD08_RS07555;Dbxref=Genbank:WP_000750398.1;Name=WP_000750398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417289.2;locus_tag=AD08_RS07555;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750398.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 57375 58580 . + . ID=gene-AD08_RS07550;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=AD08_RS07550;old_locus_tag=AD08_3159 NZ_JHDJ01000169.1 Protein Homology CDS 57375 58580 . + 0 ID=cds-WP_001300698.1;Parent=gene-AD08_RS07550;Dbxref=Genbank:WP_001300698.1;Name=WP_001300698.1;gbkey=CDS;gene=csdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417290.1;locus_tag=AD08_RS07550;product=cysteine desulfurase CsdA;protein_id=WP_001300698.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 58580 59023 . + . ID=gene-AD08_RS07545;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=AD08_RS07545;old_locus_tag=AD08_3160 NZ_JHDJ01000169.1 Protein Homology CDS 58580 59023 . + 0 ID=cds-WP_000184261.1;Parent=gene-AD08_RS07545;Dbxref=Genbank:WP_000184261.1;Name=WP_000184261.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311698.1;locus_tag=AD08_RS07545;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184261.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 59074 59880 . - . ID=gene-AD08_RS07540;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=AD08_RS07540;old_locus_tag=AD08_3161 NZ_JHDJ01000169.1 Protein Homology CDS 59074 59880 . - 0 ID=cds-WP_000117728.1;Parent=gene-AD08_RS07540;Dbxref=Genbank:WP_000117728.1;Name=WP_000117728.1;gbkey=CDS;gene=tcdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417292.1;locus_tag=AD08_RS07540;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117728.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 60119 61216 . - . ID=gene-AD08_RS07535;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=AD08_RS07535;old_locus_tag=AD08_3162 NZ_JHDJ01000169.1 Protein Homology CDS 60119 61216 . - 0 ID=cds-WP_000678646.1;Parent=gene-AD08_RS07535;Dbxref=Genbank:WP_000678646.1;Name=WP_000678646.1;gbkey=CDS;gene=mltA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=AD08_RS07535;product=murein transglycosylase A;protein_id=WP_000678646.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 61425 61501 . + . ID=gene-AD08_RS31290;Name=AD08_RS31290;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS31290;old_locus_tag=AD08_3163 NZ_JHDJ01000169.1 tRNAscan-SE tRNA 61425 61501 . + . ID=rna-AD08_RS31290;Parent=gene-AD08_RS31290;anticodon=(pos:61459..61461);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS31290;product=tRNA-Met NZ_JHDJ01000169.1 tRNAscan-SE exon 61425 61501 . + . ID=exon-AD08_RS31290-1;Parent=rna-AD08_RS31290;anticodon=(pos:61459..61461);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS31290;product=tRNA-Met NZ_JHDJ01000169.1 RefSeq gene 61535 61611 . + . ID=gene-AD08_RS07525;Name=AD08_RS07525;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS07525;old_locus_tag=AD08_3164 NZ_JHDJ01000169.1 tRNAscan-SE tRNA 61535 61611 . + . ID=rna-AD08_RS07525;Parent=gene-AD08_RS07525;anticodon=(pos:61569..61571);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS07525;product=tRNA-Met NZ_JHDJ01000169.1 tRNAscan-SE exon 61535 61611 . + . ID=exon-AD08_RS07525-1;Parent=rna-AD08_RS07525;anticodon=(pos:61569..61571);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS07525;product=tRNA-Met NZ_JHDJ01000169.1 RefSeq gene 61645 61721 . + . ID=gene-AD08_RS30675;Name=AD08_RS30675;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS30675;old_locus_tag=AD08_3165 NZ_JHDJ01000169.1 tRNAscan-SE tRNA 61645 61721 . + . ID=rna-AD08_RS30675;Parent=gene-AD08_RS30675;anticodon=(pos:61679..61681);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS30675;product=tRNA-Met NZ_JHDJ01000169.1 tRNAscan-SE exon 61645 61721 . + . ID=exon-AD08_RS30675-1;Parent=rna-AD08_RS30675;anticodon=(pos:61679..61681);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS30675;product=tRNA-Met NZ_JHDJ01000169.1 RefSeq gene 61755 61831 . + . ID=gene-AD08_RS07515;Name=AD08_RS07515;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS07515;old_locus_tag=AD08_3166 NZ_JHDJ01000169.1 tRNAscan-SE tRNA 61755 61831 . + . ID=rna-AD08_RS07515;Parent=gene-AD08_RS07515;anticodon=(pos:61789..61791);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS07515;product=tRNA-Met NZ_JHDJ01000169.1 tRNAscan-SE exon 61755 61831 . + . ID=exon-AD08_RS07515-1;Parent=rna-AD08_RS07515;anticodon=(pos:61789..61791);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS07515;product=tRNA-Met NZ_JHDJ01000169.1 RefSeq gene 61905 63158 . - . ID=gene-AD08_RS07510;Name=AD08_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07510;old_locus_tag=AD08_3167 NZ_JHDJ01000169.1 Protein Homology CDS 61905 63158 . - 0 ID=cds-WP_000016907.1-2;Parent=gene-AD08_RS07510;Dbxref=Genbank:WP_000016907.1;Name=WP_000016907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311701.2;locus_tag=AD08_RS07510;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000016907.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 63390 64721 . + . ID=gene-AD08_RS07505;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=AD08_RS07505;old_locus_tag=AD08_3168 NZ_JHDJ01000169.1 Protein Homology CDS 63390 64721 . + 0 ID=cds-WP_032219180.1;Parent=gene-AD08_RS07505;Dbxref=Genbank:WP_032219180.1;Name=WP_032219180.1;gbkey=CDS;gene=argA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311702.1;locus_tag=AD08_RS07505;product=amino-acid N-acetyltransferase;protein_id=WP_032219180.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 64783 66609 . - . ID=gene-AD08_RS07500;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=AD08_RS07500;old_locus_tag=AD08_3169 NZ_JHDJ01000169.1 Protein Homology CDS 64783 66609 . - 0 ID=cds-WP_001639822.1;Parent=gene-AD08_RS07500;Dbxref=Genbank:WP_001639822.1;Name=WP_001639822.1;gbkey=CDS;gene=recD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417296.1;locus_tag=AD08_RS07500;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_001639822.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 66609 70151 . - . ID=gene-AD08_RS07495;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=AD08_RS07495;old_locus_tag=AD08_3170 NZ_JHDJ01000169.1 Protein Homology CDS 66609 70151 . - 0 ID=cds-WP_032219182.1;Parent=gene-AD08_RS07495;Dbxref=Genbank:WP_032219182.1;Name=WP_032219182.1;gbkey=CDS;gene=recB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417297.1;locus_tag=AD08_RS07495;product=exodeoxyribonuclease V subunit beta;protein_id=WP_032219182.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq pseudogene 70144 73031 . - . ID=gene-AD08_RS0126515;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=pseudogene;locus_tag=AD08_RS0126515;pseudo=true NZ_JHDJ01000169.1 Protein Homology CDS 70144 73031 . - 0 ID=cds-AD08_RS0126515;Parent=gene-AD08_RS0126515;Note=frameshifted;gbkey=CDS;gene=ptrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417298.1;locus_tag=AD08_RS0126515;product=pitrilysin;pseudo=true;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 73207 76575 . - . ID=gene-AD08_RS07490;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=AD08_RS07490;old_locus_tag=AD08_3173 NZ_JHDJ01000169.1 Protein Homology CDS 73207 76575 . - 0 ID=cds-WP_032219184.1;Parent=gene-AD08_RS07490;Dbxref=Genbank:WP_032219184.1;Name=WP_032219184.1;gbkey=CDS;gene=recC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417299.1;locus_tag=AD08_RS07490;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_032219184.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 76588 76911 . - . ID=gene-AD08_RS07485;Name=AD08_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07485;old_locus_tag=AD08_3174 NZ_JHDJ01000169.1 Protein Homology CDS 76588 76911 . - 0 ID=cds-WP_001276460.1;Parent=gene-AD08_RS07485;Dbxref=Genbank:WP_001276460.1;Name=WP_001276460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417300.1;locus_tag=AD08_RS07485;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_001276460.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 76896 77303 . - . ID=gene-AD08_RS07480;Name=AD08_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07480;old_locus_tag=AD08_3175 NZ_JHDJ01000169.1 Protein Homology CDS 76896 77303 . - 0 ID=cds-WP_001078380.1;Parent=gene-AD08_RS07480;Dbxref=Genbank:WP_001078380.1;Name=WP_001078380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417301.4;locus_tag=AD08_RS07480;product=DUF2509 family protein;protein_id=WP_001078380.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 77300 77863 . - . ID=gene-AD08_RS07475;Name=AD08_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07475;old_locus_tag=AD08_3176 NZ_JHDJ01000169.1 Protein Homology CDS 77300 77863 . - 0 ID=cds-WP_001144315.1;Parent=gene-AD08_RS07475;Dbxref=Genbank:WP_001144315.1;Name=WP_001144315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417302.1;locus_tag=AD08_RS07475;product=prepilin peptidase-dependent protein;protein_id=WP_001144315.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 77854 78324 . - . ID=gene-AD08_RS07470;Name=AD08_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07470;old_locus_tag=AD08_3177 NZ_JHDJ01000169.1 Protein Homology CDS 77854 78324 . - 0 ID=cds-WP_000857051.1;Parent=gene-AD08_RS07470;Dbxref=Genbank:WP_000857051.1;Name=WP_000857051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417303.1;locus_tag=AD08_RS07470;product=prepilin peptidase-dependent protein;protein_id=WP_000857051.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 78508 79302 . - . ID=gene-AD08_RS07465;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=AD08_RS07465;old_locus_tag=AD08_3179 NZ_JHDJ01000169.1 Protein Homology CDS 78508 79302 . - 0 ID=cds-WP_000816232.1;Parent=gene-AD08_RS07465;Dbxref=Genbank:WP_000816232.1;Name=WP_000816232.1;gbkey=CDS;gene=thyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=AD08_RS07465;product=thymidylate synthase;protein_id=WP_000816232.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 79309 80184 . - . ID=gene-AD08_RS07460;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=AD08_RS07460;old_locus_tag=AD08_3180 NZ_JHDJ01000169.1 Protein Homology CDS 79309 80184 . - 0 ID=cds-WP_000204658.1;Parent=gene-AD08_RS07460;Dbxref=Genbank:WP_000204658.1;Name=WP_000204658.1;gbkey=CDS;gene=lgt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311712.1;locus_tag=AD08_RS07460;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204658.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 80335 82581 . - . ID=gene-AD08_RS07455;Name=AD08_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07455;old_locus_tag=AD08_3181 NZ_JHDJ01000169.1 Protein Homology CDS 80335 82581 . - 0 ID=cds-WP_000957910.1;Parent=gene-AD08_RS07455;Dbxref=Genbank:WP_000957910.1;Name=WP_000957910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417306.1;locus_tag=AD08_RS07455;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957910.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 82594 83124 . - . ID=gene-AD08_RS07450;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=AD08_RS07450;old_locus_tag=AD08_3182 NZ_JHDJ01000169.1 Protein Homology CDS 82594 83124 . - 0 ID=cds-WP_000564489.1;Parent=gene-AD08_RS07450;Dbxref=Genbank:WP_000564489.1;Name=WP_000564489.1;gbkey=CDS;gene=rppH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=AD08_RS07450;product=RNA pyrophosphohydrolase;protein_id=WP_000564489.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 83809 84498 . + . ID=gene-AD08_RS07440;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=AD08_RS07440;old_locus_tag=AD08_3184 NZ_JHDJ01000169.1 Protein Homology CDS 83809 84498 . + 0 ID=cds-WP_000082201.1;Parent=gene-AD08_RS07440;Dbxref=Genbank:WP_000082201.1;Name=WP_000082201.1;gbkey=CDS;gene=mutH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417308.1;locus_tag=AD08_RS07440;product=DNA mismatch repair endonuclease MutH;protein_id=WP_000082201.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 84567 85280 . + . ID=gene-AD08_RS07435;Name=AD08_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07435;old_locus_tag=AD08_3185 NZ_JHDJ01000169.1 Protein Homology CDS 84567 85280 . + 0 ID=cds-WP_000895624.1;Parent=gene-AD08_RS07435;Dbxref=Genbank:WP_000895624.1;Name=WP_000895624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311716.1;locus_tag=AD08_RS07435;product=TerC family protein;protein_id=WP_000895624.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 85418 85636 . + . ID=gene-AD08_RS07430;Name=ygdR;gbkey=Gene;gene=ygdR;gene_biotype=protein_coding;locus_tag=AD08_RS07430;old_locus_tag=AD08_3186 NZ_JHDJ01000169.1 Protein Homology CDS 85418 85636 . + 0 ID=cds-WP_000758655.1;Parent=gene-AD08_RS07430;Dbxref=Genbank:WP_000758655.1;Name=WP_000758655.1;gbkey=CDS;gene=ygdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311717.1;locus_tag=AD08_RS07430;product=lipoprotein YgdR;protein_id=WP_000758655.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 85744 86784 . + . ID=gene-AD08_RS07425;Name=AD08_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07425;old_locus_tag=AD08_3187 NZ_JHDJ01000169.1 Protein Homology CDS 85744 86784 . + 0 ID=cds-WP_001199295.1;Parent=gene-AD08_RS07425;Dbxref=Genbank:WP_001199295.1;Name=WP_001199295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417311.1;locus_tag=AD08_RS07425;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_001199295.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 86816 88009 . - . ID=gene-AD08_RS07420;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=AD08_RS07420;old_locus_tag=AD08_3188 NZ_JHDJ01000169.1 Protein Homology CDS 86816 88009 . - 0 ID=cds-WP_000004616.1;Parent=gene-AD08_RS07420;Dbxref=Genbank:WP_000004616.1;Name=WP_000004616.1;gbkey=CDS;gene=lplT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417312.1;locus_tag=AD08_RS07420;product=lysophospholipid transporter LplT;protein_id=WP_000004616.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 88002 90161 . - . ID=gene-AD08_RS07415;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=AD08_RS07415;old_locus_tag=AD08_3189 NZ_JHDJ01000169.1 Protein Homology CDS 88002 90161 . - 0 ID=cds-WP_000899054.1;Parent=gene-AD08_RS07415;Dbxref=Genbank:WP_000899054.1;Name=WP_000899054.1;gbkey=CDS;gene=aas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417313.1;locus_tag=AD08_RS07415;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000899054.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 90746 91777 . + . ID=gene-AD08_RS07410;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=AD08_RS07410;old_locus_tag=AD08_3190 NZ_JHDJ01000169.1 Protein Homology CDS 90746 91777 . + 0 ID=cds-WP_001469230.1;Parent=gene-AD08_RS07410;Dbxref=Genbank:WP_001469230.1;Name=WP_001469230.1;gbkey=CDS;gene=galR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417314.1;locus_tag=AD08_RS07410;product=HTH-type transcriptional regulator GalR;protein_id=WP_001469230.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 91784 93046 . - . ID=gene-AD08_RS07405;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=AD08_RS07405;old_locus_tag=AD08_3191 NZ_JHDJ01000169.1 Protein Homology CDS 91784 93046 . - 0 ID=cds-WP_032219186.1;Parent=gene-AD08_RS07405;Dbxref=Genbank:WP_032219186.1;Name=WP_032219186.1;gbkey=CDS;gene=lysA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417315.1;locus_tag=AD08_RS07405;product=diaminopimelate decarboxylase;protein_id=WP_032219186.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 93168 94103 . + . ID=gene-AD08_RS07400;Name=lysR;gbkey=Gene;gene=lysR;gene_biotype=protein_coding;locus_tag=AD08_RS07400;old_locus_tag=AD08_3192 NZ_JHDJ01000169.1 Protein Homology CDS 93168 94103 . + 0 ID=cds-WP_000741828.1;Parent=gene-AD08_RS07400;Dbxref=Genbank:WP_000741828.1;Name=WP_000741828.1;gbkey=CDS;gene=lysR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417316.1;locus_tag=AD08_RS07400;product=DNA-binding transcriptional regulator LysR;protein_id=WP_000741828.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 94090 94782 . - . ID=gene-AD08_RS07395;Name=ygeA;gbkey=Gene;gene=ygeA;gene_biotype=protein_coding;locus_tag=AD08_RS07395;old_locus_tag=AD08_3193 NZ_JHDJ01000169.1 Protein Homology CDS 94090 94782 . - 0 ID=cds-WP_000848664.1;Parent=gene-AD08_RS07395;Dbxref=Genbank:WP_000848664.1;Name=WP_000848664.1;gbkey=CDS;gene=ygeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311724.1;locus_tag=AD08_RS07395;product=amino acid racemase;protein_id=WP_000848664.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 94911 96329 . - . ID=gene-AD08_RS07390;Name=AD08_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07390;old_locus_tag=AD08_3194 NZ_JHDJ01000169.1 Protein Homology CDS 94911 96329 . - 0 ID=cds-WP_000256438.1;Parent=gene-AD08_RS07390;Dbxref=Genbank:WP_000256438.1;Name=WP_000256438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311725.1;locus_tag=AD08_RS07390;product=arabinose-proton symporter AraE;protein_id=WP_000256438.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 96644 97405 . - . ID=gene-AD08_RS07385;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=AD08_RS07385;old_locus_tag=AD08_3195 NZ_JHDJ01000169.1 Protein Homology CDS 96644 97405 . - 0 ID=cds-WP_000603502.1;Parent=gene-AD08_RS07385;Dbxref=Genbank:WP_000603502.1;Name=WP_000603502.1;gbkey=CDS;gene=kduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417319.1;locus_tag=AD08_RS07385;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000603502.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 97435 98271 . - . ID=gene-AD08_RS07380;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=AD08_RS07380;old_locus_tag=AD08_3196 NZ_JHDJ01000169.1 Protein Homology CDS 97435 98271 . - 0 ID=cds-WP_000383237.1;Parent=gene-AD08_RS07380;Dbxref=Genbank:WP_000383237.1;Name=WP_000383237.1;gbkey=CDS;gene=kduI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098576.1;locus_tag=AD08_RS07380;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383237.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 98558 99739 . - . ID=gene-AD08_RS07375;Name=AD08_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07375;old_locus_tag=AD08_3197 NZ_JHDJ01000169.1 Protein Homology CDS 98558 99739 . - 0 ID=cds-WP_001508886.1;Parent=gene-AD08_RS07375;Dbxref=Genbank:WP_001508886.1;Name=WP_001508886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417321.2;locus_tag=AD08_RS07375;product=acetyl-CoA C-acetyltransferase;protein_id=WP_001508886.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 99994 101223 . + . ID=gene-AD08_RS07370;Name=AD08_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07370;old_locus_tag=AD08_3198 NZ_JHDJ01000169.1 Protein Homology CDS 99994 101223 . + 0 ID=cds-WP_000065950.1;Parent=gene-AD08_RS07370;Dbxref=Genbank:WP_000065950.1;Name=WP_000065950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311729.1;locus_tag=AD08_RS07370;product=HAAAP family serine/threonine permease;protein_id=WP_000065950.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 101683 102315 . + . ID=gene-AD08_RS07365;Name=AD08_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07365;old_locus_tag=AD08_3199 NZ_JHDJ01000169.1 Protein Homology CDS 101683 102315 . + 0 ID=cds-WP_001305805.1;Parent=gene-AD08_RS07365;Dbxref=Genbank:WP_001305805.1;Name=WP_001305805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417323.2;locus_tag=AD08_RS07365;product=helix-turn-helix transcriptional regulator;protein_id=WP_001305805.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 102649 103458 . + . ID=gene-AD08_RS07360;Name=AD08_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07360;old_locus_tag=AD08_3201 NZ_JHDJ01000169.1 Protein Homology CDS 102649 103458 . + 0 ID=cds-WP_001300710.1;Parent=gene-AD08_RS07360;Dbxref=Genbank:WP_001300710.1;Name=WP_001300710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417324.1;locus_tag=AD08_RS07360;product=transcriptional regulator;protein_id=WP_001300710.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 103451 103933 . + . ID=gene-AD08_RS07355;Name=AD08_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07355;old_locus_tag=AD08_3202 NZ_JHDJ01000169.1 Protein Homology CDS 103451 103933 . + 0 ID=cds-WP_000568339.1;Parent=gene-AD08_RS07355;Dbxref=Genbank:WP_000568339.1;Name=WP_000568339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417325.4;locus_tag=AD08_RS07355;product=hypothetical protein;protein_id=WP_000568339.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 103966 104046 . - . ID=gene-AD08_RS30680;Name=AD08_RS30680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30680 NZ_JHDJ01000169.1 Protein Homology CDS 103966 104046 . - 0 ID=cds-WP_000655820.1;Parent=gene-AD08_RS30680;Dbxref=Genbank:WP_000655820.1;Name=WP_000655820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791253.1;locus_tag=AD08_RS30680;product=hypothetical protein;protein_id=WP_000655820.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 104082 104507 . - . ID=gene-AD08_RS0126525;Name=AD08_RS0126525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126525 NZ_JHDJ01000169.1 Protein Homology CDS 104082 104507 . - 0 ID=cds-WP_000350612.1;Parent=gene-AD08_RS0126525;Dbxref=Genbank:WP_000350612.1;Name=WP_000350612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417326.2;locus_tag=AD08_RS0126525;product=hypothetical protein;protein_id=WP_000350612.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 104701 105147 . + . ID=gene-AD08_RS0126530;Name=AD08_RS0126530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126530 NZ_JHDJ01000169.1 Protein Homology CDS 104701 105147 . + 0 ID=cds-WP_001333802.1;Parent=gene-AD08_RS0126530;Dbxref=Genbank:WP_001333802.1;Name=WP_001333802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135967.1;locus_tag=AD08_RS0126530;product=hypothetical protein;protein_id=WP_001333802.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 105415 105906 . + . ID=gene-AD08_RS07350;Name=AD08_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07350;old_locus_tag=AD08_3205 NZ_JHDJ01000169.1 Protein Homology CDS 105415 105906 . + 0 ID=cds-WP_000102780.1;Parent=gene-AD08_RS07350;Dbxref=Genbank:WP_000102780.1;Name=WP_000102780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417328.1;locus_tag=AD08_RS07350;product=tetratricopeptide repeat protein;protein_id=WP_000102780.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 106241 107617 . + . ID=gene-AD08_RS07345;Name=ygeH;gbkey=Gene;gene=ygeH;gene_biotype=protein_coding;locus_tag=AD08_RS07345;old_locus_tag=AD08_3206 NZ_JHDJ01000169.1 Protein Homology CDS 106241 107617 . + 0 ID=cds-WP_032219189.1;Parent=gene-AD08_RS07345;Dbxref=Genbank:WP_032219189.1;Name=WP_032219189.1;gbkey=CDS;gene=ygeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417329.1;locus_tag=AD08_RS07345;product=HilA family transcriptional regulator YgeH;protein_id=WP_032219189.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 107785 108003 . + . ID=gene-AD08_RS07340;Name=AD08_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07340;old_locus_tag=AD08_3207 NZ_JHDJ01000169.1 Protein Homology CDS 107785 108003 . + 0 ID=cds-WP_000184091.1;Parent=gene-AD08_RS07340;Dbxref=Genbank:WP_000184091.1;Name=WP_000184091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417330.1;locus_tag=AD08_RS07340;product=hypothetical protein;protein_id=WP_000184091.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq pseudogene 108086 108559 . + . ID=gene-AD08_RS0126535;Name=AD08_RS0126535;end_range=108559,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0126535;partial=true;pseudo=true NZ_JHDJ01000169.1 Protein Homology CDS 108086 108559 . + 0 ID=cds-AD08_RS0126535;Parent=gene-AD08_RS0126535;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=108559,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311103.1;locus_tag=AD08_RS0126535;partial=true;product=lytic transglycosylase domain-containing protein;pseudo=true;transl_table=11 NZ_JHDJ01000169.1 RefSeq pseudogene 108607 109239 . - . ID=gene-AD08_RS0126540;Name=AD08_RS0126540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0126540;pseudo=true NZ_JHDJ01000169.1 Protein Homology CDS 108607 109239 . - 0 ID=cds-AD08_RS0126540;Parent=gene-AD08_RS0126540;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311739.1;locus_tag=AD08_RS0126540;product=response regulator transcription factor;pseudo=true;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 109461 110168 . - . ID=gene-AD08_RS31760;Name=AD08_RS31760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31760 NZ_JHDJ01000169.1 Protein Homology CDS 109461 110168 . - 0 ID=cds-WP_001227531.1;Parent=gene-AD08_RS31760;Dbxref=Genbank:WP_001227531.1;Name=WP_001227531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842356.1;locus_tag=AD08_RS31760;product=hypothetical protein;protein_id=WP_001227531.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq pseudogene 110110 110690 . - . ID=gene-AD08_RS29335;Name=AD08_RS29335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS29335;pseudo=true NZ_JHDJ01000169.1 Protein Homology CDS 110110 110690 . - 0 ID=cds-AD08_RS29335;Parent=gene-AD08_RS29335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311742.1;locus_tag=AD08_RS29335;product=type III secretion apparatus protein OrgA/MxiK;pseudo=true;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 110706 111440 . - . ID=gene-AD08_RS07330;Name=AD08_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07330;old_locus_tag=AD08_3210 NZ_JHDJ01000169.1 Protein Homology CDS 110706 111440 . - 0 ID=cds-WP_000875246.1;Parent=gene-AD08_RS07330;Dbxref=Genbank:WP_000875246.1;Name=WP_000875246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311743.1;locus_tag=AD08_RS07330;product=EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein;protein_id=WP_000875246.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 111437 111769 . - . ID=gene-AD08_RS07325;Name=AD08_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07325;old_locus_tag=AD08_3211 NZ_JHDJ01000169.1 Protein Homology CDS 111437 111769 . - 0 ID=cds-WP_000116719.1;Parent=gene-AD08_RS07325;Dbxref=Genbank:WP_000116719.1;Name=WP_000116719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311744.1;locus_tag=AD08_RS07325;product=type III secretion system inner rod subunit SctI;protein_id=WP_000116719.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 111789 112028 . - . ID=gene-AD08_RS07320;Name=AD08_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07320;old_locus_tag=AD08_3212 NZ_JHDJ01000169.1 Protein Homology CDS 111789 112028 . - 0 ID=cds-WP_000796272.1;Parent=gene-AD08_RS07320;Dbxref=Genbank:WP_000796272.1;Name=WP_000796272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311745.1;locus_tag=AD08_RS07320;product=type III secretion system needle complex protein;protein_id=WP_000796272.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 112042 113223 . - . ID=gene-AD08_RS07315;Name=AD08_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07315;old_locus_tag=AD08_3213 NZ_JHDJ01000169.1 Protein Homology CDS 112042 113223 . - 0 ID=cds-WP_001326506.1;Parent=gene-AD08_RS07315;Dbxref=Genbank:WP_001326506.1;Name=WP_001326506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001365813.1;locus_tag=AD08_RS07315;product=PrgH/EprH family type III secretion apparatus protein;protein_id=WP_001326506.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 113480 113980 . + . ID=gene-AD08_RS0126560;Name=AD08_RS0126560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126560 NZ_JHDJ01000169.1 Protein Homology CDS 113480 113980 . + 0 ID=cds-WP_001195875.1;Parent=gene-AD08_RS0126560;Dbxref=Genbank:WP_001195875.1;Name=WP_001195875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311747.1;locus_tag=AD08_RS0126560;product=LuxR family transcriptional regulator;protein_id=WP_001195875.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 113982 114275 . + . ID=gene-AD08_RS0126565;Name=AD08_RS0126565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126565 NZ_JHDJ01000169.1 Protein Homology CDS 113982 114275 . + 0 ID=cds-WP_000060555.1;Parent=gene-AD08_RS0126565;Dbxref=Genbank:WP_000060555.1;Name=WP_000060555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060689.1;locus_tag=AD08_RS0126565;product=invasion protein;protein_id=WP_000060555.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 114337 114729 . - . ID=gene-AD08_RS07310;Name=AD08_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07310;old_locus_tag=AD08_3214 NZ_JHDJ01000169.1 Protein Homology CDS 114337 114729 . - 0 ID=cds-WP_000834139.1;Parent=gene-AD08_RS07310;Dbxref=Genbank:WP_000834139.1;Name=WP_000834139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020218801.1;locus_tag=AD08_RS07310;product=hypothetical protein;protein_id=WP_000834139.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 114726 115457 . - . ID=gene-AD08_RS07305;Name=AD08_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07305;old_locus_tag=AD08_3215 NZ_JHDJ01000169.1 Protein Homology CDS 114726 115457 . - 0 ID=cds-WP_001284697.1;Parent=gene-AD08_RS07305;Dbxref=Genbank:WP_001284697.1;Name=WP_001284697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284706.1;locus_tag=AD08_RS07305;product=hypothetical protein;protein_id=WP_001284697.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 115466 116233 . - . ID=gene-AD08_RS07300;Name=AD08_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07300;old_locus_tag=AD08_3216 NZ_JHDJ01000169.1 Protein Homology CDS 115466 116233 . - 0 ID=cds-WP_000503280.1;Parent=gene-AD08_RS07300;Dbxref=Genbank:WP_000503280.1;Name=WP_000503280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503299.1;locus_tag=AD08_RS07300;product=type III secretion system export apparatus protein SctT;protein_id=WP_000503280.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 116235 116495 . - . ID=gene-AD08_RS07295;Name=AD08_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07295;old_locus_tag=AD08_3217 NZ_JHDJ01000169.1 Protein Homology CDS 116235 116495 . - 0 ID=cds-WP_000341004.1;Parent=gene-AD08_RS07295;Dbxref=Genbank:WP_000341004.1;Name=WP_000341004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311751.1;locus_tag=AD08_RS07295;product=EscS/YscS/HrcS family type III secretion system export apparatus protein;protein_id=WP_000341004.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq pseudogene 116505 117169 . - . ID=gene-AD08_RS07290;Name=AD08_RS07290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS07290;old_locus_tag=AD08_3218;pseudo=true NZ_JHDJ01000169.1 Protein Homology CDS 116505 117169 . - 0 ID=cds-AD08_RS07290;Parent=gene-AD08_RS07290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311752.1;locus_tag=AD08_RS07290;product=EscR/YscR/HrcR family type III secretion system export apparatus protein;pseudo=true;transl_table=11 NZ_JHDJ01000169.1 RefSeq gene 117159 118013 . - . ID=gene-AD08_RS27525;Name=AD08_RS27525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS27525 NZ_JHDJ01000169.1 Protein Homology CDS 117159 118013 . - 0 ID=cds-WP_001381386.1;Parent=gene-AD08_RS27525;Dbxref=Genbank:WP_001381386.1;Name=WP_001381386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001381386.1;locus_tag=AD08_RS27525;product=YscQ/HrcQ family type III secretion apparatus protein;protein_id=WP_001381386.1;transl_table=11 NZ_JHDJ01000169.1 RefSeq pseudogene 118044 118508 . - . ID=gene-AD08_RS31315;Name=AD08_RS31315;end_range=118508,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31315;old_locus_tag=AD08_3220;partial=true;pseudo=true NZ_JHDJ01000169.1 Protein Homology CDS 118044 118508 . - 0 ID=cds-AD08_RS31315;Parent=gene-AD08_RS31315;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=118508,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS31315;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000170.1 1 24425 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000170.1 RefSeq region 1 24425 . + . ID=NZ_JHDJ01000170.1:1..24425;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000170.1 RefSeq pseudogene 1 457 . - . ID=gene-AD08_RS30695;Name=AD08_RS30695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30695;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000170.1 Protein Homology CDS 1 457 . - 0 ID=cds-AD08_RS30695;Parent=gene-AD08_RS30695;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS30695;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000170.1 RefSeq pseudogene 500 639 . - . ID=gene-AD08_RS31765;Name=AD08_RS31765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31765;old_locus_tag=AD08_3222;partial=true;pseudo=true;start_range=.,500 NZ_JHDJ01000170.1 Protein Homology CDS 500 639 . - 0 ID=cds-AD08_RS31765;Parent=gene-AD08_RS31765;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311753.1;locus_tag=AD08_RS31765;partial=true;product=YscQ/HrcQ family type III secretion apparatus protein;pseudo=true;start_range=.,500;transl_table=11 NZ_JHDJ01000170.1 RefSeq pseudogene 731 2341 . - . ID=gene-AD08_RS31770;Name=AD08_RS31770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31770;pseudo=true NZ_JHDJ01000170.1 Protein Homology CDS 731 2341 . - 0 ID=cds-AD08_RS31770;Parent=gene-AD08_RS31770;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001613747.1;locus_tag=AD08_RS31770;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDJ01000170.1 RefSeq gene 2497 2570 . - . ID=gene-AD08_RS07260;Name=AD08_RS07260;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS07260;old_locus_tag=AD08_3225 NZ_JHDJ01000170.1 tRNAscan-SE tRNA 2497 2570 . - . ID=rna-AD08_RS07260;Parent=gene-AD08_RS07260;anticodon=(pos:complement(2536..2538));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS07260;product=tRNA-Gly NZ_JHDJ01000170.1 tRNAscan-SE exon 2497 2570 . - . ID=exon-AD08_RS07260-1;Parent=rna-AD08_RS07260;anticodon=(pos:complement(2536..2538));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS07260;product=tRNA-Gly NZ_JHDJ01000170.1 RefSeq gene 2649 3404 . - . ID=gene-AD08_RS07255;Name=AD08_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07255;old_locus_tag=AD08_3226 NZ_JHDJ01000170.1 Protein Homology CDS 2649 3404 . - 0 ID=cds-WP_001301085.1;Parent=gene-AD08_RS07255;Dbxref=Genbank:WP_001301085.1;Name=WP_001301085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417341.4;locus_tag=AD08_RS07255;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_001301085.1;transl_table=11 NZ_JHDJ01000170.1 RefSeq gene 3819 6116 . + . ID=gene-AD08_RS07250;Name=xdhA;gbkey=Gene;gene=xdhA;gene_biotype=protein_coding;locus_tag=AD08_RS07250;old_locus_tag=AD08_3227 NZ_JHDJ01000170.1 Protein Homology CDS 3819 6116 . + 0 ID=cds-WP_032219193.1;Parent=gene-AD08_RS07250;Dbxref=Genbank:WP_032219193.1;Name=WP_032219193.1;gbkey=CDS;gene=xdhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708647.1;locus_tag=AD08_RS07250;product=xanthine dehydrogenase molybdenum-binding subunit XdhA;protein_id=WP_032219193.1;transl_table=11 NZ_JHDJ01000170.1 RefSeq gene 6127 7005 . + . ID=gene-AD08_RS07245;Name=xdhB;gbkey=Gene;gene=xdhB;gene_biotype=protein_coding;locus_tag=AD08_RS07245;old_locus_tag=AD08_3228 NZ_JHDJ01000170.1 Protein Homology CDS 6127 7005 . + 0 ID=cds-WP_000459182.1;Parent=gene-AD08_RS07245;Dbxref=Genbank:WP_000459182.1;Name=WP_000459182.1;gbkey=CDS;gene=xdhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417343.1;locus_tag=AD08_RS07245;product=xanthine dehydrogenase FAD-binding subunit XdhB;protein_id=WP_000459182.1;transl_table=11 NZ_JHDJ01000170.1 RefSeq gene 7002 7481 . + . ID=gene-AD08_RS07240;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=AD08_RS07240;old_locus_tag=AD08_3229 NZ_JHDJ01000170.1 Protein Homology CDS 7002 7481 . + 0 ID=cds-WP_001394732.1;Parent=gene-AD08_RS07240;Dbxref=Genbank:WP_001394732.1;Name=WP_001394732.1;gbkey=CDS;gene=xdhC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417344.1;locus_tag=AD08_RS07240;product=xanthine dehydrogenase iron sulfur-binding subunit XdhC;protein_id=WP_001394732.1;transl_table=11 NZ_JHDJ01000170.1 RefSeq gene 7521 9299 . - . ID=gene-AD08_RS07235;Name=AD08_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07235;old_locus_tag=AD08_3230 NZ_JHDJ01000170.1 Protein Homology CDS 7521 9299 . - 0 ID=cds-WP_000417791.1;Parent=gene-AD08_RS07235;Dbxref=Genbank:WP_000417791.1;Name=WP_000417791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417345.1;locus_tag=AD08_RS07235;product=sigma-54-dependent transcriptional regulator;protein_id=WP_000417791.1;transl_table=11 NZ_JHDJ01000170.1 RefSeq gene 9778 10965 . + . ID=gene-AD08_RS07230;Name=ygeW;gbkey=Gene;gene=ygeW;gene_biotype=protein_coding;locus_tag=AD08_RS07230;old_locus_tag=AD08_3231 NZ_JHDJ01000170.1 Protein Homology CDS 9778 10965 . + 0 ID=cds-WP_000859787.1;Parent=gene-AD08_RS07230;Dbxref=Genbank:WP_000859787.1;Name=WP_000859787.1;gbkey=CDS;gene=ygeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311770.2;locus_tag=AD08_RS07230;product=knotted carbamoyltransferase YgeW;protein_id=WP_000859787.1;transl_table=11 NZ_JHDJ01000170.1 RefSeq gene 11023 12219 . + . ID=gene-AD08_RS07225;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=AD08_RS07225;old_locus_tag=AD08_3232 NZ_JHDJ01000170.1 Protein Homology CDS 11023 12219 . + 0 ID=cds-WP_000110493.1;Parent=gene-AD08_RS07225;Dbxref=Genbank:WP_000110493.1;Name=WP_000110493.1;gbkey=CDS;gene=dpaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311771.1;locus_tag=AD08_RS07225;product=diaminopropionate ammonia-lyase;protein_id=WP_000110493.1;transl_table=11 NZ_JHDJ01000170.1 RefSeq gene 12277 13488 . + . ID=gene-AD08_RS07220;Name=AD08_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07220;old_locus_tag=AD08_3233 NZ_JHDJ01000170.1 Protein Homology CDS 12277 13488 . + 0 ID=cds-WP_001107125.1;Parent=gene-AD08_RS07220;Dbxref=Genbank:WP_001107125.1;Name=WP_001107125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311772.1;locus_tag=AD08_RS07220;product=YgeY family selenium metabolism-linked hydrolase;protein_id=WP_001107125.1;transl_table=11 NZ_JHDJ01000170.1 RefSeq gene 13541 14926 . + . ID=gene-AD08_RS07215;Name=AD08_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07215;old_locus_tag=AD08_3234 NZ_JHDJ01000170.1 Protein Homology CDS 13541 14926 . + 0 ID=cds-WP_001264452.1;Parent=gene-AD08_RS07215;Dbxref=Genbank:WP_001264452.1;Name=WP_001264452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311773.2;locus_tag=AD08_RS07215;product=dihydropyrimidinase;protein_id=WP_001264452.1;transl_table=11 NZ_JHDJ01000170.1 RefSeq gene 14974 15906 . + . ID=gene-AD08_RS07210;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=AD08_RS07210;old_locus_tag=AD08_3235 NZ_JHDJ01000170.1 Protein Homology CDS 14974 15906 . + 0 ID=cds-WP_000037992.1;Parent=gene-AD08_RS07210;Dbxref=Genbank:WP_000037992.1;Name=WP_000037992.1;gbkey=CDS;gene=arcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417350.1;locus_tag=AD08_RS07210;product=carbamate kinase;protein_id=WP_000037992.1;transl_table=11 NZ_JHDJ01000170.1 RefSeq gene 16127 17752 . - . ID=gene-AD08_RS07205;Name=AD08_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07205;old_locus_tag=AD08_3236 NZ_JHDJ01000170.1 Protein Homology CDS 16127 17752 . - 0 ID=cds-WP_001020381.1;Parent=gene-AD08_RS07205;Dbxref=Genbank:WP_001020381.1;Name=WP_001020381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417351.1;locus_tag=AD08_RS07205;product=EF2563 family selenium-dependent molybdenum hydroxylase system protein;protein_id=WP_001020381.1;transl_table=11 NZ_JHDJ01000170.1 RefSeq pseudogene 17800 18570 . - . ID=gene-AD08_RS07200;Name=yqeC;gbkey=Gene;gene=yqeC;gene_biotype=pseudogene;locus_tag=AD08_RS07200;old_locus_tag=AD08_3237;pseudo=true NZ_JHDJ01000170.1 Protein Homology CDS 17800 18570 . - 0 ID=cds-AD08_RS07200;Parent=gene-AD08_RS07200;Note=internal stop;gbkey=CDS;gene=yqeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417352.2;locus_tag=AD08_RS07200;product=putative selenium-dependent hydroxylase accessory protein YqeC;pseudo=true;transl_table=11 NZ_JHDJ01000170.1 RefSeq gene 18673 19251 . + . ID=gene-AD08_RS07195;Name=mocA;gbkey=Gene;gene=mocA;gene_biotype=protein_coding;locus_tag=AD08_RS07195;old_locus_tag=AD08_3238 NZ_JHDJ01000170.1 Protein Homology CDS 18673 19251 . + 0 ID=cds-WP_032219195.1;Parent=gene-AD08_RS07195;Dbxref=Genbank:WP_032219195.1;Name=WP_032219195.1;gbkey=CDS;gene=mocA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417353.1;locus_tag=AD08_RS07195;product=molybdenum cofactor cytidylyltransferase;protein_id=WP_032219195.1;transl_table=11 NZ_JHDJ01000170.1 RefSeq gene 19573 22671 . + . ID=gene-AD08_RS07190;Name=ygfK;gbkey=Gene;gene=ygfK;gene_biotype=protein_coding;locus_tag=AD08_RS07190;old_locus_tag=AD08_3239 NZ_JHDJ01000170.1 Protein Homology CDS 19573 22671 . + 0 ID=cds-WP_032176572.1;Parent=gene-AD08_RS07190;Dbxref=Genbank:WP_032176572.1;Name=WP_032176572.1;gbkey=CDS;gene=ygfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417354.1;locus_tag=AD08_RS07190;product=putative selenate reductase subunit YgfK;protein_id=WP_032176572.1;transl_table=11 NZ_JHDJ01000170.1 RefSeq gene 22674 24002 . + . ID=gene-AD08_RS07185;Name=ssnA;gbkey=Gene;gene=ssnA;gene_biotype=protein_coding;locus_tag=AD08_RS07185;old_locus_tag=AD08_3240 NZ_JHDJ01000170.1 Protein Homology CDS 22674 24002 . + 0 ID=cds-WP_000906252.1;Parent=gene-AD08_RS07185;Dbxref=Genbank:WP_000906252.1;Name=WP_000906252.1;gbkey=CDS;gene=ssnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417355.4;locus_tag=AD08_RS07185;product=putative aminohydrolase SsnA;protein_id=WP_000906252.1;transl_table=11 NZ_JHDJ01000170.1 RefSeq pseudogene 24008 24088 . - . ID=gene-AD08_RS31775;Name=AD08_RS31775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31775;partial=true;pseudo=true;start_range=.,24008 NZ_JHDJ01000170.1 Protein Homology CDS 24008 24088 . - 0 ID=cds-AD08_RS31775;Parent=gene-AD08_RS31775;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310823.2;locus_tag=AD08_RS31775;partial=true;product=PapI protein;pseudo=true;start_range=.,24008;transl_table=11 NZ_JHDJ01000170.1 RefSeq gene 24054 24425 . - . ID=gene-AD08_RS07180;Name=AD08_RS07180;end_range=24425,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07180;old_locus_tag=AD08_3241;partial=true NZ_JHDJ01000170.1 Protein Homology CDS 24054 24425 . - 0 ID=cds-WP_050436525.1;Parent=gene-AD08_RS07180;Dbxref=Genbank:WP_050436525.1;Name=WP_050436525.1;end_range=24425,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS07180;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_050436525.1;transl_table=11 ##sequence-region NZ_JHDJ01000171.1 1 91421 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000171.1 RefSeq region 1 91421 . + . ID=NZ_JHDJ01000171.1:1..91421;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000171.1 RefSeq pseudogene 1 393 . - . ID=gene-AD08_RS07175;Name=AD08_RS07175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS07175;old_locus_tag=AD08_3242;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000171.1 Protein Homology CDS 1 393 . - 0 ID=cds-AD08_RS07175;Parent=gene-AD08_RS07175;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS07175;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000171.1 cmsearch sequence_feature 1 112 . - . ID=id-AD08_RS07175;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS07175;partial=true;start_range=.,1 NZ_JHDJ01000171.1 RefSeq gene 492 1271 . + . ID=gene-AD08_RS07170;Name=AD08_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07170;old_locus_tag=AD08_3243 NZ_JHDJ01000171.1 Protein Homology CDS 492 1271 . + 0 ID=cds-WP_000572462.1;Parent=gene-AD08_RS07170;Dbxref=Genbank:WP_000572462.1;Name=WP_000572462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311780.1;locus_tag=AD08_RS07170;product=molybdopterin-dependent oxidoreductase FAD-binding subunit;protein_id=WP_000572462.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq pseudogene 1278 4133 . + . ID=gene-AD08_RS07165;Name=AD08_RS07165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS07165;old_locus_tag=AD08_3244;partial=true;pseudo=true;start_range=.,1278 NZ_JHDJ01000171.1 Protein Homology CDS 1278 4133 . + 0 ID=cds-AD08_RS07165;Parent=gene-AD08_RS07165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417357.1;locus_tag=AD08_RS07165;partial=true;product=molybdopterin-dependent oxidoreductase Mo/Fe-S-binding subunit;pseudo=true;start_range=.,1278;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 4298 5698 . + . ID=gene-AD08_RS07160;Name=xanQ;gbkey=Gene;gene=xanQ;gene_biotype=protein_coding;locus_tag=AD08_RS07160;old_locus_tag=AD08_3245 NZ_JHDJ01000171.1 Protein Homology CDS 4298 5698 . + 0 ID=cds-WP_032219199.1;Parent=gene-AD08_RS07160;Dbxref=Genbank:WP_032219199.1;Name=WP_032219199.1;gbkey=CDS;gene=xanQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417358.2;locus_tag=AD08_RS07160;product=xanthine/proton symporter XanQ;protein_id=WP_032219199.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq pseudogene 5716 7032 . + . ID=gene-AD08_RS0126570;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=pseudogene;locus_tag=AD08_RS0126570;pseudo=true NZ_JHDJ01000171.1 Protein Homology CDS 5716 7032 . + 0 ID=cds-AD08_RS0126570;Parent=gene-AD08_RS0126570;Note=internal stop;gbkey=CDS;gene=guaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311783.2;locus_tag=AD08_RS0126570;product=guanine deaminase;pseudo=true;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 7068 8435 . + . ID=gene-AD08_RS07155;Name=AD08_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07155;old_locus_tag=AD08_3248 NZ_JHDJ01000171.1 Protein Homology CDS 7068 8435 . + 0 ID=cds-WP_000012163.1;Parent=gene-AD08_RS07155;Dbxref=Genbank:WP_000012163.1;Name=WP_000012163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311784.1;locus_tag=AD08_RS07155;product=guanine/hypoxanthine transporter GhxQ;protein_id=WP_000012163.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 8471 8959 . - . ID=gene-AD08_RS07150;Name=AD08_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07150;old_locus_tag=AD08_3249 NZ_JHDJ01000171.1 Protein Homology CDS 8471 8959 . - 0 ID=cds-WP_000838428.1;Parent=gene-AD08_RS07150;Dbxref=Genbank:WP_000838428.1;Name=WP_000838428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417362.4;locus_tag=AD08_RS07150;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_000838428.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 8959 10878 . - . ID=gene-AD08_RS07145;Name=ygfT;gbkey=Gene;gene=ygfT;gene_biotype=protein_coding;locus_tag=AD08_RS07145;old_locus_tag=AD08_3250 NZ_JHDJ01000171.1 Protein Homology CDS 8959 10878 . - 0 ID=cds-WP_001350545.1;Parent=gene-AD08_RS07145;Dbxref=Genbank:WP_001350545.1;Name=WP_001350545.1;gbkey=CDS;gene=ygfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417363.2;locus_tag=AD08_RS07145;product=formate-dependent uric acid utilization protein YgfT;protein_id=WP_001350545.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 11314 12762 . + . ID=gene-AD08_RS07140;Name=AD08_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07140;old_locus_tag=AD08_3251 NZ_JHDJ01000171.1 Protein Homology CDS 11314 12762 . + 0 ID=cds-WP_024168196.1;Parent=gene-AD08_RS07140;Dbxref=Genbank:WP_024168196.1;Name=WP_024168196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417364.2;locus_tag=AD08_RS07140;product=urate/proton symporter UacT;protein_id=WP_024168196.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 12764 12889 . + . ID=gene-AD08_RS07135;Name=AD08_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07135;old_locus_tag=AD08_3252 NZ_JHDJ01000171.1 Protein Homology CDS 12764 12889 . + 0 ID=cds-WP_001010156.1;Parent=gene-AD08_RS07135;Dbxref=Genbank:WP_001010156.1;Name=WP_001010156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791254.1;locus_tag=AD08_RS07135;product=hypothetical protein;protein_id=WP_001010156.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 12886 12957 . - . ID=gene-AD08_RS31780;Name=AD08_RS31780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31780 NZ_JHDJ01000171.1 Protein Homology CDS 12886 12957 . - 0 ID=cds-WP_120795390.1;Parent=gene-AD08_RS31780;Dbxref=Genbank:WP_120795390.1;Name=WP_120795390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518812.1;locus_tag=AD08_RS31780;product=protein YqfH;protein_id=WP_120795390.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 13012 13560 . + . ID=gene-AD08_RS07130;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=AD08_RS07130;old_locus_tag=AD08_3253 NZ_JHDJ01000171.1 Protein Homology CDS 13012 13560 . + 0 ID=cds-WP_001192820.1;Parent=gene-AD08_RS07130;Dbxref=Genbank:WP_001192820.1;Name=WP_001192820.1;gbkey=CDS;gene=idi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417365.1;locus_tag=AD08_RS07130;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_001192820.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 13604 15121 . - . ID=gene-AD08_RS07125;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AD08_RS07125;old_locus_tag=AD08_3254 NZ_JHDJ01000171.1 Protein Homology CDS 13604 15121 . - 0 ID=cds-WP_000003071.1;Parent=gene-AD08_RS07125;Dbxref=Genbank:WP_000003071.1;Name=WP_000003071.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=AD08_RS07125;product=lysine--tRNA ligase;protein_id=WP_000003071.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 15131 16229 . - . ID=gene-AD08_RS07120;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=AD08_RS07120;old_locus_tag=AD08_3255 NZ_JHDJ01000171.1 Protein Homology CDS 16155 16229 . - 0 ID=cds-WP_001701073.1;Parent=gene-AD08_RS07120;Dbxref=Genbank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AD08_RS07120;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11 NZ_JHDJ01000171.1 Protein Homology CDS 15131 16153 . - 0 ID=cds-WP_001701073.1;Parent=gene-AD08_RS07120;Dbxref=Genbank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AD08_RS07120;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 16320 18053 . - . ID=gene-AD08_RS07115;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=AD08_RS07115;old_locus_tag=AD08_3257 NZ_JHDJ01000171.1 Protein Homology CDS 16320 18053 . - 0 ID=cds-WP_032219204.1;Parent=gene-AD08_RS07115;Dbxref=Genbank:WP_032219204.1;Name=WP_032219204.1;gbkey=CDS;gene=recJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417368.1;locus_tag=AD08_RS07115;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_032219204.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 18059 18769 . - . ID=gene-AD08_RS07110;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=AD08_RS07110;old_locus_tag=AD08_3258 NZ_JHDJ01000171.1 Protein Homology CDS 18059 18769 . - 0 ID=cds-WP_000715214.1;Parent=gene-AD08_RS07110;Dbxref=Genbank:WP_000715214.1;Name=WP_000715214.1;gbkey=CDS;gene=dsbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311792.1;locus_tag=AD08_RS07110;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000715214.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 18794 19690 . - . ID=gene-AD08_RS07105;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=AD08_RS07105;old_locus_tag=AD08_3259 NZ_JHDJ01000171.1 Protein Homology CDS 18794 19690 . - 0 ID=cds-WP_000806638.1;Parent=gene-AD08_RS07105;Dbxref=Genbank:WP_000806638.1;Name=WP_000806638.1;gbkey=CDS;gene=xerD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417370.1;locus_tag=AD08_RS07105;product=site-specific tyrosine recombinase XerD;protein_id=WP_000806638.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 19802 20323 . + . ID=gene-AD08_RS07100;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=AD08_RS07100;old_locus_tag=AD08_3260 NZ_JHDJ01000171.1 Protein Homology CDS 19802 20323 . + 0 ID=cds-WP_001055874.1;Parent=gene-AD08_RS07100;Dbxref=Genbank:WP_001055874.1;Name=WP_001055874.1;gbkey=CDS;gene=fldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311794.1;locus_tag=AD08_RS07100;product=flavodoxin FldB;protein_id=WP_001055874.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 20363 20770 . - . ID=gene-AD08_RS07095;Name=AD08_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07095;old_locus_tag=AD08_3261 NZ_JHDJ01000171.1 Protein Homology CDS 20363 20770 . - 0 ID=cds-WP_000244777.1;Parent=gene-AD08_RS07095;Dbxref=Genbank:WP_000244777.1;Name=WP_000244777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417372.1;locus_tag=AD08_RS07095;product=toxin CptA;protein_id=WP_000244777.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 20751 21017 . - . ID=gene-AD08_RS07090;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=AD08_RS07090;old_locus_tag=AD08_3262 NZ_JHDJ01000171.1 Protein Homology CDS 20751 21017 . - 0 ID=cds-WP_032219207.1;Parent=gene-AD08_RS07090;Dbxref=Genbank:WP_032219207.1;Name=WP_032219207.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=AD08_RS07090;product=FAD assembly factor SdhE;protein_id=WP_032219207.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 21260 22240 . + . ID=gene-AD08_RS07085;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=AD08_RS07085;old_locus_tag=AD08_3264 NZ_JHDJ01000171.1 Protein Homology CDS 21260 22240 . + 0 ID=cds-WP_000886062.1;Parent=gene-AD08_RS07085;Dbxref=Genbank:WP_000886062.1;Name=WP_000886062.1;gbkey=CDS;gene=ygfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417374.1;locus_tag=AD08_RS07085;product=tRNA-modifying protein YgfZ;protein_id=WP_000886062.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 22436 23095 . - . ID=gene-AD08_RS07080;Name=AD08_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07080;old_locus_tag=AD08_3265 NZ_JHDJ01000171.1 Protein Homology CDS 22436 23095 . - 0 ID=cds-WP_000250274.1;Parent=gene-AD08_RS07080;Dbxref=Genbank:WP_000250274.1;Name=WP_000250274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311798.1;locus_tag=AD08_RS07080;product=hemolysin III family protein;protein_id=WP_000250274.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 23259 23570 . - . ID=gene-AD08_RS07075;Name=AD08_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07075;old_locus_tag=AD08_3266 NZ_JHDJ01000171.1 Protein Homology CDS 23259 23570 . - 0 ID=cds-WP_001182957.1;Parent=gene-AD08_RS07075;Dbxref=Genbank:WP_001182957.1;Name=WP_001182957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311799.1;locus_tag=AD08_RS07075;product=ASCH domain-containing protein;protein_id=WP_001182957.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 23615 25048 . + . ID=gene-AD08_RS07070;Name=AD08_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07070;old_locus_tag=AD08_3267 NZ_JHDJ01000171.1 Protein Homology CDS 23615 25048 . + 0 ID=cds-WP_001336277.1;Parent=gene-AD08_RS07070;Dbxref=Genbank:WP_001336277.1;Name=WP_001336277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708664.2;locus_tag=AD08_RS07070;product=6-phospho-beta-glucosidase BglA;protein_id=WP_001336277.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 25105 25848 . - . ID=gene-AD08_RS07065;Name=AD08_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07065;old_locus_tag=AD08_3268 NZ_JHDJ01000171.1 Protein Homology CDS 25105 25848 . - 0 ID=cds-WP_000951964.1;Parent=gene-AD08_RS07065;Dbxref=Genbank:WP_000951964.1;Name=WP_000951964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417378.1;locus_tag=AD08_RS07065;product=SDR family oxidoreductase;protein_id=WP_000951964.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 26115 28988 . - . ID=gene-AD08_RS07060;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=AD08_RS07060;old_locus_tag=AD08_3269 NZ_JHDJ01000171.1 Protein Homology CDS 26115 28988 . - 0 ID=cds-WP_000195062.1;Parent=gene-AD08_RS07060;Dbxref=Genbank:WP_000195062.1;Name=WP_000195062.1;gbkey=CDS;gene=gcvP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417379.1;locus_tag=AD08_RS07060;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_000195062.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 29107 29496 . - . ID=gene-AD08_RS07055;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=AD08_RS07055;old_locus_tag=AD08_3270 NZ_JHDJ01000171.1 Protein Homology CDS 29107 29496 . - 0 ID=cds-WP_001295377.1;Parent=gene-AD08_RS07055;Dbxref=Genbank:WP_001295377.1;Name=WP_001295377.1;gbkey=CDS;gene=gcvH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=AD08_RS07055;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 29520 30614 . - . ID=gene-AD08_RS07050;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=AD08_RS07050;old_locus_tag=AD08_3271 NZ_JHDJ01000171.1 Protein Homology CDS 29520 30614 . - 0 ID=cds-WP_000068701.1;Parent=gene-AD08_RS07050;Dbxref=Genbank:WP_000068701.1;Name=WP_000068701.1;gbkey=CDS;gene=gcvT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417381.1;locus_tag=AD08_RS07050;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068701.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 30905 30988 . + . ID=gene-AD08_RS31785;Name=AD08_RS31785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31785;old_locus_tag=AD08_3272 NZ_JHDJ01000171.1 Protein Homology CDS 30905 30988 . + 0 ID=cds-WP_120795391.1;Parent=gene-AD08_RS31785;Dbxref=Genbank:WP_120795391.1;Name=WP_120795391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518813.1;locus_tag=AD08_RS31785;product=protein YqfI;protein_id=WP_120795391.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 31062 32264 . - . ID=gene-AD08_RS07045;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=AD08_RS07045;old_locus_tag=AD08_3273 NZ_JHDJ01000171.1 Protein Homology CDS 31062 32264 . - 0 ID=cds-WP_001642155.1;Parent=gene-AD08_RS07045;Dbxref=Genbank:WP_001642155.1;Name=WP_001642155.1;gbkey=CDS;gene=ubiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417382.1;locus_tag=AD08_RS07045;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001642155.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 32287 33465 . - . ID=gene-AD08_RS07040;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=AD08_RS07040;old_locus_tag=AD08_3274 NZ_JHDJ01000171.1 Protein Homology CDS 32287 33465 . - 0 ID=cds-WP_000111195.1;Parent=gene-AD08_RS07040;Dbxref=Genbank:WP_000111195.1;Name=WP_000111195.1;gbkey=CDS;gene=ubiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417383.1;locus_tag=AD08_RS07040;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_000111195.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 33462 34787 . - . ID=gene-AD08_RS07035;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=AD08_RS07035;old_locus_tag=AD08_3275 NZ_JHDJ01000171.1 Protein Homology CDS 33462 34787 . - 0 ID=cds-WP_001290136.1;Parent=gene-AD08_RS07035;Dbxref=Genbank:WP_001290136.1;Name=WP_001290136.1;gbkey=CDS;gene=pepP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417384.1;locus_tag=AD08_RS07035;product=Xaa-Pro aminopeptidase;protein_id=WP_001290136.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 34813 35391 . - . ID=gene-AD08_RS07030;Name=ygfB;gbkey=Gene;gene=ygfB;gene_biotype=protein_coding;locus_tag=AD08_RS07030;old_locus_tag=AD08_3276 NZ_JHDJ01000171.1 Protein Homology CDS 34813 35391 . - 0 ID=cds-WP_001295378.1;Parent=gene-AD08_RS07030;Dbxref=Genbank:WP_001295378.1;Name=WP_001295378.1;gbkey=CDS;gene=ygfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=AD08_RS07030;product=UPF0149 family protein YgfB;protein_id=WP_001295378.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 35559 35888 . + . ID=gene-AD08_RS07025;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=AD08_RS07025;old_locus_tag=AD08_3277 NZ_JHDJ01000171.1 Protein Homology CDS 35559 35888 . + 0 ID=cds-WP_001276008.1;Parent=gene-AD08_RS07025;Dbxref=Genbank:WP_001276008.1;Name=WP_001276008.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311808.1;locus_tag=AD08_RS07025;product=cell division protein ZapA;protein_id=WP_001276008.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 35930 36113 . + . ID=gene-AD08_RS27530;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=AD08_RS27530 NZ_JHDJ01000171.1 cmsearch ncRNA 35930 36113 . + . ID=rna-AD08_RS27530;Parent=gene-AD08_RS27530;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27530;product=6S RNA NZ_JHDJ01000171.1 cmsearch exon 35930 36113 . + . ID=exon-AD08_RS27530-1;Parent=rna-AD08_RS27530;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27530;product=6S RNA NZ_JHDJ01000171.1 RefSeq gene 36134 36736 . + . ID=gene-AD08_RS07020;Name=AD08_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07020;old_locus_tag=AD08_3278 NZ_JHDJ01000171.1 Protein Homology CDS 36134 36736 . + 0 ID=cds-WP_000192748.1;Parent=gene-AD08_RS07020;Dbxref=Genbank:WP_000192748.1;Name=WP_000192748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=AD08_RS07020;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_000192748.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 36837 36896 . - . ID=gene-AD08_RS29370;Name=ibsC;gbkey=Gene;gene=ibsC;gene_biotype=protein_coding;locus_tag=AD08_RS29370 NZ_JHDJ01000171.1 Protein Homology CDS 36837 36896 . - 0 ID=cds-WP_010723220.1;Parent=gene-AD08_RS29370;Dbxref=Genbank:WP_010723220.1;Name=WP_010723220.1;gbkey=CDS;gene=ibsC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=AD08_RS29370;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_010723220.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 37125 38357 . - . ID=gene-AD08_RS07015;Name=AD08_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07015;old_locus_tag=AD08_3279 NZ_JHDJ01000171.1 Protein Homology CDS 37125 38357 . - 0 ID=cds-WP_001151604.1;Parent=gene-AD08_RS07015;Dbxref=Genbank:WP_001151604.1;Name=WP_001151604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311811.1;locus_tag=AD08_RS07015;product=phosphoglycerate dehydrogenase;protein_id=WP_001151604.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 38613 39272 . - . ID=gene-AD08_RS07010;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=AD08_RS07010;old_locus_tag=AD08_3280 NZ_JHDJ01000171.1 Protein Homology CDS 38613 39272 . - 0 ID=cds-WP_000189743.1;Parent=gene-AD08_RS07010;Dbxref=Genbank:WP_000189743.1;Name=WP_000189743.1;gbkey=CDS;gene=rpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311812.1;locus_tag=AD08_RS07010;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189743.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 39328 39558 . - . ID=gene-AD08_RS07005;Name=AD08_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07005;old_locus_tag=AD08_3281 NZ_JHDJ01000171.1 Protein Homology CDS 39328 39558 . - 0 ID=cds-WP_000545308.1;Parent=gene-AD08_RS07005;Dbxref=Genbank:WP_000545308.1;Name=WP_000545308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328908.1;locus_tag=AD08_RS07005;product=hypothetical protein;protein_id=WP_000545308.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 39700 40593 . + . ID=gene-AD08_RS07000;Name=AD08_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS07000;old_locus_tag=AD08_3282 NZ_JHDJ01000171.1 Protein Homology CDS 39700 40593 . + 0 ID=cds-WP_000828351.1;Parent=gene-AD08_RS07000;Dbxref=Genbank:WP_000828351.1;Name=WP_000828351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311813.1;locus_tag=AD08_RS07000;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828351.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 40797 42941 . + . ID=gene-AD08_RS06995;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=AD08_RS06995;old_locus_tag=AD08_3283 NZ_JHDJ01000171.1 Protein Homology CDS 40797 42941 . + 0 ID=cds-WP_000073223.1;Parent=gene-AD08_RS06995;Dbxref=Genbank:WP_000073223.1;Name=WP_000073223.1;gbkey=CDS;gene=scpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417392.1;locus_tag=AD08_RS06995;product=methylmalonyl-CoA mutase;protein_id=WP_000073223.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 42934 43929 . + . ID=gene-AD08_RS06990;Name=meaB;gbkey=Gene;gene=meaB;gene_biotype=protein_coding;locus_tag=AD08_RS06990;old_locus_tag=AD08_3284 NZ_JHDJ01000171.1 Protein Homology CDS 42934 43929 . + 0 ID=cds-WP_000606525.1;Parent=gene-AD08_RS06990;Dbxref=Genbank:WP_000606525.1;Name=WP_000606525.1;gbkey=CDS;gene=meaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417393.1;locus_tag=AD08_RS06990;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=WP_000606525.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 43940 44725 . + . ID=gene-AD08_RS06985;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=AD08_RS06985;old_locus_tag=AD08_3285 NZ_JHDJ01000171.1 Protein Homology CDS 43940 44725 . + 0 ID=cds-WP_000122080.1;Parent=gene-AD08_RS06985;Dbxref=Genbank:WP_000122080.1;Name=WP_000122080.1;gbkey=CDS;gene=scpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311816.2;locus_tag=AD08_RS06985;product=methylmalonyl-CoA decarboxylase;protein_id=WP_000122080.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq pseudogene 44749 46227 . + . ID=gene-AD08_RS0126580;Name=scpC;gbkey=Gene;gene=scpC;gene_biotype=pseudogene;locus_tag=AD08_RS0126580;pseudo=true NZ_JHDJ01000171.1 Protein Homology CDS 44749 46227 . + 0 ID=cds-AD08_RS0126580;Parent=gene-AD08_RS0126580;Note=internal stop;gbkey=CDS;gene=scpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417395.1;locus_tag=AD08_RS0126580;product=propionyl-CoA:succinate CoA transferase;pseudo=true;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 46224 47120 . - . ID=gene-AD08_RS06980;Name=AD08_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06980;old_locus_tag=AD08_3288 NZ_JHDJ01000171.1 Protein Homology CDS 46224 47120 . - 0 ID=cds-WP_000350807.1;Parent=gene-AD08_RS06980;Dbxref=Genbank:WP_000350807.1;Name=WP_000350807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417396.4;locus_tag=AD08_RS06980;product=LysR family transcriptional regulator;protein_id=WP_000350807.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 47287 48027 . - . ID=gene-AD08_RS06975;Name=AD08_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06975;old_locus_tag=AD08_3289 NZ_JHDJ01000171.1 Protein Homology CDS 47287 48027 . - 0 ID=cds-WP_000669834.1;Parent=gene-AD08_RS06975;Dbxref=Genbank:WP_000669834.1;Name=WP_000669834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311820.1;locus_tag=AD08_RS06975;product=oxidative stress defense protein;protein_id=WP_000669834.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 48120 48755 . - . ID=gene-AD08_RS06970;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=AD08_RS06970;old_locus_tag=AD08_3290 NZ_JHDJ01000171.1 Protein Homology CDS 48120 48755 . - 0 ID=cds-WP_032219210.1;Parent=gene-AD08_RS06970;Dbxref=Genbank:WP_032219210.1;Name=WP_032219210.1;gbkey=CDS;gene=argO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417398.1;locus_tag=AD08_RS06970;product=arginine exporter ArgO;protein_id=WP_032219210.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 48894 49754 . - . ID=gene-AD08_RS06965;Name=AD08_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06965;old_locus_tag=AD08_3291 NZ_JHDJ01000171.1 Protein Homology CDS 48894 49754 . - 0 ID=cds-WP_000389818.1;Parent=gene-AD08_RS06965;Dbxref=Genbank:WP_000389818.1;Name=WP_000389818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311822.1;locus_tag=AD08_RS06965;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389818.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 50112 51191 . - . ID=gene-AD08_RS06960;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=AD08_RS06960;old_locus_tag=AD08_3292 NZ_JHDJ01000171.1 Protein Homology CDS 50112 51191 . - 0 ID=cds-WP_000034372.1;Parent=gene-AD08_RS06960;Dbxref=Genbank:WP_000034372.1;Name=WP_000034372.1;gbkey=CDS;gene=fbaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=AD08_RS06960;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034372.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 51406 52569 . - . ID=gene-AD08_RS06955;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=AD08_RS06955;old_locus_tag=AD08_3293 NZ_JHDJ01000171.1 Protein Homology CDS 51406 52569 . - 0 ID=cds-WP_000111269.1;Parent=gene-AD08_RS06955;Dbxref=Genbank:WP_000111269.1;Name=WP_000111269.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=AD08_RS06955;product=phosphoglycerate kinase;protein_id=WP_000111269.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 52619 53638 . - . ID=gene-AD08_RS06950;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=AD08_RS06950;old_locus_tag=AD08_3294 NZ_JHDJ01000171.1 Protein Homology CDS 52619 53638 . - 0 ID=cds-WP_000218480.1;Parent=gene-AD08_RS06950;Dbxref=Genbank:WP_000218480.1;Name=WP_000218480.1;gbkey=CDS;gene=epd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311825.1;locus_tag=AD08_RS06950;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218480.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 53923 54636 . - . ID=gene-AD08_RS06945;Name=AD08_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06945;old_locus_tag=AD08_3295 NZ_JHDJ01000171.1 Protein Homology CDS 53923 54636 . - 0 ID=cds-WP_000687705.1;Parent=gene-AD08_RS06945;Dbxref=Genbank:WP_000687705.1;Name=WP_000687705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417403.1;locus_tag=AD08_RS06945;product=nucleoside/nucleotide kinase family protein;protein_id=WP_000687705.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 54633 55142 . - . ID=gene-AD08_RS06940;Name=fumE;gbkey=Gene;gene=fumE;gene_biotype=protein_coding;locus_tag=AD08_RS06940;old_locus_tag=AD08_3296 NZ_JHDJ01000171.1 Protein Homology CDS 54633 55142 . - 0 ID=cds-WP_000224147.1;Parent=gene-AD08_RS06940;Dbxref=Genbank:WP_000224147.1;Name=WP_000224147.1;gbkey=CDS;gene=fumE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417404.1;locus_tag=AD08_RS06940;product=fumarase E;protein_id=WP_000224147.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 55164 56129 . - . ID=gene-AD08_RS06935;Name=yggF;gbkey=Gene;gene=yggF;gene_biotype=protein_coding;locus_tag=AD08_RS06935;old_locus_tag=AD08_3297 NZ_JHDJ01000171.1 Protein Homology CDS 55164 56129 . - 0 ID=cds-WP_000987283.1;Parent=gene-AD08_RS06935;Dbxref=Genbank:WP_000987283.1;Name=WP_000987283.1;gbkey=CDS;gene=yggF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417405.1;locus_tag=AD08_RS06935;product=class II fructose-bisphosphatase;protein_id=WP_000987283.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 56126 57403 . - . ID=gene-AD08_RS06930;Name=AD08_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06930;old_locus_tag=AD08_3298 NZ_JHDJ01000171.1 Protein Homology CDS 56126 57403 . - 0 ID=cds-WP_000853247.1;Parent=gene-AD08_RS06930;Dbxref=Genbank:WP_000853247.1;Name=WP_000853247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026187.1;locus_tag=AD08_RS06930;product=zinc-binding dehydrogenase;protein_id=WP_000853247.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 57418 58806 . - . ID=gene-AD08_RS06925;Name=AD08_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06925;old_locus_tag=AD08_3299 NZ_JHDJ01000171.1 Protein Homology CDS 57418 58806 . - 0 ID=cds-WP_000428805.1;Parent=gene-AD08_RS06925;Dbxref=Genbank:WP_000428805.1;Name=WP_000428805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311835.1;locus_tag=AD08_RS06925;product=PTS mannitol transporter subunit IICB;protein_id=WP_000428805.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 58834 59277 . - . ID=gene-AD08_RS06920;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=AD08_RS06920;old_locus_tag=AD08_3300 NZ_JHDJ01000171.1 Protein Homology CDS 58834 59277 . - 0 ID=cds-WP_032219213.1;Parent=gene-AD08_RS06920;Dbxref=Genbank:WP_032219213.1;Name=WP_032219213.1;gbkey=CDS;gene=cmtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311836.1;locus_tag=AD08_RS06920;product=PTS mannitol transporter subunit IIA;protein_id=WP_032219213.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 59591 61582 . - . ID=gene-AD08_RS06915;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AD08_RS06915;old_locus_tag=AD08_3301 NZ_JHDJ01000171.1 Protein Homology CDS 59591 61582 . - 0 ID=cds-WP_000098614.1;Parent=gene-AD08_RS06915;Dbxref=Genbank:WP_000098614.1;Name=WP_000098614.1;gbkey=CDS;gene=tkt;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026188.1;locus_tag=AD08_RS06915;product=transketolase;protein_id=WP_000098614.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 61860 62618 . + . ID=gene-AD08_RS06910;Name=AD08_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06910;old_locus_tag=AD08_3302 NZ_JHDJ01000171.1 Protein Homology CDS 61860 62618 . + 0 ID=cds-WP_001326497.1;Parent=gene-AD08_RS06910;Dbxref=Genbank:WP_001326497.1;Name=WP_001326497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417411.2;locus_tag=AD08_RS06910;product=metalloprotease LoiP;protein_id=WP_001326497.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 62824 63744 . - . ID=gene-AD08_RS06905;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=AD08_RS06905;old_locus_tag=AD08_3303 NZ_JHDJ01000171.1 Protein Homology CDS 62824 63744 . - 0 ID=cds-WP_001526241.1;Parent=gene-AD08_RS06905;Dbxref=Genbank:WP_001526241.1;Name=WP_001526241.1;gbkey=CDS;gene=speB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311839.1;locus_tag=AD08_RS06905;product=agmatinase;protein_id=WP_001526241.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 63882 65858 . - . ID=gene-AD08_RS06900;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=AD08_RS06900;old_locus_tag=AD08_3304 NZ_JHDJ01000171.1 Protein Homology CDS 63882 65858 . - 0 ID=cds-WP_001300904.1;Parent=gene-AD08_RS06900;Dbxref=Genbank:WP_001300904.1;Name=WP_001300904.1;gbkey=CDS;gene=speA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417413.1;locus_tag=AD08_RS06900;product=biosynthetic arginine decarboxylase;protein_id=WP_001300904.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 65867 65998 . - . ID=gene-AD08_RS06895;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=AD08_RS06895;old_locus_tag=AD08_3305 NZ_JHDJ01000171.1 Protein Homology CDS 65867 65998 . - 0 ID=cds-WP_001297406.1;Parent=gene-AD08_RS06895;Dbxref=Genbank:WP_001297406.1;Name=WP_001297406.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417414.2;locus_tag=AD08_RS06895;product=acid stress response protein YqgB;protein_id=WP_001297406.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 66134 66457 . + . ID=gene-AD08_RS30710;Name=AD08_RS30710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30710 NZ_JHDJ01000171.1 Protein Homology CDS 66134 66457 . + 0 ID=cds-WP_162752717.1;Parent=gene-AD08_RS30710;Dbxref=Genbank:WP_162752717.1;Name=WP_162752717.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037550.1;locus_tag=AD08_RS30710;product=hypothetical protein;protein_id=WP_162752717.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 66652 67806 . + . ID=gene-AD08_RS06890;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=AD08_RS06890;old_locus_tag=AD08_3307 NZ_JHDJ01000171.1 Protein Homology CDS 66652 67806 . + 0 ID=cds-WP_001062128.1;Parent=gene-AD08_RS06890;Dbxref=Genbank:WP_001062128.1;Name=WP_001062128.1;gbkey=CDS;gene=metK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=AD08_RS06890;product=methionine adenosyltransferase;protein_id=WP_001062128.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 68230 69624 . + . ID=gene-AD08_RS06885;Name=AD08_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06885;old_locus_tag=AD08_3308 NZ_JHDJ01000171.1 Protein Homology CDS 68230 69624 . + 0 ID=cds-WP_001112301.1;Parent=gene-AD08_RS06885;Dbxref=Genbank:WP_001112301.1;Name=WP_001112301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417418.1;locus_tag=AD08_RS06885;product=galactose/proton symporter;protein_id=WP_001112301.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 69701 70198 . + . ID=gene-AD08_RS06880;Name=AD08_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06880;old_locus_tag=AD08_3309 NZ_JHDJ01000171.1 Protein Homology CDS 69701 70198 . + 0 ID=cds-WP_001300769.1;Parent=gene-AD08_RS06880;Dbxref=Genbank:WP_001300769.1;Name=WP_001300769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417419.1;locus_tag=AD08_RS06880;product=SprT family zinc-dependent metalloprotease;protein_id=WP_001300769.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 70293 71000 . + . ID=gene-AD08_RS06875;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=AD08_RS06875;old_locus_tag=AD08_3310 NZ_JHDJ01000171.1 Protein Homology CDS 70293 71000 . + 0 ID=cds-WP_000286500.1;Parent=gene-AD08_RS06875;Dbxref=Genbank:WP_000286500.1;Name=WP_000286500.1;gbkey=CDS;gene=endA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417420.1;locus_tag=AD08_RS06875;product=deoxyribonuclease I;protein_id=WP_000286500.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 71080 71811 . + . ID=gene-AD08_RS06870;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=AD08_RS06870;old_locus_tag=AD08_3311 NZ_JHDJ01000171.1 Protein Homology CDS 71080 71811 . + 0 ID=cds-WP_001222509.1;Parent=gene-AD08_RS06870;Dbxref=Genbank:WP_001222509.1;Name=WP_001222509.1;gbkey=CDS;gene=rsmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=AD08_RS06870;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001222509.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 71824 72774 . + . ID=gene-AD08_RS06865;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=AD08_RS06865;old_locus_tag=AD08_3312 NZ_JHDJ01000171.1 Protein Homology CDS 71824 72774 . + 0 ID=cds-WP_000593273.1;Parent=gene-AD08_RS06865;Dbxref=Genbank:WP_000593273.1;Name=WP_000593273.1;gbkey=CDS;gene=gshB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417422.1;locus_tag=AD08_RS06865;product=glutathione synthase;protein_id=WP_000593273.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 72811 73446 . + . ID=gene-AD08_RS06860;Name=AD08_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06860;old_locus_tag=AD08_3313 NZ_JHDJ01000171.1 Protein Homology CDS 72811 73446 . + 0 ID=cds-WP_162752718.1;Parent=gene-AD08_RS06860;Dbxref=Genbank:WP_162752718.1;Name=WP_162752718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708713.3;locus_tag=AD08_RS06860;product=YqgE/AlgH family protein;protein_id=WP_162752718.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 73446 73862 . + . ID=gene-AD08_RS06855;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=AD08_RS06855;old_locus_tag=AD08_3314 NZ_JHDJ01000171.1 Protein Homology CDS 73446 73862 . + 0 ID=cds-WP_000017106.1;Parent=gene-AD08_RS06855;Dbxref=Genbank:WP_000017106.1;Name=WP_000017106.1;gbkey=CDS;gene=ruvX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417424.1;locus_tag=AD08_RS06855;product=Holliday junction resolvase RuvX;protein_id=WP_000017106.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 74046 75026 . - . ID=gene-AD08_RS06850;Name=AD08_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06850;old_locus_tag=AD08_3316 NZ_JHDJ01000171.1 Protein Homology CDS 74046 75026 . - 0 ID=cds-WP_001326494.1;Parent=gene-AD08_RS06850;Dbxref=Genbank:WP_001326494.1;Name=WP_001326494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417425.2;locus_tag=AD08_RS06850;product=type IV pilus twitching motility protein PilT;protein_id=WP_001326494.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 75044 75748 . + . ID=gene-AD08_RS06845;Name=yggS;gbkey=Gene;gene=yggS;gene_biotype=protein_coding;locus_tag=AD08_RS06845;old_locus_tag=AD08_3317 NZ_JHDJ01000171.1 Protein Homology CDS 75044 75748 . + 0 ID=cds-WP_000997795.1;Parent=gene-AD08_RS06845;Dbxref=Genbank:WP_000997795.1;Name=WP_000997795.1;gbkey=CDS;gene=yggS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417426.1;locus_tag=AD08_RS06845;product=pyridoxal phosphate homeostasis protein;protein_id=WP_000997795.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 75766 76332 . + . ID=gene-AD08_RS06840;Name=yggT;gbkey=Gene;gene=yggT;gene_biotype=protein_coding;locus_tag=AD08_RS06840;old_locus_tag=AD08_3318 NZ_JHDJ01000171.1 Protein Homology CDS 75766 76332 . + 0 ID=cds-WP_001094831.1;Parent=gene-AD08_RS06840;Dbxref=Genbank:WP_001094831.1;Name=WP_001094831.1;gbkey=CDS;gene=yggT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311855.1;locus_tag=AD08_RS06840;product=osmotic shock tolerance protein YggT;protein_id=WP_001094831.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 76329 76619 . + . ID=gene-AD08_RS06835;Name=AD08_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06835;old_locus_tag=AD08_3319 NZ_JHDJ01000171.1 Protein Homology CDS 76329 76619 . + 0 ID=cds-WP_000994920.1;Parent=gene-AD08_RS06835;Dbxref=Genbank:WP_000994920.1;Name=WP_000994920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417428.2;locus_tag=AD08_RS06835;product=YggU family protein;protein_id=WP_000994920.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 76627 77220 . + . ID=gene-AD08_RS06830;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=AD08_RS06830;old_locus_tag=AD08_3320 NZ_JHDJ01000171.1 Protein Homology CDS 76627 77220 . + 0 ID=cds-WP_001174777.1;Parent=gene-AD08_RS06830;Dbxref=Genbank:WP_001174777.1;Name=WP_001174777.1;gbkey=CDS;gene=rdgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417429.1;locus_tag=AD08_RS06830;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_001174777.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 77213 78349 . + . ID=gene-AD08_RS06825;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=AD08_RS06825;old_locus_tag=AD08_3321 NZ_JHDJ01000171.1 Protein Homology CDS 77213 78349 . + 0 ID=cds-WP_000239943.1;Parent=gene-AD08_RS06825;Dbxref=Genbank:WP_000239943.1;Name=WP_000239943.1;gbkey=CDS;gene=hemW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417430.1;locus_tag=AD08_RS06825;product=radical SAM family heme chaperone HemW;protein_id=WP_000239943.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 78504 79511 . - . ID=gene-AD08_RS06820;Name=AD08_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06820;old_locus_tag=AD08_3322 NZ_JHDJ01000171.1 Protein Homology CDS 78504 79511 . - 0 ID=cds-WP_000745210.1;Parent=gene-AD08_RS06820;Dbxref=Genbank:WP_000745210.1;Name=WP_000745210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417431.1;locus_tag=AD08_RS06820;product=DUF1202 family protein;protein_id=WP_000745210.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 79628 80674 . - . ID=gene-AD08_RS06815;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=AD08_RS06815;old_locus_tag=AD08_3323 NZ_JHDJ01000171.1 Protein Homology CDS 79628 80674 . - 0 ID=cds-WP_000394131.1;Parent=gene-AD08_RS06815;Dbxref=Genbank:WP_000394131.1;Name=WP_000394131.1;gbkey=CDS;gene=ansB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417432.1;locus_tag=AD08_RS06815;product=L-asparaginase 2;protein_id=WP_000394131.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 80850 81569 . - . ID=gene-AD08_RS06810;Name=AD08_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06810;old_locus_tag=AD08_3324 NZ_JHDJ01000171.1 Protein Homology CDS 80850 81569 . - 0 ID=cds-WP_000984796.1;Parent=gene-AD08_RS06810;Dbxref=Genbank:WP_000984796.1;Name=WP_000984796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311861.1;locus_tag=AD08_RS06810;product=DUF2884 domain-containing protein;protein_id=WP_000984796.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 81753 82079 . - . ID=gene-AD08_RS06800;Name=AD08_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06800;old_locus_tag=AD08_3326 NZ_JHDJ01000171.1 Protein Homology CDS 81753 82079 . - 0 ID=cds-WP_001107564.1;Parent=gene-AD08_RS06800;Dbxref=Genbank:WP_001107564.1;Name=WP_001107564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417434.4;locus_tag=AD08_RS06800;product=YggL family protein;protein_id=WP_001107564.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 82079 82798 . - . ID=gene-AD08_RS06795;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=AD08_RS06795;old_locus_tag=AD08_3327 NZ_JHDJ01000171.1 Protein Homology CDS 82079 82798 . - 0 ID=cds-WP_000786911.1;Parent=gene-AD08_RS06795;Dbxref=Genbank:WP_000786911.1;Name=WP_000786911.1;gbkey=CDS;gene=trmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417435.1;locus_tag=AD08_RS06795;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786911.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 82959 84011 . + . ID=gene-AD08_RS06790;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=AD08_RS06790;old_locus_tag=AD08_3328 NZ_JHDJ01000171.1 Protein Homology CDS 82959 84011 . + 0 ID=cds-WP_001321419.1;Parent=gene-AD08_RS06790;Dbxref=Genbank:WP_001321419.1;Name=WP_001321419.1;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417436.1;locus_tag=AD08_RS06790;product=A/G-specific adenine glycosylase;protein_id=WP_001321419.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 84039 84314 . + . ID=gene-AD08_RS06785;Name=AD08_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06785;old_locus_tag=AD08_3329 NZ_JHDJ01000171.1 Protein Homology CDS 84039 84314 . + 0 ID=cds-WP_000091700.1;Parent=gene-AD08_RS06785;Dbxref=Genbank:WP_000091700.1;Name=WP_000091700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311865.1;locus_tag=AD08_RS06785;product=oxidative damage protection protein;protein_id=WP_000091700.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 84379 85458 . + . ID=gene-AD08_RS06780;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=AD08_RS06780;old_locus_tag=AD08_3330 NZ_JHDJ01000171.1 Protein Homology CDS 84379 85458 . + 0 ID=cds-WP_032219218.1;Parent=gene-AD08_RS06780;Dbxref=Genbank:WP_032219218.1;Name=WP_032219218.1;gbkey=CDS;gene=mltC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417438.2;locus_tag=AD08_RS06780;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_032219218.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 85660 86916 . + . ID=gene-AD08_RS06775;Name=AD08_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06775;old_locus_tag=AD08_3332 NZ_JHDJ01000171.1 Protein Homology CDS 85660 86916 . + 0 ID=cds-WP_001049791.1;Parent=gene-AD08_RS06775;Dbxref=Genbank:WP_001049791.1;Name=WP_001049791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311867.2;locus_tag=AD08_RS06775;product=nucleoside permease NupG;protein_id=WP_001049791.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 86966 89101 . - . ID=gene-AD08_RS06770;Name=AD08_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06770;old_locus_tag=AD08_3333 NZ_JHDJ01000171.1 Protein Homology CDS 86966 89101 . - 0 ID=cds-WP_001326492.1;Parent=gene-AD08_RS06770;Dbxref=Genbank:WP_001326492.1;Name=WP_001326492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417440.4;locus_tag=AD08_RS06770;product=ornithine decarboxylase;protein_id=WP_001326492.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 89499 90206 . + . ID=gene-AD08_RS06765;Name=AD08_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06765;old_locus_tag=AD08_3334 NZ_JHDJ01000171.1 Protein Homology CDS 89499 90206 . + 0 ID=cds-WP_000234514.1;Parent=gene-AD08_RS06765;Dbxref=Genbank:WP_000234514.1;Name=WP_000234514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417441.1;locus_tag=AD08_RS06765;product=DUF554 domain-containing protein;protein_id=WP_000234514.1;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 90312 90387 . + . ID=gene-AD08_RS06760;Name=AD08_RS06760;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS06760;old_locus_tag=AD08_3335 NZ_JHDJ01000171.1 tRNAscan-SE tRNA 90312 90387 . + . ID=rna-AD08_RS06760;Parent=gene-AD08_RS06760;anticodon=(pos:90345..90347);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS06760;product=tRNA-Phe NZ_JHDJ01000171.1 tRNAscan-SE exon 90312 90387 . + . ID=exon-AD08_RS06760-1;Parent=rna-AD08_RS06760;anticodon=(pos:90345..90347);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS06760;product=tRNA-Phe NZ_JHDJ01000171.1 RefSeq pseudogene 90585 90971 . + . ID=gene-AD08_RS0126595;Name=AD08_RS0126595;end_range=90971,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0126595;partial=true;pseudo=true NZ_JHDJ01000171.1 Protein Homology CDS 90585 90971 . + 0 ID=cds-AD08_RS0126595;Parent=gene-AD08_RS0126595;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=90971,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311870.1;locus_tag=AD08_RS0126595;partial=true;product=DUF4102 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDJ01000171.1 RefSeq gene 91013 91421 . - . ID=gene-AD08_RS06755;Name=AD08_RS06755;end_range=91421,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06755;old_locus_tag=AD08_3336;partial=true NZ_JHDJ01000171.1 Protein Homology CDS 91013 91421 . - 1 ID=cds-WP_032219221.1;Parent=gene-AD08_RS06755;Dbxref=Genbank:WP_032219221.1;Name=WP_032219221.1;end_range=91421,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS06755;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_032219221.1;transl_table=11 ##sequence-region NZ_JHDJ01000172.1 1 1291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000172.1 RefSeq region 1 1291 . + . ID=NZ_JHDJ01000172.1:1..1291;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000172.1 RefSeq pseudogene 1 434 . + . ID=gene-AD08_RS06750;Name=AD08_RS06750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS06750;old_locus_tag=AD08_3337;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000172.1 Protein Homology CDS 1 434 . + 2 ID=cds-AD08_RS06750;Parent=gene-AD08_RS06750;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS06750;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000172.1 RefSeq pseudogene 451 771 . + . ID=gene-AD08_RS06745;Name=AD08_RS06745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS06745;old_locus_tag=AD08_3338;partial=true;pseudo=true;start_range=.,451 NZ_JHDJ01000172.1 Protein Homology CDS 451 771 . + 0 ID=cds-AD08_RS06745;Parent=gene-AD08_RS06745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308619.2;locus_tag=AD08_RS06745;partial=true;product=fimbrial protein;pseudo=true;start_range=.,451;transl_table=11 NZ_JHDJ01000172.1 RefSeq pseudogene 917 1291 . + . ID=gene-AD08_RS0126605;Name=AD08_RS0126605;end_range=1291,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0126605;partial=true;pseudo=true NZ_JHDJ01000172.1 Protein Homology CDS 917 1291 . + 0 ID=cds-AD08_RS0126605;Parent=gene-AD08_RS0126605;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=1291,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS0126605;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000173.1 1 12173 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000173.1 RefSeq region 1 12173 . + . ID=NZ_JHDJ01000173.1:1..12173;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000173.1 RefSeq pseudogene 1 383 . - . ID=gene-AD08_RS06740;Name=AD08_RS06740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS06740;old_locus_tag=AD08_3340;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000173.1 Protein Homology CDS 1 383 . - 0 ID=cds-AD08_RS06740;Parent=gene-AD08_RS06740;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS06740;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000173.1 cmsearch sequence_feature 1 102 . - . ID=id-AD08_RS06740;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS06740;partial=true;start_range=.,1 NZ_JHDJ01000173.1 RefSeq pseudogene 440 1095 . + . ID=gene-AD08_RS0126610;Name=AD08_RS0126610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0126610;partial=true;pseudo=true;start_range=.,440 NZ_JHDJ01000173.1 Protein Homology CDS 440 1095 . + 0 ID=cds-AD08_RS0126610;Parent=gene-AD08_RS0126610;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611482.1;locus_tag=AD08_RS0126610;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,440;transl_table=11 NZ_JHDJ01000173.1 RefSeq gene 1178 1435 . + . ID=gene-AD08_RS31790;Name=AD08_RS31790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31790 NZ_JHDJ01000173.1 Protein Homology CDS 1178 1435 . + 0 ID=cds-WP_000177060.1;Parent=gene-AD08_RS31790;Dbxref=Genbank:WP_000177060.1;Name=WP_000177060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000177060.1;locus_tag=AD08_RS31790;product=hypothetical protein;protein_id=WP_000177060.1;transl_table=11 NZ_JHDJ01000173.1 RefSeq gene 1993 2760 . - . ID=gene-AD08_RS0126620;Name=fecE;gbkey=Gene;gene=fecE;gene_biotype=protein_coding;locus_tag=AD08_RS0126620 NZ_JHDJ01000173.1 Protein Homology CDS 1993 2760 . - 0 ID=cds-WP_001385328.1;Parent=gene-AD08_RS0126620;Dbxref=Genbank:WP_001385328.1;Name=WP_001385328.1;gbkey=CDS;gene=fecE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418707.1;locus_tag=AD08_RS0126620;product=Fe(3+) dicitrate ABC transporter ATP-binding protein FecE;protein_id=WP_001385328.1;transl_table=11 NZ_JHDJ01000173.1 RefSeq gene 2761 3717 . - . ID=gene-AD08_RS06735;Name=fecD;gbkey=Gene;gene=fecD;gene_biotype=protein_coding;locus_tag=AD08_RS06735;old_locus_tag=AD08_3345 NZ_JHDJ01000173.1 Protein Homology CDS 2761 3717 . - 0 ID=cds-WP_001621115.1;Parent=gene-AD08_RS06735;Dbxref=Genbank:WP_001621115.1;Name=WP_001621115.1;gbkey=CDS;gene=fecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418708.1;locus_tag=AD08_RS06735;product=Fe(3+) dicitrate ABC transporter permease subunit FecD;protein_id=WP_001621115.1;transl_table=11 NZ_JHDJ01000173.1 RefSeq gene 3714 4712 . - . ID=gene-AD08_RS06730;Name=fecC;gbkey=Gene;gene=fecC;gene_biotype=protein_coding;locus_tag=AD08_RS06730;old_locus_tag=AD08_3346 NZ_JHDJ01000173.1 Protein Homology CDS 3714 4712 . - 0 ID=cds-WP_001534010.1;Parent=gene-AD08_RS06730;Dbxref=Genbank:WP_001534010.1;Name=WP_001534010.1;gbkey=CDS;gene=fecC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418709.1;locus_tag=AD08_RS06730;product=iron-dicitrate ABC transporter permease FecC;protein_id=WP_001534010.1;transl_table=11 NZ_JHDJ01000173.1 RefSeq gene 4709 5611 . - . ID=gene-AD08_RS06725;Name=fecB;gbkey=Gene;gene=fecB;gene_biotype=protein_coding;locus_tag=AD08_RS06725;old_locus_tag=AD08_3347 NZ_JHDJ01000173.1 Protein Homology CDS 4709 5611 . - 0 ID=cds-WP_000879152.1;Parent=gene-AD08_RS06725;Dbxref=Genbank:WP_000879152.1;Name=WP_000879152.1;gbkey=CDS;gene=fecB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418710.4;locus_tag=AD08_RS06725;product=Fe(3+) dicitrate ABC transporter substrate-binding protein FecB;protein_id=WP_000879152.1;transl_table=11 NZ_JHDJ01000173.1 RefSeq gene 5656 7980 . - . ID=gene-AD08_RS06720;Name=fecA;gbkey=Gene;gene=fecA;gene_biotype=protein_coding;locus_tag=AD08_RS06720;old_locus_tag=AD08_3348 NZ_JHDJ01000173.1 Protein Homology CDS 5656 7980 . - 0 ID=cds-WP_000188286.1;Parent=gene-AD08_RS06720;Dbxref=Genbank:WP_000188286.1;Name=WP_000188286.1;gbkey=CDS;gene=fecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418711.1;locus_tag=AD08_RS06720;product=Fe(3+) dicitrate transport protein FecA;protein_id=WP_000188286.1;transl_table=11 NZ_JHDJ01000173.1 RefSeq gene 8067 9020 . - . ID=gene-AD08_RS06715;Name=fecR;gbkey=Gene;gene=fecR;gene_biotype=protein_coding;locus_tag=AD08_RS06715;old_locus_tag=AD08_3349 NZ_JHDJ01000173.1 Protein Homology CDS 8067 9020 . - 0 ID=cds-WP_001068910.1;Parent=gene-AD08_RS06715;Dbxref=Genbank:WP_001068910.1;Name=WP_001068910.1;gbkey=CDS;gene=fecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418712.1;locus_tag=AD08_RS06715;product=fec operon regulator FecR;protein_id=WP_001068910.1;transl_table=11 NZ_JHDJ01000173.1 RefSeq gene 9017 9538 . - . ID=gene-AD08_RS06710;Name=AD08_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06710;old_locus_tag=AD08_3350 NZ_JHDJ01000173.1 Protein Homology CDS 9017 9538 . - 0 ID=cds-WP_001283626.1;Parent=gene-AD08_RS06710;Dbxref=Genbank:WP_001283626.1;Name=WP_001283626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418713.1;locus_tag=AD08_RS06710;product=RNA polymerase sigma factor FecI;protein_id=WP_001283626.1;transl_table=11 NZ_JHDJ01000173.1 RefSeq pseudogene 9830 10530 . + . ID=gene-AD08_RS30725;Name=AD08_RS30725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30725;pseudo=true NZ_JHDJ01000173.1 Protein Homology CDS 9830 10530 . + 0 ID=cds-AD08_RS30725;Parent=gene-AD08_RS30725;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS30725;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_JHDJ01000173.1 RefSeq pseudogene 10550 10615 . - . ID=gene-AD08_RS31325;Name=AD08_RS31325;end_range=10615,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31325;partial=true;pseudo=true;start_range=.,10550 NZ_JHDJ01000173.1 Protein Homology CDS 10550 10615 . - 0 ID=cds-AD08_RS31325;Parent=gene-AD08_RS31325;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=10615,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280980.1;locus_tag=AD08_RS31325;partial=true;product=omptin family outer membrane protease;pseudo=true;start_range=.,10550;transl_table=11 NZ_JHDJ01000173.1 RefSeq pseudogene 10848 10952 . + . ID=gene-AD08_RS29440;Name=AD08_RS29440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS29440;partial=true;pseudo=true;start_range=.,10848 NZ_JHDJ01000173.1 Protein Homology CDS 10848 10952 . + 0 ID=cds-AD08_RS29440;Parent=gene-AD08_RS29440;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD08_RS29440;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,10848;transl_table=11 NZ_JHDJ01000173.1 RefSeq gene 11292 11549 . + . ID=gene-AD08_RS06700;Name=AD08_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06700;old_locus_tag=AD08_3354 NZ_JHDJ01000173.1 Protein Homology CDS 11292 11549 . + 0 ID=cds-WP_000555341.1;Parent=gene-AD08_RS06700;Dbxref=Genbank:WP_000555341.1;Name=WP_000555341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230781.1;locus_tag=AD08_RS06700;product=hypothetical protein;protein_id=WP_000555341.1;transl_table=11 NZ_JHDJ01000173.1 RefSeq gene 11859 12173 . - . ID=gene-AD08_RS06695;Name=AD08_RS06695;end_range=12173,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06695;old_locus_tag=AD08_3355;partial=true NZ_JHDJ01000173.1 Protein Homology CDS 11859 12173 . - 0 ID=cds-WP_001487784.1;Parent=gene-AD08_RS06695;Dbxref=Genbank:WP_001487784.1;Name=WP_001487784.1;end_range=12173,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS06695;partial=true;product=transposase;protein_id=WP_001487784.1;transl_table=11 ##sequence-region NZ_JHDJ01000174.1 1 292148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000174.1 RefSeq region 1 292148 . + . ID=NZ_JHDJ01000174.1:1..292148;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000174.1 RefSeq pseudogene 1 595 . + . ID=gene-AD08_RS0126640;Name=AD08_RS0126640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0126640;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000174.1 Protein Homology CDS 1 595 . + 2 ID=cds-AD08_RS0126640;Parent=gene-AD08_RS0126640;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS0126640;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000174.1 RefSeq pseudogene 611 817 . - . ID=gene-AD08_RS29455;Name=AD08_RS29455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS29455;partial=true;pseudo=true;start_range=.,611 NZ_JHDJ01000174.1 Protein Homology CDS 611 817 . - 0 ID=cds-AD08_RS29455;Parent=gene-AD08_RS29455;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417459.1;locus_tag=AD08_RS29455;partial=true;product=hypothetical protein;pseudo=true;start_range=.,611;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 991 1683 . + . ID=gene-AD08_RS06690;Name=AD08_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06690;old_locus_tag=AD08_3357 NZ_JHDJ01000174.1 Protein Homology CDS 991 1683 . + 0 ID=cds-WP_001384144.1;Parent=gene-AD08_RS06690;Dbxref=Genbank:WP_001384144.1;Name=WP_001384144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417460.1;locus_tag=AD08_RS06690;product=thymidylate kinase;protein_id=WP_001384144.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 1732 3231 . - . ID=gene-AD08_RS06685;Name=pitB;gbkey=Gene;gene=pitB;gene_biotype=protein_coding;locus_tag=AD08_RS06685;old_locus_tag=AD08_3358 NZ_JHDJ01000174.1 Protein Homology CDS 1732 3231 . - 0 ID=cds-WP_000933250.1;Parent=gene-AD08_RS06685;Dbxref=Genbank:WP_000933250.1;Name=WP_000933250.1;gbkey=CDS;gene=pitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417461.1;locus_tag=AD08_RS06685;product=inorganic phosphate transporter PitB;protein_id=WP_000933250.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 3523 5382 . - . ID=gene-AD08_RS06680;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=AD08_RS06680;old_locus_tag=AD08_3360 NZ_JHDJ01000174.1 Protein Homology CDS 3523 5382 . - 0 ID=cds-WP_001297309.1;Parent=gene-AD08_RS06680;Dbxref=Genbank:WP_001297309.1;Name=WP_001297309.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417462.1;locus_tag=AD08_RS06680;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_001297309.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 5587 6453 . + . ID=gene-AD08_RS06675;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=AD08_RS06675;old_locus_tag=AD08_3361 NZ_JHDJ01000174.1 Protein Homology CDS 5587 6453 . + 0 ID=cds-WP_001295515.1;Parent=gene-AD08_RS06675;Dbxref=Genbank:WP_001295515.1;Name=WP_001295515.1;gbkey=CDS;gene=yghU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311901.2;locus_tag=AD08_RS06675;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_001295515.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 6576 6824 . - . ID=gene-AD08_RS06670;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=AD08_RS06670;old_locus_tag=AD08_3362 NZ_JHDJ01000174.1 Protein Homology CDS 6576 6824 . - 0 ID=cds-WP_001531329.1;Parent=gene-AD08_RS06670;Dbxref=Genbank:WP_001531329.1;Name=WP_001531329.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311902.1;locus_tag=AD08_RS06670;product=hydrogenase maturation factor HybG;protein_id=WP_001531329.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 6837 7178 . - . ID=gene-AD08_RS06665;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AD08_RS06665;old_locus_tag=AD08_3363 NZ_JHDJ01000174.1 Protein Homology CDS 6837 7178 . - 0 ID=cds-WP_000544953.1;Parent=gene-AD08_RS06665;Dbxref=Genbank:WP_000544953.1;Name=WP_000544953.1;gbkey=CDS;gene=hypA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417465.1;locus_tag=AD08_RS06665;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544953.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 7171 7659 . - . ID=gene-AD08_RS06660;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=AD08_RS06660;old_locus_tag=AD08_3364 NZ_JHDJ01000174.1 Protein Homology CDS 7171 7659 . - 0 ID=cds-WP_000134014.1;Parent=gene-AD08_RS06660;Dbxref=Genbank:WP_000134014.1;Name=WP_000134014.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417466.1;locus_tag=AD08_RS06660;product=hydrogenase-2 assembly chaperone;protein_id=WP_000134014.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 7652 8146 . - . ID=gene-AD08_RS06655;Name=AD08_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06655;old_locus_tag=AD08_3365 NZ_JHDJ01000174.1 Protein Homology CDS 7652 8146 . - 0 ID=cds-WP_001221939.1;Parent=gene-AD08_RS06655;Dbxref=Genbank:WP_001221939.1;Name=WP_001221939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417467.1;locus_tag=AD08_RS06655;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221939.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 8146 9849 . - . ID=gene-AD08_RS06650;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=AD08_RS06650;old_locus_tag=AD08_3366 NZ_JHDJ01000174.1 Protein Homology CDS 8146 9849 . - 0 ID=cds-WP_032219227.1;Parent=gene-AD08_RS06650;Dbxref=Genbank:WP_032219227.1;Name=WP_032219227.1;gbkey=CDS;gene=hybC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311906.1;locus_tag=AD08_RS06650;product=hydrogenase 2 large subunit;protein_id=WP_032219227.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 9846 11024 . - . ID=gene-AD08_RS06645;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=AD08_RS06645;old_locus_tag=AD08_3367 NZ_JHDJ01000174.1 Protein Homology CDS 9846 11024 . - 0 ID=cds-WP_000017703.1;Parent=gene-AD08_RS06645;Dbxref=Genbank:WP_000017703.1;Name=WP_000017703.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417469.1;locus_tag=AD08_RS06645;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017703.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 11014 12000 . - . ID=gene-AD08_RS06640;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=AD08_RS06640;old_locus_tag=AD08_3368 NZ_JHDJ01000174.1 Protein Homology CDS 11014 12000 . - 0 ID=cds-WP_001081870.1;Parent=gene-AD08_RS06640;Dbxref=Genbank:WP_001081870.1;Name=WP_001081870.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311908.1;locus_tag=AD08_RS06640;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081870.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 12003 13121 . - . ID=gene-AD08_RS06635;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=AD08_RS06635;old_locus_tag=AD08_3369 NZ_JHDJ01000174.1 Protein Homology CDS 12003 13121 . - 0 ID=cds-WP_000145410.1;Parent=gene-AD08_RS06635;Dbxref=Genbank:WP_000145410.1;Name=WP_000145410.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311909.1;locus_tag=AD08_RS06635;product=hydrogenase 2 small subunit;protein_id=WP_000145410.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 13310 13597 . - . ID=gene-AD08_RS06630;Name=AD08_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06630;old_locus_tag=AD08_3371 NZ_JHDJ01000174.1 Protein Homology CDS 13310 13597 . - 0 ID=cds-WP_001059136.1;Parent=gene-AD08_RS06630;Dbxref=Genbank:WP_001059136.1;Name=WP_001059136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311910.1;locus_tag=AD08_RS06630;product=DUF2623 domain-containing protein;protein_id=WP_001059136.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq pseudogene 13716 14479 . - . ID=gene-AD08_RS0126650;Name=AD08_RS0126650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0126650;pseudo=true NZ_JHDJ01000174.1 Protein Homology CDS 13716 14479 . - 0 ID=cds-AD08_RS0126650;Parent=gene-AD08_RS0126650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001405915.1;locus_tag=AD08_RS0126650;product=dienelactone hydrolase family protein;pseudo=true;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 14457 14600 . - . ID=gene-AD08_RS29460;Name=AD08_RS29460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS29460;old_locus_tag=AD08_3374 NZ_JHDJ01000174.1 GeneMarkS-2+ CDS 14457 14600 . - 0 ID=cds-WP_071995843.1;Parent=gene-AD08_RS29460;Dbxref=Genbank:WP_071995843.1;Name=WP_071995843.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS29460;product=carboxymethylenebutenolidase;protein_id=WP_071995843.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 14757 15797 . + . ID=gene-AD08_RS06625;Name=gpr;gbkey=Gene;gene=gpr;gene_biotype=protein_coding;locus_tag=AD08_RS06625;old_locus_tag=AD08_3375 NZ_JHDJ01000174.1 Protein Homology CDS 14757 15797 . + 0 ID=cds-WP_032216376.1;Parent=gene-AD08_RS06625;Dbxref=Genbank:WP_032216376.1;Name=WP_032216376.1;gbkey=CDS;gene=gpr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417474.1;locus_tag=AD08_RS06625;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_032216376.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 15837 16331 . - . ID=gene-AD08_RS06620;Name=AD08_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06620;old_locus_tag=AD08_3376 NZ_JHDJ01000174.1 Protein Homology CDS 15837 16331 . - 0 ID=cds-WP_000439331.1;Parent=gene-AD08_RS06620;Dbxref=Genbank:WP_000439331.1;Name=WP_000439331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311913.1;locus_tag=AD08_RS06620;product=TIGR00645 family protein;protein_id=WP_000439331.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 16522 17406 . + . ID=gene-AD08_RS06615;Name=yghA;gbkey=Gene;gene=yghA;gene_biotype=protein_coding;locus_tag=AD08_RS06615;old_locus_tag=AD08_3377 NZ_JHDJ01000174.1 Protein Homology CDS 16522 17406 . + 0 ID=cds-WP_000018760.1;Parent=gene-AD08_RS06615;Dbxref=Genbank:WP_000018760.1;Name=WP_000018760.1;gbkey=CDS;gene=yghA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311914.1;locus_tag=AD08_RS06615;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000018760.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 17678 18103 . - . ID=gene-AD08_RS06610;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=AD08_RS06610;old_locus_tag=AD08_3378 NZ_JHDJ01000174.1 Protein Homology CDS 17678 18103 . - 0 ID=cds-WP_001240712.1;Parent=gene-AD08_RS06610;Dbxref=Genbank:WP_001240712.1;Name=WP_001240712.1;gbkey=CDS;gene=exbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311916.1;locus_tag=AD08_RS06610;product=TonB system transport protein ExbD;protein_id=WP_001240712.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 18110 18844 . - . ID=gene-AD08_RS06605;Name=AD08_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06605;old_locus_tag=AD08_3379 NZ_JHDJ01000174.1 Protein Homology CDS 18110 18844 . - 0 ID=cds-WP_000527844.1;Parent=gene-AD08_RS06605;Dbxref=Genbank:WP_000527844.1;Name=WP_000527844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311917.1;locus_tag=AD08_RS06605;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527844.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 19096 20283 . + . ID=gene-AD08_RS06600;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=AD08_RS06600;old_locus_tag=AD08_3380 NZ_JHDJ01000174.1 Protein Homology CDS 19096 20283 . + 0 ID=cds-WP_001301079.1;Parent=gene-AD08_RS06600;Dbxref=Genbank:WP_001301079.1;Name=WP_001301079.1;gbkey=CDS;gene=metC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417481.1;locus_tag=AD08_RS06600;product=cystathionine beta-lyase;protein_id=WP_001301079.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 20423 21082 . + . ID=gene-AD08_RS06595;Name=AD08_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06595;old_locus_tag=AD08_3381 NZ_JHDJ01000174.1 Protein Homology CDS 20423 21082 . + 0 ID=cds-WP_001363876.1;Parent=gene-AD08_RS06595;Dbxref=Genbank:WP_001363876.1;Name=WP_001363876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311920.1;locus_tag=AD08_RS06595;product=DedA family protein;protein_id=WP_001363876.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 21122 22021 . - . ID=gene-AD08_RS06590;Name=AD08_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06590;old_locus_tag=AD08_3382 NZ_JHDJ01000174.1 Protein Homology CDS 21122 22021 . - 0 ID=cds-WP_001298382.1;Parent=gene-AD08_RS06590;Dbxref=Genbank:WP_001298382.1;Name=WP_001298382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024513.1;locus_tag=AD08_RS06590;product=DNA-binding transcriptional regulator YqhC;protein_id=WP_001298382.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 22215 23378 . + . ID=gene-AD08_RS06585;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=AD08_RS06585;old_locus_tag=AD08_3384 NZ_JHDJ01000174.1 Protein Homology CDS 22215 23378 . + 0 ID=cds-WP_001058802.1;Parent=gene-AD08_RS06585;Dbxref=Genbank:WP_001058802.1;Name=WP_001058802.1;gbkey=CDS;gene=yqhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417484.1;locus_tag=AD08_RS06585;product=alcohol dehydrogenase;protein_id=WP_001058802.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 23483 24310 . + . ID=gene-AD08_RS06580;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=AD08_RS06580;old_locus_tag=AD08_3385 NZ_JHDJ01000174.1 Protein Homology CDS 23483 24310 . + 0 ID=cds-WP_000013149.1;Parent=gene-AD08_RS06580;Dbxref=Genbank:WP_000013149.1;Name=WP_000013149.1;gbkey=CDS;gene=dkgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417485.4;locus_tag=AD08_RS06580;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013149.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 24510 25436 . + . ID=gene-AD08_RS06575;Name=AD08_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06575;old_locus_tag=AD08_3387 NZ_JHDJ01000174.1 Protein Homology CDS 24510 25436 . + 0 ID=cds-WP_000691619.1;Parent=gene-AD08_RS06575;Dbxref=Genbank:WP_000691619.1;Name=WP_000691619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026195.1;locus_tag=AD08_RS06575;product=YbjP/YqhG family protein;protein_id=WP_000691619.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 25487 25744 . + . ID=gene-AD08_RS06570;Name=yqhH;gbkey=Gene;gene=yqhH;gene_biotype=protein_coding;locus_tag=AD08_RS06570;old_locus_tag=AD08_3388 NZ_JHDJ01000174.1 Protein Homology CDS 25487 25744 . + 0 ID=cds-WP_000848528.1;Parent=gene-AD08_RS06570;Dbxref=Genbank:WP_000848528.1;Name=WP_000848528.1;gbkey=CDS;gene=yqhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417487.1;locus_tag=AD08_RS06570;product=lipoprotein YqhH;protein_id=WP_000848528.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 25787 28006 . - . ID=gene-AD08_RS06565;Name=AD08_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06565;old_locus_tag=AD08_3389 NZ_JHDJ01000174.1 Protein Homology CDS 25787 28006 . - 0 ID=cds-WP_000095187.1;Parent=gene-AD08_RS06565;Dbxref=Genbank:WP_000095187.1;Name=WP_000095187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026196.1;locus_tag=AD08_RS06565;product=YgiQ family radical SAM protein;protein_id=WP_000095187.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 28117 29529 . - . ID=gene-AD08_RS06560;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=AD08_RS06560;old_locus_tag=AD08_3390 NZ_JHDJ01000174.1 Protein Homology CDS 28117 29529 . - 0 ID=cds-WP_000059388.1;Parent=gene-AD08_RS06560;Dbxref=Genbank:WP_000059388.1;Name=WP_000059388.1;gbkey=CDS;gene=ftsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417489.1;locus_tag=AD08_RS06560;product=cell division protein FtsP;protein_id=WP_000059388.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 29604 30341 . - . ID=gene-AD08_RS06555;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=AD08_RS06555;old_locus_tag=AD08_3391 NZ_JHDJ01000174.1 Protein Homology CDS 29604 30341 . - 0 ID=cds-WP_000965722.1;Parent=gene-AD08_RS06555;Dbxref=Genbank:WP_000965722.1;Name=WP_000965722.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417490.1;locus_tag=AD08_RS06555;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965722.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 30575 32833 . - . ID=gene-AD08_RS06550;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=AD08_RS06550;old_locus_tag=AD08_3392 NZ_JHDJ01000174.1 Protein Homology CDS 30575 32833 . - 0 ID=cds-WP_001281881.1;Parent=gene-AD08_RS06550;Dbxref=Genbank:WP_001281881.1;Name=WP_001281881.1;gbkey=CDS;gene=parC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001639862.1;locus_tag=AD08_RS06550;product=DNA topoisomerase IV subunit A;protein_id=WP_001281881.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 32971 34578 . - . ID=gene-AD08_RS06545;Name=AD08_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06545;old_locus_tag=AD08_3393 NZ_JHDJ01000174.1 Protein Homology CDS 32971 34578 . - 0 ID=cds-WP_001295629.1;Parent=gene-AD08_RS06545;Dbxref=Genbank:WP_001295629.1;Name=WP_001295629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417492.1;locus_tag=AD08_RS06545;product=ABC transporter substrate-binding protein;protein_id=WP_001295629.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 34711 35106 . - . ID=gene-AD08_RS06540;Name=mqsA;gbkey=Gene;gene=mqsA;gene_biotype=protein_coding;locus_tag=AD08_RS06540;old_locus_tag=AD08_3394 NZ_JHDJ01000174.1 Protein Homology CDS 34711 35106 . - 0 ID=cds-WP_000650107.1;Parent=gene-AD08_RS06540;Dbxref=Genbank:WP_000650107.1;Name=WP_000650107.1;gbkey=CDS;gene=mqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417493.1;locus_tag=AD08_RS06540;product=type II toxin-antitoxin system antitoxin MqsA;protein_id=WP_000650107.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 35108 35404 . - . ID=gene-AD08_RS0126665;Name=mqsR;gbkey=Gene;gene=mqsR;gene_biotype=protein_coding;locus_tag=AD08_RS0126665 NZ_JHDJ01000174.1 Protein Homology CDS 35108 35404 . - 0 ID=cds-WP_000415584.1;Parent=gene-AD08_RS0126665;Dbxref=Genbank:WP_000415584.1;Name=WP_000415584.1;gbkey=CDS;gene=mqsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417494.1;locus_tag=AD08_RS0126665;product=type II toxin-antitoxin system toxin MqsR;protein_id=WP_000415584.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 35609 36091 . - . ID=gene-AD08_RS06535;Name=AD08_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06535;old_locus_tag=AD08_3395 NZ_JHDJ01000174.1 Protein Homology CDS 35609 36091 . - 0 ID=cds-WP_000183505.1;Parent=gene-AD08_RS06535;Dbxref=Genbank:WP_000183505.1;Name=WP_000183505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026197.1;locus_tag=AD08_RS06535;product=transcriptional regulator;protein_id=WP_000183505.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 36144 36536 . - . ID=gene-AD08_RS06530;Name=ygiW;gbkey=Gene;gene=ygiW;gene_biotype=protein_coding;locus_tag=AD08_RS06530;old_locus_tag=AD08_3396 NZ_JHDJ01000174.1 Protein Homology CDS 36144 36536 . - 0 ID=cds-WP_000712658.1;Parent=gene-AD08_RS06530;Dbxref=Genbank:WP_000712658.1;Name=WP_000712658.1;gbkey=CDS;gene=ygiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311933.1;locus_tag=AD08_RS06530;product=OB fold stress tolerance protein YgiW;protein_id=WP_000712658.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 36688 37347 . + . ID=gene-AD08_RS06525;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=AD08_RS06525;old_locus_tag=AD08_3397 NZ_JHDJ01000174.1 Protein Homology CDS 36688 37347 . + 0 ID=cds-WP_001221493.1;Parent=gene-AD08_RS06525;Dbxref=Genbank:WP_001221493.1;Name=WP_001221493.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311934.1;locus_tag=AD08_RS06525;product=two-component system response regulator QseB;protein_id=WP_001221493.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 37344 38693 . + . ID=gene-AD08_RS06520;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=AD08_RS06520;old_locus_tag=AD08_3398 NZ_JHDJ01000174.1 Protein Homology CDS 37344 38693 . + 0 ID=cds-WP_032219229.1;Parent=gene-AD08_RS06520;Dbxref=Genbank:WP_032219229.1;Name=WP_032219229.1;gbkey=CDS;gene=qseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417498.1;locus_tag=AD08_RS06520;product=two-component system sensor histidine kinase QseC;protein_id=WP_032219229.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 38739 39071 . - . ID=gene-AD08_RS0126670;Name=AD08_RS0126670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126670 NZ_JHDJ01000174.1 Protein Homology CDS 38739 39071 . - 0 ID=cds-WP_000917684.1;Parent=gene-AD08_RS0126670;Dbxref=Genbank:WP_000917684.1;Name=WP_000917684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417499.1;locus_tag=AD08_RS0126670;product=DUF2645 family protein;protein_id=WP_000917684.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 39390 39971 . + . ID=gene-AD08_RS06515;Name=mdaB;gbkey=Gene;gene=mdaB;gene_biotype=protein_coding;locus_tag=AD08_RS06515;old_locus_tag=AD08_3399 NZ_JHDJ01000174.1 Protein Homology CDS 39390 39971 . + 0 ID=cds-WP_000065430.1;Parent=gene-AD08_RS06515;Dbxref=Genbank:WP_000065430.1;Name=WP_000065430.1;gbkey=CDS;gene=mdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311937.1;locus_tag=AD08_RS06515;product=NADPH:quinone oxidoreductase MdaB;protein_id=WP_000065430.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 40002 40316 . + . ID=gene-AD08_RS06510;Name=AD08_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06510;old_locus_tag=AD08_3400 NZ_JHDJ01000174.1 Protein Homology CDS 40002 40316 . + 0 ID=cds-WP_000958598.1;Parent=gene-AD08_RS06510;Dbxref=Genbank:WP_000958598.1;Name=WP_000958598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311938.1;locus_tag=AD08_RS06510;product=antibiotic biosynthesis monooxygenase;protein_id=WP_000958598.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 40364 42256 . - . ID=gene-AD08_RS06505;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=AD08_RS06505;old_locus_tag=AD08_3401 NZ_JHDJ01000174.1 Protein Homology CDS 40364 42256 . - 0 ID=cds-WP_032219230.1;Parent=gene-AD08_RS06505;Dbxref=Genbank:WP_032219230.1;Name=WP_032219230.1;gbkey=CDS;gene=parE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417502.1;locus_tag=AD08_RS06505;product=DNA topoisomerase IV subunit B;protein_id=WP_032219230.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 42285 42866 . - . ID=gene-AD08_RS06500;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=AD08_RS06500;old_locus_tag=AD08_3402 NZ_JHDJ01000174.1 Protein Homology CDS 42285 42866 . - 0 ID=cds-WP_000105733.1;Parent=gene-AD08_RS06500;Dbxref=Genbank:WP_000105733.1;Name=WP_000105733.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311946.1;locus_tag=AD08_RS06500;product=esterase YqiA;protein_id=WP_000105733.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 42866 43693 . - . ID=gene-AD08_RS06495;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=AD08_RS06495;old_locus_tag=AD08_3403 NZ_JHDJ01000174.1 Protein Homology CDS 42866 43693 . - 0 ID=cds-WP_000444747.1;Parent=gene-AD08_RS06495;Dbxref=Genbank:WP_000444747.1;Name=WP_000444747.1;gbkey=CDS;gene=cpdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311947.1;locus_tag=AD08_RS06495;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444747.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 43718 44140 . - . ID=gene-AD08_RS06490;Name=AD08_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06490;old_locus_tag=AD08_3404 NZ_JHDJ01000174.1 Protein Homology CDS 43718 44140 . - 0 ID=cds-WP_000833393.1;Parent=gene-AD08_RS06490;Dbxref=Genbank:WP_000833393.1;Name=WP_000833393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311948.1;locus_tag=AD08_RS06490;product=DUF1249 family protein;protein_id=WP_000833393.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 44141 44770 . - . ID=gene-AD08_RS06485;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=AD08_RS06485;old_locus_tag=AD08_3405 NZ_JHDJ01000174.1 Protein Homology CDS 44141 44770 . - 0 ID=cds-WP_001426190.1;Parent=gene-AD08_RS06485;Dbxref=Genbank:WP_001426190.1;Name=WP_001426190.1;gbkey=CDS;gene=nudF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311949.1;locus_tag=AD08_RS06485;product=ADP-ribose diphosphatase;protein_id=WP_001426190.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 44975 46456 . + . ID=gene-AD08_RS06480;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=AD08_RS06480;old_locus_tag=AD08_3406 NZ_JHDJ01000174.1 Protein Homology CDS 44975 46456 . + 0 ID=cds-WP_000735278.1;Parent=gene-AD08_RS06480;Dbxref=Genbank:WP_000735278.1;Name=WP_000735278.1;gbkey=CDS;gene=tolC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417507.2;locus_tag=AD08_RS06480;product=outer membrane channel protein TolC;protein_id=WP_000735278.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 46604 47275 . + . ID=gene-AD08_RS06475;Name=AD08_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06475;old_locus_tag=AD08_3407 NZ_JHDJ01000174.1 Protein Homology CDS 46604 47275 . + 0 ID=cds-WP_001394848.1;Parent=gene-AD08_RS06475;Dbxref=Genbank:WP_001394848.1;Name=WP_001394848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417509.3;locus_tag=AD08_RS06475;product=DUF1190 family protein;protein_id=WP_001394848.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 47281 48441 . + . ID=gene-AD08_RS06470;Name=AD08_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06470;old_locus_tag=AD08_3408 NZ_JHDJ01000174.1 Protein Homology CDS 47281 48441 . + 0 ID=cds-WP_000442860.1;Parent=gene-AD08_RS06470;Dbxref=Genbank:WP_000442860.1;Name=WP_000442860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123077.1;locus_tag=AD08_RS06470;product=glutathionylspermidine synthase family protein;protein_id=WP_000442860.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 48479 49294 . - . ID=gene-AD08_RS06465;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=AD08_RS06465;old_locus_tag=AD08_3409 NZ_JHDJ01000174.1 Protein Homology CDS 48479 49294 . - 0 ID=cds-WP_000188362.1;Parent=gene-AD08_RS06465;Dbxref=Genbank:WP_000188362.1;Name=WP_000188362.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417511.3;locus_tag=AD08_RS06465;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_000188362.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 49410 50183 . + . ID=gene-AD08_RS06460;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=AD08_RS06460;old_locus_tag=AD08_3410 NZ_JHDJ01000174.1 Protein Homology CDS 49410 50183 . + 0 ID=cds-WP_001295627.1;Parent=gene-AD08_RS06460;Dbxref=Genbank:WP_001295627.1;Name=WP_001295627.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311955.1;locus_tag=AD08_RS06460;product=zinc transporter ZupT;protein_id=WP_001295627.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 50241 50411 . - . ID=gene-AD08_RS06455;Name=AD08_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06455;old_locus_tag=AD08_3411 NZ_JHDJ01000174.1 GeneMarkS-2+ CDS 50241 50411 . - 0 ID=cds-WP_000469266.1;Parent=gene-AD08_RS06455;Dbxref=Genbank:WP_000469266.1;Name=WP_000469266.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS06455;product=hypothetical protein;protein_id=WP_000469266.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 50673 51326 . - . ID=gene-AD08_RS06450;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=AD08_RS06450;old_locus_tag=AD08_3412 NZ_JHDJ01000174.1 Protein Homology CDS 50673 51326 . - 0 ID=cds-WP_001076997.1;Parent=gene-AD08_RS06450;Dbxref=Genbank:WP_001076997.1;Name=WP_001076997.1;gbkey=CDS;gene=ribB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001077009.1;locus_tag=AD08_RS06450;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076997.1;transl_table=11 NZ_JHDJ01000174.1 cmsearch riboswitch 51430 51578 . - . ID=id-NZ_JHDJ01000174.1:51430..51578;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_JHDJ01000174.1 RefSeq gene 51700 51990 . + . ID=gene-AD08_RS06445;Name=AD08_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06445;old_locus_tag=AD08_3413 NZ_JHDJ01000174.1 Protein Homology CDS 51700 51990 . + 0 ID=cds-WP_001394849.1;Parent=gene-AD08_RS06445;Dbxref=Genbank:WP_001394849.1;Name=WP_001394849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417514.4;locus_tag=AD08_RS06445;product=accessory factor UbiK family protein;protein_id=WP_001394849.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 52274 52825 . + . ID=gene-AD08_RS06440;Name=AD08_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06440;old_locus_tag=AD08_3414 NZ_JHDJ01000174.1 Protein Homology CDS 52274 52825 . + 0 ID=cds-WP_001272145.1;Parent=gene-AD08_RS06440;Dbxref=Genbank:WP_001272145.1;Name=WP_001272145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417515.1;locus_tag=AD08_RS06440;product=fimbrial-like protein;protein_id=WP_001272145.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 52885 55389 . + . ID=gene-AD08_RS06435;Name=AD08_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06435;old_locus_tag=AD08_3415 NZ_JHDJ01000174.1 Protein Homology CDS 52885 55389 . + 0 ID=cds-WP_000277103.1;Parent=gene-AD08_RS06435;Dbxref=Genbank:WP_000277103.1;Name=WP_000277103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480735.1;locus_tag=AD08_RS06435;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000277103.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 55405 56154 . + . ID=gene-AD08_RS06430;Name=AD08_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06430;old_locus_tag=AD08_3416 NZ_JHDJ01000174.1 Protein Homology CDS 55405 56154 . + 0 ID=cds-WP_001269824.1;Parent=gene-AD08_RS06430;Dbxref=Genbank:WP_001269824.1;Name=WP_001269824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417519.4;locus_tag=AD08_RS06430;product=molecular chaperone;protein_id=WP_001269824.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 56156 57220 . + . ID=gene-AD08_RS06425;Name=AD08_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06425;old_locus_tag=AD08_3417 NZ_JHDJ01000174.1 Protein Homology CDS 56156 57220 . + 0 ID=cds-WP_001269802.1;Parent=gene-AD08_RS06425;Dbxref=Genbank:WP_001269802.1;Name=WP_001269802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417520.1;locus_tag=AD08_RS06425;product=fimbrial protein;protein_id=WP_001269802.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 57263 57463 . - . ID=gene-AD08_RS06420;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=AD08_RS06420;old_locus_tag=AD08_3418 NZ_JHDJ01000174.1 Protein Homology CDS 57263 57463 . - 0 ID=cds-WP_000350095.1;Parent=gene-AD08_RS06420;Dbxref=Genbank:WP_000350095.1;Name=WP_000350095.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417521.1;locus_tag=AD08_RS06420;product=cell surface composition regulator GlgS;protein_id=WP_000350095.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 57732 58361 . + . ID=gene-AD08_RS06415;Name=AD08_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06415;old_locus_tag=AD08_3419 NZ_JHDJ01000174.1 Protein Homology CDS 57732 58361 . + 0 ID=cds-WP_001430940.1;Parent=gene-AD08_RS06415;Dbxref=Genbank:WP_001430940.1;Name=WP_001430940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417522.1;locus_tag=AD08_RS06415;product=YqiJ family protein;protein_id=WP_001430940.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 58388 60049 . + . ID=gene-AD08_RS06410;Name=AD08_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06410;old_locus_tag=AD08_3420 NZ_JHDJ01000174.1 Protein Homology CDS 58388 60049 . + 0 ID=cds-WP_001311137.1;Parent=gene-AD08_RS06410;Dbxref=Genbank:WP_001311137.1;Name=WP_001311137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417523.1;locus_tag=AD08_RS06410;product=flotillin family protein;protein_id=WP_001311137.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 60290 60349 . + . ID=gene-AD08_RS31340;Name=AD08_RS31340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31340 NZ_JHDJ01000174.1 Protein Homology CDS 60290 60349 . + 0 ID=cds-WP_001387081.1;Parent=gene-AD08_RS31340;Dbxref=Genbank:WP_001387081.1;Name=WP_001387081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791256.1;locus_tag=AD08_RS31340;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387081.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 60665 60724 . + . ID=gene-AD08_RS29470;Name=ibsE;gbkey=Gene;gene=ibsE;gene_biotype=protein_coding;locus_tag=AD08_RS29470 NZ_JHDJ01000174.1 Protein Homology CDS 60665 60724 . + 0 ID=cds-WP_010723221.1;Parent=gene-AD08_RS29470;Dbxref=Genbank:WP_010723221.1;Name=WP_010723221.1;gbkey=CDS;gene=ibsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791257.1;locus_tag=AD08_RS29470;product=type I toxin-antitoxin system toxin IbsE;protein_id=WP_010723221.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 60844 62277 . - . ID=gene-AD08_RS06405;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=AD08_RS06405;old_locus_tag=AD08_3421 NZ_JHDJ01000174.1 Protein Homology CDS 60844 62277 . - 0 ID=cds-WP_000869178.1;Parent=gene-AD08_RS06405;Dbxref=Genbank:WP_000869178.1;Name=WP_000869178.1;gbkey=CDS;gene=hldE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417524.1;locus_tag=AD08_RS06405;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000869178.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 62325 65165 . - . ID=gene-AD08_RS06400;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=AD08_RS06400;old_locus_tag=AD08_3422 NZ_JHDJ01000174.1 Protein Homology CDS 62325 65165 . - 0 ID=cds-WP_001301081.1;Parent=gene-AD08_RS06400;Dbxref=Genbank:WP_001301081.1;Name=WP_001301081.1;gbkey=CDS;gene=glnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417525.1;locus_tag=AD08_RS06400;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_001301081.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 65188 66489 . - . ID=gene-AD08_RS06395;Name=AD08_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06395;old_locus_tag=AD08_3423 NZ_JHDJ01000174.1 Protein Homology CDS 65188 66489 . - 0 ID=cds-WP_000046281.1;Parent=gene-AD08_RS06395;Dbxref=Genbank:WP_000046281.1;Name=WP_000046281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417526.1;locus_tag=AD08_RS06395;product=inorganic triphosphatase;protein_id=WP_000046281.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 66731 67351 . + . ID=gene-AD08_RS06385;Name=AD08_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06385;old_locus_tag=AD08_3425 NZ_JHDJ01000174.1 Protein Homology CDS 66731 67351 . + 0 ID=cds-WP_001125331.1;Parent=gene-AD08_RS06385;Dbxref=Genbank:WP_001125331.1;Name=WP_001125331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311965.1;locus_tag=AD08_RS06385;product=SH3 domain-containing protein;protein_id=WP_001125331.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 67415 68653 . + . ID=gene-AD08_RS06380;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=AD08_RS06380;old_locus_tag=AD08_3426 NZ_JHDJ01000174.1 Protein Homology CDS 67415 68653 . + 0 ID=cds-WP_000708487.1;Parent=gene-AD08_RS06380;Dbxref=Genbank:WP_000708487.1;Name=WP_000708487.1;gbkey=CDS;gene=cca;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417528.1;locus_tag=AD08_RS06380;product=fused tRNA nucleotidyltransferase/2'%2C3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca;protein_id=WP_000708487.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 68834 69655 . - . ID=gene-AD08_RS06375;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=AD08_RS06375;old_locus_tag=AD08_3427 NZ_JHDJ01000174.1 Protein Homology CDS 68834 69655 . - 0 ID=cds-WP_001510396.1;Parent=gene-AD08_RS06375;Dbxref=Genbank:WP_001510396.1;Name=WP_001510396.1;gbkey=CDS;gene=bacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=AD08_RS06375;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001510396.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 69745 70113 . - . ID=gene-AD08_RS06370;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=AD08_RS06370;old_locus_tag=AD08_3428 NZ_JHDJ01000174.1 Protein Homology CDS 69745 70113 . - 0 ID=cds-WP_001295541.1;Parent=gene-AD08_RS06370;Dbxref=Genbank:WP_001295541.1;Name=WP_001295541.1;gbkey=CDS;gene=folB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708868.2;locus_tag=AD08_RS06370;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_001295541.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 70218 70835 . + . ID=gene-AD08_RS06365;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=AD08_RS06365;old_locus_tag=AD08_3429 NZ_JHDJ01000174.1 Protein Homology CDS 70218 70835 . + 0 ID=cds-WP_001272796.1;Parent=gene-AD08_RS06365;Dbxref=Genbank:WP_001272796.1;Name=WP_001272796.1;gbkey=CDS;gene=plsY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311969.1;locus_tag=AD08_RS06365;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272796.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 70848 71780 . - . ID=gene-AD08_RS06360;Name=ttdR;gbkey=Gene;gene=ttdR;gene_biotype=protein_coding;gene_synonym=dan;locus_tag=AD08_RS06360;old_locus_tag=AD08_3430 NZ_JHDJ01000174.1 Protein Homology CDS 70848 71780 . - 0 ID=cds-WP_000935206.1;Parent=gene-AD08_RS06360;Dbxref=Genbank:WP_000935206.1;Name=WP_000935206.1;gbkey=CDS;gene=ttdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417532.1;locus_tag=AD08_RS06360;product=DNA-binding transcriptional activator TtdR;protein_id=WP_000935206.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 71987 72898 . + . ID=gene-AD08_RS06355;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=AD08_RS06355;old_locus_tag=AD08_3431 NZ_JHDJ01000174.1 Protein Homology CDS 71987 72898 . + 0 ID=cds-WP_000986797.1;Parent=gene-AD08_RS06355;Dbxref=Genbank:WP_000986797.1;Name=WP_000986797.1;gbkey=CDS;gene=ttdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417533.1;locus_tag=AD08_RS06355;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000986797.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 72895 73500 . + . ID=gene-AD08_RS06350;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=AD08_RS06350;old_locus_tag=AD08_3432 NZ_JHDJ01000174.1 Protein Homology CDS 72895 73500 . + 0 ID=cds-WP_000722957.1;Parent=gene-AD08_RS06350;Dbxref=Genbank:WP_000722957.1;Name=WP_000722957.1;gbkey=CDS;gene=ttdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417534.1;locus_tag=AD08_RS06350;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000722957.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq pseudogene 73548 75011 . + . ID=gene-AD08_RS0126690;Name=AD08_RS0126690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0126690;pseudo=true NZ_JHDJ01000174.1 Protein Homology CDS 73548 75011 . + 0 ID=cds-AD08_RS0126690;Parent=gene-AD08_RS0126690;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417535.1;locus_tag=AD08_RS0126690;product=anion permease;pseudo=true;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 75054 76067 . - . ID=gene-AD08_RS06345;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=AD08_RS06345;old_locus_tag=AD08_3435 NZ_JHDJ01000174.1 Protein Homology CDS 75054 76067 . - 0 ID=cds-WP_001264352.1;Parent=gene-AD08_RS06345;Dbxref=Genbank:WP_001264352.1;Name=WP_001264352.1;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=AD08_RS06345;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264352.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 76305 76520 . + . ID=gene-AD08_RS06340;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=AD08_RS06340;old_locus_tag=AD08_3436 NZ_JHDJ01000174.1 Protein Homology CDS 76305 76520 . + 0 ID=cds-WP_001392680.1;Parent=gene-AD08_RS06340;Dbxref=Genbank:WP_001392680.1;Name=WP_001392680.1;gbkey=CDS;gene=rpsU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=AD08_RS06340;product=30S ribosomal protein S21;protein_id=WP_001392680.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 76631 78376 . + . ID=gene-AD08_RS06335;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AD08_RS06335;old_locus_tag=AD08_3437 NZ_JHDJ01000174.1 Protein Homology CDS 76631 78376 . + 0 ID=cds-WP_000918827.1;Parent=gene-AD08_RS06335;Dbxref=Genbank:WP_000918827.1;Name=WP_000918827.1;gbkey=CDS;gene=dnaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311976.1;locus_tag=AD08_RS06335;product=DNA primase;protein_id=WP_000918827.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 78571 80412 . + . ID=gene-AD08_RS06330;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=AD08_RS06330;old_locus_tag=AD08_3438 NZ_JHDJ01000174.1 Protein Homology CDS 78571 80412 . + 0 ID=cds-WP_000437375.1;Parent=gene-AD08_RS06330;Dbxref=Genbank:WP_000437375.1;Name=WP_000437375.1;gbkey=CDS;gene=rpoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311977.1;locus_tag=AD08_RS06330;product=RNA polymerase sigma factor RpoD;protein_id=WP_000437375.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 80491 80997 . - . ID=gene-AD08_RS06325;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=AD08_RS06325;old_locus_tag=AD08_3439 NZ_JHDJ01000174.1 Protein Homology CDS 80491 80997 . - 0 ID=cds-WP_000228937.1;Parent=gene-AD08_RS06325;Dbxref=Genbank:WP_000228937.1;Name=WP_000228937.1;gbkey=CDS;gene=mug;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417540.1;locus_tag=AD08_RS06325;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000228937.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 81122 81197 . + . ID=gene-AD08_RS06320;Name=AD08_RS06320;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS06320;old_locus_tag=AD08_3440 NZ_JHDJ01000174.1 tRNAscan-SE tRNA 81122 81197 . + . ID=rna-AD08_RS06320;Parent=gene-AD08_RS06320;anticodon=(pos:81155..81157);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS06320;product=tRNA-Ile NZ_JHDJ01000174.1 tRNAscan-SE exon 81122 81197 . + . ID=exon-AD08_RS06320-1;Parent=rna-AD08_RS06320;anticodon=(pos:81155..81157);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS06320;product=tRNA-Ile NZ_JHDJ01000174.1 RefSeq gene 81251 82015 . - . ID=gene-AD08_RS06315;Name=nfeF;gbkey=Gene;gene=nfeF;gene_biotype=protein_coding;locus_tag=AD08_RS06315;old_locus_tag=AD08_3441 NZ_JHDJ01000174.1 Protein Homology CDS 81251 82015 . - 0 ID=cds-WP_032219233.1;Parent=gene-AD08_RS06315;Dbxref=Genbank:WP_032219233.1;Name=WP_032219233.1;gbkey=CDS;gene=nfeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311979.1;locus_tag=AD08_RS06315;product=NADPH-dependent ferric chelate reductase;protein_id=WP_032219233.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 82303 82926 . + . ID=gene-AD08_RS06310;Name=AD08_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06310;old_locus_tag=AD08_3442 NZ_JHDJ01000174.1 Protein Homology CDS 82303 82926 . + 0 ID=cds-WP_000018003.1;Parent=gene-AD08_RS06310;Dbxref=Genbank:WP_000018003.1;Name=WP_000018003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417542.1;locus_tag=AD08_RS06310;product=DNA-binding transcriptional regulator NfeR;protein_id=WP_000018003.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 83080 84600 . - . ID=gene-AD08_RS06305;Name=AD08_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06305;old_locus_tag=AD08_3443 NZ_JHDJ01000174.1 Protein Homology CDS 83080 84600 . - 0 ID=cds-WP_000094721.1;Parent=gene-AD08_RS06305;Dbxref=Genbank:WP_000094721.1;Name=WP_000094721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417543.1;locus_tag=AD08_RS06305;product=aerotaxis sensor receptor Aer;protein_id=WP_000094721.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 84907 86397 . + . ID=gene-AD08_RS06300;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=AD08_RS06300;old_locus_tag=AD08_3444 NZ_JHDJ01000174.1 Protein Homology CDS 84907 86397 . + 0 ID=cds-WP_000627220.1;Parent=gene-AD08_RS06300;Dbxref=Genbank:WP_000627220.1;Name=WP_000627220.1;gbkey=CDS;gene=ygjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311982.4;locus_tag=AD08_RS06300;product=putrescine aminotransferase;protein_id=WP_000627220.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 86439 86771 . - . ID=gene-AD08_RS06295;Name=AD08_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06295;old_locus_tag=AD08_3445 NZ_JHDJ01000174.1 Protein Homology CDS 86439 86771 . - 0 ID=cds-WP_000450594.1;Parent=gene-AD08_RS06295;Dbxref=Genbank:WP_000450594.1;Name=WP_000450594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417545.1;locus_tag=AD08_RS06295;product=tRNA-binding protein;protein_id=WP_000450594.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 86990 87973 . + . ID=gene-AD08_RS06290;Name=ebgR;gbkey=Gene;gene=ebgR;gene_biotype=protein_coding;locus_tag=AD08_RS06290;old_locus_tag=AD08_3446 NZ_JHDJ01000174.1 Protein Homology CDS 86990 87973 . + 0 ID=cds-WP_000212475.1;Parent=gene-AD08_RS06290;Dbxref=Genbank:WP_000212475.1;Name=WP_000212475.1;gbkey=CDS;gene=ebgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417546.1;locus_tag=AD08_RS06290;product=transcriptional regulator EbgR;protein_id=WP_000212475.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 88157 91249 . + . ID=gene-AD08_RS06285;Name=ebgA;gbkey=Gene;gene=ebgA;gene_biotype=protein_coding;locus_tag=AD08_RS06285;old_locus_tag=AD08_3447 NZ_JHDJ01000174.1 Protein Homology CDS 88157 91249 . + 0 ID=cds-WP_001082856.1;Parent=gene-AD08_RS06285;Dbxref=Genbank:WP_001082856.1;Name=WP_001082856.1;gbkey=CDS;gene=ebgA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026199.1;locus_tag=AD08_RS06285;product=beta-galactosidase subunit alpha;protein_id=WP_001082856.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 91246 91695 . + . ID=gene-AD08_RS06280;Name=AD08_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06280;old_locus_tag=AD08_3448 NZ_JHDJ01000174.1 Protein Homology CDS 91246 91695 . + 0 ID=cds-WP_001219954.1;Parent=gene-AD08_RS06280;Dbxref=Genbank:WP_001219954.1;Name=WP_001219954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417548.1;locus_tag=AD08_RS06280;product=beta-galactosidase subunit beta;protein_id=WP_001219954.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 91758 93191 . + . ID=gene-AD08_RS06275;Name=AD08_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06275;old_locus_tag=AD08_3449 NZ_JHDJ01000174.1 Protein Homology CDS 91758 93191 . + 0 ID=cds-WP_001414007.1;Parent=gene-AD08_RS06275;Dbxref=Genbank:WP_001414007.1;Name=WP_001414007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026200.1;locus_tag=AD08_RS06275;product=amino acid permease;protein_id=WP_001414007.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 93325 94395 . + . ID=gene-AD08_RS06270;Name=ygjJ;gbkey=Gene;gene=ygjJ;gene_biotype=protein_coding;locus_tag=AD08_RS06270;old_locus_tag=AD08_3450 NZ_JHDJ01000174.1 Protein Homology CDS 93325 94395 . + 0 ID=cds-WP_000767652.1;Parent=gene-AD08_RS06270;Dbxref=Genbank:WP_000767652.1;Name=WP_000767652.1;gbkey=CDS;gene=ygjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417550.1;locus_tag=AD08_RS06270;product=protein YgjJ;protein_id=WP_000767652.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq pseudogene 94412 96762 . + . ID=gene-AD08_RS06265;Name=ygjK;gbkey=Gene;gene=ygjK;gene_biotype=pseudogene;locus_tag=AD08_RS06265;old_locus_tag=AD08_3451;pseudo=true NZ_JHDJ01000174.1 Protein Homology CDS 94412 96762 . + 0 ID=cds-AD08_RS06265;Parent=gene-AD08_RS06265;Note=frameshifted;gbkey=CDS;gene=ygjK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417551.1;locus_tag=AD08_RS06265;product=alpha-glucosidase;pseudo=true;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 97188 99206 . + . ID=gene-AD08_RS06260;Name=AD08_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06260;old_locus_tag=AD08_3453 NZ_JHDJ01000174.1 Protein Homology CDS 97188 99206 . + 0 ID=cds-WP_000121433.1;Parent=gene-AD08_RS06260;Dbxref=Genbank:WP_000121433.1;Name=WP_000121433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417552.1;locus_tag=AD08_RS06260;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_000121433.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 99251 99667 . - . ID=gene-AD08_RS06255;Name=higA;gbkey=Gene;gene=higA;gene_biotype=protein_coding;locus_tag=AD08_RS06255;old_locus_tag=AD08_3454 NZ_JHDJ01000174.1 Protein Homology CDS 99251 99667 . - 0 ID=cds-WP_000560266.1;Parent=gene-AD08_RS06255;Dbxref=Genbank:WP_000560266.1;Name=WP_000560266.1;gbkey=CDS;gene=higA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417553.1;locus_tag=AD08_RS06255;product=type II toxin-antitoxin system antitoxin HigA;protein_id=WP_000560266.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 99664 99978 . - . ID=gene-AD08_RS06250;Name=AD08_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06250;old_locus_tag=AD08_3455 NZ_JHDJ01000174.1 Protein Homology CDS 99664 99978 . - 0 ID=cds-WP_000550189.1;Parent=gene-AD08_RS06250;Dbxref=Genbank:WP_000550189.1;Name=WP_000550189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311992.1;locus_tag=AD08_RS06250;product=type II toxin-antitoxin system toxin HigB;protein_id=WP_000550189.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 100262 101398 . - . ID=gene-AD08_RS06245;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=AD08_RS06245;old_locus_tag=AD08_3456 NZ_JHDJ01000174.1 Protein Homology CDS 100262 101398 . - 0 ID=cds-WP_000018695.1;Parent=gene-AD08_RS06245;Dbxref=Genbank:WP_000018695.1;Name=WP_000018695.1;gbkey=CDS;gene=rlmG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417555.4;locus_tag=AD08_RS06245;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000018695.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 101483 101986 . + . ID=gene-AD08_RS06240;Name=AD08_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06240;old_locus_tag=AD08_3457 NZ_JHDJ01000174.1 Protein Homology CDS 101483 101986 . + 0 ID=cds-WP_001333820.1;Parent=gene-AD08_RS06240;Dbxref=Genbank:WP_001333820.1;Name=WP_001333820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417556.2;locus_tag=AD08_RS06240;product=M48 family metallopeptidase;protein_id=WP_001333820.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 102063 102755 . + . ID=gene-AD08_RS06235;Name=AD08_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06235;old_locus_tag=AD08_3458 NZ_JHDJ01000174.1 Protein Homology CDS 102063 102755 . + 0 ID=cds-WP_000942548.1;Parent=gene-AD08_RS06235;Dbxref=Genbank:WP_000942548.1;Name=WP_000942548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417557.1;locus_tag=AD08_RS06235;product=vancomycin high temperature exclusion protein;protein_id=WP_000942548.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 102834 103820 . + . ID=gene-AD08_RS06230;Name=AD08_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06230;old_locus_tag=AD08_3459 NZ_JHDJ01000174.1 Protein Homology CDS 102834 103820 . + 0 ID=cds-WP_000617698.1;Parent=gene-AD08_RS06230;Dbxref=Genbank:WP_000617698.1;Name=WP_000617698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417558.2;locus_tag=AD08_RS06230;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_000617698.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 104103 105068 . + . ID=gene-AD08_RS06225;Name=alx;gbkey=Gene;gene=alx;gene_biotype=protein_coding;locus_tag=AD08_RS06225;old_locus_tag=AD08_3460 NZ_JHDJ01000174.1 Protein Homology CDS 104103 105068 . + 0 ID=cds-WP_001098806.1;Parent=gene-AD08_RS06225;Dbxref=Genbank:WP_001098806.1;Name=WP_001098806.1;gbkey=CDS;gene=alx;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026201.1;locus_tag=AD08_RS06225;product=TerC family membrane protein Alx;protein_id=WP_001098806.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 105469 106713 . + . ID=gene-AD08_RS06220;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=AD08_RS06220;old_locus_tag=AD08_3461 NZ_JHDJ01000174.1 Protein Homology CDS 105469 106713 . + 0 ID=cds-WP_000211655.1;Parent=gene-AD08_RS06220;Dbxref=Genbank:WP_000211655.1;Name=WP_000211655.1;gbkey=CDS;gene=sstT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311998.1;locus_tag=AD08_RS06220;product=serine/threonine transporter SstT;protein_id=WP_000211655.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 106718 107269 . - . ID=gene-AD08_RS06215;Name=AD08_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06215;old_locus_tag=AD08_3462 NZ_JHDJ01000174.1 Protein Homology CDS 106718 107269 . - 0 ID=cds-WP_000128138.1;Parent=gene-AD08_RS06215;Dbxref=Genbank:WP_000128138.1;Name=WP_000128138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417561.1;locus_tag=AD08_RS06215;product=YgjV family protein;protein_id=WP_000128138.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 107352 108839 . - . ID=gene-AD08_RS06210;Name=AD08_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06210;old_locus_tag=AD08_3463 NZ_JHDJ01000174.1 Protein Homology CDS 107352 108839 . - 0 ID=cds-WP_001199390.1;Parent=gene-AD08_RS06210;Dbxref=Genbank:WP_001199390.1;Name=WP_001199390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199350.1;locus_tag=AD08_RS06210;product=altronate dehydratase;protein_id=WP_001199390.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 108854 110266 . - . ID=gene-AD08_RS06205;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=AD08_RS06205;old_locus_tag=AD08_3464 NZ_JHDJ01000174.1 Protein Homology CDS 108854 110266 . - 0 ID=cds-WP_000187442.1;Parent=gene-AD08_RS06205;Dbxref=Genbank:WP_000187442.1;Name=WP_000187442.1;gbkey=CDS;gene=uxaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077755.1;locus_tag=AD08_RS06205;product=glucuronate isomerase;protein_id=WP_000187442.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 110749 112047 . + . ID=gene-AD08_RS06200;Name=AD08_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06200;old_locus_tag=AD08_3465 NZ_JHDJ01000174.1 Protein Homology CDS 110749 112047 . + 0 ID=cds-WP_001226465.1;Parent=gene-AD08_RS06200;Dbxref=Genbank:WP_001226465.1;Name=WP_001226465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708898.2;locus_tag=AD08_RS06200;product=hexuronate transporter ExuT;protein_id=WP_001226465.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 112177 112953 . + . ID=gene-AD08_RS06195;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=AD08_RS06195;old_locus_tag=AD08_3466 NZ_JHDJ01000174.1 Protein Homology CDS 112177 112953 . + 0 ID=cds-WP_000406488.1;Parent=gene-AD08_RS06195;Dbxref=Genbank:WP_000406488.1;Name=WP_000406488.1;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708902.1;locus_tag=AD08_RS06195;product=transcriptional regulator ExuR;protein_id=WP_000406488.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 113298 113960 . + . ID=gene-AD08_RS06190;Name=AD08_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06190;old_locus_tag=AD08_3468 NZ_JHDJ01000174.1 Protein Homology CDS 113298 113960 . + 0 ID=cds-WP_000422149.1;Parent=gene-AD08_RS06190;Dbxref=Genbank:WP_000422149.1;Name=WP_000422149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312004.1;locus_tag=AD08_RS06190;product=DedA family protein;protein_id=WP_000422149.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 113964 114347 . + . ID=gene-AD08_RS06185;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=AD08_RS06185;old_locus_tag=AD08_3469 NZ_JHDJ01000174.1 Protein Homology CDS 113964 114347 . + 0 ID=cds-WP_001166760.1;Parent=gene-AD08_RS06185;Dbxref=Genbank:WP_001166760.1;Name=WP_001166760.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417567.1;locus_tag=AD08_RS06185;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_001166760.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 114494 114862 . + . ID=gene-AD08_RS06180;Name=AD08_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06180;old_locus_tag=AD08_3470 NZ_JHDJ01000174.1 Protein Homology CDS 114494 114862 . + 0 ID=cds-WP_001295543.1;Parent=gene-AD08_RS06180;Dbxref=Genbank:WP_001295543.1;Name=WP_001295543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417568.2;locus_tag=AD08_RS06180;product=DUF1090 domain-containing protein;protein_id=WP_001295543.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 114900 115205 . + . ID=gene-AD08_RS06175;Name=AD08_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06175;old_locus_tag=AD08_3471 NZ_JHDJ01000174.1 Protein Homology CDS 114900 115205 . + 0 ID=cds-WP_000031415.1;Parent=gene-AD08_RS06175;Dbxref=Genbank:WP_000031415.1;Name=WP_000031415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312007.1;locus_tag=AD08_RS06175;product=DUF883 domain-containing protein;protein_id=WP_000031415.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 115208 115612 . + . ID=gene-AD08_RS06170;Name=AD08_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06170;old_locus_tag=AD08_3472 NZ_JHDJ01000174.1 Protein Homology CDS 115208 115612 . + 0 ID=cds-WP_000785722.1;Parent=gene-AD08_RS06170;Dbxref=Genbank:WP_000785722.1;Name=WP_000785722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312008.1;locus_tag=AD08_RS06170;product=hypothetical protein;protein_id=WP_000785722.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 115602 115901 . + . ID=gene-AD08_RS06165;Name=AD08_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06165;old_locus_tag=AD08_3473 NZ_JHDJ01000174.1 Protein Homology CDS 115602 115901 . + 0 ID=cds-WP_000096091.1;Parent=gene-AD08_RS06165;Dbxref=Genbank:WP_000096091.1;Name=WP_000096091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417571.1;locus_tag=AD08_RS06165;product=hypothetical protein;protein_id=WP_000096091.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 115997 116479 . + . ID=gene-AD08_RS06160;Name=AD08_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06160;old_locus_tag=AD08_3474 NZ_JHDJ01000174.1 Protein Homology CDS 115997 116479 . + 0 ID=cds-WP_000603618.1;Parent=gene-AD08_RS06160;Dbxref=Genbank:WP_000603618.1;Name=WP_000603618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312010.1;locus_tag=AD08_RS06160;product=DoxX family protein;protein_id=WP_000603618.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 116549 117535 . + . ID=gene-AD08_RS06155;Name=AD08_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06155;old_locus_tag=AD08_3475 NZ_JHDJ01000174.1 Protein Homology CDS 116549 117535 . + 0 ID=cds-WP_000531213.1;Parent=gene-AD08_RS06155;Dbxref=Genbank:WP_000531213.1;Name=WP_000531213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417573.1;locus_tag=AD08_RS06155;product=glutathionyl-hydroquinone reductase YqjG;protein_id=WP_000531213.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 117829 118194 . + . ID=gene-AD08_RS06150;Name=AD08_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06150;old_locus_tag=AD08_3476 NZ_JHDJ01000174.1 Protein Homology CDS 117829 118194 . + 0 ID=cds-WP_000384145.1;Parent=gene-AD08_RS06150;Dbxref=Genbank:WP_000384145.1;Name=WP_000384145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312012.1;locus_tag=AD08_RS06150;product=DUF805 domain-containing protein;protein_id=WP_000384145.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 118436 118792 . + . ID=gene-AD08_RS06145;Name=AD08_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06145;old_locus_tag=AD08_3477 NZ_JHDJ01000174.1 Protein Homology CDS 118436 118792 . + 0 ID=cds-WP_001198807.1;Parent=gene-AD08_RS06145;Dbxref=Genbank:WP_001198807.1;Name=WP_001198807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312013.1;locus_tag=AD08_RS06145;product=DUF805 domain-containing protein;protein_id=WP_001198807.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 118843 119739 . - . ID=gene-AD08_RS06140;Name=AD08_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06140;old_locus_tag=AD08_3478 NZ_JHDJ01000174.1 Protein Homology CDS 118843 119739 . - 0 ID=cds-WP_032219236.1;Parent=gene-AD08_RS06140;Dbxref=Genbank:WP_032219236.1;Name=WP_032219236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312014.1;locus_tag=AD08_RS06140;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_032219236.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 119844 120545 . + . ID=gene-AD08_RS06135;Name=AD08_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06135;old_locus_tag=AD08_3479 NZ_JHDJ01000174.1 Protein Homology CDS 119844 120545 . + 0 ID=cds-WP_000633576.1;Parent=gene-AD08_RS06135;Dbxref=Genbank:WP_000633576.1;Name=WP_000633576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417577.1;locus_tag=AD08_RS06135;product=pirin family protein;protein_id=WP_000633576.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 120568 120732 . + . ID=gene-AD08_RS06130;Name=AD08_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06130;old_locus_tag=AD08_3480 NZ_JHDJ01000174.1 Protein Homology CDS 120568 120732 . + 0 ID=cds-WP_001345966.1;Parent=gene-AD08_RS06130;Dbxref=Genbank:WP_001345966.1;Name=WP_001345966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417578.2;locus_tag=AD08_RS06130;product=hypothetical protein;protein_id=WP_001345966.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 120866 122176 . - . ID=gene-AD08_RS06125;Name=AD08_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06125;old_locus_tag=AD08_3481 NZ_JHDJ01000174.1 Protein Homology CDS 120866 122176 . - 0 ID=cds-WP_000460499.1;Parent=gene-AD08_RS06125;Dbxref=Genbank:WP_000460499.1;Name=WP_000460499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026202.1;locus_tag=AD08_RS06125;product=serine dehydratase subunit alpha family protein;protein_id=WP_000460499.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 122204 123535 . - . ID=gene-AD08_RS06120;Name=AD08_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06120;old_locus_tag=AD08_3482 NZ_JHDJ01000174.1 Protein Homology CDS 122204 123535 . - 0 ID=cds-WP_032219238.1;Parent=gene-AD08_RS06120;Dbxref=Genbank:WP_032219238.1;Name=WP_032219238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026203.3;locus_tag=AD08_RS06120;product=HAAAP family serine/threonine permease;protein_id=WP_032219238.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 123810 125174 . - . ID=gene-AD08_RS06115;Name=AD08_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06115;old_locus_tag=AD08_3483 NZ_JHDJ01000174.1 Protein Homology CDS 123810 125174 . - 0 ID=cds-WP_000622126.1;Parent=gene-AD08_RS06115;Dbxref=Genbank:WP_000622126.1;Name=WP_000622126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026204.1;locus_tag=AD08_RS06115;product=L-serine ammonia-lyase;protein_id=WP_000622126.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 125246 125635 . - . ID=gene-AD08_RS06110;Name=AD08_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06110;old_locus_tag=AD08_3484 NZ_JHDJ01000174.1 Protein Homology CDS 125246 125635 . - 0 ID=cds-WP_000719990.1;Parent=gene-AD08_RS06110;Dbxref=Genbank:WP_000719990.1;Name=WP_000719990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312020.2;locus_tag=AD08_RS06110;product=enamine/imine deaminase;protein_id=WP_000719990.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 125649 127943 . - . ID=gene-AD08_RS06105;Name=tdcE;gbkey=Gene;gene=tdcE;gene_biotype=protein_coding;locus_tag=AD08_RS06105;old_locus_tag=AD08_3485 NZ_JHDJ01000174.1 Protein Homology CDS 125649 127943 . - 0 ID=cds-WP_000861734.1;Parent=gene-AD08_RS06105;Dbxref=Genbank:WP_000861734.1;Name=WP_000861734.1;gbkey=CDS;gene=tdcE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026205.1;locus_tag=AD08_RS06105;product=2-ketobutyrate formate-lyase/pyruvate formate-lyase;protein_id=WP_000861734.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 127977 129185 . - . ID=gene-AD08_RS06100;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=AD08_RS06100;old_locus_tag=AD08_3486 NZ_JHDJ01000174.1 Protein Homology CDS 127977 129185 . - 0 ID=cds-WP_001295545.1;Parent=gene-AD08_RS06100;Dbxref=Genbank:WP_001295545.1;Name=WP_001295545.1;gbkey=CDS;gene=tdcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417585.2;locus_tag=AD08_RS06100;product=propionate kinase;protein_id=WP_001295545.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 129211 130542 . - . ID=gene-AD08_RS06095;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=AD08_RS06095;old_locus_tag=AD08_3487 NZ_JHDJ01000174.1 Protein Homology CDS 129211 130542 . - 0 ID=cds-WP_000107723.1;Parent=gene-AD08_RS06095;Dbxref=Genbank:WP_000107723.1;Name=WP_000107723.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312023.1;locus_tag=AD08_RS06095;product=threonine/serine transporter TdcC;protein_id=WP_000107723.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 130564 131553 . - . ID=gene-AD08_RS06090;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=AD08_RS06090;old_locus_tag=AD08_3488 NZ_JHDJ01000174.1 Protein Homology CDS 130564 131553 . - 0 ID=cds-WP_000548347.1;Parent=gene-AD08_RS06090;Dbxref=Genbank:WP_000548347.1;Name=WP_000548347.1;gbkey=CDS;gene=tdcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312024.1;locus_tag=AD08_RS06090;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548347.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 131652 132590 . - . ID=gene-AD08_RS06085;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=AD08_RS06085;old_locus_tag=AD08_3489 NZ_JHDJ01000174.1 Protein Homology CDS 131652 132590 . - 0 ID=cds-WP_001462781.1;Parent=gene-AD08_RS06085;Dbxref=Genbank:WP_001462781.1;Name=WP_001462781.1;gbkey=CDS;gene=tdcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312025.1;locus_tag=AD08_RS06085;product=transcriptional regulator TdcA;protein_id=WP_001462781.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 132779 133123 . + . ID=gene-AD08_RS06080;Name=tdcR;gbkey=Gene;gene=tdcR;gene_biotype=protein_coding;locus_tag=AD08_RS06080;old_locus_tag=AD08_3490 NZ_JHDJ01000174.1 Protein Homology CDS 132779 133123 . + 0 ID=cds-WP_000145840.1;Parent=gene-AD08_RS06080;Dbxref=Genbank:WP_000145840.1;Name=WP_000145840.1;gbkey=CDS;gene=tdcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312026.1;locus_tag=AD08_RS06080;product=DNA-binding transcriptional activator TdcR;protein_id=WP_000145840.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 133379 133918 . + . ID=gene-AD08_RS06075;Name=AD08_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06075;old_locus_tag=AD08_3491 NZ_JHDJ01000174.1 Protein Homology CDS 133379 133918 . + 0 ID=cds-WP_000675733.1;Parent=gene-AD08_RS06075;Dbxref=Genbank:WP_000675733.1;Name=WP_000675733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417590.2;locus_tag=AD08_RS06075;product=hypothetical protein;protein_id=WP_000675733.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 133940 135127 . + . ID=gene-AD08_RS06070;Name=AD08_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06070;old_locus_tag=AD08_3492 NZ_JHDJ01000174.1 Protein Homology CDS 133940 135127 . + 0 ID=cds-WP_000484598.1-2;Parent=gene-AD08_RS06070;Dbxref=Genbank:WP_000484598.1;Name=WP_000484598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417591.1;locus_tag=AD08_RS06070;product=YhaC family protein;protein_id=WP_000484598.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 135854 136230 . - . ID=gene-AD08_RS27380;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=AD08_RS27380 NZ_JHDJ01000174.1 cmsearch RNase_P_RNA 135854 136230 . - . ID=rna-AD08_RS27380;Parent=gene-AD08_RS27380;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27380;product=RNase P RNA component class A NZ_JHDJ01000174.1 cmsearch exon 135854 136230 . - . ID=exon-AD08_RS27380-1;Parent=rna-AD08_RS27380;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS27380;product=RNase P RNA component class A NZ_JHDJ01000174.1 RefSeq gene 136263 137408 . - . ID=gene-AD08_RS06065;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=AD08_RS06065;old_locus_tag=AD08_3494 NZ_JHDJ01000174.1 Protein Homology CDS 136263 137408 . - 0 ID=cds-WP_001300387.1;Parent=gene-AD08_RS06065;Dbxref=Genbank:WP_001300387.1;Name=WP_001300387.1;gbkey=CDS;gene=garK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417593.4;locus_tag=AD08_RS06065;product=glycerate 2-kinase;protein_id=WP_001300387.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 137505 138395 . - . ID=gene-AD08_RS06060;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=AD08_RS06060;old_locus_tag=AD08_3495 NZ_JHDJ01000174.1 Protein Homology CDS 137505 138395 . - 0 ID=cds-WP_001303675.1;Parent=gene-AD08_RS06060;Dbxref=Genbank:WP_001303675.1;Name=WP_001303675.1;gbkey=CDS;gene=garR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312030.2;locus_tag=AD08_RS06060;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_001303675.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 138425 139195 . - . ID=gene-AD08_RS06055;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=AD08_RS06055;old_locus_tag=AD08_3496 NZ_JHDJ01000174.1 Protein Homology CDS 138425 139195 . - 0 ID=cds-WP_001058209.1;Parent=gene-AD08_RS06055;Dbxref=Genbank:WP_001058209.1;Name=WP_001058209.1;gbkey=CDS;gene=garL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417595.1;locus_tag=AD08_RS06055;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001058209.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 139211 140545 . - . ID=gene-AD08_RS06050;Name=AD08_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06050;old_locus_tag=AD08_3497 NZ_JHDJ01000174.1 Protein Homology CDS 139211 140545 . - 0 ID=cds-WP_000599636.1;Parent=gene-AD08_RS06050;Dbxref=Genbank:WP_000599636.1;Name=WP_000599636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312032.1;locus_tag=AD08_RS06050;product=galactarate/glucarate/glycerate transporter GarP;protein_id=WP_000599636.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 140920 142491 . + . ID=gene-AD08_RS06045;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=AD08_RS06045;old_locus_tag=AD08_3499 NZ_JHDJ01000174.1 Protein Homology CDS 140920 142491 . + 0 ID=cds-WP_001273753.1;Parent=gene-AD08_RS06045;Dbxref=Genbank:WP_001273753.1;Name=WP_001273753.1;gbkey=CDS;gene=garD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417597.1;locus_tag=AD08_RS06045;product=galactarate dehydratase;protein_id=WP_001273753.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 142640 142975 . + . ID=gene-AD08_RS06040;Name=prlF;gbkey=Gene;gene=prlF;gene_biotype=protein_coding;locus_tag=AD08_RS06040;old_locus_tag=AD08_3500 NZ_JHDJ01000174.1 Protein Homology CDS 142640 142975 . + 0 ID=cds-WP_001307405.1;Parent=gene-AD08_RS06040;Dbxref=Genbank:WP_001307405.1;Name=WP_001307405.1;gbkey=CDS;gene=prlF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417598.1;locus_tag=AD08_RS06040;product=type II toxin-antitoxin system antitoxin PrlF;protein_id=WP_001307405.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 142975 143439 . + . ID=gene-AD08_RS06035;Name=AD08_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06035;old_locus_tag=AD08_3501 NZ_JHDJ01000174.1 Protein Homology CDS 142975 143439 . + 0 ID=cds-WP_000347273.1;Parent=gene-AD08_RS06035;Dbxref=Genbank:WP_000347273.1;Name=WP_000347273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312035.1;locus_tag=AD08_RS06035;product=type II toxin-antitoxin system ribonuclease toxin YhaV;protein_id=WP_000347273.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 143494 144303 . - . ID=gene-AD08_RS06030;Name=agaR;gbkey=Gene;gene=agaR;gene_biotype=protein_coding;locus_tag=AD08_RS06030;old_locus_tag=AD08_3502 NZ_JHDJ01000174.1 Protein Homology CDS 143494 144303 . - 0 ID=cds-WP_000072187.1;Parent=gene-AD08_RS06030;Dbxref=Genbank:WP_000072187.1;Name=WP_000072187.1;gbkey=CDS;gene=agaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312036.1;locus_tag=AD08_RS06030;product=aga operon transcriptional regulator AgaR;protein_id=WP_000072187.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 144552 145832 . + . ID=gene-AD08_RS06025;Name=kbaZ;gbkey=Gene;gene=kbaZ;gene_biotype=protein_coding;locus_tag=AD08_RS06025;old_locus_tag=AD08_3503 NZ_JHDJ01000174.1 Protein Homology CDS 144552 145832 . + 0 ID=cds-WP_000681920.1;Parent=gene-AD08_RS06025;Dbxref=Genbank:WP_000681920.1;Name=WP_000681920.1;gbkey=CDS;gene=kbaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417601.1;locus_tag=AD08_RS06025;product=tagatose-bisphosphate aldolase subunit KbaZ;protein_id=WP_000681920.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 145855 146328 . + . ID=gene-AD08_RS06020;Name=AD08_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06020;old_locus_tag=AD08_3504 NZ_JHDJ01000174.1 Protein Homology CDS 145855 146328 . + 0 ID=cds-WP_001336162.1;Parent=gene-AD08_RS06020;Dbxref=Genbank:WP_001336162.1;Name=WP_001336162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417602.4;locus_tag=AD08_RS06020;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_001336162.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 146339 147118 . + . ID=gene-AD08_RS06015;Name=AD08_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06015;old_locus_tag=AD08_3505 NZ_JHDJ01000174.1 Protein Homology CDS 146339 147118 . + 0 ID=cds-WP_000406209.1;Parent=gene-AD08_RS06015;Dbxref=Genbank:WP_000406209.1;Name=WP_000406209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312039.1;locus_tag=AD08_RS06015;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000406209.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 147108 147986 . + . ID=gene-AD08_RS06010;Name=AD08_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06010;old_locus_tag=AD08_3506 NZ_JHDJ01000174.1 Protein Homology CDS 147108 147986 . + 0 ID=cds-WP_001295548.1;Parent=gene-AD08_RS06010;Dbxref=Genbank:WP_001295548.1;Name=WP_001295548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079236.1;locus_tag=AD08_RS06010;product=PTS mannose/fructose/sorbose transporter family subunit IID;protein_id=WP_001295548.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 148004 148438 . + . ID=gene-AD08_RS06005;Name=AD08_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS06005;old_locus_tag=AD08_3507 NZ_JHDJ01000174.1 Protein Homology CDS 148004 148438 . + 0 ID=cds-WP_001399423.1;Parent=gene-AD08_RS06005;Dbxref=Genbank:WP_001399423.1;Name=WP_001399423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312041.1;locus_tag=AD08_RS06005;product=PTS sugar transporter subunit IIA;protein_id=WP_001399423.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 148435 149568 . + . ID=gene-AD08_RS06000;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AD08_RS06000;old_locus_tag=AD08_3508 NZ_JHDJ01000174.1 Protein Homology CDS 148435 149568 . + 0 ID=cds-WP_032219240.1;Parent=gene-AD08_RS06000;Dbxref=Genbank:WP_032219240.1;Name=WP_032219240.1;gbkey=CDS;gene=nagA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312042.2;locus_tag=AD08_RS06000;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_032219240.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 149919 151073 . + . ID=gene-AD08_RS05995;Name=AD08_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05995;old_locus_tag=AD08_3510 NZ_JHDJ01000174.1 Protein Homology CDS 149919 151073 . + 0 ID=cds-WP_001114869.1;Parent=gene-AD08_RS05995;Dbxref=Genbank:WP_001114869.1;Name=WP_001114869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417605.1;locus_tag=AD08_RS05995;product=AgaS family sugar isomerase;protein_id=WP_001114869.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 151086 151946 . + . ID=gene-AD08_RS05990;Name=kbaY;gbkey=Gene;gene=kbaY;gene_biotype=protein_coding;locus_tag=AD08_RS05990;old_locus_tag=AD08_3511 NZ_JHDJ01000174.1 Protein Homology CDS 151086 151946 . + 0 ID=cds-WP_000022766.1;Parent=gene-AD08_RS05990;Dbxref=Genbank:WP_000022766.1;Name=WP_000022766.1;gbkey=CDS;gene=kbaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312044.1;locus_tag=AD08_RS05990;product=tagatose-bisphosphate aldolase subunit KbaY;protein_id=WP_000022766.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 152113 152589 . + . ID=gene-AD08_RS05985;Name=AD08_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05985;old_locus_tag=AD08_3512 NZ_JHDJ01000174.1 Protein Homology CDS 152113 152589 . + 0 ID=cds-WP_000203711.1;Parent=gene-AD08_RS05985;Dbxref=Genbank:WP_000203711.1;Name=WP_000203711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417607.1;locus_tag=AD08_RS05985;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_000203711.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 152628 153431 . + . ID=gene-AD08_RS05980;Name=AD08_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05980;old_locus_tag=AD08_3513 NZ_JHDJ01000174.1 Protein Homology CDS 152628 153431 . + 0 ID=cds-WP_000544489.1;Parent=gene-AD08_RS05980;Dbxref=Genbank:WP_000544489.1;Name=WP_000544489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417608.1;locus_tag=AD08_RS05980;product=PTS N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000544489.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 153421 154212 . + . ID=gene-AD08_RS05975;Name=AD08_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05975;old_locus_tag=AD08_3514 NZ_JHDJ01000174.1 Protein Homology CDS 153421 154212 . + 0 ID=cds-WP_000534347.1;Parent=gene-AD08_RS05975;Dbxref=Genbank:WP_000534347.1;Name=WP_000534347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417609.1;locus_tag=AD08_RS05975;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_000534347.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 154213 154968 . + . ID=gene-AD08_RS05970;Name=AD08_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05970;old_locus_tag=AD08_3515 NZ_JHDJ01000174.1 Protein Homology CDS 154213 154968 . + 0 ID=cds-WP_001311150.1;Parent=gene-AD08_RS05970;Dbxref=Genbank:WP_001311150.1;Name=WP_001311150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417610.1;locus_tag=AD08_RS05970;product=galactosamine-6-phosphate isomerase;protein_id=WP_001311150.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 155369 155953 . + . ID=gene-AD08_RS05965;Name=AD08_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05965;old_locus_tag=AD08_3516 NZ_JHDJ01000174.1 Protein Homology CDS 155369 155953 . + 0 ID=cds-WP_001045432.1;Parent=gene-AD08_RS05965;Dbxref=Genbank:WP_001045432.1;Name=WP_001045432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417611.1;locus_tag=AD08_RS05965;product=type 1 fimbrial protein;protein_id=WP_001045432.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 156033 156728 . + . ID=gene-AD08_RS05960;Name=AD08_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05960;old_locus_tag=AD08_3517 NZ_JHDJ01000174.1 Protein Homology CDS 156033 156728 . + 0 ID=cds-WP_032219242.1;Parent=gene-AD08_RS05960;Dbxref=Genbank:WP_032219242.1;Name=WP_032219242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417612.1;locus_tag=AD08_RS05960;product=molecular chaperone;protein_id=WP_032219242.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 156757 159273 . + . ID=gene-AD08_RS05955;Name=AD08_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05955;old_locus_tag=AD08_3518 NZ_JHDJ01000174.1 Protein Homology CDS 156757 159273 . + 0 ID=cds-WP_032219265.1;Parent=gene-AD08_RS05955;Dbxref=Genbank:WP_032219265.1;Name=WP_032219265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417613.1;locus_tag=AD08_RS05955;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_032219265.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 159284 160375 . + . ID=gene-AD08_RS05950;Name=AD08_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05950;old_locus_tag=AD08_3519 NZ_JHDJ01000174.1 Protein Homology CDS 159284 160375 . + 0 ID=cds-WP_000816992.1;Parent=gene-AD08_RS05950;Dbxref=Genbank:WP_000816992.1;Name=WP_000816992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417614.1;locus_tag=AD08_RS05950;product=fimbrial protein;protein_id=WP_000816992.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 160418 161278 . - . ID=gene-AD08_RS05945;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=AD08_RS05945;old_locus_tag=AD08_3520 NZ_JHDJ01000174.1 Protein Homology CDS 160418 161278 . - 0 ID=cds-WP_000809262.1;Parent=gene-AD08_RS05945;Dbxref=Genbank:WP_000809262.1;Name=WP_000809262.1;gbkey=CDS;gene=rsmI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312054.1;locus_tag=AD08_RS05945;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000809262.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 161343 163379 . + . ID=gene-AD08_RS05940;Name=AD08_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05940;old_locus_tag=AD08_3521 NZ_JHDJ01000174.1 Protein Homology CDS 161343 163379 . + 0 ID=cds-WP_000249104.1;Parent=gene-AD08_RS05940;Dbxref=Genbank:WP_000249104.1;Name=WP_000249104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417616.1;locus_tag=AD08_RS05940;product=penicillin-binding protein activator LpoA;protein_id=WP_000249104.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 163337 163732 . + . ID=gene-AD08_RS05935;Name=AD08_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05935;old_locus_tag=AD08_3522 NZ_JHDJ01000174.1 Protein Homology CDS 163337 163732 . + 0 ID=cds-WP_032219244.1;Parent=gene-AD08_RS05935;Dbxref=Genbank:WP_032219244.1;Name=WP_032219244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417617.1;locus_tag=AD08_RS05935;product=YraN family protein;protein_id=WP_032219244.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 163752 164342 . + . ID=gene-AD08_RS05930;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=AD08_RS05930;old_locus_tag=AD08_3523 NZ_JHDJ01000174.1 Protein Homology CDS 163752 164342 . + 0 ID=cds-WP_001158034.1;Parent=gene-AD08_RS05930;Dbxref=Genbank:WP_001158034.1;Name=WP_001158034.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312057.1;locus_tag=AD08_RS05930;product=DnaA initiator-associating protein DiaA;protein_id=WP_001158034.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 164352 164927 . + . ID=gene-AD08_RS05925;Name=yraP;gbkey=Gene;gene=yraP;gene_biotype=protein_coding;locus_tag=AD08_RS05925;old_locus_tag=AD08_3524 NZ_JHDJ01000174.1 Protein Homology CDS 164352 164927 . + 0 ID=cds-WP_000646033.1;Parent=gene-AD08_RS05925;Dbxref=Genbank:WP_000646033.1;Name=WP_000646033.1;gbkey=CDS;gene=yraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312058.1;locus_tag=AD08_RS05925;product=divisome-associated lipoprotein YraP;protein_id=WP_000646033.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 165041 166081 . - . ID=gene-AD08_RS05920;Name=AD08_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05920;old_locus_tag=AD08_3525 NZ_JHDJ01000174.1 Protein Homology CDS 165041 166081 . - 0 ID=cds-WP_000147574.1;Parent=gene-AD08_RS05920;Dbxref=Genbank:WP_000147574.1;Name=WP_000147574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417620.1;locus_tag=AD08_RS05920;product=permease;protein_id=WP_000147574.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 166154 166789 . - . ID=gene-AD08_RS05915;Name=AD08_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05915;old_locus_tag=AD08_3526 NZ_JHDJ01000174.1 Protein Homology CDS 166154 166789 . - 0 ID=cds-WP_001300423.1;Parent=gene-AD08_RS05915;Dbxref=Genbank:WP_001300423.1;Name=WP_001300423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417621.2;locus_tag=AD08_RS05915;product=NAD(P)H-binding protein;protein_id=WP_001300423.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 166917 167435 . + . ID=gene-AD08_RS05910;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=AD08_RS05910;old_locus_tag=AD08_3527 NZ_JHDJ01000174.1 Protein Homology CDS 166917 167435 . + 0 ID=cds-WP_000037608.1;Parent=gene-AD08_RS05910;Dbxref=Genbank:WP_000037608.1;Name=WP_000037608.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417622.2;locus_tag=AD08_RS05910;product=protein/nucleic acid deglycase;protein_id=WP_000037608.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 167415 167858 . - . ID=gene-AD08_RS05905;Name=AD08_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05905;old_locus_tag=AD08_3528 NZ_JHDJ01000174.1 Protein Homology CDS 167415 167858 . - 0 ID=cds-WP_000449030.1;Parent=gene-AD08_RS05905;Dbxref=Genbank:WP_000449030.1;Name=WP_000449030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417623.1;locus_tag=AD08_RS05905;product=YhbP family protein;protein_id=WP_000449030.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 167909 168211 . + . ID=gene-AD08_RS05900;Name=yhbQ;gbkey=Gene;gene=yhbQ;gene_biotype=protein_coding;locus_tag=AD08_RS05900;old_locus_tag=AD08_3529 NZ_JHDJ01000174.1 Protein Homology CDS 167909 168211 . + 0 ID=cds-WP_000189333.1;Parent=gene-AD08_RS05900;Dbxref=Genbank:WP_000189333.1;Name=WP_000189333.1;gbkey=CDS;gene=yhbQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417624.1;locus_tag=AD08_RS05900;product=DNA damage response exodeoxyribonuclease YhbQ;protein_id=WP_000189333.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 168198 168701 . - . ID=gene-AD08_RS05895;Name=AD08_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05895;old_locus_tag=AD08_3530 NZ_JHDJ01000174.1 Protein Homology CDS 168198 168701 . - 0 ID=cds-WP_000908554.1;Parent=gene-AD08_RS05895;Dbxref=Genbank:WP_000908554.1;Name=WP_000908554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312064.1;locus_tag=AD08_RS05895;product=N-acetyltransferase;protein_id=WP_000908554.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 168695 169219 . - . ID=gene-AD08_RS05890;Name=AD08_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05890;old_locus_tag=AD08_3531 NZ_JHDJ01000174.1 Protein Homology CDS 168695 169219 . - 0 ID=cds-WP_001295552.1;Parent=gene-AD08_RS05890;Dbxref=Genbank:WP_001295552.1;Name=WP_001295552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312065.1;locus_tag=AD08_RS05890;product=SCP2 domain-containing protein;protein_id=WP_001295552.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 169428 170423 . + . ID=gene-AD08_RS05885;Name=AD08_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05885;old_locus_tag=AD08_3532 NZ_JHDJ01000174.1 Protein Homology CDS 169428 170423 . + 0 ID=cds-WP_001311152.1;Parent=gene-AD08_RS05885;Dbxref=Genbank:WP_001311152.1;Name=WP_001311152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=AD08_RS05885;product=U32 family peptidase;protein_id=WP_001311152.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 170432 171310 . + . ID=gene-AD08_RS05880;Name=AD08_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05880;old_locus_tag=AD08_3533 NZ_JHDJ01000174.1 Protein Homology CDS 170432 171310 . + 0 ID=cds-WP_032219245.1;Parent=gene-AD08_RS05880;Dbxref=Genbank:WP_032219245.1;Name=WP_032219245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417628.2;locus_tag=AD08_RS05880;product=U32 family peptidase;protein_id=WP_032219245.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 171391 172398 . + . ID=gene-AD08_RS05875;Name=AD08_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05875;old_locus_tag=AD08_3534 NZ_JHDJ01000174.1 Protein Homology CDS 171391 172398 . + 0 ID=cds-WP_000130380.1;Parent=gene-AD08_RS05875;Dbxref=Genbank:WP_000130380.1;Name=WP_000130380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417629.1;locus_tag=AD08_RS05875;product=luciferase-like monooxygenase;protein_id=WP_000130380.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 172516 173760 . - . ID=gene-AD08_RS05870;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=AD08_RS05870;old_locus_tag=AD08_3535 NZ_JHDJ01000174.1 Protein Homology CDS 172516 173760 . - 0 ID=cds-WP_000224351.1;Parent=gene-AD08_RS05870;Dbxref=Genbank:WP_000224351.1;Name=WP_000224351.1;gbkey=CDS;gene=mtr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131807.1;locus_tag=AD08_RS05870;product=tryptophan permease;protein_id=WP_000224351.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 173914 175803 . - . ID=gene-AD08_RS05865;Name=AD08_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05865;old_locus_tag=AD08_3536 NZ_JHDJ01000174.1 Protein Homology CDS 173914 175803 . - 0 ID=cds-WP_001295553.1;Parent=gene-AD08_RS05865;Dbxref=Genbank:WP_001295553.1;Name=WP_001295553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417631.2;locus_tag=AD08_RS05865;product=ATP-dependent RNA helicase DeaD;protein_id=WP_001295553.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 175796 175876 . - . ID=gene-AD08_RS30735;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=AD08_RS30735 NZ_JHDJ01000174.1 Protein Homology CDS 175796 175876 . - 0 ID=cds-WP_010723222.1;Parent=gene-AD08_RS30735;Dbxref=Genbank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=AD08_RS30735;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 175983 176867 . - . ID=gene-AD08_RS05860;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=AD08_RS05860;old_locus_tag=AD08_3537 NZ_JHDJ01000174.1 Protein Homology CDS 175983 176867 . - 0 ID=cds-WP_000802080.1;Parent=gene-AD08_RS05860;Dbxref=Genbank:WP_000802080.1;Name=WP_000802080.1;gbkey=CDS;gene=nlpI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=AD08_RS05860;product=lipoprotein NlpI;protein_id=WP_000802080.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 176976 179111 . - . ID=gene-AD08_RS05855;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=AD08_RS05855;old_locus_tag=AD08_3538 NZ_JHDJ01000174.1 Protein Homology CDS 176976 179111 . - 0 ID=cds-WP_001295554.1;Parent=gene-AD08_RS05855;Dbxref=Genbank:WP_001295554.1;Name=WP_001295554.1;gbkey=CDS;gene=pnp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417633.4;locus_tag=AD08_RS05855;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001295554.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 179358 179627 . - . ID=gene-AD08_RS05850;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=AD08_RS05850;old_locus_tag=AD08_3539 NZ_JHDJ01000174.1 Protein Homology CDS 179358 179627 . - 0 ID=cds-WP_000059466.1;Parent=gene-AD08_RS05850;Dbxref=Genbank:WP_000059466.1;Name=WP_000059466.1;gbkey=CDS;gene=rpsO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=AD08_RS05850;product=30S ribosomal protein S15;protein_id=WP_000059466.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 179776 180720 . - . ID=gene-AD08_RS05845;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=AD08_RS05845;old_locus_tag=AD08_3540 NZ_JHDJ01000174.1 Protein Homology CDS 179776 180720 . - 0 ID=cds-WP_000089698.1;Parent=gene-AD08_RS05845;Dbxref=Genbank:WP_000089698.1;Name=WP_000089698.1;gbkey=CDS;gene=truB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312074.1;locus_tag=AD08_RS05845;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_000089698.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 180720 181121 . - . ID=gene-AD08_RS05840;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AD08_RS05840;old_locus_tag=AD08_3541 NZ_JHDJ01000174.1 Protein Homology CDS 180720 181121 . - 0 ID=cds-WP_001040205.1;Parent=gene-AD08_RS05840;Dbxref=Genbank:WP_001040205.1;Name=WP_001040205.1;gbkey=CDS;gene=rbfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=AD08_RS05840;product=30S ribosome-binding factor RbfA;protein_id=WP_001040205.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 181285 183957 . - . ID=gene-AD08_RS05835;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=AD08_RS05835;old_locus_tag=AD08_3542 NZ_JHDJ01000174.1 Protein Homology CDS 181285 183957 . - 0 ID=cds-WP_000133044.1;Parent=gene-AD08_RS05835;Dbxref=Genbank:WP_000133044.1;Name=WP_000133044.1;gbkey=CDS;gene=infB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312076.1;locus_tag=AD08_RS05835;product=translation initiation factor IF-2;protein_id=WP_000133044.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 183982 185469 . - . ID=gene-AD08_RS05830;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AD08_RS05830;old_locus_tag=AD08_3543 NZ_JHDJ01000174.1 Protein Homology CDS 183982 185469 . - 0 ID=cds-WP_001031057.1;Parent=gene-AD08_RS05830;Dbxref=Genbank:WP_001031057.1;Name=WP_001031057.1;gbkey=CDS;gene=nusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=AD08_RS05830;product=transcription termination/antitermination protein NusA;protein_id=WP_001031057.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 185497 185949 . - . ID=gene-AD08_RS05825;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=AD08_RS05825;old_locus_tag=AD08_3544 NZ_JHDJ01000174.1 Protein Homology CDS 185497 185949 . - 0 ID=cds-WP_001300397.1;Parent=gene-AD08_RS05825;Dbxref=Genbank:WP_001300397.1;Name=WP_001300397.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=AD08_RS05825;product=ribosome maturation factor RimP;protein_id=WP_001300397.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 186156 186232 . - . ID=gene-AD08_RS27535;Name=AD08_RS27535;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS27535;old_locus_tag=AD08_3545 NZ_JHDJ01000174.1 tRNAscan-SE tRNA 186156 186232 . - . ID=rna-AD08_RS27535;Parent=gene-AD08_RS27535;anticodon=(pos:complement(186196..186198));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS27535;product=tRNA-Met NZ_JHDJ01000174.1 tRNAscan-SE exon 186156 186232 . - . ID=exon-AD08_RS27535-1;Parent=rna-AD08_RS27535;anticodon=(pos:complement(186196..186198));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS27535;product=tRNA-Met NZ_JHDJ01000174.1 RefSeq gene 186580 187923 . + . ID=gene-AD08_RS05815;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=AD08_RS05815;old_locus_tag=AD08_3547 NZ_JHDJ01000174.1 Protein Homology CDS 186580 187923 . + 0 ID=cds-WP_000207680.1;Parent=gene-AD08_RS05815;Dbxref=Genbank:WP_000207680.1;Name=WP_000207680.1;gbkey=CDS;gene=argG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=AD08_RS05815;product=argininosuccinate synthase;protein_id=WP_000207680.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 187931 189556 . - . ID=gene-AD08_RS05810;Name=AD08_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05810;old_locus_tag=AD08_3548 NZ_JHDJ01000174.1 Protein Homology CDS 187931 189556 . - 0 ID=cds-WP_001333576.1;Parent=gene-AD08_RS05810;Dbxref=Genbank:WP_001333576.1;Name=WP_001333576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417641.4;locus_tag=AD08_RS05810;product=phosphoethanolamine transferase;protein_id=WP_001333576.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 190015 190101 . - . ID=gene-AD08_RS05805;Name=AD08_RS05805;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS05805;old_locus_tag=AD08_3549 NZ_JHDJ01000174.1 tRNAscan-SE tRNA 190015 190101 . - . ID=rna-AD08_RS05805;Parent=gene-AD08_RS05805;anticodon=(pos:complement(190065..190067));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS05805;product=tRNA-Leu NZ_JHDJ01000174.1 tRNAscan-SE exon 190015 190101 . - . ID=exon-AD08_RS05805-1;Parent=rna-AD08_RS05805;anticodon=(pos:complement(190065..190067));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS05805;product=tRNA-Leu NZ_JHDJ01000174.1 RefSeq gene 190116 190448 . - . ID=gene-AD08_RS05800;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=AD08_RS05800;old_locus_tag=AD08_3550 NZ_JHDJ01000174.1 Protein Homology CDS 190116 190448 . - 0 ID=cds-WP_001295556.1;Parent=gene-AD08_RS05800;Dbxref=Genbank:WP_001295556.1;Name=WP_001295556.1;gbkey=CDS;gene=secG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312081.1;locus_tag=AD08_RS05800;product=preprotein translocase subunit SecG;protein_id=WP_001295556.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 190676 192013 . - . ID=gene-AD08_RS05795;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AD08_RS05795;old_locus_tag=AD08_3551 NZ_JHDJ01000174.1 Protein Homology CDS 190676 192013 . - 0 ID=cds-WP_000071134.1;Parent=gene-AD08_RS05795;Dbxref=Genbank:WP_000071134.1;Name=WP_000071134.1;gbkey=CDS;gene=glmM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003905541.1;locus_tag=AD08_RS05795;product=phosphoglucosamine mutase;protein_id=WP_000071134.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 192006 192854 . - . ID=gene-AD08_RS05790;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AD08_RS05790;old_locus_tag=AD08_3552 NZ_JHDJ01000174.1 Protein Homology CDS 192006 192854 . - 0 ID=cds-WP_000764731.1;Parent=gene-AD08_RS05790;Dbxref=Genbank:WP_000764731.1;Name=WP_000764731.1;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312083.2;locus_tag=AD08_RS05790;product=dihydropteroate synthase;protein_id=WP_000764731.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 192944 194878 . - . ID=gene-AD08_RS05785;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=AD08_RS05785;old_locus_tag=AD08_3553 NZ_JHDJ01000174.1 Protein Homology CDS 192944 194878 . - 0 ID=cds-WP_001107467.1;Parent=gene-AD08_RS05785;Dbxref=Genbank:WP_001107467.1;Name=WP_001107467.1;gbkey=CDS;gene=ftsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417645.1;locus_tag=AD08_RS05785;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107467.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 194978 195607 . - . ID=gene-AD08_RS05780;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=AD08_RS05780;old_locus_tag=AD08_3554 NZ_JHDJ01000174.1 Protein Homology CDS 194978 195607 . - 0 ID=cds-WP_000145975.1;Parent=gene-AD08_RS05780;Dbxref=Genbank:WP_000145975.1;Name=WP_000145975.1;gbkey=CDS;gene=rlmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312085.1;locus_tag=AD08_RS05780;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145975.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 195733 196026 . + . ID=gene-AD08_RS05775;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=AD08_RS05775;old_locus_tag=AD08_3555 NZ_JHDJ01000174.1 Protein Homology CDS 195733 196026 . + 0 ID=cds-WP_001054420.1;Parent=gene-AD08_RS05775;Dbxref=Genbank:WP_001054420.1;Name=WP_001054420.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=AD08_RS05775;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001054420.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 196182 196658 . - . ID=gene-AD08_RS05770;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=AD08_RS05770;old_locus_tag=AD08_3556 NZ_JHDJ01000174.1 Protein Homology CDS 196182 196658 . - 0 ID=cds-WP_001148001.1;Parent=gene-AD08_RS05770;Dbxref=Genbank:WP_001148001.1;Name=WP_001148001.1;gbkey=CDS;gene=greA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=AD08_RS05770;product=transcription elongation factor GreA;protein_id=WP_001148001.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 196906 198339 . + . ID=gene-AD08_RS05765;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=AD08_RS05765;old_locus_tag=AD08_3557 NZ_JHDJ01000174.1 Protein Homology CDS 196906 198339 . + 0 ID=cds-WP_001531384.1;Parent=gene-AD08_RS05765;Dbxref=Genbank:WP_001531384.1;Name=WP_001531384.1;gbkey=CDS;gene=dacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1;locus_tag=AD08_RS05765;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001531384.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 198525 199697 . - . ID=gene-AD08_RS05760;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=AD08_RS05760;old_locus_tag=AD08_3558 NZ_JHDJ01000174.1 Protein Homology CDS 198525 199697 . - 0 ID=cds-WP_000673575.1;Parent=gene-AD08_RS05760;Dbxref=Genbank:WP_000673575.1;Name=WP_000673575.1;gbkey=CDS;gene=cgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417650.1;locus_tag=AD08_RS05760;product=Obg family GTPase CgtA;protein_id=WP_000673575.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 199713 200678 . - . ID=gene-AD08_RS05755;Name=AD08_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05755;old_locus_tag=AD08_3559 NZ_JHDJ01000174.1 Protein Homology CDS 199713 200678 . - 0 ID=cds-WP_000813037.1;Parent=gene-AD08_RS05755;Dbxref=Genbank:WP_000813037.1;Name=WP_000813037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=AD08_RS05755;product=DMT family transporter;protein_id=WP_000813037.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 200805 201062 . - . ID=gene-AD08_RS05750;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AD08_RS05750;old_locus_tag=AD08_3560 NZ_JHDJ01000174.1 Protein Homology CDS 200805 201062 . - 0 ID=cds-WP_000940595.1;Parent=gene-AD08_RS05750;Dbxref=Genbank:WP_000940595.1;Name=WP_000940595.1;gbkey=CDS;gene=rpmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007369914.1;locus_tag=AD08_RS05750;product=50S ribosomal protein L27;protein_id=WP_000940595.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 201083 201394 . - . ID=gene-AD08_RS05745;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AD08_RS05745;old_locus_tag=AD08_3561 NZ_JHDJ01000174.1 Protein Homology CDS 201083 201394 . - 0 ID=cds-WP_000271401.1;Parent=gene-AD08_RS05745;Dbxref=Genbank:WP_000271401.1;Name=WP_000271401.1;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=AD08_RS05745;product=50S ribosomal protein L21;protein_id=WP_000271401.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 201653 202624 . + . ID=gene-AD08_RS05740;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=AD08_RS05740;old_locus_tag=AD08_3562 NZ_JHDJ01000174.1 Protein Homology CDS 201653 202624 . + 0 ID=cds-WP_001047336.1;Parent=gene-AD08_RS05740;Dbxref=Genbank:WP_001047336.1;Name=WP_001047336.1;gbkey=CDS;gene=ispB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417654.1;locus_tag=AD08_RS05740;product=octaprenyl diphosphate synthase;protein_id=WP_001047336.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 202852 203130 . + . ID=gene-AD08_RS05735;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=AD08_RS05735;old_locus_tag=AD08_3563 NZ_JHDJ01000174.1 Protein Homology CDS 202852 203130 . + 0 ID=cds-WP_000445413.1;Parent=gene-AD08_RS05735;Dbxref=Genbank:WP_000445413.1;Name=WP_000445413.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417655.1;locus_tag=AD08_RS05735;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000445413.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 203178 204437 . - . ID=gene-AD08_RS05730;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=AD08_RS05730;old_locus_tag=AD08_3564 NZ_JHDJ01000174.1 Protein Homology CDS 203178 204437 . - 0 ID=cds-WP_000357259.1;Parent=gene-AD08_RS05730;Dbxref=Genbank:WP_000357259.1;Name=WP_000357259.1;gbkey=CDS;gene=murA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417656.1;locus_tag=AD08_RS05730;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357259.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 204492 204746 . - . ID=gene-AD08_RS05725;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=AD08_RS05725;old_locus_tag=AD08_3565 NZ_JHDJ01000174.1 Protein Homology CDS 204492 204746 . - 0 ID=cds-WP_000429656.1;Parent=gene-AD08_RS05725;Dbxref=Genbank:WP_000429656.1;Name=WP_000429656.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585657.1;locus_tag=AD08_RS05725;product=BolA family iron metabolism protein IbaG;protein_id=WP_000429656.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 204906 205199 . - . ID=gene-AD08_RS05720;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=AD08_RS05720;old_locus_tag=AD08_3566 NZ_JHDJ01000174.1 Protein Homology CDS 204906 205199 . - 0 ID=cds-WP_000004488.1;Parent=gene-AD08_RS05720;Dbxref=Genbank:WP_000004488.1;Name=WP_000004488.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312097.2;locus_tag=AD08_RS05720;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000004488.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 205199 205834 . - . ID=gene-AD08_RS05715;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=AD08_RS05715;old_locus_tag=AD08_3567 NZ_JHDJ01000174.1 Protein Homology CDS 205199 205834 . - 0 ID=cds-WP_000476487.1;Parent=gene-AD08_RS05715;Dbxref=Genbank:WP_000476487.1;Name=WP_000476487.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417659.1;locus_tag=AD08_RS05715;product=phospholipid-binding protein MlaC;protein_id=WP_000476487.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 205853 206404 . - . ID=gene-AD08_RS05710;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=AD08_RS05710;old_locus_tag=AD08_3568 NZ_JHDJ01000174.1 Protein Homology CDS 205853 206404 . - 0 ID=cds-WP_001296448.1;Parent=gene-AD08_RS05710;Dbxref=Genbank:WP_001296448.1;Name=WP_001296448.1;gbkey=CDS;gene=mlaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312099.1;locus_tag=AD08_RS05710;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001296448.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 206409 207191 . - . ID=gene-AD08_RS05705;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=AD08_RS05705;old_locus_tag=AD08_3569 NZ_JHDJ01000174.1 Protein Homology CDS 206409 207191 . - 0 ID=cds-WP_000925795.1;Parent=gene-AD08_RS05705;Dbxref=Genbank:WP_000925795.1;Name=WP_000925795.1;gbkey=CDS;gene=mlaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=AD08_RS05705;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925795.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 207199 208008 . - . ID=gene-AD08_RS05700;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=AD08_RS05700;old_locus_tag=AD08_3570 NZ_JHDJ01000174.1 Protein Homology CDS 207199 208008 . - 0 ID=cds-WP_000438245.1;Parent=gene-AD08_RS05700;Dbxref=Genbank:WP_000438245.1;Name=WP_000438245.1;gbkey=CDS;gene=mlaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312101.1;locus_tag=AD08_RS05700;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000438245.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 208218 209195 . + . ID=gene-AD08_RS05695;Name=AD08_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05695;old_locus_tag=AD08_3571 NZ_JHDJ01000174.1 Protein Homology CDS 208218 209195 . + 0 ID=cds-WP_000922901.1;Parent=gene-AD08_RS05695;Dbxref=Genbank:WP_000922901.1;Name=WP_000922901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417663.1;locus_tag=AD08_RS05695;product=calcium/sodium antiporter;protein_id=WP_000922901.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 209209 210195 . + . ID=gene-AD08_RS05690;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=AD08_RS05690;old_locus_tag=AD08_3572 NZ_JHDJ01000174.1 Protein Homology CDS 209209 210195 . + 0 ID=cds-WP_001295557.1;Parent=gene-AD08_RS05690;Dbxref=Genbank:WP_001295557.1;Name=WP_001295557.1;gbkey=CDS;gene=kdsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417664.1;locus_tag=AD08_RS05690;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_001295557.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 210216 210782 . + . ID=gene-AD08_RS05685;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=AD08_RS05685;old_locus_tag=AD08_3573 NZ_JHDJ01000174.1 Protein Homology CDS 210216 210782 . + 0 ID=cds-WP_000030005.1;Parent=gene-AD08_RS05685;Dbxref=Genbank:WP_000030005.1;Name=WP_000030005.1;gbkey=CDS;gene=kdsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312104.1;locus_tag=AD08_RS05685;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030005.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 210779 211354 . + . ID=gene-AD08_RS05680;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=AD08_RS05680;old_locus_tag=AD08_3574 NZ_JHDJ01000174.1 Protein Homology CDS 210779 211354 . + 0 ID=cds-WP_000030537.1;Parent=gene-AD08_RS05680;Dbxref=Genbank:WP_000030537.1;Name=WP_000030537.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312105.1;locus_tag=AD08_RS05680;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000030537.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 211323 211880 . + . ID=gene-AD08_RS05675;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=AD08_RS05675;old_locus_tag=AD08_3575 NZ_JHDJ01000174.1 Protein Homology CDS 211323 211880 . + 0 ID=cds-WP_000669785.1;Parent=gene-AD08_RS05675;Dbxref=Genbank:WP_000669785.1;Name=WP_000669785.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312106.1;locus_tag=AD08_RS05675;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669785.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 211887 212612 . + . ID=gene-AD08_RS05670;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=AD08_RS05670;old_locus_tag=AD08_3576 NZ_JHDJ01000174.1 Protein Homology CDS 211887 212612 . + 0 ID=cds-WP_000224099.1;Parent=gene-AD08_RS05670;Dbxref=Genbank:WP_000224099.1;Name=WP_000224099.1;gbkey=CDS;gene=lptB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091254.1;locus_tag=AD08_RS05670;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224099.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 212660 214093 . + . ID=gene-AD08_RS05665;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=AD08_RS05665;old_locus_tag=AD08_3577 NZ_JHDJ01000174.1 Protein Homology CDS 212660 214093 . + 0 ID=cds-WP_000809057.1;Parent=gene-AD08_RS05665;Dbxref=Genbank:WP_000809057.1;Name=WP_000809057.1;gbkey=CDS;gene=rpoN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417669.1;locus_tag=AD08_RS05665;product=RNA polymerase factor sigma-54;protein_id=WP_000809057.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 214116 214403 . + . ID=gene-AD08_RS05660;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=AD08_RS05660;old_locus_tag=AD08_3578 NZ_JHDJ01000174.1 Protein Homology CDS 214116 214403 . + 0 ID=cds-WP_001176599.1;Parent=gene-AD08_RS05660;Dbxref=Genbank:WP_001176599.1;Name=WP_001176599.1;gbkey=CDS;gene=hpf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007369896.1;locus_tag=AD08_RS05660;product=ribosome hibernation promoting factor;protein_id=WP_001176599.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 214521 215012 . + . ID=gene-AD08_RS05655;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=AD08_RS05655;old_locus_tag=AD08_3579 NZ_JHDJ01000174.1 Protein Homology CDS 214521 215012 . + 0 ID=cds-WP_000183676.1;Parent=gene-AD08_RS05655;Dbxref=Genbank:WP_000183676.1;Name=WP_000183676.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417671.1;locus_tag=AD08_RS05655;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000183676.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 215058 215912 . + . ID=gene-AD08_RS05650;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=AD08_RS05650;old_locus_tag=AD08_3580 NZ_JHDJ01000174.1 Protein Homology CDS 215058 215912 . + 0 ID=cds-WP_000243741.1;Parent=gene-AD08_RS05650;Dbxref=Genbank:WP_000243741.1;Name=WP_000243741.1;gbkey=CDS;gene=rapZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312111.1;locus_tag=AD08_RS05650;product=RNase adapter RapZ;protein_id=WP_000243741.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 215909 216181 . + . ID=gene-AD08_RS0126705;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=AD08_RS0126705 NZ_JHDJ01000174.1 Protein Homology CDS 215909 216181 . + 0 ID=cds-WP_000216791.1;Parent=gene-AD08_RS0126705;Dbxref=Genbank:WP_000216791.1;Name=WP_000216791.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=AD08_RS0126705;product=PTS phosphocarrier protein NPr;protein_id=WP_000216791.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 216395 217027 . + . ID=gene-AD08_RS05645;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=AD08_RS05645;old_locus_tag=AD08_3582 NZ_JHDJ01000174.1 Protein Homology CDS 216395 217027 . + 0 ID=cds-WP_000620405.1;Parent=gene-AD08_RS05645;Dbxref=Genbank:WP_000620405.1;Name=WP_000620405.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417674.1;locus_tag=AD08_RS05645;product=PhoP regulatory network protein YrbL;protein_id=WP_000620405.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 217024 217752 . - . ID=gene-AD08_RS05640;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=AD08_RS05640;old_locus_tag=AD08_3583 NZ_JHDJ01000174.1 Protein Homology CDS 217024 217752 . - 0 ID=cds-WP_000047091.1;Parent=gene-AD08_RS05640;Dbxref=Genbank:WP_000047091.1;Name=WP_000047091.1;gbkey=CDS;gene=mtgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417675.1;locus_tag=AD08_RS05640;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000047091.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 217749 218402 . - . ID=gene-AD08_RS05635;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=AD08_RS05635;old_locus_tag=AD08_3584 NZ_JHDJ01000174.1 Protein Homology CDS 217749 218402 . - 0 ID=cds-WP_001300411.1;Parent=gene-AD08_RS05635;Dbxref=Genbank:WP_001300411.1;Name=WP_001300411.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709007.2;locus_tag=AD08_RS05635;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_001300411.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 218632 220968 . - . ID=gene-AD08_RS05630;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=AD08_RS05630;old_locus_tag=AD08_3585 NZ_JHDJ01000174.1 Protein Homology CDS 218632 220968 . - 0 ID=cds-WP_001364218.1;Parent=gene-AD08_RS05630;Dbxref=Genbank:WP_001364218.1;Name=WP_001364218.1;gbkey=CDS;gene=arcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709008.1;locus_tag=AD08_RS05630;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_001364218.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 221064 221993 . - . ID=gene-AD08_RS05625;Name=AD08_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05625;old_locus_tag=AD08_3586 NZ_JHDJ01000174.1 Protein Homology CDS 221064 221993 . - 0 ID=cds-WP_001299745.1;Parent=gene-AD08_RS05625;Dbxref=Genbank:WP_001299745.1;Name=WP_001299745.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312117.1;locus_tag=AD08_RS05625;product=TIGR01212 family radical SAM protein;protein_id=WP_001299745.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 222668 227128 . + . ID=gene-AD08_RS05620;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=AD08_RS05620;old_locus_tag=AD08_3587 NZ_JHDJ01000174.1 Protein Homology CDS 222668 227128 . + 0 ID=cds-WP_032219266.1;Parent=gene-AD08_RS05620;Dbxref=Genbank:WP_032219266.1;Name=WP_032219266.1;gbkey=CDS;gene=gltB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=AD08_RS05620;product=glutamate synthase large subunit;protein_id=WP_032219266.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 227141 228559 . + . ID=gene-AD08_RS05615;Name=AD08_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05615;old_locus_tag=AD08_3588 NZ_JHDJ01000174.1 Protein Homology CDS 227141 228559 . + 0 ID=cds-WP_000081674.1;Parent=gene-AD08_RS05615;Dbxref=Genbank:WP_000081674.1;Name=WP_000081674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=AD08_RS05615;product=glutamate synthase subunit GltD;protein_id=WP_000081674.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 229121 229885 . + . ID=gene-AD08_RS05610;Name=AD08_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05610;old_locus_tag=AD08_3590 NZ_JHDJ01000174.1 Protein Homology CDS 229121 229885 . + 0 ID=cds-WP_000465371.1;Parent=gene-AD08_RS05610;Dbxref=Genbank:WP_000465371.1;Name=WP_000465371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417681.1;locus_tag=AD08_RS05610;product=DUF1120 domain-containing protein;protein_id=WP_000465371.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 230057 230731 . + . ID=gene-AD08_RS05605;Name=AD08_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05605;old_locus_tag=AD08_3591 NZ_JHDJ01000174.1 Protein Homology CDS 230057 230731 . + 0 ID=cds-WP_032219249.1;Parent=gene-AD08_RS05605;Dbxref=Genbank:WP_032219249.1;Name=WP_032219249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417682.1;locus_tag=AD08_RS05605;product=fimbria/pilus periplasmic chaperone;protein_id=WP_032219249.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 230752 233133 . + . ID=gene-AD08_RS05600;Name=AD08_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05600;old_locus_tag=AD08_3592 NZ_JHDJ01000174.1 Protein Homology CDS 230752 233133 . + 0 ID=cds-WP_001741058.1;Parent=gene-AD08_RS05600;Dbxref=Genbank:WP_001741058.1;Name=WP_001741058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417683.1;locus_tag=AD08_RS05600;product=fimbrial biogenesis usher protein;protein_id=WP_001741058.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 233130 233675 . + . ID=gene-AD08_RS05595;Name=AD08_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05595;old_locus_tag=AD08_3593 NZ_JHDJ01000174.1 Protein Homology CDS 233130 233675 . + 0 ID=cds-WP_000821351.1;Parent=gene-AD08_RS05595;Dbxref=Genbank:WP_000821351.1;Name=WP_000821351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000821351.1;locus_tag=AD08_RS05595;product=hypothetical protein;protein_id=WP_000821351.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 233672 234388 . + . ID=gene-AD08_RS05590;Name=AD08_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05590;old_locus_tag=AD08_3594 NZ_JHDJ01000174.1 Protein Homology CDS 233672 234388 . + 0 ID=cds-WP_001067008.1;Parent=gene-AD08_RS05590;Dbxref=Genbank:WP_001067008.1;Name=WP_001067008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417686.1;locus_tag=AD08_RS05590;product=DUF1120 domain-containing protein;protein_id=WP_001067008.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq pseudogene 234573 235699 . + . ID=gene-AD08_RS0126710;Name=AD08_RS0126710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0126710;pseudo=true NZ_JHDJ01000174.1 Protein Homology CDS 234573 235699 . + 0 ID=cds-AD08_RS0126710;Parent=gene-AD08_RS0126710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417687.1;locus_tag=AD08_RS0126710;product=DUF1016 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 235759 236223 . - . ID=gene-AD08_RS05585;Name=AD08_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05585;old_locus_tag=AD08_3597 NZ_JHDJ01000174.1 Protein Homology CDS 235759 236223 . - 0 ID=cds-WP_000979882.1;Parent=gene-AD08_RS05585;Dbxref=Genbank:WP_000979882.1;Name=WP_000979882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417688.1;locus_tag=AD08_RS05585;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000979882.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 236220 237095 . - . ID=gene-AD08_RS05580;Name=AD08_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05580;old_locus_tag=AD08_3598 NZ_JHDJ01000174.1 Protein Homology CDS 236220 237095 . - 0 ID=cds-WP_000209011.1;Parent=gene-AD08_RS05580;Dbxref=Genbank:WP_000209011.1;Name=WP_000209011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417689.4;locus_tag=AD08_RS05580;product=N-acetylmannosamine kinase;protein_id=WP_000209011.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 237092 237781 . - . ID=gene-AD08_RS05575;Name=AD08_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05575;old_locus_tag=AD08_3599 NZ_JHDJ01000174.1 Protein Homology CDS 237092 237781 . - 0 ID=cds-WP_001331661.1;Parent=gene-AD08_RS05575;Dbxref=Genbank:WP_001331661.1;Name=WP_001331661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417690.1;locus_tag=AD08_RS05575;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_001331661.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 237829 239319 . - . ID=gene-AD08_RS05570;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=AD08_RS05570;old_locus_tag=AD08_3600 NZ_JHDJ01000174.1 Protein Homology CDS 237829 239319 . - 0 ID=cds-WP_000108459.1;Parent=gene-AD08_RS05570;Dbxref=Genbank:WP_000108459.1;Name=WP_000108459.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312124.2;locus_tag=AD08_RS05570;product=sialic acid transporter NanT;protein_id=WP_000108459.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 239428 240321 . - . ID=gene-AD08_RS05565;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=AD08_RS05565;old_locus_tag=AD08_3601 NZ_JHDJ01000174.1 Protein Homology CDS 239428 240321 . - 0 ID=cds-WP_000224714.1;Parent=gene-AD08_RS05565;Dbxref=Genbank:WP_000224714.1;Name=WP_000224714.1;gbkey=CDS;gene=nanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312125.1;locus_tag=AD08_RS05565;product=N-acetylneuraminate lyase;protein_id=WP_000224714.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 240443 241234 . - . ID=gene-AD08_RS05560;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=AD08_RS05560;old_locus_tag=AD08_3602 NZ_JHDJ01000174.1 Protein Homology CDS 240443 241234 . - 0 ID=cds-WP_000523845.1;Parent=gene-AD08_RS05560;Dbxref=Genbank:WP_000523845.1;Name=WP_000523845.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417693.3;locus_tag=AD08_RS05560;product=transcriptional regulator NanR;protein_id=WP_000523845.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 241614 242981 . + . ID=gene-AD08_RS05555;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AD08_RS05555;old_locus_tag=AD08_3603 NZ_JHDJ01000174.1 Protein Homology CDS 241614 242981 . + 0 ID=cds-WP_000467018.1;Parent=gene-AD08_RS05555;Dbxref=Genbank:WP_000467018.1;Name=WP_000467018.1;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417694.1;locus_tag=AD08_RS05555;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000467018.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 243024 243521 . - . ID=gene-AD08_RS05550;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=AD08_RS05550;old_locus_tag=AD08_3604 NZ_JHDJ01000174.1 Protein Homology CDS 243024 243521 . - 0 ID=cds-WP_000366129.1;Parent=gene-AD08_RS05550;Dbxref=Genbank:WP_000366129.1;Name=WP_000366129.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312128.1;locus_tag=AD08_RS05550;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366129.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 243527 244165 . - . ID=gene-AD08_RS05545;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=AD08_RS05545;old_locus_tag=AD08_3605 NZ_JHDJ01000174.1 Protein Homology CDS 243527 244165 . - 0 ID=cds-WP_000257293.1;Parent=gene-AD08_RS05545;Dbxref=Genbank:WP_000257293.1;Name=WP_000257293.1;gbkey=CDS;gene=sspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312129.1;locus_tag=AD08_RS05545;product=stringent starvation protein A;protein_id=WP_000257293.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 244560 244952 . - . ID=gene-AD08_RS05540;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=AD08_RS05540;old_locus_tag=AD08_3606 NZ_JHDJ01000174.1 Protein Homology CDS 244560 244952 . - 0 ID=cds-WP_000829818.1;Parent=gene-AD08_RS05540;Dbxref=Genbank:WP_000829818.1;Name=WP_000829818.1;gbkey=CDS;gene=rpsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=AD08_RS05540;product=30S ribosomal protein S9;protein_id=WP_000829818.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 244968 245396 . - . ID=gene-AD08_RS05535;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=AD08_RS05535;old_locus_tag=AD08_3607 NZ_JHDJ01000174.1 Protein Homology CDS 244968 245396 . - 0 ID=cds-WP_000847559.1;Parent=gene-AD08_RS05535;Dbxref=Genbank:WP_000847559.1;Name=WP_000847559.1;gbkey=CDS;gene=rplM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312131.1;locus_tag=AD08_RS05535;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 245615 246742 . - . ID=gene-AD08_RS05530;Name=AD08_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05530;old_locus_tag=AD08_3608 NZ_JHDJ01000174.1 Protein Homology CDS 245615 246742 . - 0 ID=cds-WP_001192332.1;Parent=gene-AD08_RS05530;Dbxref=Genbank:WP_001192332.1;Name=WP_001192332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312132.1;locus_tag=AD08_RS05530;product=cell division protein ZapE;protein_id=WP_001192332.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 246936 247334 . + . ID=gene-AD08_RS05525;Name=AD08_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05525;old_locus_tag=AD08_3609 NZ_JHDJ01000174.1 Protein Homology CDS 246936 247334 . + 0 ID=cds-WP_001295270.1;Parent=gene-AD08_RS05525;Dbxref=Genbank:WP_001295270.1;Name=WP_001295270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=AD08_RS05525;product=DUF1043 family protein;protein_id=WP_001295270.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 247488 248855 . + . ID=gene-AD08_RS05520;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=AD08_RS05520;old_locus_tag=AD08_3610 NZ_JHDJ01000174.1 Protein Homology CDS 247488 248855 . + 0 ID=cds-WP_001295271.1;Parent=gene-AD08_RS05520;Dbxref=Genbank:WP_001295271.1;Name=WP_001295271.1;gbkey=CDS;gene=degQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417701.1;locus_tag=AD08_RS05520;product=serine endoprotease DegQ;protein_id=WP_001295271.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 248945 250012 . + . ID=gene-AD08_RS05515;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=AD08_RS05515;old_locus_tag=AD08_3611 NZ_JHDJ01000174.1 Protein Homology CDS 248945 250012 . + 0 ID=cds-WP_000497723.1;Parent=gene-AD08_RS05515;Dbxref=Genbank:WP_000497723.1;Name=WP_000497723.1;gbkey=CDS;gene=degS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312135.1;locus_tag=AD08_RS05515;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497723.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 250075 251013 . - . ID=gene-AD08_RS05510;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=AD08_RS05510;old_locus_tag=AD08_3612 NZ_JHDJ01000174.1 Protein Homology CDS 250075 251013 . - 0 ID=cds-WP_001295272.1;Parent=gene-AD08_RS05510;Dbxref=Genbank:WP_001295272.1;Name=WP_001295272.1;gbkey=CDS;gene=mdh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=AD08_RS05510;product=malate dehydrogenase;protein_id=WP_001295272.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 251448 251918 . + . ID=gene-AD08_RS05505;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=AD08_RS05505;old_locus_tag=AD08_3613 NZ_JHDJ01000174.1 Protein Homology CDS 251448 251918 . + 0 ID=cds-WP_001257846.1;Parent=gene-AD08_RS05505;Dbxref=Genbank:WP_001257846.1;Name=WP_001257846.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=AD08_RS05505;product=transcriptional regulator ArgR;protein_id=WP_001257846.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 252283 252546 . + . ID=gene-AD08_RS05500;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=AD08_RS05500;old_locus_tag=AD08_3614 NZ_JHDJ01000174.1 Protein Homology CDS 252283 252546 . + 0 ID=cds-WP_000695690.1;Parent=gene-AD08_RS05500;Dbxref=Genbank:WP_000695690.1;Name=WP_000695690.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417705.2;locus_tag=AD08_RS05500;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695690.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 252602 252874 . - . ID=gene-AD08_RS05495;Name=AD08_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05495;old_locus_tag=AD08_3615 NZ_JHDJ01000174.1 Protein Homology CDS 252602 252874 . - 0 ID=cds-WP_032219253.1;Parent=gene-AD08_RS05495;Dbxref=Genbank:WP_032219253.1;Name=WP_032219253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312139.1;locus_tag=AD08_RS05495;product=hypothetical protein;protein_id=WP_032219253.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 252966 254933 . - . ID=gene-AD08_RS05490;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=AD08_RS05490;old_locus_tag=AD08_3616 NZ_JHDJ01000174.1 Protein Homology CDS 252966 254933 . - 0 ID=cds-WP_000510966.1;Parent=gene-AD08_RS05490;Dbxref=Genbank:WP_000510966.1;Name=WP_000510966.1;gbkey=CDS;gene=aaeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417707.1;locus_tag=AD08_RS05490;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510966.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 254939 255871 . - . ID=gene-AD08_RS05485;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=AD08_RS05485;old_locus_tag=AD08_3617 NZ_JHDJ01000174.1 Protein Homology CDS 254939 255871 . - 0 ID=cds-WP_000854021.1;Parent=gene-AD08_RS05485;Dbxref=Genbank:WP_000854021.1;Name=WP_000854021.1;gbkey=CDS;gene=aaeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417708.1;locus_tag=AD08_RS05485;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000854021.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 255879 256082 . - . ID=gene-AD08_RS05480;Name=AD08_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05480;old_locus_tag=AD08_3618 NZ_JHDJ01000174.1 Protein Homology CDS 255879 256082 . - 0 ID=cds-WP_000051841.1;Parent=gene-AD08_RS05480;Dbxref=Genbank:WP_000051841.1;Name=WP_000051841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=AD08_RS05480;product=AaeX family protein;protein_id=WP_000051841.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 256265 257194 . + . ID=gene-AD08_RS05475;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=AD08_RS05475;old_locus_tag=AD08_3619 NZ_JHDJ01000174.1 Protein Homology CDS 256265 257194 . + 0 ID=cds-WP_001545490.1;Parent=gene-AD08_RS05475;Dbxref=Genbank:WP_001545490.1;Name=WP_001545490.1;gbkey=CDS;gene=aaeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312143.1;locus_tag=AD08_RS05475;product=HTH-type transcriptional activator AaeR;protein_id=WP_001545490.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 257328 258773 . - . ID=gene-AD08_RS05470;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=AD08_RS05470;old_locus_tag=AD08_3620 NZ_JHDJ01000174.1 Protein Homology CDS 257328 258773 . - 0 ID=cds-WP_000055909.1-2;Parent=gene-AD08_RS05470;Dbxref=Genbank:WP_000055909.1;Name=WP_000055909.1;gbkey=CDS;gene=tldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417711.1;locus_tag=AD08_RS05470;product=metalloprotease TldD;protein_id=WP_000055909.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 259476 263276 . - . ID=gene-AD08_RS05465;Name=AD08_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05465;old_locus_tag=AD08_3621 NZ_JHDJ01000174.1 Protein Homology CDS 259476 263276 . - 0 ID=cds-WP_032219256.1;Parent=gene-AD08_RS05465;Dbxref=Genbank:WP_032219256.1;Name=WP_032219256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026208.1;locus_tag=AD08_RS05465;product=AsmA2 domain-containing protein;protein_id=WP_032219256.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 263344 264813 . - . ID=gene-AD08_RS05460;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=AD08_RS05460;old_locus_tag=AD08_3622 NZ_JHDJ01000174.1 Protein Homology CDS 263344 264813 . - 0 ID=cds-WP_032219258.1;Parent=gene-AD08_RS05460;Dbxref=Genbank:WP_032219258.1;Name=WP_032219258.1;gbkey=CDS;gene=rng;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312146.1;locus_tag=AD08_RS05460;product=ribonuclease G;protein_id=WP_032219258.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 264803 265396 . - . ID=gene-AD08_RS05455;Name=yhdE;gbkey=Gene;gene=yhdE;gene_biotype=protein_coding;locus_tag=AD08_RS05455;old_locus_tag=AD08_3623 NZ_JHDJ01000174.1 Protein Homology CDS 264803 265396 . - 0 ID=cds-WP_000203105.1;Parent=gene-AD08_RS05455;Dbxref=Genbank:WP_000203105.1;Name=WP_000203105.1;gbkey=CDS;gene=yhdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417714.1;locus_tag=AD08_RS05455;product=nucleoside triphosphate pyrophosphatase YhdE;protein_id=WP_000203105.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 265405 265893 . - . ID=gene-AD08_RS05450;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=AD08_RS05450;old_locus_tag=AD08_3624 NZ_JHDJ01000174.1 Protein Homology CDS 265405 265893 . - 0 ID=cds-WP_000179409.1;Parent=gene-AD08_RS05450;Dbxref=Genbank:WP_000179409.1;Name=WP_000179409.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=AD08_RS05450;product=rod shape-determining protein MreD;protein_id=WP_000179409.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 265893 266996 . - . ID=gene-AD08_RS05445;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=AD08_RS05445;old_locus_tag=AD08_3625 NZ_JHDJ01000174.1 Protein Homology CDS 265893 266996 . - 0 ID=cds-WP_000802511.1;Parent=gene-AD08_RS05445;Dbxref=Genbank:WP_000802511.1;Name=WP_000802511.1;gbkey=CDS;gene=mreC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417716.1;locus_tag=AD08_RS05445;product=rod shape-determining protein MreC;protein_id=WP_000802511.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 267062 268105 . - . ID=gene-AD08_RS05440;Name=AD08_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05440;old_locus_tag=AD08_3626 NZ_JHDJ01000174.1 Protein Homology CDS 267062 268105 . - 0 ID=cds-WP_000913396.1;Parent=gene-AD08_RS05440;Dbxref=Genbank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=AD08_RS05440;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 268410 270350 . - . ID=gene-AD08_RS05435;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=AD08_RS05435;old_locus_tag=AD08_3627 NZ_JHDJ01000174.1 Protein Homology CDS 268410 270350 . - 0 ID=cds-WP_001241469.1;Parent=gene-AD08_RS05435;Dbxref=Genbank:WP_001241469.1;Name=WP_001241469.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417718.1;locus_tag=AD08_RS05435;product=RNase E specificity factor CsrD;protein_id=WP_001241469.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 270502 271476 . + . ID=gene-AD08_RS05430;Name=AD08_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05430;old_locus_tag=AD08_3628 NZ_JHDJ01000174.1 Protein Homology CDS 270502 271476 . + 0 ID=cds-WP_032219259.1;Parent=gene-AD08_RS05430;Dbxref=Genbank:WP_032219259.1;Name=WP_032219259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417719.1;locus_tag=AD08_RS05430;product=oxidoreductase;protein_id=WP_032219259.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 272454 272924 . + . ID=gene-AD08_RS05420;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;gene_synonym=fabE;locus_tag=AD08_RS05420;old_locus_tag=AD08_3632 NZ_JHDJ01000174.1 Protein Homology CDS 272454 272924 . + 0 ID=cds-WP_000354622.1;Parent=gene-AD08_RS05420;Dbxref=Genbank:WP_000354622.1;Name=WP_000354622.1;gbkey=CDS;gene=accB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312154.1;locus_tag=AD08_RS05420;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354622.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 272935 274284 . + . ID=gene-AD08_RS05415;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=AD08_RS05415;old_locus_tag=AD08_3633 NZ_JHDJ01000174.1 Protein Homology CDS 272935 274284 . + 0 ID=cds-WP_000884639.1;Parent=gene-AD08_RS05415;Dbxref=Genbank:WP_000884639.1;Name=WP_000884639.1;gbkey=CDS;gene=accC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=AD08_RS05415;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884639.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 274393 274635 . + . ID=gene-AD08_RS05410;Name=AD08_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05410;old_locus_tag=AD08_3634 NZ_JHDJ01000174.1 Protein Homology CDS 274393 274635 . + 0 ID=cds-WP_000381173.1;Parent=gene-AD08_RS05410;Dbxref=Genbank:WP_000381173.1;Name=WP_000381173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417723.1;locus_tag=AD08_RS05410;product=YhdT family protein;protein_id=WP_000381173.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 274625 276076 . + . ID=gene-AD08_RS05405;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=AD08_RS05405;old_locus_tag=AD08_3635 NZ_JHDJ01000174.1 Protein Homology CDS 274625 276076 . + 0 ID=cds-WP_001175728.1;Parent=gene-AD08_RS05405;Dbxref=Genbank:WP_001175728.1;Name=WP_001175728.1;gbkey=CDS;gene=panF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312157.2;locus_tag=AD08_RS05405;product=sodium/pantothenate symporter;protein_id=WP_001175728.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 276088 276969 . + . ID=gene-AD08_RS05400;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=AD08_RS05400;old_locus_tag=AD08_3636 NZ_JHDJ01000174.1 Protein Homology CDS 276088 276969 . + 0 ID=cds-WP_001145827.1;Parent=gene-AD08_RS05400;Dbxref=Genbank:WP_001145827.1;Name=WP_001145827.1;gbkey=CDS;gene=prmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312158.1;locus_tag=AD08_RS05400;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145827.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 277298 278263 . + . ID=gene-AD08_RS05395;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=AD08_RS05395;old_locus_tag=AD08_3637 NZ_JHDJ01000174.1 Protein Homology CDS 277298 278263 . + 0 ID=cds-WP_001219652.1;Parent=gene-AD08_RS05395;Dbxref=Genbank:WP_001219652.1;Name=WP_001219652.1;gbkey=CDS;gene=dusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=AD08_RS05395;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219652.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 278289 278585 . + . ID=gene-AD08_RS05390;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=AD08_RS05390;old_locus_tag=AD08_3638 NZ_JHDJ01000174.1 Protein Homology CDS 278289 278585 . + 0 ID=cds-WP_000462905.1;Parent=gene-AD08_RS05390;Dbxref=Genbank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=AD08_RS05390;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 278671 279555 . + . ID=gene-AD08_RS05385;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=AD08_RS05385;old_locus_tag=AD08_3639 NZ_JHDJ01000174.1 Protein Homology CDS 278671 279555 . + 0 ID=cds-WP_032219261.1;Parent=gene-AD08_RS05385;Dbxref=Genbank:WP_032219261.1;Name=WP_032219261.1;gbkey=CDS;gene=yhdJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417728.4;locus_tag=AD08_RS05385;product=adenine-specific DNA-methyltransferase;protein_id=WP_032219261.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 279639 279818 . + . ID=gene-AD08_RS0126730;Name=AD08_RS0126730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126730 NZ_JHDJ01000174.1 Protein Homology CDS 279639 279818 . + 0 ID=cds-WP_001295275.1;Parent=gene-AD08_RS0126730;Dbxref=Genbank:WP_001295275.1;Name=WP_001295275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312162.1;locus_tag=AD08_RS0126730;product=DUF2556 family protein;protein_id=WP_001295275.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 279821 280483 . - . ID=gene-AD08_RS0126735;Name=acrS;gbkey=Gene;gene=acrS;gene_biotype=protein_coding;locus_tag=AD08_RS0126735 NZ_JHDJ01000174.1 Protein Homology CDS 279821 280483 . - 0 ID=cds-WP_001129518.1;Parent=gene-AD08_RS0126735;Dbxref=Genbank:WP_001129518.1;Name=WP_001129518.1;gbkey=CDS;gene=acrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312163.1;locus_tag=AD08_RS0126735;product=multidrug efflux transporter transcriptional repressor AcrS;protein_id=WP_001129518.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 280882 282039 . + . ID=gene-AD08_RS05380;Name=acrE;gbkey=Gene;gene=acrE;gene_biotype=protein_coding;locus_tag=AD08_RS05380;old_locus_tag=AD08_3643 NZ_JHDJ01000174.1 Protein Homology CDS 280882 282039 . + 0 ID=cds-WP_001466418.1;Parent=gene-AD08_RS05380;Dbxref=Genbank:WP_001466418.1;Name=WP_001466418.1;gbkey=CDS;gene=acrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417731.1;locus_tag=AD08_RS05380;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrE;protein_id=WP_001466418.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq pseudogene 282051 285154 . + . ID=gene-AD08_RS05375;Name=acrF;gbkey=Gene;gene=acrF;gene_biotype=pseudogene;locus_tag=AD08_RS05375;old_locus_tag=AD08_3644;pseudo=true NZ_JHDJ01000174.1 Protein Homology CDS 282051 285154 . + 0 ID=cds-AD08_RS05375;Parent=gene-AD08_RS05375;Note=frameshifted;gbkey=CDS;gene=acrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417732.1;locus_tag=AD08_RS05375;product=multidrug efflux RND transporter permease subunit AcrF;pseudo=true;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 285407 285628 . + . ID=gene-AD08_RS05370;Name=AD08_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05370;old_locus_tag=AD08_3646 NZ_JHDJ01000174.1 Protein Homology CDS 285407 285628 . + 0 ID=cds-WP_032219263.1;Parent=gene-AD08_RS05370;Dbxref=Genbank:WP_032219263.1;Name=WP_032219263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312167.1;locus_tag=AD08_RS05370;product=hypothetical protein;protein_id=WP_032219263.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 286059 287084 . + . ID=gene-AD08_RS05365;Name=AD08_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05365;old_locus_tag=AD08_3647 NZ_JHDJ01000174.1 Protein Homology CDS 286059 287084 . + 0 ID=cds-WP_000738568.1;Parent=gene-AD08_RS05365;Dbxref=Genbank:WP_000738568.1;Name=WP_000738568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312168.2;locus_tag=AD08_RS05365;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_000738568.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 287152 288333 . + . ID=gene-AD08_RS05360;Name=AD08_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05360;old_locus_tag=AD08_3648 NZ_JHDJ01000174.1 Protein Homology CDS 287152 288333 . + 0 ID=cds-WP_000019655.1;Parent=gene-AD08_RS05360;Dbxref=Genbank:WP_000019655.1;Name=WP_000019655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026209.1;locus_tag=AD08_RS05360;product=amino acid ABC transporter permease;protein_id=WP_000019655.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 288343 289446 . + . ID=gene-AD08_RS05355;Name=AD08_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05355;old_locus_tag=AD08_3649 NZ_JHDJ01000174.1 Protein Homology CDS 288343 289446 . + 0 ID=cds-WP_001300681.1;Parent=gene-AD08_RS05355;Dbxref=Genbank:WP_001300681.1;Name=WP_001300681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417736.2;locus_tag=AD08_RS05355;product=amino acid ABC transporter permease;protein_id=WP_001300681.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 289454 290212 . + . ID=gene-AD08_RS05350;Name=AD08_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05350;old_locus_tag=AD08_3650 NZ_JHDJ01000174.1 Protein Homology CDS 289454 290212 . + 0 ID=cds-WP_000078349.1;Parent=gene-AD08_RS05350;Dbxref=Genbank:WP_000078349.1;Name=WP_000078349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417737.1;locus_tag=AD08_RS05350;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000078349.1;transl_table=11 NZ_JHDJ01000174.1 RefSeq gene 290443 290558 . - . ID=gene-AD08_RS05345;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD08_RS05345;old_locus_tag=AD08_3651 NZ_JHDJ01000174.1 cmsearch rRNA 290443 290558 . - . ID=rna-AD08_RS05345;Parent=gene-AD08_RS05345;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS05345;product=5S ribosomal RNA NZ_JHDJ01000174.1 cmsearch exon 290443 290558 . - . ID=exon-AD08_RS05345-1;Parent=rna-AD08_RS05345;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS05345;product=5S ribosomal RNA NZ_JHDJ01000174.1 RefSeq gene 290598 290673 . - . ID=gene-AD08_RS05340;Name=AD08_RS05340;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS05340;old_locus_tag=AD08_3652 NZ_JHDJ01000174.1 tRNAscan-SE tRNA 290598 290673 . - . ID=rna-AD08_RS05340;Parent=gene-AD08_RS05340;anticodon=(pos:complement(290638..290640));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS05340;product=tRNA-Thr NZ_JHDJ01000174.1 tRNAscan-SE exon 290598 290673 . - . ID=exon-AD08_RS05340-1;Parent=rna-AD08_RS05340;anticodon=(pos:complement(290638..290640));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS05340;product=tRNA-Thr NZ_JHDJ01000174.1 RefSeq gene 290688 290803 . - . ID=gene-AD08_RS05335;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD08_RS05335;old_locus_tag=AD08_3653 NZ_JHDJ01000174.1 cmsearch rRNA 290688 290803 . - . ID=rna-AD08_RS05335;Parent=gene-AD08_RS05335;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS05335;product=5S ribosomal RNA NZ_JHDJ01000174.1 cmsearch exon 290688 290803 . - . ID=exon-AD08_RS05335-1;Parent=rna-AD08_RS05335;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS05335;product=5S ribosomal RNA NZ_JHDJ01000174.1 RefSeq gene 290843 290918 . - . ID=gene-AD08_RS05330;Name=AD08_RS05330;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS05330;old_locus_tag=AD08_3654 NZ_JHDJ01000174.1 tRNAscan-SE tRNA 290843 290918 . - . ID=rna-AD08_RS05330;Parent=gene-AD08_RS05330;anticodon=(pos:complement(290883..290885));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS05330;product=tRNA-Thr NZ_JHDJ01000174.1 tRNAscan-SE exon 290843 290918 . - . ID=exon-AD08_RS05330-1;Parent=rna-AD08_RS05330;anticodon=(pos:complement(290883..290885));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS05330;product=tRNA-Thr NZ_JHDJ01000174.1 RefSeq gene 290933 291048 . - . ID=gene-AD08_RS05325;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD08_RS05325;old_locus_tag=AD08_3655 NZ_JHDJ01000174.1 cmsearch rRNA 290933 291048 . - . ID=rna-AD08_RS05325;Parent=gene-AD08_RS05325;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS05325;product=5S ribosomal RNA NZ_JHDJ01000174.1 cmsearch exon 290933 291048 . - . ID=exon-AD08_RS05325-1;Parent=rna-AD08_RS05325;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS05325;product=5S ribosomal RNA NZ_JHDJ01000174.1 RefSeq gene 291126 292148 . - . ID=gene-AD08_RS0126745;Name=AD08_RS0126745;end_range=292148,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS0126745;partial=true NZ_JHDJ01000174.1 RefSeq rRNA 291126 292148 . - . ID=rna-AD08_RS0126745;Parent=gene-AD08_RS0126745;end_range=292148,.;gbkey=rRNA;locus_tag=AD08_RS0126745;partial=true;product=23S ribosomal RNA NZ_JHDJ01000174.1 RefSeq exon 291126 292148 . - . ID=exon-AD08_RS0126745-1;Parent=rna-AD08_RS0126745;end_range=292148,.;gbkey=rRNA;locus_tag=AD08_RS0126745;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JHDJ01000175.1 1 2184 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000175.1 RefSeq region 1 2184 . + . ID=NZ_JHDJ01000175.1:1..2184;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000175.1 RefSeq gene 1 70 . - . ID=gene-AD08_RS0126765;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD08_RS0126765;partial=true;start_range=.,1 NZ_JHDJ01000175.1 cmsearch rRNA 1 70 . - . ID=rna-AD08_RS0126765;Parent=gene-AD08_RS0126765;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS0126765;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JHDJ01000175.1 cmsearch exon 1 70 . - . ID=exon-AD08_RS0126765-1;Parent=rna-AD08_RS0126765;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS0126765;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JHDJ01000175.1 RefSeq gene 148 2184 . - . ID=gene-AD08_RS05320;Name=AD08_RS05320;end_range=2184,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS05320;old_locus_tag=AD08_3660;partial=true NZ_JHDJ01000175.1 RefSeq rRNA 148 2184 . - . ID=rna-AD08_RS05320;Parent=gene-AD08_RS05320;end_range=2184,.;gbkey=rRNA;locus_tag=AD08_RS05320;partial=true;product=23S ribosomal RNA NZ_JHDJ01000175.1 RefSeq exon 148 2184 . - . ID=exon-AD08_RS05320-1;Parent=rna-AD08_RS05320;end_range=2184,.;gbkey=rRNA;locus_tag=AD08_RS05320;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JHDJ01000176.1 1 161124 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000176.1 RefSeq region 1 161124 . + . ID=NZ_JHDJ01000176.1:1..161124;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000176.1 RefSeq gene 41 4264 . - . ID=gene-AD08_RS05315;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=AD08_RS05315;old_locus_tag=AD08_3662 NZ_JHDJ01000176.1 Protein Homology CDS 41 4264 . - 0 ID=cds-WP_000653944.1;Parent=gene-AD08_RS05315;Dbxref=Genbank:WP_000653944.1;Name=WP_000653944.1;gbkey=CDS;gene=rpoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312938.1;locus_tag=AD08_RS05315;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653944.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 4341 8369 . - . ID=gene-AD08_RS05310;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AD08_RS05310;old_locus_tag=AD08_3663 NZ_JHDJ01000176.1 Protein Homology CDS 4341 8369 . - 0 ID=cds-WP_000263098.1;Parent=gene-AD08_RS05310;Dbxref=Genbank:WP_000263098.1;Name=WP_000263098.1;gbkey=CDS;gene=rpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312937.1;locus_tag=AD08_RS05310;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263098.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 8689 9054 . - . ID=gene-AD08_RS05305;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AD08_RS05305;old_locus_tag=AD08_3664 NZ_JHDJ01000176.1 Protein Homology CDS 8689 9054 . - 0 ID=cds-WP_000028878.1;Parent=gene-AD08_RS05305;Dbxref=Genbank:WP_000028878.1;Name=WP_000028878.1;gbkey=CDS;gene=rplL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=AD08_RS05305;product=50S ribosomal protein L7/L12;protein_id=WP_000028878.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 9121 9618 . - . ID=gene-AD08_RS05300;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AD08_RS05300;old_locus_tag=AD08_3665 NZ_JHDJ01000176.1 Protein Homology CDS 9121 9618 . - 0 ID=cds-WP_001207201.1;Parent=gene-AD08_RS05300;Dbxref=Genbank:WP_001207201.1;Name=WP_001207201.1;gbkey=CDS;gene=rplJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=AD08_RS05300;product=50S ribosomal protein L10;protein_id=WP_001207201.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 10031 10735 . - . ID=gene-AD08_RS05295;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=AD08_RS05295;old_locus_tag=AD08_3666 NZ_JHDJ01000176.1 Protein Homology CDS 10031 10735 . - 0 ID=cds-WP_001096684.1;Parent=gene-AD08_RS05295;Dbxref=Genbank:WP_001096684.1;Name=WP_001096684.1;gbkey=CDS;gene=rplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312934.1;locus_tag=AD08_RS05295;product=50S ribosomal protein L1;protein_id=WP_001096684.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 10739 11167 . - . ID=gene-AD08_RS05290;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=AD08_RS05290;old_locus_tag=AD08_3667 NZ_JHDJ01000176.1 Protein Homology CDS 10739 11167 . - 0 ID=cds-WP_001085926.1;Parent=gene-AD08_RS05290;Dbxref=Genbank:WP_001085926.1;Name=WP_001085926.1;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=AD08_RS05290;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 11326 11871 . - . ID=gene-AD08_RS05285;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AD08_RS05285;old_locus_tag=AD08_3668 NZ_JHDJ01000176.1 Protein Homology CDS 11326 11871 . - 0 ID=cds-WP_001287516.1;Parent=gene-AD08_RS05285;Dbxref=Genbank:WP_001287516.1;Name=WP_001287516.1;gbkey=CDS;gene=nusG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=AD08_RS05285;product=transcription termination/antitermination protein NusG;protein_id=WP_001287516.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 11873 12256 . - . ID=gene-AD08_RS05280;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=AD08_RS05280;old_locus_tag=AD08_3669 NZ_JHDJ01000176.1 Protein Homology CDS 11873 12256 . - 0 ID=cds-WP_001275702.1;Parent=gene-AD08_RS05280;Dbxref=Genbank:WP_001275702.1;Name=WP_001275702.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=AD08_RS05280;product=preprotein translocase subunit SecE;protein_id=WP_001275702.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 12486 13670 . - . ID=gene-AD08_RS05275;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=AD08_RS05275;old_locus_tag=AD08_3670 NZ_JHDJ01000176.1 Protein Homology CDS 12486 13670 . - 0 ID=cds-WP_000031784.1;Parent=gene-AD08_RS05275;Dbxref=Genbank:WP_000031784.1;Name=WP_000031784.1;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312930.1;locus_tag=AD08_RS05275;product=elongation factor Tu;protein_id=WP_000031784.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 13741 15855 . - . ID=gene-AD08_RS05270;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AD08_RS05270;old_locus_tag=AD08_3671 NZ_JHDJ01000176.1 Protein Homology CDS 13741 15855 . - 0 ID=cds-WP_000124700.1;Parent=gene-AD08_RS05270;Dbxref=Genbank:WP_000124700.1;Name=WP_000124700.1;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=AD08_RS05270;product=elongation factor G;protein_id=WP_000124700.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 15952 16422 . - . ID=gene-AD08_RS05265;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=AD08_RS05265;old_locus_tag=AD08_3672 NZ_JHDJ01000176.1 Protein Homology CDS 15952 16422 . - 0 ID=cds-WP_001138043.1;Parent=gene-AD08_RS05265;Dbxref=Genbank:WP_001138043.1;Name=WP_001138043.1;gbkey=CDS;gene=rpsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006714698.1;locus_tag=AD08_RS05265;product=30S ribosomal protein S7;protein_id=WP_001138043.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 16519 16893 . - . ID=gene-AD08_RS05260;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=AD08_RS05260;old_locus_tag=AD08_3673 NZ_JHDJ01000176.1 Protein Homology CDS 16519 16893 . - 0 ID=cds-WP_000246815.1;Parent=gene-AD08_RS05260;Dbxref=Genbank:WP_000246815.1;Name=WP_000246815.1;gbkey=CDS;gene=rpsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852912.1;locus_tag=AD08_RS05260;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 17019 17306 . - . ID=gene-AD08_RS05255;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=AD08_RS05255;old_locus_tag=AD08_3674 NZ_JHDJ01000176.1 Protein Homology CDS 17019 17306 . - 0 ID=cds-WP_000903373.1;Parent=gene-AD08_RS05255;Dbxref=Genbank:WP_000903373.1;Name=WP_000903373.1;gbkey=CDS;gene=tusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417802.1;locus_tag=AD08_RS05255;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903373.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 17314 17673 . - . ID=gene-AD08_RS05250;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=AD08_RS05250;old_locus_tag=AD08_3675 NZ_JHDJ01000176.1 Protein Homology CDS 17314 17673 . - 0 ID=cds-WP_000820714.1;Parent=gene-AD08_RS05250;Dbxref=Genbank:WP_000820714.1;Name=WP_000820714.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417803.1;locus_tag=AD08_RS05250;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820714.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 17673 18059 . - . ID=gene-AD08_RS05245;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=AD08_RS05245;old_locus_tag=AD08_3676 NZ_JHDJ01000176.1 Protein Homology CDS 17673 18059 . - 0 ID=cds-WP_001209680.1;Parent=gene-AD08_RS05245;Dbxref=Genbank:WP_001209680.1;Name=WP_001209680.1;gbkey=CDS;gene=tusD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417804.1;locus_tag=AD08_RS05245;product=sulfurtransferase complex subunit TusD;protein_id=WP_001209680.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 18059 18781 . - . ID=gene-AD08_RS05240;Name=AD08_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05240;old_locus_tag=AD08_3677 NZ_JHDJ01000176.1 Protein Homology CDS 18059 18781 . - 0 ID=cds-WP_000091466.1;Parent=gene-AD08_RS05240;Dbxref=Genbank:WP_000091466.1;Name=WP_000091466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709120.2;locus_tag=AD08_RS05240;product=transcriptional regulator;protein_id=WP_000091466.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 18948 19760 . - . ID=gene-AD08_RS05235;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=AD08_RS05235;old_locus_tag=AD08_3678 NZ_JHDJ01000176.1 Protein Homology CDS 18948 19760 . - 0 ID=cds-WP_032219271.1;Parent=gene-AD08_RS05235;Dbxref=Genbank:WP_032219271.1;Name=WP_032219271.1;gbkey=CDS;gene=fkpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003827768.1;locus_tag=AD08_RS05235;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_032219271.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 19981 20199 . + . ID=gene-AD08_RS05230;Name=AD08_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05230;old_locus_tag=AD08_3679 NZ_JHDJ01000176.1 Protein Homology CDS 19981 20199 . + 0 ID=cds-WP_001153615.1;Parent=gene-AD08_RS05230;Dbxref=Genbank:WP_001153615.1;Name=WP_001153615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312226.1;locus_tag=AD08_RS05230;product=protein SlyX;protein_id=WP_001153615.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 20248 20838 . - . ID=gene-AD08_RS05225;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=AD08_RS05225;old_locus_tag=AD08_3680 NZ_JHDJ01000176.1 Protein Homology CDS 20248 20838 . - 0 ID=cds-WP_000861334.1;Parent=gene-AD08_RS05225;Dbxref=Genbank:WP_000861334.1;Name=WP_000861334.1;gbkey=CDS;gene=slyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312227.1;locus_tag=AD08_RS05225;product=peptidylprolyl isomerase;protein_id=WP_000861334.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 20933 21133 . - . ID=gene-AD08_RS05220;Name=AD08_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05220;old_locus_tag=AD08_3681 NZ_JHDJ01000176.1 Protein Homology CDS 20933 21133 . - 0 ID=cds-WP_001007730.1;Parent=gene-AD08_RS05220;Dbxref=Genbank:WP_001007730.1;Name=WP_001007730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588468.1;locus_tag=AD08_RS05220;product=YheV family putative metal-binding protein;protein_id=WP_001007730.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 21143 22948 . - . ID=gene-AD08_RS05215;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=AD08_RS05215;old_locus_tag=AD08_3682 NZ_JHDJ01000176.1 Protein Homology CDS 21143 22948 . - 0 ID=cds-WP_001469429.1;Parent=gene-AD08_RS05215;Dbxref=Genbank:WP_001469429.1;Name=WP_001469429.1;gbkey=CDS;gene=kefB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417809.1;locus_tag=AD08_RS05215;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_001469429.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 22948 23499 . - . ID=gene-AD08_RS05210;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=AD08_RS05210;old_locus_tag=AD08_3683 NZ_JHDJ01000176.1 Protein Homology CDS 22948 23499 . - 0 ID=cds-WP_001384304.1;Parent=gene-AD08_RS05210;Dbxref=Genbank:WP_001384304.1;Name=WP_001384304.1;gbkey=CDS;gene=kefG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312229.2;locus_tag=AD08_RS05210;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_001384304.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 23630 25543 . + . ID=gene-AD08_RS05205;Name=AD08_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05205;old_locus_tag=AD08_3684 NZ_JHDJ01000176.1 Protein Homology CDS 23630 25543 . + 0 ID=cds-WP_000634798.1;Parent=gene-AD08_RS05205;Dbxref=Genbank:WP_000634798.1;Name=WP_000634798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312230.1;locus_tag=AD08_RS05205;product=ABC transporter ATP-binding protein;protein_id=WP_000634798.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 25543 26565 . + . ID=gene-AD08_RS05200;Name=AD08_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05200;old_locus_tag=AD08_3685 NZ_JHDJ01000176.1 Protein Homology CDS 25543 26565 . + 0 ID=cds-WP_000057356.1;Parent=gene-AD08_RS05200;Dbxref=Genbank:WP_000057356.1;Name=WP_000057356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417812.1;locus_tag=AD08_RS05200;product=hydrolase;protein_id=WP_000057356.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 26559 26777 . + . ID=gene-AD08_RS05195;Name=AD08_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05195;old_locus_tag=AD08_3686 NZ_JHDJ01000176.1 Protein Homology CDS 26559 26777 . + 0 ID=cds-WP_000907085.1;Parent=gene-AD08_RS05195;Dbxref=Genbank:WP_000907085.1;Name=WP_000907085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=AD08_RS05195;product=YheU family protein;protein_id=WP_000907085.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 26831 27700 . + . ID=gene-AD08_RS05190;Name=AD08_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05190;old_locus_tag=AD08_3687 NZ_JHDJ01000176.1 Protein Homology CDS 26831 27700 . + 0 ID=cds-WP_001274680.1;Parent=gene-AD08_RS05190;Dbxref=Genbank:WP_001274680.1;Name=WP_001274680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417814.1;locus_tag=AD08_RS05190;product=phosphoribulokinase;protein_id=WP_001274680.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 27755 28159 . - . ID=gene-AD08_RS05185;Name=AD08_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05185;old_locus_tag=AD08_3688 NZ_JHDJ01000176.1 Protein Homology CDS 27755 28159 . - 0 ID=cds-WP_001148908.1;Parent=gene-AD08_RS05185;Dbxref=Genbank:WP_001148908.1;Name=WP_001148908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312234.1;locus_tag=AD08_RS05185;product=OsmC family protein;protein_id=WP_001148908.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 28461 29093 . + . ID=gene-AD08_RS05180;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=AD08_RS05180;old_locus_tag=AD08_3689 NZ_JHDJ01000176.1 Protein Homology CDS 28461 29093 . + 0 ID=cds-WP_000242755.1;Parent=gene-AD08_RS05180;Dbxref=Genbank:WP_000242755.1;Name=WP_000242755.1;gbkey=CDS;gene=crp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312235.1;locus_tag=AD08_RS05180;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242755.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 29144 31234 . + . ID=gene-AD08_RS05175;Name=AD08_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05175;old_locus_tag=AD08_3690 NZ_JHDJ01000176.1 Protein Homology CDS 29144 31234 . + 0 ID=cds-WP_001295162.1;Parent=gene-AD08_RS05175;Dbxref=Genbank:WP_001295162.1;Name=WP_001295162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=AD08_RS05175;product=membrane protein;protein_id=WP_001295162.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 31301 32521 . - . ID=gene-AD08_RS05170;Name=argD/dapC;gbkey=Gene;gene=argD/dapC;gene_biotype=protein_coding;locus_tag=AD08_RS05170;old_locus_tag=AD08_3691 NZ_JHDJ01000176.1 Protein Homology CDS 31301 32521 . - 0 ID=cds-WP_000963792.1;Parent=gene-AD08_RS05170;Dbxref=Genbank:WP_000963792.1;Name=WP_000963792.1;gbkey=CDS;gene=argD/dapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417818.1;locus_tag=AD08_RS05170;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000963792.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 32607 33170 . - . ID=gene-AD08_RS05165;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=AD08_RS05165;old_locus_tag=AD08_3692 NZ_JHDJ01000176.1 Protein Homology CDS 32607 33170 . - 0 ID=cds-WP_032219273.1;Parent=gene-AD08_RS05165;Dbxref=Genbank:WP_032219273.1;Name=WP_032219273.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417819.1;locus_tag=AD08_RS05165;product=aminodeoxychorismate synthase component 2;protein_id=WP_032219273.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 33202 33804 . - . ID=gene-AD08_RS05160;Name=AD08_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05160;old_locus_tag=AD08_3693 NZ_JHDJ01000176.1 Protein Homology CDS 33202 33804 . - 0 ID=cds-WP_032219275.1;Parent=gene-AD08_RS05160;Dbxref=Genbank:WP_032219275.1;Name=WP_032219275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417820.1;locus_tag=AD08_RS05160;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_032219275.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 33794 33961 . - . ID=gene-AD08_RS0126775;Name=AD08_RS0126775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126775 NZ_JHDJ01000176.1 Protein Homology CDS 33794 33961 . - 0 ID=cds-WP_000736862.1;Parent=gene-AD08_RS0126775;Dbxref=Genbank:WP_000736862.1;Name=WP_000736862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312240.1;locus_tag=AD08_RS0126775;product=YhfG family protein;protein_id=WP_000736862.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 34066 34638 . - . ID=gene-AD08_RS05155;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=AD08_RS05155;old_locus_tag=AD08_3694 NZ_JHDJ01000176.1 Protein Homology CDS 34066 34638 . - 0 ID=cds-WP_000477225.1;Parent=gene-AD08_RS05155;Dbxref=Genbank:WP_000477225.1;Name=WP_000477225.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920493.1;locus_tag=AD08_RS05155;product=peptidylprolyl isomerase A;protein_id=WP_000477225.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 34909 36090 . + . ID=gene-AD08_RS05150;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=AD08_RS05150;old_locus_tag=AD08_3696 NZ_JHDJ01000176.1 Protein Homology CDS 34909 36090 . + 0 ID=cds-WP_000185247.1;Parent=gene-AD08_RS05150;Dbxref=Genbank:WP_000185247.1;Name=WP_000185247.1;gbkey=CDS;gene=tsgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417823.1;locus_tag=AD08_RS05150;product=MFS transporter TsgA;protein_id=WP_000185247.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 36352 38895 . + . ID=gene-AD08_RS05145;Name=AD08_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05145;old_locus_tag=AD08_3698 NZ_JHDJ01000176.1 Protein Homology CDS 36352 38895 . + 0 ID=cds-WP_000049208.1;Parent=gene-AD08_RS05145;Dbxref=Genbank:WP_000049208.1;Name=WP_000049208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417824.1;locus_tag=AD08_RS05145;product=NADPH-nitrite reductase large subunit;protein_id=WP_000049208.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 38892 39218 . + . ID=gene-AD08_RS05140;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=AD08_RS05140;old_locus_tag=AD08_3699 NZ_JHDJ01000176.1 Protein Homology CDS 38892 39218 . + 0 ID=cds-WP_032219276.1;Parent=gene-AD08_RS05140;Dbxref=Genbank:WP_032219276.1;Name=WP_032219276.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312244.1;locus_tag=AD08_RS05140;product=nitrite reductase small subunit NirD;protein_id=WP_032219276.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 39344 40150 . + . ID=gene-AD08_RS05135;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=AD08_RS05135;old_locus_tag=AD08_3700 NZ_JHDJ01000176.1 Protein Homology CDS 39344 40150 . + 0 ID=cds-WP_000493556.1;Parent=gene-AD08_RS05135;Dbxref=Genbank:WP_000493556.1;Name=WP_000493556.1;gbkey=CDS;gene=nirC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026212.2;locus_tag=AD08_RS05135;product=nitrite transporter NirC;protein_id=WP_000493556.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 40169 41542 . + . ID=gene-AD08_RS05130;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=AD08_RS05130;old_locus_tag=AD08_3701 NZ_JHDJ01000176.1 Protein Homology CDS 40169 41542 . + 0 ID=cds-WP_000349855.1;Parent=gene-AD08_RS05130;Dbxref=Genbank:WP_000349855.1;Name=WP_000349855.1;gbkey=CDS;gene=cobA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312246.1;locus_tag=AD08_RS05130;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000349855.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 41789 41956 . + . ID=gene-AD08_RS05125;Name=AD08_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05125;old_locus_tag=AD08_3702 NZ_JHDJ01000176.1 Protein Homology CDS 41789 41956 . + 0 ID=cds-WP_001031834.1;Parent=gene-AD08_RS05125;Dbxref=Genbank:WP_001031834.1;Name=WP_001031834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312247.1;locus_tag=AD08_RS05125;product=YhfL family protein;protein_id=WP_001031834.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 42200 43588 . + . ID=gene-AD08_RS05120;Name=frlA;gbkey=Gene;gene=frlA;gene_biotype=protein_coding;locus_tag=AD08_RS05120;old_locus_tag=AD08_3703 NZ_JHDJ01000176.1 Protein Homology CDS 42200 43588 . + 0 ID=cds-WP_001311175.1;Parent=gene-AD08_RS05120;Dbxref=Genbank:WP_001311175.1;Name=WP_001311175.1;gbkey=CDS;gene=frlA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001324580.1;locus_tag=AD08_RS05120;product=fructoselysine/psicoselysine transporter;protein_id=WP_001311175.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 43609 44631 . + . ID=gene-AD08_RS05115;Name=frlB;gbkey=Gene;gene=frlB;gene_biotype=protein_coding;locus_tag=AD08_RS05115;old_locus_tag=AD08_3704 NZ_JHDJ01000176.1 Protein Homology CDS 43609 44631 . + 0 ID=cds-WP_001295163.1;Parent=gene-AD08_RS05115;Dbxref=Genbank:WP_001295163.1;Name=WP_001295163.1;gbkey=CDS;gene=frlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417830.4;locus_tag=AD08_RS05115;product=fructoselysine 6-phosphate deglycase;protein_id=WP_001295163.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 44681 45511 . + . ID=gene-AD08_RS05110;Name=frlC;gbkey=Gene;gene=frlC;gene_biotype=protein_coding;locus_tag=AD08_RS05110;old_locus_tag=AD08_3705 NZ_JHDJ01000176.1 Protein Homology CDS 44681 45511 . + 0 ID=cds-WP_000847837.1;Parent=gene-AD08_RS05110;Dbxref=Genbank:WP_000847837.1;Name=WP_000847837.1;gbkey=CDS;gene=frlC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026213.1;locus_tag=AD08_RS05110;product=fructoselysine 3-epimerase;protein_id=WP_000847837.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 45508 46293 . + . ID=gene-AD08_RS05105;Name=frlD;gbkey=Gene;gene=frlD;gene_biotype=protein_coding;locus_tag=AD08_RS05105;old_locus_tag=AD08_3706 NZ_JHDJ01000176.1 Protein Homology CDS 45508 46293 . + 0 ID=cds-WP_032219278.1;Parent=gene-AD08_RS05105;Dbxref=Genbank:WP_032219278.1;Name=WP_032219278.1;gbkey=CDS;gene=frlD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417833.1;locus_tag=AD08_RS05105;product=fructoselysine 6-kinase;protein_id=WP_032219278.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 46393 47124 . + . ID=gene-AD08_RS05100;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=AD08_RS05100;old_locus_tag=AD08_3707 NZ_JHDJ01000176.1 Protein Homology CDS 46393 47124 . + 0 ID=cds-WP_001276847.1;Parent=gene-AD08_RS05100;Dbxref=Genbank:WP_001276847.1;Name=WP_001276847.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417834.6;locus_tag=AD08_RS05100;product=transcriptional regulator PhoB;protein_id=WP_001276847.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 47276 48361 . - . ID=gene-AD08_RS05095;Name=AD08_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05095;old_locus_tag=AD08_3708 NZ_JHDJ01000176.1 Protein Homology CDS 47276 48361 . - 0 ID=cds-WP_001392700.1;Parent=gene-AD08_RS05095;Dbxref=Genbank:WP_001392700.1;Name=WP_001392700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417835.1;locus_tag=AD08_RS05095;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_001392700.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 48373 49677 . - . ID=gene-AD08_RS05090;Name=AD08_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05090;old_locus_tag=AD08_3709 NZ_JHDJ01000176.1 Protein Homology CDS 48373 49677 . - 0 ID=cds-WP_000366862.1;Parent=gene-AD08_RS05090;Dbxref=Genbank:WP_000366862.1;Name=WP_000366862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417836.1;locus_tag=AD08_RS05090;product=membrane protein;protein_id=WP_000366862.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 49689 50042 . - . ID=gene-AD08_RS05085;Name=AD08_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05085;old_locus_tag=AD08_3710 NZ_JHDJ01000176.1 Protein Homology CDS 49689 50042 . - 0 ID=cds-WP_000719728.1;Parent=gene-AD08_RS05085;Dbxref=Genbank:WP_000719728.1;Name=WP_000719728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417837.2;locus_tag=AD08_RS05085;product=DUF2620 domain-containing protein;protein_id=WP_000719728.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 50053 50931 . - . ID=gene-AD08_RS05080;Name=AD08_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05080;old_locus_tag=AD08_3711 NZ_JHDJ01000176.1 Protein Homology CDS 50053 50931 . - 0 ID=cds-WP_000007012.1;Parent=gene-AD08_RS05080;Dbxref=Genbank:WP_000007012.1;Name=WP_000007012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417838.1;locus_tag=AD08_RS05080;product=phosphotriesterase-related protein;protein_id=WP_000007012.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 50928 52154 . - . ID=gene-AD08_RS05075;Name=AD08_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05075;old_locus_tag=AD08_3712 NZ_JHDJ01000176.1 Protein Homology CDS 50928 52154 . - 0 ID=cds-WP_000090611.1;Parent=gene-AD08_RS05075;Dbxref=Genbank:WP_000090611.1;Name=WP_000090611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417839.1;locus_tag=AD08_RS05075;product=phosphopentomutase;protein_id=WP_000090611.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 52154 53317 . - . ID=gene-AD08_RS05070;Name=AD08_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05070;old_locus_tag=AD08_3713 NZ_JHDJ01000176.1 Protein Homology CDS 52154 53317 . - 0 ID=cds-WP_032219281.1;Parent=gene-AD08_RS05070;Dbxref=Genbank:WP_032219281.1;Name=WP_032219281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417840.1;locus_tag=AD08_RS05070;product=YhfX family PLP-dependent enzyme;protein_id=WP_032219281.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 53401 53763 . - . ID=gene-AD08_RS05065;Name=AD08_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05065;old_locus_tag=AD08_3714 NZ_JHDJ01000176.1 Protein Homology CDS 53401 53763 . - 0 ID=cds-WP_001295165.1;Parent=gene-AD08_RS05065;Dbxref=Genbank:WP_001295165.1;Name=WP_001295165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417841.2;locus_tag=AD08_RS05065;product=PRD domain protein;protein_id=WP_001295165.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 53780 54685 . - . ID=gene-AD08_RS05060;Name=AD08_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05060;old_locus_tag=AD08_3715 NZ_JHDJ01000176.1 Protein Homology CDS 53780 54685 . - 0 ID=cds-WP_032219284.1;Parent=gene-AD08_RS05060;Dbxref=Genbank:WP_032219284.1;Name=WP_032219284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026214.1;locus_tag=AD08_RS05060;product=hypothetical protein;protein_id=WP_032219284.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 54975 55979 . - . ID=gene-AD08_RS05055;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=AD08_RS05055;old_locus_tag=AD08_3716 NZ_JHDJ01000176.1 Protein Homology CDS 54975 55979 . - 0 ID=cds-WP_000165552.1;Parent=gene-AD08_RS05055;Dbxref=Genbank:WP_000165552.1;Name=WP_000165552.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417843.1;locus_tag=AD08_RS05055;product=tryptophan--tRNA ligase;protein_id=WP_000165552.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 55972 56730 . - . ID=gene-AD08_RS05050;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=AD08_RS05050;old_locus_tag=AD08_3717 NZ_JHDJ01000176.1 Protein Homology CDS 55972 56730 . - 0 ID=cds-WP_001031729.1;Parent=gene-AD08_RS05050;Dbxref=Genbank:WP_001031729.1;Name=WP_001031729.1;gbkey=CDS;gene=gph;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417844.1;locus_tag=AD08_RS05050;product=phosphoglycolate phosphatase;protein_id=WP_001031729.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 56723 57400 . - . ID=gene-AD08_RS05045;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=AD08_RS05045;old_locus_tag=AD08_3718 NZ_JHDJ01000176.1 Protein Homology CDS 56723 57400 . - 0 ID=cds-WP_000816280.1;Parent=gene-AD08_RS05045;Dbxref=Genbank:WP_000816280.1;Name=WP_000816280.1;gbkey=CDS;gene=rpe;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312255.1;locus_tag=AD08_RS05045;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816280.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 57418 58254 . - . ID=gene-AD08_RS05040;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=AD08_RS05040;old_locus_tag=AD08_3719 NZ_JHDJ01000176.1 Protein Homology CDS 57418 58254 . - 0 ID=cds-WP_000742143.1;Parent=gene-AD08_RS05040;Dbxref=Genbank:WP_000742143.1;Name=WP_000742143.1;gbkey=CDS;gene=dam;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312256.1;locus_tag=AD08_RS05040;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742143.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 58361 59647 . - . ID=gene-AD08_RS05035;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=AD08_RS05035;old_locus_tag=AD08_3720 NZ_JHDJ01000176.1 Protein Homology CDS 58361 59647 . - 0 ID=cds-WP_032179278.1;Parent=gene-AD08_RS05035;Dbxref=Genbank:WP_032179278.1;Name=WP_032179278.1;gbkey=CDS;gene=damX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417847.1;locus_tag=AD08_RS05035;product=cell division protein DamX;protein_id=WP_032179278.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 59739 60827 . - . ID=gene-AD08_RS05030;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=AD08_RS05030;old_locus_tag=AD08_3721 NZ_JHDJ01000176.1 Protein Homology CDS 59739 60827 . - 0 ID=cds-WP_000439848.1;Parent=gene-AD08_RS05030;Dbxref=Genbank:WP_000439848.1;Name=WP_000439848.1;gbkey=CDS;gene=aroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417848.1;locus_tag=AD08_RS05030;product=3-dehydroquinate synthase;protein_id=WP_000439848.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 60884 61405 . - . ID=gene-AD08_RS05025;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AD08_RS05025;old_locus_tag=AD08_3722 NZ_JHDJ01000176.1 Protein Homology CDS 60884 61405 . - 0 ID=cds-WP_000818618.1;Parent=gene-AD08_RS05025;Dbxref=Genbank:WP_000818618.1;Name=WP_000818618.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=AD08_RS05025;product=shikimate kinase AroK;protein_id=WP_000818618.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 61806 63044 . - . ID=gene-AD08_RS05020;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=AD08_RS05020;old_locus_tag=AD08_3723 NZ_JHDJ01000176.1 Protein Homology CDS 61806 63044 . - 0 ID=cds-WP_000815987.1;Parent=gene-AD08_RS05020;Dbxref=Genbank:WP_000815987.1;Name=WP_000815987.1;gbkey=CDS;gene=hofQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417850.1;locus_tag=AD08_RS05020;product=DNA uptake porin HofQ;protein_id=WP_000815987.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 62956 63360 . - . ID=gene-AD08_RS05015;Name=hofP;gbkey=Gene;gene=hofP;gene_biotype=protein_coding;locus_tag=AD08_RS05015;old_locus_tag=AD08_3724 NZ_JHDJ01000176.1 Protein Homology CDS 62956 63360 . - 0 ID=cds-WP_001264141.1;Parent=gene-AD08_RS05015;Dbxref=Genbank:WP_001264141.1;Name=WP_001264141.1;gbkey=CDS;gene=hofP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417851.4;locus_tag=AD08_RS05015;product=DNA utilization protein HofP;protein_id=WP_001264141.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 63350 63790 . - . ID=gene-AD08_RS05010;Name=hofO;gbkey=Gene;gene=hofO;gene_biotype=protein_coding;locus_tag=AD08_RS05010;old_locus_tag=AD08_3725 NZ_JHDJ01000176.1 Protein Homology CDS 63350 63790 . - 0 ID=cds-WP_001055760.1;Parent=gene-AD08_RS05010;Dbxref=Genbank:WP_001055760.1;Name=WP_001055760.1;gbkey=CDS;gene=hofO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417852.1;locus_tag=AD08_RS05010;product=DNA utilization protein HofO;protein_id=WP_001055760.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 63774 64313 . - . ID=gene-AD08_RS05005;Name=AD08_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS05005;old_locus_tag=AD08_3726 NZ_JHDJ01000176.1 Protein Homology CDS 63774 64313 . - 0 ID=cds-WP_001069315.1;Parent=gene-AD08_RS05005;Dbxref=Genbank:WP_001069315.1;Name=WP_001069315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417853.1;locus_tag=AD08_RS05005;product=DNA utilization protein HofN;protein_id=WP_001069315.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 64313 65092 . - . ID=gene-AD08_RS05000;Name=hofM;gbkey=Gene;gene=hofM;gene_biotype=protein_coding;locus_tag=AD08_RS05000;old_locus_tag=AD08_3727 NZ_JHDJ01000176.1 Protein Homology CDS 64313 65092 . - 0 ID=cds-WP_001295166.1;Parent=gene-AD08_RS05000;Dbxref=Genbank:WP_001295166.1;Name=WP_001295166.1;gbkey=CDS;gene=hofM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417854.4;locus_tag=AD08_RS05000;product=DNA utilization protein HofM;protein_id=WP_001295166.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 65212 67764 . + . ID=gene-AD08_RS04995;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=AD08_RS04995;old_locus_tag=AD08_3728 NZ_JHDJ01000176.1 Protein Homology CDS 65212 67764 . + 0 ID=cds-WP_001336003.1;Parent=gene-AD08_RS04995;Dbxref=Genbank:WP_001336003.1;Name=WP_001336003.1;gbkey=CDS;gene=mrcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417855.4;locus_tag=AD08_RS04995;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_001336003.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 67930 68490 . - . ID=gene-AD08_RS04990;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=AD08_RS04990;old_locus_tag=AD08_3729 NZ_JHDJ01000176.1 Protein Homology CDS 67930 68490 . - 0 ID=cds-WP_000045744.1;Parent=gene-AD08_RS04990;Dbxref=Genbank:WP_000045744.1;Name=WP_000045744.1;gbkey=CDS;gene=nudE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417856.1;locus_tag=AD08_RS04990;product=ADP compounds hydrolase NudE;protein_id=WP_000045744.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 68810 70945 . + . ID=gene-AD08_RS04985;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=AD08_RS04985;old_locus_tag=AD08_3730 NZ_JHDJ01000176.1 Protein Homology CDS 68810 70945 . + 0 ID=cds-WP_032219288.1;Parent=gene-AD08_RS04985;Dbxref=Genbank:WP_032219288.1;Name=WP_032219288.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417857.1;locus_tag=AD08_RS04985;product=intracellular growth attenuator protein IgaA;protein_id=WP_032219288.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 71010 71678 . + . ID=gene-AD08_RS04980;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=AD08_RS04980;old_locus_tag=AD08_3731 NZ_JHDJ01000176.1 Protein Homology CDS 71010 71678 . + 0 ID=cds-WP_001295168.1;Parent=gene-AD08_RS04980;Dbxref=Genbank:WP_001295168.1;Name=WP_001295168.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312268.2;locus_tag=AD08_RS04980;product=GMP/IMP nucleotidase;protein_id=WP_001295168.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 71689 72090 . + . ID=gene-AD08_RS04975;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=AD08_RS04975;old_locus_tag=AD08_3732 NZ_JHDJ01000176.1 Protein Homology CDS 71689 72090 . + 0 ID=cds-WP_000660483.1;Parent=gene-AD08_RS04975;Dbxref=Genbank:WP_000660483.1;Name=WP_000660483.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312269.1;locus_tag=AD08_RS04975;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660483.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 72115 72993 . + . ID=gene-AD08_RS04970;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=AD08_RS04970;old_locus_tag=AD08_3733 NZ_JHDJ01000176.1 Protein Homology CDS 72115 72993 . + 0 ID=cds-WP_001135574.1;Parent=gene-AD08_RS04970;Dbxref=Genbank:WP_001135574.1;Name=WP_001135574.1;gbkey=CDS;gene=hslO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=AD08_RS04970;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135574.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 73056 74780 . - . ID=gene-AD08_RS04965;Name=AD08_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04965;old_locus_tag=AD08_3734 NZ_JHDJ01000176.1 Protein Homology CDS 73056 74780 . - 0 ID=cds-WP_000370879.1;Parent=gene-AD08_RS04965;Dbxref=Genbank:WP_000370879.1;Name=WP_000370879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417861.1;locus_tag=AD08_RS04965;product=DUF4153 domain-containing protein;protein_id=WP_000370879.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 75159 76781 . + . ID=gene-AD08_RS04955;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=AD08_RS04955;old_locus_tag=AD08_3737 NZ_JHDJ01000176.1 Protein Homology CDS 75159 76781 . + 0 ID=cds-WP_001265681.1;Parent=gene-AD08_RS04955;Dbxref=Genbank:WP_001265681.1;Name=WP_001265681.1;gbkey=CDS;gene=pckA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417862.1;locus_tag=AD08_RS04955;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265681.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 76857 78209 . - . ID=gene-AD08_RS04950;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=AD08_RS04950;old_locus_tag=AD08_3738 NZ_JHDJ01000176.1 Protein Homology CDS 76857 78209 . - 0 ID=cds-WP_001253696.1;Parent=gene-AD08_RS04950;Dbxref=Genbank:WP_001253696.1;Name=WP_001253696.1;gbkey=CDS;gene=envZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417863.1;locus_tag=AD08_RS04950;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253696.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 78206 78925 . - . ID=gene-AD08_RS04945;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=AD08_RS04945;old_locus_tag=AD08_3739 NZ_JHDJ01000176.1 Protein Homology CDS 78206 78925 . - 0 ID=cds-WP_001157751.1;Parent=gene-AD08_RS04945;Dbxref=Genbank:WP_001157751.1;Name=WP_001157751.1;gbkey=CDS;gene=ompR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018150685.1;locus_tag=AD08_RS04945;product=two-component system response regulator OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 79117 79629 . + . ID=gene-AD08_RS04940;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=AD08_RS04940;old_locus_tag=AD08_3740 NZ_JHDJ01000176.1 Protein Homology CDS 79117 79629 . + 0 ID=cds-WP_001326748.1;Parent=gene-AD08_RS04940;Dbxref=Genbank:WP_001326748.1;Name=WP_001326748.1;gbkey=CDS;gene=greB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709179.3;locus_tag=AD08_RS04940;product=transcription elongation factor GreB;protein_id=WP_001326748.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 79726 82047 . + . ID=gene-AD08_RS04935;Name=AD08_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04935;old_locus_tag=AD08_3741 NZ_JHDJ01000176.1 Protein Homology CDS 79726 82047 . + 0 ID=cds-WP_000980706.1;Parent=gene-AD08_RS04935;Dbxref=Genbank:WP_000980706.1;Name=WP_000980706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417866.4;locus_tag=AD08_RS04935;product=RNA-binding transcriptional accessory protein;protein_id=WP_000980706.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 82504 82731 . + . ID=gene-AD08_RS04930;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=AD08_RS04930;old_locus_tag=AD08_3742 NZ_JHDJ01000176.1 Protein Homology CDS 82504 82731 . + 0 ID=cds-WP_001200455.1;Parent=gene-AD08_RS04930;Dbxref=Genbank:WP_001200455.1;Name=WP_001200455.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312277.1;locus_tag=AD08_RS04930;product=ferrous iron transporter A;protein_id=WP_001200455.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 82748 85069 . + . ID=gene-AD08_RS04925;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=AD08_RS04925;old_locus_tag=AD08_3743 NZ_JHDJ01000176.1 Protein Homology CDS 82748 85069 . + 0 ID=cds-WP_000737039.1;Parent=gene-AD08_RS04925;Dbxref=Genbank:WP_000737039.1;Name=WP_000737039.1;gbkey=CDS;gene=feoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417868.1;locus_tag=AD08_RS04925;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000737039.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 85069 85305 . + . ID=gene-AD08_RS04920;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=AD08_RS04920;old_locus_tag=AD08_3744 NZ_JHDJ01000176.1 Protein Homology CDS 85069 85305 . + 0 ID=cds-WP_000157586.1;Parent=gene-AD08_RS04920;Dbxref=Genbank:WP_000157586.1;Name=WP_000157586.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312279.1;locus_tag=AD08_RS04920;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157586.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 85508 86386 . + . ID=gene-AD08_RS04915;Name=rpnA;gbkey=Gene;gene=rpnA;gene_biotype=protein_coding;locus_tag=AD08_RS04915;old_locus_tag=AD08_3745 NZ_JHDJ01000176.1 Protein Homology CDS 85508 86386 . + 0 ID=cds-WP_000039062.1;Parent=gene-AD08_RS04915;Dbxref=Genbank:WP_000039062.1;Name=WP_000039062.1;gbkey=CDS;gene=rpnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417870.1;locus_tag=AD08_RS04915;product=recombination-promoting nuclease RpnA;protein_id=WP_000039062.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 86415 87185 . - . ID=gene-AD08_RS04910;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=AD08_RS04910;old_locus_tag=AD08_3746 NZ_JHDJ01000176.1 Protein Homology CDS 86415 87185 . - 0 ID=cds-WP_001060070.1;Parent=gene-AD08_RS04910;Dbxref=Genbank:WP_001060070.1;Name=WP_001060070.1;gbkey=CDS;gene=bioH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417871.1;locus_tag=AD08_RS04910;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_001060070.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 87223 87906 . + . ID=gene-AD08_RS04905;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=AD08_RS04905;old_locus_tag=AD08_3748 NZ_JHDJ01000176.1 Protein Homology CDS 87223 87906 . + 0 ID=cds-WP_001333371.1;Parent=gene-AD08_RS04905;Dbxref=Genbank:WP_001333371.1;Name=WP_001333371.1;gbkey=CDS;gene=gntX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417872.2;locus_tag=AD08_RS04905;product=DNA utilization protein GntX;protein_id=WP_001333371.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 87965 88540 . + . ID=gene-AD08_RS04900;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=AD08_RS04900;old_locus_tag=AD08_3749 NZ_JHDJ01000176.1 Protein Homology CDS 87965 88540 . + 0 ID=cds-WP_000619389.1;Parent=gene-AD08_RS04900;Dbxref=Genbank:WP_000619389.1;Name=WP_000619389.1;gbkey=CDS;gene=nfuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=AD08_RS04900;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619389.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 88900 90216 . + . ID=gene-AD08_RS04895;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=AD08_RS04895;old_locus_tag=AD08_3750 NZ_JHDJ01000176.1 Protein Homology CDS 88900 90216 . + 0 ID=cds-WP_001131758.1;Parent=gene-AD08_RS04895;Dbxref=Genbank:WP_001131758.1;Name=WP_001131758.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312284.1;locus_tag=AD08_RS04895;product=gluconate transporter;protein_id=WP_001131758.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 90327 92411 . - . ID=gene-AD08_RS04890;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=AD08_RS04890;old_locus_tag=AD08_3751 NZ_JHDJ01000176.1 Protein Homology CDS 90327 92411 . - 0 ID=cds-WP_000444343.1;Parent=gene-AD08_RS04890;Dbxref=Genbank:WP_000444343.1;Name=WP_000444343.1;gbkey=CDS;gene=malQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417875.1;locus_tag=AD08_RS04890;product=4-alpha-glucanotransferase;protein_id=WP_000444343.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 92421 94814 . - . ID=gene-AD08_RS04885;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=AD08_RS04885;old_locus_tag=AD08_3752 NZ_JHDJ01000176.1 Protein Homology CDS 92421 94814 . - 0 ID=cds-WP_000081909.1;Parent=gene-AD08_RS04885;Dbxref=Genbank:WP_000081909.1;Name=WP_000081909.1;gbkey=CDS;gene=malP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026218.1;locus_tag=AD08_RS04885;product=maltodextrin phosphorylase;protein_id=WP_000081909.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 95426 98131 . + . ID=gene-AD08_RS04880;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=AD08_RS04880;old_locus_tag=AD08_3753 NZ_JHDJ01000176.1 Protein Homology CDS 95426 98131 . + 0 ID=cds-WP_032219291.1;Parent=gene-AD08_RS04880;Dbxref=Genbank:WP_032219291.1;Name=WP_032219291.1;gbkey=CDS;gene=malT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=AD08_RS04880;product=HTH-type transcriptional regulator MalT;protein_id=WP_032219291.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq pseudogene 98174 99191 . - . ID=gene-AD08_RS0126780;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=pseudogene;locus_tag=AD08_RS0126780;pseudo=true NZ_JHDJ01000176.1 Protein Homology CDS 98174 99191 . - 0 ID=cds-AD08_RS0126780;Parent=gene-AD08_RS0126780;Note=frameshifted;gbkey=CDS;gene=rtcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026219.1;locus_tag=AD08_RS0126780;product=RNA 3'-terminal phosphate cyclase;pseudo=true;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 99195 100421 . - . ID=gene-AD08_RS04875;Name=AD08_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04875;old_locus_tag=AD08_3756 NZ_JHDJ01000176.1 Protein Homology CDS 99195 100421 . - 0 ID=cds-WP_001105504.1;Parent=gene-AD08_RS04875;Dbxref=Genbank:WP_001105504.1;Name=WP_001105504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=AD08_RS04875;product=RNA-splicing ligase RtcB;protein_id=WP_001105504.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 100610 102208 . + . ID=gene-AD08_RS04870;Name=AD08_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04870;old_locus_tag=AD08_3757 NZ_JHDJ01000176.1 Protein Homology CDS 100610 102208 . + 0 ID=cds-WP_001232946.1;Parent=gene-AD08_RS04870;Dbxref=Genbank:WP_001232946.1;Name=WP_001232946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417880.1;locus_tag=AD08_RS04870;product=DNA-binding transcriptional regulator RtcR;protein_id=WP_001232946.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 102190 102948 . - . ID=gene-AD08_RS04865;Name=AD08_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04865;old_locus_tag=AD08_3758 NZ_JHDJ01000176.1 Protein Homology CDS 102190 102948 . - 0 ID=cds-WP_000815099.1;Parent=gene-AD08_RS04865;Dbxref=Genbank:WP_000815099.1;Name=WP_000815099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=AD08_RS04865;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815099.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 102965 103795 . - . ID=gene-AD08_RS04860;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=AD08_RS04860;old_locus_tag=AD08_3759 NZ_JHDJ01000176.1 Protein Homology CDS 102965 103795 . - 0 ID=cds-WP_000928723.1;Parent=gene-AD08_RS04860;Dbxref=Genbank:WP_000928723.1;Name=WP_000928723.1;gbkey=CDS;gene=glpG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026220.1;locus_tag=AD08_RS04860;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928723.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 103840 104166 . - . ID=gene-AD08_RS04855;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=AD08_RS04855;old_locus_tag=AD08_3760 NZ_JHDJ01000176.1 Protein Homology CDS 103840 104166 . - 0 ID=cds-WP_000371928.1;Parent=gene-AD08_RS04855;Dbxref=Genbank:WP_000371928.1;Name=WP_000371928.1;gbkey=CDS;gene=glpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417883.1;locus_tag=AD08_RS04855;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000371928.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 104356 105861 . + . ID=gene-AD08_RS04850;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=AD08_RS04850;old_locus_tag=AD08_3761 NZ_JHDJ01000176.1 Protein Homology CDS 104356 105861 . + 0 ID=cds-WP_032219293.1;Parent=gene-AD08_RS04850;Dbxref=Genbank:WP_032219293.1;Name=WP_032219293.1;gbkey=CDS;gene=glpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121613.1;locus_tag=AD08_RS04850;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_032219293.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq pseudogene 106130 106351 . - . ID=gene-AD08_RS04845;Name=AD08_RS04845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS04845;old_locus_tag=AD08_3762;partial=true;pseudo=true;start_range=.,106130 NZ_JHDJ01000176.1 Protein Homology CDS 106130 106351 . - 0 ID=cds-AD08_RS04845;Parent=gene-AD08_RS04845;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312299.2;locus_tag=AD08_RS04845;partial=true;product=phosphate ABC transporter substrate-binding protein;pseudo=true;start_range=.,106130;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 106477 108924 . - . ID=gene-AD08_RS04840;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=AD08_RS04840;old_locus_tag=AD08_3764 NZ_JHDJ01000176.1 Protein Homology CDS 106477 108924 . - 0 ID=cds-WP_000993449.1;Parent=gene-AD08_RS04840;Dbxref=Genbank:WP_000993449.1;Name=WP_000993449.1;gbkey=CDS;gene=glgP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417886.1;locus_tag=AD08_RS04840;product=glycogen phosphorylase;protein_id=WP_000993449.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 108943 110376 . - . ID=gene-AD08_RS04835;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=AD08_RS04835;old_locus_tag=AD08_3765 NZ_JHDJ01000176.1 Protein Homology CDS 108943 110376 . - 0 ID=cds-WP_001197646.1;Parent=gene-AD08_RS04835;Dbxref=Genbank:WP_001197646.1;Name=WP_001197646.1;gbkey=CDS;gene=glgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312301.1;locus_tag=AD08_RS04835;product=glycogen synthase GlgA;protein_id=WP_001197646.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 110376 111671 . - . ID=gene-AD08_RS04830;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=AD08_RS04830;old_locus_tag=AD08_3766 NZ_JHDJ01000176.1 Protein Homology CDS 110376 111671 . - 0 ID=cds-WP_032219295.1;Parent=gene-AD08_RS04830;Dbxref=Genbank:WP_032219295.1;Name=WP_032219295.1;gbkey=CDS;gene=glgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312302.1;locus_tag=AD08_RS04830;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_032219295.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 111689 113662 . - . ID=gene-AD08_RS04825;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=AD08_RS04825;old_locus_tag=AD08_3767 NZ_JHDJ01000176.1 Protein Homology CDS 111689 113662 . - 0 ID=cds-WP_001399469.1;Parent=gene-AD08_RS04825;Dbxref=Genbank:WP_001399469.1;Name=WP_001399469.1;gbkey=CDS;gene=glgX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417889.1;locus_tag=AD08_RS04825;product=glycogen debranching protein GlgX;protein_id=WP_001399469.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 113659 115845 . - . ID=gene-AD08_RS04820;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=AD08_RS04820;old_locus_tag=AD08_3768 NZ_JHDJ01000176.1 Protein Homology CDS 113659 115845 . - 0 ID=cds-WP_001283707.1;Parent=gene-AD08_RS04820;Dbxref=Genbank:WP_001283707.1;Name=WP_001283707.1;gbkey=CDS;gene=glgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417890.1;locus_tag=AD08_RS04820;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_001283707.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 116118 117221 . - . ID=gene-AD08_RS04815;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AD08_RS04815;old_locus_tag=AD08_3769 NZ_JHDJ01000176.1 Protein Homology CDS 116118 117221 . - 0 ID=cds-WP_000799956.1;Parent=gene-AD08_RS04815;Dbxref=Genbank:WP_000799956.1;Name=WP_000799956.1;gbkey=CDS;gene=asd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121607.1;locus_tag=AD08_RS04815;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799956.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 117414 118007 . + . ID=gene-AD08_RS04810;Name=yhgN;gbkey=Gene;gene=yhgN;gene_biotype=protein_coding;locus_tag=AD08_RS04810;old_locus_tag=AD08_3771 NZ_JHDJ01000176.1 Protein Homology CDS 117414 118007 . + 0 ID=cds-WP_001002544.1;Parent=gene-AD08_RS04810;Dbxref=Genbank:WP_001002544.1;Name=WP_001002544.1;gbkey=CDS;gene=yhgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=AD08_RS04810;product=NAAT family transporter YhgN;protein_id=WP_001002544.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 118064 119404 . - . ID=gene-AD08_RS04805;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=AD08_RS04805;old_locus_tag=AD08_3772 NZ_JHDJ01000176.1 Protein Homology CDS 118064 119404 . - 0 ID=cds-WP_000210111.1;Parent=gene-AD08_RS04805;Dbxref=Genbank:WP_000210111.1;Name=WP_000210111.1;gbkey=CDS;gene=gntU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312312.1;locus_tag=AD08_RS04805;product=gluconate transporter;protein_id=WP_000210111.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 119408 119935 . - . ID=gene-AD08_RS04800;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=AD08_RS04800;old_locus_tag=AD08_3773 NZ_JHDJ01000176.1 Protein Homology CDS 119408 119935 . - 0 ID=cds-WP_000108330.1;Parent=gene-AD08_RS04800;Dbxref=Genbank:WP_000108330.1;Name=WP_000108330.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417894.2;locus_tag=AD08_RS04800;product=gluconokinase;protein_id=WP_000108330.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 120074 121069 . - . ID=gene-AD08_RS04795;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=AD08_RS04795;old_locus_tag=AD08_3774 NZ_JHDJ01000176.1 Protein Homology CDS 120074 121069 . - 0 ID=cds-WP_032181429.1;Parent=gene-AD08_RS04795;Dbxref=Genbank:WP_032181429.1;Name=WP_032181429.1;gbkey=CDS;gene=gntR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=AD08_RS04795;product=gluconate operon transcriptional repressor GntR;protein_id=WP_032181429.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 121293 121988 . - . ID=gene-AD08_RS04790;Name=AD08_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04790;old_locus_tag=AD08_3775 NZ_JHDJ01000176.1 Protein Homology CDS 121293 121988 . - 0 ID=cds-WP_000639811.1;Parent=gene-AD08_RS04790;Dbxref=Genbank:WP_000639811.1;Name=WP_000639811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417896.1;locus_tag=AD08_RS04790;product=quercetin 2%2C3-dioxygenase;protein_id=WP_000639811.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 122111 123148 . - . ID=gene-AD08_RS04785;Name=AD08_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04785;old_locus_tag=AD08_3776 NZ_JHDJ01000176.1 Protein Homology CDS 122111 123148 . - 0 ID=cds-WP_000236293.1;Parent=gene-AD08_RS04785;Dbxref=Genbank:WP_000236293.1;Name=WP_000236293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417897.1;locus_tag=AD08_RS04785;product=oxidoreductase;protein_id=WP_000236293.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 123481 123969 . + . ID=gene-AD08_RS0126785;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=AD08_RS0126785 NZ_JHDJ01000176.1 Protein Homology CDS 123481 123969 . + 0 ID=cds-WP_001295206.1;Parent=gene-AD08_RS0126785;Dbxref=Genbank:WP_001295206.1;Name=WP_001295206.1;gbkey=CDS;gene=yhhY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417898.1;locus_tag=AD08_RS0126785;product=N-acetyltransferase;protein_id=WP_001295206.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 124206 125384 . + . ID=gene-AD08_RS04780;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;locus_tag=AD08_RS04780;old_locus_tag=AD08_3778 NZ_JHDJ01000176.1 Protein Homology CDS 124206 125384 . + 0 ID=cds-WP_000065894.1;Parent=gene-AD08_RS04780;Dbxref=Genbank:WP_000065894.1;Name=WP_000065894.1;gbkey=CDS;gene=hcp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417899.1;locus_tag=AD08_RS04780;product=Hcp1 family type VI secretion system effector;protein_id=WP_000065894.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 125381 125875 . + . ID=gene-AD08_RS04775;Name=AD08_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04775;old_locus_tag=AD08_3779 NZ_JHDJ01000176.1 Protein Homology CDS 125381 125875 . + 0 ID=cds-WP_000988499.1;Parent=gene-AD08_RS04775;Dbxref=Genbank:WP_000988499.1;Name=WP_000988499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001759491.1;locus_tag=AD08_RS04775;product=hypothetical protein;protein_id=WP_000988499.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 125970 126125 . + . ID=gene-AD08_RS31795;Name=AD08_RS31795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31795 NZ_JHDJ01000176.1 Protein Homology CDS 125970 126125 . + 0 ID=cds-WP_001307436.1;Parent=gene-AD08_RS31795;Dbxref=Genbank:WP_001307436.1;Name=WP_001307436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518820.1;locus_tag=AD08_RS31795;product=hypothetical protein;protein_id=WP_001307436.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 126325 126609 . + . ID=gene-AD08_RS04770;Name=AD08_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04770;old_locus_tag=AD08_3780 NZ_JHDJ01000176.1 Protein Homology CDS 126325 126609 . + 0 ID=cds-WP_000634159.1;Parent=gene-AD08_RS04770;Dbxref=Genbank:WP_000634159.1;Name=WP_000634159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417903.1;locus_tag=AD08_RS04770;product=heat-shock protein;protein_id=WP_000634159.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 126647 128389 . - . ID=gene-AD08_RS04765;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=AD08_RS04765;old_locus_tag=AD08_3781 NZ_JHDJ01000176.1 Protein Homology CDS 126647 128389 . - 0 ID=cds-WP_000595082.1;Parent=gene-AD08_RS04765;Dbxref=Genbank:WP_000595082.1;Name=WP_000595082.1;gbkey=CDS;gene=ggt;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417904.1;locus_tag=AD08_RS04765;product=gamma-glutamyltransferase;protein_id=WP_000595082.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 128509 128949 . + . ID=gene-AD08_RS04760;Name=AD08_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04760;old_locus_tag=AD08_3782 NZ_JHDJ01000176.1 Protein Homology CDS 128509 128949 . + 0 ID=cds-WP_000825996.1;Parent=gene-AD08_RS04760;Dbxref=Genbank:WP_000825996.1;Name=WP_000825996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417905.1;locus_tag=AD08_RS04760;product=DUF2756 family protein;protein_id=WP_000825996.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 128936 129679 . - . ID=gene-AD08_RS04755;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=AD08_RS04755;old_locus_tag=AD08_3783 NZ_JHDJ01000176.1 Protein Homology CDS 128936 129679 . - 0 ID=cds-WP_000073613.1;Parent=gene-AD08_RS04755;Dbxref=Genbank:WP_000073613.1;Name=WP_000073613.1;gbkey=CDS;gene=ugpQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417906.1;locus_tag=AD08_RS04755;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073613.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 129676 130746 . - . ID=gene-AD08_RS04750;Name=AD08_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04750;old_locus_tag=AD08_3784 NZ_JHDJ01000176.1 Protein Homology CDS 129676 130746 . - 0 ID=cds-WP_000907792.1;Parent=gene-AD08_RS04750;Dbxref=Genbank:WP_000907792.1;Name=WP_000907792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417907.2;locus_tag=AD08_RS04750;product=sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC;protein_id=WP_000907792.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 130748 131593 . - . ID=gene-AD08_RS04745;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=AD08_RS04745;old_locus_tag=AD08_3785 NZ_JHDJ01000176.1 Protein Homology CDS 130748 131593 . - 0 ID=cds-WP_000572176.1;Parent=gene-AD08_RS04745;Dbxref=Genbank:WP_000572176.1;Name=WP_000572176.1;gbkey=CDS;gene=ugpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=AD08_RS04745;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572176.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 131590 132477 . - . ID=gene-AD08_RS04740;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=AD08_RS04740;old_locus_tag=AD08_3786 NZ_JHDJ01000176.1 Protein Homology CDS 131590 132477 . - 0 ID=cds-WP_000099289.1;Parent=gene-AD08_RS04740;Dbxref=Genbank:WP_000099289.1;Name=WP_000099289.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=AD08_RS04740;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099289.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 132575 133891 . - . ID=gene-AD08_RS04735;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=AD08_RS04735;old_locus_tag=AD08_3787 NZ_JHDJ01000176.1 Protein Homology CDS 132575 133891 . - 0 ID=cds-WP_000803190.1;Parent=gene-AD08_RS04735;Dbxref=Genbank:WP_000803190.1;Name=WP_000803190.1;gbkey=CDS;gene=ugpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312326.1;locus_tag=AD08_RS04735;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000803190.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 134290 135003 . - . ID=gene-AD08_RS04730;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=AD08_RS04730;old_locus_tag=AD08_3789 NZ_JHDJ01000176.1 Protein Homology CDS 134290 135003 . - 0 ID=cds-WP_000416891.1;Parent=gene-AD08_RS04730;Dbxref=Genbank:WP_000416891.1;Name=WP_000416891.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417911.4;locus_tag=AD08_RS04730;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416891.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 135005 135772 . - . ID=gene-AD08_RS04725;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=AD08_RS04725;old_locus_tag=AD08_3790 NZ_JHDJ01000176.1 Protein Homology CDS 135005 135772 . - 0 ID=cds-WP_000082101.1;Parent=gene-AD08_RS04725;Dbxref=Genbank:WP_000082101.1;Name=WP_000082101.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=AD08_RS04725;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082101.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 135769 137046 . - . ID=gene-AD08_RS04720;Name=AD08_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04720;old_locus_tag=AD08_3791 NZ_JHDJ01000176.1 Protein Homology CDS 135769 137046 . - 0 ID=cds-WP_032219298.1;Parent=gene-AD08_RS04720;Dbxref=Genbank:WP_032219298.1;Name=WP_032219298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417913.1;locus_tag=AD08_RS04720;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_032219298.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 137043 137969 . - . ID=gene-AD08_RS04715;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=AD08_RS04715;old_locus_tag=AD08_3792 NZ_JHDJ01000176.1 Protein Homology CDS 137043 137969 . - 0 ID=cds-WP_001295111.1;Parent=gene-AD08_RS04715;Dbxref=Genbank:WP_001295111.1;Name=WP_001295111.1;gbkey=CDS;gene=livH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=AD08_RS04715;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_001295111.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 138017 139126 . - . ID=gene-AD08_RS04710;Name=livk;gbkey=Gene;gene=livk;gene_biotype=protein_coding;locus_tag=AD08_RS04710;old_locus_tag=AD08_3793 NZ_JHDJ01000176.1 Protein Homology CDS 138017 139126 . - 0 ID=cds-WP_001388570.1;Parent=gene-AD08_RS04710;Dbxref=Genbank:WP_001388570.1;Name=WP_001388570.1;gbkey=CDS;gene=livk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417915.1;locus_tag=AD08_RS04710;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_001388570.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 139550 139933 . + . ID=gene-AD08_RS04705;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=AD08_RS04705;old_locus_tag=AD08_3795 NZ_JHDJ01000176.1 Protein Homology CDS 139550 139933 . + 0 ID=cds-WP_000778768.1;Parent=gene-AD08_RS04705;Dbxref=Genbank:WP_000778768.1;Name=WP_000778768.1;gbkey=CDS;gene=panM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417916.1;locus_tag=AD08_RS04705;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778768.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 140121 141224 . - . ID=gene-AD08_RS04700;Name=AD08_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04700;old_locus_tag=AD08_3796 NZ_JHDJ01000176.1 Protein Homology CDS 140121 141224 . - 0 ID=cds-WP_001021996.1;Parent=gene-AD08_RS04700;Dbxref=Genbank:WP_001021996.1;Name=WP_001021996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=AD08_RS04700;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001021996.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 141495 142349 . - . ID=gene-AD08_RS04695;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=AD08_RS04695;old_locus_tag=AD08_3797 NZ_JHDJ01000176.1 Protein Homology CDS 141495 142349 . - 0 ID=cds-WP_000130217.1;Parent=gene-AD08_RS04695;Dbxref=Genbank:WP_000130217.1;Name=WP_000130217.1;gbkey=CDS;gene=rpoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007899894.1;locus_tag=AD08_RS04695;product=RNA polymerase sigma factor RpoH;protein_id=WP_000130217.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 142594 143652 . - . ID=gene-AD08_RS04690;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=AD08_RS04690;old_locus_tag=AD08_3798 NZ_JHDJ01000176.1 Protein Homology CDS 142594 143652 . - 0 ID=cds-WP_001042003.1;Parent=gene-AD08_RS04690;Dbxref=Genbank:WP_001042003.1;Name=WP_001042003.1;gbkey=CDS;gene=ftsX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417919.1;locus_tag=AD08_RS04690;product=cell division protein FtsX;protein_id=WP_001042003.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 143645 144313 . - . ID=gene-AD08_RS04685;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=AD08_RS04685;old_locus_tag=AD08_3799 NZ_JHDJ01000176.1 Protein Homology CDS 143645 144313 . - 0 ID=cds-WP_000617723.1;Parent=gene-AD08_RS04685;Dbxref=Genbank:WP_000617723.1;Name=WP_000617723.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312339.1;locus_tag=AD08_RS04685;product=cell division ATP-binding protein FtsE;protein_id=WP_000617723.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 144316 145809 . - . ID=gene-AD08_RS04680;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=AD08_RS04680;old_locus_tag=AD08_3800 NZ_JHDJ01000176.1 Protein Homology CDS 144316 145809 . - 0 ID=cds-WP_032219300.1;Parent=gene-AD08_RS04680;Dbxref=Genbank:WP_032219300.1;Name=WP_032219300.1;gbkey=CDS;gene=ftsY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417921.1;locus_tag=AD08_RS04680;product=signal recognition particle-docking protein FtsY;protein_id=WP_032219300.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 145959 146555 . + . ID=gene-AD08_RS04675;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=AD08_RS04675;old_locus_tag=AD08_3801 NZ_JHDJ01000176.1 Protein Homology CDS 145959 146555 . + 0 ID=cds-WP_000743193.1;Parent=gene-AD08_RS04675;Dbxref=Genbank:WP_000743193.1;Name=WP_000743193.1;gbkey=CDS;gene=rsmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417922.1;locus_tag=AD08_RS04675;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743193.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 146545 146814 . + . ID=gene-AD08_RS04670;Name=AD08_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04670;old_locus_tag=AD08_3802 NZ_JHDJ01000176.1 Protein Homology CDS 146545 146814 . + 0 ID=cds-WP_001311191.1;Parent=gene-AD08_RS04670;Dbxref=Genbank:WP_001311191.1;Name=WP_001311191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417923.1;locus_tag=AD08_RS04670;product=DUF1145 family protein;protein_id=WP_001311191.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 146817 147176 . - . ID=gene-AD08_RS04665;Name=AD08_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04665;old_locus_tag=AD08_3803 NZ_JHDJ01000176.1 Protein Homology CDS 146817 147176 . - 0 ID=cds-WP_000042895.1;Parent=gene-AD08_RS04665;Dbxref=Genbank:WP_000042895.1;Name=WP_000042895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417924.1;locus_tag=AD08_RS04665;product=DUF2500 domain-containing protein;protein_id=WP_000042895.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 147317 147943 . + . ID=gene-AD08_RS04660;Name=AD08_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04660;old_locus_tag=AD08_3804 NZ_JHDJ01000176.1 Protein Homology CDS 147317 147943 . + 0 ID=cds-WP_000964718.1;Parent=gene-AD08_RS04660;Dbxref=Genbank:WP_000964718.1;Name=WP_000964718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312344.1;locus_tag=AD08_RS04660;product=lysoplasmalogenase;protein_id=WP_000964718.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 148017 150215 . + . ID=gene-AD08_RS04655;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=AD08_RS04655;old_locus_tag=AD08_3805 NZ_JHDJ01000176.1 Protein Homology CDS 148017 150215 . + 0 ID=cds-WP_032219301.1;Parent=gene-AD08_RS04655;Dbxref=Genbank:WP_032219301.1;Name=WP_032219301.1;gbkey=CDS;gene=zntA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417926.1;locus_tag=AD08_RS04655;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_032219301.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 150318 150563 . - . ID=gene-AD08_RS04650;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=AD08_RS04650;old_locus_tag=AD08_3806 NZ_JHDJ01000176.1 Protein Homology CDS 150318 150563 . - 0 ID=cds-WP_000130621.1;Parent=gene-AD08_RS04650;Dbxref=Genbank:WP_000130621.1;Name=WP_000130621.1;gbkey=CDS;gene=tusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312346.1;locus_tag=AD08_RS04650;product=sulfurtransferase TusA;protein_id=WP_000130621.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 150784 151449 . + . ID=gene-AD08_RS04645;Name=AD08_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04645;old_locus_tag=AD08_3807 NZ_JHDJ01000176.1 Protein Homology CDS 150784 151449 . + 0 ID=cds-WP_001100469.1;Parent=gene-AD08_RS04645;Dbxref=Genbank:WP_001100469.1;Name=WP_001100469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417928.1;locus_tag=AD08_RS04645;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001100469.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 151522 152079 . + . ID=gene-AD08_RS04640;Name=dcrB;gbkey=Gene;gene=dcrB;gene_biotype=protein_coding;locus_tag=AD08_RS04640;old_locus_tag=AD08_3808 NZ_JHDJ01000176.1 Protein Homology CDS 151522 152079 . + 0 ID=cds-WP_001245295.1;Parent=gene-AD08_RS04640;Dbxref=Genbank:WP_001245295.1;Name=WP_001245295.1;gbkey=CDS;gene=dcrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417929.4;locus_tag=AD08_RS04640;product=phage sensitivity protein DcrB;protein_id=WP_001245295.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 152083 153300 . - . ID=gene-AD08_RS04635;Name=AD08_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04635;old_locus_tag=AD08_3809 NZ_JHDJ01000176.1 Protein Homology CDS 152083 153300 . - 0 ID=cds-WP_001300943.1;Parent=gene-AD08_RS04635;Dbxref=Genbank:WP_001300943.1;Name=WP_001300943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417930.2;locus_tag=AD08_RS04635;product=MFS transporter;protein_id=WP_001300943.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 153432 154481 . + . ID=gene-AD08_RS04630;Name=AD08_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04630;old_locus_tag=AD08_3810 NZ_JHDJ01000176.1 Protein Homology CDS 153432 154481 . + 0 ID=cds-WP_001300885.1;Parent=gene-AD08_RS04630;Dbxref=Genbank:WP_001300885.1;Name=WP_001300885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312350.2;locus_tag=AD08_RS04630;product=AI-2E family transporter;protein_id=WP_001300885.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 154536 155123 . + . ID=gene-AD08_RS04625;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=AD08_RS04625;old_locus_tag=AD08_3811 NZ_JHDJ01000176.1 Protein Homology CDS 154536 155123 . + 0 ID=cds-WP_000285774.1;Parent=gene-AD08_RS04625;Dbxref=Genbank:WP_000285774.1;Name=WP_000285774.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417932.1;locus_tag=AD08_RS04625;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000285774.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 155234 156808 . + . ID=gene-AD08_RS04620;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=AD08_RS04620;old_locus_tag=AD08_3812 NZ_JHDJ01000176.1 Protein Homology CDS 155234 156808 . + 0 ID=cds-WP_000953361.1;Parent=gene-AD08_RS04620;Dbxref=Genbank:WP_000953361.1;Name=WP_000953361.1;gbkey=CDS;gene=nikA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417933.1;locus_tag=AD08_RS04620;product=nickel ABC transporter%2C nickel/metallophore periplasmic binding protein;protein_id=WP_000953361.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 156808 157752 . + . ID=gene-AD08_RS04615;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=AD08_RS04615;old_locus_tag=AD08_3813 NZ_JHDJ01000176.1 Protein Homology CDS 156808 157752 . + 0 ID=cds-WP_001475861.1;Parent=gene-AD08_RS04615;Dbxref=Genbank:WP_001475861.1;Name=WP_001475861.1;gbkey=CDS;gene=nikB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417934.1;locus_tag=AD08_RS04615;product=nickel ABC transporter permease subunit NikB;protein_id=WP_001475861.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 157749 158582 . + . ID=gene-AD08_RS04610;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=AD08_RS04610;old_locus_tag=AD08_3814 NZ_JHDJ01000176.1 Protein Homology CDS 157749 158582 . + 0 ID=cds-WP_001008963.1;Parent=gene-AD08_RS04610;Dbxref=Genbank:WP_001008963.1;Name=WP_001008963.1;gbkey=CDS;gene=nikC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312372.1;locus_tag=AD08_RS04610;product=nickel ABC transporter permease subunit NikC;protein_id=WP_001008963.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 158582 159346 . + . ID=gene-AD08_RS04605;Name=nikD;gbkey=Gene;gene=nikD;gene_biotype=protein_coding;locus_tag=AD08_RS04605;old_locus_tag=AD08_3815 NZ_JHDJ01000176.1 Protein Homology CDS 158582 159346 . + 0 ID=cds-WP_032219303.1;Parent=gene-AD08_RS04605;Dbxref=Genbank:WP_032219303.1;Name=WP_032219303.1;gbkey=CDS;gene=nikD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417936.1;locus_tag=AD08_RS04605;product=nickel import ATP-binding protein NikD;protein_id=WP_032219303.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 159343 160149 . + . ID=gene-AD08_RS04600;Name=nikE;gbkey=Gene;gene=nikE;gene_biotype=protein_coding;locus_tag=AD08_RS04600;old_locus_tag=AD08_3816 NZ_JHDJ01000176.1 Protein Homology CDS 159343 160149 . + 0 ID=cds-WP_000173631.1;Parent=gene-AD08_RS04600;Dbxref=Genbank:WP_000173631.1;Name=WP_000173631.1;gbkey=CDS;gene=nikE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417937.1;locus_tag=AD08_RS04600;product=nickel import ATP-binding protein NikE;protein_id=WP_000173631.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq gene 160155 160556 . + . ID=gene-AD08_RS04595;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=AD08_RS04595;old_locus_tag=AD08_3817 NZ_JHDJ01000176.1 Protein Homology CDS 160155 160556 . + 0 ID=cds-WP_001190062.1;Parent=gene-AD08_RS04595;Dbxref=Genbank:WP_001190062.1;Name=WP_001190062.1;gbkey=CDS;gene=nikR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312375.1;locus_tag=AD08_RS04595;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190062.1;transl_table=11 NZ_JHDJ01000176.1 RefSeq pseudogene 160759 161124 . + . ID=gene-AD08_RS04590;Name=AD08_RS04590;end_range=161124,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS04590;old_locus_tag=AD08_3818;partial=true;pseudo=true NZ_JHDJ01000176.1 Protein Homology CDS 160759 161124 . + 0 ID=cds-AD08_RS04590;Parent=gene-AD08_RS04590;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=161124,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308756.1;locus_tag=AD08_RS04590;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000177.1 1 551 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000177.1 RefSeq region 1 551 . + . ID=NZ_JHDJ01000177.1:1..551;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000177.1 RefSeq gene 1 551 . + . ID=gene-AD08_RS04585;Name=AD08_RS04585;end_range=551,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04585;old_locus_tag=AD08_3819;partial=true;start_range=.,1 NZ_JHDJ01000177.1 Protein Homology CDS 1 551 . + 2 ID=cds-WP_162752719.1;Parent=gene-AD08_RS04585;Dbxref=Genbank:WP_162752719.1;Name=WP_162752719.1;end_range=551,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AD08_RS04585;partial=true;product=RHS repeat protein;protein_id=WP_162752719.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JHDJ01000178.1 1 42946 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000178.1 RefSeq region 1 42946 . + . ID=NZ_JHDJ01000178.1:1..42946;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000178.1 RefSeq gene 71 781 . + . ID=gene-AD08_RS04580;Name=AD08_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04580;old_locus_tag=AD08_3820 NZ_JHDJ01000178.1 Protein Homology CDS 71 781 . + 0 ID=cds-WP_162752720.1;Parent=gene-AD08_RS04580;Dbxref=Genbank:WP_162752720.1;Name=WP_162752720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001584008.1;locus_tag=AD08_RS04580;product=DUF4329 domain-containing protein;protein_id=WP_162752720.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 753 1136 . + . ID=gene-AD08_RS0126800;Name=yhhH;gbkey=Gene;gene=yhhH;gene_biotype=protein_coding;locus_tag=AD08_RS0126800 NZ_JHDJ01000178.1 Protein Homology CDS 753 1136 . + 0 ID=cds-WP_032219310.1;Parent=gene-AD08_RS0126800;Dbxref=Genbank:WP_032219310.1;Name=WP_032219310.1;gbkey=CDS;gene=yhhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417940.2;locus_tag=AD08_RS0126800;product=protein YhhH;protein_id=WP_032219310.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 1226 1486 . + . ID=gene-AD08_RS0126805;Name=AD08_RS0126805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126805 NZ_JHDJ01000178.1 Protein Homology CDS 1226 1486 . + 0 ID=cds-WP_000453654.1;Parent=gene-AD08_RS0126805;Dbxref=Genbank:WP_000453654.1;Name=WP_000453654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334888.1;locus_tag=AD08_RS0126805;product=hypothetical protein;protein_id=WP_000453654.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 1732 2868 . + . ID=gene-AD08_RS04575;Name=AD08_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04575;old_locus_tag=AD08_3821 NZ_JHDJ01000178.1 Protein Homology CDS 1732 2868 . + 0 ID=cds-WP_000420980.1;Parent=gene-AD08_RS04575;Dbxref=Genbank:WP_000420980.1;Name=WP_000420980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD08_RS04575;product=ISAs1-like element ISEc1 family transposase;protein_id=WP_000420980.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 3033 4157 . - . ID=gene-AD08_RS04570;Name=AD08_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04570;old_locus_tag=AD08_3822 NZ_JHDJ01000178.1 Protein Homology CDS 3033 4157 . - 0 ID=cds-WP_001216257.1;Parent=gene-AD08_RS04570;Dbxref=Genbank:WP_001216257.1;Name=WP_001216257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709253.2;locus_tag=AD08_RS04570;product=ABC-2 transporter permease;protein_id=WP_001216257.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 4157 6892 . - . ID=gene-AD08_RS04565;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=AD08_RS04565;old_locus_tag=AD08_3823 NZ_JHDJ01000178.1 Protein Homology CDS 4157 6892 . - 0 ID=cds-WP_032219311.1;Parent=gene-AD08_RS04565;Dbxref=Genbank:WP_032219311.1;Name=WP_032219311.1;gbkey=CDS;gene=rbbA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026225.1;locus_tag=AD08_RS04565;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_032219311.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 6889 7956 . - . ID=gene-AD08_RS04560;Name=AD08_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04560;old_locus_tag=AD08_3824 NZ_JHDJ01000178.1 Protein Homology CDS 6889 7956 . - 0 ID=cds-WP_032219312.1;Parent=gene-AD08_RS04560;Dbxref=Genbank:WP_032219312.1;Name=WP_032219312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312387.1;locus_tag=AD08_RS04560;product=HlyD family secretion protein;protein_id=WP_032219312.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 8322 9944 . - . ID=gene-AD08_RS04555;Name=AD08_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04555;old_locus_tag=AD08_3825 NZ_JHDJ01000178.1 Protein Homology CDS 8322 9944 . - 0 ID=cds-WP_032219314.1;Parent=gene-AD08_RS04555;Dbxref=Genbank:WP_032219314.1;Name=WP_032219314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417945.1;locus_tag=AD08_RS04555;product=YhiJ/YhiL family protein;protein_id=WP_032219314.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 10206 11813 . - . ID=gene-AD08_RS04550;Name=AD08_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04550;old_locus_tag=AD08_3826 NZ_JHDJ01000178.1 Protein Homology CDS 10206 11813 . - 0 ID=cds-WP_000643701.1;Parent=gene-AD08_RS04550;Dbxref=Genbank:WP_000643701.1;Name=WP_000643701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016248132.1;locus_tag=AD08_RS04550;product=YhiJ/YhiL family protein;protein_id=WP_000643701.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 12196 13248 . + . ID=gene-AD08_RS04540;Name=AD08_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04540;old_locus_tag=AD08_3829 NZ_JHDJ01000178.1 Protein Homology CDS 12196 13248 . + 0 ID=cds-WP_001028905.1;Parent=gene-AD08_RS04540;Dbxref=Genbank:WP_001028905.1;Name=WP_001028905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417948.4;locus_tag=AD08_RS04540;product=DUF2776 domain-containing protein;protein_id=WP_001028905.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 13563 14765 . - . ID=gene-AD08_RS04535;Name=AD08_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04535;old_locus_tag=AD08_3830 NZ_JHDJ01000178.1 Protein Homology CDS 13563 14765 . - 0 ID=cds-WP_000439170.1;Parent=gene-AD08_RS04535;Dbxref=Genbank:WP_000439170.1;Name=WP_000439170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417949.1;locus_tag=AD08_RS04535;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000439170.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 14997 16496 . + . ID=gene-AD08_RS04530;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=AD08_RS04530;old_locus_tag=AD08_3831 NZ_JHDJ01000178.1 Protein Homology CDS 14997 16496 . + 0 ID=cds-WP_000902780.1;Parent=gene-AD08_RS04530;Dbxref=Genbank:WP_000902780.1;Name=WP_000902780.1;gbkey=CDS;gene=pitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312392.1;locus_tag=AD08_RS04530;product=inorganic phosphate transporter PitA;protein_id=WP_000902780.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 16740 17075 . - . ID=gene-AD08_RS0126815;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=AD08_RS0126815 NZ_JHDJ01000178.1 Protein Homology CDS 16740 17075 . - 0 ID=cds-WP_000626187.1;Parent=gene-AD08_RS0126815;Dbxref=Genbank:WP_000626187.1;Name=WP_000626187.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312393.1;locus_tag=AD08_RS0126815;product=universal stress protein UspB;protein_id=WP_000626187.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 17466 17900 . + . ID=gene-AD08_RS04525;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=AD08_RS04525;old_locus_tag=AD08_3833 NZ_JHDJ01000178.1 Protein Homology CDS 17466 17900 . + 0 ID=cds-WP_001626949.1;Parent=gene-AD08_RS04525;Dbxref=Genbank:WP_001626949.1;Name=WP_001626949.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312394.1;locus_tag=AD08_RS04525;product=universal stress protein UspA;protein_id=WP_001626949.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 18217 19686 . + . ID=gene-AD08_RS04520;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=AD08_RS04520;old_locus_tag=AD08_3834 NZ_JHDJ01000178.1 Protein Homology CDS 18217 19686 . + 0 ID=cds-WP_001098652.1;Parent=gene-AD08_RS04520;Dbxref=Genbank:WP_001098652.1;Name=WP_001098652.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417953.1;locus_tag=AD08_RS04520;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098652.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 19735 20487 . - . ID=gene-AD08_RS04515;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=AD08_RS04515;old_locus_tag=AD08_3835 NZ_JHDJ01000178.1 Protein Homology CDS 19735 20487 . - 0 ID=cds-WP_000686620.1;Parent=gene-AD08_RS04515;Dbxref=Genbank:WP_000686620.1;Name=WP_000686620.1;gbkey=CDS;gene=rsmJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312396.1;locus_tag=AD08_RS04515;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_000686620.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 20495 22537 . - . ID=gene-AD08_RS04510;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=AD08_RS04510;old_locus_tag=AD08_3836 NZ_JHDJ01000178.1 Protein Homology CDS 20495 22537 . - 0 ID=cds-WP_001298719.1;Parent=gene-AD08_RS04510;Dbxref=Genbank:WP_001298719.1;Name=WP_001298719.1;gbkey=CDS;gene=prlC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417955.1;locus_tag=AD08_RS04510;product=oligopeptidase A;protein_id=WP_001298719.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 22740 23582 . + . ID=gene-AD08_RS04505;Name=AD08_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04505;old_locus_tag=AD08_3837 NZ_JHDJ01000178.1 Protein Homology CDS 22740 23582 . + 0 ID=cds-WP_001300574.1;Parent=gene-AD08_RS04505;Dbxref=Genbank:WP_001300574.1;Name=WP_001300574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417956.1;locus_tag=AD08_RS04505;product=23S rRNA (adenine(2030)-N(6))-methyltransferase;protein_id=WP_001300574.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 23654 25006 . + . ID=gene-AD08_RS04500;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=AD08_RS04500;old_locus_tag=AD08_3838 NZ_JHDJ01000178.1 Protein Homology CDS 23654 25006 . + 0 ID=cds-WP_032219316.1;Parent=gene-AD08_RS04500;Dbxref=Genbank:WP_032219316.1;Name=WP_032219316.1;gbkey=CDS;gene=gorA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=AD08_RS04500;product=glutathione-disulfide reductase;protein_id=WP_032219316.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 25060 25143 . - . ID=gene-AD08_RS04495;Name=AD08_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04495;old_locus_tag=AD08_3839 NZ_JHDJ01000178.1 Protein Homology CDS 25060 25143 . - 0 ID=cds-WP_001295215.1;Parent=gene-AD08_RS04495;Dbxref=Genbank:WP_001295215.1;Name=WP_001295215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165328.2;locus_tag=AD08_RS04495;product=hypothetical protein;protein_id=WP_001295215.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 25883 26236 . + . ID=gene-AD08_RS04485;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=AD08_RS04485;old_locus_tag=AD08_3841 NZ_JHDJ01000178.1 Protein Homology CDS 25883 26236 . + 0 ID=cds-WP_000008957.1;Parent=gene-AD08_RS04485;Dbxref=Genbank:WP_000008957.1;Name=WP_000008957.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417958.1;locus_tag=AD08_RS04485;product=arsenical resistance operon transcriptional regulator ArsR;protein_id=WP_000008957.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 26290 27579 . + . ID=gene-AD08_RS04480;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=AD08_RS04480;old_locus_tag=AD08_3842 NZ_JHDJ01000178.1 Protein Homology CDS 26290 27579 . + 0 ID=cds-WP_000922639.1;Parent=gene-AD08_RS04480;Dbxref=Genbank:WP_000922639.1;Name=WP_000922639.1;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=AD08_RS04480;product=arsenite/antimonite:H(+) antiporter ArsB;protein_id=WP_000922639.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 27592 28017 . + . ID=gene-AD08_RS04475;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AD08_RS04475;old_locus_tag=AD08_3843 NZ_JHDJ01000178.1 Protein Homology CDS 27592 28017 . + 0 ID=cds-WP_032219319.1;Parent=gene-AD08_RS04475;Dbxref=Genbank:WP_032219319.1;Name=WP_032219319.1;gbkey=CDS;gene=arsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417960.1;locus_tag=AD08_RS04475;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_032219319.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 28646 29869 . + . ID=gene-AD08_RS04470;Name=AD08_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04470;old_locus_tag=AD08_3845 NZ_JHDJ01000178.1 Protein Homology CDS 28646 29869 . + 0 ID=cds-WP_032219321.1;Parent=gene-AD08_RS04470;Dbxref=Genbank:WP_032219321.1;Name=WP_032219321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709288.1;locus_tag=AD08_RS04470;product=hypothetical protein;protein_id=WP_032219321.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 30117 30683 . + . ID=gene-AD08_RS04465;Name=slp;gbkey=Gene;gene=slp;gene_biotype=protein_coding;locus_tag=AD08_RS04465;old_locus_tag=AD08_3846 NZ_JHDJ01000178.1 Protein Homology CDS 30117 30683 . + 0 ID=cds-WP_032219322.1;Parent=gene-AD08_RS04465;Dbxref=Genbank:WP_032219322.1;Name=WP_032219322.1;gbkey=CDS;gene=slp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312404.2;locus_tag=AD08_RS04465;product=outer membrane lipoprotein Slp;protein_id=WP_032219322.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 30839 31369 . + . ID=gene-AD08_RS04460;Name=AD08_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04460;old_locus_tag=AD08_3847 NZ_JHDJ01000178.1 Protein Homology CDS 30839 31369 . + 0 ID=cds-WP_000478619.1;Parent=gene-AD08_RS04460;Dbxref=Genbank:WP_000478619.1;Name=WP_000478619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417964.1;locus_tag=AD08_RS04460;product=helix-turn-helix transcriptional regulator;protein_id=WP_000478619.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 31411 32058 . - . ID=gene-AD08_RS04455;Name=AD08_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04455;old_locus_tag=AD08_3848 NZ_JHDJ01000178.1 Protein Homology CDS 31411 32058 . - 0 ID=cds-WP_001384526.1;Parent=gene-AD08_RS04455;Dbxref=Genbank:WP_001384526.1;Name=WP_001384526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417965.1;locus_tag=AD08_RS04455;product=MgtC/SapB family protein;protein_id=WP_001384526.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 32122 32448 . - . ID=gene-AD08_RS04450;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=AD08_RS04450;old_locus_tag=AD08_3849 NZ_JHDJ01000178.1 Protein Homology CDS 32122 32448 . - 0 ID=cds-WP_001298717.1;Parent=gene-AD08_RS04450;Dbxref=Genbank:WP_001298717.1;Name=WP_001298717.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417966.4;locus_tag=AD08_RS04450;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001298717.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 32564 32896 . - . ID=gene-AD08_RS04445;Name=hdeA;gbkey=Gene;gene=hdeA;gene_biotype=protein_coding;locus_tag=AD08_RS04445;old_locus_tag=AD08_3850 NZ_JHDJ01000178.1 Protein Homology CDS 32564 32896 . - 0 ID=cds-WP_000756550.1;Parent=gene-AD08_RS04445;Dbxref=Genbank:WP_000756550.1;Name=WP_000756550.1;gbkey=CDS;gene=hdeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312417.1;locus_tag=AD08_RS04445;product=acid-activated periplasmic chaperone HdeA;protein_id=WP_000756550.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 33151 33723 . + . ID=gene-AD08_RS04440;Name=hdeD;gbkey=Gene;gene=hdeD;gene_biotype=protein_coding;locus_tag=AD08_RS04440;old_locus_tag=AD08_3851 NZ_JHDJ01000178.1 Protein Homology CDS 33151 33723 . + 0 ID=cds-WP_000965672.1;Parent=gene-AD08_RS04440;Dbxref=Genbank:WP_000965672.1;Name=WP_000965672.1;gbkey=CDS;gene=hdeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312418.1;locus_tag=AD08_RS04440;product=acid-resistance protein HdeD;protein_id=WP_000965672.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 34522 35049 . + . ID=gene-AD08_RS04435;Name=gadE;gbkey=Gene;gene=gadE;gene_biotype=protein_coding;locus_tag=AD08_RS04435;old_locus_tag=AD08_3852 NZ_JHDJ01000178.1 Protein Homology CDS 34522 35049 . + 0 ID=cds-WP_000576690.1;Parent=gene-AD08_RS04435;Dbxref=Genbank:WP_000576690.1;Name=WP_000576690.1;gbkey=CDS;gene=gadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312419.1;locus_tag=AD08_RS04435;product=acid resistance transcriptional activator GadE;protein_id=WP_000576690.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 35050 35328 . - . ID=gene-AD08_RS0126820;Name=AD08_RS0126820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126820 NZ_JHDJ01000178.1 Protein Homology CDS 35050 35328 . - 0 ID=cds-WP_001205329.1;Parent=gene-AD08_RS0126820;Dbxref=Genbank:WP_001205329.1;Name=WP_001205329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502656.1;locus_tag=AD08_RS0126820;product=hypothetical protein;protein_id=WP_001205329.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 35388 36545 . + . ID=gene-AD08_RS04430;Name=mdtE;gbkey=Gene;gene=mdtE;gene_biotype=protein_coding;locus_tag=AD08_RS04430;old_locus_tag=AD08_3853 NZ_JHDJ01000178.1 Protein Homology CDS 35388 36545 . + 0 ID=cds-WP_001432980.1;Parent=gene-AD08_RS04430;Dbxref=Genbank:WP_001432980.1;Name=WP_001432980.1;gbkey=CDS;gene=mdtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417970.1;locus_tag=AD08_RS04430;product=multidrug transporter subunit MdtE;protein_id=WP_001432980.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 36570 39683 . + . ID=gene-AD08_RS04425;Name=AD08_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04425;old_locus_tag=AD08_3854 NZ_JHDJ01000178.1 Protein Homology CDS 36570 39683 . + 0 ID=cds-WP_032219324.1;Parent=gene-AD08_RS04425;Dbxref=Genbank:WP_032219324.1;Name=WP_032219324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417971.1;locus_tag=AD08_RS04425;product=multidrug efflux RND transporter permease subunit;protein_id=WP_032219324.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 40046 40774 . - . ID=gene-AD08_RS04420;Name=gadW;gbkey=Gene;gene=gadW;gene_biotype=protein_coding;locus_tag=AD08_RS04420;old_locus_tag=AD08_3855 NZ_JHDJ01000178.1 Protein Homology CDS 40046 40774 . - 0 ID=cds-WP_000149999.1;Parent=gene-AD08_RS04420;Dbxref=Genbank:WP_000149999.1;Name=WP_000149999.1;gbkey=CDS;gene=gadW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312422.1;locus_tag=AD08_RS04420;product=acid resistance transcriptional activator GadW;protein_id=WP_000149999.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq gene 41142 41966 . - . ID=gene-AD08_RS04415;Name=gadX;gbkey=Gene;gene=gadX;gene_biotype=protein_coding;locus_tag=AD08_RS04415;old_locus_tag=AD08_3856 NZ_JHDJ01000178.1 Protein Homology CDS 41142 41966 . - 0 ID=cds-WP_001191059.1;Parent=gene-AD08_RS04415;Dbxref=Genbank:WP_001191059.1;Name=WP_001191059.1;gbkey=CDS;gene=gadX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417973.1;locus_tag=AD08_RS04415;product=acid resistance transcriptional activator GadX;protein_id=WP_001191059.1;transl_table=11 NZ_JHDJ01000178.1 RefSeq pseudogene 42336 42946 . - . ID=gene-AD08_RS04410;Name=AD08_RS04410;end_range=42946,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS04410;old_locus_tag=AD08_3857;partial=true;pseudo=true NZ_JHDJ01000178.1 Protein Homology CDS 42336 42946 . - 2 ID=cds-AD08_RS04410;Parent=gene-AD08_RS04410;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=42946,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AD08_RS04410;partial=true;product=glutamate decarboxylase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000179.1 1 95366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000179.1 RefSeq region 1 95366 . + . ID=NZ_JHDJ01000179.1:1..95366;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000179.1 RefSeq gene 1 641 . - . ID=gene-AD08_RS04405;Name=AD08_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04405;old_locus_tag=AD08_3858;partial=true;start_range=.,1 NZ_JHDJ01000179.1 Protein Homology CDS 1 641 . - 0 ID=cds-WP_001478491.1;Parent=gene-AD08_RS04405;Dbxref=Genbank:WP_001478491.1;Name=WP_001478491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312424.1;locus_tag=AD08_RS04405;partial=true;product=hypothetical protein;protein_id=WP_001478491.1;start_range=.,1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 852 2249 . - . ID=gene-AD08_RS04400;Name=ccp;gbkey=Gene;gene=ccp;gene_biotype=protein_coding;locus_tag=AD08_RS04400;old_locus_tag=AD08_3859 NZ_JHDJ01000179.1 Protein Homology CDS 852 2249 . - 0 ID=cds-WP_000784827.1;Parent=gene-AD08_RS04400;Dbxref=Genbank:WP_000784827.1;Name=WP_000784827.1;gbkey=CDS;gene=ccp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417975.1;locus_tag=AD08_RS04400;product=cytochrome c peroxidase;protein_id=WP_000784827.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 2653 4302 . + . ID=gene-AD08_RS04395;Name=treF;gbkey=Gene;gene=treF;gene_biotype=protein_coding;locus_tag=AD08_RS04395;old_locus_tag=AD08_3861 NZ_JHDJ01000179.1 Protein Homology CDS 2653 4302 . + 0 ID=cds-WP_000934216.1;Parent=gene-AD08_RS04395;Dbxref=Genbank:WP_000934216.1;Name=WP_000934216.1;gbkey=CDS;gene=treF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312426.1;locus_tag=AD08_RS04395;product=alpha%2Calpha-trehalase TreF;protein_id=WP_000934216.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq pseudogene 4353 4956 . - . ID=gene-AD08_RS04390;Name=AD08_RS04390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS04390;old_locus_tag=AD08_3862;pseudo=true NZ_JHDJ01000179.1 Protein Homology CDS 4353 4956 . - 0 ID=cds-AD08_RS04390;Parent=gene-AD08_RS04390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417977.1;locus_tag=AD08_RS04390;product=response regulator transcription factor;pseudo=true;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 5404 6375 . + . ID=gene-AD08_RS04385;Name=AD08_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04385;old_locus_tag=AD08_3863 NZ_JHDJ01000179.1 Protein Homology CDS 5404 6375 . + 0 ID=cds-WP_024209302.1;Parent=gene-AD08_RS04385;Dbxref=Genbank:WP_024209302.1;Name=WP_024209302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709299.1;locus_tag=AD08_RS04385;product=LysR family transcriptional regulator;protein_id=WP_024209302.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 6424 7437 . + . ID=gene-AD08_RS04380;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=AD08_RS04380;old_locus_tag=AD08_3864 NZ_JHDJ01000179.1 Protein Homology CDS 6424 7437 . + 0 ID=cds-WP_032219331.1;Parent=gene-AD08_RS04380;Dbxref=Genbank:WP_032219331.1;Name=WP_032219331.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417979.1;locus_tag=AD08_RS04380;product=inner membrane protein YhjD;protein_id=WP_032219331.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 7848 9170 . + . ID=gene-AD08_RS04375;Name=AD08_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04375;old_locus_tag=AD08_3865 NZ_JHDJ01000179.1 Protein Homology CDS 7848 9170 . + 0 ID=cds-WP_001149003.1;Parent=gene-AD08_RS04375;Dbxref=Genbank:WP_001149003.1;Name=WP_001149003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417980.1;locus_tag=AD08_RS04375;product=MHS family MFS transporter;protein_id=WP_001149003.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 9352 11412 . - . ID=gene-AD08_RS04370;Name=AD08_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04370;old_locus_tag=AD08_3866 NZ_JHDJ01000179.1 Protein Homology CDS 9352 11412 . - 0 ID=cds-WP_001395433.1;Parent=gene-AD08_RS04370;Dbxref=Genbank:WP_001395433.1;Name=WP_001395433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417981.2;locus_tag=AD08_RS04370;product=AsmA family protein;protein_id=WP_001395433.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 11482 12249 . - . ID=gene-AD08_RS0126825;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=AD08_RS0126825 NZ_JHDJ01000179.1 Protein Homology CDS 11482 12249 . - 0 ID=cds-WP_001295219.1;Parent=gene-AD08_RS0126825;Dbxref=Genbank:WP_001295219.1;Name=WP_001295219.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417982.2;locus_tag=AD08_RS0126825;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_001295219.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 12481 13410 . + . ID=gene-AD08_RS04365;Name=AD08_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04365;old_locus_tag=AD08_3869 NZ_JHDJ01000179.1 Protein Homology CDS 12481 13410 . + 0 ID=cds-WP_000037562.1;Parent=gene-AD08_RS04365;Dbxref=Genbank:WP_000037562.1;Name=WP_000037562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417983.2;locus_tag=AD08_RS04365;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_000037562.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 13506 15002 . - . ID=gene-AD08_RS04360;Name=AD08_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04360;old_locus_tag=AD08_3870 NZ_JHDJ01000179.1 Protein Homology CDS 13506 15002 . - 0 ID=cds-WP_001163141.1;Parent=gene-AD08_RS04360;Dbxref=Genbank:WP_001163141.1;Name=WP_001163141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417984.1;locus_tag=AD08_RS04360;product=insulinase family protein;protein_id=WP_001163141.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 15223 16509 . - . ID=gene-AD08_RS04355;Name=AD08_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04355;old_locus_tag=AD08_3871 NZ_JHDJ01000179.1 Protein Homology CDS 15223 16509 . - 0 ID=cds-WP_000858214.1;Parent=gene-AD08_RS04355;Dbxref=Genbank:WP_000858214.1;Name=WP_000858214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417985.1;locus_tag=AD08_RS04355;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858214.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 16692 18680 . - . ID=gene-AD08_RS04350;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=AD08_RS04350;old_locus_tag=AD08_3873 NZ_JHDJ01000179.1 Protein Homology CDS 16692 18680 . - 0 ID=cds-WP_001266293.1;Parent=gene-AD08_RS04350;Dbxref=Genbank:WP_001266293.1;Name=WP_001266293.1;gbkey=CDS;gene=hmsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417986.4;locus_tag=AD08_RS04350;product=biofilm formation regulator HmsP;protein_id=WP_001266293.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 18762 22235 . - . ID=gene-AD08_RS04345;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=AD08_RS04345;old_locus_tag=AD08_3874 NZ_JHDJ01000179.1 Protein Homology CDS 18762 22235 . - 0 ID=cds-WP_001225124.1;Parent=gene-AD08_RS04345;Dbxref=Genbank:WP_001225124.1;Name=WP_001225124.1;gbkey=CDS;gene=bcsC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026226.4;locus_tag=AD08_RS04345;product=cellulose biosynthesis protein BcsC;protein_id=WP_001225124.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 22217 23323 . - . ID=gene-AD08_RS04340;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=AD08_RS04340;old_locus_tag=AD08_3875 NZ_JHDJ01000179.1 Protein Homology CDS 22217 23323 . - 0 ID=cds-WP_001311203.1;Parent=gene-AD08_RS04340;Dbxref=Genbank:WP_001311203.1;Name=WP_001311203.1;gbkey=CDS;gene=bcsZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417988.1;locus_tag=AD08_RS04340;product=cellulase;protein_id=WP_001311203.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 23330 25669 . - . ID=gene-AD08_RS04335;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=AD08_RS04335;old_locus_tag=AD08_3876 NZ_JHDJ01000179.1 Protein Homology CDS 23330 25669 . - 0 ID=cds-WP_000823624.1;Parent=gene-AD08_RS04335;Dbxref=Genbank:WP_000823624.1;Name=WP_000823624.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417989.1;locus_tag=AD08_RS04335;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_000823624.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 25680 28298 . - . ID=gene-AD08_RS04330;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=AD08_RS04330;old_locus_tag=AD08_3877 NZ_JHDJ01000179.1 Protein Homology CDS 25680 28298 . - 0 ID=cds-WP_000025892.1;Parent=gene-AD08_RS04330;Dbxref=Genbank:WP_000025892.1;Name=WP_000025892.1;gbkey=CDS;gene=bcsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417990.4;locus_tag=AD08_RS04330;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_000025892.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 28295 29047 . - . ID=gene-AD08_RS04325;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=AD08_RS04325;old_locus_tag=AD08_3878 NZ_JHDJ01000179.1 Protein Homology CDS 28295 29047 . - 0 ID=cds-WP_000279528.1;Parent=gene-AD08_RS04325;Dbxref=Genbank:WP_000279528.1;Name=WP_000279528.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709309.1;locus_tag=AD08_RS04325;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000279528.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 29059 29247 . - . ID=gene-AD08_RS04320;Name=AD08_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04320;old_locus_tag=AD08_3879 NZ_JHDJ01000179.1 Protein Homology CDS 29059 29247 . - 0 ID=cds-WP_001063318.1;Parent=gene-AD08_RS04320;Dbxref=Genbank:WP_001063318.1;Name=WP_001063318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417992.1;locus_tag=AD08_RS04320;product=hypothetical protein;protein_id=WP_001063318.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 29520 31091 . + . ID=gene-AD08_RS04315;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=AD08_RS04315;old_locus_tag=AD08_3880 NZ_JHDJ01000179.1 Protein Homology CDS 29520 31091 . + 0 ID=cds-WP_001204931.1;Parent=gene-AD08_RS04315;Dbxref=Genbank:WP_001204931.1;Name=WP_001204931.1;gbkey=CDS;gene=bcsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417993.1;locus_tag=AD08_RS04315;product=cellulose biosynthesis protein BcsE;protein_id=WP_001204931.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 31088 31279 . + . ID=gene-AD08_RS04310;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=AD08_RS04310;old_locus_tag=AD08_3881 NZ_JHDJ01000179.1 Protein Homology CDS 31088 31279 . + 0 ID=cds-WP_000988308.1;Parent=gene-AD08_RS04310;Dbxref=Genbank:WP_000988308.1;Name=WP_000988308.1;gbkey=CDS;gene=bcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417994.2;locus_tag=AD08_RS04310;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988308.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 31276 32955 . + . ID=gene-AD08_RS04305;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=AD08_RS04305;old_locus_tag=AD08_3882 NZ_JHDJ01000179.1 Protein Homology CDS 31276 32955 . + 0 ID=cds-WP_000191622.1;Parent=gene-AD08_RS04305;Dbxref=Genbank:WP_000191622.1;Name=WP_000191622.1;gbkey=CDS;gene=bcsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417995.1;locus_tag=AD08_RS04305;product=cellulose biosynthesis protein BcsG;protein_id=WP_000191622.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 33042 33149 . - . ID=gene-AD08_RS27385;Name=ldrD;gbkey=Gene;gene=ldrD;gene_biotype=protein_coding;locus_tag=AD08_RS27385 NZ_JHDJ01000179.1 Protein Homology CDS 33042 33149 . - 0 ID=cds-WP_000141634.1;Parent=gene-AD08_RS27385;Dbxref=Genbank:WP_000141634.1;Name=WP_000141634.1;gbkey=CDS;gene=ldrD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026227.1;locus_tag=AD08_RS27385;product=type I toxin-antitoxin system toxic polypeptide LdrD;protein_id=WP_000141634.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 33625 34896 . + . ID=gene-AD08_RS04295;Name=AD08_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04295;old_locus_tag=AD08_3885 NZ_JHDJ01000179.1 Protein Homology CDS 33625 34896 . + 0 ID=cds-WP_001295225.1;Parent=gene-AD08_RS04295;Dbxref=Genbank:WP_001295225.1;Name=WP_001295225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417996.1;locus_tag=AD08_RS04295;product=transporter;protein_id=WP_001295225.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 34926 35930 . - . ID=gene-AD08_RS04290;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=AD08_RS04290;old_locus_tag=AD08_3886 NZ_JHDJ01000179.1 Protein Homology CDS 34926 35930 . - 0 ID=cds-WP_000107012.1;Parent=gene-AD08_RS04290;Dbxref=Genbank:WP_000107012.1;Name=WP_000107012.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417997.1;locus_tag=AD08_RS04290;product=dipeptide ABC transporter ATP binding subunit DppF;protein_id=WP_000107012.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 35927 36910 . - . ID=gene-AD08_RS04285;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=AD08_RS04285;old_locus_tag=AD08_3887 NZ_JHDJ01000179.1 Protein Homology CDS 35927 36910 . - 0 ID=cds-WP_001196486.1;Parent=gene-AD08_RS04285;Dbxref=Genbank:WP_001196486.1;Name=WP_001196486.1;gbkey=CDS;gene=dppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312448.1;locus_tag=AD08_RS04285;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196486.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 36921 37823 . - . ID=gene-AD08_RS04280;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=AD08_RS04280;old_locus_tag=AD08_3888 NZ_JHDJ01000179.1 Protein Homology CDS 36921 37823 . - 0 ID=cds-WP_000084677.1;Parent=gene-AD08_RS04280;Dbxref=Genbank:WP_000084677.1;Name=WP_000084677.1;gbkey=CDS;gene=dppC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=AD08_RS04280;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084677.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 37833 38852 . - . ID=gene-AD08_RS04275;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=AD08_RS04275;old_locus_tag=AD08_3889 NZ_JHDJ01000179.1 Protein Homology CDS 37833 38852 . - 0 ID=cds-WP_032219334.1;Parent=gene-AD08_RS04275;Dbxref=Genbank:WP_032219334.1;Name=WP_032219334.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=AD08_RS04275;product=dipeptide ABC transporter permease DppB;protein_id=WP_032219334.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 38870 39097 . + . ID=gene-AD08_RS31800;Name=AD08_RS31800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31800;old_locus_tag=AD08_3890 NZ_JHDJ01000179.1 GeneMarkS-2+ CDS 38870 39097 . + 0 ID=cds-WP_001300936.1;Parent=gene-AD08_RS31800;Dbxref=Genbank:WP_001300936.1;Name=WP_001300936.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS31800;product=hypothetical protein;protein_id=WP_001300936.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 39160 40767 . - . ID=gene-AD08_RS04265;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=AD08_RS04265;old_locus_tag=AD08_3891 NZ_JHDJ01000179.1 Protein Homology CDS 39160 40767 . - 0 ID=cds-WP_001222883.1;Parent=gene-AD08_RS04265;Dbxref=Genbank:WP_001222883.1;Name=WP_001222883.1;gbkey=CDS;gene=dppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418001.1;locus_tag=AD08_RS04265;product=dipeptide ABC transporter substrate-binding protein DppA;protein_id=WP_001222883.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 41510 41586 . - . ID=gene-AD08_RS04260;Name=AD08_RS04260;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS04260;old_locus_tag=AD08_3893 NZ_JHDJ01000179.1 tRNAscan-SE tRNA 41510 41586 . - . ID=rna-AD08_RS04260;Parent=gene-AD08_RS04260;anticodon=(pos:complement(41550..41552));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS04260;product=tRNA-Pro NZ_JHDJ01000179.1 tRNAscan-SE exon 41510 41586 . - . ID=exon-AD08_RS04260-1;Parent=rna-AD08_RS04260;anticodon=(pos:complement(41550..41552));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS04260;product=tRNA-Pro NZ_JHDJ01000179.1 RefSeq gene 41678 43369 . - . ID=gene-AD08_RS04255;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=AD08_RS04255;old_locus_tag=AD08_3894 NZ_JHDJ01000179.1 Protein Homology CDS 41678 43369 . - 0 ID=cds-WP_001269197.1;Parent=gene-AD08_RS04255;Dbxref=Genbank:WP_001269197.1;Name=WP_001269197.1;gbkey=CDS;gene=eptB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418002.2;locus_tag=AD08_RS04255;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269197.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 43693 44901 . - . ID=gene-AD08_RS04250;Name=AD08_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04250;old_locus_tag=AD08_3895 NZ_JHDJ01000179.1 Protein Homology CDS 43693 44901 . - 0 ID=cds-WP_000189019.1;Parent=gene-AD08_RS04250;Dbxref=Genbank:WP_000189019.1;Name=WP_000189019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418003.1;locus_tag=AD08_RS04250;product=MFS transporter;protein_id=WP_000189019.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 45130 45828 . - . ID=gene-AD08_RS04245;Name=AD08_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04245;old_locus_tag=AD08_3896 NZ_JHDJ01000179.1 Protein Homology CDS 45130 45828 . - 0 ID=cds-WP_032219335.1;Parent=gene-AD08_RS04245;Dbxref=Genbank:WP_032219335.1;Name=WP_032219335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418004.4;locus_tag=AD08_RS04245;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_032219335.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 45986 46549 . + . ID=gene-AD08_RS04240;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=AD08_RS04240;old_locus_tag=AD08_3897 NZ_JHDJ01000179.1 Protein Homology CDS 45986 46549 . + 0 ID=cds-WP_001395000.1;Parent=gene-AD08_RS04240;Dbxref=Genbank:WP_001395000.1;Name=WP_001395000.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418005.1;locus_tag=AD08_RS04240;product=DNA-3-methyladenine glycosylase I;protein_id=WP_001395000.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 46546 46986 . + . ID=gene-AD08_RS04235;Name=AD08_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04235;old_locus_tag=AD08_3898 NZ_JHDJ01000179.1 Protein Homology CDS 46546 46986 . + 0 ID=cds-WP_000617473.1;Parent=gene-AD08_RS04235;Dbxref=Genbank:WP_000617473.1;Name=WP_000617473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418006.1;locus_tag=AD08_RS04235;product=N-acetyltransferase;protein_id=WP_000617473.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 46955 49288 . - . ID=gene-AD08_RS04230;Name=AD08_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04230;old_locus_tag=AD08_3899 NZ_JHDJ01000179.1 Protein Homology CDS 46955 49288 . - 0 ID=cds-WP_000013950.1;Parent=gene-AD08_RS04230;Dbxref=Genbank:WP_000013950.1;Name=WP_000013950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418007.3;locus_tag=AD08_RS04230;product=biotin sulfoxide reductase;protein_id=WP_000013950.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 49441 50100 . + . ID=gene-AD08_RS04225;Name=AD08_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04225;old_locus_tag=AD08_3900 NZ_JHDJ01000179.1 Protein Homology CDS 49441 50100 . + 0 ID=cds-WP_001513384.1;Parent=gene-AD08_RS04225;Dbxref=Genbank:WP_001513384.1;Name=WP_001513384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312464.1;locus_tag=AD08_RS04225;product=OmpA family lipoprotein;protein_id=WP_001513384.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 50204 51178 . + . ID=gene-AD08_RS04220;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=AD08_RS04220;old_locus_tag=AD08_3901 NZ_JHDJ01000179.1 Protein Homology CDS 50204 51178 . + 0 ID=cds-WP_000805038.1;Parent=gene-AD08_RS04220;Dbxref=Genbank:WP_000805038.1;Name=WP_000805038.1;gbkey=CDS;gene=ghrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418009.2;locus_tag=AD08_RS04220;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000805038.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 51228 51938 . - . ID=gene-AD08_RS04215;Name=AD08_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04215;old_locus_tag=AD08_3902 NZ_JHDJ01000179.1 Protein Homology CDS 51228 51938 . - 0 ID=cds-WP_032219338.1;Parent=gene-AD08_RS04215;Dbxref=Genbank:WP_032219338.1;Name=WP_032219338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418010.2;locus_tag=AD08_RS04215;product=DUF3053 domain-containing protein;protein_id=WP_032219338.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 52372 52662 . + . ID=gene-AD08_RS04210;Name=AD08_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04210;old_locus_tag=AD08_3903 NZ_JHDJ01000179.1 Protein Homology CDS 52372 52662 . + 0 ID=cds-WP_000455798.1;Parent=gene-AD08_RS04210;Dbxref=Genbank:WP_000455798.1;Name=WP_000455798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312467.1;locus_tag=AD08_RS04210;product=HTH-type transcriptional regulator;protein_id=WP_000455798.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 52943 53155 . + . ID=gene-AD08_RS04205;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=AD08_RS04205;old_locus_tag=AD08_3904 NZ_JHDJ01000179.1 Protein Homology CDS 52943 53155 . + 0 ID=cds-WP_000014594.1;Parent=gene-AD08_RS04205;Dbxref=Genbank:WP_000014594.1;Name=WP_000014594.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=AD08_RS04205;product=RNA chaperone/antiterminator CspA;protein_id=WP_000014594.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 53342 53494 . - . ID=gene-AD08_RS04200;Name=hokA;gbkey=Gene;gene=hokA;gene_biotype=protein_coding;locus_tag=AD08_RS04200;old_locus_tag=AD08_3905 NZ_JHDJ01000179.1 Protein Homology CDS 53342 53494 . - 0 ID=cds-WP_001135732.1;Parent=gene-AD08_RS04200;Dbxref=Genbank:WP_001135732.1;Name=WP_001135732.1;gbkey=CDS;gene=hokA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135724.1;locus_tag=AD08_RS04200;product=type I toxin-antitoxin system toxin HokA;protein_id=WP_001135732.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 53574 54943 . + . ID=gene-AD08_RS30750;Name=AD08_RS30750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30750 NZ_JHDJ01000179.1 Protein Homology CDS 53574 54054 . + 0 ID=cds-WP_085947770.1;Parent=gene-AD08_RS30750;Dbxref=Genbank:WP_085947770.1;Name=WP_085947770.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AD08_RS30750;product=IS3-like element IS150 family transposase;protein_id=WP_085947770.1;transl_table=11 NZ_JHDJ01000179.1 Protein Homology CDS 54054 54943 . + 2 ID=cds-WP_085947770.1;Parent=gene-AD08_RS30750;Dbxref=Genbank:WP_085947770.1;Name=WP_085947770.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AD08_RS30750;product=IS3-like element IS150 family transposase;protein_id=WP_085947770.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 55222 57291 . - . ID=gene-AD08_RS04185;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=AD08_RS04185;old_locus_tag=AD08_3908 NZ_JHDJ01000179.1 Protein Homology CDS 55222 57291 . - 0 ID=cds-WP_001291772.1;Parent=gene-AD08_RS04185;Dbxref=Genbank:WP_001291772.1;Name=WP_001291772.1;gbkey=CDS;gene=glyS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=AD08_RS04185;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291772.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 57301 58212 . - . ID=gene-AD08_RS04180;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=AD08_RS04180;old_locus_tag=AD08_3909 NZ_JHDJ01000179.1 Protein Homology CDS 57301 58212 . - 0 ID=cds-WP_001168544.1;Parent=gene-AD08_RS04180;Dbxref=Genbank:WP_001168544.1;Name=WP_001168544.1;gbkey=CDS;gene=glyQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312470.1;locus_tag=AD08_RS04180;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168544.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 58307 58606 . - . ID=gene-AD08_RS04175;Name=AD08_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04175;old_locus_tag=AD08_3910 NZ_JHDJ01000179.1 Protein Homology CDS 58307 58606 . - 0 ID=cds-WP_000980107.1;Parent=gene-AD08_RS04175;Dbxref=Genbank:WP_000980107.1;Name=WP_000980107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588469.1;locus_tag=AD08_RS04175;product=hypothetical protein;protein_id=WP_000980107.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 58781 59776 . + . ID=gene-AD08_RS04170;Name=AD08_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04170;old_locus_tag=AD08_3911 NZ_JHDJ01000179.1 Protein Homology CDS 58781 59776 . + 0 ID=cds-WP_001182650.1;Parent=gene-AD08_RS04170;Dbxref=Genbank:WP_001182650.1;Name=WP_001182650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418018.1;locus_tag=AD08_RS04170;product=O-acetyltransferase WecH;protein_id=WP_001182650.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 59818 60255 . - . ID=gene-AD08_RS04165;Name=AD08_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04165;old_locus_tag=AD08_3912 NZ_JHDJ01000179.1 Protein Homology CDS 59818 60255 . - 0 ID=cds-WP_001296808.1;Parent=gene-AD08_RS04165;Dbxref=Genbank:WP_001296808.1;Name=WP_001296808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312472.2;locus_tag=AD08_RS04165;product=YiaB family inner membrane protein;protein_id=WP_001296808.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 60301 60642 . - . ID=gene-AD08_RS04160;Name=AD08_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04160;old_locus_tag=AD08_3913 NZ_JHDJ01000179.1 Protein Homology CDS 60301 60642 . - 0 ID=cds-WP_001295228.1;Parent=gene-AD08_RS04160;Dbxref=Genbank:WP_001295228.1;Name=WP_001295228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418020.2;locus_tag=AD08_RS04160;product=hypothetical protein;protein_id=WP_001295228.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 60811 62265 . - . ID=gene-AD08_RS04155;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=AD08_RS04155;old_locus_tag=AD08_3914 NZ_JHDJ01000179.1 Protein Homology CDS 60811 62265 . - 0 ID=cds-WP_000275334.1;Parent=gene-AD08_RS04155;Dbxref=Genbank:WP_000275334.1;Name=WP_000275334.1;gbkey=CDS;gene=xylB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418021.1;locus_tag=AD08_RS04155;product=xylulokinase;protein_id=WP_000275334.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 62337 63659 . - . ID=gene-AD08_RS04150;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=AD08_RS04150;old_locus_tag=AD08_3915 NZ_JHDJ01000179.1 Protein Homology CDS 62337 63659 . - 0 ID=cds-WP_001149591.1;Parent=gene-AD08_RS04150;Dbxref=Genbank:WP_001149591.1;Name=WP_001149591.1;gbkey=CDS;gene=xylA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418022.1;locus_tag=AD08_RS04150;product=xylose isomerase;protein_id=WP_001149591.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 64025 65017 . + . ID=gene-AD08_RS04145;Name=AD08_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04145;old_locus_tag=AD08_3916 NZ_JHDJ01000179.1 Protein Homology CDS 64025 65017 . + 0 ID=cds-WP_000694881.1;Parent=gene-AD08_RS04145;Dbxref=Genbank:WP_000694881.1;Name=WP_000694881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418023.1;locus_tag=AD08_RS04145;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_000694881.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 65095 66636 . + . ID=gene-AD08_RS04140;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;locus_tag=AD08_RS04140;old_locus_tag=AD08_3917 NZ_JHDJ01000179.1 Protein Homology CDS 65095 66636 . + 0 ID=cds-WP_001146479.1;Parent=gene-AD08_RS04140;Dbxref=Genbank:WP_001146479.1;Name=WP_001146479.1;gbkey=CDS;gene=xylG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312477.1;locus_tag=AD08_RS04140;product=D-xylose ABC transporter ATP-binding protein;protein_id=WP_001146479.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 66614 67795 . + . ID=gene-AD08_RS04135;Name=xylH;gbkey=Gene;gene=xylH;gene_biotype=protein_coding;locus_tag=AD08_RS04135;old_locus_tag=AD08_3918 NZ_JHDJ01000179.1 Protein Homology CDS 66614 67795 . + 0 ID=cds-WP_000045990.1;Parent=gene-AD08_RS04135;Dbxref=Genbank:WP_000045990.1;Name=WP_000045990.1;gbkey=CDS;gene=xylH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312478.1;locus_tag=AD08_RS04135;product=xylose ABC transporter permease XylH;protein_id=WP_000045990.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 67873 69051 . + . ID=gene-AD08_RS04130;Name=AD08_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04130;old_locus_tag=AD08_3919 NZ_JHDJ01000179.1 Protein Homology CDS 67873 69051 . + 0 ID=cds-WP_032219340.1;Parent=gene-AD08_RS04130;Dbxref=Genbank:WP_032219340.1;Name=WP_032219340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312479.1;locus_tag=AD08_RS04130;product=DNA-binding transcriptional regulator XylR;protein_id=WP_032219340.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 69247 70071 . - . ID=gene-AD08_RS0126845;Name=AD08_RS0126845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126845 NZ_JHDJ01000179.1 Protein Homology CDS 69247 70071 . - 0 ID=cds-WP_001297957.1;Parent=gene-AD08_RS0126845;Dbxref=Genbank:WP_001297957.1;Name=WP_001297957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026230.1;locus_tag=AD08_RS0126845;product=protein bax;protein_id=WP_001297957.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 70391 72421 . + . ID=gene-AD08_RS04125;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=AD08_RS04125;old_locus_tag=AD08_3921 NZ_JHDJ01000179.1 Protein Homology CDS 70391 72421 . + 0 ID=cds-WP_032219342.1;Parent=gene-AD08_RS04125;Dbxref=Genbank:WP_032219342.1;Name=WP_032219342.1;gbkey=CDS;gene=malS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418028.1;locus_tag=AD08_RS04125;product=alpha-amylase;protein_id=WP_032219342.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 72599 73852 . + . ID=gene-AD08_RS04120;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=AD08_RS04120;old_locus_tag=AD08_3922 NZ_JHDJ01000179.1 Protein Homology CDS 72599 73852 . + 0 ID=cds-WP_000144361.1;Parent=gene-AD08_RS04120;Dbxref=Genbank:WP_000144361.1;Name=WP_000144361.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026231.1;locus_tag=AD08_RS04120;product=valine--pyruvate transaminase;protein_id=WP_000144361.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 74003 74476 . - . ID=gene-AD08_RS04115;Name=AD08_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04115;old_locus_tag=AD08_3923 NZ_JHDJ01000179.1 Protein Homology CDS 74003 74476 . - 0 ID=cds-WP_001300918.1;Parent=gene-AD08_RS04115;Dbxref=Genbank:WP_001300918.1;Name=WP_001300918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418030.1;locus_tag=AD08_RS04115;product=4Fe-4S binding protein;protein_id=WP_001300918.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 74578 75426 . - . ID=gene-AD08_RS04110;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=AD08_RS04110;old_locus_tag=AD08_3924 NZ_JHDJ01000179.1 Protein Homology CDS 74578 75426 . - 0 ID=cds-WP_000514240.1;Parent=gene-AD08_RS04110;Dbxref=Genbank:WP_000514240.1;Name=WP_000514240.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418031.1;locus_tag=AD08_RS04110;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000514240.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 75628 76626 . + . ID=gene-AD08_RS04105;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=AD08_RS04105;old_locus_tag=AD08_3925 NZ_JHDJ01000179.1 Protein Homology CDS 75628 76626 . + 0 ID=cds-WP_000869037.1;Parent=gene-AD08_RS04105;Dbxref=Genbank:WP_000869037.1;Name=WP_000869037.1;gbkey=CDS;gene=yiaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418032.1;locus_tag=AD08_RS04105;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869037.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 76638 77105 . + . ID=gene-AD08_RS04100;Name=AD08_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04100;old_locus_tag=AD08_3926 NZ_JHDJ01000179.1 Protein Homology CDS 76638 77105 . + 0 ID=cds-WP_000576079.1;Parent=gene-AD08_RS04100;Dbxref=Genbank:WP_000576079.1;Name=WP_000576079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418033.1;locus_tag=AD08_RS04100;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576079.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 77233 77697 . + . ID=gene-AD08_RS0126855;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=AD08_RS0126855 NZ_JHDJ01000179.1 Protein Homology CDS 77233 77697 . + 0 ID=cds-WP_032148054.1;Parent=gene-AD08_RS0126855;Dbxref=Genbank:WP_032148054.1;Name=WP_032148054.1;gbkey=CDS;gene=yiaM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000470451.1;locus_tag=AD08_RS0126855;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_032148054.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 77700 78977 . + . ID=gene-AD08_RS04095;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=AD08_RS04095;old_locus_tag=AD08_3928 NZ_JHDJ01000179.1 Protein Homology CDS 77700 78977 . + 0 ID=cds-WP_000279599.1;Parent=gene-AD08_RS04095;Dbxref=Genbank:WP_000279599.1;Name=WP_000279599.1;gbkey=CDS;gene=yiaN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026232.1;locus_tag=AD08_RS04095;product=2%2C3-diketo-L-gulonate transporter large permease YiaN;protein_id=WP_000279599.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 78990 79976 . + . ID=gene-AD08_RS04090;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=AD08_RS04090;old_locus_tag=AD08_3929 NZ_JHDJ01000179.1 Protein Homology CDS 78990 79976 . + 0 ID=cds-WP_032219344.1;Parent=gene-AD08_RS04090;Dbxref=Genbank:WP_032219344.1;Name=WP_032219344.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418036.1;locus_tag=AD08_RS04090;product=2%2C3-diketo-L-gulonate transporter substrate-binding protein YiaO;protein_id=WP_032219344.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 79980 81476 . + . ID=gene-AD08_RS04085;Name=lyxK;gbkey=Gene;gene=lyxK;gene_biotype=protein_coding;locus_tag=AD08_RS04085;old_locus_tag=AD08_3930 NZ_JHDJ01000179.1 Protein Homology CDS 79980 81476 . + 0 ID=cds-WP_000196054.1;Parent=gene-AD08_RS04085;Dbxref=Genbank:WP_000196054.1;Name=WP_000196054.1;gbkey=CDS;gene=lyxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418037.1;locus_tag=AD08_RS04085;product=L-xylulokinase;protein_id=WP_000196054.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 81473 82135 . + . ID=gene-AD08_RS04080;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=AD08_RS04080;old_locus_tag=AD08_3931 NZ_JHDJ01000179.1 Protein Homology CDS 81473 82135 . + 0 ID=cds-WP_001521852.1;Parent=gene-AD08_RS04080;Dbxref=Genbank:WP_001521852.1;Name=WP_001521852.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418038.1;locus_tag=AD08_RS04080;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_001521852.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 82128 82988 . + . ID=gene-AD08_RS04075;Name=AD08_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04075;old_locus_tag=AD08_3932 NZ_JHDJ01000179.1 Protein Homology CDS 82128 82988 . + 0 ID=cds-WP_001295230.1;Parent=gene-AD08_RS04075;Dbxref=Genbank:WP_001295230.1;Name=WP_001295230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418039.2;locus_tag=AD08_RS04075;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_001295230.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 82982 83677 . + . ID=gene-AD08_RS04070;Name=AD08_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04070;old_locus_tag=AD08_3933 NZ_JHDJ01000179.1 Protein Homology CDS 82982 83677 . + 0 ID=cds-WP_000893142.1;Parent=gene-AD08_RS04070;Dbxref=Genbank:WP_000893142.1;Name=WP_000893142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418040.1;locus_tag=AD08_RS04070;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000893142.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq pseudogene 83814 84002 . + . ID=gene-AD08_RS31370;Name=AD08_RS31370;end_range=84002,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31370;partial=true;pseudo=true;start_range=.,83814 NZ_JHDJ01000179.1 Protein Homology CDS 83814 84002 . + 0 ID=cds-AD08_RS31370;Parent=gene-AD08_RS31370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=84002,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312486.1;locus_tag=AD08_RS31370;partial=true;product=hypothetical protein;pseudo=true;start_range=.,83814;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 84024 84764 . - . ID=gene-AD08_RS04065;Name=AD08_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04065;old_locus_tag=AD08_3934 NZ_JHDJ01000179.1 Protein Homology CDS 84024 84764 . - 0 ID=cds-WP_000906819.1;Parent=gene-AD08_RS04065;Dbxref=Genbank:WP_000906819.1;Name=WP_000906819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418041.1;locus_tag=AD08_RS04065;product=MipA/OmpV family protein;protein_id=WP_000906819.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 84888 85862 . + . ID=gene-AD08_RS04060;Name=AD08_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04060;old_locus_tag=AD08_3935 NZ_JHDJ01000179.1 Protein Homology CDS 84888 85862 . + 0 ID=cds-WP_032219346.1;Parent=gene-AD08_RS04060;Dbxref=Genbank:WP_032219346.1;Name=WP_032219346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418042.1;locus_tag=AD08_RS04060;product=LysR family transcriptional regulator;protein_id=WP_032219346.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 85859 86995 . - . ID=gene-AD08_RS04055;Name=AD08_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04055;old_locus_tag=AD08_3936 NZ_JHDJ01000179.1 Protein Homology CDS 85859 86995 . - 0 ID=cds-WP_000364884.1;Parent=gene-AD08_RS04055;Dbxref=Genbank:WP_000364884.1;Name=WP_000364884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418043.1;locus_tag=AD08_RS04055;product=HlyD family secretion protein;protein_id=WP_000364884.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 87001 87324 . - . ID=gene-AD08_RS04050;Name=AD08_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04050;old_locus_tag=AD08_3937 NZ_JHDJ01000179.1 Protein Homology CDS 87001 87324 . - 0 ID=cds-WP_000478195.1;Parent=gene-AD08_RS04050;Dbxref=Genbank:WP_000478195.1;Name=WP_000478195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312490.1;locus_tag=AD08_RS04050;product=DUF3302 domain-containing protein;protein_id=WP_000478195.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 87495 87650 . + . ID=gene-AD08_RS04045;Name=AD08_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04045;old_locus_tag=AD08_3938 NZ_JHDJ01000179.1 GeneMarkS-2+ CDS 87495 87650 . + 0 ID=cds-WP_001296793.1;Parent=gene-AD08_RS04045;Dbxref=Genbank:WP_001296793.1;Name=WP_001296793.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS04045;product=hypothetical protein;protein_id=WP_001296793.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 87869 89407 . - . ID=gene-AD08_RS04040;Name=AD08_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04040;old_locus_tag=AD08_3939 NZ_JHDJ01000179.1 Protein Homology CDS 87869 89407 . - 0 ID=cds-WP_000183980.1;Parent=gene-AD08_RS04040;Dbxref=Genbank:WP_000183980.1;Name=WP_000183980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551836.1;locus_tag=AD08_RS04040;product=aldehyde dehydrogenase AldB;protein_id=WP_000183980.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 89572 90723 . - . ID=gene-AD08_RS04035;Name=yiaY;gbkey=Gene;gene=yiaY;gene_biotype=protein_coding;locus_tag=AD08_RS04035;old_locus_tag=AD08_3940 NZ_JHDJ01000179.1 Protein Homology CDS 89572 90723 . - 0 ID=cds-WP_000741518.1;Parent=gene-AD08_RS04035;Dbxref=Genbank:WP_000741518.1;Name=WP_000741518.1;gbkey=CDS;gene=yiaY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026233.1;locus_tag=AD08_RS04035;product=L-threonine dehydrogenase;protein_id=WP_000741518.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 90913 92757 . - . ID=gene-AD08_RS04030;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=AD08_RS04030;old_locus_tag=AD08_3941 NZ_JHDJ01000179.1 Protein Homology CDS 90913 92757 . - 0 ID=cds-WP_000582468.1;Parent=gene-AD08_RS04030;Dbxref=Genbank:WP_000582468.1;Name=WP_000582468.1;gbkey=CDS;gene=selB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418047.1;locus_tag=AD08_RS04030;product=selenocysteine-specific translation elongation factor;protein_id=WP_000582468.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 92754 94145 . - . ID=gene-AD08_RS04025;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=AD08_RS04025;old_locus_tag=AD08_3942 NZ_JHDJ01000179.1 Protein Homology CDS 92754 94145 . - 0 ID=cds-WP_000206275.1;Parent=gene-AD08_RS04025;Dbxref=Genbank:WP_000206275.1;Name=WP_000206275.1;gbkey=CDS;gene=selA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312495.1;locus_tag=AD08_RS04025;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_000206275.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq gene 94243 94851 . - . ID=gene-AD08_RS04020;Name=AD08_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04020;old_locus_tag=AD08_3943 NZ_JHDJ01000179.1 Protein Homology CDS 94243 94851 . - 0 ID=cds-WP_000779792.1;Parent=gene-AD08_RS04020;Dbxref=Genbank:WP_000779792.1;Name=WP_000779792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418049.1;locus_tag=AD08_RS04020;product=glutathione S-transferase;protein_id=WP_000779792.1;transl_table=11 NZ_JHDJ01000179.1 RefSeq pseudogene 95079 95366 . + . ID=gene-AD08_RS04015;Name=AD08_RS04015;end_range=95366,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS04015;old_locus_tag=AD08_3945;partial=true;pseudo=true NZ_JHDJ01000179.1 Protein Homology CDS 95079 95366 . + 0 ID=cds-AD08_RS04015;Parent=gene-AD08_RS04015;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=95366,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308756.1;locus_tag=AD08_RS04015;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000180.1 1 129231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000180.1 RefSeq region 1 129231 . + . ID=NZ_JHDJ01000180.1:1..129231;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000180.1 RefSeq gene 71 679 . + . ID=gene-AD08_RS04010;Name=AD08_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04010;old_locus_tag=AD08_3946 NZ_JHDJ01000180.1 Protein Homology CDS 71 679 . + 0 ID=cds-WP_071597403.1;Parent=gene-AD08_RS04010;Dbxref=Genbank:WP_071597403.1;Name=WP_071597403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001405736.1;locus_tag=AD08_RS04010;product=protein rhsA;protein_id=WP_071597403.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 700 1542 . + . ID=gene-AD08_RS04005;Name=AD08_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS04005;old_locus_tag=AD08_3947 NZ_JHDJ01000180.1 Protein Homology CDS 700 1542 . + 0 ID=cds-WP_000072850.1;Parent=gene-AD08_RS04005;Dbxref=Genbank:WP_000072850.1;Name=WP_000072850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418051.1;locus_tag=AD08_RS04005;product=hypothetical protein;protein_id=WP_000072850.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 1695 2528 . + . ID=gene-AD08_RS31805;Name=AD08_RS31805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31805;old_locus_tag=AD08_3948 NZ_JHDJ01000180.1 Protein Homology CDS 1695 2528 . + 0 ID=cds-WP_063121680.1;Parent=gene-AD08_RS31805;Dbxref=Genbank:WP_063121680.1;Name=WP_063121680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001359919.1;locus_tag=AD08_RS31805;product=RHS repeat protein;protein_id=WP_063121680.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 2540 3001 . + . ID=gene-AD08_RS0126860;Name=AD08_RS0126860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126860 NZ_JHDJ01000180.1 Protein Homology CDS 2540 3001 . + 0 ID=cds-WP_000642478.1;Parent=gene-AD08_RS0126860;Dbxref=Genbank:WP_000642478.1;Name=WP_000642478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418053.1;locus_tag=AD08_RS0126860;product=sel1 repeat family protein;protein_id=WP_000642478.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 3708 4043 . + . ID=gene-AD08_RS0126865;Name=AD08_RS0126865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126865 NZ_JHDJ01000180.1 Protein Homology CDS 3708 4043 . + 0 ID=cds-WP_001326561.1;Parent=gene-AD08_RS0126865;Dbxref=Genbank:WP_001326561.1;Name=WP_001326561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518821.1;locus_tag=AD08_RS0126865;product=hypothetical protein;protein_id=WP_001326561.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 4606 5742 . - . ID=gene-AD08_RS03995;Name=AD08_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03995;old_locus_tag=AD08_3950 NZ_JHDJ01000180.1 Protein Homology CDS 4606 5742 . - 0 ID=cds-WP_000364939.1;Parent=gene-AD08_RS03995;Dbxref=Genbank:WP_000364939.1;Name=WP_000364939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312500.1;locus_tag=AD08_RS03995;product=HlyD family secretion protein;protein_id=WP_000364939.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 5745 6107 . - . ID=gene-AD08_RS03990;Name=AD08_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03990;old_locus_tag=AD08_3951 NZ_JHDJ01000180.1 Protein Homology CDS 5745 6107 . - 0 ID=cds-WP_000479624.1;Parent=gene-AD08_RS03990;Dbxref=Genbank:WP_000479624.1;Name=WP_000479624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418055.1;locus_tag=AD08_RS03990;product=DUF3302 domain-containing protein;protein_id=WP_000479624.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 6644 8557 . + . ID=gene-AD08_RS03985;Name=AD08_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03985;old_locus_tag=AD08_3952 NZ_JHDJ01000180.1 Protein Homology CDS 6644 8557 . + 0 ID=cds-WP_000093247.1;Parent=gene-AD08_RS03985;Dbxref=Genbank:WP_000093247.1;Name=WP_000093247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418056.1;locus_tag=AD08_RS03985;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093247.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 8787 9935 . + . ID=gene-AD08_RS03980;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=AD08_RS03980;old_locus_tag=AD08_3953 NZ_JHDJ01000180.1 Protein Homology CDS 8787 9935 . + 0 ID=cds-WP_000645420.1;Parent=gene-AD08_RS03980;Dbxref=Genbank:WP_000645420.1;Name=WP_000645420.1;gbkey=CDS;gene=mtlD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418057.1;locus_tag=AD08_RS03980;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645420.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 9935 10522 . + . ID=gene-AD08_RS03975;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=AD08_RS03975;old_locus_tag=AD08_3954 NZ_JHDJ01000180.1 Protein Homology CDS 9935 10522 . + 0 ID=cds-WP_000228269.1;Parent=gene-AD08_RS03975;Dbxref=Genbank:WP_000228269.1;Name=WP_000228269.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418058.1;locus_tag=AD08_RS03975;product=transcriptional repressor MtlR;protein_id=WP_000228269.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 10534 10743 . - . ID=gene-AD08_RS03970;Name=AD08_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03970;old_locus_tag=AD08_3955 NZ_JHDJ01000180.1 Protein Homology CDS 10534 10743 . - 0 ID=cds-WP_000517100.1;Parent=gene-AD08_RS03970;Dbxref=Genbank:WP_000517100.1;Name=WP_000517100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588470.1;locus_tag=AD08_RS03970;product=hypothetical protein;protein_id=WP_000517100.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 11028 11390 . + . ID=gene-AD08_RS03965;Name=AD08_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03965;old_locus_tag=AD08_3956 NZ_JHDJ01000180.1 Protein Homology CDS 11028 11390 . + 0 ID=cds-WP_000665680.1;Parent=gene-AD08_RS03965;Dbxref=Genbank:WP_000665680.1;Name=WP_000665680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312505.1;locus_tag=AD08_RS03965;product=YibL family ribosome-associated protein;protein_id=WP_000665680.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 11762 13417 . + . ID=gene-AD08_RS03960;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=AD08_RS03960;old_locus_tag=AD08_3957 NZ_JHDJ01000180.1 Protein Homology CDS 11762 13417 . + 0 ID=cds-WP_001297977.1;Parent=gene-AD08_RS03960;Dbxref=Genbank:WP_001297977.1;Name=WP_001297977.1;gbkey=CDS;gene=lldP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312508.1;locus_tag=AD08_RS03960;product=L-lactate permease;protein_id=WP_001297977.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 13417 14193 . + . ID=gene-AD08_RS03955;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=AD08_RS03955;old_locus_tag=AD08_3958 NZ_JHDJ01000180.1 Protein Homology CDS 13417 14193 . + 0 ID=cds-WP_000636500.1;Parent=gene-AD08_RS03955;Dbxref=Genbank:WP_000636500.1;Name=WP_000636500.1;gbkey=CDS;gene=lldR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418061.1;locus_tag=AD08_RS03955;product=transcriptional regulator LldR;protein_id=WP_000636500.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 14190 15380 . + . ID=gene-AD08_RS03950;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=AD08_RS03950;old_locus_tag=AD08_3959 NZ_JHDJ01000180.1 Protein Homology CDS 14190 15380 . + 0 ID=cds-WP_000586962.1;Parent=gene-AD08_RS03950;Dbxref=Genbank:WP_000586962.1;Name=WP_000586962.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418062.1;locus_tag=AD08_RS03950;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_000586962.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 15579 16052 . + . ID=gene-AD08_RS03945;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=AD08_RS03945;old_locus_tag=AD08_3960 NZ_JHDJ01000180.1 Protein Homology CDS 15579 16052 . + 0 ID=cds-WP_000932347.1;Parent=gene-AD08_RS03945;Dbxref=Genbank:WP_000932347.1;Name=WP_000932347.1;gbkey=CDS;gene=trmL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418063.1;locus_tag=AD08_RS03945;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932347.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 16105 16926 . - . ID=gene-AD08_RS03940;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=AD08_RS03940;old_locus_tag=AD08_3961 NZ_JHDJ01000180.1 Protein Homology CDS 16105 16926 . - 0 ID=cds-WP_001277561.1;Parent=gene-AD08_RS03940;Dbxref=Genbank:WP_001277561.1;Name=WP_001277561.1;gbkey=CDS;gene=cysE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=AD08_RS03940;product=serine O-acetyltransferase;protein_id=WP_001277561.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 17006 18025 . - . ID=gene-AD08_RS03935;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=AD08_RS03935;old_locus_tag=AD08_3962 NZ_JHDJ01000180.1 Protein Homology CDS 17006 18025 . - 0 ID=cds-WP_001076194.1;Parent=gene-AD08_RS03935;Dbxref=Genbank:WP_001076194.1;Name=WP_001076194.1;gbkey=CDS;gene=gpsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312513.1;locus_tag=AD08_RS03935;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076194.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 18025 18492 . - . ID=gene-AD08_RS03930;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=AD08_RS03930;old_locus_tag=AD08_3963 NZ_JHDJ01000180.1 Protein Homology CDS 18025 18492 . - 0 ID=cds-WP_000003377.1;Parent=gene-AD08_RS03930;Dbxref=Genbank:WP_000003377.1;Name=WP_000003377.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312514.1;locus_tag=AD08_RS03930;product=protein-export chaperone SecB;protein_id=WP_000003377.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 18555 18806 . - . ID=gene-AD08_RS03925;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=AD08_RS03925;old_locus_tag=AD08_3964 NZ_JHDJ01000180.1 Protein Homology CDS 18555 18806 . - 0 ID=cds-WP_000024392.1;Parent=gene-AD08_RS03925;Dbxref=Genbank:WP_000024392.1;Name=WP_000024392.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312515.1;locus_tag=AD08_RS03925;product=glutaredoxin 3;protein_id=WP_000024392.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 18948 19379 . - . ID=gene-AD08_RS03920;Name=AD08_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03920;old_locus_tag=AD08_3965 NZ_JHDJ01000180.1 Protein Homology CDS 18948 19379 . - 0 ID=cds-WP_001156181.1;Parent=gene-AD08_RS03920;Dbxref=Genbank:WP_001156181.1;Name=WP_001156181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312516.1;locus_tag=AD08_RS03920;product=rhodanese-like domain-containing protein;protein_id=WP_001156181.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 19624 21168 . + . ID=gene-AD08_RS03915;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=AD08_RS03915;old_locus_tag=AD08_3966 NZ_JHDJ01000180.1 Protein Homology CDS 19624 21168 . + 0 ID=cds-WP_001350558.1;Parent=gene-AD08_RS03915;Dbxref=Genbank:WP_001350558.1;Name=WP_001350558.1;gbkey=CDS;gene=gpmM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418069.1;locus_tag=AD08_RS03915;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_001350558.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 21178 22461 . + . ID=gene-AD08_RS03910;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=AD08_RS03910;old_locus_tag=AD08_3967 NZ_JHDJ01000180.1 Protein Homology CDS 21178 22461 . + 0 ID=cds-WP_001214147.1;Parent=gene-AD08_RS03910;Dbxref=Genbank:WP_001214147.1;Name=WP_001214147.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462605.1;locus_tag=AD08_RS03910;product=murein hydrolase activator EnvC;protein_id=WP_001214147.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 22465 23424 . + . ID=gene-AD08_RS03905;Name=AD08_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03905;old_locus_tag=AD08_3968 NZ_JHDJ01000180.1 Protein Homology CDS 22465 23424 . + 0 ID=cds-WP_000483848.1;Parent=gene-AD08_RS03905;Dbxref=Genbank:WP_000483848.1;Name=WP_000483848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418071.4;locus_tag=AD08_RS03905;product=divergent polysaccharide deacetylase family protein;protein_id=WP_000483848.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 23411 24445 . - . ID=gene-AD08_RS03900;Name=waaH;gbkey=Gene;gene=waaH;gene_biotype=protein_coding;locus_tag=AD08_RS03900;old_locus_tag=AD08_3969 NZ_JHDJ01000180.1 Protein Homology CDS 23411 24445 . - 0 ID=cds-WP_000982090.1;Parent=gene-AD08_RS03900;Dbxref=Genbank:WP_000982090.1;Name=WP_000982090.1;gbkey=CDS;gene=waaH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000982090.1;locus_tag=AD08_RS03900;product=UDP-glucuronate:LPS(HepIII) glycosyltransferase;protein_id=WP_000982090.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 24684 25709 . - . ID=gene-AD08_RS03895;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=AD08_RS03895;old_locus_tag=AD08_3970 NZ_JHDJ01000180.1 Protein Homology CDS 24684 25709 . - 0 ID=cds-WP_000646007.1;Parent=gene-AD08_RS03895;Dbxref=Genbank:WP_000646007.1;Name=WP_000646007.1;gbkey=CDS;gene=tdh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=AD08_RS03895;product=L-threonine 3-dehydrogenase;protein_id=WP_000646007.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 25719 26915 . - . ID=gene-AD08_RS03890;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=AD08_RS03890;old_locus_tag=AD08_3971 NZ_JHDJ01000180.1 Protein Homology CDS 25719 26915 . - 0 ID=cds-WP_001213834.1;Parent=gene-AD08_RS03890;Dbxref=Genbank:WP_001213834.1;Name=WP_001213834.1;gbkey=CDS;gene=kbl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=AD08_RS03890;product=glycine C-acetyltransferase;protein_id=WP_001213834.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 27129 28061 . + . ID=gene-AD08_RS03885;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=AD08_RS03885;old_locus_tag=AD08_3972 NZ_JHDJ01000180.1 Protein Homology CDS 27129 28061 . + 0 ID=cds-WP_000587748.1;Parent=gene-AD08_RS03885;Dbxref=Genbank:WP_000587748.1;Name=WP_000587748.1;gbkey=CDS;gene=rfaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=AD08_RS03885;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587748.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 28071 29117 . + . ID=gene-AD08_RS03880;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=AD08_RS03880;old_locus_tag=AD08_3973 NZ_JHDJ01000180.1 Protein Homology CDS 28071 29117 . + 0 ID=cds-WP_000699219.1;Parent=gene-AD08_RS03880;Dbxref=Genbank:WP_000699219.1;Name=WP_000699219.1;gbkey=CDS;gene=rfaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418077.1;locus_tag=AD08_RS03880;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699219.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 29121 30080 . + . ID=gene-AD08_RS03875;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=AD08_RS03875;old_locus_tag=AD08_3974 NZ_JHDJ01000180.1 Protein Homology CDS 29121 30080 . + 0 ID=cds-WP_001264563.1;Parent=gene-AD08_RS03875;Dbxref=Genbank:WP_001264563.1;Name=WP_001264563.1;gbkey=CDS;gene=rfaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418078.1;locus_tag=AD08_RS03875;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264563.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 30128 31381 . - . ID=gene-AD08_RS03870;Name=AD08_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03870;old_locus_tag=AD08_3975 NZ_JHDJ01000180.1 Protein Homology CDS 30128 31381 . - 0 ID=cds-WP_000453198.1;Parent=gene-AD08_RS03870;Dbxref=Genbank:WP_000453198.1;Name=WP_000453198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000453195.1;locus_tag=AD08_RS03870;product=O-antigen ligase family protein;protein_id=WP_000453198.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 31416 32189 . - . ID=gene-AD08_RS03865;Name=AD08_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03865;old_locus_tag=AD08_3976 NZ_JHDJ01000180.1 Protein Homology CDS 31416 32189 . - 0 ID=cds-WP_001052919.1;Parent=gene-AD08_RS03865;Dbxref=Genbank:WP_001052919.1;Name=WP_001052919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052917.1;locus_tag=AD08_RS03865;product=glycosyltransferase family 25 protein;protein_id=WP_001052919.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 32221 33249 . - . ID=gene-AD08_RS03860;Name=AD08_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03860;old_locus_tag=AD08_3977 NZ_JHDJ01000180.1 Protein Homology CDS 32221 33249 . - 0 ID=cds-WP_000364791.1;Parent=gene-AD08_RS03860;Dbxref=Genbank:WP_000364791.1;Name=WP_000364791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001626264.1;locus_tag=AD08_RS03860;product=UDP-galactose--(galactosyl) LPS alpha1%2C2-galactosyltransferase;protein_id=WP_000364791.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 33275 33967 . - . ID=gene-AD08_RS03855;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=AD08_RS03855;old_locus_tag=AD08_3978 NZ_JHDJ01000180.1 Protein Homology CDS 33275 33967 . - 0 ID=cds-WP_000633081.1;Parent=gene-AD08_RS03855;Dbxref=Genbank:WP_000633081.1;Name=WP_000633081.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633080.1;locus_tag=AD08_RS03855;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000633081.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 33977 34972 . - . ID=gene-AD08_RS03850;Name=AD08_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03850;old_locus_tag=AD08_3979 NZ_JHDJ01000180.1 Protein Homology CDS 33977 34972 . - 0 ID=cds-WP_001001719.1;Parent=gene-AD08_RS03850;Dbxref=Genbank:WP_001001719.1;Name=WP_001001719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001722.1;locus_tag=AD08_RS03850;product=LPS 1%2C2-glucosyltransferase;protein_id=WP_001001719.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 34989 36005 . - . ID=gene-AD08_RS03845;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=AD08_RS03845;old_locus_tag=AD08_3980 NZ_JHDJ01000180.1 Protein Homology CDS 34989 36005 . - 0 ID=cds-WP_001460132.1;Parent=gene-AD08_RS03845;Dbxref=Genbank:WP_001460132.1;Name=WP_001460132.1;gbkey=CDS;gene=waaO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540083.1;locus_tag=AD08_RS03845;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_001460132.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 36021 36818 . - . ID=gene-AD08_RS03840;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=AD08_RS03840;old_locus_tag=AD08_3981 NZ_JHDJ01000180.1 Protein Homology CDS 36021 36818 . - 0 ID=cds-WP_001295235.1;Parent=gene-AD08_RS03840;Dbxref=Genbank:WP_001295235.1;Name=WP_001295235.1;gbkey=CDS;gene=rfaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312532.2;locus_tag=AD08_RS03840;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_001295235.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 36811 37935 . - . ID=gene-AD08_RS03835;Name=AD08_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03835;old_locus_tag=AD08_3982 NZ_JHDJ01000180.1 Protein Homology CDS 36811 37935 . - 0 ID=cds-WP_000634239.1;Parent=gene-AD08_RS03835;Dbxref=Genbank:WP_000634239.1;Name=WP_000634239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312533.1;locus_tag=AD08_RS03835;product=glycosyltransferase family 4 protein;protein_id=WP_000634239.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 37932 38990 . - . ID=gene-AD08_RS03830;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=AD08_RS03830;old_locus_tag=AD08_3983 NZ_JHDJ01000180.1 Protein Homology CDS 37932 38990 . - 0 ID=cds-WP_000360398.1;Parent=gene-AD08_RS03830;Dbxref=Genbank:WP_000360398.1;Name=WP_000360398.1;gbkey=CDS;gene=rfaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709409.1;locus_tag=AD08_RS03830;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_000360398.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 39403 40680 . + . ID=gene-AD08_RS03825;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=AD08_RS03825;old_locus_tag=AD08_3984 NZ_JHDJ01000180.1 Protein Homology CDS 39403 40680 . + 0 ID=cds-WP_000891564.1;Parent=gene-AD08_RS03825;Dbxref=Genbank:WP_000891564.1;Name=WP_000891564.1;gbkey=CDS;gene=waaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312535.1;locus_tag=AD08_RS03825;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891564.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 40688 41167 . + . ID=gene-AD08_RS03820;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AD08_RS03820;old_locus_tag=AD08_3985 NZ_JHDJ01000180.1 Protein Homology CDS 40688 41167 . + 0 ID=cds-WP_001171873.1;Parent=gene-AD08_RS03820;Dbxref=Genbank:WP_001171873.1;Name=WP_001171873.1;gbkey=CDS;gene=coaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312536.1;locus_tag=AD08_RS03820;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171873.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 41206 42015 . - . ID=gene-AD08_RS03815;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=AD08_RS03815;old_locus_tag=AD08_3986 NZ_JHDJ01000180.1 Protein Homology CDS 41206 42015 . - 0 ID=cds-WP_001463783.1;Parent=gene-AD08_RS03815;Dbxref=Genbank:WP_001463783.1;Name=WP_001463783.1;gbkey=CDS;gene=mutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312537.1;locus_tag=AD08_RS03815;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001463783.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 42113 42280 . - . ID=gene-AD08_RS03810;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AD08_RS03810;old_locus_tag=AD08_3987 NZ_JHDJ01000180.1 Protein Homology CDS 42113 42280 . - 0 ID=cds-WP_001051798.1;Parent=gene-AD08_RS03810;Dbxref=Genbank:WP_001051798.1;Name=WP_001051798.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=AD08_RS03810;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 42301 42537 . - . ID=gene-AD08_RS03805;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AD08_RS03805;old_locus_tag=AD08_3988 NZ_JHDJ01000180.1 Protein Homology CDS 42301 42537 . - 0 ID=cds-WP_000091955.1;Parent=gene-AD08_RS03805;Dbxref=Genbank:WP_000091955.1;Name=WP_000091955.1;gbkey=CDS;gene=rpmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=AD08_RS03805;product=50S ribosomal protein L28;protein_id=WP_000091955.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 42754 43422 . - . ID=gene-AD08_RS03800;Name=AD08_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03800;old_locus_tag=AD08_3989 NZ_JHDJ01000180.1 Protein Homology CDS 42754 43422 . - 0 ID=cds-WP_001462870.1;Parent=gene-AD08_RS03800;Dbxref=Genbank:WP_001462870.1;Name=WP_001462870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418095.4;locus_tag=AD08_RS03800;product=JAB domain-containing protein;protein_id=WP_001462870.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 43594 44814 . + . ID=gene-AD08_RS03795;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=AD08_RS03795;old_locus_tag=AD08_3990 NZ_JHDJ01000180.1 Protein Homology CDS 43594 44814 . + 0 ID=cds-WP_000050139.1;Parent=gene-AD08_RS03795;Dbxref=Genbank:WP_000050139.1;Name=WP_000050139.1;gbkey=CDS;gene=coaBC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=AD08_RS03795;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050139.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 44792 45250 . + . ID=gene-AD08_RS03790;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=AD08_RS03790;old_locus_tag=AD08_3991 NZ_JHDJ01000180.1 Protein Homology CDS 44792 45250 . + 0 ID=cds-WP_000976070.1;Parent=gene-AD08_RS03790;Dbxref=Genbank:WP_000976070.1;Name=WP_000976070.1;gbkey=CDS;gene=dut;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=AD08_RS03790;product=dUTP diphosphatase;protein_id=WP_000976070.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 45357 45953 . + . ID=gene-AD08_RS03785;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=AD08_RS03785;old_locus_tag=AD08_3992 NZ_JHDJ01000180.1 Protein Homology CDS 45357 45953 . + 0 ID=cds-WP_000818601.1;Parent=gene-AD08_RS03785;Dbxref=Genbank:WP_000818601.1;Name=WP_000818601.1;gbkey=CDS;gene=slmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=AD08_RS03785;product=nucleoid occlusion factor SlmA;protein_id=WP_000818601.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 45990 46631 . - . ID=gene-AD08_RS03780;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AD08_RS03780;old_locus_tag=AD08_3993 NZ_JHDJ01000180.1 Protein Homology CDS 45990 46631 . - 0 ID=cds-WP_000806172.1;Parent=gene-AD08_RS03780;Dbxref=Genbank:WP_000806172.1;Name=WP_000806172.1;gbkey=CDS;gene=pyrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418099.1;locus_tag=AD08_RS03780;product=orotate phosphoribosyltransferase;protein_id=WP_000806172.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 46697 47413 . - . ID=gene-AD08_RS03775;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=AD08_RS03775;old_locus_tag=AD08_3994 NZ_JHDJ01000180.1 Protein Homology CDS 46697 47413 . - 0 ID=cds-WP_001247097.1;Parent=gene-AD08_RS03775;Dbxref=Genbank:WP_001247097.1;Name=WP_001247097.1;gbkey=CDS;gene=rph;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=AD08_RS03775;product=ribonuclease PH;protein_id=WP_001247097.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 47540 48403 . + . ID=gene-AD08_RS03770;Name=AD08_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03770;old_locus_tag=AD08_3995 NZ_JHDJ01000180.1 Protein Homology CDS 47540 48403 . + 0 ID=cds-WP_000621340.1;Parent=gene-AD08_RS03770;Dbxref=Genbank:WP_000621340.1;Name=WP_000621340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=AD08_RS03770;product=YicC family protein;protein_id=WP_000621340.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 48624 49448 . + . ID=gene-AD08_RS03765;Name=dinD;gbkey=Gene;gene=dinD;gene_biotype=protein_coding;locus_tag=AD08_RS03765;old_locus_tag=AD08_3996 NZ_JHDJ01000180.1 Protein Homology CDS 48624 49448 . + 0 ID=cds-WP_001460135.1;Parent=gene-AD08_RS03765;Dbxref=Genbank:WP_001460135.1;Name=WP_001460135.1;gbkey=CDS;gene=dinD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418102.2;locus_tag=AD08_RS03765;product=DNA damage-inducible protein D;protein_id=WP_001460135.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 49740 50357 . + . ID=gene-AD08_RS03760;Name=AD08_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03760;old_locus_tag=AD08_3997 NZ_JHDJ01000180.1 Protein Homology CDS 49740 50357 . + 0 ID=cds-WP_000924289.1;Parent=gene-AD08_RS03760;Dbxref=Genbank:WP_000924289.1;Name=WP_000924289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312548.2;locus_tag=AD08_RS03760;product=trimeric intracellular cation channel family protein;protein_id=WP_000924289.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 50354 52036 . - . ID=gene-AD08_RS03755;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=AD08_RS03755;old_locus_tag=AD08_3998 NZ_JHDJ01000180.1 Protein Homology CDS 50354 52036 . - 0 ID=cds-WP_032176713.1;Parent=gene-AD08_RS03755;Dbxref=Genbank:WP_032176713.1;Name=WP_032176713.1;gbkey=CDS;gene=ligB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418104.2;locus_tag=AD08_RS03755;product=NAD-dependent DNA ligase LigB;protein_id=WP_032176713.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 52294 52917 . + . ID=gene-AD08_RS03750;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=AD08_RS03750;old_locus_tag=AD08_3999 NZ_JHDJ01000180.1 Protein Homology CDS 52294 52917 . + 0 ID=cds-WP_001295237.1;Parent=gene-AD08_RS03750;Dbxref=Genbank:WP_001295237.1;Name=WP_001295237.1;gbkey=CDS;gene=gmk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418105.1;locus_tag=AD08_RS03750;product=guanylate kinase;protein_id=WP_001295237.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 52972 53247 . + . ID=gene-AD08_RS03745;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=AD08_RS03745;old_locus_tag=AD08_4000 NZ_JHDJ01000180.1 Protein Homology CDS 52972 53247 . + 0 ID=cds-WP_000135058.1;Parent=gene-AD08_RS03745;Dbxref=Genbank:WP_000135058.1;Name=WP_000135058.1;gbkey=CDS;gene=rpoZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=AD08_RS03745;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 53266 55374 . + . ID=gene-AD08_RS03740;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=AD08_RS03740;old_locus_tag=AD08_4001 NZ_JHDJ01000180.1 Protein Homology CDS 53266 55374 . + 0 ID=cds-WP_000280488.1;Parent=gene-AD08_RS03740;Dbxref=Genbank:WP_000280488.1;Name=WP_000280488.1;gbkey=CDS;gene=spoT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312552.1;locus_tag=AD08_RS03740;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280488.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 55381 56070 . + . ID=gene-AD08_RS03735;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=AD08_RS03735;old_locus_tag=AD08_4002 NZ_JHDJ01000180.1 Protein Homology CDS 55381 56070 . + 0 ID=cds-WP_001070177.1;Parent=gene-AD08_RS03735;Dbxref=Genbank:WP_001070177.1;Name=WP_001070177.1;gbkey=CDS;gene=trmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418108.1;locus_tag=AD08_RS03735;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001070177.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 56076 58157 . + . ID=gene-AD08_RS03730;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=AD08_RS03730;old_locus_tag=AD08_4003 NZ_JHDJ01000180.1 Protein Homology CDS 56076 58157 . + 0 ID=cds-WP_000678419.1;Parent=gene-AD08_RS03730;Dbxref=Genbank:WP_000678419.1;Name=WP_000678419.1;gbkey=CDS;gene=recG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418109.1;locus_tag=AD08_RS03730;product=ATP-dependent DNA helicase RecG;protein_id=WP_000678419.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 58142 58801 . - . ID=gene-AD08_RS30760;Name=AD08_RS30760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30760;old_locus_tag=AD08_4004 NZ_JHDJ01000180.1 Protein Homology CDS 58142 58801 . - 0 ID=cds-WP_097413227.1;Parent=gene-AD08_RS30760;Dbxref=Genbank:WP_097413227.1;Name=WP_097413227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001388677.1;locus_tag=AD08_RS30760;product=hypothetical protein;protein_id=WP_097413227.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 58865 59008 . - . ID=gene-AD08_RS31810;Name=AD08_RS31810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31810;old_locus_tag=AD08_4005 NZ_JHDJ01000180.1 GeneMarkS-2+ CDS 58865 59008 . - 0 ID=cds-WP_001388678.1;Parent=gene-AD08_RS31810;Dbxref=Genbank:WP_001388678.1;Name=WP_001388678.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS31810;product=hypothetical protein;protein_id=WP_001388678.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 59011 60216 . - . ID=gene-AD08_RS03725;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=AD08_RS03725;old_locus_tag=AD08_4006 NZ_JHDJ01000180.1 Protein Homology CDS 59011 60216 . - 0 ID=cds-WP_000468833.1;Parent=gene-AD08_RS03725;Dbxref=Genbank:WP_000468833.1;Name=WP_000468833.1;gbkey=CDS;gene=gltS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418110.1;locus_tag=AD08_RS03725;product=sodium/glutamate symporter;protein_id=WP_000468833.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 60496 61887 . + . ID=gene-AD08_RS03720;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=AD08_RS03720;old_locus_tag=AD08_4007 NZ_JHDJ01000180.1 Protein Homology CDS 60496 61887 . + 0 ID=cds-WP_001295238.1;Parent=gene-AD08_RS03720;Dbxref=Genbank:WP_001295238.1;Name=WP_001295238.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312557.1;locus_tag=AD08_RS03720;product=xanthine/proton symporter XanP;protein_id=WP_001295238.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 62008 63717 . + . ID=gene-AD08_RS03715;Name=AD08_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03715;old_locus_tag=AD08_4008 NZ_JHDJ01000180.1 Protein Homology CDS 62008 63717 . + 0 ID=cds-WP_001300954.1;Parent=gene-AD08_RS03715;Dbxref=Genbank:WP_001300954.1;Name=WP_001300954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418112.1;locus_tag=AD08_RS03715;product=AsmA family protein;protein_id=WP_001300954.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 63770 66088 . - . ID=gene-AD08_RS03710;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=AD08_RS03710;old_locus_tag=AD08_4009 NZ_JHDJ01000180.1 Protein Homology CDS 63770 66088 . - 0 ID=cds-WP_000702898.1;Parent=gene-AD08_RS03710;Dbxref=Genbank:WP_000702898.1;Name=WP_000702898.1;gbkey=CDS;gene=yicI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418113.1;locus_tag=AD08_RS03710;product=alpha-xylosidase;protein_id=WP_000702898.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 66098 67480 . - . ID=gene-AD08_RS03705;Name=AD08_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03705;old_locus_tag=AD08_4010 NZ_JHDJ01000180.1 Protein Homology CDS 66098 67480 . - 0 ID=cds-WP_000834439.1;Parent=gene-AD08_RS03705;Dbxref=Genbank:WP_000834439.1;Name=WP_000834439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418114.4;locus_tag=AD08_RS03705;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834439.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 67773 67867 . + . ID=gene-AD08_RS03700;Name=AD08_RS03700;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS03700;old_locus_tag=AD08_4011 NZ_JHDJ01000180.1 tRNAscan-SE tRNA 67773 67867 . + . ID=rna-AD08_RS03700;Parent=gene-AD08_RS03700;anticodon=(pos:67807..67809);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS03700;product=tRNA-Sec NZ_JHDJ01000180.1 tRNAscan-SE exon 67773 67867 . + . ID=exon-AD08_RS03700-1;Parent=rna-AD08_RS03700;anticodon=(pos:67807..67809);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS03700;product=tRNA-Sec NZ_JHDJ01000180.1 RefSeq gene 67976 68122 . + . ID=gene-AD08_RS03695;Name=AD08_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03695;old_locus_tag=AD08_4012 NZ_JHDJ01000180.1 Protein Homology CDS 67976 68122 . + 0 ID=cds-WP_001315909.1;Parent=gene-AD08_RS03695;Dbxref=Genbank:WP_001315909.1;Name=WP_001315909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001626279.1;locus_tag=AD08_RS03695;product=hypothetical protein;protein_id=WP_001315909.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 68504 69688 . + . ID=gene-AD08_RS03690;Name=AD08_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03690;old_locus_tag=AD08_4013 NZ_JHDJ01000180.1 Protein Homology CDS 68504 69688 . + 0 ID=cds-WP_001172876.1;Parent=gene-AD08_RS03690;Dbxref=Genbank:WP_001172876.1;Name=WP_001172876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418115.1;locus_tag=AD08_RS03690;product=sugar efflux transporter;protein_id=WP_001172876.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 69799 70722 . + . ID=gene-AD08_RS03685;Name=AD08_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03685;old_locus_tag=AD08_4014 NZ_JHDJ01000180.1 Protein Homology CDS 69799 70722 . + 0 ID=cds-WP_000535961.1;Parent=gene-AD08_RS03685;Dbxref=Genbank:WP_000535961.1;Name=WP_000535961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418116.1;locus_tag=AD08_RS03685;product=DMT family transporter;protein_id=WP_000535961.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 70726 71544 . - . ID=gene-AD08_RS03680;Name=nlpA;gbkey=Gene;gene=nlpA;gene_biotype=protein_coding;locus_tag=AD08_RS03680;old_locus_tag=AD08_4015 NZ_JHDJ01000180.1 Protein Homology CDS 70726 71544 . - 0 ID=cds-WP_032219351.1;Parent=gene-AD08_RS03680;Dbxref=Genbank:WP_032219351.1;Name=WP_032219351.1;gbkey=CDS;gene=nlpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418117.1;locus_tag=AD08_RS03680;product=lipoprotein NlpA;protein_id=WP_032219351.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 71766 72059 . + . ID=gene-AD08_RS03670;Name=AD08_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03670;old_locus_tag=AD08_4017 NZ_JHDJ01000180.1 Protein Homology CDS 71766 72059 . + 0 ID=cds-WP_000805509.1;Parent=gene-AD08_RS03670;Dbxref=Genbank:WP_000805509.1;Name=WP_000805509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588471.1;locus_tag=AD08_RS03670;product=hypothetical protein;protein_id=WP_000805509.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 72100 73290 . - . ID=gene-AD08_RS03665;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=AD08_RS03665;old_locus_tag=AD08_4018 NZ_JHDJ01000180.1 Protein Homology CDS 72100 73290 . - 0 ID=cds-WP_001288549.1;Parent=gene-AD08_RS03665;Dbxref=Genbank:WP_001288549.1;Name=WP_001288549.1;gbkey=CDS;gene=nepI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418118.2;locus_tag=AD08_RS03665;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001288549.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq pseudogene 73501 73948 . - . ID=gene-AD08_RS03660;Name=AD08_RS03660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS03660;old_locus_tag=AD08_4019;pseudo=true NZ_JHDJ01000180.1 Protein Homology CDS 73501 73948 . - 0 ID=cds-AD08_RS03660;Parent=gene-AD08_RS03660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418119.2;locus_tag=AD08_RS03660;product=DUF1198 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 74001 75335 . - . ID=gene-AD08_RS03655;Name=AD08_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03655;old_locus_tag=AD08_4020 NZ_JHDJ01000180.1 Protein Homology CDS 74001 75335 . - 0 ID=cds-WP_001403836.1;Parent=gene-AD08_RS03655;Dbxref=Genbank:WP_001403836.1;Name=WP_001403836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418120.2;locus_tag=AD08_RS03655;product=adenine permease AdeQ;protein_id=WP_001403836.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 75510 77276 . + . ID=gene-AD08_RS03650;Name=adeD;gbkey=Gene;gene=adeD;gene_biotype=protein_coding;locus_tag=AD08_RS03650;old_locus_tag=AD08_4021 NZ_JHDJ01000180.1 Protein Homology CDS 75510 77276 . + 0 ID=cds-WP_001065718.1;Parent=gene-AD08_RS03650;Dbxref=Genbank:WP_001065718.1;Name=WP_001065718.1;gbkey=CDS;gene=adeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418121.1;locus_tag=AD08_RS03650;product=adenine deaminase;protein_id=WP_001065718.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 77322 78713 . - . ID=gene-AD08_RS03645;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=AD08_RS03645;old_locus_tag=AD08_4022 NZ_JHDJ01000180.1 Protein Homology CDS 77322 78713 . - 0 ID=cds-WP_000879194.1;Parent=gene-AD08_RS03645;Dbxref=Genbank:WP_000879194.1;Name=WP_000879194.1;gbkey=CDS;gene=uhpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312630.1;locus_tag=AD08_RS03645;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879194.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 78851 80170 . - . ID=gene-AD08_RS03640;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=AD08_RS03640;old_locus_tag=AD08_4023 NZ_JHDJ01000180.1 Protein Homology CDS 78851 80170 . - 0 ID=cds-WP_000936566.1;Parent=gene-AD08_RS03640;Dbxref=Genbank:WP_000936566.1;Name=WP_000936566.1;gbkey=CDS;gene=uhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418123.2;locus_tag=AD08_RS03640;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=WP_000936566.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 80180 81682 . - . ID=gene-AD08_RS03635;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=AD08_RS03635;old_locus_tag=AD08_4024 NZ_JHDJ01000180.1 Protein Homology CDS 80180 81682 . - 0 ID=cds-WP_001295243.1;Parent=gene-AD08_RS03635;Dbxref=Genbank:WP_001295243.1;Name=WP_001295243.1;gbkey=CDS;gene=uhpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418124.4;locus_tag=AD08_RS03635;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_001295243.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 81682 82272 . - . ID=gene-AD08_RS03630;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=AD08_RS03630;old_locus_tag=AD08_4025 NZ_JHDJ01000180.1 Protein Homology CDS 81682 82272 . - 0 ID=cds-WP_000633668.1;Parent=gene-AD08_RS03630;Dbxref=Genbank:WP_000633668.1;Name=WP_000633668.1;gbkey=CDS;gene=uhpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312633.1;locus_tag=AD08_RS03630;product=transcriptional regulator UhpA;protein_id=WP_000633668.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 82348 82638 . - . ID=gene-AD08_RS03625;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AD08_RS03625;old_locus_tag=AD08_4026 NZ_JHDJ01000180.1 Protein Homology CDS 82348 82638 . - 0 ID=cds-WP_001181706.1;Parent=gene-AD08_RS03625;Dbxref=Genbank:WP_001181706.1;Name=WP_001181706.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312638.1;locus_tag=AD08_RS03625;product=acetolactate synthase small subunit;protein_id=WP_001181706.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 82642 84330 . - . ID=gene-AD08_RS03620;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=AD08_RS03620;old_locus_tag=AD08_4027 NZ_JHDJ01000180.1 Protein Homology CDS 82642 84330 . - 0 ID=cds-WP_000168475.1;Parent=gene-AD08_RS03620;Dbxref=Genbank:WP_000168475.1;Name=WP_000168475.1;gbkey=CDS;gene=ilvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418127.1;locus_tag=AD08_RS03620;product=acetolactate synthase large subunit;protein_id=WP_000168475.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 84436 84534 . - . ID=gene-AD08_RS0126875;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=AD08_RS0126875 NZ_JHDJ01000180.1 Protein Homology CDS 84436 84534 . - 0 ID=cds-WP_001300753.1;Parent=gene-AD08_RS0126875;Dbxref=Genbank:WP_001300753.1;Name=WP_001300753.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418128.1;locus_tag=AD08_RS0126875;product=ilvB operon leader peptide IvbL;protein_id=WP_001300753.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 85099 85188 . + . ID=gene-AD08_RS0126890;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=AD08_RS0126890 NZ_JHDJ01000180.1 Protein Homology CDS 85099 85188 . + 0 ID=cds-WP_001054909.1;Parent=gene-AD08_RS0126890;Dbxref=Genbank:WP_001054909.1;Name=WP_001054909.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165331.1;locus_tag=AD08_RS0126890;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_001054909.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 85468 86652 . + . ID=gene-AD08_RS03615;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=AD08_RS03615;old_locus_tag=AD08_4029 NZ_JHDJ01000180.1 Protein Homology CDS 85468 86652 . + 0 ID=cds-WP_000828746.1;Parent=gene-AD08_RS03615;Dbxref=Genbank:WP_000828746.1;Name=WP_000828746.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418129.2;locus_tag=AD08_RS03615;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828746.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 86660 87157 . - . ID=gene-AD08_RS03610;Name=AD08_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03610;old_locus_tag=AD08_4030 NZ_JHDJ01000180.1 Protein Homology CDS 86660 87157 . - 0 ID=cds-WP_032219353.1;Parent=gene-AD08_RS03610;Dbxref=Genbank:WP_032219353.1;Name=WP_032219353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418130.1;locus_tag=AD08_RS03610;product=radical SAM protein;protein_id=WP_032219353.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 87154 87516 . - . ID=gene-AD08_RS03605;Name=AD08_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03605;old_locus_tag=AD08_4031 NZ_JHDJ01000180.1 Protein Homology CDS 87154 87516 . - 0 ID=cds-WP_001113432.1;Parent=gene-AD08_RS03605;Dbxref=Genbank:WP_001113432.1;Name=WP_001113432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312643.1;locus_tag=AD08_RS03605;product=DUF202 domain-containing protein;protein_id=WP_001113432.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 87506 87853 . - . ID=gene-AD08_RS03600;Name=AD08_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03600;old_locus_tag=AD08_4032 NZ_JHDJ01000180.1 Protein Homology CDS 87506 87853 . - 0 ID=cds-WP_000703959.1;Parent=gene-AD08_RS03600;Dbxref=Genbank:WP_000703959.1;Name=WP_000703959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312644.1;locus_tag=AD08_RS03600;product=YidH family protein;protein_id=WP_000703959.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 87961 88410 . + . ID=gene-AD08_RS03595;Name=AD08_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03595;old_locus_tag=AD08_4033 NZ_JHDJ01000180.1 Protein Homology CDS 87961 88410 . + 0 ID=cds-WP_000511289.1;Parent=gene-AD08_RS03595;Dbxref=Genbank:WP_000511289.1;Name=WP_000511289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418133.1;locus_tag=AD08_RS03595;product=hypothetical protein;protein_id=WP_000511289.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 88457 89950 . - . ID=gene-AD08_RS03590;Name=AD08_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03590;old_locus_tag=AD08_4034 NZ_JHDJ01000180.1 Protein Homology CDS 88457 89950 . - 0 ID=cds-WP_000828527.1;Parent=gene-AD08_RS03590;Dbxref=Genbank:WP_000828527.1;Name=WP_000828527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418134.1;locus_tag=AD08_RS03590;product=sulfatase-like hydrolase/transferase;protein_id=WP_000828527.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 89947 91662 . - . ID=gene-AD08_RS03585;Name=AD08_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03585;old_locus_tag=AD08_4035 NZ_JHDJ01000180.1 Protein Homology CDS 89947 91662 . - 0 ID=cds-WP_001087145.1;Parent=gene-AD08_RS03585;Dbxref=Genbank:WP_001087145.1;Name=WP_001087145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418135.1;locus_tag=AD08_RS03585;product=solute:sodium symporter family transporter;protein_id=WP_001087145.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 91829 92722 . + . ID=gene-AD08_RS03580;Name=AD08_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03580;old_locus_tag=AD08_4036 NZ_JHDJ01000180.1 Protein Homology CDS 91829 92722 . + 0 ID=cds-WP_001013540.1;Parent=gene-AD08_RS03580;Dbxref=Genbank:WP_001013540.1;Name=WP_001013540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418136.2;locus_tag=AD08_RS03580;product=AraC family transcriptional regulator;protein_id=WP_001013540.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq pseudogene 92719 93533 . - . ID=gene-AD08_RS03575;Name=AD08_RS03575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS03575;old_locus_tag=AD08_4038;pseudo=true NZ_JHDJ01000180.1 Protein Homology CDS 92719 93533 . - 0 ID=cds-AD08_RS03575;Parent=gene-AD08_RS03575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312649.2;locus_tag=AD08_RS03575;product=inactive 6-phospho-alpha-glucosidase;pseudo=true;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 93533 95149 . - . ID=gene-AD08_RS03570;Name=AD08_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03570;old_locus_tag=AD08_4039 NZ_JHDJ01000180.1 Protein Homology CDS 93533 95149 . - 0 ID=cds-WP_000952141.1;Parent=gene-AD08_RS03570;Dbxref=Genbank:WP_000952141.1;Name=WP_000952141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312650.2;locus_tag=AD08_RS03570;product=PTS sugar transporter subunit IIB;protein_id=WP_000952141.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 95445 96161 . + . ID=gene-AD08_RS03565;Name=AD08_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03565;old_locus_tag=AD08_4040 NZ_JHDJ01000180.1 Protein Homology CDS 95445 96161 . + 0 ID=cds-WP_001300779.1;Parent=gene-AD08_RS03565;Dbxref=Genbank:WP_001300779.1;Name=WP_001300779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418139.1;locus_tag=AD08_RS03565;product=GntR family transcriptional regulator;protein_id=WP_001300779.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 96158 97819 . - . ID=gene-AD08_RS03560;Name=AD08_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03560;old_locus_tag=AD08_4041 NZ_JHDJ01000180.1 Protein Homology CDS 96158 97819 . - 0 ID=cds-WP_001279752.1;Parent=gene-AD08_RS03560;Dbxref=Genbank:WP_001279752.1;Name=WP_001279752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312652.2;locus_tag=AD08_RS03560;product=putative transporter;protein_id=WP_001279752.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 98015 98443 . - . ID=gene-AD08_RS03555;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=AD08_RS03555;old_locus_tag=AD08_4042 NZ_JHDJ01000180.1 Protein Homology CDS 98015 98443 . - 0 ID=cds-WP_001243431.1;Parent=gene-AD08_RS03555;Dbxref=Genbank:WP_001243431.1;Name=WP_001243431.1;gbkey=CDS;gene=ibpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709512.2;locus_tag=AD08_RS03555;product=heat shock chaperone IbpB;protein_id=WP_001243431.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 98555 98968 . - . ID=gene-AD08_RS03550;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=AD08_RS03550;old_locus_tag=AD08_4043 NZ_JHDJ01000180.1 Protein Homology CDS 98555 98968 . - 0 ID=cds-WP_001243437.1;Parent=gene-AD08_RS03550;Dbxref=Genbank:WP_001243437.1;Name=WP_001243437.1;gbkey=CDS;gene=ibpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=AD08_RS03550;product=heat shock chaperone IbpA;protein_id=WP_001243437.1;transl_table=11 NZ_JHDJ01000180.1 cmsearch sequence_feature 98962 99034 . - . ID=id-NZ_JHDJ01000180.1:98962..99034;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_JHDJ01000180.1 RefSeq gene 99274 99606 . + . ID=gene-AD08_RS03545;Name=AD08_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03545;old_locus_tag=AD08_4044 NZ_JHDJ01000180.1 Protein Homology CDS 99274 99606 . + 0 ID=cds-WP_000620888.1;Parent=gene-AD08_RS03545;Dbxref=Genbank:WP_000620888.1;Name=WP_000620888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418143.2;locus_tag=AD08_RS03545;product=YceK/YidQ family lipoprotein;protein_id=WP_000620888.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 99608 100858 . - . ID=gene-AD08_RS03540;Name=AD08_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03540;old_locus_tag=AD08_4045 NZ_JHDJ01000180.1 Protein Homology CDS 99608 100858 . - 0 ID=cds-WP_074478275.1;Parent=gene-AD08_RS03540;Dbxref=Genbank:WP_074478275.1;Name=WP_074478275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709509.1;locus_tag=AD08_RS03540;product=YidR family protein;protein_id=WP_074478275.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 100923 101987 . + . ID=gene-AD08_RS03535;Name=cbrA;gbkey=Gene;gene=cbrA;gene_biotype=protein_coding;locus_tag=AD08_RS03535;old_locus_tag=AD08_4046 NZ_JHDJ01000180.1 Protein Homology CDS 100923 101987 . + 0 ID=cds-WP_001340434.1;Parent=gene-AD08_RS03535;Dbxref=Genbank:WP_001340434.1;Name=WP_001340434.1;gbkey=CDS;gene=cbrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418145.2;locus_tag=AD08_RS03535;product=colicin M resistance protein;protein_id=WP_001340434.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 101984 103321 . - . ID=gene-AD08_RS03530;Name=AD08_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03530;old_locus_tag=AD08_4047 NZ_JHDJ01000180.1 Protein Homology CDS 101984 103321 . - 0 ID=cds-WP_000253455.1;Parent=gene-AD08_RS03530;Dbxref=Genbank:WP_000253455.1;Name=WP_000253455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709507.1;locus_tag=AD08_RS03530;product=MFS transporter;protein_id=WP_000253455.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 103396 104544 . - . ID=gene-AD08_RS03525;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=AD08_RS03525;old_locus_tag=AD08_4048 NZ_JHDJ01000180.1 Protein Homology CDS 103396 104544 . - 0 ID=cds-WP_000705001.1;Parent=gene-AD08_RS03525;Dbxref=Genbank:WP_000705001.1;Name=WP_000705001.1;gbkey=CDS;gene=dgoD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=AD08_RS03525;product=galactonate dehydratase;protein_id=WP_000705001.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 104541 105158 . - . ID=gene-AD08_RS03520;Name=AD08_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03520;old_locus_tag=AD08_4049 NZ_JHDJ01000180.1 Protein Homology CDS 104541 105158 . - 0 ID=cds-WP_032219355.1;Parent=gene-AD08_RS03520;Dbxref=Genbank:WP_032219355.1;Name=WP_032219355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026238.1;locus_tag=AD08_RS03520;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_032219355.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 105142 106020 . - . ID=gene-AD08_RS03515;Name=AD08_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03515;old_locus_tag=AD08_4050 NZ_JHDJ01000180.1 Protein Homology CDS 105142 106020 . - 0 ID=cds-WP_000127091.1;Parent=gene-AD08_RS03515;Dbxref=Genbank:WP_000127091.1;Name=WP_000127091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418148.1;locus_tag=AD08_RS03515;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_000127091.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 106017 106706 . - . ID=gene-AD08_RS03510;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=AD08_RS03510;old_locus_tag=AD08_4051 NZ_JHDJ01000180.1 Protein Homology CDS 106017 106706 . - 0 ID=cds-WP_000174305.1;Parent=gene-AD08_RS03510;Dbxref=Genbank:WP_000174305.1;Name=WP_000174305.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709505.1;locus_tag=AD08_RS03510;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_000174305.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 106984 107640 . + . ID=gene-AD08_RS03505;Name=AD08_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03505;old_locus_tag=AD08_4052 NZ_JHDJ01000180.1 Protein Homology CDS 106984 107640 . + 0 ID=cds-WP_000772934.1;Parent=gene-AD08_RS03505;Dbxref=Genbank:WP_000772934.1;Name=WP_000772934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709504.1;locus_tag=AD08_RS03505;product=hypothetical protein;protein_id=WP_000772934.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 107686 108498 . - . ID=gene-AD08_RS03500;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=AD08_RS03500;old_locus_tag=AD08_4053 NZ_JHDJ01000180.1 Protein Homology CDS 107686 108498 . - 0 ID=cds-WP_032219357.1;Parent=gene-AD08_RS03500;Dbxref=Genbank:WP_032219357.1;Name=WP_032219357.1;gbkey=CDS;gene=yidA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=AD08_RS03500;product=sugar-phosphatase;protein_id=WP_032219357.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 108613 109020 . - . ID=gene-AD08_RS03495;Name=AD08_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03495;old_locus_tag=AD08_4054 NZ_JHDJ01000180.1 Protein Homology CDS 108613 109020 . - 0 ID=cds-WP_001311237.1;Parent=gene-AD08_RS03495;Dbxref=Genbank:WP_001311237.1;Name=WP_001311237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311237.1;locus_tag=AD08_RS03495;product=YidB family protein;protein_id=WP_001311237.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 109251 111665 . - . ID=gene-AD08_RS03490;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AD08_RS03490;old_locus_tag=AD08_4055 NZ_JHDJ01000180.1 Protein Homology CDS 109251 111665 . - 0 ID=cds-WP_001406257.1;Parent=gene-AD08_RS03490;Dbxref=Genbank:WP_001406257.1;Name=WP_001406257.1;gbkey=CDS;gene=gyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312661.1;locus_tag=AD08_RS03490;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_001406257.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 111694 112767 . - . ID=gene-AD08_RS03485;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=AD08_RS03485;old_locus_tag=AD08_4056 NZ_JHDJ01000180.1 Protein Homology CDS 111694 112767 . - 0 ID=cds-WP_000060112.1;Parent=gene-AD08_RS03485;Dbxref=Genbank:WP_000060112.1;Name=WP_000060112.1;gbkey=CDS;gene=recF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=AD08_RS03485;product=DNA replication/repair protein RecF;protein_id=WP_000060112.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 112767 113867 . - . ID=gene-AD08_RS03480;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=AD08_RS03480;old_locus_tag=AD08_4057 NZ_JHDJ01000180.1 Protein Homology CDS 112767 113867 . - 0 ID=cds-WP_000673464.1;Parent=gene-AD08_RS03480;Dbxref=Genbank:WP_000673464.1;Name=WP_000673464.1;gbkey=CDS;gene=dnaN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=AD08_RS03480;product=DNA polymerase III subunit beta;protein_id=WP_000673464.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 113872 115275 . - . ID=gene-AD08_RS03475;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AD08_RS03475;old_locus_tag=AD08_4058 NZ_JHDJ01000180.1 Protein Homology CDS 113872 115275 . - 0 ID=cds-WP_000059111.1;Parent=gene-AD08_RS03475;Dbxref=Genbank:WP_000059111.1;Name=WP_000059111.1;gbkey=CDS;gene=dnaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418157.1;locus_tag=AD08_RS03475;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059111.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 115572 115652 . + . ID=gene-AD08_RS31815;Name=AD08_RS31815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31815 NZ_JHDJ01000180.1 Protein Homology CDS 115572 115652 . + 0 ID=cds-WP_120795392.1;Parent=gene-AD08_RS31815;Dbxref=Genbank:WP_120795392.1;Name=WP_120795392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518826.1;locus_tag=AD08_RS31815;product=protein YsdD;protein_id=WP_120795392.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 115882 116022 . + . ID=gene-AD08_RS03470;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AD08_RS03470;old_locus_tag=AD08_4059 NZ_JHDJ01000180.1 Protein Homology CDS 115882 116022 . + 0 ID=cds-WP_000831330.1;Parent=gene-AD08_RS03470;Dbxref=Genbank:WP_000831330.1;Name=WP_000831330.1;gbkey=CDS;gene=rpmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=AD08_RS03470;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 116039 116398 . + . ID=gene-AD08_RS0126900;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AD08_RS0126900 NZ_JHDJ01000180.1 Protein Homology CDS 116039 116398 . + 0 ID=cds-WP_000239730.1;Parent=gene-AD08_RS0126900;Dbxref=Genbank:WP_000239730.1;Name=WP_000239730.1;gbkey=CDS;gene=rnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=AD08_RS0126900;product=ribonuclease P protein component;protein_id=WP_000239730.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 116362 116619 . + . ID=gene-AD08_RS0126905;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=AD08_RS0126905 NZ_JHDJ01000180.1 Protein Homology CDS 116362 116619 . + 0 ID=cds-WP_001307474.1;Parent=gene-AD08_RS0126905;Dbxref=Genbank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=AD08_RS0126905;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 116622 118268 . + . ID=gene-AD08_RS03465;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=AD08_RS03465;old_locus_tag=AD08_4061 NZ_JHDJ01000180.1 Protein Homology CDS 116622 118268 . + 0 ID=cds-WP_000378250.1;Parent=gene-AD08_RS03465;Dbxref=Genbank:WP_000378250.1;Name=WP_000378250.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418161.1;locus_tag=AD08_RS03465;product=membrane protein insertase YidC;protein_id=WP_000378250.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 118374 119738 . + . ID=gene-AD08_RS03460;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=AD08_RS03460;old_locus_tag=AD08_4062 NZ_JHDJ01000180.1 Protein Homology CDS 118374 119738 . + 0 ID=cds-WP_001282346.1;Parent=gene-AD08_RS03460;Dbxref=Genbank:WP_001282346.1;Name=WP_001282346.1;gbkey=CDS;gene=mnmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418162.1;locus_tag=AD08_RS03460;product=tRNA uridine(34) 5-carboxymethylaminomethyl synthesis GTPase MnmE;protein_id=WP_001282346.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 119981 120055 . + . ID=gene-AD08_RS0126910;Name=tnaC;gbkey=Gene;gene=tnaC;gene_biotype=protein_coding;locus_tag=AD08_RS0126910 NZ_JHDJ01000180.1 Protein Homology CDS 119981 120055 . + 0 ID=cds-WP_001364348.1;Parent=gene-AD08_RS0126910;Dbxref=Genbank:WP_001364348.1;Name=WP_001364348.1;gbkey=CDS;gene=tnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312671.1;locus_tag=AD08_RS0126910;product=tryptophanase leader peptide;protein_id=WP_001364348.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 120276 121691 . + . ID=gene-AD08_RS03455;Name=tnaA;gbkey=Gene;gene=tnaA;gene_biotype=protein_coding;locus_tag=AD08_RS03455;old_locus_tag=AD08_4063 NZ_JHDJ01000180.1 Protein Homology CDS 120276 121691 . + 0 ID=cds-WP_001458408.1;Parent=gene-AD08_RS03455;Dbxref=Genbank:WP_001458408.1;Name=WP_001458408.1;gbkey=CDS;gene=tnaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709490.2;locus_tag=AD08_RS03455;product=tryptophanase;protein_id=WP_001458408.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 121782 123029 . + . ID=gene-AD08_RS03450;Name=tnaB;gbkey=Gene;gene=tnaB;gene_biotype=protein_coding;locus_tag=AD08_RS03450;old_locus_tag=AD08_4064 NZ_JHDJ01000180.1 Protein Homology CDS 121782 123029 . + 0 ID=cds-WP_000131925.1;Parent=gene-AD08_RS03450;Dbxref=Genbank:WP_000131925.1;Name=WP_000131925.1;gbkey=CDS;gene=tnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418165.1;locus_tag=AD08_RS03450;product=low affinity tryptophan permease TnaB;protein_id=WP_000131925.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 123161 124336 . + . ID=gene-AD08_RS03445;Name=mdtL;gbkey=Gene;gene=mdtL;gene_biotype=protein_coding;locus_tag=AD08_RS03445;old_locus_tag=AD08_4065 NZ_JHDJ01000180.1 Protein Homology CDS 123161 124336 . + 0 ID=cds-WP_000085982.1;Parent=gene-AD08_RS03445;Dbxref=Genbank:WP_000085982.1;Name=WP_000085982.1;gbkey=CDS;gene=mdtL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418166.1;locus_tag=AD08_RS03445;product=multidrug efflux MFS transporter MdtL;protein_id=WP_000085982.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 124311 125270 . + . ID=gene-AD08_RS03440;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=AD08_RS03440;old_locus_tag=AD08_4066 NZ_JHDJ01000180.1 Protein Homology CDS 124311 125270 . + 0 ID=cds-WP_001311238.1;Parent=gene-AD08_RS03440;Dbxref=Genbank:WP_001311238.1;Name=WP_001311238.1;gbkey=CDS;gene=yidZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418167.1;locus_tag=AD08_RS03440;product=HTH-type transcriptional regulator YidZ;protein_id=WP_001311238.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 125427 126176 . + . ID=gene-AD08_RS03435;Name=AD08_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03435;old_locus_tag=AD08_4067 NZ_JHDJ01000180.1 Protein Homology CDS 125427 126176 . + 0 ID=cds-WP_001296581.1;Parent=gene-AD08_RS03435;Dbxref=Genbank:WP_001296581.1;Name=WP_001296581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418168.2;locus_tag=AD08_RS03435;product=4'-phosphopantetheinyl transferase;protein_id=WP_001296581.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 126198 126764 . + . ID=gene-AD08_RS03430;Name=yieF;gbkey=Gene;gene=yieF;gene_biotype=protein_coding;locus_tag=AD08_RS03430;old_locus_tag=AD08_4068 NZ_JHDJ01000180.1 Protein Homology CDS 126198 126764 . + 0 ID=cds-WP_001291268.1;Parent=gene-AD08_RS03430;Dbxref=Genbank:WP_001291268.1;Name=WP_001291268.1;gbkey=CDS;gene=yieF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312677.1;locus_tag=AD08_RS03430;product=class I chromate reductase YieF;protein_id=WP_001291268.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq gene 126818 128155 . - . ID=gene-AD08_RS03425;Name=AD08_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03425;old_locus_tag=AD08_4069 NZ_JHDJ01000180.1 Protein Homology CDS 126818 128155 . - 0 ID=cds-WP_000019348.1;Parent=gene-AD08_RS03425;Dbxref=Genbank:WP_000019348.1;Name=WP_000019348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418170.1;locus_tag=AD08_RS03425;product=adenine permease AdeP;protein_id=WP_000019348.1;transl_table=11 NZ_JHDJ01000180.1 RefSeq pseudogene 128320 128844 . + . ID=gene-AD08_RS03420;Name=yieH;end_range=128844,.;gbkey=Gene;gene=yieH;gene_biotype=pseudogene;locus_tag=AD08_RS03420;old_locus_tag=AD08_4070;partial=true;pseudo=true NZ_JHDJ01000180.1 Protein Homology CDS 128320 128844 . + 0 ID=cds-AD08_RS03420;Parent=gene-AD08_RS03420;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=128844,.;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418171.1;locus_tag=AD08_RS03420;partial=true;product=6-phosphogluconate phosphatase;pseudo=true;transl_table=11 NZ_JHDJ01000180.1 RefSeq pseudogene 128899 129222 . + . ID=gene-AD08_RS03415;Name=AD08_RS03415;end_range=129222,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS03415;old_locus_tag=AD08_4071;partial=true;pseudo=true NZ_JHDJ01000180.1 Protein Homology CDS 128899 129222 . + 0 ID=cds-AD08_RS03415;Parent=gene-AD08_RS03415;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=129222,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS03415;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JHDJ01000180.1 cmsearch sequence_feature 129180 129231 . + . ID=id-NZ_JHDJ01000180.1:129180..129231;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;end_range=129231,.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;partial=true ##sequence-region NZ_JHDJ01000181.1 1 35732 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000181.1 RefSeq region 1 35732 . + . ID=NZ_JHDJ01000181.1:1..35732;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000181.1 RefSeq gene 1 396 . + . ID=gene-AD08_RS03410;Name=AD08_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03410;old_locus_tag=AD08_4072;partial=true;start_range=.,1 NZ_JHDJ01000181.1 Protein Homology CDS 1 396 . + 0 ID=cds-WP_032219365.1;Parent=gene-AD08_RS03410;Dbxref=Genbank:WP_032219365.1;Name=WP_032219365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS03410;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_032219365.1;start_range=.,1;transl_table=11 NZ_JHDJ01000181.1 RefSeq pseudogene 362 457 . + . ID=gene-AD08_RS31820;Name=AD08_RS31820;end_range=457,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31820;partial=true;pseudo=true NZ_JHDJ01000181.1 Protein Homology CDS 362 457 . + 0 ID=cds-AD08_RS31820;Parent=gene-AD08_RS31820;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=457,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310823.2;locus_tag=AD08_RS31820;partial=true;product=PapI protein;pseudo=true;transl_table=11 NZ_JHDJ01000181.1 RefSeq pseudogene 436 582 . + . ID=gene-AD08_RS31390;Name=AD08_RS31390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31390;old_locus_tag=AD08_4073;partial=true;pseudo=true;start_range=.,436 NZ_JHDJ01000181.1 Protein Homology CDS 436 582 . + 0 ID=cds-AD08_RS31390;Parent=gene-AD08_RS31390;Note=YieH%3B catalyzes the dephosphorylation of phosphoenolpyruvate%2C AMP and p-nitrophenyl phosphate%3B purine and pyrimidine nucleotides are secondary substrates%3B member of the haloacid dehalogenase-like hydrolases superfamily%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418171.1;locus_tag=AD08_RS31390;partial=true;product=6-phosphogluconate phosphatase;pseudo=true;start_range=.,436;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 649 1116 . + . ID=gene-AD08_RS0126915;Name=AD08_RS0126915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126915 NZ_JHDJ01000181.1 Protein Homology CDS 649 1116 . + 0 ID=cds-WP_000116777.1;Parent=gene-AD08_RS0126915;Dbxref=Genbank:WP_000116777.1;Name=WP_000116777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418172.1;locus_tag=AD08_RS0126915;product=protein CbrB;protein_id=WP_000116777.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 1165 1752 . + . ID=gene-AD08_RS03405;Name=AD08_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03405;old_locus_tag=AD08_4075 NZ_JHDJ01000181.1 Protein Homology CDS 1165 1752 . + 0 ID=cds-WP_000193072.1;Parent=gene-AD08_RS03405;Dbxref=Genbank:WP_000193072.1;Name=WP_000193072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418173.1;locus_tag=AD08_RS03405;product=CbrC family protein;protein_id=WP_000193072.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 1814 2536 . - . ID=gene-AD08_RS03400;Name=AD08_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03400;old_locus_tag=AD08_4076 NZ_JHDJ01000181.1 Protein Homology CDS 1814 2536 . - 0 ID=cds-WP_000766900.1;Parent=gene-AD08_RS03400;Dbxref=Genbank:WP_000766900.1;Name=WP_000766900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026242.1;locus_tag=AD08_RS03400;product=glucosamine-6-phosphate deaminase;protein_id=WP_000766900.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 2551 3720 . - . ID=gene-AD08_RS03395;Name=AD08_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03395;old_locus_tag=AD08_4077 NZ_JHDJ01000181.1 Protein Homology CDS 2551 3720 . - 0 ID=cds-WP_001336377.1;Parent=gene-AD08_RS03395;Dbxref=Genbank:WP_001336377.1;Name=WP_001336377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418175.3;locus_tag=AD08_RS03395;product=xylanase;protein_id=WP_001336377.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 3747 5363 . - . ID=gene-AD08_RS03390;Name=AD08_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03390;old_locus_tag=AD08_4078 NZ_JHDJ01000181.1 Protein Homology CDS 3747 5363 . - 0 ID=cds-WP_032219362.1;Parent=gene-AD08_RS03390;Dbxref=Genbank:WP_032219362.1;Name=WP_032219362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418176.1;locus_tag=AD08_RS03390;product=carbohydrate-specific porin BglH;protein_id=WP_032219362.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 5432 6844 . - . ID=gene-AD08_RS03385;Name=AD08_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03385;old_locus_tag=AD08_4079 NZ_JHDJ01000181.1 Protein Homology CDS 5432 6844 . - 0 ID=cds-WP_000643228.1;Parent=gene-AD08_RS03385;Dbxref=Genbank:WP_000643228.1;Name=WP_000643228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418177.1;locus_tag=AD08_RS03385;product=6-phospho-beta-glucosidase BglB;protein_id=WP_000643228.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 6863 8740 . - . ID=gene-AD08_RS03380;Name=bglF;gbkey=Gene;gene=bglF;gene_biotype=protein_coding;locus_tag=AD08_RS03380;old_locus_tag=AD08_4080 NZ_JHDJ01000181.1 Protein Homology CDS 6863 8740 . - 0 ID=cds-WP_000137296.1;Parent=gene-AD08_RS03380;Dbxref=Genbank:WP_000137296.1;Name=WP_000137296.1;gbkey=CDS;gene=bglF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418178.1;locus_tag=AD08_RS03380;product=PTS beta-glucoside transporter subunit IIABC;protein_id=WP_000137296.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 8873 9709 . - . ID=gene-AD08_RS03375;Name=bglG;gbkey=Gene;gene=bglG;gene_biotype=protein_coding;locus_tag=AD08_RS03375;old_locus_tag=AD08_4081 NZ_JHDJ01000181.1 Protein Homology CDS 8873 9709 . - 0 ID=cds-WP_001295251.1;Parent=gene-AD08_RS03375;Dbxref=Genbank:WP_001295251.1;Name=WP_001295251.1;gbkey=CDS;gene=bglG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418179.1;locus_tag=AD08_RS03375;product=transcriptional antiterminator BglG;protein_id=WP_001295251.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 9995 10720 . - . ID=gene-AD08_RS03370;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=AD08_RS03370;old_locus_tag=AD08_4083 NZ_JHDJ01000181.1 Protein Homology CDS 9995 10720 . - 0 ID=cds-WP_000377786.1;Parent=gene-AD08_RS03370;Dbxref=Genbank:WP_000377786.1;Name=WP_000377786.1;gbkey=CDS;gene=phoU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418180.1;locus_tag=AD08_RS03370;product=phosphate signaling complex protein PhoU;protein_id=WP_000377786.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 10735 11508 . - . ID=gene-AD08_RS03365;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AD08_RS03365;old_locus_tag=AD08_4084 NZ_JHDJ01000181.1 Protein Homology CDS 10735 11508 . - 0 ID=cds-WP_000063125.1;Parent=gene-AD08_RS03365;Dbxref=Genbank:WP_000063125.1;Name=WP_000063125.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=AD08_RS03365;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063125.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 11691 12581 . - . ID=gene-AD08_RS03360;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AD08_RS03360;old_locus_tag=AD08_4085 NZ_JHDJ01000181.1 Protein Homology CDS 11691 12581 . - 0 ID=cds-WP_001251998.1;Parent=gene-AD08_RS03360;Dbxref=Genbank:WP_001251998.1;Name=WP_001251998.1;gbkey=CDS;gene=pstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418182.1;locus_tag=AD08_RS03360;product=phosphate ABC transporter permease PstA;protein_id=WP_001251998.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 12581 13540 . - . ID=gene-AD08_RS03355;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=AD08_RS03355;old_locus_tag=AD08_4086 NZ_JHDJ01000181.1 Protein Homology CDS 12581 13540 . - 0 ID=cds-WP_000741620.1;Parent=gene-AD08_RS03355;Dbxref=Genbank:WP_000741620.1;Name=WP_000741620.1;gbkey=CDS;gene=pstC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=AD08_RS03355;product=phosphate ABC transporter permease PstC;protein_id=WP_000741620.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 13627 14667 . - . ID=gene-AD08_RS03350;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AD08_RS03350;old_locus_tag=AD08_4087 NZ_JHDJ01000181.1 Protein Homology CDS 13627 14667 . - 0 ID=cds-WP_000867146.1;Parent=gene-AD08_RS03350;Dbxref=Genbank:WP_000867146.1;Name=WP_000867146.1;gbkey=CDS;gene=pstS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418184.1;locus_tag=AD08_RS03350;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867146.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 14981 16810 . - . ID=gene-AD08_RS03345;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=AD08_RS03345;old_locus_tag=AD08_4088 NZ_JHDJ01000181.1 Protein Homology CDS 14981 16810 . - 0 ID=cds-WP_001428507.1;Parent=gene-AD08_RS03345;Dbxref=Genbank:WP_001428507.1;Name=WP_001428507.1;gbkey=CDS;gene=glmS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=AD08_RS03345;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_001428507.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 16972 18342 . - . ID=gene-AD08_RS03340;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AD08_RS03340;old_locus_tag=AD08_4089 NZ_JHDJ01000181.1 Protein Homology CDS 16972 18342 . - 0 ID=cds-WP_000933736.1;Parent=gene-AD08_RS03340;Dbxref=Genbank:WP_000933736.1;Name=WP_000933736.1;gbkey=CDS;gene=glmU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312699.1;locus_tag=AD08_RS03340;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000933736.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 18695 19114 . - . ID=gene-AD08_RS03335;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=AD08_RS03335;old_locus_tag=AD08_4090 NZ_JHDJ01000181.1 Protein Homology CDS 18695 19114 . - 0 ID=cds-WP_001251965.1;Parent=gene-AD08_RS03335;Dbxref=Genbank:WP_001251965.1;Name=WP_001251965.1;gbkey=CDS;gene=atpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=AD08_RS03335;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251965.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 19135 20517 . - . ID=gene-AD08_RS03330;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=AD08_RS03330;old_locus_tag=AD08_4091 NZ_JHDJ01000181.1 Protein Homology CDS 19135 20517 . - 0 ID=cds-WP_000190503.1;Parent=gene-AD08_RS03330;Dbxref=Genbank:WP_000190503.1;Name=WP_000190503.1;gbkey=CDS;gene=atpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=AD08_RS03330;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190503.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 20544 21407 . - . ID=gene-AD08_RS03325;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=AD08_RS03325;old_locus_tag=AD08_4092 NZ_JHDJ01000181.1 Protein Homology CDS 20544 21407 . - 0 ID=cds-WP_000896498.1;Parent=gene-AD08_RS03325;Dbxref=Genbank:WP_000896498.1;Name=WP_000896498.1;gbkey=CDS;gene=atpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=AD08_RS03325;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896498.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 21458 22999 . - . ID=gene-AD08_RS03320;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=AD08_RS03320;old_locus_tag=AD08_4093 NZ_JHDJ01000181.1 Protein Homology CDS 21458 22999 . - 0 ID=cds-WP_001176745.1;Parent=gene-AD08_RS03320;Dbxref=Genbank:WP_001176745.1;Name=WP_001176745.1;gbkey=CDS;gene=atpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=AD08_RS03320;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176745.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 23012 23545 . - . ID=gene-AD08_RS03315;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=AD08_RS03315;old_locus_tag=AD08_4094 NZ_JHDJ01000181.1 Protein Homology CDS 23012 23545 . - 0 ID=cds-WP_001288587.1;Parent=gene-AD08_RS03315;Dbxref=Genbank:WP_001288587.1;Name=WP_001288587.1;gbkey=CDS;gene=atpH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=AD08_RS03315;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288587.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 23560 24030 . - . ID=gene-AD08_RS03310;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=AD08_RS03310;old_locus_tag=AD08_4095 NZ_JHDJ01000181.1 Protein Homology CDS 23560 24030 . - 0 ID=cds-WP_001052219.1;Parent=gene-AD08_RS03310;Dbxref=Genbank:WP_001052219.1;Name=WP_001052219.1;gbkey=CDS;gene=atpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=AD08_RS03310;product=F0F1 ATP synthase subunit B;protein_id=WP_001052219.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 24092 24331 . - . ID=gene-AD08_RS03305;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=AD08_RS03305;old_locus_tag=AD08_4096 NZ_JHDJ01000181.1 Protein Homology CDS 24092 24331 . - 0 ID=cds-WP_000429386.1;Parent=gene-AD08_RS03305;Dbxref=Genbank:WP_000429386.1;Name=WP_000429386.1;gbkey=CDS;gene=atpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=AD08_RS03305;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 24378 25193 . - . ID=gene-AD08_RS03300;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=AD08_RS03300;old_locus_tag=AD08_4097 NZ_JHDJ01000181.1 Protein Homology CDS 24378 25193 . - 0 ID=cds-WP_000135625.1;Parent=gene-AD08_RS03300;Dbxref=Genbank:WP_000135625.1;Name=WP_000135625.1;gbkey=CDS;gene=atpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=AD08_RS03300;product=F0F1 ATP synthase subunit A;protein_id=WP_000135625.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 25202 25582 . - . ID=gene-AD08_RS0126920;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=AD08_RS0126920 NZ_JHDJ01000181.1 Protein Homology CDS 25202 25582 . - 0 ID=cds-WP_000116695.1;Parent=gene-AD08_RS0126920;Dbxref=Genbank:WP_000116695.1;Name=WP_000116695.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418195.2;locus_tag=AD08_RS0126920;product=F0F1 ATP synthase subunit I;protein_id=WP_000116695.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 26199 26822 . - . ID=gene-AD08_RS03295;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=AD08_RS03295;old_locus_tag=AD08_4099 NZ_JHDJ01000181.1 Protein Homology CDS 26199 26822 . - 0 ID=cds-WP_000932839.1;Parent=gene-AD08_RS03295;Dbxref=Genbank:WP_000932839.1;Name=WP_000932839.1;gbkey=CDS;gene=rsmG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312709.1;locus_tag=AD08_RS03295;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_000932839.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 26886 28775 . - . ID=gene-AD08_RS03290;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=AD08_RS03290;old_locus_tag=AD08_4100 NZ_JHDJ01000181.1 Protein Homology CDS 26886 28775 . - 0 ID=cds-WP_000499788.1;Parent=gene-AD08_RS03290;Dbxref=Genbank:WP_000499788.1;Name=WP_000499788.1;gbkey=CDS;gene=mnmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=AD08_RS03290;product=tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG;protein_id=WP_000499788.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 29154 29597 . - . ID=gene-AD08_RS03285;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=AD08_RS03285;old_locus_tag=AD08_4101 NZ_JHDJ01000181.1 Protein Homology CDS 29154 29597 . - 0 ID=cds-WP_000763724.1;Parent=gene-AD08_RS03285;Dbxref=Genbank:WP_000763724.1;Name=WP_000763724.1;gbkey=CDS;gene=mioC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418198.1;locus_tag=AD08_RS03285;product=FMN-binding protein MioC;protein_id=WP_000763724.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 29687 30145 . - . ID=gene-AD08_RS03280;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=AD08_RS03280;old_locus_tag=AD08_4102 NZ_JHDJ01000181.1 Protein Homology CDS 29687 30145 . - 0 ID=cds-WP_000432970.1;Parent=gene-AD08_RS03280;Dbxref=Genbank:WP_000432970.1;Name=WP_000432970.1;gbkey=CDS;gene=asnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312712.1;locus_tag=AD08_RS03280;product=transcriptional regulator AsnC;protein_id=WP_000432970.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 30297 31289 . + . ID=gene-AD08_RS03275;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=AD08_RS03275;old_locus_tag=AD08_4103 NZ_JHDJ01000181.1 Protein Homology CDS 30297 31289 . + 0 ID=cds-WP_032219364.1;Parent=gene-AD08_RS03275;Dbxref=Genbank:WP_032219364.1;Name=WP_032219364.1;gbkey=CDS;gene=asnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418200.1;locus_tag=AD08_RS03275;product=aspartate--ammonia ligase;protein_id=WP_032219364.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 31294 32745 . - . ID=gene-AD08_RS03270;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=AD08_RS03270;old_locus_tag=AD08_4104 NZ_JHDJ01000181.1 Protein Homology CDS 31294 32745 . - 0 ID=cds-WP_000956642.1;Parent=gene-AD08_RS03270;Dbxref=Genbank:WP_000956642.1;Name=WP_000956642.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=AD08_RS03270;product=ATPase RavA stimulator ViaA;protein_id=WP_000956642.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 32739 34235 . - . ID=gene-AD08_RS03265;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=AD08_RS03265;old_locus_tag=AD08_4105 NZ_JHDJ01000181.1 Protein Homology CDS 32739 34235 . - 0 ID=cds-WP_001299914.1;Parent=gene-AD08_RS03265;Dbxref=Genbank:WP_001299914.1;Name=WP_001299914.1;gbkey=CDS;gene=ravA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418202.4;locus_tag=AD08_RS03265;product=ATPase RavA;protein_id=WP_001299914.1;transl_table=11 NZ_JHDJ01000181.1 RefSeq gene 34338 35684 . - . ID=gene-AD08_RS03260;Name=AD08_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03260;old_locus_tag=AD08_4106 NZ_JHDJ01000181.1 Protein Homology CDS 34338 35684 . - 0 ID=cds-WP_000483767.1-4;Parent=gene-AD08_RS03260;Dbxref=Genbank:WP_000483767.1;Name=WP_000483767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AD08_RS03260;product=IS4-like element IS4 family transposase;protein_id=WP_000483767.1;transl_table=11 ##sequence-region NZ_JHDJ01000182.1 1 12574 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000182.1 RefSeq region 1 12574 . + . ID=NZ_JHDJ01000182.1:1..12574;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000182.1 RefSeq gene 1 1335 . - . ID=gene-AD08_RS03255;Name=AD08_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03255;old_locus_tag=AD08_4107;partial=true;start_range=.,1 NZ_JHDJ01000182.1 Protein Homology CDS 1 1335 . - 0 ID=cds-WP_032219368.1;Parent=gene-AD08_RS03255;Dbxref=Genbank:WP_032219368.1;Name=WP_032219368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AD08_RS03255;partial=true;product=IS4-like element IS4 family transposase;protein_id=WP_032219368.1;start_range=.,1;transl_table=11 NZ_JHDJ01000182.1 RefSeq gene 1547 3415 . + . ID=gene-AD08_RS03250;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=AD08_RS03250;old_locus_tag=AD08_4108 NZ_JHDJ01000182.1 Protein Homology CDS 1547 3415 . + 0 ID=cds-WP_000102319.1;Parent=gene-AD08_RS03250;Dbxref=Genbank:WP_000102319.1;Name=WP_000102319.1;gbkey=CDS;gene=kup;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=AD08_RS03250;product=low affinity potassium transporter Kup;protein_id=WP_000102319.1;transl_table=11 NZ_JHDJ01000182.1 RefSeq gene 3582 4001 . + . ID=gene-AD08_RS03245;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=AD08_RS03245;old_locus_tag=AD08_4109 NZ_JHDJ01000182.1 Protein Homology CDS 3582 4001 . + 0 ID=cds-WP_001301979.1;Parent=gene-AD08_RS03245;Dbxref=Genbank:WP_001301979.1;Name=WP_001301979.1;gbkey=CDS;gene=rbsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312717.1;locus_tag=AD08_RS03245;product=D-ribose pyranase;protein_id=WP_001301979.1;transl_table=11 NZ_JHDJ01000182.1 RefSeq gene 4009 5514 . + . ID=gene-AD08_RS03240;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=AD08_RS03240;old_locus_tag=AD08_4110 NZ_JHDJ01000182.1 Protein Homology CDS 4009 5514 . + 0 ID=cds-WP_001638552.1;Parent=gene-AD08_RS03240;Dbxref=Genbank:WP_001638552.1;Name=WP_001638552.1;gbkey=CDS;gene=rbsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418205.1;locus_tag=AD08_RS03240;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_001638552.1;transl_table=11 NZ_JHDJ01000182.1 RefSeq gene 5519 6484 . + . ID=gene-AD08_RS03235;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=AD08_RS03235;old_locus_tag=AD08_4111 NZ_JHDJ01000182.1 Protein Homology CDS 5519 6484 . + 0 ID=cds-WP_000211858.1;Parent=gene-AD08_RS03235;Dbxref=Genbank:WP_000211858.1;Name=WP_000211858.1;gbkey=CDS;gene=rbsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=AD08_RS03235;product=ribose ABC transporter permease;protein_id=WP_000211858.1;transl_table=11 NZ_JHDJ01000182.1 RefSeq gene 6509 7399 . + . ID=gene-AD08_RS03230;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=AD08_RS03230;old_locus_tag=AD08_4112 NZ_JHDJ01000182.1 Protein Homology CDS 6509 7399 . + 0 ID=cds-WP_001056273.1;Parent=gene-AD08_RS03230;Dbxref=Genbank:WP_001056273.1;Name=WP_001056273.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312720.1;locus_tag=AD08_RS03230;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056273.1;transl_table=11 NZ_JHDJ01000182.1 RefSeq pseudogene 7525 8455 . + . ID=gene-AD08_RS0126925;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=pseudogene;locus_tag=AD08_RS0126925;pseudo=true NZ_JHDJ01000182.1 Protein Homology CDS 7525 8455 . + 0 ID=cds-AD08_RS0126925;Parent=gene-AD08_RS0126925;Note=frameshifted;gbkey=CDS;gene=rbsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312721.1;locus_tag=AD08_RS0126925;product=ribokinase;pseudo=true;transl_table=11 NZ_JHDJ01000182.1 RefSeq gene 8459 9451 . + . ID=gene-AD08_RS03225;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=AD08_RS03225;old_locus_tag=AD08_4115 NZ_JHDJ01000182.1 Protein Homology CDS 8459 9451 . + 0 ID=cds-WP_000224470.1;Parent=gene-AD08_RS03225;Dbxref=Genbank:WP_000224470.1;Name=WP_000224470.1;gbkey=CDS;gene=rbsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312722.1;locus_tag=AD08_RS03225;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224470.1;transl_table=11 NZ_JHDJ01000182.1 RefSeq gene 9417 10844 . - . ID=gene-AD08_RS0126930;Name=AD08_RS0126930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126930 NZ_JHDJ01000182.1 Protein Homology CDS 9417 10844 . - 0 ID=cds-WP_001280852.1;Parent=gene-AD08_RS0126930;Dbxref=Genbank:WP_001280852.1;Name=WP_001280852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418210.1;locus_tag=AD08_RS0126930;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_001280852.1;transl_table=11 NZ_JHDJ01000182.1 RefSeq gene 10867 11559 . - . ID=gene-AD08_RS03220;Name=AD08_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03220;old_locus_tag=AD08_4118 NZ_JHDJ01000182.1 Protein Homology CDS 10867 11559 . - 0 ID=cds-WP_001131164.1;Parent=gene-AD08_RS03220;Dbxref=Genbank:WP_001131164.1;Name=WP_001131164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312724.2;locus_tag=AD08_RS03220;product=FadR family transcriptional regulator;protein_id=WP_001131164.1;transl_table=11 NZ_JHDJ01000182.1 RefSeq gene 12041 12574 . + . ID=gene-AD08_RS0126935;Name=AD08_RS0126935;end_range=12574,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS0126935;partial=true NZ_JHDJ01000182.1 RefSeq rRNA 12041 12574 . + . ID=rna-AD08_RS0126935;Parent=gene-AD08_RS0126935;end_range=12574,.;gbkey=rRNA;locus_tag=AD08_RS0126935;partial=true;product=16S ribosomal RNA NZ_JHDJ01000182.1 RefSeq exon 12041 12574 . + . ID=exon-AD08_RS0126935-1;Parent=rna-AD08_RS0126935;end_range=12574,.;gbkey=rRNA;locus_tag=AD08_RS0126935;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDJ01000183.1 1 90465 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000183.1 RefSeq region 1 90465 . + . ID=NZ_JHDJ01000183.1:1..90465;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000183.1 RefSeq gene 1 1023 . + . ID=gene-AD08_RS0126940;Name=AD08_RS0126940;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS0126940;partial=true;start_range=.,1 NZ_JHDJ01000183.1 RefSeq rRNA 1 1023 . + . ID=rna-AD08_RS0126940;Parent=gene-AD08_RS0126940;gbkey=rRNA;locus_tag=AD08_RS0126940;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDJ01000183.1 RefSeq exon 1 1023 . + . ID=exon-AD08_RS0126940-1;Parent=rna-AD08_RS0126940;gbkey=rRNA;locus_tag=AD08_RS0126940;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDJ01000183.1 RefSeq gene 1101 1216 . + . ID=gene-AD08_RS03215;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD08_RS03215;old_locus_tag=AD08_4121 NZ_JHDJ01000183.1 cmsearch rRNA 1101 1216 . + . ID=rna-AD08_RS03215;Parent=gene-AD08_RS03215;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS03215;product=5S ribosomal RNA NZ_JHDJ01000183.1 cmsearch exon 1101 1216 . + . ID=exon-AD08_RS03215-1;Parent=rna-AD08_RS03215;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS03215;product=5S ribosomal RNA NZ_JHDJ01000183.1 RefSeq gene 1271 1347 . + . ID=gene-AD08_RS03210;Name=AD08_RS03210;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS03210;old_locus_tag=AD08_4122 NZ_JHDJ01000183.1 tRNAscan-SE tRNA 1271 1347 . + . ID=rna-AD08_RS03210;Parent=gene-AD08_RS03210;anticodon=(pos:1305..1307);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS03210;product=tRNA-Asp NZ_JHDJ01000183.1 tRNAscan-SE exon 1271 1347 . + . ID=exon-AD08_RS03210-1;Parent=rna-AD08_RS03210;anticodon=(pos:1305..1307);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS03210;product=tRNA-Asp NZ_JHDJ01000183.1 RefSeq gene 1356 1431 . + . ID=gene-AD08_RS03205;Name=AD08_RS03205;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS03205;old_locus_tag=AD08_4123 NZ_JHDJ01000183.1 tRNAscan-SE tRNA 1356 1431 . + . ID=rna-AD08_RS03205;Parent=gene-AD08_RS03205;anticodon=(pos:1389..1391);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS03205;product=tRNA-Trp NZ_JHDJ01000183.1 tRNAscan-SE exon 1356 1431 . + . ID=exon-AD08_RS03205-1;Parent=rna-AD08_RS03205;anticodon=(pos:1389..1391);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS03205;product=tRNA-Trp NZ_JHDJ01000183.1 RefSeq gene 1527 2366 . - . ID=gene-AD08_RS03200;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=AD08_RS03200;old_locus_tag=AD08_4124 NZ_JHDJ01000183.1 Protein Homology CDS 1527 2366 . - 0 ID=cds-WP_001398063.1;Parent=gene-AD08_RS03200;Dbxref=Genbank:WP_001398063.1;Name=WP_001398063.1;gbkey=CDS;gene=hdfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709570.1;locus_tag=AD08_RS03200;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001398063.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 2485 2823 . + . ID=gene-AD08_RS03195;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=AD08_RS03195;old_locus_tag=AD08_4125 NZ_JHDJ01000183.1 Protein Homology CDS 2485 2823 . + 0 ID=cds-WP_000841001.1;Parent=gene-AD08_RS03195;Dbxref=Genbank:WP_000841001.1;Name=WP_000841001.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312726.1;locus_tag=AD08_RS03195;product=macrodomain Ori organization protein MaoP;protein_id=WP_000841001.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 2848 4368 . - . ID=gene-AD08_RS03190;Name=AD08_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03190;old_locus_tag=AD08_4126 NZ_JHDJ01000183.1 Protein Homology CDS 2848 4368 . - 0 ID=cds-WP_000058964.1;Parent=gene-AD08_RS03190;Dbxref=Genbank:WP_000058964.1;Name=WP_000058964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418214.2;locus_tag=AD08_RS03190;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_000058964.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 4721 4819 . + . ID=gene-AD08_RS0126945;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=AD08_RS0126945 NZ_JHDJ01000183.1 Protein Homology CDS 4721 4819 . + 0 ID=cds-WP_001311244.1;Parent=gene-AD08_RS0126945;Dbxref=Genbank:WP_001311244.1;Name=WP_001311244.1;gbkey=CDS;gene=ilvL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=AD08_RS0126945;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 4906 4956 . + . ID=gene-AD08_RS31400;Name=AD08_RS31400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31400 NZ_JHDJ01000183.1 Protein Homology CDS 4906 4956 . + 0 ID=cds-WP_001387183.1;Parent=gene-AD08_RS31400;Dbxref=Genbank:WP_001387183.1;Name=WP_001387183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=AD08_RS31400;product=hypothetical protein;protein_id=WP_001387183.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 4959 6605 . + . ID=gene-AD08_RS03185;Name=AD08_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03185;old_locus_tag=AD08_4127 NZ_JHDJ01000183.1 Protein Homology CDS 4959 6605 . + 0 ID=cds-WP_001012607.1;Parent=gene-AD08_RS03185;Dbxref=Genbank:WP_001012607.1;Name=WP_001012607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=AD08_RS03185;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012607.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 6602 6865 . + . ID=gene-AD08_RS03180;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=AD08_RS03180;old_locus_tag=AD08_4128 NZ_JHDJ01000183.1 Protein Homology CDS 6602 6865 . + 0 ID=cds-WP_000983255.1;Parent=gene-AD08_RS03180;Dbxref=Genbank:WP_000983255.1;Name=WP_000983255.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=AD08_RS03180;product=acetolactate synthase 2 small subunit;protein_id=WP_000983255.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 6885 7814 . + . ID=gene-AD08_RS03175;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=AD08_RS03175;old_locus_tag=AD08_4129 NZ_JHDJ01000183.1 Protein Homology CDS 6885 7814 . + 0 ID=cds-WP_032219369.1;Parent=gene-AD08_RS03175;Dbxref=Genbank:WP_032219369.1;Name=WP_032219369.1;gbkey=CDS;gene=ilvE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312731.1;locus_tag=AD08_RS03175;product=branched-chain-amino-acid transaminase;protein_id=WP_032219369.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 7879 9729 . + . ID=gene-AD08_RS03170;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=AD08_RS03170;old_locus_tag=AD08_4130 NZ_JHDJ01000183.1 Protein Homology CDS 7879 9729 . + 0 ID=cds-WP_001127399.1;Parent=gene-AD08_RS03170;Dbxref=Genbank:WP_001127399.1;Name=WP_001127399.1;gbkey=CDS;gene=ilvD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=AD08_RS03170;product=dihydroxy-acid dehydratase;protein_id=WP_001127399.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 9732 11276 . + . ID=gene-AD08_RS03165;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=AD08_RS03165;old_locus_tag=AD08_4131 NZ_JHDJ01000183.1 Protein Homology CDS 9732 11276 . + 0 ID=cds-WP_000785596.1;Parent=gene-AD08_RS03165;Dbxref=Genbank:WP_000785596.1;Name=WP_000785596.1;gbkey=CDS;gene=ilvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418220.1;locus_tag=AD08_RS03165;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_000785596.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 11328 12221 . - . ID=gene-AD08_RS03160;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=AD08_RS03160;old_locus_tag=AD08_4132 NZ_JHDJ01000183.1 Protein Homology CDS 11328 12221 . - 0 ID=cds-WP_000365791.1;Parent=gene-AD08_RS03160;Dbxref=Genbank:WP_000365791.1;Name=WP_000365791.1;gbkey=CDS;gene=ilvY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418221.1;locus_tag=AD08_RS03160;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365791.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 12371 13846 . + . ID=gene-AD08_RS03155;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=AD08_RS03155;old_locus_tag=AD08_4133 NZ_JHDJ01000183.1 Protein Homology CDS 12371 13846 . + 0 ID=cds-WP_000024939.1;Parent=gene-AD08_RS03155;Dbxref=Genbank:WP_000024939.1;Name=WP_000024939.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=AD08_RS03155;product=ketol-acid reductoisomerase;protein_id=WP_000024939.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 13933 14214 . - . ID=gene-AD08_RS03150;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=AD08_RS03150;old_locus_tag=AD08_4134 NZ_JHDJ01000183.1 Protein Homology CDS 13933 14214 . - 0 ID=cds-WP_001140251.1;Parent=gene-AD08_RS03150;Dbxref=Genbank:WP_001140251.1;Name=WP_001140251.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097481.1;locus_tag=AD08_RS03150;product=peptidylprolyl isomerase PpiC;protein_id=WP_001140251.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq pseudogene 14413 14861 . - . ID=gene-AD08_RS31405;Name=AD08_RS31405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31405;pseudo=true NZ_JHDJ01000183.1 Protein Homology CDS 14413 14861 . - 0 ID=cds-AD08_RS31405;Parent=gene-AD08_RS31405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312737.1;locus_tag=AD08_RS31405;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 15078 17099 . + . ID=gene-AD08_RS03145;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=AD08_RS03145;old_locus_tag=AD08_4135 NZ_JHDJ01000183.1 Protein Homology CDS 15078 17099 . + 0 ID=cds-WP_001238886.1;Parent=gene-AD08_RS03145;Dbxref=Genbank:WP_001238886.1;Name=WP_001238886.1;gbkey=CDS;gene=rep;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026251.1;locus_tag=AD08_RS03145;product=DNA helicase Rep;protein_id=WP_001238886.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 17146 18630 . - . ID=gene-AD08_RS03140;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=AD08_RS03140;old_locus_tag=AD08_4136 NZ_JHDJ01000183.1 Protein Homology CDS 17146 18630 . - 0 ID=cds-WP_001295254.1;Parent=gene-AD08_RS03140;Dbxref=Genbank:WP_001295254.1;Name=WP_001295254.1;gbkey=CDS;gene=gppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312739.1;locus_tag=AD08_RS03140;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001295254.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 18766 20031 . - . ID=gene-AD08_RS03135;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=AD08_RS03135;old_locus_tag=AD08_4137 NZ_JHDJ01000183.1 Protein Homology CDS 18766 20031 . - 0 ID=cds-WP_000047499.1;Parent=gene-AD08_RS03135;Dbxref=Genbank:WP_000047499.1;Name=WP_000047499.1;gbkey=CDS;gene=rhlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418227.1;locus_tag=AD08_RS03135;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047499.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 20162 20491 . + . ID=gene-AD08_RS03130;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AD08_RS03130;old_locus_tag=AD08_4138 NZ_JHDJ01000183.1 Protein Homology CDS 20162 20491 . + 0 ID=cds-WP_001280776.1;Parent=gene-AD08_RS03130;Dbxref=Genbank:WP_001280776.1;Name=WP_001280776.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=AD08_RS03130;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 20632 20733 . + . ID=gene-AD08_RS0126955;Name=rhoL;gbkey=Gene;gene=rhoL;gene_biotype=protein_coding;locus_tag=AD08_RS0126955 NZ_JHDJ01000183.1 Protein Homology CDS 20632 20733 . + 0 ID=cds-WP_001295255.1;Parent=gene-AD08_RS0126955;Dbxref=Genbank:WP_001295255.1;Name=WP_001295255.1;gbkey=CDS;gene=rhoL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=AD08_RS0126955;product=rho operon leader peptide rhoL;protein_id=WP_001295255.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 20818 22077 . + . ID=gene-AD08_RS03125;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AD08_RS03125;old_locus_tag=AD08_4139 NZ_JHDJ01000183.1 Protein Homology CDS 20818 22077 . + 0 ID=cds-WP_001054527.1;Parent=gene-AD08_RS03125;Dbxref=Genbank:WP_001054527.1;Name=WP_001054527.1;gbkey=CDS;gene=rho;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312743.1;locus_tag=AD08_RS03125;product=transcription termination factor Rho;protein_id=WP_001054527.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 22317 23420 . + . ID=gene-AD08_RS03115;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=AD08_RS03115;old_locus_tag=AD08_4141 NZ_JHDJ01000183.1 Protein Homology CDS 22317 23420 . + 0 ID=cds-WP_001050960.1;Parent=gene-AD08_RS03115;Dbxref=Genbank:WP_001050960.1;Name=WP_001050960.1;gbkey=CDS;gene=wecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418231.1;locus_tag=AD08_RS03115;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_001050960.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 23432 24478 . + . ID=gene-AD08_RS03110;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=AD08_RS03110;old_locus_tag=AD08_4142 NZ_JHDJ01000183.1 Protein Homology CDS 23432 24478 . + 0 ID=cds-WP_001456763.1;Parent=gene-AD08_RS03110;Dbxref=Genbank:WP_001456763.1;Name=WP_001456763.1;gbkey=CDS;gene=wzzE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709589.2;locus_tag=AD08_RS03110;product=ECA polysaccharide chain length modulation protein;protein_id=WP_001456763.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 24534 25664 . + . ID=gene-AD08_RS03105;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=AD08_RS03105;old_locus_tag=AD08_4143 NZ_JHDJ01000183.1 Protein Homology CDS 24534 25664 . + 0 ID=cds-WP_001340422.1;Parent=gene-AD08_RS03105;Dbxref=Genbank:WP_001340422.1;Name=WP_001340422.1;gbkey=CDS;gene=wecB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026253.1;locus_tag=AD08_RS03105;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WP_001340422.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 25661 26923 . + . ID=gene-AD08_RS03100;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=AD08_RS03100;old_locus_tag=AD08_4144 NZ_JHDJ01000183.1 Protein Homology CDS 25661 26923 . + 0 ID=cds-WP_000006621.1;Parent=gene-AD08_RS03100;Dbxref=Genbank:WP_000006621.1;Name=WP_000006621.1;gbkey=CDS;gene=wecC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312747.1;locus_tag=AD08_RS03100;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000006621.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 26923 27990 . + . ID=gene-AD08_RS03095;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=AD08_RS03095;old_locus_tag=AD08_4145 NZ_JHDJ01000183.1 Protein Homology CDS 26923 27990 . + 0 ID=cds-WP_001226601.1;Parent=gene-AD08_RS03095;Dbxref=Genbank:WP_001226601.1;Name=WP_001226601.1;gbkey=CDS;gene=rffG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026255.1;locus_tag=AD08_RS03095;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_001226601.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 28009 28890 . + . ID=gene-AD08_RS03090;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AD08_RS03090;old_locus_tag=AD08_4146 NZ_JHDJ01000183.1 Protein Homology CDS 28009 28890 . + 0 ID=cds-WP_000676056.1;Parent=gene-AD08_RS03090;Dbxref=Genbank:WP_000676056.1;Name=WP_000676056.1;gbkey=CDS;gene=rfbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=AD08_RS03090;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000676056.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 28868 29542 . + . ID=gene-AD08_RS03085;Name=AD08_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03085;old_locus_tag=AD08_4147 NZ_JHDJ01000183.1 Protein Homology CDS 28868 29542 . + 0 ID=cds-WP_001145183.1;Parent=gene-AD08_RS03085;Dbxref=Genbank:WP_001145183.1;Name=WP_001145183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=AD08_RS03085;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145183.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 29547 30677 . + . ID=gene-AD08_RS03080;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=AD08_RS03080;old_locus_tag=AD08_4148 NZ_JHDJ01000183.1 Protein Homology CDS 29547 30677 . + 0 ID=cds-WP_001414359.1;Parent=gene-AD08_RS03080;Dbxref=Genbank:WP_001414359.1;Name=WP_001414359.1;gbkey=CDS;gene=rffA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418238.1;locus_tag=AD08_RS03080;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_001414359.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 30679 31929 . + . ID=gene-AD08_RS03075;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=AD08_RS03075;old_locus_tag=AD08_4149 NZ_JHDJ01000183.1 Protein Homology CDS 30679 31929 . + 0 ID=cds-WP_000050265.1;Parent=gene-AD08_RS03075;Dbxref=Genbank:WP_000050265.1;Name=WP_000050265.1;gbkey=CDS;gene=wzxE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418239.1;locus_tag=AD08_RS03075;product=lipid III flippase WzxE;protein_id=WP_000050265.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 31926 33005 . + . ID=gene-AD08_RS03070;Name=rffT;gbkey=Gene;gene=rffT;gene_biotype=protein_coding;gene_synonym=wecF;locus_tag=AD08_RS03070;old_locus_tag=AD08_4150 NZ_JHDJ01000183.1 Protein Homology CDS 31926 33005 . + 0 ID=cds-WP_000217233.1;Parent=gene-AD08_RS03070;Dbxref=Genbank:WP_000217233.1;Name=WP_000217233.1;gbkey=CDS;gene=rffT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026257.1;locus_tag=AD08_RS03070;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217233.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 33002 34354 . + . ID=gene-AD08_RS03065;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=AD08_RS03065;old_locus_tag=AD08_4151 NZ_JHDJ01000183.1 Protein Homology CDS 33002 34354 . + 0 ID=cds-WP_000055129.1;Parent=gene-AD08_RS03065;Dbxref=Genbank:WP_000055129.1;Name=WP_000055129.1;gbkey=CDS;gene=wzyE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418241.1;locus_tag=AD08_RS03065;product=O-antigen assembly polymerase;protein_id=WP_000055129.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 34357 35097 . + . ID=gene-AD08_RS03060;Name=rffM;gbkey=Gene;gene=rffM;gene_biotype=protein_coding;locus_tag=AD08_RS03060;old_locus_tag=AD08_4152 NZ_JHDJ01000183.1 Protein Homology CDS 34357 35097 . + 0 ID=cds-WP_001064040.1;Parent=gene-AD08_RS03060;Dbxref=Genbank:WP_001064040.1;Name=WP_001064040.1;gbkey=CDS;gene=rffM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418242.1;locus_tag=AD08_RS03060;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_001064040.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 35288 36673 . + . ID=gene-AD08_RS03055;Name=AD08_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03055;old_locus_tag=AD08_4153 NZ_JHDJ01000183.1 Protein Homology CDS 35288 36673 . + 0 ID=cds-WP_000774731.1;Parent=gene-AD08_RS03055;Dbxref=Genbank:WP_000774731.1;Name=WP_000774731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312756.1;locus_tag=AD08_RS03055;product=amino acid permease;protein_id=WP_000774731.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 36776 36852 . + . ID=gene-AD08_RS03050;Name=AD08_RS03050;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS03050;old_locus_tag=AD08_4154 NZ_JHDJ01000183.1 tRNAscan-SE tRNA 36776 36852 . + . ID=rna-AD08_RS03050;Parent=gene-AD08_RS03050;anticodon=(pos:36810..36812);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS03050;product=tRNA-Arg NZ_JHDJ01000183.1 tRNAscan-SE exon 36776 36852 . + . ID=exon-AD08_RS03050-1;Parent=rna-AD08_RS03050;anticodon=(pos:36810..36812);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS03050;product=tRNA-Arg NZ_JHDJ01000183.1 RefSeq gene 36911 36986 . + . ID=gene-AD08_RS03045;Name=AD08_RS03045;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS03045;old_locus_tag=AD08_4155 NZ_JHDJ01000183.1 tRNAscan-SE tRNA 36911 36986 . + . ID=rna-AD08_RS03045;Parent=gene-AD08_RS03045;anticodon=(pos:36944..36946);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS03045;product=tRNA-His NZ_JHDJ01000183.1 tRNAscan-SE exon 36911 36986 . + . ID=exon-AD08_RS03045-1;Parent=rna-AD08_RS03045;anticodon=(pos:36944..36946);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS03045;product=tRNA-His NZ_JHDJ01000183.1 RefSeq gene 37007 37093 . + . ID=gene-AD08_RS03040;Name=AD08_RS03040;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS03040;old_locus_tag=AD08_4156 NZ_JHDJ01000183.1 tRNAscan-SE tRNA 37007 37093 . + . ID=rna-AD08_RS03040;Parent=gene-AD08_RS03040;anticodon=(pos:37041..37043);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS03040;product=tRNA-Leu NZ_JHDJ01000183.1 tRNAscan-SE exon 37007 37093 . + . ID=exon-AD08_RS03040-1;Parent=rna-AD08_RS03040;anticodon=(pos:37041..37043);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS03040;product=tRNA-Leu NZ_JHDJ01000183.1 RefSeq gene 37136 37212 . + . ID=gene-AD08_RS03035;Name=AD08_RS03035;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS03035;old_locus_tag=AD08_4157 NZ_JHDJ01000183.1 tRNAscan-SE tRNA 37136 37212 . + . ID=rna-AD08_RS03035;Parent=gene-AD08_RS03035;anticodon=(pos:37170..37172);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS03035;product=tRNA-Pro NZ_JHDJ01000183.1 tRNAscan-SE exon 37136 37212 . + . ID=exon-AD08_RS03035-1;Parent=rna-AD08_RS03035;anticodon=(pos:37170..37172);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS03035;product=tRNA-Pro NZ_JHDJ01000183.1 RefSeq gene 37359 38594 . + . ID=gene-AD08_RS03030;Name=AD08_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03030;old_locus_tag=AD08_4158 NZ_JHDJ01000183.1 Protein Homology CDS 37359 38594 . + 0 ID=cds-WP_000941517.1;Parent=gene-AD08_RS03030;Dbxref=Genbank:WP_000941517.1;Name=WP_000941517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026259.1;locus_tag=AD08_RS03030;product=anaerobic sulfatase maturase AslB;protein_id=WP_000941517.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 38753 40408 . - . ID=gene-AD08_RS03025;Name=AD08_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS03025;old_locus_tag=AD08_4159 NZ_JHDJ01000183.1 Protein Homology CDS 38753 40408 . - 0 ID=cds-WP_032219373.1;Parent=gene-AD08_RS03025;Dbxref=Genbank:WP_032219373.1;Name=WP_032219373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418245.1;locus_tag=AD08_RS03025;product=arylsulfatase AslA;protein_id=WP_032219373.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 41087 42283 . - . ID=gene-AD08_RS03020;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=AD08_RS03020;old_locus_tag=AD08_4161 NZ_JHDJ01000183.1 Protein Homology CDS 41087 42283 . - 0 ID=cds-WP_000921791.1;Parent=gene-AD08_RS03020;Dbxref=Genbank:WP_000921791.1;Name=WP_000921791.1;gbkey=CDS;gene=hemY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=AD08_RS03020;product=protoheme IX biogenesis protein HemY;protein_id=WP_000921791.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 42286 43467 . - . ID=gene-AD08_RS03015;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=AD08_RS03015;old_locus_tag=AD08_4162 NZ_JHDJ01000183.1 Protein Homology CDS 42286 43467 . - 0 ID=cds-WP_032219374.1;Parent=gene-AD08_RS03015;Dbxref=Genbank:WP_032219374.1;Name=WP_032219374.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418247.1;locus_tag=AD08_RS03015;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_032219374.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 43489 44229 . - . ID=gene-AD08_RS03010;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=AD08_RS03010;old_locus_tag=AD08_4163 NZ_JHDJ01000183.1 Protein Homology CDS 43489 44229 . - 0 ID=cds-WP_000026046.1;Parent=gene-AD08_RS03010;Dbxref=Genbank:WP_000026046.1;Name=WP_000026046.1;gbkey=CDS;gene=hemD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418248.1;locus_tag=AD08_RS03010;product=uroporphyrinogen-III synthase;protein_id=WP_000026046.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 44226 45167 . - . ID=gene-AD08_RS03005;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=AD08_RS03005;old_locus_tag=AD08_4164 NZ_JHDJ01000183.1 Protein Homology CDS 44226 45167 . - 0 ID=cds-WP_001338644.1;Parent=gene-AD08_RS03005;Dbxref=Genbank:WP_001338644.1;Name=WP_001338644.1;gbkey=CDS;gene=hemC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=AD08_RS03005;product=hydroxymethylbilane synthase;protein_id=WP_001338644.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 45554 48100 . + . ID=gene-AD08_RS03000;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=AD08_RS03000;old_locus_tag=AD08_4165 NZ_JHDJ01000183.1 Protein Homology CDS 45554 48100 . + 0 ID=cds-WP_000281668.1;Parent=gene-AD08_RS03000;Dbxref=Genbank:WP_000281668.1;Name=WP_000281668.1;gbkey=CDS;gene=cyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418250.1;locus_tag=AD08_RS03000;product=class I adenylate cyclase;protein_id=WP_000281668.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 48140 48460 . - . ID=gene-AD08_RS02995;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=AD08_RS02995;old_locus_tag=AD08_4166 NZ_JHDJ01000183.1 Protein Homology CDS 48140 48460 . - 0 ID=cds-WP_000999947.1;Parent=gene-AD08_RS02995;Dbxref=Genbank:WP_000999947.1;Name=WP_000999947.1;gbkey=CDS;gene=cyaY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=AD08_RS02995;product=iron donor protein CyaY;protein_id=WP_000999947.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 48923 49126 . + . ID=gene-AD08_RS02990;Name=AD08_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02990;old_locus_tag=AD08_4168 NZ_JHDJ01000183.1 Protein Homology CDS 48923 49126 . + 0 ID=cds-WP_032219376.1;Parent=gene-AD08_RS02990;Dbxref=Genbank:WP_032219376.1;Name=WP_032219376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709615.1;locus_tag=AD08_RS02990;product=lipoprotein;protein_id=WP_032219376.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 49163 49987 . + . ID=gene-AD08_RS02985;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=AD08_RS02985;old_locus_tag=AD08_4169 NZ_JHDJ01000183.1 Protein Homology CDS 49163 49987 . + 0 ID=cds-WP_001160654.1;Parent=gene-AD08_RS02985;Dbxref=Genbank:WP_001160654.1;Name=WP_001160654.1;gbkey=CDS;gene=dapF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=AD08_RS02985;product=diaminopimelate epimerase;protein_id=WP_001160654.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 49984 50691 . + . ID=gene-AD08_RS02980;Name=AD08_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02980;old_locus_tag=AD08_4170 NZ_JHDJ01000183.1 Protein Homology CDS 49984 50691 . + 0 ID=cds-WP_000812796.1;Parent=gene-AD08_RS02980;Dbxref=Genbank:WP_000812796.1;Name=WP_000812796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418255.1;locus_tag=AD08_RS02980;product=DUF484 domain-containing protein;protein_id=WP_000812796.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 50688 51584 . + . ID=gene-AD08_RS02975;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=AD08_RS02975;old_locus_tag=AD08_4171 NZ_JHDJ01000183.1 Protein Homology CDS 50688 51584 . + 0 ID=cds-WP_000130691.1;Parent=gene-AD08_RS02975;Dbxref=Genbank:WP_000130691.1;Name=WP_000130691.1;gbkey=CDS;gene=xerC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418256.1;locus_tag=AD08_RS02975;product=tyrosine recombinase XerC;protein_id=WP_000130691.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 51584 52300 . + . ID=gene-AD08_RS02970;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=AD08_RS02970;old_locus_tag=AD08_4172 NZ_JHDJ01000183.1 Protein Homology CDS 51584 52300 . + 0 ID=cds-WP_001213584.1;Parent=gene-AD08_RS02970;Dbxref=Genbank:WP_001213584.1;Name=WP_001213584.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418257.1;locus_tag=AD08_RS02970;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213584.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 52384 54546 . + . ID=gene-AD08_RS02965;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=AD08_RS02965;old_locus_tag=AD08_4173 NZ_JHDJ01000183.1 Protein Homology CDS 52384 54546 . + 0 ID=cds-WP_000383406.1;Parent=gene-AD08_RS02965;Dbxref=Genbank:WP_000383406.1;Name=WP_000383406.1;gbkey=CDS;gene=uvrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418258.1;locus_tag=AD08_RS02965;product=DNA helicase II;protein_id=WP_000383406.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 54693 55457 . - . ID=gene-AD08_RS02960;Name=AD08_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02960;old_locus_tag=AD08_4174 NZ_JHDJ01000183.1 Protein Homology CDS 54693 55457 . - 0 ID=cds-WP_000951133.1;Parent=gene-AD08_RS02960;Dbxref=Genbank:WP_000951133.1;Name=WP_000951133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026261.1;locus_tag=AD08_RS02960;product=phosphodiester glycosidase family protein;protein_id=WP_000951133.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 55827 56777 . + . ID=gene-AD08_RS02950;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=AD08_RS02950;old_locus_tag=AD08_4176 NZ_JHDJ01000183.1 Protein Homology CDS 55827 56777 . + 0 ID=cds-WP_001467735.1;Parent=gene-AD08_RS02950;Dbxref=Genbank:WP_001467735.1;Name=WP_001467735.1;gbkey=CDS;gene=corA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=AD08_RS02950;product=magnesium/cobalt transporter CorA;protein_id=WP_001467735.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 56820 57200 . - . ID=gene-AD08_RS02945;Name=AD08_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02945;old_locus_tag=AD08_4177 NZ_JHDJ01000183.1 Protein Homology CDS 56820 57200 . - 0 ID=cds-WP_000032581.1;Parent=gene-AD08_RS02945;Dbxref=Genbank:WP_000032581.1;Name=WP_000032581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418261.1;locus_tag=AD08_RS02945;product=DUF2628 domain-containing protein;protein_id=WP_000032581.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 57214 57630 . - . ID=gene-AD08_RS02940;Name=AD08_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02940;old_locus_tag=AD08_4178 NZ_JHDJ01000183.1 Protein Homology CDS 57214 57630 . - 0 ID=cds-WP_000955197.1;Parent=gene-AD08_RS02940;Dbxref=Genbank:WP_000955197.1;Name=WP_000955197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709624.2;locus_tag=AD08_RS02940;product=hypothetical protein;protein_id=WP_000955197.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 57689 58579 . - . ID=gene-AD08_RS02935;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=AD08_RS02935;old_locus_tag=AD08_4179 NZ_JHDJ01000183.1 Protein Homology CDS 57689 58579 . - 0 ID=cds-WP_000339104.1;Parent=gene-AD08_RS02935;Dbxref=Genbank:WP_000339104.1;Name=WP_000339104.1;gbkey=CDS;gene=rarD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026262.1;locus_tag=AD08_RS02935;product=EamA family transporter RarD;protein_id=WP_000339104.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 58631 59098 . - . ID=gene-AD08_RS02930;Name=AD08_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02930;old_locus_tag=AD08_4180 NZ_JHDJ01000183.1 Protein Homology CDS 58631 59098 . - 0 ID=cds-WP_001277142.1;Parent=gene-AD08_RS02930;Dbxref=Genbank:WP_001277142.1;Name=WP_001277142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001350877.1;locus_tag=AD08_RS02930;product=thioesterase family protein;protein_id=WP_001277142.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 59263 60132 . + . ID=gene-AD08_RS02925;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=AD08_RS02925;old_locus_tag=AD08_4181 NZ_JHDJ01000183.1 Protein Homology CDS 59263 60132 . + 0 ID=cds-WP_001259700.1;Parent=gene-AD08_RS02925;Dbxref=Genbank:WP_001259700.1;Name=WP_001259700.1;gbkey=CDS;gene=pldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312778.1;locus_tag=AD08_RS02925;product=phospholipase A;protein_id=WP_001259700.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 60265 62094 . + . ID=gene-AD08_RS02920;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=AD08_RS02920;old_locus_tag=AD08_4182 NZ_JHDJ01000183.1 Protein Homology CDS 60265 62094 . + 0 ID=cds-WP_000035581.1;Parent=gene-AD08_RS02920;Dbxref=Genbank:WP_000035581.1;Name=WP_000035581.1;gbkey=CDS;gene=recQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=AD08_RS02920;product=ATP-dependent DNA helicase RecQ;protein_id=WP_000035581.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 62158 62778 . + . ID=gene-AD08_RS02915;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=AD08_RS02915;old_locus_tag=AD08_4183 NZ_JHDJ01000183.1 Protein Homology CDS 62158 62778 . + 0 ID=cds-WP_000928824.1;Parent=gene-AD08_RS02915;Dbxref=Genbank:WP_000928824.1;Name=WP_000928824.1;gbkey=CDS;gene=rhtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312780.1;locus_tag=AD08_RS02915;product=threonine export protein RhtC;protein_id=WP_000928824.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 62840 63460 . - . ID=gene-AD08_RS02910;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=AD08_RS02910;old_locus_tag=AD08_4184 NZ_JHDJ01000183.1 Protein Homology CDS 62840 63460 . - 0 ID=cds-WP_001388715.1;Parent=gene-AD08_RS02910;Dbxref=Genbank:WP_001388715.1;Name=WP_001388715.1;gbkey=CDS;gene=rhtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312781.1;locus_tag=AD08_RS02910;product=homoserine/homoserine lactone efflux protein;protein_id=WP_001388715.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 63571 64593 . + . ID=gene-AD08_RS02905;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=AD08_RS02905;old_locus_tag=AD08_4185 NZ_JHDJ01000183.1 Protein Homology CDS 63571 64593 . + 0 ID=cds-WP_001461811.1;Parent=gene-AD08_RS02905;Dbxref=Genbank:WP_001461811.1;Name=WP_001461811.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026266.1;locus_tag=AD08_RS02905;product=lysophospholipase L2;protein_id=WP_001461811.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 64601 65401 . + . ID=gene-AD08_RS02900;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=AD08_RS02900;old_locus_tag=AD08_4186 NZ_JHDJ01000183.1 Protein Homology CDS 64601 65401 . + 0 ID=cds-WP_000285362.1;Parent=gene-AD08_RS02900;Dbxref=Genbank:WP_000285362.1;Name=WP_000285362.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026267.1;locus_tag=AD08_RS02900;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285362.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 65477 66376 . + . ID=gene-AD08_RS02895;Name=bioP;gbkey=Gene;gene=bioP;gene_biotype=protein_coding;locus_tag=AD08_RS02895;old_locus_tag=AD08_4187 NZ_JHDJ01000183.1 Protein Homology CDS 65477 66376 . + 0 ID=cds-WP_001196238.1;Parent=gene-AD08_RS02895;Dbxref=Genbank:WP_001196238.1;Name=WP_001196238.1;gbkey=CDS;gene=bioP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312784.1;locus_tag=AD08_RS02895;product=biotin transporter;protein_id=WP_001196238.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 66264 67217 . - . ID=gene-AD08_RS0126960;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=AD08_RS0126960 NZ_JHDJ01000183.1 Protein Homology CDS 66264 67217 . - 0 ID=cds-WP_000573621.1;Parent=gene-AD08_RS0126960;Dbxref=Genbank:WP_000573621.1;Name=WP_000573621.1;gbkey=CDS;gene=metR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312785.1;locus_tag=AD08_RS0126960;product=HTH-type transcriptional regulator MetR;protein_id=WP_000573621.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 67454 69715 . + . ID=gene-AD08_RS02890;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=AD08_RS02890;old_locus_tag=AD08_4188 NZ_JHDJ01000183.1 Protein Homology CDS 67454 69715 . + 0 ID=cds-WP_000153907.1;Parent=gene-AD08_RS02890;Dbxref=Genbank:WP_000153907.1;Name=WP_000153907.1;gbkey=CDS;gene=metE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418273.1;locus_tag=AD08_RS02890;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000153907.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 69755 70570 . - . ID=gene-AD08_RS02885;Name=AD08_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02885;old_locus_tag=AD08_4189 NZ_JHDJ01000183.1 Protein Homology CDS 69755 70570 . - 0 ID=cds-WP_001336442.1;Parent=gene-AD08_RS02885;Dbxref=Genbank:WP_001336442.1;Name=WP_001336442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026268.1;locus_tag=AD08_RS02885;product=dienelactone hydrolase family protein;protein_id=WP_001336442.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 70832 71593 . + . ID=gene-AD08_RS02880;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=AD08_RS02880;old_locus_tag=AD08_4190 NZ_JHDJ01000183.1 Protein Homology CDS 70832 71593 . + 0 ID=cds-WP_000045177.1;Parent=gene-AD08_RS02880;Dbxref=Genbank:WP_000045177.1;Name=WP_000045177.1;gbkey=CDS;gene=udp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418275.1;locus_tag=AD08_RS02880;product=uridine phosphorylase;protein_id=WP_000045177.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 71734 73161 . + . ID=gene-AD08_RS02875;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=AD08_RS02875;old_locus_tag=AD08_4191 NZ_JHDJ01000183.1 Protein Homology CDS 71734 73161 . + 0 ID=cds-WP_000347714.1;Parent=gene-AD08_RS02875;Dbxref=Genbank:WP_000347714.1;Name=WP_000347714.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312789.1;locus_tag=AD08_RS02875;product=DNA recombination protein RmuC;protein_id=WP_000347714.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 73256 74011 . + . ID=gene-AD08_RS02870;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=AD08_RS02870;old_locus_tag=AD08_4192 NZ_JHDJ01000183.1 Protein Homology CDS 73256 74011 . + 0 ID=cds-WP_000227958.1;Parent=gene-AD08_RS02870;Dbxref=Genbank:WP_000227958.1;Name=WP_000227958.1;gbkey=CDS;gene=ubiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312790.1;locus_tag=AD08_RS02870;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000227958.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 74025 74630 . + . ID=gene-AD08_RS02865;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=AD08_RS02865;old_locus_tag=AD08_4193 NZ_JHDJ01000183.1 Protein Homology CDS 74025 74630 . + 0 ID=cds-WP_001295259.1;Parent=gene-AD08_RS02865;Dbxref=Genbank:WP_001295259.1;Name=WP_001295259.1;gbkey=CDS;gene=ubiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418278.1;locus_tag=AD08_RS02865;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001295259.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 74627 76267 . + . ID=gene-AD08_RS02860;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=AD08_RS02860;old_locus_tag=AD08_4194 NZ_JHDJ01000183.1 Protein Homology CDS 74627 76267 . + 0 ID=cds-WP_000187530.1;Parent=gene-AD08_RS02860;Dbxref=Genbank:WP_000187530.1;Name=WP_000187530.1;gbkey=CDS;gene=ubiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312792.1;locus_tag=AD08_RS02860;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187530.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 76346 76615 . + . ID=gene-AD08_RS02855;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=AD08_RS02855;old_locus_tag=AD08_4195 NZ_JHDJ01000183.1 Protein Homology CDS 76346 76615 . + 0 ID=cds-WP_001295260.1;Parent=gene-AD08_RS02855;Dbxref=Genbank:WP_001295260.1;Name=WP_001295260.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312793.1;locus_tag=AD08_RS02855;product=Sec-independent protein translocase subunit TatA;protein_id=WP_001295260.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 76619 77134 . + . ID=gene-AD08_RS02850;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=AD08_RS02850;old_locus_tag=AD08_4196 NZ_JHDJ01000183.1 Protein Homology CDS 76619 77134 . + 0 ID=cds-WP_000459594.1;Parent=gene-AD08_RS02850;Dbxref=Genbank:WP_000459594.1;Name=WP_000459594.1;gbkey=CDS;gene=tatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312794.1;locus_tag=AD08_RS02850;product=Sec-independent protein translocase subunit TatB;protein_id=WP_000459594.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 77137 77913 . + . ID=gene-AD08_RS02845;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=AD08_RS02845;old_locus_tag=AD08_4197 NZ_JHDJ01000183.1 Protein Homology CDS 77137 77913 . + 0 ID=cds-WP_000109943.1;Parent=gene-AD08_RS02845;Dbxref=Genbank:WP_000109943.1;Name=WP_000109943.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312795.1;locus_tag=AD08_RS02845;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000109943.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 77955 78737 . + . ID=gene-AD08_RS02840;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=AD08_RS02840;old_locus_tag=AD08_4198 NZ_JHDJ01000183.1 Protein Homology CDS 77955 78737 . + 0 ID=cds-WP_000459630.1;Parent=gene-AD08_RS02840;Dbxref=Genbank:WP_000459630.1;Name=WP_000459630.1;gbkey=CDS;gene=tatD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026271.1;locus_tag=AD08_RS02840;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_000459630.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 78734 79222 . - . ID=gene-AD08_RS02835;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=AD08_RS02835;old_locus_tag=AD08_4199 NZ_JHDJ01000183.1 Protein Homology CDS 78734 79222 . - 0 ID=cds-WP_001192396.1;Parent=gene-AD08_RS02835;Dbxref=Genbank:WP_001192396.1;Name=WP_001192396.1;gbkey=CDS;gene=rfaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312797.1;locus_tag=AD08_RS02835;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192396.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 79389 80882 . + . ID=gene-AD08_RS02830;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=AD08_RS02830;old_locus_tag=AD08_4200 NZ_JHDJ01000183.1 Protein Homology CDS 79389 80882 . + 0 ID=cds-WP_000339804.1;Parent=gene-AD08_RS02830;Dbxref=Genbank:WP_000339804.1;Name=WP_000339804.1;gbkey=CDS;gene=ubiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418285.1;locus_tag=AD08_RS02830;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339804.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 80928 81629 . + . ID=gene-AD08_RS02825;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=AD08_RS02825;old_locus_tag=AD08_4201 NZ_JHDJ01000183.1 Protein Homology CDS 80928 81629 . + 0 ID=cds-WP_000209826.1;Parent=gene-AD08_RS02825;Dbxref=Genbank:WP_000209826.1;Name=WP_000209826.1;gbkey=CDS;gene=fre;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312799.1;locus_tag=AD08_RS02825;product=NAD(P)H-flavin reductase;protein_id=WP_000209826.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 82010 83173 . - . ID=gene-AD08_RS02820;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=AD08_RS02820;old_locus_tag=AD08_4202 NZ_JHDJ01000183.1 Protein Homology CDS 82010 83173 . - 0 ID=cds-WP_000438725.1;Parent=gene-AD08_RS02820;Dbxref=Genbank:WP_000438725.1;Name=WP_000438725.1;gbkey=CDS;gene=fadA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026272.1;locus_tag=AD08_RS02820;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438725.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 83183 85372 . - . ID=gene-AD08_RS02815;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=AD08_RS02815;old_locus_tag=AD08_4203 NZ_JHDJ01000183.1 Protein Homology CDS 83183 85372 . - 0 ID=cds-WP_000965936.1;Parent=gene-AD08_RS02815;Dbxref=Genbank:WP_000965936.1;Name=WP_000965936.1;gbkey=CDS;gene=fadB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001490315.1;locus_tag=AD08_RS02815;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_000965936.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 85562 86893 . + . ID=gene-AD08_RS02810;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=AD08_RS02810;old_locus_tag=AD08_4204 NZ_JHDJ01000183.1 Protein Homology CDS 85562 86893 . + 0 ID=cds-WP_000444561.1;Parent=gene-AD08_RS02810;Dbxref=Genbank:WP_000444561.1;Name=WP_000444561.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=AD08_RS02810;product=Xaa-Pro dipeptidase;protein_id=WP_000444561.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 86893 87507 . + . ID=gene-AD08_RS02805;Name=AD08_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02805;old_locus_tag=AD08_4205 NZ_JHDJ01000183.1 Protein Homology CDS 86893 87507 . + 0 ID=cds-WP_001308167.1;Parent=gene-AD08_RS02805;Dbxref=Genbank:WP_001308167.1;Name=WP_001308167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418290.4;locus_tag=AD08_RS02805;product=IMPACT family protein;protein_id=WP_001308167.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 87546 88997 . + . ID=gene-AD08_RS02800;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=AD08_RS02800;old_locus_tag=AD08_4206 NZ_JHDJ01000183.1 Protein Homology CDS 87546 88997 . + 0 ID=cds-WP_032219379.1;Parent=gene-AD08_RS02800;Dbxref=Genbank:WP_032219379.1;Name=WP_032219379.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=AD08_RS02800;product=Trk system potassium transporter TrkH;protein_id=WP_032219379.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 89009 89554 . + . ID=gene-AD08_RS02795;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=AD08_RS02795;old_locus_tag=AD08_4207 NZ_JHDJ01000183.1 Protein Homology CDS 89009 89554 . + 0 ID=cds-WP_000853959.1;Parent=gene-AD08_RS02795;Dbxref=Genbank:WP_000853959.1;Name=WP_000853959.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312805.1;locus_tag=AD08_RS02795;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853959.1;transl_table=11 NZ_JHDJ01000183.1 RefSeq gene 89932 90465 . + . ID=gene-AD08_RS02790;Name=AD08_RS02790;end_range=90465,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS02790;old_locus_tag=AD08_4208;partial=true NZ_JHDJ01000183.1 RefSeq rRNA 89932 90465 . + . ID=rna-AD08_RS02790;Parent=gene-AD08_RS02790;end_range=90465,.;gbkey=rRNA;locus_tag=AD08_RS02790;partial=true;product=16S ribosomal RNA NZ_JHDJ01000183.1 RefSeq exon 89932 90465 . + . ID=exon-AD08_RS02790-1;Parent=rna-AD08_RS02790;end_range=90465,.;gbkey=rRNA;locus_tag=AD08_RS02790;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDJ01000184.1 1 2682 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000184.1 RefSeq region 1 2682 . + . ID=NZ_JHDJ01000184.1:1..2682;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000184.1 RefSeq gene 1 1204 . + . ID=gene-AD08_RS0126965;Name=AD08_RS0126965;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS0126965;partial=true;start_range=.,1 NZ_JHDJ01000184.1 RefSeq rRNA 1 1204 . + . ID=rna-AD08_RS0126965;Parent=gene-AD08_RS0126965;gbkey=rRNA;locus_tag=AD08_RS0126965;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDJ01000184.1 RefSeq exon 1 1204 . + . ID=exon-AD08_RS0126965-1;Parent=rna-AD08_RS0126965;gbkey=rRNA;locus_tag=AD08_RS0126965;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JHDJ01000184.1 RefSeq gene 1364 1439 . + . ID=gene-AD08_RS02785;Name=AD08_RS02785;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS02785;old_locus_tag=AD08_4209 NZ_JHDJ01000184.1 tRNAscan-SE tRNA 1364 1439 . + . ID=rna-AD08_RS02785;Parent=gene-AD08_RS02785;anticodon=(pos:1398..1400);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS02785;product=tRNA-Glu NZ_JHDJ01000184.1 tRNAscan-SE exon 1364 1439 . + . ID=exon-AD08_RS02785-1;Parent=rna-AD08_RS02785;anticodon=(pos:1398..1400);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS02785;product=tRNA-Glu NZ_JHDJ01000184.1 RefSeq gene 1615 2682 . + . ID=gene-AD08_RS02780;Name=AD08_RS02780;end_range=2682,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS02780;old_locus_tag=AD08_4210;partial=true NZ_JHDJ01000184.1 RefSeq rRNA 1615 2682 . + . ID=rna-AD08_RS02780;Parent=gene-AD08_RS02780;end_range=2682,.;gbkey=rRNA;locus_tag=AD08_RS02780;partial=true;product=23S ribosomal RNA NZ_JHDJ01000184.1 RefSeq exon 1615 2682 . + . ID=exon-AD08_RS02780-1;Parent=rna-AD08_RS02780;end_range=2682,.;gbkey=rRNA;locus_tag=AD08_RS02780;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JHDJ01000185.1 1 5845 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000185.1 RefSeq region 1 5845 . + . ID=NZ_JHDJ01000185.1:1..5845;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000185.1 RefSeq gene 1 1023 . + . ID=gene-AD08_RS0126970;Name=AD08_RS0126970;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS0126970;partial=true;start_range=.,1 NZ_JHDJ01000185.1 RefSeq rRNA 1 1023 . + . ID=rna-AD08_RS0126970;Parent=gene-AD08_RS0126970;gbkey=rRNA;locus_tag=AD08_RS0126970;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDJ01000185.1 RefSeq exon 1 1023 . + . ID=exon-AD08_RS0126970-1;Parent=rna-AD08_RS0126970;gbkey=rRNA;locus_tag=AD08_RS0126970;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDJ01000185.1 RefSeq gene 1101 1216 . + . ID=gene-AD08_RS02775;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD08_RS02775;old_locus_tag=AD08_4212 NZ_JHDJ01000185.1 cmsearch rRNA 1101 1216 . + . ID=rna-AD08_RS02775;Parent=gene-AD08_RS02775;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS02775;product=5S ribosomal RNA NZ_JHDJ01000185.1 cmsearch exon 1101 1216 . + . ID=exon-AD08_RS02775-1;Parent=rna-AD08_RS02775;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS02775;product=5S ribosomal RNA NZ_JHDJ01000185.1 RefSeq gene 1519 2547 . + . ID=gene-AD08_RS02770;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AD08_RS02770;old_locus_tag=AD08_4213 NZ_JHDJ01000185.1 Protein Homology CDS 1519 2547 . + 0 ID=cds-WP_001016699.1;Parent=gene-AD08_RS02770;Dbxref=Genbank:WP_001016699.1;Name=WP_001016699.1;gbkey=CDS;gene=murB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418403.1;locus_tag=AD08_RS02770;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_001016699.1;transl_table=11 NZ_JHDJ01000185.1 RefSeq gene 2544 3509 . + . ID=gene-AD08_RS02765;Name=AD08_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02765;old_locus_tag=AD08_4214 NZ_JHDJ01000185.1 Protein Homology CDS 2544 3509 . + 0 ID=cds-WP_000654630.1;Parent=gene-AD08_RS02765;Dbxref=Genbank:WP_000654630.1;Name=WP_000654630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418404.1;locus_tag=AD08_RS02765;product=bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor;protein_id=WP_000654630.1;transl_table=11 NZ_JHDJ01000185.1 RefSeq gene 3538 4488 . - . ID=gene-AD08_RS02760;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;gene_synonym=panK;locus_tag=AD08_RS02760;old_locus_tag=AD08_4216 NZ_JHDJ01000185.1 Protein Homology CDS 3538 4488 . - 0 ID=cds-WP_000023081.1;Parent=gene-AD08_RS02760;Dbxref=Genbank:WP_000023081.1;Name=WP_000023081.1;gbkey=CDS;gene=coaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418405.1;locus_tag=AD08_RS02760;product=type I pantothenate kinase;protein_id=WP_000023081.1;transl_table=11 NZ_JHDJ01000185.1 RefSeq gene 4850 4925 . + . ID=gene-AD08_RS02755;Name=AD08_RS02755;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS02755;old_locus_tag=AD08_4218 NZ_JHDJ01000185.1 tRNAscan-SE tRNA 4850 4925 . + . ID=rna-AD08_RS02755;Parent=gene-AD08_RS02755;anticodon=(pos:4883..4885);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS02755;product=tRNA-Thr NZ_JHDJ01000185.1 tRNAscan-SE exon 4850 4925 . + . ID=exon-AD08_RS02755-1;Parent=rna-AD08_RS02755;anticodon=(pos:4883..4885);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS02755;product=tRNA-Thr NZ_JHDJ01000185.1 RefSeq gene 4934 5018 . + . ID=gene-AD08_RS02750;Name=AD08_RS02750;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS02750;old_locus_tag=AD08_4219 NZ_JHDJ01000185.1 tRNAscan-SE tRNA 4934 5018 . + . ID=rna-AD08_RS02750;Parent=gene-AD08_RS02750;anticodon=(pos:4968..4970);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS02750;product=tRNA-Tyr NZ_JHDJ01000185.1 tRNAscan-SE exon 4934 5018 . + . ID=exon-AD08_RS02750-1;Parent=rna-AD08_RS02750;anticodon=(pos:4968..4970);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS02750;product=tRNA-Tyr NZ_JHDJ01000185.1 RefSeq gene 5135 5209 . + . ID=gene-AD08_RS02745;Name=AD08_RS02745;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS02745;old_locus_tag=AD08_4220 NZ_JHDJ01000185.1 tRNAscan-SE tRNA 5135 5209 . + . ID=rna-AD08_RS02745;Parent=gene-AD08_RS02745;anticodon=(pos:5168..5170);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS02745;product=tRNA-Gly NZ_JHDJ01000185.1 tRNAscan-SE exon 5135 5209 . + . ID=exon-AD08_RS02745-1;Parent=rna-AD08_RS02745;anticodon=(pos:5168..5170);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS02745;product=tRNA-Gly NZ_JHDJ01000185.1 RefSeq gene 5216 5291 . + . ID=gene-AD08_RS02740;Name=AD08_RS02740;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS02740;old_locus_tag=AD08_4221 NZ_JHDJ01000185.1 tRNAscan-SE tRNA 5216 5291 . + . ID=rna-AD08_RS02740;Parent=gene-AD08_RS02740;anticodon=(pos:5249..5251);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS02740;product=tRNA-Thr NZ_JHDJ01000185.1 tRNAscan-SE exon 5216 5291 . + . ID=exon-AD08_RS02740-1;Parent=rna-AD08_RS02740;anticodon=(pos:5249..5251);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS02740;product=tRNA-Thr NZ_JHDJ01000185.1 RefSeq gene 5406 5845 . + . ID=gene-AD08_RS02735;Name=AD08_RS02735;end_range=5845,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02735;old_locus_tag=AD08_4222;partial=true NZ_JHDJ01000185.1 Protein Homology CDS 5406 5845 . + 0 ID=cds-WP_001674038.1;Parent=gene-AD08_RS02735;Dbxref=Genbank:WP_001674038.1;Name=WP_001674038.1;end_range=5845,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AD08_RS02735;partial=true;product=GTP-binding protein;protein_id=WP_001674038.1;transl_table=11 ##sequence-region NZ_JHDJ01000186.1 1 69084 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000186.1 RefSeq region 1 69084 . + . ID=NZ_JHDJ01000186.1:1..69084;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000186.1 RefSeq gene 1 1023 . + . ID=gene-AD08_RS0126980;Name=AD08_RS0126980;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS0126980;partial=true;start_range=.,1 NZ_JHDJ01000186.1 RefSeq rRNA 1 1023 . + . ID=rna-AD08_RS0126980;Parent=gene-AD08_RS0126980;gbkey=rRNA;locus_tag=AD08_RS0126980;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDJ01000186.1 RefSeq exon 1 1023 . + . ID=exon-AD08_RS0126980-1;Parent=rna-AD08_RS0126980;gbkey=rRNA;locus_tag=AD08_RS0126980;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDJ01000186.1 RefSeq gene 1101 1216 . + . ID=gene-AD08_RS02730;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD08_RS02730;old_locus_tag=AD08_4224 NZ_JHDJ01000186.1 cmsearch rRNA 1101 1216 . + . ID=rna-AD08_RS02730;Parent=gene-AD08_RS02730;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS02730;product=5S ribosomal RNA NZ_JHDJ01000186.1 cmsearch exon 1101 1216 . + . ID=exon-AD08_RS02730-1;Parent=rna-AD08_RS02730;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS02730;product=5S ribosomal RNA NZ_JHDJ01000186.1 RefSeq gene 1488 2015 . - . ID=gene-AD08_RS02725;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=AD08_RS02725;old_locus_tag=AD08_4225 NZ_JHDJ01000186.1 Protein Homology CDS 1488 2015 . - 0 ID=cds-WP_000907622.1;Parent=gene-AD08_RS02725;Dbxref=Genbank:WP_000907622.1;Name=WP_000907622.1;gbkey=CDS;gene=mobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418293.2;locus_tag=AD08_RS02725;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_000907622.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 1997 2581 . - . ID=gene-AD08_RS02720;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=AD08_RS02720;old_locus_tag=AD08_4226 NZ_JHDJ01000186.1 Protein Homology CDS 1997 2581 . - 0 ID=cds-WP_001052181.1;Parent=gene-AD08_RS02720;Dbxref=Genbank:WP_001052181.1;Name=WP_001052181.1;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418294.1;locus_tag=AD08_RS02720;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001052181.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 2651 2920 . + . ID=gene-AD08_RS02715;Name=AD08_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02715;old_locus_tag=AD08_4227 NZ_JHDJ01000186.1 Protein Homology CDS 2651 2920 . + 0 ID=cds-WP_001295263.1;Parent=gene-AD08_RS02715;Dbxref=Genbank:WP_001295263.1;Name=WP_001295263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=AD08_RS02715;product=YihD family protein;protein_id=WP_001295263.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 2997 3983 . + . ID=gene-AD08_RS02710;Name=srkA;gbkey=Gene;gene=srkA;gene_biotype=protein_coding;locus_tag=AD08_RS02710;old_locus_tag=AD08_4228 NZ_JHDJ01000186.1 Protein Homology CDS 2997 3983 . + 0 ID=cds-WP_001065497.1;Parent=gene-AD08_RS02710;Dbxref=Genbank:WP_001065497.1;Name=WP_001065497.1;gbkey=CDS;gene=srkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418296.1;locus_tag=AD08_RS02710;product=stress response kinase SrkA;protein_id=WP_001065497.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 4000 4626 . + . ID=gene-AD08_RS02705;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=AD08_RS02705;old_locus_tag=AD08_4229 NZ_JHDJ01000186.1 Protein Homology CDS 4000 4626 . + 0 ID=cds-WP_000725337.1;Parent=gene-AD08_RS02705;Dbxref=Genbank:WP_000725337.1;Name=WP_000725337.1;gbkey=CDS;gene=dsbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312810.1;locus_tag=AD08_RS02705;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725337.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 4781 6211 . + . ID=gene-AD08_RS02700;Name=AD08_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02700;old_locus_tag=AD08_4231 NZ_JHDJ01000186.1 Protein Homology CDS 4781 6211 . + 0 ID=cds-WP_001340415.1;Parent=gene-AD08_RS02700;Dbxref=Genbank:WP_001340415.1;Name=WP_001340415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418298.4;locus_tag=AD08_RS02700;product=YdgA family protein;protein_id=WP_001340415.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 6252 7184 . - . ID=gene-AD08_RS02695;Name=AD08_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02695;old_locus_tag=AD08_4232 NZ_JHDJ01000186.1 Protein Homology CDS 6252 7184 . - 0 ID=cds-WP_001311257.1;Parent=gene-AD08_RS02695;Dbxref=Genbank:WP_001311257.1;Name=WP_001311257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418299.1;locus_tag=AD08_RS02695;product=acyltransferase;protein_id=WP_001311257.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 7304 7546 . - . ID=gene-AD08_RS0126985;Name=AD08_RS0126985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0126985 NZ_JHDJ01000186.1 Protein Homology CDS 7304 7546 . - 0 ID=cds-WP_000115994.1;Parent=gene-AD08_RS0126985;Dbxref=Genbank:WP_000115994.1;Name=WP_000115994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439293.1;locus_tag=AD08_RS0126985;product=hypothetical protein;protein_id=WP_000115994.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 7548 10334 . + . ID=gene-AD08_RS02690;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=AD08_RS02690;old_locus_tag=AD08_4234 NZ_JHDJ01000186.1 Protein Homology CDS 7548 10334 . + 0 ID=cds-WP_000250006.1;Parent=gene-AD08_RS02690;Dbxref=Genbank:WP_000250006.1;Name=WP_000250006.1;gbkey=CDS;gene=polA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418300.1;locus_tag=AD08_RS02690;product=DNA polymerase I;protein_id=WP_000250006.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 10715 11347 . - . ID=gene-AD08_RS02685;Name=AD08_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02685;old_locus_tag=AD08_4236 NZ_JHDJ01000186.1 Protein Homology CDS 10715 11347 . - 0 ID=cds-WP_000183349.1;Parent=gene-AD08_RS02685;Dbxref=Genbank:WP_000183349.1;Name=WP_000183349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418301.3;locus_tag=AD08_RS02685;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=WP_000183349.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 11929 12438 . + . ID=gene-AD08_RS02680;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=AD08_RS02680;old_locus_tag=AD08_4237 NZ_JHDJ01000186.1 Protein Homology CDS 11929 12438 . + 0 ID=cds-WP_004019309.1;Parent=gene-AD08_RS02680;Dbxref=Genbank:WP_004019309.1;Name=WP_004019309.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418302.1;locus_tag=AD08_RS02680;product=Der GTPase-activating protein YihI;protein_id=WP_004019309.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 12627 14000 . + . ID=gene-AD08_RS02675;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=AD08_RS02675;old_locus_tag=AD08_4239 NZ_JHDJ01000186.1 Protein Homology CDS 12627 14000 . + 0 ID=cds-WP_032219384.1;Parent=gene-AD08_RS02675;Dbxref=Genbank:WP_032219384.1;Name=WP_032219384.1;gbkey=CDS;gene=hemN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121847.1;locus_tag=AD08_RS02675;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_032219384.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 14229 14339 . - . ID=gene-AD08_RS0126990;Name=yshB;gbkey=Gene;gene=yshB;gene_biotype=protein_coding;locus_tag=AD08_RS0126990 NZ_JHDJ01000186.1 Protein Homology CDS 14229 14339 . - 0 ID=cds-WP_000893994.1;Parent=gene-AD08_RS0126990;Dbxref=Genbank:WP_000893994.1;Name=WP_000893994.1;gbkey=CDS;gene=yshB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=AD08_RS0126990;product=YshB family small membrane protein;protein_id=WP_000893994.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 14451 15860 . - . ID=gene-AD08_RS02670;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=AD08_RS02670;old_locus_tag=AD08_4241 NZ_JHDJ01000186.1 Protein Homology CDS 14451 15860 . - 0 ID=cds-WP_001188777.1;Parent=gene-AD08_RS02670;Dbxref=Genbank:WP_001188777.1;Name=WP_001188777.1;gbkey=CDS;gene=glnG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=AD08_RS02670;product=nitrogen regulation protein NR(I);protein_id=WP_001188777.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 15872 16921 . - . ID=gene-AD08_RS02665;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=AD08_RS02665;old_locus_tag=AD08_4242 NZ_JHDJ01000186.1 Protein Homology CDS 15872 16921 . - 0 ID=cds-WP_000190577.1;Parent=gene-AD08_RS02665;Dbxref=Genbank:WP_000190577.1;Name=WP_000190577.1;gbkey=CDS;gene=glnL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312818.1;locus_tag=AD08_RS02665;product=nitrogen regulation protein NR(II);protein_id=WP_000190577.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 17207 18616 . - . ID=gene-AD08_RS02660;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=AD08_RS02660;old_locus_tag=AD08_4243 NZ_JHDJ01000186.1 Protein Homology CDS 17207 18616 . - 0 ID=cds-WP_001271717.1;Parent=gene-AD08_RS02660;Dbxref=Genbank:WP_001271717.1;Name=WP_001271717.1;gbkey=CDS;gene=glnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=AD08_RS02660;product=glutamate--ammonia ligase;protein_id=WP_001271717.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 18989 20812 . + . ID=gene-AD08_RS02655;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=AD08_RS02655;old_locus_tag=AD08_4244 NZ_JHDJ01000186.1 Protein Homology CDS 18989 20812 . + 0 ID=cds-WP_000570668.1;Parent=gene-AD08_RS02655;Dbxref=Genbank:WP_000570668.1;Name=WP_000570668.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312820.1;locus_tag=AD08_RS02655;product=ribosome-dependent GTPase TypA;protein_id=WP_000570668.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 21029 21739 . + . ID=gene-AD08_RS02650;Name=AD08_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02650;old_locus_tag=AD08_4245 NZ_JHDJ01000186.1 Protein Homology CDS 21029 21739 . + 0 ID=cds-WP_000829798.1;Parent=gene-AD08_RS02650;Dbxref=Genbank:WP_000829798.1;Name=WP_000829798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312821.1;locus_tag=AD08_RS02650;product=UTRA domain-containing protein;protein_id=WP_000829798.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 21747 22727 . + . ID=gene-AD08_RS02645;Name=AD08_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02645;old_locus_tag=AD08_4246 NZ_JHDJ01000186.1 Protein Homology CDS 21747 22727 . + 0 ID=cds-WP_000256396.1;Parent=gene-AD08_RS02645;Dbxref=Genbank:WP_000256396.1;Name=WP_000256396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418309.1;locus_tag=AD08_RS02645;product=TIM barrel protein;protein_id=WP_000256396.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 22829 24094 . + . ID=gene-AD08_RS02640;Name=AD08_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02640;old_locus_tag=AD08_4247 NZ_JHDJ01000186.1 Protein Homology CDS 22829 24094 . + 0 ID=cds-WP_000956313.1;Parent=gene-AD08_RS02640;Dbxref=Genbank:WP_000956313.1;Name=WP_000956313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418310.1;locus_tag=AD08_RS02640;product=MFS transporter;protein_id=WP_000956313.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 24185 24877 . - . ID=gene-AD08_RS02635;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=AD08_RS02635;old_locus_tag=AD08_4248 NZ_JHDJ01000186.1 Protein Homology CDS 24185 24877 . - 0 ID=cds-WP_032219386.1;Parent=gene-AD08_RS02635;Dbxref=Genbank:WP_032219386.1;Name=WP_032219386.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418311.1;locus_tag=AD08_RS02635;product=porin OmpL;protein_id=WP_032219386.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 24945 26348 . - . ID=gene-AD08_RS02630;Name=AD08_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02630;old_locus_tag=AD08_4249 NZ_JHDJ01000186.1 Protein Homology CDS 24945 26348 . - 0 ID=cds-WP_001295267.1;Parent=gene-AD08_RS02630;Dbxref=Genbank:WP_001295267.1;Name=WP_001295267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026275.1;locus_tag=AD08_RS02630;product=MFS transporter;protein_id=WP_001295267.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 26391 27776 . - . ID=gene-AD08_RS02625;Name=AD08_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02625;old_locus_tag=AD08_4250 NZ_JHDJ01000186.1 Protein Homology CDS 26391 27776 . - 0 ID=cds-WP_000018380.1;Parent=gene-AD08_RS02625;Dbxref=Genbank:WP_000018380.1;Name=WP_000018380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418313.4;locus_tag=AD08_RS02625;product=MFS transporter;protein_id=WP_000018380.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 27822 29858 . - . ID=gene-AD08_RS02620;Name=yihQ;gbkey=Gene;gene=yihQ;gene_biotype=protein_coding;locus_tag=AD08_RS02620;old_locus_tag=AD08_4251 NZ_JHDJ01000186.1 Protein Homology CDS 27822 29858 . - 0 ID=cds-WP_000380843.1;Parent=gene-AD08_RS02620;Dbxref=Genbank:WP_000380843.1;Name=WP_000380843.1;gbkey=CDS;gene=yihQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418314.1;locus_tag=AD08_RS02620;product=sulfoquinovosidase;protein_id=WP_000380843.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 30057 30983 . - . ID=gene-AD08_RS02615;Name=AD08_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02615;old_locus_tag=AD08_4252 NZ_JHDJ01000186.1 Protein Homology CDS 30057 30983 . - 0 ID=cds-WP_000052655.1;Parent=gene-AD08_RS02615;Dbxref=Genbank:WP_000052655.1;Name=WP_000052655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418315.3;locus_tag=AD08_RS02615;product=aldose-1-epimerase;protein_id=WP_000052655.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 31097 32338 . - . ID=gene-AD08_RS02610;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=AD08_RS02610;old_locus_tag=AD08_4253 NZ_JHDJ01000186.1 Protein Homology CDS 31097 32338 . - 0 ID=cds-WP_000870916.1;Parent=gene-AD08_RS02610;Dbxref=Genbank:WP_000870916.1;Name=WP_000870916.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418316.4;locus_tag=AD08_RS02610;product=sulfoquinovose isomerase;protein_id=WP_000870916.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 32355 33233 . - . ID=gene-AD08_RS02605;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=AD08_RS02605;old_locus_tag=AD08_4254 NZ_JHDJ01000186.1 Protein Homology CDS 32355 33233 . - 0 ID=cds-WP_001046453.1;Parent=gene-AD08_RS02605;Dbxref=Genbank:WP_001046453.1;Name=WP_001046453.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418317.1;locus_tag=AD08_RS02605;product=sulfofructosephosphate aldolase;protein_id=WP_001046453.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 33257 34153 . - . ID=gene-AD08_RS02600;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=AD08_RS02600;old_locus_tag=AD08_4255 NZ_JHDJ01000186.1 Protein Homology CDS 33257 34153 . - 0 ID=cds-WP_000718893.1;Parent=gene-AD08_RS02600;Dbxref=Genbank:WP_000718893.1;Name=WP_000718893.1;gbkey=CDS;gene=yihU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418318.1;locus_tag=AD08_RS02600;product=sulfolactaldehyde 3-reductase;protein_id=WP_000718893.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 34321 35217 . + . ID=gene-AD08_RS02595;Name=yihV;gbkey=Gene;gene=yihV;gene_biotype=protein_coding;locus_tag=AD08_RS02595;old_locus_tag=AD08_4256 NZ_JHDJ01000186.1 Protein Homology CDS 34321 35217 . + 0 ID=cds-WP_000621656.1;Parent=gene-AD08_RS02595;Dbxref=Genbank:WP_000621656.1;Name=WP_000621656.1;gbkey=CDS;gene=yihV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418319.2;locus_tag=AD08_RS02595;product=sulfofructose kinase;protein_id=WP_000621656.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 35251 36036 . + . ID=gene-AD08_RS02590;Name=AD08_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02590;old_locus_tag=AD08_4257 NZ_JHDJ01000186.1 Protein Homology CDS 35251 36036 . + 0 ID=cds-WP_032219387.1;Parent=gene-AD08_RS02590;Dbxref=Genbank:WP_032219387.1;Name=WP_032219387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418320.2;locus_tag=AD08_RS02590;product=DeoR/GlpR transcriptional regulator;protein_id=WP_032219387.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 36135 36734 . + . ID=gene-AD08_RS02585;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=AD08_RS02585;old_locus_tag=AD08_4258 NZ_JHDJ01000186.1 Protein Homology CDS 36135 36734 . + 0 ID=cds-WP_001464827.1;Parent=gene-AD08_RS02585;Dbxref=Genbank:WP_001464827.1;Name=WP_001464827.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709685.2;locus_tag=AD08_RS02585;product=glucose-1-phosphatase;protein_id=WP_001464827.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 36728 37600 . + . ID=gene-AD08_RS02580;Name=AD08_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02580;old_locus_tag=AD08_4259 NZ_JHDJ01000186.1 Protein Homology CDS 36728 37600 . + 0 ID=cds-WP_000920762.1;Parent=gene-AD08_RS02580;Dbxref=Genbank:WP_000920762.1;Name=WP_000920762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312836.1;locus_tag=AD08_RS02580;product=virulence factor BrkB family protein;protein_id=WP_000920762.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 37597 38034 . + . ID=gene-AD08_RS02575;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=AD08_RS02575;old_locus_tag=AD08_4260 NZ_JHDJ01000186.1 Protein Homology CDS 37597 38034 . + 0 ID=cds-WP_000560983.1;Parent=gene-AD08_RS02575;Dbxref=Genbank:WP_000560983.1;Name=WP_000560983.1;gbkey=CDS;gene=dtd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=AD08_RS02575;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=WP_000560983.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 38079 39020 . + . ID=gene-AD08_RS02570;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=AD08_RS02570;old_locus_tag=AD08_4261 NZ_JHDJ01000186.1 Protein Homology CDS 38079 39020 . + 0 ID=cds-WP_001297068.1;Parent=gene-AD08_RS02570;Dbxref=Genbank:WP_001297068.1;Name=WP_001297068.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=AD08_RS02570;product=fatty acid biosynthesis protein FabY;protein_id=WP_001297068.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 39873 40091 . + . ID=gene-AD08_RS02565;Name=AD08_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02565;old_locus_tag=AD08_4262 NZ_JHDJ01000186.1 Protein Homology CDS 39873 40091 . + 0 ID=cds-WP_001295676.1;Parent=gene-AD08_RS02565;Dbxref=Genbank:WP_001295676.1;Name=WP_001295676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312842.3;locus_tag=AD08_RS02565;product=CopG family transcriptional regulator;protein_id=WP_001295676.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 40309 40551 . + . ID=gene-AD08_RS02560;Name=AD08_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02560;old_locus_tag=AD08_4263 NZ_JHDJ01000186.1 Protein Homology CDS 40309 40551 . + 0 ID=cds-WP_001086388.1;Parent=gene-AD08_RS02560;Dbxref=Genbank:WP_001086388.1;Name=WP_001086388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709694.2;locus_tag=AD08_RS02560;product=hypothetical protein;protein_id=WP_001086388.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 40881 41810 . - . ID=gene-AD08_RS02555;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=AD08_RS02555;old_locus_tag=AD08_4264 NZ_JHDJ01000186.1 Protein Homology CDS 40881 41810 . - 0 ID=cds-WP_000027703.1;Parent=gene-AD08_RS02555;Dbxref=Genbank:WP_000027703.1;Name=WP_000027703.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=AD08_RS02555;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027703.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 41807 42442 . - . ID=gene-AD08_RS02550;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=AD08_RS02550;old_locus_tag=AD08_4265 NZ_JHDJ01000186.1 Protein Homology CDS 41807 42442 . - 0 ID=cds-WP_000829013.1;Parent=gene-AD08_RS02550;Dbxref=Genbank:WP_000829013.1;Name=WP_000829013.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312845.1;locus_tag=AD08_RS02550;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829013.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 42439 43341 . - . ID=gene-AD08_RS02545;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=AD08_RS02545;old_locus_tag=AD08_4266 NZ_JHDJ01000186.1 Protein Homology CDS 42439 43341 . - 0 ID=cds-WP_021548410.1;Parent=gene-AD08_RS02545;Dbxref=Genbank:WP_021548410.1;Name=WP_021548410.1;gbkey=CDS;gene=fdxH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418329.1;locus_tag=AD08_RS02545;product=formate dehydrogenase O subunit beta;protein_id=WP_021548410.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 43354 46404 . - . ID=gene-AD08_RS02540;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AD08_RS02540;old_locus_tag=AD08_4267 NZ_JHDJ01000186.1 Protein Homology CDS 43354 46404 . - 0 ID=cds-WP_010723259.1;Parent=gene-AD08_RS02540;Dbxref=Genbank:WP_010723259.1;Name=WP_010723259.1;gbkey=CDS;gene=fdnG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418330.1;locus_tag=AD08_RS02540;product=formate dehydrogenase-N subunit alpha;protein_id=WP_010723259.1;transl_except=(pos:complement(45817..45819)%2Caa:Sec);transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 46598 47431 . + . ID=gene-AD08_RS02530;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=AD08_RS02530;old_locus_tag=AD08_4270 NZ_JHDJ01000186.1 Protein Homology CDS 46598 47431 . + 0 ID=cds-WP_000753617.1;Parent=gene-AD08_RS02530;Dbxref=Genbank:WP_000753617.1;Name=WP_000753617.1;gbkey=CDS;gene=fdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418331.1;locus_tag=AD08_RS02530;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_000753617.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 47584 48639 . + . ID=gene-AD08_RS02525;Name=AD08_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02525;old_locus_tag=AD08_4271 NZ_JHDJ01000186.1 Protein Homology CDS 47584 48639 . + 0 ID=cds-WP_032219390.1;Parent=gene-AD08_RS02525;Dbxref=Genbank:WP_032219390.1;Name=WP_032219390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418332.1;locus_tag=AD08_RS02525;product=YiiG family protein;protein_id=WP_032219390.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 48689 50437 . - . ID=gene-AD08_RS02520;Name=AD08_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02520;old_locus_tag=AD08_4272 NZ_JHDJ01000186.1 Protein Homology CDS 48689 50437 . - 0 ID=cds-WP_032219391.1;Parent=gene-AD08_RS02520;Dbxref=Genbank:WP_032219391.1;Name=WP_032219391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418333.1;locus_tag=AD08_RS02520;product=PTS transporter subunit EIIA;protein_id=WP_032219391.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 50437 51507 . - . ID=gene-AD08_RS02515;Name=AD08_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02515;old_locus_tag=AD08_4273 NZ_JHDJ01000186.1 Protein Homology CDS 50437 51507 . - 0 ID=cds-WP_001019484.1;Parent=gene-AD08_RS02515;Dbxref=Genbank:WP_001019484.1;Name=WP_001019484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418334.1;locus_tag=AD08_RS02515;product=aminopeptidase;protein_id=WP_001019484.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 51497 52948 . - . ID=gene-AD08_RS02510;Name=AD08_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02510;old_locus_tag=AD08_4274 NZ_JHDJ01000186.1 Protein Homology CDS 51497 52948 . - 0 ID=cds-WP_032219393.1;Parent=gene-AD08_RS02510;Dbxref=Genbank:WP_032219393.1;Name=WP_032219393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418335.4;locus_tag=AD08_RS02510;product=PTS fructose-like transporter subunit IIBC;protein_id=WP_032219393.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 52959 53405 . - . ID=gene-AD08_RS02505;Name=AD08_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02505;old_locus_tag=AD08_4275 NZ_JHDJ01000186.1 Protein Homology CDS 52959 53405 . - 0 ID=cds-WP_000729595.1;Parent=gene-AD08_RS02505;Dbxref=Genbank:WP_000729595.1;Name=WP_000729595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418336.1;locus_tag=AD08_RS02505;product=PTS fructose transporter subunit IIA;protein_id=WP_000729595.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 53706 54020 . - . ID=gene-AD08_RS02500;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=AD08_RS02500;old_locus_tag=AD08_4277 NZ_JHDJ01000186.1 Protein Homology CDS 53706 54020 . - 0 ID=cds-WP_001414389.1;Parent=gene-AD08_RS02500;Dbxref=Genbank:WP_001414389.1;Name=WP_001414389.1;gbkey=CDS;gene=rhaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418337.1;locus_tag=AD08_RS02500;product=L-rhamnose mutarotase;protein_id=WP_001414389.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 54030 54854 . - . ID=gene-AD08_RS02495;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=AD08_RS02495;old_locus_tag=AD08_4278 NZ_JHDJ01000186.1 Protein Homology CDS 54030 54854 . - 0 ID=cds-WP_001179745.1;Parent=gene-AD08_RS02495;Dbxref=Genbank:WP_001179745.1;Name=WP_001179745.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418338.1;locus_tag=AD08_RS02495;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179745.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 55305 56564 . - . ID=gene-AD08_RS02490;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=AD08_RS02490;old_locus_tag=AD08_4279 NZ_JHDJ01000186.1 Protein Homology CDS 55305 56564 . - 0 ID=cds-WP_001311268.1;Parent=gene-AD08_RS02490;Dbxref=Genbank:WP_001311268.1;Name=WP_001311268.1;gbkey=CDS;gene=rhaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026276.1;locus_tag=AD08_RS02490;product=L-rhamnose isomerase;protein_id=WP_001311268.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 56561 58030 . - . ID=gene-AD08_RS02485;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=AD08_RS02485;old_locus_tag=AD08_4280 NZ_JHDJ01000186.1 Protein Homology CDS 56561 58030 . - 0 ID=cds-WP_000144059.1;Parent=gene-AD08_RS02485;Dbxref=Genbank:WP_000144059.1;Name=WP_000144059.1;gbkey=CDS;gene=rhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418340.1;locus_tag=AD08_RS02485;product=rhamnulokinase;protein_id=WP_000144059.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 58318 59154 . + . ID=gene-AD08_RS02475;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=AD08_RS02475;old_locus_tag=AD08_4282 NZ_JHDJ01000186.1 Protein Homology CDS 58318 59154 . + 0 ID=cds-WP_000217137.1;Parent=gene-AD08_RS02475;Dbxref=Genbank:WP_000217137.1;Name=WP_000217137.1;gbkey=CDS;gene=rhaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418341.1;locus_tag=AD08_RS02475;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217137.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 59138 60076 . + . ID=gene-AD08_RS02470;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=AD08_RS02470;old_locus_tag=AD08_4283 NZ_JHDJ01000186.1 Protein Homology CDS 59138 60076 . + 0 ID=cds-WP_071608274.1;Parent=gene-AD08_RS02470;Dbxref=Genbank:WP_071608274.1;Name=WP_071608274.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709710.2;locus_tag=AD08_RS02470;product=HTH-type transcriptional activator RhaR;protein_id=WP_071608274.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq pseudogene 60073 61108 . - . ID=gene-AD08_RS0127005;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=pseudogene;locus_tag=AD08_RS0127005;pseudo=true NZ_JHDJ01000186.1 Protein Homology CDS 60073 61108 . - 0 ID=cds-AD08_RS0127005;Parent=gene-AD08_RS0127005;Note=frameshifted;gbkey=CDS;gene=rhaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418343.1;locus_tag=AD08_RS0127005;product=L-rhamnose/proton symporter RhaT;pseudo=true;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 61393 62013 . + . ID=gene-AD08_RS02465;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=AD08_RS02465;old_locus_tag=AD08_4286 NZ_JHDJ01000186.1 Protein Homology CDS 61393 62013 . + 0 ID=cds-WP_001431227.1;Parent=gene-AD08_RS02465;Dbxref=Genbank:WP_001431227.1;Name=WP_001431227.1;gbkey=CDS;gene=sodA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=AD08_RS02465;product=superoxide dismutase [Mn];protein_id=WP_001431227.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 62273 63256 . + . ID=gene-AD08_RS02455;Name=kdgT;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;locus_tag=AD08_RS02455;old_locus_tag=AD08_4288 NZ_JHDJ01000186.1 Protein Homology CDS 62273 63256 . + 0 ID=cds-WP_001166063.1;Parent=gene-AD08_RS02455;Dbxref=Genbank:WP_001166063.1;Name=WP_001166063.1;gbkey=CDS;gene=kdgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709713.2;locus_tag=AD08_RS02455;product=2-keto-3-deoxygluconate transporter;protein_id=WP_001166063.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 63405 64079 . + . ID=gene-AD08_RS02450;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=AD08_RS02450;old_locus_tag=AD08_4289 NZ_JHDJ01000186.1 Protein Homology CDS 63405 64079 . + 0 ID=cds-WP_001270260.1;Parent=gene-AD08_RS02450;Dbxref=Genbank:WP_001270260.1;Name=WP_001270260.1;gbkey=CDS;gene=yiiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418346.2;locus_tag=AD08_RS02450;product=6-N-hydroxylaminopurine resistance protein;protein_id=WP_001270260.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 64185 65558 . - . ID=gene-AD08_RS02445;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=AD08_RS02445;old_locus_tag=AD08_4290 NZ_JHDJ01000186.1 Protein Homology CDS 64185 65558 . - 0 ID=cds-WP_032219395.1;Parent=gene-AD08_RS02445;Dbxref=Genbank:WP_032219395.1;Name=WP_032219395.1;gbkey=CDS;gene=cpxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312864.1;locus_tag=AD08_RS02445;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_032219395.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 65555 66253 . - . ID=gene-AD08_RS02440;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=AD08_RS02440;old_locus_tag=AD08_4291 NZ_JHDJ01000186.1 Protein Homology CDS 65555 66253 . - 0 ID=cds-WP_001033722.1;Parent=gene-AD08_RS02440;Dbxref=Genbank:WP_001033722.1;Name=WP_001033722.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=AD08_RS02440;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033722.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 66403 66903 . + . ID=gene-AD08_RS02435;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=AD08_RS02435;old_locus_tag=AD08_4292 NZ_JHDJ01000186.1 Protein Homology CDS 66403 66903 . + 0 ID=cds-WP_001223800.1;Parent=gene-AD08_RS02435;Dbxref=Genbank:WP_001223800.1;Name=WP_001223800.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026277.1;locus_tag=AD08_RS02435;product=cell-envelope stress modulator CpxP;protein_id=WP_001223800.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 67089 68069 . - . ID=gene-AD08_RS02430;Name=AD08_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02430;old_locus_tag=AD08_4293 NZ_JHDJ01000186.1 Protein Homology CDS 67089 68069 . - 0 ID=cds-WP_032219397.1;Parent=gene-AD08_RS02430;Dbxref=Genbank:WP_032219397.1;Name=WP_032219397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985242.1;locus_tag=AD08_RS02430;product=tyrosine-type recombinase/integrase;protein_id=WP_032219397.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 68139 68432 . - . ID=gene-AD08_RS0127010;Name=AD08_RS0127010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0127010 NZ_JHDJ01000186.1 Protein Homology CDS 68139 68432 . - 0 ID=cds-WP_001192857.1;Parent=gene-AD08_RS0127010;Dbxref=Genbank:WP_001192857.1;Name=WP_001192857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192859.1;locus_tag=AD08_RS0127010;product=helix-turn-helix domain-containing protein;protein_id=WP_001192857.1;transl_table=11 NZ_JHDJ01000186.1 RefSeq gene 68736 69084 . - . ID=gene-AD08_RS02425;Name=AD08_RS02425;end_range=69084,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02425;old_locus_tag=AD08_4295;partial=true NZ_JHDJ01000186.1 Protein Homology CDS 68736 69084 . - 1 ID=cds-WP_000708057.1;Parent=gene-AD08_RS02425;Dbxref=Genbank:WP_000708057.1;Name=WP_000708057.1;end_range=69084,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS02425;partial=true;product=IS3 family transposase;protein_id=WP_000708057.1;transl_table=11 ##sequence-region NZ_JHDJ01000187.1 1 62602 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000187.1 RefSeq region 1 62602 . + . ID=NZ_JHDJ01000187.1:1..62602;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000187.1 RefSeq gene 49 1395 . + . ID=gene-AD08_RS02420;Name=AD08_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02420;old_locus_tag=AD08_4296 NZ_JHDJ01000187.1 Protein Homology CDS 49 1395 . + 0 ID=cds-WP_000483767.1-5;Parent=gene-AD08_RS02420;Dbxref=Genbank:WP_000483767.1;Name=WP_000483767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AD08_RS02420;product=IS4-like element IS4 family transposase;protein_id=WP_000483767.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 1633 2535 . + . ID=gene-AD08_RS02415;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=AD08_RS02415;old_locus_tag=AD08_4298 NZ_JHDJ01000187.1 Protein Homology CDS 1633 2535 . + 0 ID=cds-WP_001076742.1;Parent=gene-AD08_RS02415;Dbxref=Genbank:WP_001076742.1;Name=WP_001076742.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;gbkey=CDS;gene=fieF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312867.1;locus_tag=AD08_RS02415;product=CDF family cation-efflux transporter FieF;protein_id=WP_001076742.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 2716 3678 . + . ID=gene-AD08_RS02410;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=AD08_RS02410;old_locus_tag=AD08_4299 NZ_JHDJ01000187.1 Protein Homology CDS 2716 3678 . + 0 ID=cds-WP_000591795.1;Parent=gene-AD08_RS02410;Dbxref=Genbank:WP_000591795.1;Name=WP_000591795.1;gbkey=CDS;gene=pfkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312868.1;locus_tag=AD08_RS02410;product=6-phosphofructokinase;protein_id=WP_000591795.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 3998 4987 . + . ID=gene-AD08_RS02405;Name=AD08_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02405;old_locus_tag=AD08_4300 NZ_JHDJ01000187.1 Protein Homology CDS 3998 4987 . + 0 ID=cds-WP_001045689.1;Parent=gene-AD08_RS02405;Dbxref=Genbank:WP_001045689.1;Name=WP_001045689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=AD08_RS02405;product=sulfate/thiosulfate ABC transporter substrate-binding protein Sbp;protein_id=WP_001045689.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 5094 5849 . + . ID=gene-AD08_RS02400;Name=cdh;gbkey=Gene;gene=cdh;gene_biotype=protein_coding;locus_tag=AD08_RS02400;old_locus_tag=AD08_4301 NZ_JHDJ01000187.1 Protein Homology CDS 5094 5849 . + 0 ID=cds-WP_001326656.1;Parent=gene-AD08_RS02400;Dbxref=Genbank:WP_001326656.1;Name=WP_001326656.1;gbkey=CDS;gene=cdh;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418353.1;locus_tag=AD08_RS02400;product=CDP-diacylglycerol diphosphatase;protein_id=WP_001326656.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 5904 6671 . - . ID=gene-AD08_RS02395;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=AD08_RS02395;old_locus_tag=AD08_4302 NZ_JHDJ01000187.1 Protein Homology CDS 5904 6671 . - 0 ID=cds-WP_001216325.1;Parent=gene-AD08_RS02395;Dbxref=Genbank:WP_001216325.1;Name=WP_001216325.1;gbkey=CDS;gene=tpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312871.1;locus_tag=AD08_RS02395;product=triose-phosphate isomerase;protein_id=WP_001216325.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 6779 7378 . - . ID=gene-AD08_RS02390;Name=AD08_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02390;old_locus_tag=AD08_4303 NZ_JHDJ01000187.1 Protein Homology CDS 6779 7378 . - 0 ID=cds-WP_032219402.1;Parent=gene-AD08_RS02390;Dbxref=Genbank:WP_032219402.1;Name=WP_032219402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312872.1;locus_tag=AD08_RS02390;product=YiiQ family protein;protein_id=WP_032219402.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 7479 7919 . + . ID=gene-AD08_RS02385;Name=AD08_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02385;old_locus_tag=AD08_4304 NZ_JHDJ01000187.1 Protein Homology CDS 7479 7919 . + 0 ID=cds-WP_000155257.1;Parent=gene-AD08_RS02385;Dbxref=Genbank:WP_000155257.1;Name=WP_000155257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312873.1;locus_tag=AD08_RS02385;product=DUF805 domain-containing protein;protein_id=WP_000155257.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 8131 8430 . + . ID=gene-AD08_RS02380;Name=AD08_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02380;old_locus_tag=AD08_4305 NZ_JHDJ01000187.1 Protein Homology CDS 8131 8430 . + 0 ID=cds-WP_000655989.1;Parent=gene-AD08_RS02380;Dbxref=Genbank:WP_000655989.1;Name=WP_000655989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418357.1;locus_tag=AD08_RS02380;product=DUF406 domain-containing protein;protein_id=WP_000655989.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 8457 8885 . + . ID=gene-AD08_RS02375;Name=uspD;gbkey=Gene;gene=uspD;gene_biotype=protein_coding;locus_tag=AD08_RS02375;old_locus_tag=AD08_4306 NZ_JHDJ01000187.1 Protein Homology CDS 8457 8885 . + 0 ID=cds-WP_000323556.1;Parent=gene-AD08_RS02375;Dbxref=Genbank:WP_000323556.1;Name=WP_000323556.1;gbkey=CDS;gene=uspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418358.1;locus_tag=AD08_RS02375;product=universal stress protein UspD;protein_id=WP_000323556.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 8890 9636 . - . ID=gene-AD08_RS02370;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=AD08_RS02370;old_locus_tag=AD08_4307 NZ_JHDJ01000187.1 Protein Homology CDS 8890 9636 . - 0 ID=cds-WP_000796332.1;Parent=gene-AD08_RS02370;Dbxref=Genbank:WP_000796332.1;Name=WP_000796332.1;gbkey=CDS;gene=fpr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742479.1;locus_tag=AD08_RS02370;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796332.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 9733 10743 . - . ID=gene-AD08_RS02365;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AD08_RS02365;old_locus_tag=AD08_4308 NZ_JHDJ01000187.1 Protein Homology CDS 9733 10743 . - 0 ID=cds-WP_001487677.1;Parent=gene-AD08_RS02365;Dbxref=Genbank:WP_001487677.1;Name=WP_001487677.1;gbkey=CDS;gene=glpX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418360.1;locus_tag=AD08_RS02365;product=class II fructose-bisphosphatase;protein_id=WP_001487677.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 10878 12386 . - . ID=gene-AD08_RS02360;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=AD08_RS02360;old_locus_tag=AD08_4309 NZ_JHDJ01000187.1 Protein Homology CDS 10878 12386 . - 0 ID=cds-WP_000136788.1;Parent=gene-AD08_RS02360;Dbxref=Genbank:WP_000136788.1;Name=WP_000136788.1;gbkey=CDS;gene=glpK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312878.1;locus_tag=AD08_RS02360;product=glycerol kinase GlpK;protein_id=WP_000136788.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 12409 13254 . - . ID=gene-AD08_RS02355;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;locus_tag=AD08_RS02355;old_locus_tag=AD08_4310 NZ_JHDJ01000187.1 Protein Homology CDS 12409 13254 . - 0 ID=cds-WP_000084268.1;Parent=gene-AD08_RS02355;Dbxref=Genbank:WP_000084268.1;Name=WP_000084268.1;gbkey=CDS;gene=glpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312879.1;locus_tag=AD08_RS02355;product=glycerol uptake facilitator protein GlpF;protein_id=WP_000084268.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 13679 13924 . + . ID=gene-AD08_RS02350;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=AD08_RS02350;old_locus_tag=AD08_4311 NZ_JHDJ01000187.1 Protein Homology CDS 13679 13924 . + 0 ID=cds-WP_001296623.1;Parent=gene-AD08_RS02350;Dbxref=Genbank:WP_001296623.1;Name=WP_001296623.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418363.1;locus_tag=AD08_RS02350;product=septal ring assembly protein ZapB;protein_id=WP_001296623.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 14009 14494 . - . ID=gene-AD08_RS02345;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=AD08_RS02345;old_locus_tag=AD08_4312 NZ_JHDJ01000187.1 Protein Homology CDS 14009 14494 . - 0 ID=cds-WP_000872908.1;Parent=gene-AD08_RS02345;Dbxref=Genbank:WP_000872908.1;Name=WP_000872908.1;gbkey=CDS;gene=rraA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=AD08_RS02345;product=ribonuclease E activity regulator RraA;protein_id=WP_000872908.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 14587 15513 . - . ID=gene-AD08_RS02340;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=AD08_RS02340;old_locus_tag=AD08_4313 NZ_JHDJ01000187.1 Protein Homology CDS 14587 15513 . - 0 ID=cds-WP_000139496.1;Parent=gene-AD08_RS02340;Dbxref=Genbank:WP_000139496.1;Name=WP_000139496.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418365.1;locus_tag=AD08_RS02340;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139496.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 15580 16911 . - . ID=gene-AD08_RS02335;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=AD08_RS02335;old_locus_tag=AD08_4314 NZ_JHDJ01000187.1 Protein Homology CDS 15580 16911 . - 0 ID=cds-WP_001293339.1;Parent=gene-AD08_RS02335;Dbxref=Genbank:WP_001293339.1;Name=WP_001293339.1;gbkey=CDS;gene=hslU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=AD08_RS02335;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293339.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 16921 17451 . - . ID=gene-AD08_RS02330;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=AD08_RS02330;old_locus_tag=AD08_4315 NZ_JHDJ01000187.1 Protein Homology CDS 16921 17451 . - 0 ID=cds-WP_000208242.1;Parent=gene-AD08_RS02330;Dbxref=Genbank:WP_000208242.1;Name=WP_000208242.1;gbkey=CDS;gene=hslV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457544.1;locus_tag=AD08_RS02330;product=ATP-dependent protease subunit HslV;protein_id=WP_000208242.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 17544 18503 . - . ID=gene-AD08_RS02325;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=AD08_RS02325;old_locus_tag=AD08_4316 NZ_JHDJ01000187.1 Protein Homology CDS 17544 18503 . - 0 ID=cds-WP_000068828.1;Parent=gene-AD08_RS02325;Dbxref=Genbank:WP_000068828.1;Name=WP_000068828.1;gbkey=CDS;gene=ftsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418368.1;locus_tag=AD08_RS02325;product=cell division protein FtsN;protein_id=WP_000068828.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 18595 19620 . - . ID=gene-AD08_RS02320;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=AD08_RS02320;old_locus_tag=AD08_4317 NZ_JHDJ01000187.1 Protein Homology CDS 18595 19620 . - 0 ID=cds-WP_000644904.1;Parent=gene-AD08_RS02320;Dbxref=Genbank:WP_000644904.1;Name=WP_000644904.1;gbkey=CDS;gene=cytR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312888.1;locus_tag=AD08_RS02320;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000644904.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 19776 21974 . - . ID=gene-AD08_RS02315;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AD08_RS02315;old_locus_tag=AD08_4318 NZ_JHDJ01000187.1 Protein Homology CDS 19776 21974 . - 0 ID=cds-WP_001301269.1;Parent=gene-AD08_RS02315;Dbxref=Genbank:WP_001301269.1;Name=WP_001301269.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418370.1;locus_tag=AD08_RS02315;product=primosomal protein N';protein_id=WP_001301269.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 22177 22389 . + . ID=gene-AD08_RS02310;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AD08_RS02310;old_locus_tag=AD08_4319 NZ_JHDJ01000187.1 Protein Homology CDS 22177 22389 . + 0 ID=cds-WP_000710769.1;Parent=gene-AD08_RS02310;Dbxref=Genbank:WP_000710769.1;Name=WP_000710769.1;gbkey=CDS;gene=rpmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312890.1;locus_tag=AD08_RS02310;product=50S ribosomal protein L31;protein_id=WP_000710769.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 22450 23058 . - . ID=gene-AD08_RS02305;Name=AD08_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02305;old_locus_tag=AD08_4320 NZ_JHDJ01000187.1 Protein Homology CDS 22450 23058 . - 0 ID=cds-WP_000797353.1;Parent=gene-AD08_RS02305;Dbxref=Genbank:WP_000797353.1;Name=WP_000797353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418372.1;locus_tag=AD08_RS02305;product=YiiX family permuted papain-like enzyme;protein_id=WP_000797353.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 23242 23559 . - . ID=gene-AD08_RS02300;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=AD08_RS02300;old_locus_tag=AD08_4321 NZ_JHDJ01000187.1 Protein Homology CDS 23242 23559 . - 0 ID=cds-WP_000852812.1;Parent=gene-AD08_RS02300;Dbxref=Genbank:WP_000852812.1;Name=WP_000852812.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=AD08_RS02300;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852812.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 23836 24996 . + . ID=gene-AD08_RS02295;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=AD08_RS02295;old_locus_tag=AD08_4322 NZ_JHDJ01000187.1 Protein Homology CDS 23836 24996 . + 0 ID=cds-WP_001295694.1;Parent=gene-AD08_RS02295;Dbxref=Genbank:WP_001295694.1;Name=WP_001295694.1;gbkey=CDS;gene=metB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418374.1;locus_tag=AD08_RS02295;product=cystathionine gamma-synthase;protein_id=WP_001295694.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 24999 27431 . + . ID=gene-AD08_RS02290;Name=AD08_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02290;old_locus_tag=AD08_4323 NZ_JHDJ01000187.1 Protein Homology CDS 24999 27431 . + 0 ID=cds-WP_003659913.1;Parent=gene-AD08_RS02290;Dbxref=Genbank:WP_003659913.1;Name=WP_003659913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=AD08_RS02290;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_003659913.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 27780 28670 . + . ID=gene-AD08_RS02280;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=AD08_RS02280;old_locus_tag=AD08_4325 NZ_JHDJ01000187.1 Protein Homology CDS 27780 28670 . + 0 ID=cds-WP_000007523.1;Parent=gene-AD08_RS02280;Dbxref=Genbank:WP_000007523.1;Name=WP_000007523.1;gbkey=CDS;gene=metF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418376.1;locus_tag=AD08_RS02280;product=methylenetetrahydrofolate reductase;protein_id=WP_000007523.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 28999 31179 . + . ID=gene-AD08_RS02275;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=AD08_RS02275;old_locus_tag=AD08_4326 NZ_JHDJ01000187.1 Protein Homology CDS 28999 31179 . + 0 ID=cds-WP_001295695.1;Parent=gene-AD08_RS02275;Dbxref=Genbank:WP_001295695.1;Name=WP_001295695.1;gbkey=CDS;gene=katG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418377.1;locus_tag=AD08_RS02275;product=catalase/peroxidase HPI;protein_id=WP_001295695.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 31272 32177 . + . ID=gene-AD08_RS02270;Name=yijE;gbkey=Gene;gene=yijE;gene_biotype=protein_coding;locus_tag=AD08_RS02270;old_locus_tag=AD08_4327 NZ_JHDJ01000187.1 Protein Homology CDS 31272 32177 . + 0 ID=cds-WP_001271242.1;Parent=gene-AD08_RS02270;Dbxref=Genbank:WP_001271242.1;Name=WP_001271242.1;gbkey=CDS;gene=yijE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418378.4;locus_tag=AD08_RS02270;product=cystine transporter YijE;protein_id=WP_001271242.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 32204 32821 . - . ID=gene-AD08_RS02265;Name=AD08_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02265;old_locus_tag=AD08_4328 NZ_JHDJ01000187.1 Protein Homology CDS 32204 32821 . - 0 ID=cds-WP_000647894.1;Parent=gene-AD08_RS02265;Dbxref=Genbank:WP_000647894.1;Name=WP_000647894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418379.1;locus_tag=AD08_RS02265;product=DUF1287 domain-containing protein;protein_id=WP_000647894.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 33096 34199 . - . ID=gene-AD08_RS02260;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=AD08_RS02260;old_locus_tag=AD08_4329 NZ_JHDJ01000187.1 Protein Homology CDS 33096 34199 . - 0 ID=cds-WP_000374004.1;Parent=gene-AD08_RS02260;Dbxref=Genbank:WP_000374004.1;Name=WP_000374004.1;gbkey=CDS;gene=gldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418380.4;locus_tag=AD08_RS02260;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374004.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 34210 34872 . - . ID=gene-AD08_RS02255;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AD08_RS02255;old_locus_tag=AD08_4330 NZ_JHDJ01000187.1 Protein Homology CDS 34210 34872 . - 0 ID=cds-WP_000424840.1;Parent=gene-AD08_RS02255;Dbxref=Genbank:WP_000424840.1;Name=WP_000424840.1;gbkey=CDS;gene=fsa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418381.1;locus_tag=AD08_RS02255;product=fructose-6-phosphate aldolase;protein_id=WP_000424840.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 34884 37385 . - . ID=gene-AD08_RS02250;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AD08_RS02250;old_locus_tag=AD08_4331 NZ_JHDJ01000187.1 Protein Homology CDS 34884 37385 . - 0 ID=cds-WP_001174077.1;Parent=gene-AD08_RS02250;Dbxref=Genbank:WP_001174077.1;Name=WP_001174077.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026278.1;locus_tag=AD08_RS02250;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_001174077.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 37694 38773 . + . ID=gene-AD08_RS02245;Name=AD08_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02245;old_locus_tag=AD08_4332 NZ_JHDJ01000187.1 Protein Homology CDS 37694 38773 . + 0 ID=cds-WP_001004446.1;Parent=gene-AD08_RS02245;Dbxref=Genbank:WP_001004446.1;Name=WP_001004446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418384.1;locus_tag=AD08_RS02245;product=PTS fructose transporter subunit EIIC;protein_id=WP_001004446.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 38788 39108 . + . ID=gene-AD08_RS02240;Name=AD08_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02240;old_locus_tag=AD08_4333 NZ_JHDJ01000187.1 Protein Homology CDS 38788 39108 . + 0 ID=cds-WP_000161265.1;Parent=gene-AD08_RS02240;Dbxref=Genbank:WP_000161265.1;Name=WP_000161265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312906.1;locus_tag=AD08_RS02240;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000161265.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 39159 41456 . + . ID=gene-AD08_RS02235;Name=AD08_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02235;old_locus_tag=AD08_4334 NZ_JHDJ01000187.1 Protein Homology CDS 39159 41456 . + 0 ID=cds-WP_000184811.1;Parent=gene-AD08_RS02235;Dbxref=Genbank:WP_000184811.1;Name=WP_000184811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418386.1;locus_tag=AD08_RS02235;product=formate C-acetyltransferase;protein_id=WP_000184811.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 41422 42300 . + . ID=gene-AD08_RS02230;Name=AD08_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02230;old_locus_tag=AD08_4335 NZ_JHDJ01000187.1 Protein Homology CDS 41422 42300 . + 0 ID=cds-WP_000204105.1;Parent=gene-AD08_RS02230;Dbxref=Genbank:WP_000204105.1;Name=WP_000204105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418387.3;locus_tag=AD08_RS02230;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WP_000204105.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 42302 42643 . + . ID=gene-AD08_RS02225;Name=AD08_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02225;old_locus_tag=AD08_4336 NZ_JHDJ01000187.1 Protein Homology CDS 42302 42643 . + 0 ID=cds-WP_001406376.1;Parent=gene-AD08_RS02225;Dbxref=Genbank:WP_001406376.1;Name=WP_001406376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418388.1;locus_tag=AD08_RS02225;product=PTS fructose-like transporter subunit IIB;protein_id=WP_001406376.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 42630 43481 . - . ID=gene-AD08_RS02220;Name=AD08_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02220;old_locus_tag=AD08_4337 NZ_JHDJ01000187.1 Protein Homology CDS 42630 43481 . - 0 ID=cds-WP_032219405.1;Parent=gene-AD08_RS02220;Dbxref=Genbank:WP_032219405.1;Name=WP_032219405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418389.1;locus_tag=AD08_RS02220;product=helix-turn-helix transcriptional regulator;protein_id=WP_032219405.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 43696 45429 . - . ID=gene-AD08_RS02215;Name=cptA;gbkey=Gene;gene=cptA;gene_biotype=protein_coding;locus_tag=AD08_RS02215;old_locus_tag=AD08_4338 NZ_JHDJ01000187.1 Protein Homology CDS 43696 45429 . - 0 ID=cds-WP_000556306.1;Parent=gene-AD08_RS02215;Dbxref=Genbank:WP_000556306.1;Name=WP_000556306.1;gbkey=CDS;gene=cptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418390.1;locus_tag=AD08_RS02215;product=phosphoethanolamine transferase CptA;protein_id=WP_000556306.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 45611 48262 . - . ID=gene-AD08_RS02210;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=AD08_RS02210;old_locus_tag=AD08_4339 NZ_JHDJ01000187.1 Protein Homology CDS 45611 48262 . - 0 ID=cds-WP_001005586.1;Parent=gene-AD08_RS02210;Dbxref=Genbank:WP_001005586.1;Name=WP_001005586.1;gbkey=CDS;gene=ppc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418391.1;locus_tag=AD08_RS02210;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005586.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 49106 50257 . - . ID=gene-AD08_RS02205;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=AD08_RS02205;old_locus_tag=AD08_4340 NZ_JHDJ01000187.1 Protein Homology CDS 49106 50257 . - 0 ID=cds-WP_001298964.1-2;Parent=gene-AD08_RS02205;Dbxref=Genbank:WP_001298964.1;Name=WP_001298964.1;gbkey=CDS;gene=argE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122768.1;locus_tag=AD08_RS02205;product=acetylornithine deacetylase;protein_id=WP_001298964.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 50411 51415 . + . ID=gene-AD08_RS02200;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=AD08_RS02200;old_locus_tag=AD08_4341 NZ_JHDJ01000187.1 Protein Homology CDS 50411 51415 . + 0 ID=cds-WP_000935370.1;Parent=gene-AD08_RS02200;Dbxref=Genbank:WP_000935370.1;Name=WP_000935370.1;gbkey=CDS;gene=argC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=AD08_RS02200;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935370.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 51423 52199 . + . ID=gene-AD08_RS02195;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=AD08_RS02195;old_locus_tag=AD08_4342 NZ_JHDJ01000187.1 Protein Homology CDS 51423 52199 . + 0 ID=cds-WP_001302318.1;Parent=gene-AD08_RS02195;Dbxref=Genbank:WP_001302318.1;Name=WP_001302318.1;gbkey=CDS;gene=argB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418394.3;locus_tag=AD08_RS02195;product=acetylglutamate kinase;protein_id=WP_001302318.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 52260 53633 . + . ID=gene-AD08_RS02190;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=AD08_RS02190;old_locus_tag=AD08_4343 NZ_JHDJ01000187.1 Protein Homology CDS 52260 53633 . + 0 ID=cds-WP_001230087.1;Parent=gene-AD08_RS02190;Dbxref=Genbank:WP_001230087.1;Name=WP_001230087.1;gbkey=CDS;gene=argH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418395.1;locus_tag=AD08_RS02190;product=argininosuccinate lyase;protein_id=WP_001230087.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 53900 54817 . + . ID=gene-AD08_RS02185;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=AD08_RS02185;old_locus_tag=AD08_4344 NZ_JHDJ01000187.1 Protein Homology CDS 53900 54817 . + 0 ID=cds-WP_001025939.1;Parent=gene-AD08_RS02185;Dbxref=Genbank:WP_001025939.1;Name=WP_001025939.1;gbkey=CDS;gene=oxyR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312917.1;locus_tag=AD08_RS02185;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025939.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 54800 56200 . - . ID=gene-AD08_RS02180;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=AD08_RS02180;old_locus_tag=AD08_4345 NZ_JHDJ01000187.1 Protein Homology CDS 54800 56200 . - 0 ID=cds-WP_001120810.1;Parent=gene-AD08_RS02180;Dbxref=Genbank:WP_001120810.1;Name=WP_001120810.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418397.2;locus_tag=AD08_RS02180;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120810.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 56531 57181 . + . ID=gene-AD08_RS02175;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=AD08_RS02175;old_locus_tag=AD08_4346 NZ_JHDJ01000187.1 Protein Homology CDS 56531 57181 . + 0 ID=cds-WP_001309117.1;Parent=gene-AD08_RS02175;Dbxref=Genbank:WP_001309117.1;Name=WP_001309117.1;gbkey=CDS;gene=fabR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460670.1;locus_tag=AD08_RS02175;product=HTH-type transcriptional repressor FabR;protein_id=WP_001309117.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 57181 57540 . + . ID=gene-AD08_RS02170;Name=AD08_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02170;old_locus_tag=AD08_4347 NZ_JHDJ01000187.1 Protein Homology CDS 57181 57540 . + 0 ID=cds-WP_000806411.1;Parent=gene-AD08_RS02170;Dbxref=Genbank:WP_000806411.1;Name=WP_000806411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312922.1;locus_tag=AD08_RS02170;product=YijD family membrane protein;protein_id=WP_000806411.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 57580 58680 . - . ID=gene-AD08_RS02165;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=AD08_RS02165;old_locus_tag=AD08_4348 NZ_JHDJ01000187.1 Protein Homology CDS 57580 58680 . - 0 ID=cds-WP_000187022.1;Parent=gene-AD08_RS02165;Dbxref=Genbank:WP_000187022.1;Name=WP_000187022.1;gbkey=CDS;gene=trmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418400.1;locus_tag=AD08_RS02165;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000187022.1;transl_table=11 NZ_JHDJ01000187.1 cmsearch riboswitch 58794 58984 . + . ID=id-NZ_JHDJ01000187.1:58794..58984;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_JHDJ01000187.1 RefSeq gene 59049 60893 . + . ID=gene-AD08_RS02160;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=AD08_RS02160;old_locus_tag=AD08_4349 NZ_JHDJ01000187.1 Protein Homology CDS 59049 60893 . + 0 ID=cds-WP_032219406.1;Parent=gene-AD08_RS02160;Dbxref=Genbank:WP_032219406.1;Name=WP_032219406.1;gbkey=CDS;gene=btuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418401.1;locus_tag=AD08_RS02160;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_032219406.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 60838 61695 . + . ID=gene-AD08_RS02155;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=AD08_RS02155;old_locus_tag=AD08_4350 NZ_JHDJ01000187.1 Protein Homology CDS 60838 61695 . + 0 ID=cds-WP_000201820.1;Parent=gene-AD08_RS02155;Dbxref=Genbank:WP_000201820.1;Name=WP_000201820.1;gbkey=CDS;gene=murI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418402.2;locus_tag=AD08_RS02155;product=glutamate racemase;protein_id=WP_000201820.1;transl_table=11 NZ_JHDJ01000187.1 RefSeq gene 62069 62602 . + . ID=gene-AD08_RS0127030;Name=AD08_RS0127030;end_range=62602,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS0127030;partial=true NZ_JHDJ01000187.1 RefSeq rRNA 62069 62602 . + . ID=rna-AD08_RS0127030;Parent=gene-AD08_RS0127030;end_range=62602,.;gbkey=rRNA;locus_tag=AD08_RS0127030;partial=true;product=16S ribosomal RNA NZ_JHDJ01000187.1 RefSeq exon 62069 62602 . + . ID=exon-AD08_RS0127030-1;Parent=rna-AD08_RS0127030;end_range=62602,.;gbkey=rRNA;locus_tag=AD08_RS0127030;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDJ01000188.1 1 1766 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000188.1 RefSeq region 1 1766 . + . ID=NZ_JHDJ01000188.1:1..1766;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000188.1 RefSeq gene 330 1766 . + . ID=gene-AD08_RS02150;Name=AD08_RS02150;end_range=1766,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS02150;old_locus_tag=AD08_4351;partial=true NZ_JHDJ01000188.1 RefSeq rRNA 330 1766 . + . ID=rna-AD08_RS02150;Parent=gene-AD08_RS02150;end_range=1766,.;gbkey=rRNA;locus_tag=AD08_RS02150;partial=true;product=16S ribosomal RNA NZ_JHDJ01000188.1 RefSeq exon 330 1766 . + . ID=exon-AD08_RS02150-1;Parent=rna-AD08_RS02150;end_range=1766,.;gbkey=rRNA;locus_tag=AD08_RS02150;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDJ01000189.1 1 19756 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000189.1 RefSeq region 1 19756 . + . ID=NZ_JHDJ01000189.1:1..19756;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000189.1 RefSeq pseudogene 1 380 . - . ID=gene-AD08_RS29805;Name=AD08_RS29805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS29805;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000189.1 Protein Homology CDS 1 380 . - 0 ID=cds-AD08_RS29805;Parent=gene-AD08_RS29805;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS29805;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 908 2041 . - . ID=gene-AD08_RS02140;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=AD08_RS02140;old_locus_tag=AD08_4353 NZ_JHDJ01000189.1 Protein Homology CDS 908 2041 . - 0 ID=cds-WP_000847447.1;Parent=gene-AD08_RS02140;Dbxref=Genbank:WP_000847447.1;Name=WP_000847447.1;gbkey=CDS;gene=thiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418417.1;locus_tag=AD08_RS02140;product=2-iminoacetate synthase ThiH;protein_id=WP_000847447.1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 2038 2808 . - . ID=gene-AD08_RS02135;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=AD08_RS02135;old_locus_tag=AD08_4354 NZ_JHDJ01000189.1 Protein Homology CDS 2038 2808 . - 0 ID=cds-WP_000944104.1;Parent=gene-AD08_RS02135;Dbxref=Genbank:WP_000944104.1;Name=WP_000944104.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418418.2;locus_tag=AD08_RS02135;product=thiazole synthase;protein_id=WP_000944104.1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 2810 3010 . - . ID=gene-AD08_RS02130;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=AD08_RS02130;old_locus_tag=AD08_4355 NZ_JHDJ01000189.1 Protein Homology CDS 2810 3010 . - 0 ID=cds-WP_001166226.1;Parent=gene-AD08_RS02130;Dbxref=Genbank:WP_001166226.1;Name=WP_001166226.1;gbkey=CDS;gene=thiS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026279.1;locus_tag=AD08_RS02130;product=sulfur carrier protein ThiS;protein_id=WP_001166226.1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 2994 3749 . - . ID=gene-AD08_RS02125;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=AD08_RS02125;old_locus_tag=AD08_4356 NZ_JHDJ01000189.1 Protein Homology CDS 2994 3749 . - 0 ID=cds-WP_032219407.1;Parent=gene-AD08_RS02125;Dbxref=Genbank:WP_032219407.1;Name=WP_032219407.1;gbkey=CDS;gene=thiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418420.4;locus_tag=AD08_RS02125;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_032219407.1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 3742 4377 . - . ID=gene-AD08_RS02120;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=AD08_RS02120;old_locus_tag=AD08_4357 NZ_JHDJ01000189.1 Protein Homology CDS 3742 4377 . - 0 ID=cds-WP_000284615.1;Parent=gene-AD08_RS02120;Dbxref=Genbank:WP_000284615.1;Name=WP_000284615.1;gbkey=CDS;gene=thiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418421.1;locus_tag=AD08_RS02120;product=thiamine phosphate synthase;protein_id=WP_000284615.1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 4377 6272 . - . ID=gene-AD08_RS02115;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=AD08_RS02115;old_locus_tag=AD08_4358 NZ_JHDJ01000189.1 Protein Homology CDS 4377 6272 . - 0 ID=cds-WP_032219408.1;Parent=gene-AD08_RS02115;Dbxref=Genbank:WP_032219408.1;Name=WP_032219408.1;gbkey=CDS;gene=thiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418422.1;locus_tag=AD08_RS02115;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_032219408.1;transl_table=11 NZ_JHDJ01000189.1 cmsearch riboswitch 6353 6453 . - . ID=id-NZ_JHDJ01000189.1:6353..6453;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_JHDJ01000189.1 RefSeq gene 6505 6981 . - . ID=gene-AD08_RS02110;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=AD08_RS02110;old_locus_tag=AD08_4359 NZ_JHDJ01000189.1 Protein Homology CDS 6505 6981 . - 0 ID=cds-WP_000934302.1;Parent=gene-AD08_RS02110;Dbxref=Genbank:WP_000934302.1;Name=WP_000934302.1;gbkey=CDS;gene=rsd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312945.1;locus_tag=AD08_RS02110;product=sigma D regulator;protein_id=WP_000934302.1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 7076 7849 . + . ID=gene-AD08_RS02105;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=AD08_RS02105;old_locus_tag=AD08_4360 NZ_JHDJ01000189.1 Protein Homology CDS 7076 7849 . + 0 ID=cds-WP_000373940.1;Parent=gene-AD08_RS02105;Dbxref=Genbank:WP_000373940.1;Name=WP_000373940.1;gbkey=CDS;gene=nudC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026280.1;locus_tag=AD08_RS02105;product=NAD(+) diphosphatase;protein_id=WP_000373940.1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 7889 8953 . + . ID=gene-AD08_RS02100;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=AD08_RS02100;old_locus_tag=AD08_4361 NZ_JHDJ01000189.1 Protein Homology CDS 7889 8953 . + 0 ID=cds-WP_000137657.1;Parent=gene-AD08_RS02100;Dbxref=Genbank:WP_000137657.1;Name=WP_000137657.1;gbkey=CDS;gene=hemE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418425.1;locus_tag=AD08_RS02100;product=uroporphyrinogen decarboxylase;protein_id=WP_000137657.1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 8963 9634 . + . ID=gene-AD08_RS02095;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=AD08_RS02095;old_locus_tag=AD08_4362 NZ_JHDJ01000189.1 Protein Homology CDS 8963 9634 . + 0 ID=cds-WP_000362388.1;Parent=gene-AD08_RS02095;Dbxref=Genbank:WP_000362388.1;Name=WP_000362388.1;gbkey=CDS;gene=nfi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312948.1;locus_tag=AD08_RS02095;product=deoxyribonuclease V;protein_id=WP_000362388.1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 9677 10267 . + . ID=gene-AD08_RS02090;Name=AD08_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02090;old_locus_tag=AD08_4363 NZ_JHDJ01000189.1 Protein Homology CDS 9677 10267 . + 0 ID=cds-WP_000940106.1;Parent=gene-AD08_RS02090;Dbxref=Genbank:WP_000940106.1;Name=WP_000940106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418427.1;locus_tag=AD08_RS02090;product=YjaG family protein;protein_id=WP_000940106.1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 10454 10726 . + . ID=gene-AD08_RS02085;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=AD08_RS02085;old_locus_tag=AD08_4364 NZ_JHDJ01000189.1 Protein Homology CDS 10454 10726 . + 0 ID=cds-WP_001044513.1;Parent=gene-AD08_RS02085;Dbxref=Genbank:WP_001044513.1;Name=WP_001044513.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=AD08_RS02085;product=DNA-binding protein HU-alpha;protein_id=WP_001044513.1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 10739 11434 . + . ID=gene-AD08_RS02080;Name=AD08_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02080;old_locus_tag=AD08_4365 NZ_JHDJ01000189.1 Protein Homology CDS 10739 11434 . + 0 ID=cds-WP_001084037.1;Parent=gene-AD08_RS02080;Dbxref=Genbank:WP_001084037.1;Name=WP_001084037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418429.1;locus_tag=AD08_RS02080;product=DUF1481 domain-containing protein;protein_id=WP_001084037.1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 11436 11861 . - . ID=gene-AD08_RS02075;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=AD08_RS02075;old_locus_tag=AD08_4366 NZ_JHDJ01000189.1 Protein Homology CDS 11436 11861 . - 0 ID=cds-WP_000828222.1;Parent=gene-AD08_RS02075;Dbxref=Genbank:WP_000828222.1;Name=WP_000828222.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312952.2;locus_tag=AD08_RS02075;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828222.1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 12099 13496 . + . ID=gene-AD08_RS02070;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=AD08_RS02070;old_locus_tag=AD08_4368 NZ_JHDJ01000189.1 Protein Homology CDS 12099 13496 . + 0 ID=cds-WP_032219409.1;Parent=gene-AD08_RS02070;Dbxref=Genbank:WP_032219409.1;Name=WP_032219409.1;gbkey=CDS;gene=zraS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418431.1;locus_tag=AD08_RS02070;product=two-component system sensor histidine kinase ZraS;protein_id=WP_032219409.1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 13493 14818 . + . ID=gene-AD08_RS02065;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=AD08_RS02065;old_locus_tag=AD08_4369 NZ_JHDJ01000189.1 Protein Homology CDS 13493 14818 . + 0 ID=cds-WP_000148503.1;Parent=gene-AD08_RS02065;Dbxref=Genbank:WP_000148503.1;Name=WP_000148503.1;gbkey=CDS;gene=zraR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418432.1;locus_tag=AD08_RS02065;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_000148503.1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 14815 16104 . - . ID=gene-AD08_RS02060;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=AD08_RS02060;old_locus_tag=AD08_4370 NZ_JHDJ01000189.1 Protein Homology CDS 14815 16104 . - 0 ID=cds-WP_000866800.1;Parent=gene-AD08_RS02060;Dbxref=Genbank:WP_000866800.1;Name=WP_000866800.1;gbkey=CDS;gene=purD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418433.1;locus_tag=AD08_RS02060;product=phosphoribosylamine--glycine ligase;protein_id=WP_000866800.1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 16116 17705 . - . ID=gene-AD08_RS02055;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AD08_RS02055;old_locus_tag=AD08_4371 NZ_JHDJ01000189.1 Protein Homology CDS 16116 17705 . - 0 ID=cds-WP_001187559.1;Parent=gene-AD08_RS02055;Dbxref=Genbank:WP_001187559.1;Name=WP_001187559.1;gbkey=CDS;gene=purH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418434.1;locus_tag=AD08_RS02055;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_001187559.1;transl_table=11 NZ_JHDJ01000189.1 RefSeq gene 18320 19756 . + . ID=gene-AD08_RS02050;Name=AD08_RS02050;end_range=19756,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS02050;old_locus_tag=AD08_4373;partial=true NZ_JHDJ01000189.1 RefSeq rRNA 18320 19756 . + . ID=rna-AD08_RS02050;Parent=gene-AD08_RS02050;end_range=19756,.;gbkey=rRNA;locus_tag=AD08_RS02050;partial=true;product=16S ribosomal RNA NZ_JHDJ01000189.1 RefSeq exon 18320 19756 . + . ID=exon-AD08_RS02050-1;Parent=rna-AD08_RS02050;end_range=19756,.;gbkey=rRNA;locus_tag=AD08_RS02050;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JHDJ01000190.1 1 1415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000190.1 RefSeq region 1 1415 . + . ID=NZ_JHDJ01000190.1:1..1415;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000190.1 RefSeq gene 1 1023 . + . ID=gene-AD08_RS0127035;Name=AD08_RS0127035;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS0127035;partial=true;start_range=.,1 NZ_JHDJ01000190.1 RefSeq rRNA 1 1023 . + . ID=rna-AD08_RS0127035;Parent=gene-AD08_RS0127035;gbkey=rRNA;locus_tag=AD08_RS0127035;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDJ01000190.1 RefSeq exon 1 1023 . + . ID=exon-AD08_RS0127035-1;Parent=rna-AD08_RS0127035;gbkey=rRNA;locus_tag=AD08_RS0127035;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDJ01000190.1 RefSeq gene 1101 1216 . + . ID=gene-AD08_RS02045;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD08_RS02045;old_locus_tag=AD08_4377 NZ_JHDJ01000190.1 cmsearch rRNA 1101 1216 . + . ID=rna-AD08_RS02045;Parent=gene-AD08_RS02045;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS02045;product=5S ribosomal RNA NZ_JHDJ01000190.1 cmsearch exon 1101 1216 . + . ID=exon-AD08_RS02045-1;Parent=rna-AD08_RS02045;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS02045;product=5S ribosomal RNA NZ_JHDJ01000190.1 RefSeq gene 1231 1306 . + . ID=gene-AD08_RS02040;Name=AD08_RS02040;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS02040;old_locus_tag=AD08_4378 NZ_JHDJ01000190.1 tRNAscan-SE tRNA 1231 1306 . + . ID=rna-AD08_RS02040;Parent=gene-AD08_RS02040;anticodon=(pos:1264..1266);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS02040;product=tRNA-Thr NZ_JHDJ01000190.1 tRNAscan-SE exon 1231 1306 . + . ID=exon-AD08_RS02040-1;Parent=rna-AD08_RS02040;anticodon=(pos:1264..1266);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS02040;product=tRNA-Thr NZ_JHDJ01000190.1 RefSeq gene 1346 1415 . + . ID=gene-AD08_RS02035;Name=rrf;end_range=1415,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD08_RS02035;old_locus_tag=AD08_4379;partial=true NZ_JHDJ01000190.1 cmsearch rRNA 1346 1415 . + . ID=rna-AD08_RS02035;Parent=gene-AD08_RS02035;Dbxref=RFAM:RF00001;end_range=1415,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS02035;partial=true;product=5S ribosomal RNA NZ_JHDJ01000190.1 cmsearch exon 1346 1415 . + . ID=exon-AD08_RS02035-1;Parent=rna-AD08_RS02035;Dbxref=RFAM:RF00001;end_range=1415,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS02035;partial=true;product=5S ribosomal RNA ##sequence-region NZ_JHDJ01000191.1 1 9367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000191.1 RefSeq region 1 9367 . + . ID=NZ_JHDJ01000191.1:1..9367;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000191.1 RefSeq gene 1 1023 . + . ID=gene-AD08_RS0127040;Name=AD08_RS0127040;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD08_RS0127040;partial=true;start_range=.,1 NZ_JHDJ01000191.1 RefSeq rRNA 1 1023 . + . ID=rna-AD08_RS0127040;Parent=gene-AD08_RS0127040;gbkey=rRNA;locus_tag=AD08_RS0127040;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDJ01000191.1 RefSeq exon 1 1023 . + . ID=exon-AD08_RS0127040-1;Parent=rna-AD08_RS0127040;gbkey=rRNA;locus_tag=AD08_RS0127040;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JHDJ01000191.1 RefSeq gene 1101 1216 . + . ID=gene-AD08_RS02030;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD08_RS02030;old_locus_tag=AD08_4381 NZ_JHDJ01000191.1 cmsearch rRNA 1101 1216 . + . ID=rna-AD08_RS02030;Parent=gene-AD08_RS02030;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS02030;product=5S ribosomal RNA NZ_JHDJ01000191.1 cmsearch exon 1101 1216 . + . ID=exon-AD08_RS02030-1;Parent=rna-AD08_RS02030;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS02030;product=5S ribosomal RNA NZ_JHDJ01000191.1 RefSeq gene 1293 1676 . + . ID=gene-AD08_RS02025;Name=AD08_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02025;old_locus_tag=AD08_4382 NZ_JHDJ01000191.1 Protein Homology CDS 1293 1676 . + 0 ID=cds-WP_001326558.1;Parent=gene-AD08_RS02025;Dbxref=Genbank:WP_001326558.1;Name=WP_001326558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418435.1;locus_tag=AD08_RS02025;product=stress-induced protein;protein_id=WP_001326558.1;transl_table=11 NZ_JHDJ01000191.1 RefSeq gene 1739 2182 . - . ID=gene-AD08_RS0127045;Name=AD08_RS0127045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0127045 NZ_JHDJ01000191.1 Protein Homology CDS 1739 2182 . - 0 ID=cds-WP_000237004.1;Parent=gene-AD08_RS0127045;Dbxref=Genbank:WP_000237004.1;Name=WP_000237004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418436.1;locus_tag=AD08_RS0127045;product=acetyltransferase;protein_id=WP_000237004.1;transl_table=11 NZ_JHDJ01000191.1 RefSeq gene 2339 3268 . + . ID=gene-AD08_RS02020;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=AD08_RS02020;old_locus_tag=AD08_4384 NZ_JHDJ01000191.1 Protein Homology CDS 2339 3268 . + 0 ID=cds-WP_001122777.1;Parent=gene-AD08_RS02020;Dbxref=Genbank:WP_001122777.1;Name=WP_001122777.1;gbkey=CDS;gene=metA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=AD08_RS02020;product=homoserine O-succinyltransferase;protein_id=WP_001122777.1;transl_table=11 NZ_JHDJ01000191.1 RefSeq gene 3537 5138 . + . ID=gene-AD08_RS02015;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=AD08_RS02015;old_locus_tag=AD08_4385 NZ_JHDJ01000191.1 Protein Homology CDS 3537 5138 . + 0 ID=cds-WP_001395152.1;Parent=gene-AD08_RS02015;Dbxref=Genbank:WP_001395152.1;Name=WP_001395152.1;gbkey=CDS;gene=aceB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418438.1;locus_tag=AD08_RS02015;product=malate synthase A;protein_id=WP_001395152.1;transl_table=11 NZ_JHDJ01000191.1 RefSeq gene 5168 6472 . + . ID=gene-AD08_RS02010;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AD08_RS02010;old_locus_tag=AD08_4386 NZ_JHDJ01000191.1 Protein Homology CDS 5168 6472 . + 0 ID=cds-WP_000857856.1;Parent=gene-AD08_RS02010;Dbxref=Genbank:WP_000857856.1;Name=WP_000857856.1;gbkey=CDS;gene=aceA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418439.1;locus_tag=AD08_RS02010;product=isocitrate lyase;protein_id=WP_000857856.1;transl_table=11 NZ_JHDJ01000191.1 RefSeq gene 6753 8489 . + . ID=gene-AD08_RS02005;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=AD08_RS02005;old_locus_tag=AD08_4387 NZ_JHDJ01000191.1 Protein Homology CDS 6753 8489 . + 0 ID=cds-WP_001137220.1;Parent=gene-AD08_RS02005;Dbxref=Genbank:WP_001137220.1;Name=WP_001137220.1;gbkey=CDS;gene=aceK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418440.1;locus_tag=AD08_RS02005;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001137220.1;transl_table=11 NZ_JHDJ01000191.1 RefSeq gene 8458 8814 . - . ID=gene-AD08_RS02000;Name=AD08_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS02000;old_locus_tag=AD08_4388 NZ_JHDJ01000191.1 Protein Homology CDS 8458 8814 . - 0 ID=cds-WP_001400109.1-2;Parent=gene-AD08_RS02000;Dbxref=Genbank:WP_001400109.1;Name=WP_001400109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001315945.1;locus_tag=AD08_RS02000;product=hypothetical protein;protein_id=WP_001400109.1;transl_table=11 NZ_JHDJ01000191.1 RefSeq pseudogene 8941 9367 . + . ID=gene-AD08_RS30790;Name=AD08_RS30790;end_range=9367,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30790;partial=true;pseudo=true NZ_JHDJ01000191.1 Protein Homology CDS 8941 9367 . + 0 ID=cds-AD08_RS30790;Parent=gene-AD08_RS30790;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=9367,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS30790;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000192.1 1 129643 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000192.1 RefSeq region 1 129643 . + . ID=NZ_JHDJ01000192.1:1..129643;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000192.1 RefSeq pseudogene 1 419 . + . ID=gene-AD08_RS01995;Name=AD08_RS01995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS01995;old_locus_tag=AD08_4390;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000192.1 Protein Homology CDS 1 419 . + 2 ID=cds-AD08_RS01995;Parent=gene-AD08_RS01995;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS01995;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000192.1 RefSeq pseudogene 433 585 . - . ID=gene-AD08_RS31825;Name=AD08_RS31825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31825;old_locus_tag=AD08_4391;partial=true;pseudo=true;start_range=.,433 NZ_JHDJ01000192.1 Protein Homology CDS 433 585 . - 0 ID=cds-AD08_RS31825;Parent=gene-AD08_RS31825;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418441.1;locus_tag=AD08_RS31825;partial=true;product=ankyrin;pseudo=true;start_range=.,433;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 902 1726 . - . ID=gene-AD08_RS01990;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=AD08_RS01990;old_locus_tag=AD08_4392 NZ_JHDJ01000192.1 Protein Homology CDS 902 1726 . - 0 ID=cds-WP_032219411.1;Parent=gene-AD08_RS01990;Dbxref=Genbank:WP_032219411.1;Name=WP_032219411.1;gbkey=CDS;gene=iclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418442.2;locus_tag=AD08_RS01990;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_032219411.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 1926 5609 . + . ID=gene-AD08_RS01985;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=AD08_RS01985;old_locus_tag=AD08_4393 NZ_JHDJ01000192.1 Protein Homology CDS 1926 5609 . + 0 ID=cds-WP_000096011.1;Parent=gene-AD08_RS01985;Dbxref=Genbank:WP_000096011.1;Name=WP_000096011.1;gbkey=CDS;gene=metH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000096005.1;locus_tag=AD08_RS01985;product=methionine synthase;protein_id=WP_000096011.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 5829 7460 . + . ID=gene-AD08_RS01980;Name=AD08_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01980;old_locus_tag=AD08_4394 NZ_JHDJ01000192.1 Protein Homology CDS 5829 7460 . + 0 ID=cds-WP_000956830.1;Parent=gene-AD08_RS01980;Dbxref=Genbank:WP_000956830.1;Name=WP_000956830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418444.1;locus_tag=AD08_RS01980;product=Na/Pi cotransporter family protein;protein_id=WP_000956830.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 7551 8240 . - . ID=gene-AD08_RS01975;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=AD08_RS01975;old_locus_tag=AD08_4395 NZ_JHDJ01000192.1 Protein Homology CDS 7551 8240 . - 0 ID=cds-WP_000421763.1;Parent=gene-AD08_RS01975;Dbxref=Genbank:WP_000421763.1;Name=WP_000421763.1;gbkey=CDS;gene=pepE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312966.1;locus_tag=AD08_RS01975;product=dipeptidase PepE;protein_id=WP_000421763.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 8452 9324 . + . ID=gene-AD08_RS01970;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=AD08_RS01970;old_locus_tag=AD08_4396 NZ_JHDJ01000192.1 Protein Homology CDS 8452 9324 . + 0 ID=cds-WP_000936377.1;Parent=gene-AD08_RS01970;Dbxref=Genbank:WP_000936377.1;Name=WP_000936377.1;gbkey=CDS;gene=rluF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418446.1;locus_tag=AD08_RS01970;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000936377.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 9457 9729 . - . ID=gene-AD08_RS01965;Name=AD08_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01965;old_locus_tag=AD08_4397 NZ_JHDJ01000192.1 Protein Homology CDS 9457 9729 . - 0 ID=cds-WP_001207634.1;Parent=gene-AD08_RS01965;Dbxref=Genbank:WP_001207634.1;Name=WP_001207634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418447.1;locus_tag=AD08_RS01965;product=DUF3811 domain-containing protein;protein_id=WP_001207634.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 9982 11331 . - . ID=gene-AD08_RS01960;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AD08_RS01960;old_locus_tag=AD08_4398 NZ_JHDJ01000192.1 Protein Homology CDS 9982 11331 . - 0 ID=cds-WP_001290310.1;Parent=gene-AD08_RS01960;Dbxref=Genbank:WP_001290310.1;Name=WP_001290310.1;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418448.1;locus_tag=AD08_RS01960;product=lysine-sensitive aspartokinase 3;protein_id=WP_001290310.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 11856 13505 . + . ID=gene-AD08_RS01955;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=AD08_RS01955;old_locus_tag=AD08_4399 NZ_JHDJ01000192.1 Protein Homology CDS 11856 13505 . + 0 ID=cds-WP_000789986.1;Parent=gene-AD08_RS01955;Dbxref=Genbank:WP_000789986.1;Name=WP_000789986.1;gbkey=CDS;gene=pgi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313035.1;locus_tag=AD08_RS01955;product=glucose-6-phosphate isomerase;protein_id=WP_000789986.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 14004 14246 . + . ID=gene-AD08_RS01950;Name=AD08_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01950;old_locus_tag=AD08_4400 NZ_JHDJ01000192.1 Protein Homology CDS 14004 14246 . + 0 ID=cds-WP_000757329.1;Parent=gene-AD08_RS01950;Dbxref=Genbank:WP_000757329.1;Name=WP_000757329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=AD08_RS01950;product=hypothetical protein;protein_id=WP_000757329.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 14360 14998 . + . ID=gene-AD08_RS01945;Name=AD08_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01945;old_locus_tag=AD08_4401 NZ_JHDJ01000192.1 Protein Homology CDS 14360 14998 . + 0 ID=cds-WP_001295278.1;Parent=gene-AD08_RS01945;Dbxref=Genbank:WP_001295278.1;Name=WP_001295278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418451.4;locus_tag=AD08_RS01945;product=YjbF family lipoprotein;protein_id=WP_001295278.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 14995 15732 . + . ID=gene-AD08_RS01940;Name=AD08_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01940;old_locus_tag=AD08_4402 NZ_JHDJ01000192.1 Protein Homology CDS 14995 15732 . + 0 ID=cds-WP_000595558.1;Parent=gene-AD08_RS01940;Dbxref=Genbank:WP_000595558.1;Name=WP_000595558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418452.1;locus_tag=AD08_RS01940;product=capsule biosynthesis GfcC family protein;protein_id=WP_000595558.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 15732 17828 . + . ID=gene-AD08_RS01935;Name=AD08_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01935;old_locus_tag=AD08_4403 NZ_JHDJ01000192.1 Protein Homology CDS 15732 17828 . + 0 ID=cds-WP_000745776.1;Parent=gene-AD08_RS01935;Dbxref=Genbank:WP_000745776.1;Name=WP_000745776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418453.1;locus_tag=AD08_RS01935;product=YjbH domain-containing protein;protein_id=WP_000745776.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 17875 18153 . - . ID=gene-AD08_RS30800;Name=AD08_RS30800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30800 NZ_JHDJ01000192.1 Protein Homology CDS 17875 18153 . - 0 ID=cds-WP_001295279.1;Parent=gene-AD08_RS30800;Dbxref=Genbank:WP_001295279.1;Name=WP_001295279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165332.1;locus_tag=AD08_RS30800;product=periplasmic protein;protein_id=WP_001295279.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 18154 18297 . + . ID=gene-AD08_RS31830;Name=AD08_RS31830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31830;old_locus_tag=AD08_4405 NZ_JHDJ01000192.1 GeneMarkS-2+ CDS 18154 18297 . + 0 ID=cds-WP_000487766.1;Parent=gene-AD08_RS31830;Dbxref=Genbank:WP_000487766.1;Name=WP_000487766.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS31830;product=hypothetical protein;protein_id=WP_000487766.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 18423 18833 . + . ID=gene-AD08_RS01925;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=AD08_RS01925;old_locus_tag=AD08_4406 NZ_JHDJ01000192.1 Protein Homology CDS 18423 18833 . + 0 ID=cds-WP_000202902.1;Parent=gene-AD08_RS01925;Dbxref=Genbank:WP_000202902.1;Name=WP_000202902.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418454.1;locus_tag=AD08_RS01925;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000202902.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 18877 20352 . - . ID=gene-AD08_RS01920;Name=AD08_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01920;old_locus_tag=AD08_4407 NZ_JHDJ01000192.1 Protein Homology CDS 18877 20352 . - 0 ID=cds-WP_001097274.1;Parent=gene-AD08_RS01920;Dbxref=Genbank:WP_001097274.1;Name=WP_001097274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313041.1;locus_tag=AD08_RS01920;product=D-xylose transporter XylE;protein_id=WP_001097274.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 20724 21614 . - . ID=gene-AD08_RS01915;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=AD08_RS01915;old_locus_tag=AD08_4408 NZ_JHDJ01000192.1 Protein Homology CDS 20724 21614 . - 0 ID=cds-WP_001252058.1;Parent=gene-AD08_RS01915;Dbxref=Genbank:WP_001252058.1;Name=WP_001252058.1;gbkey=CDS;gene=malG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252048.1;locus_tag=AD08_RS01915;product=maltose ABC transporter permease MalG;protein_id=WP_001252058.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 21629 23173 . - . ID=gene-AD08_RS01910;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=AD08_RS01910;old_locus_tag=AD08_4409 NZ_JHDJ01000192.1 Protein Homology CDS 21629 23173 . - 0 ID=cds-WP_001297290.1;Parent=gene-AD08_RS01910;Dbxref=Genbank:WP_001297290.1;Name=WP_001297290.1;gbkey=CDS;gene=malF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418457.1;locus_tag=AD08_RS01910;product=maltose ABC transporter permease MalF;protein_id=WP_001297290.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 23327 24517 . - . ID=gene-AD08_RS01905;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=AD08_RS01905;old_locus_tag=AD08_4410 NZ_JHDJ01000192.1 Protein Homology CDS 23327 24517 . - 0 ID=cds-WP_000695387.1;Parent=gene-AD08_RS01905;Dbxref=Genbank:WP_000695387.1;Name=WP_000695387.1;gbkey=CDS;gene=malE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=AD08_RS01905;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695387.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 24882 25997 . + . ID=gene-AD08_RS01900;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=AD08_RS01900;old_locus_tag=AD08_4411 NZ_JHDJ01000192.1 Protein Homology CDS 24882 25997 . + 0 ID=cds-WP_032219412.1;Parent=gene-AD08_RS01900;Dbxref=Genbank:WP_032219412.1;Name=WP_032219412.1;gbkey=CDS;gene=malK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313045.1;locus_tag=AD08_RS01900;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_032219412.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 26069 27409 . + . ID=gene-AD08_RS01895;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=AD08_RS01895;old_locus_tag=AD08_4412 NZ_JHDJ01000192.1 Protein Homology CDS 26069 27409 . + 0 ID=cds-WP_000973663.1;Parent=gene-AD08_RS01895;Dbxref=Genbank:WP_000973663.1;Name=WP_000973663.1;gbkey=CDS;gene=lamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418460.1;locus_tag=AD08_RS01895;product=maltoporin LamB;protein_id=WP_000973663.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 27652 28572 . + . ID=gene-AD08_RS01890;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=AD08_RS01890;old_locus_tag=AD08_4413 NZ_JHDJ01000192.1 Protein Homology CDS 27652 28572 . + 0 ID=cds-WP_001326641.1;Parent=gene-AD08_RS01890;Dbxref=Genbank:WP_001326641.1;Name=WP_001326641.1;gbkey=CDS;gene=malM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418461.1;locus_tag=AD08_RS01890;product=maltose operon protein MalM;protein_id=WP_001326641.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq pseudogene 28801 30380 . + . ID=gene-AD08_RS0127075;Name=AD08_RS0127075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0127075;pseudo=true NZ_JHDJ01000192.1 Protein Homology CDS 28801 30380 . + 0 ID=cds-AD08_RS0127075;Parent=gene-AD08_RS0127075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000623317.1;locus_tag=AD08_RS0127075;product=SopA family protein;pseudo=true;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 30603 31100 . + . ID=gene-AD08_RS01885;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=AD08_RS01885;old_locus_tag=AD08_4417 NZ_JHDJ01000192.1 Protein Homology CDS 30603 31100 . + 0 ID=cds-WP_001326644.1;Parent=gene-AD08_RS01885;Dbxref=Genbank:WP_001326644.1;Name=WP_001326644.1;gbkey=CDS;gene=ubiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418463.4;locus_tag=AD08_RS01885;product=chorismate lyase;protein_id=WP_001326644.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 31113 31985 . + . ID=gene-AD08_RS01880;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=AD08_RS01880;old_locus_tag=AD08_4418 NZ_JHDJ01000192.1 Protein Homology CDS 31113 31985 . + 0 ID=cds-WP_000455227.1;Parent=gene-AD08_RS01880;Dbxref=Genbank:WP_000455227.1;Name=WP_000455227.1;gbkey=CDS;gene=ubiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313050.1;locus_tag=AD08_RS01880;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455227.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 32089 34563 . - . ID=gene-AD08_RS01875;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=AD08_RS01875;old_locus_tag=AD08_4419 NZ_JHDJ01000192.1 Protein Homology CDS 32089 34563 . - 0 ID=cds-WP_050436529.1;Parent=gene-AD08_RS01875;Dbxref=Genbank:WP_050436529.1;Name=WP_050436529.1;gbkey=CDS;gene=plsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418465.4;locus_tag=AD08_RS01875;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_050436529.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 34734 35102 . + . ID=gene-AD08_RS01870;Name=AD08_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01870;old_locus_tag=AD08_4420 NZ_JHDJ01000192.1 Protein Homology CDS 34734 35102 . + 0 ID=cds-WP_000002907.1;Parent=gene-AD08_RS01870;Dbxref=Genbank:WP_000002907.1;Name=WP_000002907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313052.1;locus_tag=AD08_RS01870;product=diacylglycerol kinase;protein_id=WP_000002907.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 35212 35820 . + . ID=gene-AD08_RS01865;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=AD08_RS01865;old_locus_tag=AD08_4421 NZ_JHDJ01000192.1 Protein Homology CDS 35212 35820 . + 0 ID=cds-WP_000646078.1;Parent=gene-AD08_RS01865;Dbxref=Genbank:WP_000646078.1;Name=WP_000646078.1;gbkey=CDS;gene=lexA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=AD08_RS01865;product=repressor LexA;protein_id=WP_000646078.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 35839 37218 . + . ID=gene-AD08_RS01860;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=AD08_RS01860;old_locus_tag=AD08_4422 NZ_JHDJ01000192.1 Protein Homology CDS 35839 37218 . + 0 ID=cds-WP_001134731.1;Parent=gene-AD08_RS01860;Dbxref=Genbank:WP_001134731.1;Name=WP_001134731.1;gbkey=CDS;gene=dinF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418468.3;locus_tag=AD08_RS01860;product=MATE family efflux transporter DinF;protein_id=WP_001134731.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 37334 37543 . + . ID=gene-AD08_RS01855;Name=AD08_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01855;old_locus_tag=AD08_4423 NZ_JHDJ01000192.1 Protein Homology CDS 37334 37543 . + 0 ID=cds-WP_001030593.1;Parent=gene-AD08_RS01855;Dbxref=Genbank:WP_001030593.1;Name=WP_001030593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=AD08_RS01855;product=CsbD family protein;protein_id=WP_001030593.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 37585 38100 . - . ID=gene-AD08_RS01850;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=AD08_RS01850;old_locus_tag=AD08_4424 NZ_JHDJ01000192.1 Protein Homology CDS 37585 38100 . - 0 ID=cds-WP_001295691.1;Parent=gene-AD08_RS01850;Dbxref=Genbank:WP_001295691.1;Name=WP_001295691.1;gbkey=CDS;gene=zur;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418470.4;locus_tag=AD08_RS01850;product=zinc uptake transcriptional repressor Zur;protein_id=WP_001295691.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 38418 38672 . + . ID=gene-AD08_RS01845;Name=AD08_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01845;old_locus_tag=AD08_4425 NZ_JHDJ01000192.1 Protein Homology CDS 38418 38672 . + 0 ID=cds-WP_000912571.1;Parent=gene-AD08_RS01845;Dbxref=Genbank:WP_000912571.1;Name=WP_000912571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418471.1;locus_tag=AD08_RS01845;product=hypothetical protein;protein_id=WP_000912571.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 38696 39403 . + . ID=gene-AD08_RS01840;Name=AD08_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01840;old_locus_tag=AD08_4426 NZ_JHDJ01000192.1 Protein Homology CDS 38696 39403 . + 0 ID=cds-WP_001311303.1;Parent=gene-AD08_RS01840;Dbxref=Genbank:WP_001311303.1;Name=WP_001311303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418472.1;locus_tag=AD08_RS01840;product=DUF2713 domain-containing protein;protein_id=WP_001311303.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 39766 40803 . + . ID=gene-AD08_RS01835;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=AD08_RS01835;old_locus_tag=AD08_4428 NZ_JHDJ01000192.1 Protein Homology CDS 39766 40803 . + 0 ID=cds-WP_001298868.1;Parent=gene-AD08_RS01835;Dbxref=Genbank:WP_001298868.1;Name=WP_001298868.1;gbkey=CDS;gene=dusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313058.1;locus_tag=AD08_RS01835;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001298868.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 40937 41179 . + . ID=gene-AD08_RS01830;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=AD08_RS01830;old_locus_tag=AD08_4429 NZ_JHDJ01000192.1 Protein Homology CDS 40937 41179 . + 0 ID=cds-WP_000891404.1;Parent=gene-AD08_RS01830;Dbxref=Genbank:WP_000891404.1;Name=WP_000891404.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313059.2;locus_tag=AD08_RS01830;product=envelope stress response protein PspG;protein_id=WP_000891404.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 41345 42328 . - . ID=gene-AD08_RS01825;Name=AD08_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01825;old_locus_tag=AD08_4430 NZ_JHDJ01000192.1 Protein Homology CDS 41345 42328 . - 0 ID=cds-WP_000235508.1;Parent=gene-AD08_RS01825;Dbxref=Genbank:WP_000235508.1;Name=WP_000235508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418475.1;locus_tag=AD08_RS01825;product=quinone oxidoreductase;protein_id=WP_000235508.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 42411 43826 . + . ID=gene-AD08_RS01820;Name=AD08_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01820;old_locus_tag=AD08_4431 NZ_JHDJ01000192.1 Protein Homology CDS 42411 43826 . + 0 ID=cds-WP_000918363.1;Parent=gene-AD08_RS01820;Dbxref=Genbank:WP_000918363.1;Name=WP_000918363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418476.1;locus_tag=AD08_RS01820;product=replicative DNA helicase;protein_id=WP_000918363.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 43879 44958 . + . ID=gene-AD08_RS01815;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AD08_RS01815;old_locus_tag=AD08_4432 NZ_JHDJ01000192.1 Protein Homology CDS 43879 44958 . + 0 ID=cds-WP_001147328.1;Parent=gene-AD08_RS01815;Dbxref=Genbank:WP_001147328.1;Name=WP_001147328.1;gbkey=CDS;gene=alr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418477.1;locus_tag=AD08_RS01815;product=alanine racemase;protein_id=WP_001147328.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 45211 46404 . + . ID=gene-AD08_RS01810;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=AD08_RS01810;old_locus_tag=AD08_4434 NZ_JHDJ01000192.1 Protein Homology CDS 45211 46404 . + 0 ID=cds-WP_000486985.1;Parent=gene-AD08_RS01810;Dbxref=Genbank:WP_000486985.1;Name=WP_000486985.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418478.1;locus_tag=AD08_RS01810;product=aromatic amino acid transaminase;protein_id=WP_000486985.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq pseudogene 46742 47148 . - . ID=gene-AD08_RS31835;Name=AD08_RS31835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31835;pseudo=true NZ_JHDJ01000192.1 Protein Homology CDS 46742 47148 . - 0 ID=cds-AD08_RS31835;Parent=gene-AD08_RS31835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709865.1;locus_tag=AD08_RS31835;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 47511 48224 . + . ID=gene-AD08_RS0127085;Name=AD08_RS0127085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0127085 NZ_JHDJ01000192.1 Protein Homology CDS 47511 48224 . + 0 ID=cds-WP_001226928.1;Parent=gene-AD08_RS0127085;Dbxref=Genbank:WP_001226928.1;Name=WP_001226928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418479.1;locus_tag=AD08_RS0127085;product=acid phosphatase AphA;protein_id=WP_001226928.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 48335 48751 . + . ID=gene-AD08_RS01805;Name=AD08_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01805;old_locus_tag=AD08_4439 NZ_JHDJ01000192.1 Protein Homology CDS 48335 48751 . + 0 ID=cds-WP_000270375.1;Parent=gene-AD08_RS01805;Dbxref=Genbank:WP_000270375.1;Name=WP_000270375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313065.1;locus_tag=AD08_RS01805;product=YjbQ family protein;protein_id=WP_000270375.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 48755 49111 . + . ID=gene-AD08_RS01800;Name=AD08_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01800;old_locus_tag=AD08_4440 NZ_JHDJ01000192.1 Protein Homology CDS 48755 49111 . + 0 ID=cds-WP_000155657.1;Parent=gene-AD08_RS01800;Dbxref=Genbank:WP_000155657.1;Name=WP_000155657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313066.1;locus_tag=AD08_RS01800;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155657.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 49146 51968 . - . ID=gene-AD08_RS01795;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=AD08_RS01795;old_locus_tag=AD08_4441 NZ_JHDJ01000192.1 Protein Homology CDS 49146 51968 . - 0 ID=cds-WP_000357740.1;Parent=gene-AD08_RS01795;Dbxref=Genbank:WP_000357740.1;Name=WP_000357740.1;gbkey=CDS;gene=uvrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418482.1;locus_tag=AD08_RS01795;product=excinuclease ABC subunit UvrA;protein_id=WP_000357740.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 52222 52758 . + . ID=gene-AD08_RS01790;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=AD08_RS01790;old_locus_tag=AD08_4442 NZ_JHDJ01000192.1 Protein Homology CDS 52222 52758 . + 0 ID=cds-WP_000168305.1;Parent=gene-AD08_RS01790;Dbxref=Genbank:WP_000168305.1;Name=WP_000168305.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224583.1;locus_tag=AD08_RS01790;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168305.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 52857 53138 . - . ID=gene-AD08_RS01785;Name=AD08_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01785;old_locus_tag=AD08_4443 NZ_JHDJ01000192.1 Protein Homology CDS 52857 53138 . - 0 ID=cds-WP_001295689.1;Parent=gene-AD08_RS01785;Dbxref=Genbank:WP_001295689.1;Name=WP_001295689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313069.2;locus_tag=AD08_RS01785;product=membrane protein;protein_id=WP_001295689.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 53568 55154 . + . ID=gene-AD08_RS01780;Name=pdeC;gbkey=Gene;gene=pdeC;gene_biotype=protein_coding;locus_tag=AD08_RS01780;old_locus_tag=AD08_4444 NZ_JHDJ01000192.1 Protein Homology CDS 53568 55154 . + 0 ID=cds-WP_000019548.1;Parent=gene-AD08_RS01780;Dbxref=Genbank:WP_000019548.1;Name=WP_000019548.1;gbkey=CDS;gene=pdeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418485.1;locus_tag=AD08_RS01780;product=c-di-GMP phosphodiesterase PdeC;protein_id=WP_000019548.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 55157 55480 . - . ID=gene-AD08_RS01775;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=AD08_RS01775;old_locus_tag=AD08_4445 NZ_JHDJ01000192.1 Protein Homology CDS 55157 55480 . - 0 ID=cds-WP_000019358.1;Parent=gene-AD08_RS01775;Dbxref=Genbank:WP_000019358.1;Name=WP_000019358.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313071.1;locus_tag=AD08_RS01775;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019358.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 55566 56030 . + . ID=gene-AD08_RS01770;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=AD08_RS01770;old_locus_tag=AD08_4446 NZ_JHDJ01000192.1 Protein Homology CDS 55566 56030 . + 0 ID=cds-WP_000412428.1;Parent=gene-AD08_RS01770;Dbxref=Genbank:WP_000412428.1;Name=WP_000412428.1;gbkey=CDS;gene=soxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313072.1;locus_tag=AD08_RS01770;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412428.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 56576 57925 . + . ID=gene-AD08_RS01765;Name=AD08_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01765;old_locus_tag=AD08_4448 NZ_JHDJ01000192.1 Protein Homology CDS 56576 57925 . + 0 ID=cds-WP_000106882.1;Parent=gene-AD08_RS01765;Dbxref=Genbank:WP_000106882.1;Name=WP_000106882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=AD08_RS01765;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106882.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 58076 59725 . + . ID=gene-AD08_RS01760;Name=AD08_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01760;old_locus_tag=AD08_4450 NZ_JHDJ01000192.1 Protein Homology CDS 58076 59725 . + 0 ID=cds-WP_000402207.1;Parent=gene-AD08_RS01760;Dbxref=Genbank:WP_000402207.1;Name=WP_000402207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313074.1;locus_tag=AD08_RS01760;product=Na+/H+ antiporter;protein_id=WP_000402207.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 59879 61171 . - . ID=gene-AD08_RS01755;Name=espX5;gbkey=Gene;gene=espX5;gene_biotype=protein_coding;locus_tag=AD08_RS01755;old_locus_tag=AD08_4451 NZ_JHDJ01000192.1 Protein Homology CDS 59879 61171 . - 0 ID=cds-WP_001270095.1;Parent=gene-AD08_RS01755;Dbxref=Genbank:WP_001270095.1;Name=WP_001270095.1;gbkey=CDS;gene=espX5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418490.1;locus_tag=AD08_RS01755;product=T3SS effector pentapeptide repeat protein EspX5;protein_id=WP_001270095.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 61349 62998 . - . ID=gene-AD08_RS01750;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=AD08_RS01750;old_locus_tag=AD08_4452 NZ_JHDJ01000192.1 Protein Homology CDS 61349 62998 . - 0 ID=cds-WP_032219413.1;Parent=gene-AD08_RS01750;Dbxref=Genbank:WP_032219413.1;Name=WP_032219413.1;gbkey=CDS;gene=actP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132593.1;locus_tag=AD08_RS01750;product=cation/acetate symporter ActP;protein_id=WP_032219413.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 62995 63309 . - . ID=gene-AD08_RS01745;Name=AD08_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01745;old_locus_tag=AD08_4453 NZ_JHDJ01000192.1 Protein Homology CDS 62995 63309 . - 0 ID=cds-WP_001014565.1;Parent=gene-AD08_RS01745;Dbxref=Genbank:WP_001014565.1;Name=WP_001014565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418492.1;locus_tag=AD08_RS01745;product=DUF485 domain-containing protein;protein_id=WP_001014565.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 63509 65467 . - . ID=gene-AD08_RS01740;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=AD08_RS01740;old_locus_tag=AD08_4454 NZ_JHDJ01000192.1 Protein Homology CDS 63509 65467 . - 0 ID=cds-WP_000078239.1;Parent=gene-AD08_RS01740;Dbxref=Genbank:WP_000078239.1;Name=WP_000078239.1;gbkey=CDS;gene=acs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006816721.1;locus_tag=AD08_RS01740;product=acetate--CoA ligase;protein_id=WP_000078239.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 65860 67296 . + . ID=gene-AD08_RS01735;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=AD08_RS01735;old_locus_tag=AD08_4455 NZ_JHDJ01000192.1 Protein Homology CDS 65860 67296 . + 0 ID=cds-WP_000196875.1;Parent=gene-AD08_RS01735;Dbxref=Genbank:WP_000196875.1;Name=WP_000196875.1;gbkey=CDS;gene=nrfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313079.1;locus_tag=AD08_RS01735;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000196875.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 67341 67907 . + . ID=gene-AD08_RS01730;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=AD08_RS01730;old_locus_tag=AD08_4456 NZ_JHDJ01000192.1 Protein Homology CDS 67341 67907 . + 0 ID=cds-WP_001295391.1;Parent=gene-AD08_RS01730;Dbxref=Genbank:WP_001295391.1;Name=WP_001295391.1;gbkey=CDS;gene=nrfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=AD08_RS01730;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_001295391.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 67904 68575 . + . ID=gene-AD08_RS01725;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=AD08_RS01725;old_locus_tag=AD08_4457 NZ_JHDJ01000192.1 Protein Homology CDS 67904 68575 . + 0 ID=cds-WP_000220281.1;Parent=gene-AD08_RS01725;Dbxref=Genbank:WP_000220281.1;Name=WP_000220281.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313081.1;locus_tag=AD08_RS01725;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_000220281.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 68572 69528 . + . ID=gene-AD08_RS01720;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=AD08_RS01720;old_locus_tag=AD08_4458 NZ_JHDJ01000192.1 Protein Homology CDS 68572 69528 . + 0 ID=cds-WP_000195171.1;Parent=gene-AD08_RS01720;Dbxref=Genbank:WP_000195171.1;Name=WP_000195171.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418497.1;locus_tag=AD08_RS01720;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_000195171.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 69548 71266 . + . ID=gene-AD08_RS01715;Name=AD08_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01715;old_locus_tag=AD08_4459 NZ_JHDJ01000192.1 Protein Homology CDS 69548 71266 . + 0 ID=cds-WP_071995846.1;Parent=gene-AD08_RS01715;Dbxref=Genbank:WP_071995846.1;Name=WP_071995846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640253.1;locus_tag=AD08_RS01715;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_071995846.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 71259 71642 . + . ID=gene-AD08_RS01710;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=protein_coding;locus_tag=AD08_RS01710;old_locus_tag=AD08_4460 NZ_JHDJ01000192.1 Protein Homology CDS 71259 71642 . + 0 ID=cds-WP_001032531.1;Parent=gene-AD08_RS01710;Dbxref=Genbank:WP_001032531.1;Name=WP_001032531.1;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418499.1;locus_tag=AD08_RS01710;product=heme lyase NrfEFG subunit NrfF;protein_id=WP_001032531.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 71639 72235 . + . ID=gene-AD08_RS01705;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=AD08_RS01705;old_locus_tag=AD08_4461 NZ_JHDJ01000192.1 Protein Homology CDS 71639 72235 . + 0 ID=cds-WP_000812896.1;Parent=gene-AD08_RS01705;Dbxref=Genbank:WP_000812896.1;Name=WP_000812896.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418500.1;locus_tag=AD08_RS01705;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000812896.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 72577 73890 . + . ID=gene-AD08_RS01700;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=AD08_RS01700;old_locus_tag=AD08_4463 NZ_JHDJ01000192.1 Protein Homology CDS 72577 73890 . + 0 ID=cds-WP_000789589.1;Parent=gene-AD08_RS01700;Dbxref=Genbank:WP_000789589.1;Name=WP_000789589.1;gbkey=CDS;gene=gltP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313086.1;locus_tag=AD08_RS01700;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000789589.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 74195 74884 . - . ID=gene-AD08_RS01695;Name=AD08_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01695;old_locus_tag=AD08_4464 NZ_JHDJ01000192.1 Protein Homology CDS 74195 74884 . - 0 ID=cds-WP_000719886.1;Parent=gene-AD08_RS01695;Dbxref=Genbank:WP_000719886.1;Name=WP_000719886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313087.1;locus_tag=AD08_RS01695;product=sel1 repeat family protein;protein_id=WP_000719886.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 74978 77125 . - . ID=gene-AD08_RS01690;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=AD08_RS01690;old_locus_tag=AD08_4465 NZ_JHDJ01000192.1 Protein Homology CDS 74978 77125 . - 0 ID=cds-WP_001300547.1;Parent=gene-AD08_RS01690;Dbxref=Genbank:WP_001300547.1;Name=WP_001300547.1;gbkey=CDS;gene=fdhF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418503.1;locus_tag=AD08_RS01690;product=formate dehydrogenase subunit alpha;protein_id=WP_001300547.1;transl_except=(pos:complement(76706..76708)%2Caa:Sec);transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 77323 78789 . - . ID=gene-AD08_RS01680;Name=mdtP;gbkey=Gene;gene=mdtP;gene_biotype=protein_coding;locus_tag=AD08_RS01680;old_locus_tag=AD08_4468 NZ_JHDJ01000192.1 Protein Homology CDS 77323 78789 . - 0 ID=cds-WP_000610601.1;Parent=gene-AD08_RS01680;Dbxref=Genbank:WP_000610601.1;Name=WP_000610601.1;gbkey=CDS;gene=mdtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418504.1;locus_tag=AD08_RS01680;product=multidrug efflux transporter outer membrane subunit MdtP;protein_id=WP_000610601.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 78786 80837 . - . ID=gene-AD08_RS01675;Name=mdtO;gbkey=Gene;gene=mdtO;gene_biotype=protein_coding;locus_tag=AD08_RS01675;old_locus_tag=AD08_4469 NZ_JHDJ01000192.1 Protein Homology CDS 78786 80837 . - 0 ID=cds-WP_032219415.1;Parent=gene-AD08_RS01675;Dbxref=Genbank:WP_032219415.1;Name=WP_032219415.1;gbkey=CDS;gene=mdtO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418505.2;locus_tag=AD08_RS01675;product=multidrug efflux transporter permease subunit MdtO;protein_id=WP_032219415.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 80837 81868 . - . ID=gene-AD08_RS01670;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=AD08_RS01670;old_locus_tag=AD08_4470 NZ_JHDJ01000192.1 Protein Homology CDS 80837 81868 . - 0 ID=cds-WP_032219416.1;Parent=gene-AD08_RS01670;Dbxref=Genbank:WP_032219416.1;Name=WP_032219416.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418506.1;locus_tag=AD08_RS01670;product=multidrug efflux transporter periplasmic adaptor subunit MdtN;protein_id=WP_032219416.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 81887 82162 . - . ID=gene-AD08_RS01665;Name=AD08_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01665;old_locus_tag=AD08_4471 NZ_JHDJ01000192.1 Protein Homology CDS 81887 82162 . - 0 ID=cds-WP_001295389.1;Parent=gene-AD08_RS01665;Dbxref=Genbank:WP_001295389.1;Name=WP_001295389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165334.1;locus_tag=AD08_RS01665;product=transporter;protein_id=WP_001295389.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 82371 84356 . - . ID=gene-AD08_RS01660;Name=yjcS;gbkey=Gene;gene=yjcS;gene_biotype=protein_coding;locus_tag=AD08_RS01660;old_locus_tag=AD08_4472 NZ_JHDJ01000192.1 Protein Homology CDS 82371 84356 . - 0 ID=cds-WP_032219417.1;Parent=gene-AD08_RS01660;Dbxref=Genbank:WP_032219417.1;Name=WP_032219417.1;gbkey=CDS;gene=yjcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418507.2;locus_tag=AD08_RS01660;product=alkyl sulfatase YjcS;protein_id=WP_032219417.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 84629 85558 . - . ID=gene-AD08_RS01655;Name=alsK;gbkey=Gene;gene=alsK;gene_biotype=protein_coding;locus_tag=AD08_RS01655;old_locus_tag=AD08_4473 NZ_JHDJ01000192.1 Protein Homology CDS 84629 85558 . - 0 ID=cds-WP_032219418.1;Parent=gene-AD08_RS01655;Dbxref=Genbank:WP_032219418.1;Name=WP_032219418.1;gbkey=CDS;gene=alsK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418508.1;locus_tag=AD08_RS01655;product=allose kinase;protein_id=WP_032219418.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 85542 86237 . - . ID=gene-AD08_RS01650;Name=AD08_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01650;old_locus_tag=AD08_4474 NZ_JHDJ01000192.1 Protein Homology CDS 85542 86237 . - 0 ID=cds-WP_001311314.1;Parent=gene-AD08_RS01650;Dbxref=Genbank:WP_001311314.1;Name=WP_001311314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418509.1;locus_tag=AD08_RS01650;product=D-allulose-6-phosphate 3-epimerase;protein_id=WP_001311314.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 86248 87228 . - . ID=gene-AD08_RS01645;Name=alsC;gbkey=Gene;gene=alsC;gene_biotype=protein_coding;locus_tag=AD08_RS01645;old_locus_tag=AD08_4475 NZ_JHDJ01000192.1 Protein Homology CDS 86248 87228 . - 0 ID=cds-WP_000507106.1;Parent=gene-AD08_RS01645;Dbxref=Genbank:WP_000507106.1;Name=WP_000507106.1;gbkey=CDS;gene=alsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418510.1;locus_tag=AD08_RS01645;product=D-allose ABC transporter permease;protein_id=WP_000507106.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 87207 88739 . - . ID=gene-AD08_RS01640;Name=AD08_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01640;old_locus_tag=AD08_4476 NZ_JHDJ01000192.1 Protein Homology CDS 87207 88739 . - 0 ID=cds-WP_000235257.1;Parent=gene-AD08_RS01640;Dbxref=Genbank:WP_000235257.1;Name=WP_000235257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418511.1;locus_tag=AD08_RS01640;product=D-allose ABC transporter ATP-binding protein AlsA;protein_id=WP_000235257.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 88866 89801 . - . ID=gene-AD08_RS01635;Name=AD08_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01635;old_locus_tag=AD08_4477 NZ_JHDJ01000192.1 Protein Homology CDS 88866 89801 . - 0 ID=cds-WP_001046187.1;Parent=gene-AD08_RS01635;Dbxref=Genbank:WP_001046187.1;Name=WP_001046187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418512.1;locus_tag=AD08_RS01635;product=D-allose transporter substrate-binding protein;protein_id=WP_001046187.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 89860 90750 . - . ID=gene-AD08_RS01630;Name=alsR;gbkey=Gene;gene=alsR;gene_biotype=protein_coding;gene_synonym=rpiR;locus_tag=AD08_RS01630;old_locus_tag=AD08_4478 NZ_JHDJ01000192.1 Protein Homology CDS 89860 90750 . - 0 ID=cds-WP_000083216.1;Parent=gene-AD08_RS01630;Dbxref=Genbank:WP_000083216.1;Name=WP_000083216.1;gbkey=CDS;gene=alsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418513.4;locus_tag=AD08_RS01630;product=als operon DNA-binding transcriptional repressor AlsR;protein_id=WP_000083216.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 91109 91558 . + . ID=gene-AD08_RS01625;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=AD08_RS01625;old_locus_tag=AD08_4479 NZ_JHDJ01000192.1 Protein Homology CDS 91109 91558 . + 0 ID=cds-WP_000716794.1;Parent=gene-AD08_RS01625;Dbxref=Genbank:WP_000716794.1;Name=WP_000716794.1;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418514.1;locus_tag=AD08_RS01625;product=bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase RpiB;protein_id=WP_000716794.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 91627 91956 . + . ID=gene-AD08_RS01620;Name=yjdP;gbkey=Gene;gene=yjdP;gene_biotype=protein_coding;locus_tag=AD08_RS01620;old_locus_tag=AD08_4480 NZ_JHDJ01000192.1 Protein Homology CDS 91627 91956 . + 0 ID=cds-WP_000819746.1;Parent=gene-AD08_RS01620;Dbxref=Genbank:WP_000819746.1;Name=WP_000819746.1;gbkey=CDS;gene=yjdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026281.1;locus_tag=AD08_RS01620;product=protein YjdP;protein_id=WP_000819746.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 92103 92861 . - . ID=gene-AD08_RS01615;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=AD08_RS01615;old_locus_tag=AD08_4481 NZ_JHDJ01000192.1 Protein Homology CDS 92103 92861 . - 0 ID=cds-WP_000059908.1;Parent=gene-AD08_RS01615;Dbxref=Genbank:WP_000059908.1;Name=WP_000059908.1;gbkey=CDS;gene=phnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418516.1;locus_tag=AD08_RS01615;product=phosphonate metabolism protein PhnP;protein_id=WP_000059908.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 92863 93297 . - . ID=gene-AD08_RS01610;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=AD08_RS01610;old_locus_tag=AD08_4482 NZ_JHDJ01000192.1 Protein Homology CDS 92863 93297 . - 0 ID=cds-WP_001110490.1;Parent=gene-AD08_RS01610;Dbxref=Genbank:WP_001110490.1;Name=WP_001110490.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=AD08_RS01610;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001110490.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 93284 93841 . - . ID=gene-AD08_RS01605;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=AD08_RS01605;old_locus_tag=AD08_4483 NZ_JHDJ01000192.1 Protein Homology CDS 93284 93841 . - 0 ID=cds-WP_032219420.1;Parent=gene-AD08_RS01605;Dbxref=Genbank:WP_032219420.1;Name=WP_032219420.1;gbkey=CDS;gene=phnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418518.1;locus_tag=AD08_RS01605;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_032219420.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 93841 94977 . - . ID=gene-AD08_RS01600;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=AD08_RS01600;old_locus_tag=AD08_4484 NZ_JHDJ01000192.1 Protein Homology CDS 93841 94977 . - 0 ID=cds-WP_001468073.1;Parent=gene-AD08_RS01600;Dbxref=Genbank:WP_001468073.1;Name=WP_001468073.1;gbkey=CDS;gene=phnM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418519.1;locus_tag=AD08_RS01600;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_001468073.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 94974 95654 . - . ID=gene-AD08_RS01595;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=AD08_RS01595;old_locus_tag=AD08_4485 NZ_JHDJ01000192.1 Protein Homology CDS 94974 95654 . - 0 ID=cds-WP_000611405.1;Parent=gene-AD08_RS01595;Dbxref=Genbank:WP_000611405.1;Name=WP_000611405.1;gbkey=CDS;gene=phnL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418520.1;locus_tag=AD08_RS01595;product=phosphonate C-P lyase system protein PhnL;protein_id=WP_000611405.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 95765 96523 . - . ID=gene-AD08_RS01590;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=AD08_RS01590;old_locus_tag=AD08_4486 NZ_JHDJ01000192.1 Protein Homology CDS 95765 96523 . - 0 ID=cds-WP_001075514.1;Parent=gene-AD08_RS01590;Dbxref=Genbank:WP_001075514.1;Name=WP_001075514.1;gbkey=CDS;gene=phnK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026282.1;locus_tag=AD08_RS01590;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_001075514.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 96520 97365 . - . ID=gene-AD08_RS01585;Name=phnJ;gbkey=Gene;gene=phnJ;gene_biotype=protein_coding;locus_tag=AD08_RS01585;old_locus_tag=AD08_4487 NZ_JHDJ01000192.1 Protein Homology CDS 96520 97365 . - 0 ID=cds-WP_000002303.1;Parent=gene-AD08_RS01585;Dbxref=Genbank:WP_000002303.1;Name=WP_000002303.1;gbkey=CDS;gene=phnJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418522.1;locus_tag=AD08_RS01585;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;protein_id=WP_000002303.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 97358 98416 . - . ID=gene-AD08_RS01580;Name=phnI;gbkey=Gene;gene=phnI;gene_biotype=protein_coding;locus_tag=AD08_RS01580;old_locus_tag=AD08_4488 NZ_JHDJ01000192.1 Protein Homology CDS 97358 98416 . - 0 ID=cds-WP_032219421.1;Parent=gene-AD08_RS01580;Dbxref=Genbank:WP_032219421.1;Name=WP_032219421.1;gbkey=CDS;gene=phnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418523.1;locus_tag=AD08_RS01580;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI;protein_id=WP_032219421.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 98416 99000 . - . ID=gene-AD08_RS01575;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=AD08_RS01575;old_locus_tag=AD08_4489 NZ_JHDJ01000192.1 Protein Homology CDS 98416 99000 . - 0 ID=cds-WP_000171628.1;Parent=gene-AD08_RS01575;Dbxref=Genbank:WP_000171628.1;Name=WP_000171628.1;gbkey=CDS;gene=phnH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418524.1;locus_tag=AD08_RS01575;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_000171628.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 98997 99449 . - . ID=gene-AD08_RS01570;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=AD08_RS01570;old_locus_tag=AD08_4490 NZ_JHDJ01000192.1 Protein Homology CDS 98997 99449 . - 0 ID=cds-WP_000542790.1;Parent=gene-AD08_RS01570;Dbxref=Genbank:WP_000542790.1;Name=WP_000542790.1;gbkey=CDS;gene=phnG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418525.1;locus_tag=AD08_RS01570;product=phosphonate C-P lyase system protein PhnG;protein_id=WP_000542790.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 99450 100175 . - . ID=gene-AD08_RS01565;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=AD08_RS01565;old_locus_tag=AD08_4491 NZ_JHDJ01000192.1 Protein Homology CDS 99450 100175 . - 0 ID=cds-WP_001295387.1;Parent=gene-AD08_RS01565;Dbxref=Genbank:WP_001295387.1;Name=WP_001295387.1;gbkey=CDS;gene=phnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418526.1;locus_tag=AD08_RS01565;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_001295387.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq pseudogene 100196 100983 . - . ID=gene-AD08_RS0127090;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=pseudogene;locus_tag=AD08_RS0127090;pseudo=true NZ_JHDJ01000192.1 Protein Homology CDS 100196 100983 . - 0 ID=cds-AD08_RS0127090;Parent=gene-AD08_RS0127090;Note=frameshifted;gbkey=CDS;gene=phnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313113.2;locus_tag=AD08_RS0127090;product=phosphonate ABC transporter%2C permease protein PhnE;pseudo=true;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 101089 102105 . - . ID=gene-AD08_RS01560;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;locus_tag=AD08_RS01560;old_locus_tag=AD08_4494 NZ_JHDJ01000192.1 Protein Homology CDS 101089 102105 . - 0 ID=cds-WP_000992002.1;Parent=gene-AD08_RS01560;Dbxref=Genbank:WP_000992002.1;Name=WP_000992002.1;gbkey=CDS;gene=phnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418529.1;locus_tag=AD08_RS01560;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_000992002.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 102130 102918 . - . ID=gene-AD08_RS01555;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=AD08_RS01555;old_locus_tag=AD08_4495 NZ_JHDJ01000192.1 Protein Homology CDS 102130 102918 . - 0 ID=cds-WP_001193409.1;Parent=gene-AD08_RS01555;Dbxref=Genbank:WP_001193409.1;Name=WP_001193409.1;gbkey=CDS;gene=phnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418530.1;locus_tag=AD08_RS01555;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_001193409.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 103051 103494 . - . ID=gene-AD08_RS01550;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=AD08_RS01550;old_locus_tag=AD08_4496 NZ_JHDJ01000192.1 Protein Homology CDS 103051 103494 . - 0 ID=cds-WP_001131339.1;Parent=gene-AD08_RS01550;Dbxref=Genbank:WP_001131339.1;Name=WP_001131339.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418531.1;locus_tag=AD08_RS01550;product=VOC family metalloprotein YjdN;protein_id=WP_001131339.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 103952 104287 . - . ID=gene-AD08_RS01545;Name=AD08_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01545;old_locus_tag=AD08_4497 NZ_JHDJ01000192.1 Protein Homology CDS 103952 104287 . - 0 ID=cds-WP_001300891.1-2;Parent=gene-AD08_RS01545;Dbxref=Genbank:WP_001300891.1;Name=WP_001300891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004856597.1;locus_tag=AD08_RS01545;product=phnA family protein;protein_id=WP_001300891.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 104688 106916 . + . ID=gene-AD08_RS01540;Name=crfC;gbkey=Gene;gene=crfC;gene_biotype=protein_coding;locus_tag=AD08_RS01540;old_locus_tag=AD08_4498 NZ_JHDJ01000192.1 Protein Homology CDS 104688 106916 . + 0 ID=cds-WP_000288603.1;Parent=gene-AD08_RS01540;Dbxref=Genbank:WP_000288603.1;Name=WP_000288603.1;gbkey=CDS;gene=crfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418533.1;locus_tag=AD08_RS01540;product=clamp-binding protein CrfC;protein_id=WP_000288603.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 106913 107791 . + . ID=gene-AD08_RS01535;Name=AD08_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01535;old_locus_tag=AD08_4499 NZ_JHDJ01000192.1 Protein Homology CDS 106913 107791 . + 0 ID=cds-WP_000169188.1;Parent=gene-AD08_RS01535;Dbxref=Genbank:WP_000169188.1;Name=WP_000169188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418534.4;locus_tag=AD08_RS01535;product=YjcZ family protein%3B yhjH motility defect suppressor;protein_id=WP_000169188.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 108055 109557 . + . ID=gene-AD08_RS01530;Name=AD08_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01530;old_locus_tag=AD08_4500 NZ_JHDJ01000192.1 Protein Homology CDS 108055 109557 . + 0 ID=cds-WP_001298520.1;Parent=gene-AD08_RS01530;Dbxref=Genbank:WP_001298520.1;Name=WP_001298520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313120.1;locus_tag=AD08_RS01530;product=glycine betaine/L-proline transporter ProP;protein_id=WP_001298520.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 109669 109758 . + . ID=gene-AD08_RS0127095;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=AD08_RS0127095 NZ_JHDJ01000192.1 Protein Homology CDS 109669 109758 . + 0 ID=cds-WP_000797657.1;Parent=gene-AD08_RS0127095;Dbxref=Genbank:WP_000797657.1;Name=WP_000797657.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003826741.1;locus_tag=AD08_RS0127095;product=LpxT activity modulator PmrR;protein_id=WP_000797657.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 109734 110834 . - . ID=gene-AD08_RS01525;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=AD08_RS01525;old_locus_tag=AD08_4501 NZ_JHDJ01000192.1 Protein Homology CDS 109734 110834 . - 0 ID=cds-WP_001051092.1;Parent=gene-AD08_RS01525;Dbxref=Genbank:WP_001051092.1;Name=WP_001051092.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709829.1;locus_tag=AD08_RS01525;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001051092.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 110835 111503 . - . ID=gene-AD08_RS01520;Name=basR;gbkey=Gene;gene=basR;gene_biotype=protein_coding;locus_tag=AD08_RS01520;old_locus_tag=AD08_4502 NZ_JHDJ01000192.1 Protein Homology CDS 110835 111503 . - 0 ID=cds-WP_001455658.1;Parent=gene-AD08_RS01520;Dbxref=Genbank:WP_001455658.1;Name=WP_001455658.1;gbkey=CDS;gene=basR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313122.1;locus_tag=AD08_RS01520;product=two-component system response regulator BasR;protein_id=WP_001455658.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 111500 113143 . - . ID=gene-AD08_RS01515;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=AD08_RS01515;old_locus_tag=AD08_4503 NZ_JHDJ01000192.1 Protein Homology CDS 111500 113143 . - 0 ID=cds-WP_000919792.1;Parent=gene-AD08_RS01515;Dbxref=Genbank:WP_000919792.1;Name=WP_000919792.1;gbkey=CDS;gene=eptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418538.2;locus_tag=AD08_RS01515;product=phosphoethanolamine transferase EptA;protein_id=WP_000919792.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 113247 114584 . - . ID=gene-AD08_RS01510;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=AD08_RS01510;old_locus_tag=AD08_4504 NZ_JHDJ01000192.1 Protein Homology CDS 113247 114584 . - 0 ID=cds-WP_032219422.1;Parent=gene-AD08_RS01510;Dbxref=Genbank:WP_032219422.1;Name=WP_032219422.1;gbkey=CDS;gene=adiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313124.1;locus_tag=AD08_RS01510;product=arginine/agmatine antiporter;protein_id=WP_032219422.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 114721 115482 . - . ID=gene-AD08_RS01505;Name=AD08_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01505;old_locus_tag=AD08_4505 NZ_JHDJ01000192.1 Protein Homology CDS 114721 115482 . - 0 ID=cds-WP_001644325.1;Parent=gene-AD08_RS01505;Dbxref=Genbank:WP_001644325.1;Name=WP_001644325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418540.1;locus_tag=AD08_RS01505;product=DNA-binding transcriptional activator AdiY;protein_id=WP_001644325.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 115807 118074 . - . ID=gene-AD08_RS01500;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=AD08_RS01500;old_locus_tag=AD08_4506 NZ_JHDJ01000192.1 Protein Homology CDS 115807 118074 . - 0 ID=cds-WP_001381593.1;Parent=gene-AD08_RS01500;Dbxref=Genbank:WP_001381593.1;Name=WP_001381593.1;gbkey=CDS;gene=adiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418541.2;locus_tag=AD08_RS01500;product=arginine decarboxylase;protein_id=WP_001381593.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 118273 119181 . - . ID=gene-AD08_RS01495;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=AD08_RS01495;old_locus_tag=AD08_4507 NZ_JHDJ01000192.1 Protein Homology CDS 118273 119181 . - 0 ID=cds-WP_001090758.1;Parent=gene-AD08_RS01495;Dbxref=Genbank:WP_001090758.1;Name=WP_001090758.1;gbkey=CDS;gene=melR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418542.1;locus_tag=AD08_RS01495;product=transcriptional regulator MelR;protein_id=WP_001090758.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 119464 120819 . + . ID=gene-AD08_RS01490;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=AD08_RS01490;old_locus_tag=AD08_4508 NZ_JHDJ01000192.1 Protein Homology CDS 119464 120819 . + 0 ID=cds-WP_004099804.1;Parent=gene-AD08_RS01490;Dbxref=Genbank:WP_004099804.1;Name=WP_004099804.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418543.1;locus_tag=AD08_RS01490;product=alpha-galactosidase;protein_id=WP_004099804.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 120934 122343 . + . ID=gene-AD08_RS01485;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=AD08_RS01485;old_locus_tag=AD08_4509 NZ_JHDJ01000192.1 Protein Homology CDS 120934 122343 . + 0 ID=cds-WP_001326610.1;Parent=gene-AD08_RS01485;Dbxref=Genbank:WP_001326610.1;Name=WP_001326610.1;gbkey=CDS;gene=melB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709821.2;locus_tag=AD08_RS01485;product=melibiose:sodium transporter MelB;protein_id=WP_001326610.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 122482 123111 . - . ID=gene-AD08_RS01480;Name=AD08_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01480;old_locus_tag=AD08_4510 NZ_JHDJ01000192.1 Protein Homology CDS 122482 123111 . - 0 ID=cds-WP_000198773.1;Parent=gene-AD08_RS01480;Dbxref=Genbank:WP_000198773.1;Name=WP_000198773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418545.1;locus_tag=AD08_RS01480;product=DUF2238 domain-containing protein;protein_id=WP_000198773.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 123234 124880 . - . ID=gene-AD08_RS01475;Name=AD08_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01475;old_locus_tag=AD08_4512 NZ_JHDJ01000192.1 Protein Homology CDS 123234 124880 . - 0 ID=cds-WP_000066707.1;Parent=gene-AD08_RS01475;Dbxref=Genbank:WP_000066707.1;Name=WP_000066707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418546.1;locus_tag=AD08_RS01475;product=class I fumarate hydratase;protein_id=WP_000066707.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 124958 126298 . - . ID=gene-AD08_RS01470;Name=AD08_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01470;old_locus_tag=AD08_4513 NZ_JHDJ01000192.1 Protein Homology CDS 124958 126298 . - 0 ID=cds-WP_000899522.1;Parent=gene-AD08_RS01470;Dbxref=Genbank:WP_000899522.1;Name=WP_000899522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313132.1;locus_tag=AD08_RS01470;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899522.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 126869 127588 . - . ID=gene-AD08_RS01465;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=AD08_RS01465;old_locus_tag=AD08_4514 NZ_JHDJ01000192.1 Protein Homology CDS 126869 127588 . - 0 ID=cds-WP_000611288.1;Parent=gene-AD08_RS01465;Dbxref=Genbank:WP_000611288.1;Name=WP_000611288.1;gbkey=CDS;gene=dcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313133.1;locus_tag=AD08_RS01465;product=two-component system response regulator DcuR;protein_id=WP_000611288.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq gene 127585 129216 . - . ID=gene-AD08_RS01460;Name=dcuS;gbkey=Gene;gene=dcuS;gene_biotype=protein_coding;locus_tag=AD08_RS01460;old_locus_tag=AD08_4515 NZ_JHDJ01000192.1 Protein Homology CDS 127585 129216 . - 0 ID=cds-WP_001216477.1;Parent=gene-AD08_RS01460;Dbxref=Genbank:WP_001216477.1;Name=WP_001216477.1;gbkey=CDS;gene=dcuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313134.1;locus_tag=AD08_RS01460;product=two-component system sensor histidine kinase DcuS;protein_id=WP_001216477.1;transl_table=11 NZ_JHDJ01000192.1 RefSeq pseudogene 129397 129459 . + . ID=gene-AD08_RS30820;Name=yjdI;end_range=129459,.;gbkey=Gene;gene=yjdI;gene_biotype=pseudogene;locus_tag=AD08_RS30820;partial=true;pseudo=true NZ_JHDJ01000192.1 Protein Homology CDS 129397 129459 . + 0 ID=cds-AD08_RS30820;Parent=gene-AD08_RS30820;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=129459,.;gbkey=CDS;gene=yjdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313135.1;locus_tag=AD08_RS30820;partial=true;product=4Fe-4S mono-cluster protein YjdI;pseudo=true;transl_table=11 NZ_JHDJ01000192.1 RefSeq pseudogene 129525 129643 . + . ID=gene-AD08_RS01455;Name=AD08_RS01455;end_range=129643,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS01455;old_locus_tag=AD08_4517;partial=true;pseudo=true NZ_JHDJ01000192.1 Protein Homology CDS 129525 129643 . + 0 ID=cds-AD08_RS01455;Parent=gene-AD08_RS01455;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=129643,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD08_RS01455;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000193.1 1 23540 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000193.1 RefSeq region 1 23540 . + . ID=NZ_JHDJ01000193.1:1..23540;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000193.1 RefSeq gene 12 878 . + . ID=gene-AD08_RS01450;Name=AD08_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01450;old_locus_tag=AD08_4518 NZ_JHDJ01000193.1 Protein Homology CDS 12 878 . + 0 ID=cds-WP_000878218.1-5;Parent=gene-AD08_RS01450;Dbxref=Genbank:WP_000878218.1;Name=WP_000878218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707076.1;locus_tag=AD08_RS01450;product=IS3 family transposase;protein_id=WP_000878218.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 891 1079 . + . ID=gene-AD08_RS0127110;Name=AD08_RS0127110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0127110 NZ_JHDJ01000193.1 Protein Homology CDS 891 1079 . + 0 ID=cds-WP_050436531.1;Parent=gene-AD08_RS0127110;Dbxref=Genbank:WP_050436531.1;Name=WP_050436531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313135.1;locus_tag=AD08_RS0127110;product=hypothetical protein;protein_id=WP_050436531.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 1091 1363 . + . ID=gene-AD08_RS01445;Name=AD08_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01445;old_locus_tag=AD08_4519 NZ_JHDJ01000193.1 Protein Homology CDS 1091 1363 . + 0 ID=cds-WP_032219426.1;Parent=gene-AD08_RS01445;Dbxref=Genbank:WP_032219426.1;Name=WP_032219426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418551.1;locus_tag=AD08_RS01445;product=N-acetyltransferase;protein_id=WP_032219426.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 1590 1886 . + . ID=gene-AD08_RS01440;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=AD08_RS01440;old_locus_tag=AD08_4520 NZ_JHDJ01000193.1 Protein Homology CDS 1590 1886 . + 0 ID=cds-WP_000398619.1;Parent=gene-AD08_RS01440;Dbxref=Genbank:WP_000398619.1;Name=WP_000398619.1;gbkey=CDS;gene=ghoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313137.1;locus_tag=AD08_RS01440;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000398619.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 1914 2087 . + . ID=gene-AD08_RS01435;Name=ghoT;gbkey=Gene;gene=ghoT;gene_biotype=protein_coding;locus_tag=AD08_RS01435;old_locus_tag=AD08_4521 NZ_JHDJ01000193.1 Protein Homology CDS 1914 2087 . + 0 ID=cds-WP_001173343.1;Parent=gene-AD08_RS01435;Dbxref=Genbank:WP_001173343.1;Name=WP_001173343.1;gbkey=CDS;gene=ghoT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588474.1;locus_tag=AD08_RS01435;product=type V toxin-antitoxin system toxin GhoT;protein_id=WP_001173343.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 2206 3723 . - . ID=gene-AD08_RS01430;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AD08_RS01430;old_locus_tag=AD08_4522 NZ_JHDJ01000193.1 Protein Homology CDS 2206 3723 . - 0 ID=cds-WP_001295074.1;Parent=gene-AD08_RS01430;Dbxref=Genbank:WP_001295074.1;Name=WP_001295074.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=AD08_RS01430;product=lysine--tRNA ligase;protein_id=WP_001295074.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 3960 5417 . - . ID=gene-AD08_RS01425;Name=dtpC;gbkey=Gene;gene=dtpC;gene_biotype=protein_coding;locus_tag=AD08_RS01425;old_locus_tag=AD08_4523 NZ_JHDJ01000193.1 Protein Homology CDS 3960 5417 . - 0 ID=cds-WP_000856829.1;Parent=gene-AD08_RS01425;Dbxref=Genbank:WP_000856829.1;Name=WP_000856829.1;gbkey=CDS;gene=dtpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418554.1;locus_tag=AD08_RS01425;product=dipeptide/tripeptide permease DtpC;protein_id=WP_000856829.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 5476 7623 . - . ID=gene-AD08_RS01420;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=AD08_RS01420;old_locus_tag=AD08_4524 NZ_JHDJ01000193.1 Protein Homology CDS 5476 7623 . - 0 ID=cds-WP_001295383.1;Parent=gene-AD08_RS01420;Dbxref=Genbank:WP_001295383.1;Name=WP_001295383.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313140.1;locus_tag=AD08_RS01420;product=lysine decarboxylase CadA;protein_id=WP_001295383.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 7703 9037 . - . ID=gene-AD08_RS01415;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=AD08_RS01415;old_locus_tag=AD08_4525 NZ_JHDJ01000193.1 Protein Homology CDS 7703 9037 . - 0 ID=cds-WP_000092909.1;Parent=gene-AD08_RS01415;Dbxref=Genbank:WP_000092909.1;Name=WP_000092909.1;gbkey=CDS;gene=cadB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313141.1;locus_tag=AD08_RS01415;product=cadaverine/lysine antiporter;protein_id=WP_000092909.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 9402 10940 . - . ID=gene-AD08_RS01410;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=AD08_RS01410;old_locus_tag=AD08_4526 NZ_JHDJ01000193.1 Protein Homology CDS 9402 10940 . - 0 ID=cds-WP_001187173.1;Parent=gene-AD08_RS01410;Dbxref=Genbank:WP_001187173.1;Name=WP_001187173.1;gbkey=CDS;gene=cadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418557.1;locus_tag=AD08_RS01410;product=DNA-binding transcriptional activator CadC;protein_id=WP_001187173.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 11557 11632 . - . ID=gene-AD08_RS01405;Name=AD08_RS01405;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS01405;old_locus_tag=AD08_4527 NZ_JHDJ01000193.1 tRNAscan-SE tRNA 11557 11632 . - . ID=rna-AD08_RS01405;Parent=gene-AD08_RS01405;anticodon=(pos:complement(11597..11599));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS01405;product=tRNA-Phe NZ_JHDJ01000193.1 tRNAscan-SE exon 11557 11632 . - . ID=exon-AD08_RS01405-1;Parent=rna-AD08_RS01405;anticodon=(pos:complement(11597..11599));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS01405;product=tRNA-Phe NZ_JHDJ01000193.1 RefSeq gene 11739 12314 . - . ID=gene-AD08_RS01400;Name=AD08_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01400;old_locus_tag=AD08_4528 NZ_JHDJ01000193.1 Protein Homology CDS 11739 12314 . - 0 ID=cds-WP_001188520.1;Parent=gene-AD08_RS01400;Dbxref=Genbank:WP_001188520.1;Name=WP_001188520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710000.1;locus_tag=AD08_RS01400;product=transcriptional regulator;protein_id=WP_001188520.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 12351 14048 . - . ID=gene-AD08_RS01395;Name=AD08_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01395;old_locus_tag=AD08_4529 NZ_JHDJ01000193.1 Protein Homology CDS 12351 14048 . - 0 ID=cds-WP_032219427.1;Parent=gene-AD08_RS01395;Dbxref=Genbank:WP_032219427.1;Name=WP_032219427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418559.1;locus_tag=AD08_RS01395;product=protein-disulfide reductase DsbD;protein_id=WP_032219427.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 14024 14362 . - . ID=gene-AD08_RS01390;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=AD08_RS01390;old_locus_tag=AD08_4530 NZ_JHDJ01000193.1 Protein Homology CDS 14024 14362 . - 0 ID=cds-WP_000883400.1;Parent=gene-AD08_RS01390;Dbxref=Genbank:WP_000883400.1;Name=WP_000883400.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313145.1;locus_tag=AD08_RS01390;product=divalent cation tolerance protein CutA;protein_id=WP_000883400.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 14478 15779 . - . ID=gene-AD08_RS01385;Name=AD08_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01385;old_locus_tag=AD08_4531 NZ_JHDJ01000193.1 Protein Homology CDS 14478 15779 . - 0 ID=cds-WP_000961959.1;Parent=gene-AD08_RS01385;Dbxref=Genbank:WP_000961959.1;Name=WP_000961959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313146.1;locus_tag=AD08_RS01385;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000961959.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 15897 17333 . - . ID=gene-AD08_RS01380;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=AD08_RS01380;old_locus_tag=AD08_4532 NZ_JHDJ01000193.1 Protein Homology CDS 15897 17333 . - 0 ID=cds-WP_000069437.1;Parent=gene-AD08_RS01380;Dbxref=Genbank:WP_000069437.1;Name=WP_000069437.1;gbkey=CDS;gene=aspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313147.2;locus_tag=AD08_RS01380;product=aspartate ammonia-lyase;protein_id=WP_000069437.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 17670 18146 . + . ID=gene-AD08_RS01375;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=AD08_RS01375;old_locus_tag=AD08_4534 NZ_JHDJ01000193.1 Protein Homology CDS 17670 18146 . + 0 ID=cds-WP_001267448.1;Parent=gene-AD08_RS01375;Dbxref=Genbank:WP_001267448.1;Name=WP_001267448.1;gbkey=CDS;gene=fxsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418564.2;locus_tag=AD08_RS01375;product=membrane protein FxsA;protein_id=WP_001267448.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 18162 19418 . - . ID=gene-AD08_RS01370;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=AD08_RS01370;old_locus_tag=AD08_4535 NZ_JHDJ01000193.1 Protein Homology CDS 18162 19418 . - 0 ID=cds-WP_032219428.1;Parent=gene-AD08_RS01370;Dbxref=Genbank:WP_032219428.1;Name=WP_032219428.1;gbkey=CDS;gene=yjeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418565.1;locus_tag=AD08_RS01370;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_032219428.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 19694 19987 . + . ID=gene-AD08_RS01365;Name=AD08_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01365;old_locus_tag=AD08_4536 NZ_JHDJ01000193.1 Protein Homology CDS 19694 19987 . + 0 ID=cds-WP_001026276.1;Parent=gene-AD08_RS01365;Dbxref=Genbank:WP_001026276.1;Name=WP_001026276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004391824.1;locus_tag=AD08_RS01365;product=co-chaperone GroES;protein_id=WP_001026276.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 20031 21677 . + . ID=gene-AD08_RS01360;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=AD08_RS01360;old_locus_tag=AD08_4537 NZ_JHDJ01000193.1 Protein Homology CDS 20031 21677 . + 0 ID=cds-WP_000729117.1;Parent=gene-AD08_RS01360;Dbxref=Genbank:WP_000729117.1;Name=WP_000729117.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=AD08_RS01360;product=chaperonin GroEL;protein_id=WP_000729117.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 21815 22168 . + . ID=gene-AD08_RS01355;Name=AD08_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01355;old_locus_tag=AD08_4538 NZ_JHDJ01000193.1 Protein Homology CDS 21815 22168 . + 0 ID=cds-WP_000558209.1;Parent=gene-AD08_RS01355;Dbxref=Genbank:WP_000558209.1;Name=WP_000558209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=AD08_RS01355;product=DUF4156 domain-containing protein;protein_id=WP_000558209.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq gene 22371 23129 . - . ID=gene-AD08_RS01350;Name=AD08_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01350;old_locus_tag=AD08_4539 NZ_JHDJ01000193.1 Protein Homology CDS 22371 23129 . - 0 ID=cds-WP_032219429.1;Parent=gene-AD08_RS01350;Dbxref=Genbank:WP_032219429.1;Name=WP_032219429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000115259.1;locus_tag=AD08_RS01350;product=hypothetical protein;protein_id=WP_032219429.1;transl_table=11 NZ_JHDJ01000193.1 RefSeq pseudogene 23196 23540 . + . ID=gene-AD08_RS0127120;Name=AD08_RS0127120;end_range=23540,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0127120;partial=true;pseudo=true NZ_JHDJ01000193.1 Protein Homology CDS 23196 23540 . + 0 ID=cds-AD08_RS0127120;Parent=gene-AD08_RS0127120;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=23540,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS0127120;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JHDJ01000194.1 1 18385 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000194.1 RefSeq region 1 18385 . + . ID=NZ_JHDJ01000194.1:1..18385;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000194.1 RefSeq pseudogene 1 322 . + . ID=gene-AD08_RS0127125;Name=AD08_RS0127125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0127125;partial=true;pseudo=true;start_range=.,1 NZ_JHDJ01000194.1 Protein Homology CDS 1 322 . + 1 ID=cds-AD08_RS0127125;Parent=gene-AD08_RS0127125;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD08_RS0127125;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JHDJ01000194.1 RefSeq pseudogene 336 446 . - . ID=gene-AD08_RS31410;Name=AD08_RS31410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31410;old_locus_tag=AD08_4542;partial=true;pseudo=true;start_range=.,336 NZ_JHDJ01000194.1 Protein Homology CDS 336 446 . - 0 ID=cds-AD08_RS31410;Parent=gene-AD08_RS31410;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313153.1;locus_tag=AD08_RS31410;partial=true;product=hypothetical protein;pseudo=true;start_range=.,336;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 841 1869 . - . ID=gene-AD08_RS01345;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=AD08_RS01345;old_locus_tag=AD08_4543 NZ_JHDJ01000194.1 Protein Homology CDS 841 1869 . - 0 ID=cds-WP_000940549.1;Parent=gene-AD08_RS01345;Dbxref=Genbank:WP_000940549.1;Name=WP_000940549.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418570.1;locus_tag=AD08_RS01345;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940549.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 1911 2477 . + . ID=gene-AD08_RS01340;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=AD08_RS01340;old_locus_tag=AD08_4544 NZ_JHDJ01000194.1 Protein Homology CDS 1911 2477 . + 0 ID=cds-WP_000257278.1;Parent=gene-AD08_RS01340;Dbxref=Genbank:WP_000257278.1;Name=WP_000257278.1;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=AD08_RS01340;product=elongation factor P;protein_id=WP_000257278.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 2529 2654 . + . ID=gene-AD08_RS01335;Name=ecnA;gbkey=Gene;gene=ecnA;gene_biotype=protein_coding;locus_tag=AD08_RS01335;old_locus_tag=AD08_4545 NZ_JHDJ01000194.1 Protein Homology CDS 2529 2654 . + 0 ID=cds-WP_000977757.1;Parent=gene-AD08_RS01335;Dbxref=Genbank:WP_000977757.1;Name=WP_000977757.1;gbkey=CDS;gene=ecnA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=AD08_RS01335;product=lipoprotein antitoxin entericidin A;protein_id=WP_000977757.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 2765 2911 . + . ID=gene-AD08_RS01330;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=AD08_RS01330;old_locus_tag=AD08_4546 NZ_JHDJ01000194.1 Protein Homology CDS 2765 2911 . + 0 ID=cds-WP_000239596.1;Parent=gene-AD08_RS01330;Dbxref=Genbank:WP_000239596.1;Name=WP_000239596.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710016.1;locus_tag=AD08_RS01330;product=lipoprotein toxin entericidin B;protein_id=WP_000239596.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 3087 3404 . + . ID=gene-AD08_RS01325;Name=AD08_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01325;old_locus_tag=AD08_4547 NZ_JHDJ01000194.1 Protein Homology CDS 3087 3404 . + 0 ID=cds-WP_000118482.1;Parent=gene-AD08_RS01325;Dbxref=Genbank:WP_000118482.1;Name=WP_000118482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418572.4;locus_tag=AD08_RS01325;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118482.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 3401 3934 . - . ID=gene-AD08_RS01320;Name=AD08_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01320;old_locus_tag=AD08_4548 NZ_JHDJ01000194.1 Protein Homology CDS 3401 3934 . - 0 ID=cds-WP_001238378.1;Parent=gene-AD08_RS01320;Dbxref=Genbank:WP_001238378.1;Name=WP_001238378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313157.1;locus_tag=AD08_RS01320;product=lipocalin Blc;protein_id=WP_001238378.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 4023 5156 . - . ID=gene-AD08_RS01315;Name=blaEC;gbkey=Gene;gene=blaEC;gene_biotype=protein_coding;locus_tag=AD08_RS01315;old_locus_tag=AD08_4549 NZ_JHDJ01000194.1 Protein Homology CDS 4023 5156 . - 0 ID=cds-WP_001336292.1;Parent=gene-AD08_RS01315;Dbxref=Genbank:WP_001336292.1;Name=WP_001336292.1;gbkey=CDS;gene=blaEC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001336292.1;locus_tag=AD08_RS01315;product=BlaEC family class C beta-lactamase;protein_id=WP_001336292.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 5219 5578 . - . ID=gene-AD08_RS01310;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=AD08_RS01310;old_locus_tag=AD08_4550 NZ_JHDJ01000194.1 Protein Homology CDS 5219 5578 . - 0 ID=cds-WP_000609663.1;Parent=gene-AD08_RS01310;Dbxref=Genbank:WP_000609663.1;Name=WP_000609663.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313159.1;locus_tag=AD08_RS01310;product=fumarate reductase subunit FrdD;protein_id=WP_000609663.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 5589 5984 . - . ID=gene-AD08_RS01305;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=AD08_RS01305;old_locus_tag=AD08_4551 NZ_JHDJ01000194.1 Protein Homology CDS 5589 5984 . - 0 ID=cds-WP_000208757.1;Parent=gene-AD08_RS01305;Dbxref=Genbank:WP_000208757.1;Name=WP_000208757.1;gbkey=CDS;gene=frdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313160.1;locus_tag=AD08_RS01305;product=fumarate reductase subunit FrdC;protein_id=WP_000208757.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 5995 6729 . - . ID=gene-AD08_RS01300;Name=AD08_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01300;old_locus_tag=AD08_4552 NZ_JHDJ01000194.1 Protein Homology CDS 5995 6729 . - 0 ID=cds-WP_000829498.1;Parent=gene-AD08_RS01300;Dbxref=Genbank:WP_000829498.1;Name=WP_000829498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=AD08_RS01300;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829498.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 6722 8530 . - . ID=gene-AD08_RS01295;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=AD08_RS01295;old_locus_tag=AD08_4553 NZ_JHDJ01000194.1 Protein Homology CDS 6722 8530 . - 0 ID=cds-WP_001192973.1;Parent=gene-AD08_RS01295;Dbxref=Genbank:WP_001192973.1;Name=WP_001192973.1;gbkey=CDS;gene=frdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418578.1;locus_tag=AD08_RS01295;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192973.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 8855 9832 . + . ID=gene-AD08_RS01290;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=AD08_RS01290;old_locus_tag=AD08_4554 NZ_JHDJ01000194.1 Protein Homology CDS 8855 9832 . + 0 ID=cds-WP_001513620.1;Parent=gene-AD08_RS01290;Dbxref=Genbank:WP_001513620.1;Name=WP_001513620.1;gbkey=CDS;gene=epmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=AD08_RS01290;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_001513620.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 10051 11553 . + . ID=gene-AD08_RS01285;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=AD08_RS01285;old_locus_tag=AD08_4555 NZ_JHDJ01000194.1 Protein Homology CDS 10051 11553 . + 0 ID=cds-WP_001336293.1;Parent=gene-AD08_RS01285;Dbxref=Genbank:WP_001336293.1;Name=WP_001336293.1;gbkey=CDS;gene=yjeM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418580.2;locus_tag=AD08_RS01285;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_001336293.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 11605 11919 . + . ID=gene-AD08_RS01280;Name=AD08_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01280;old_locus_tag=AD08_4556 NZ_JHDJ01000194.1 Protein Homology CDS 11605 11919 . + 0 ID=cds-WP_000342867.1;Parent=gene-AD08_RS01280;Dbxref=Genbank:WP_000342867.1;Name=WP_000342867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418581.1;locus_tag=AD08_RS01280;product=hypothetical protein;protein_id=WP_000342867.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 11916 12230 . + . ID=gene-AD08_RS01275;Name=AD08_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01275;old_locus_tag=AD08_4557 NZ_JHDJ01000194.1 Protein Homology CDS 11916 12230 . + 0 ID=cds-WP_001276180.1;Parent=gene-AD08_RS01275;Dbxref=Genbank:WP_001276180.1;Name=WP_001276180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418582.1;locus_tag=AD08_RS01275;product=YjeO family protein;protein_id=WP_001276180.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 12259 15582 . - . ID=gene-AD08_RS01270;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=AD08_RS01270;old_locus_tag=AD08_4558 NZ_JHDJ01000194.1 Protein Homology CDS 12259 15582 . - 0 ID=cds-WP_001236847.1;Parent=gene-AD08_RS01270;Dbxref=Genbank:WP_001236847.1;Name=WP_001236847.1;gbkey=CDS;gene=mscM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418583.1;locus_tag=AD08_RS01270;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236847.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 15604 16572 . - . ID=gene-AD08_RS01265;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=AD08_RS01265;old_locus_tag=AD08_4559 NZ_JHDJ01000194.1 Protein Homology CDS 15604 16572 . - 0 ID=cds-WP_032219433.1;Parent=gene-AD08_RS01265;Dbxref=Genbank:WP_032219433.1;Name=WP_032219433.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;gbkey=CDS;gene=psd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313166.1;locus_tag=AD08_RS01265;product=phosphatidylserine decarboxylase;protein_id=WP_032219433.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 16669 17721 . - . ID=gene-AD08_RS01260;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AD08_RS01260;old_locus_tag=AD08_4560 NZ_JHDJ01000194.1 Protein Homology CDS 16669 17721 . - 0 ID=cds-WP_000041964.1-2;Parent=gene-AD08_RS01260;Dbxref=Genbank:WP_000041964.1;Name=WP_000041964.1;gbkey=CDS;gene=rsgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418585.4;locus_tag=AD08_RS01260;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041964.1;transl_table=11 NZ_JHDJ01000194.1 RefSeq gene 17816 18361 . + . ID=gene-AD08_RS01255;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AD08_RS01255;old_locus_tag=AD08_4561 NZ_JHDJ01000194.1 Protein Homology CDS 17816 18361 . + 0 ID=cds-WP_001295188.1-3;Parent=gene-AD08_RS01255;Dbxref=Genbank:WP_001295188.1;Name=WP_001295188.1;gbkey=CDS;gene=orn;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418586.4;locus_tag=AD08_RS01255;product=oligoribonuclease;protein_id=WP_001295188.1;transl_table=11 ##sequence-region NZ_JHDJ01000195.1 1 112348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000195.1 RefSeq region 1 112348 . + . ID=NZ_JHDJ01000195.1:1..112348;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000195.1 RefSeq gene 70 145 . + . ID=gene-AD08_RS01250;Name=AD08_RS01250;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS01250;old_locus_tag=AD08_4562 NZ_JHDJ01000195.1 tRNAscan-SE tRNA 70 145 . + . ID=rna-AD08_RS01250;Parent=gene-AD08_RS01250;anticodon=(pos:103..105);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS01250;product=tRNA-Gly NZ_JHDJ01000195.1 tRNAscan-SE exon 70 145 . + . ID=exon-AD08_RS01250-1;Parent=rna-AD08_RS01250;anticodon=(pos:103..105);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS01250;product=tRNA-Gly NZ_JHDJ01000195.1 RefSeq gene 379 432 . + . ID=gene-AD08_RS31415;Name=AD08_RS31415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31415 NZ_JHDJ01000195.1 Protein Homology CDS 379 432 . + 0 ID=cds-WP_010723271.1-3;Parent=gene-AD08_RS31415;Dbxref=Genbank:WP_010723271.1;Name=WP_010723271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791261.1;locus_tag=AD08_RS31415;product=hypothetical protein;protein_id=WP_010723271.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 415 1554 . - . ID=gene-AD08_RS01245;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AD08_RS01245;old_locus_tag=AD08_4563 NZ_JHDJ01000195.1 Protein Homology CDS 415 1554 . - 0 ID=cds-WP_001294219.1-3;Parent=gene-AD08_RS01245;Dbxref=Genbank:WP_001294219.1;Name=WP_001294219.1;gbkey=CDS;gene=queG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=AD08_RS01245;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001294219.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 1553 3100 . + . ID=gene-AD08_RS01240;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=AD08_RS01240;old_locus_tag=AD08_4564 NZ_JHDJ01000195.1 Protein Homology CDS 1553 3100 . + 0 ID=cds-WP_001295189.1;Parent=gene-AD08_RS01240;Dbxref=Genbank:WP_001295189.1;Name=WP_001295189.1;gbkey=CDS;gene=nnr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418588.1;locus_tag=AD08_RS01240;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_001295189.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 3072 3533 . + . ID=gene-AD08_RS01235;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=AD08_RS01235;old_locus_tag=AD08_4565 NZ_JHDJ01000195.1 Protein Homology CDS 3072 3533 . + 0 ID=cds-WP_000981977.1;Parent=gene-AD08_RS01235;Dbxref=Genbank:WP_000981977.1;Name=WP_000981977.1;gbkey=CDS;gene=tsaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313171.1;locus_tag=AD08_RS01235;product=tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE;protein_id=WP_000981977.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 3552 4889 . + . ID=gene-AD08_RS01230;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=AD08_RS01230;old_locus_tag=AD08_4566 NZ_JHDJ01000195.1 Protein Homology CDS 3552 4889 . + 0 ID=cds-WP_000990333.1;Parent=gene-AD08_RS01230;Dbxref=Genbank:WP_000990333.1;Name=WP_000990333.1;gbkey=CDS;gene=amiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418590.1;locus_tag=AD08_RS01230;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000990333.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 4899 6746 . + . ID=gene-AD08_RS01225;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=AD08_RS01225;old_locus_tag=AD08_4567 NZ_JHDJ01000195.1 Protein Homology CDS 4899 6746 . + 0 ID=cds-WP_032219434.1;Parent=gene-AD08_RS01225;Dbxref=Genbank:WP_032219434.1;Name=WP_032219434.1;gbkey=CDS;gene=mutL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418591.1;locus_tag=AD08_RS01225;product=DNA mismatch repair endonuclease MutL;protein_id=WP_032219434.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 6739 7689 . + . ID=gene-AD08_RS01220;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=AD08_RS01220;old_locus_tag=AD08_4568 NZ_JHDJ01000195.1 Protein Homology CDS 6739 7689 . + 0 ID=cds-WP_001280345.1;Parent=gene-AD08_RS01220;Dbxref=Genbank:WP_001280345.1;Name=WP_001280345.1;gbkey=CDS;gene=miaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418592.1;locus_tag=AD08_RS01220;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001280345.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 7775 8083 . + . ID=gene-AD08_RS01215;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=AD08_RS01215;old_locus_tag=AD08_4569 NZ_JHDJ01000195.1 Protein Homology CDS 7775 8083 . + 0 ID=cds-WP_001051883.1;Parent=gene-AD08_RS01215;Dbxref=Genbank:WP_001051883.1;Name=WP_001051883.1;gbkey=CDS;gene=hfq;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313175.1;locus_tag=AD08_RS01215;product=RNA chaperone Hfq;protein_id=WP_001051883.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 8159 9439 . + . ID=gene-AD08_RS01210;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=AD08_RS01210;old_locus_tag=AD08_4570 NZ_JHDJ01000195.1 Protein Homology CDS 8159 9439 . + 0 ID=cds-WP_000460360.1;Parent=gene-AD08_RS01210;Dbxref=Genbank:WP_000460360.1;Name=WP_000460360.1;gbkey=CDS;gene=hflX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313176.1;locus_tag=AD08_RS01210;product=GTPase HflX;protein_id=WP_000460360.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 9525 10784 . + . ID=gene-AD08_RS01205;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=AD08_RS01205;old_locus_tag=AD08_4571 NZ_JHDJ01000195.1 Protein Homology CDS 9525 10784 . + 0 ID=cds-WP_000312488.1;Parent=gene-AD08_RS01205;Dbxref=Genbank:WP_000312488.1;Name=WP_000312488.1;gbkey=CDS;gene=hflK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313177.1;locus_tag=AD08_RS01205;product=FtsH protease activity modulator HflK;protein_id=WP_000312488.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 10787 11791 . + . ID=gene-AD08_RS01200;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=AD08_RS01200;old_locus_tag=AD08_4572 NZ_JHDJ01000195.1 Protein Homology CDS 10787 11791 . + 0 ID=cds-WP_001232412.1;Parent=gene-AD08_RS01200;Dbxref=Genbank:WP_001232412.1;Name=WP_001232412.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313178.1;locus_tag=AD08_RS01200;product=protease modulator HflC;protein_id=WP_001232412.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 11873 12070 . + . ID=gene-AD08_RS01195;Name=AD08_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01195;old_locus_tag=AD08_4573 NZ_JHDJ01000195.1 Protein Homology CDS 11873 12070 . + 0 ID=cds-WP_001089295.1;Parent=gene-AD08_RS01195;Dbxref=Genbank:WP_001089295.1;Name=WP_001089295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313179.1;locus_tag=AD08_RS01195;product=DUF2065 domain-containing protein;protein_id=WP_001089295.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 12174 13472 . + . ID=gene-AD08_RS01190;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=AD08_RS01190;old_locus_tag=AD08_4574 NZ_JHDJ01000195.1 Protein Homology CDS 12174 13472 . + 0 ID=cds-WP_000527955.1;Parent=gene-AD08_RS01190;Dbxref=Genbank:WP_000527955.1;Name=WP_000527955.1;gbkey=CDS;gene=purA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=AD08_RS01190;product=adenylosuccinate synthase;protein_id=WP_000527955.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 13677 14102 . + . ID=gene-AD08_RS01185;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=AD08_RS01185;old_locus_tag=AD08_4575 NZ_JHDJ01000195.1 Protein Homology CDS 13677 14102 . + 0 ID=cds-WP_001177639.1;Parent=gene-AD08_RS01185;Dbxref=Genbank:WP_001177639.1;Name=WP_001177639.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=AD08_RS01185;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177639.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 14141 16582 . + . ID=gene-AD08_RS01180;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=AD08_RS01180;old_locus_tag=AD08_4576 NZ_JHDJ01000195.1 Protein Homology CDS 14141 16582 . + 0 ID=cds-WP_000076332.1;Parent=gene-AD08_RS01180;Dbxref=Genbank:WP_000076332.1;Name=WP_000076332.1;gbkey=CDS;gene=rnr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418600.4;locus_tag=AD08_RS01180;product=ribonuclease R;protein_id=WP_000076332.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 16762 17493 . + . ID=gene-AD08_RS01175;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=AD08_RS01175;old_locus_tag=AD08_4577 NZ_JHDJ01000195.1 Protein Homology CDS 16762 17493 . + 0 ID=cds-WP_001293282.1;Parent=gene-AD08_RS01175;Dbxref=Genbank:WP_001293282.1;Name=WP_001293282.1;gbkey=CDS;gene=rlmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313183.1;locus_tag=AD08_RS01175;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293282.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 17620 18021 . + . ID=gene-AD08_RS01170;Name=AD08_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01170;old_locus_tag=AD08_4578 NZ_JHDJ01000195.1 Protein Homology CDS 17620 18021 . + 0 ID=cds-WP_000220128.1;Parent=gene-AD08_RS01170;Dbxref=Genbank:WP_000220128.1;Name=WP_000220128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313184.1;locus_tag=AD08_RS01170;product=DUF2170 family protein;protein_id=WP_000220128.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 18040 18738 . + . ID=gene-AD08_RS01165;Name=AD08_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01165;old_locus_tag=AD08_4579 NZ_JHDJ01000195.1 Protein Homology CDS 18040 18738 . + 0 ID=cds-WP_000511955.1;Parent=gene-AD08_RS01165;Dbxref=Genbank:WP_000511955.1;Name=WP_000511955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418603.1;locus_tag=AD08_RS01165;product=PspA/IM30 family protein;protein_id=WP_000511955.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 18789 19448 . + . ID=gene-AD08_RS01160;Name=AD08_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01160;old_locus_tag=AD08_4580 NZ_JHDJ01000195.1 Protein Homology CDS 18789 19448 . + 0 ID=cds-WP_000012550.1;Parent=gene-AD08_RS01160;Dbxref=Genbank:WP_000012550.1;Name=WP_000012550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418604.1;locus_tag=AD08_RS01160;product=YjfK family protein;protein_id=WP_000012550.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 19466 19864 . + . ID=gene-AD08_RS01155;Name=AD08_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01155;old_locus_tag=AD08_4581 NZ_JHDJ01000195.1 Protein Homology CDS 19466 19864 . + 0 ID=cds-WP_000547760.1;Parent=gene-AD08_RS01155;Dbxref=Genbank:WP_000547760.1;Name=WP_000547760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313187.1;locus_tag=AD08_RS01155;product=DUF350 domain-containing protein;protein_id=WP_000547760.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 19874 20512 . + . ID=gene-AD08_RS01150;Name=AD08_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01150;old_locus_tag=AD08_4582 NZ_JHDJ01000195.1 Protein Homology CDS 19874 20512 . + 0 ID=cds-WP_000101685.1;Parent=gene-AD08_RS01150;Dbxref=Genbank:WP_000101685.1;Name=WP_000101685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418606.1;locus_tag=AD08_RS01150;product=DUF1190 domain-containing protein;protein_id=WP_000101685.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq pseudogene 20515 21678 . + . ID=gene-AD08_RS0127130;Name=AD08_RS0127130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0127130;pseudo=true NZ_JHDJ01000195.1 Protein Homology CDS 20515 21678 . + 0 ID=cds-AD08_RS0127130;Parent=gene-AD08_RS0127130;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313189.1;locus_tag=AD08_RS0127130;product=glutathionylspermidine synthase family protein;pseudo=true;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 21762 23387 . + . ID=gene-AD08_RS01145;Name=AD08_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01145;old_locus_tag=AD08_4585 NZ_JHDJ01000195.1 Protein Homology CDS 21762 23387 . + 0 ID=cds-WP_001295190.1;Parent=gene-AD08_RS01145;Dbxref=Genbank:WP_001295190.1;Name=WP_001295190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418608.6;locus_tag=AD08_RS01145;product=isovaleryl-CoA dehydrogenase;protein_id=WP_001295190.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 23504 23779 . - . ID=gene-AD08_RS01140;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=AD08_RS01140;old_locus_tag=AD08_4586 NZ_JHDJ01000195.1 Protein Homology CDS 23504 23779 . - 0 ID=cds-WP_000811566.1;Parent=gene-AD08_RS01140;Dbxref=Genbank:WP_000811566.1;Name=WP_000811566.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418609.4;locus_tag=AD08_RS01140;product=protease activator YjfN;protein_id=WP_000811566.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 23928 24257 . - . ID=gene-AD08_RS01135;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=AD08_RS01135;old_locus_tag=AD08_4587 NZ_JHDJ01000195.1 Protein Homology CDS 23928 24257 . - 0 ID=cds-WP_000254633.1;Parent=gene-AD08_RS01135;Dbxref=Genbank:WP_000254633.1;Name=WP_000254633.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418610.4;locus_tag=AD08_RS01135;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000254633.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 24439 25188 . + . ID=gene-AD08_RS01130;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=AD08_RS01130;old_locus_tag=AD08_4588 NZ_JHDJ01000195.1 Protein Homology CDS 24439 25188 . + 0 ID=cds-WP_000569678.1;Parent=gene-AD08_RS01130;Dbxref=Genbank:WP_000569678.1;Name=WP_000569678.1;gbkey=CDS;gene=yjfP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418611.1;locus_tag=AD08_RS01130;product=esterase;protein_id=WP_000569678.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 25185 25940 . - . ID=gene-AD08_RS01125;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=AD08_RS01125;old_locus_tag=AD08_4589 NZ_JHDJ01000195.1 Protein Homology CDS 25185 25940 . - 0 ID=cds-WP_000133631.1;Parent=gene-AD08_RS01125;Dbxref=Genbank:WP_000133631.1;Name=WP_000133631.1;gbkey=CDS;gene=ulaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313194.1;locus_tag=AD08_RS01125;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133631.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 26048 27112 . - . ID=gene-AD08_RS01120;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=AD08_RS01120;old_locus_tag=AD08_4590 NZ_JHDJ01000195.1 Protein Homology CDS 26048 27112 . - 0 ID=cds-WP_001301370.1;Parent=gene-AD08_RS01120;Dbxref=Genbank:WP_001301370.1;Name=WP_001301370.1;gbkey=CDS;gene=ulaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=AD08_RS01120;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_001301370.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 27467 28864 . + . ID=gene-AD08_RS01115;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=AD08_RS01115;old_locus_tag=AD08_4591 NZ_JHDJ01000195.1 Protein Homology CDS 27467 28864 . + 0 ID=cds-WP_032219435.1;Parent=gene-AD08_RS01115;Dbxref=Genbank:WP_032219435.1;Name=WP_032219435.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=AD08_RS01115;product=PTS ascorbate transporter subunit IIC;protein_id=WP_032219435.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 28880 29185 . + . ID=gene-AD08_RS01110;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=AD08_RS01110;old_locus_tag=AD08_4592 NZ_JHDJ01000195.1 Protein Homology CDS 28880 29185 . + 0 ID=cds-WP_000218362.1;Parent=gene-AD08_RS01110;Dbxref=Genbank:WP_000218362.1;Name=WP_000218362.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=AD08_RS01110;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218362.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 29195 29659 . + . ID=gene-AD08_RS01105;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=AD08_RS01105;old_locus_tag=AD08_4593 NZ_JHDJ01000195.1 Protein Homology CDS 29195 29659 . + 0 ID=cds-WP_000776505.1;Parent=gene-AD08_RS01105;Dbxref=Genbank:WP_000776505.1;Name=WP_000776505.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710060.1;locus_tag=AD08_RS01105;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776505.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 29673 30323 . + . ID=gene-AD08_RS01100;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=AD08_RS01100;old_locus_tag=AD08_4594 NZ_JHDJ01000195.1 Protein Homology CDS 29673 30323 . + 0 ID=cds-WP_000056760.1;Parent=gene-AD08_RS01100;Dbxref=Genbank:WP_000056760.1;Name=WP_000056760.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313199.1;locus_tag=AD08_RS01100;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056760.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 30333 31187 . + . ID=gene-AD08_RS01095;Name=AD08_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01095;old_locus_tag=AD08_4595 NZ_JHDJ01000195.1 Protein Homology CDS 30333 31187 . + 0 ID=cds-WP_000949511.1;Parent=gene-AD08_RS01095;Dbxref=Genbank:WP_000949511.1;Name=WP_000949511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313200.1;locus_tag=AD08_RS01095;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949511.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 31187 31873 . + . ID=gene-AD08_RS01090;Name=AD08_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01090;old_locus_tag=AD08_4596 NZ_JHDJ01000195.1 Protein Homology CDS 31187 31873 . + 0 ID=cds-WP_001170848.1;Parent=gene-AD08_RS01090;Dbxref=Genbank:WP_001170848.1;Name=WP_001170848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418619.1;locus_tag=AD08_RS01090;product=L-ribulose-5-phosphate 4-epimerase UlaF;protein_id=WP_001170848.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 32002 32277 . - . ID=gene-AD08_RS01085;Name=AD08_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01085;old_locus_tag=AD08_4597 NZ_JHDJ01000195.1 Protein Homology CDS 32002 32277 . - 0 ID=cds-WP_000492914.1;Parent=gene-AD08_RS01085;Dbxref=Genbank:WP_000492914.1;Name=WP_000492914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=AD08_RS01085;product=DUF1471 domain-containing protein;protein_id=WP_000492914.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 32605 33000 . + . ID=gene-AD08_RS01075;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AD08_RS01075;old_locus_tag=AD08_4599 NZ_JHDJ01000195.1 Protein Homology CDS 32605 33000 . + 0 ID=cds-WP_001216675.1;Parent=gene-AD08_RS01075;Dbxref=Genbank:WP_001216675.1;Name=WP_001216675.1;gbkey=CDS;gene=rpsF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=AD08_RS01075;product=30S ribosomal protein S6;protein_id=WP_001216675.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 33007 33321 . + . ID=gene-AD08_RS0127135;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=AD08_RS0127135 NZ_JHDJ01000195.1 Protein Homology CDS 33007 33321 . + 0 ID=cds-WP_001296681.1;Parent=gene-AD08_RS0127135;Dbxref=Genbank:WP_001296681.1;Name=WP_001296681.1;gbkey=CDS;gene=priB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001315977.1;locus_tag=AD08_RS0127135;product=primosomal replication protein N;protein_id=WP_001296681.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 33326 33553 . + . ID=gene-AD08_RS01070;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AD08_RS01070;old_locus_tag=AD08_4600 NZ_JHDJ01000195.1 Protein Homology CDS 33326 33553 . + 0 ID=cds-WP_000135199.1;Parent=gene-AD08_RS01070;Dbxref=Genbank:WP_000135199.1;Name=WP_000135199.1;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=AD08_RS01070;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 33595 34044 . + . ID=gene-AD08_RS01065;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AD08_RS01065;old_locus_tag=AD08_4601 NZ_JHDJ01000195.1 Protein Homology CDS 33595 34044 . + 0 ID=cds-WP_001196062.1;Parent=gene-AD08_RS01065;Dbxref=Genbank:WP_001196062.1;Name=WP_001196062.1;gbkey=CDS;gene=rplI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=AD08_RS01065;product=50S ribosomal protein L9;protein_id=WP_001196062.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 34156 35127 . - . ID=gene-AD08_RS01060;Name=AD08_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01060;old_locus_tag=AD08_4602 NZ_JHDJ01000195.1 Protein Homology CDS 34156 35127 . - 0 ID=cds-WP_000695892.1;Parent=gene-AD08_RS01060;Dbxref=Genbank:WP_000695892.1;Name=WP_000695892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001422748.1;locus_tag=AD08_RS01060;product=TRAP transporter substrate-binding protein;protein_id=WP_000695892.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 35180 36481 . - . ID=gene-AD08_RS01055;Name=AD08_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01055;old_locus_tag=AD08_4603 NZ_JHDJ01000195.1 Protein Homology CDS 35180 36481 . - 0 ID=cds-WP_000386846.1;Parent=gene-AD08_RS01055;Dbxref=Genbank:WP_000386846.1;Name=WP_000386846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005557384.1;locus_tag=AD08_RS01055;product=TRAP transporter large permease;protein_id=WP_000386846.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 36524 37000 . - . ID=gene-AD08_RS01050;Name=AD08_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01050;old_locus_tag=AD08_4604 NZ_JHDJ01000195.1 Protein Homology CDS 36524 37000 . - 0 ID=cds-WP_001244358.1;Parent=gene-AD08_RS01050;Dbxref=Genbank:WP_001244358.1;Name=WP_001244358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012311688.1;locus_tag=AD08_RS01050;product=TRAP transporter small permease;protein_id=WP_001244358.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 37021 39102 . - . ID=gene-AD08_RS01045;Name=AD08_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01045;old_locus_tag=AD08_4605 NZ_JHDJ01000195.1 Protein Homology CDS 37021 39102 . - 0 ID=cds-WP_032219436.1;Parent=gene-AD08_RS01045;Dbxref=Genbank:WP_032219436.1;Name=WP_032219436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005766390.1;locus_tag=AD08_RS01045;product=FAD-binding protein;protein_id=WP_032219436.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 39099 40640 . - . ID=gene-AD08_RS01040;Name=AD08_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01040;old_locus_tag=AD08_4606 NZ_JHDJ01000195.1 Protein Homology CDS 39099 40640 . - 0 ID=cds-WP_032219437.1;Parent=gene-AD08_RS01040;Dbxref=Genbank:WP_032219437.1;Name=WP_032219437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226973.1;locus_tag=AD08_RS01040;product=CoA-transferase;protein_id=WP_032219437.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 40650 41426 . - . ID=gene-AD08_RS01035;Name=AD08_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01035;old_locus_tag=AD08_4607 NZ_JHDJ01000195.1 Protein Homology CDS 40650 41426 . - 0 ID=cds-WP_001283546.1;Parent=gene-AD08_RS01035;Dbxref=Genbank:WP_001283546.1;Name=WP_001283546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283531.1;locus_tag=AD08_RS01035;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_001283546.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 41436 42278 . - . ID=gene-AD08_RS01030;Name=AD08_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01030;old_locus_tag=AD08_4608 NZ_JHDJ01000195.1 Protein Homology CDS 41436 42278 . - 0 ID=cds-WP_001205226.1;Parent=gene-AD08_RS01030;Dbxref=Genbank:WP_001205226.1;Name=WP_001205226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001205218.1;locus_tag=AD08_RS01030;product=sugar phosphate isomerase/epimerase;protein_id=WP_001205226.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 42288 43079 . - . ID=gene-AD08_RS01025;Name=AD08_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01025;old_locus_tag=AD08_4609 NZ_JHDJ01000195.1 Protein Homology CDS 42288 43079 . - 0 ID=cds-WP_000843384.1;Parent=gene-AD08_RS01025;Dbxref=Genbank:WP_000843384.1;Name=WP_000843384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709993.2;locus_tag=AD08_RS01025;product=3-ketoacyl-ACP reductase;protein_id=WP_000843384.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 43292 43939 . + . ID=gene-AD08_RS01020;Name=AD08_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01020;old_locus_tag=AD08_4610 NZ_JHDJ01000195.1 Protein Homology CDS 43292 43939 . + 0 ID=cds-WP_032219438.1;Parent=gene-AD08_RS01020;Dbxref=Genbank:WP_032219438.1;Name=WP_032219438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709992.3;locus_tag=AD08_RS01020;product=TetR/AcrR family transcriptional regulator;protein_id=WP_032219438.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 43923 44561 . - . ID=gene-AD08_RS01015;Name=ytfB;gbkey=Gene;gene=ytfB;gene_biotype=protein_coding;locus_tag=AD08_RS01015;old_locus_tag=AD08_4611 NZ_JHDJ01000195.1 Protein Homology CDS 43923 44561 . - 0 ID=cds-WP_001119458.1;Parent=gene-AD08_RS01015;Dbxref=Genbank:WP_001119458.1;Name=WP_001119458.1;gbkey=CDS;gene=ytfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418627.4;locus_tag=AD08_RS01015;product=cell division protein YtfB;protein_id=WP_001119458.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 44780 45400 . + . ID=gene-AD08_RS01010;Name=AD08_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS01010;old_locus_tag=AD08_4612 NZ_JHDJ01000195.1 Protein Homology CDS 44780 45400 . + 0 ID=cds-WP_000211237.1;Parent=gene-AD08_RS01010;Dbxref=Genbank:WP_000211237.1;Name=WP_000211237.1;Note=FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313212.2;locus_tag=AD08_RS01010;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_000211237.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 45709 47121 . + . ID=gene-AD08_RS01005;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=AD08_RS01005;old_locus_tag=AD08_4613 NZ_JHDJ01000195.1 Protein Homology CDS 45709 47121 . + 0 ID=cds-WP_000228346.1;Parent=gene-AD08_RS01005;Dbxref=Genbank:WP_000228346.1;Name=WP_000228346.1;gbkey=CDS;gene=cycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313213.1;locus_tag=AD08_RS01005;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228346.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 47166 47828 . - . ID=gene-AD08_RS01000;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=AD08_RS01000;old_locus_tag=AD08_4614 NZ_JHDJ01000195.1 Protein Homology CDS 47166 47828 . - 0 ID=cds-WP_001501594.1;Parent=gene-AD08_RS01000;Dbxref=Genbank:WP_001501594.1;Name=WP_001501594.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418630.1;locus_tag=AD08_RS01000;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_001501594.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 47936 48901 . - . ID=gene-AD08_RS00995;Name=AD08_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00995;old_locus_tag=AD08_4615 NZ_JHDJ01000195.1 Protein Homology CDS 47936 48901 . - 0 ID=cds-WP_001295194.1;Parent=gene-AD08_RS00995;Dbxref=Genbank:WP_001295194.1;Name=WP_001295194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709987.2;locus_tag=AD08_RS00995;product=DMT family transporter;protein_id=WP_001295194.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 49010 49870 . - . ID=gene-AD08_RS00990;Name=qorB;gbkey=Gene;gene=qorB;gene_biotype=protein_coding;locus_tag=AD08_RS00990;old_locus_tag=AD08_4616 NZ_JHDJ01000195.1 Protein Homology CDS 49010 49870 . - 0 ID=cds-WP_000560597.1;Parent=gene-AD08_RS00990;Dbxref=Genbank:WP_000560597.1;Name=WP_000560597.1;gbkey=CDS;gene=qorB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001491469.1;locus_tag=AD08_RS00990;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_000560597.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 49959 50339 . + . ID=gene-AD08_RS00985;Name=AD08_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00985;old_locus_tag=AD08_4617 NZ_JHDJ01000195.1 Protein Homology CDS 49959 50339 . + 0 ID=cds-WP_000084622.1;Parent=gene-AD08_RS00985;Dbxref=Genbank:WP_000084622.1;Name=WP_000084622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418633.4;locus_tag=AD08_RS00985;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000084622.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 50462 52405 . - . ID=gene-AD08_RS00980;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=AD08_RS00980;old_locus_tag=AD08_4618 NZ_JHDJ01000195.1 Protein Homology CDS 50462 52405 . - 0 ID=cds-WP_032219439.1;Parent=gene-AD08_RS00980;Dbxref=Genbank:WP_032219439.1;Name=WP_032219439.1;gbkey=CDS;gene=cpdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418634.1;locus_tag=AD08_RS00980;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=WP_032219439.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 52595 53335 . + . ID=gene-AD08_RS00975;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=AD08_RS00975;old_locus_tag=AD08_4619 NZ_JHDJ01000195.1 Protein Homology CDS 52595 53335 . + 0 ID=cds-WP_000886900.1;Parent=gene-AD08_RS00975;Dbxref=Genbank:WP_000886900.1;Name=WP_000886900.1;gbkey=CDS;gene=cysQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313219.1;locus_tag=AD08_RS00975;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000886900.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 53325 53882 . - . ID=gene-AD08_RS00970;Name=AD08_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00970;old_locus_tag=AD08_4620 NZ_JHDJ01000195.1 Protein Homology CDS 53325 53882 . - 0 ID=cds-WP_000175286.1;Parent=gene-AD08_RS00970;Dbxref=Genbank:WP_000175286.1;Name=WP_000175286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003830421.1;locus_tag=AD08_RS00970;product=YtfJ family protein;protein_id=WP_000175286.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 54207 54413 . + . ID=gene-AD08_RS00965;Name=AD08_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00965;old_locus_tag=AD08_4621 NZ_JHDJ01000195.1 Protein Homology CDS 54207 54413 . + 0 ID=cds-WP_000689228.1;Parent=gene-AD08_RS00965;Dbxref=Genbank:WP_000689228.1;Name=WP_000689228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=AD08_RS00965;product=DUF1107 domain-containing protein;protein_id=WP_000689228.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 54475 55818 . - . ID=gene-AD08_RS00960;Name=AD08_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00960;old_locus_tag=AD08_4622 NZ_JHDJ01000195.1 Protein Homology CDS 54475 55818 . - 0 ID=cds-WP_001489202.1;Parent=gene-AD08_RS00960;Dbxref=Genbank:WP_001489202.1;Name=WP_001489202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313223.1;locus_tag=AD08_RS00960;product=HlyC/CorC family transporter;protein_id=WP_001489202.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 56141 56779 . - . ID=gene-AD08_RS00955;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=AD08_RS00955;old_locus_tag=AD08_4623 NZ_JHDJ01000195.1 Protein Homology CDS 56141 56779 . - 0 ID=cds-WP_001295196.1;Parent=gene-AD08_RS00955;Dbxref=Genbank:WP_001295196.1;Name=WP_001295196.1;gbkey=CDS;gene=msrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418640.1;locus_tag=AD08_RS00955;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_001295196.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 56985 58718 . + . ID=gene-AD08_RS00945;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=AD08_RS00945;old_locus_tag=AD08_4625 NZ_JHDJ01000195.1 Protein Homology CDS 56985 58718 . + 0 ID=cds-WP_032219440.1;Parent=gene-AD08_RS00945;Dbxref=Genbank:WP_032219440.1;Name=WP_032219440.1;gbkey=CDS;gene=tamA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313225.1;locus_tag=AD08_RS00945;product=autotransporter assembly complex protein TamA;protein_id=WP_032219440.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 58715 62494 . + . ID=gene-AD08_RS00940;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=AD08_RS00940;old_locus_tag=AD08_4626 NZ_JHDJ01000195.1 Protein Homology CDS 58715 62494 . + 0 ID=cds-WP_000060972.1;Parent=gene-AD08_RS00940;Dbxref=Genbank:WP_000060972.1;Name=WP_000060972.1;gbkey=CDS;gene=tamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313226.1;locus_tag=AD08_RS00940;product=autotransporter assembly complex protein TamB;protein_id=WP_000060972.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 62497 62838 . + . ID=gene-AD08_RS00935;Name=AD08_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00935;old_locus_tag=AD08_4627 NZ_JHDJ01000195.1 Protein Homology CDS 62497 62838 . + 0 ID=cds-WP_001219160.1;Parent=gene-AD08_RS00935;Dbxref=Genbank:WP_001219160.1;Name=WP_001219160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313227.1;locus_tag=AD08_RS00935;product=gamma-glutamylcyclotransferase;protein_id=WP_001219160.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 63218 63748 . - . ID=gene-AD08_RS00930;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=AD08_RS00930;old_locus_tag=AD08_4629 NZ_JHDJ01000195.1 Protein Homology CDS 63218 63748 . - 0 ID=cds-WP_000055072.1;Parent=gene-AD08_RS00930;Dbxref=Genbank:WP_000055072.1;Name=WP_000055072.1;gbkey=CDS;gene=ppa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=AD08_RS00930;product=inorganic diphosphatase;protein_id=WP_000055072.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 64058 65014 . + . ID=gene-AD08_RS00925;Name=ytfQ;gbkey=Gene;gene=ytfQ;gene_biotype=protein_coding;locus_tag=AD08_RS00925;old_locus_tag=AD08_4630 NZ_JHDJ01000195.1 Protein Homology CDS 64058 65014 . + 0 ID=cds-WP_000265933.1;Parent=gene-AD08_RS00925;Dbxref=Genbank:WP_000265933.1;Name=WP_000265933.1;gbkey=CDS;gene=ytfQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134480.1;locus_tag=AD08_RS00925;product=galactofuranose ABC transporter substrate-binding protein YtfQ;protein_id=WP_000265933.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 65154 66656 . + . ID=gene-AD08_RS00920;Name=AD08_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00920;old_locus_tag=AD08_4631 NZ_JHDJ01000195.1 Protein Homology CDS 65154 66656 . + 0 ID=cds-WP_000210557.1;Parent=gene-AD08_RS00920;Dbxref=Genbank:WP_000210557.1;Name=WP_000210557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026286.1;locus_tag=AD08_RS00920;product=sugar ABC transporter ATP-binding protein;protein_id=WP_000210557.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 66670 67692 . + . ID=gene-AD08_RS00915;Name=AD08_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00915;old_locus_tag=AD08_4632 NZ_JHDJ01000195.1 Protein Homology CDS 66670 67692 . + 0 ID=cds-WP_001495722.1;Parent=gene-AD08_RS00915;Dbxref=Genbank:WP_001495722.1;Name=WP_001495722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313234.2;locus_tag=AD08_RS00915;product=ABC transporter permease;protein_id=WP_001495722.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 67679 68674 . + . ID=gene-AD08_RS00910;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=AD08_RS00910;old_locus_tag=AD08_4633 NZ_JHDJ01000195.1 Protein Homology CDS 67679 68674 . + 0 ID=cds-WP_000596015.1;Parent=gene-AD08_RS00910;Dbxref=Genbank:WP_000596015.1;Name=WP_000596015.1;gbkey=CDS;gene=yjfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418652.2;locus_tag=AD08_RS00910;product=sugar ABC transporter permease YjfF;protein_id=WP_000596015.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 68707 69705 . - . ID=gene-AD08_RS00905;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=AD08_RS00905;old_locus_tag=AD08_4634 NZ_JHDJ01000195.1 Protein Homology CDS 68707 69705 . - 0 ID=cds-WP_000853753.1;Parent=gene-AD08_RS00905;Dbxref=Genbank:WP_000853753.1;Name=WP_000853753.1;gbkey=CDS;gene=fbp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=AD08_RS00905;product=class 1 fructose-bisphosphatase;protein_id=WP_000853753.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 69881 71254 . + . ID=gene-AD08_RS00900;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=AD08_RS00900;old_locus_tag=AD08_4636 NZ_JHDJ01000195.1 Protein Homology CDS 69881 71254 . + 0 ID=cds-WP_001219792.1;Parent=gene-AD08_RS00900;Dbxref=Genbank:WP_001219792.1;Name=WP_001219792.1;gbkey=CDS;gene=mpl;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313237.1;locus_tag=AD08_RS00900;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219792.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 71410 71955 . - . ID=gene-AD08_RS00895;Name=AD08_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00895;old_locus_tag=AD08_4637 NZ_JHDJ01000195.1 Protein Homology CDS 71410 71955 . - 0 ID=cds-WP_001522403.1;Parent=gene-AD08_RS00895;Dbxref=Genbank:WP_001522403.1;Name=WP_001522403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313238.1;locus_tag=AD08_RS00895;product=ribosome-associated protein;protein_id=WP_001522403.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 72050 73402 . + . ID=gene-AD08_RS00890;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=AD08_RS00890;old_locus_tag=AD08_4638 NZ_JHDJ01000195.1 Protein Homology CDS 72050 73402 . + 0 ID=cds-WP_001162171.1;Parent=gene-AD08_RS00890;Dbxref=Genbank:WP_001162171.1;Name=WP_001162171.1;gbkey=CDS;gene=pmbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313239.1;locus_tag=AD08_RS00890;product=metalloprotease PmbA;protein_id=WP_001162171.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 73585 73971 . + . ID=gene-AD08_RS00885;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=AD08_RS00885;old_locus_tag=AD08_4639 NZ_JHDJ01000195.1 Protein Homology CDS 73585 73971 . + 0 ID=cds-WP_001232255.1;Parent=gene-AD08_RS00885;Dbxref=Genbank:WP_001232255.1;Name=WP_001232255.1;gbkey=CDS;gene=cybC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313240.2;locus_tag=AD08_RS00885;product=cytochrome b562;protein_id=WP_001232255.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 74016 74480 . - . ID=gene-AD08_RS00880;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=AD08_RS00880;old_locus_tag=AD08_4640 NZ_JHDJ01000195.1 Protein Homology CDS 74016 74480 . - 0 ID=cds-WP_001493629.1;Parent=gene-AD08_RS00880;Dbxref=Genbank:WP_001493629.1;Name=WP_001493629.1;gbkey=CDS;gene=nrdG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313241.1;locus_tag=AD08_RS00880;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001493629.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 74638 76776 . - . ID=gene-AD08_RS00875;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=AD08_RS00875;old_locus_tag=AD08_4641 NZ_JHDJ01000195.1 Protein Homology CDS 74638 76776 . - 0 ID=cds-WP_000187791.1;Parent=gene-AD08_RS00875;Dbxref=Genbank:WP_000187791.1;Name=WP_000187791.1;gbkey=CDS;gene=nrdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004128226.1;locus_tag=AD08_RS00875;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187791.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 77170 78825 . - . ID=gene-AD08_RS00870;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=AD08_RS00870;old_locus_tag=AD08_4642 NZ_JHDJ01000195.1 Protein Homology CDS 77170 78825 . - 0 ID=cds-WP_032219441.1;Parent=gene-AD08_RS00870;Dbxref=Genbank:WP_032219441.1;Name=WP_032219441.1;gbkey=CDS;gene=treC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709962.2;locus_tag=AD08_RS00870;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_032219441.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 78875 80296 . - . ID=gene-AD08_RS00865;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=AD08_RS00865;old_locus_tag=AD08_4643 NZ_JHDJ01000195.1 Protein Homology CDS 78875 80296 . - 0 ID=cds-WP_001299664.1;Parent=gene-AD08_RS00865;Dbxref=Genbank:WP_001299664.1;Name=WP_001299664.1;gbkey=CDS;gene=treB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313244.1;locus_tag=AD08_RS00865;product=PTS trehalose transporter subunit IIBC;protein_id=WP_001299664.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 80415 81362 . - . ID=gene-AD08_RS00860;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=AD08_RS00860;old_locus_tag=AD08_4644 NZ_JHDJ01000195.1 Protein Homology CDS 80415 81362 . - 0 ID=cds-WP_032219442.1;Parent=gene-AD08_RS00860;Dbxref=Genbank:WP_032219442.1;Name=WP_032219442.1;gbkey=CDS;gene=treR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418662.1;locus_tag=AD08_RS00860;product=HTH-type transcriptional regulator TreR;protein_id=WP_032219442.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 81547 81600 . + . ID=gene-AD08_RS31425;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=AD08_RS31425 NZ_JHDJ01000195.1 Protein Homology CDS 81547 81600 . + 0 ID=cds-WP_001387276.1;Parent=gene-AD08_RS31425;Dbxref=Genbank:WP_001387276.1;Name=WP_001387276.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003933616.1;locus_tag=AD08_RS31425;product=mgtA regulatory leader peptide MgtL;protein_id=WP_001387276.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 81741 84437 . + . ID=gene-AD08_RS00855;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=AD08_RS00855;old_locus_tag=AD08_4645 NZ_JHDJ01000195.1 Protein Homology CDS 81741 84437 . + 0 ID=cds-WP_000471889.1;Parent=gene-AD08_RS00855;Dbxref=Genbank:WP_000471889.1;Name=WP_000471889.1;gbkey=CDS;gene=mgtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313246.1;locus_tag=AD08_RS00855;product=magnesium-translocating P-type ATPase;protein_id=WP_000471889.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 84643 85029 . - . ID=gene-AD08_RS00850;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=AD08_RS00850;old_locus_tag=AD08_4646 NZ_JHDJ01000195.1 Protein Homology CDS 84643 85029 . - 0 ID=cds-WP_000047539.1;Parent=gene-AD08_RS00850;Dbxref=Genbank:WP_000047539.1;Name=WP_000047539.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418664.2;locus_tag=AD08_RS00850;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047539.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 85102 85563 . - . ID=gene-AD08_RS00845;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=AD08_RS00845;old_locus_tag=AD08_4647 NZ_JHDJ01000195.1 Protein Homology CDS 85102 85563 . - 0 ID=cds-WP_000148581.1;Parent=gene-AD08_RS00845;Dbxref=Genbank:WP_000148581.1;Name=WP_000148581.1;gbkey=CDS;gene=pyrI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=AD08_RS00845;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148581.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 85576 86511 . - . ID=gene-AD08_RS00840;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=AD08_RS00840;old_locus_tag=AD08_4648 NZ_JHDJ01000195.1 Protein Homology CDS 85576 86511 . - 0 ID=cds-WP_000013046.1;Parent=gene-AD08_RS00840;Dbxref=Genbank:WP_000013046.1;Name=WP_000013046.1;gbkey=CDS;gene=pyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313249.1;locus_tag=AD08_RS00840;product=aspartate carbamoyltransferase;protein_id=WP_000013046.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 86515 86649 . - . ID=gene-AD08_RS0127140;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=AD08_RS0127140 NZ_JHDJ01000195.1 Protein Homology CDS 86515 86649 . - 0 ID=cds-WP_001296693.1;Parent=gene-AD08_RS0127140;Dbxref=Genbank:WP_001296693.1;Name=WP_001296693.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=AD08_RS0127140;product=pyr operon leader peptide;protein_id=WP_001296693.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 86930 87325 . - . ID=gene-AD08_RS00835;Name=AD08_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00835;old_locus_tag=AD08_4650 NZ_JHDJ01000195.1 Protein Homology CDS 86930 87325 . - 0 ID=cds-WP_000230273.1;Parent=gene-AD08_RS00835;Dbxref=Genbank:WP_000230273.1;Name=WP_000230273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313252.1;locus_tag=AD08_RS00835;product=RidA family protein;protein_id=WP_000230273.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 87456 88169 . - . ID=gene-AD08_RS00830;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=AD08_RS00830;old_locus_tag=AD08_4651 NZ_JHDJ01000195.1 Protein Homology CDS 87456 88169 . - 0 ID=cds-WP_032219443.1;Parent=gene-AD08_RS00830;Dbxref=Genbank:WP_032219443.1;Name=WP_032219443.1;gbkey=CDS;gene=bdcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313253.1;locus_tag=AD08_RS00830;product=SDR family oxidoreductase;protein_id=WP_032219443.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 88240 88833 . + . ID=gene-AD08_RS00825;Name=AD08_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00825;old_locus_tag=AD08_4652 NZ_JHDJ01000195.1 Protein Homology CDS 88240 88833 . + 0 ID=cds-WP_000256681.1;Parent=gene-AD08_RS00825;Dbxref=Genbank:WP_000256681.1;Name=WP_000256681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709951.3;locus_tag=AD08_RS00825;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000256681.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 88978 89430 . + . ID=gene-AD08_RS00820;Name=AD08_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00820;old_locus_tag=AD08_4653 NZ_JHDJ01000195.1 Protein Homology CDS 88978 89430 . + 0 ID=cds-WP_000583470.1;Parent=gene-AD08_RS00820;Dbxref=Genbank:WP_000583470.1;Name=WP_000583470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313256.2;locus_tag=AD08_RS00820;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000583470.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 89553 91064 . + . ID=gene-AD08_RS00815;Name=AD08_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00815;old_locus_tag=AD08_4654 NZ_JHDJ01000195.1 Protein Homology CDS 89553 91064 . + 0 ID=cds-WP_001074121.1;Parent=gene-AD08_RS00815;Dbxref=Genbank:WP_001074121.1;Name=WP_001074121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619071.1;locus_tag=AD08_RS00815;product=hypothetical protein;protein_id=WP_001074121.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 91249 92262 . - . ID=gene-AD08_RS00810;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=AD08_RS00810;old_locus_tag=AD08_4655 NZ_JHDJ01000195.1 Protein Homology CDS 91249 92262 . - 0 ID=cds-WP_000012897.1;Parent=gene-AD08_RS00810;Dbxref=Genbank:WP_000012897.1;Name=WP_000012897.1;gbkey=CDS;gene=argF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709947.1;locus_tag=AD08_RS00810;product=ornithine carbamoyltransferase;protein_id=WP_000012897.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 92424 92840 . + . ID=gene-AD08_RS00805;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=AD08_RS00805;old_locus_tag=AD08_4656 NZ_JHDJ01000195.1 Protein Homology CDS 92424 92840 . + 0 ID=cds-WP_000002953.1;Parent=gene-AD08_RS00805;Dbxref=Genbank:WP_000002953.1;Name=WP_000002953.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313259.1;locus_tag=AD08_RS00805;product=ribonuclease E inhibitor RraB;protein_id=WP_000002953.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 92886 93389 . - . ID=gene-AD08_RS00800;Name=AD08_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00800;old_locus_tag=AD08_4657 NZ_JHDJ01000195.1 Protein Homology CDS 92886 93389 . - 0 ID=cds-WP_001059398.1;Parent=gene-AD08_RS00800;Dbxref=Genbank:WP_001059398.1;Name=WP_001059398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026287.1;locus_tag=AD08_RS00800;product=GNAT family N-acetyltransferase;protein_id=WP_001059398.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq pseudogene 93582 94778 . + . ID=gene-AD08_RS31430;Name=AD08_RS31430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31430;pseudo=true NZ_JHDJ01000195.1 Protein Homology CDS 93582 94778 . + 0 ID=cds-AD08_RS31430;Parent=gene-AD08_RS31430;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313261.1;locus_tag=AD08_RS31430;product=DUF898 domain-containing protein;pseudo=true;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 94832 97687 . - . ID=gene-AD08_RS00795;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=AD08_RS00795;old_locus_tag=AD08_4660 NZ_JHDJ01000195.1 Protein Homology CDS 94832 97687 . - 0 ID=cds-WP_000416407.1;Parent=gene-AD08_RS00795;Dbxref=Genbank:WP_000416407.1;Name=WP_000416407.1;gbkey=CDS;gene=valS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=AD08_RS00795;product=valine--tRNA ligase;protein_id=WP_000416407.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 97687 98130 . - . ID=gene-AD08_RS00790;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=AD08_RS00790;old_locus_tag=AD08_4661 NZ_JHDJ01000195.1 Protein Homology CDS 97687 98130 . - 0 ID=cds-WP_000786398.1;Parent=gene-AD08_RS00790;Dbxref=Genbank:WP_000786398.1;Name=WP_000786398.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=AD08_RS00790;product=DNA polymerase III subunit chi;protein_id=WP_000786398.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 98292 99803 . - . ID=gene-AD08_RS00785;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=AD08_RS00785;old_locus_tag=AD08_4662 NZ_JHDJ01000195.1 Protein Homology CDS 98292 99803 . - 0 ID=cds-WP_001426637.1;Parent=gene-AD08_RS00785;Dbxref=Genbank:WP_001426637.1;Name=WP_001426637.1;gbkey=CDS;gene=pepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313264.1;locus_tag=AD08_RS00785;product=leucyl aminopeptidase;protein_id=WP_001426637.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 100070 101170 . + . ID=gene-AD08_RS00780;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=AD08_RS00780;old_locus_tag=AD08_4664 NZ_JHDJ01000195.1 Protein Homology CDS 100070 101170 . + 0 ID=cds-WP_000584109.1;Parent=gene-AD08_RS00780;Dbxref=Genbank:WP_000584109.1;Name=WP_000584109.1;gbkey=CDS;gene=lptF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313265.1;locus_tag=AD08_RS00780;product=LPS export ABC transporter permease LptF;protein_id=WP_000584109.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 101170 102252 . + . ID=gene-AD08_RS00775;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=AD08_RS00775;old_locus_tag=AD08_4665 NZ_JHDJ01000195.1 Protein Homology CDS 101170 102252 . + 0 ID=cds-WP_001295681.1;Parent=gene-AD08_RS00775;Dbxref=Genbank:WP_001295681.1;Name=WP_001295681.1;gbkey=CDS;gene=lptG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313266.2;locus_tag=AD08_RS00775;product=LPS export ABC transporter permease LptG;protein_id=WP_001295681.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 102371 103873 . - . ID=gene-AD08_RS00770;Name=AD08_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00770;old_locus_tag=AD08_4666 NZ_JHDJ01000195.1 Protein Homology CDS 102371 103873 . - 0 ID=cds-WP_001332879.1;Parent=gene-AD08_RS00770;Dbxref=Genbank:WP_001332879.1;Name=WP_001332879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313267.1;locus_tag=AD08_RS00770;product=DUF853 domain-containing protein;protein_id=WP_001332879.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 104003 105022 . - . ID=gene-AD08_RS00765;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=AD08_RS00765;old_locus_tag=AD08_4667 NZ_JHDJ01000195.1 Protein Homology CDS 104003 105022 . - 0 ID=cds-WP_000061768.1;Parent=gene-AD08_RS00765;Dbxref=Genbank:WP_000061768.1;Name=WP_000061768.1;gbkey=CDS;gene=ahr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418690.4;locus_tag=AD08_RS00765;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_000061768.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 105218 105302 . + . ID=gene-AD08_RS00760;Name=AD08_RS00760;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS00760;old_locus_tag=AD08_4669 NZ_JHDJ01000195.1 tRNAscan-SE tRNA 105218 105302 . + . ID=rna-AD08_RS00760;Parent=gene-AD08_RS00760;anticodon=(pos:105252..105254);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS00760;product=tRNA-Leu NZ_JHDJ01000195.1 tRNAscan-SE exon 105218 105302 . + . ID=exon-AD08_RS00760-1;Parent=rna-AD08_RS00760;anticodon=(pos:105252..105254);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS00760;product=tRNA-Leu NZ_JHDJ01000195.1 RefSeq gene 105393 107303 . + . ID=gene-AD08_RS00755;Name=AD08_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00755;old_locus_tag=AD08_4670 NZ_JHDJ01000195.1 Protein Homology CDS 105393 107303 . + 0 ID=cds-WP_000083138.1;Parent=gene-AD08_RS00755;Dbxref=Genbank:WP_000083138.1;Name=WP_000083138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313269.1;locus_tag=AD08_RS00755;product=site-specific integrase;protein_id=WP_000083138.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 107436 107768 . - . ID=gene-AD08_RS00750;Name=AD08_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00750;old_locus_tag=AD08_4671 NZ_JHDJ01000195.1 Protein Homology CDS 107436 107768 . - 0 ID=cds-WP_001261095.1;Parent=gene-AD08_RS00750;Dbxref=Genbank:WP_001261095.1;Name=WP_001261095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313273.1;locus_tag=AD08_RS00750;product=NIPSNAP family protein;protein_id=WP_001261095.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 108774 109103 . - . ID=gene-AD08_RS29935;Name=AD08_RS29935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS29935 NZ_JHDJ01000195.1 Protein Homology CDS 108774 109103 . - 0 ID=cds-WP_000085626.1;Parent=gene-AD08_RS29935;Dbxref=Genbank:WP_000085626.1;Name=WP_000085626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000085626.1;locus_tag=AD08_RS29935;product=DUF1643 domain-containing protein;protein_id=WP_000085626.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 109433 109993 . + . ID=gene-AD08_RS00745;Name=AD08_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00745;old_locus_tag=AD08_4673 NZ_JHDJ01000195.1 Protein Homology CDS 109433 109993 . + 0 ID=cds-WP_000190110.1;Parent=gene-AD08_RS00745;Dbxref=Genbank:WP_000190110.1;Name=WP_000190110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403343.1;locus_tag=AD08_RS00745;product=recombinase family protein;protein_id=WP_000190110.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 110007 110852 . + . ID=gene-AD08_RS00740;Name=AD08_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00740;old_locus_tag=AD08_4674 NZ_JHDJ01000195.1 Protein Homology CDS 110007 110852 . + 0 ID=cds-WP_000331917.1;Parent=gene-AD08_RS00740;Dbxref=Genbank:WP_000331917.1;Name=WP_000331917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331918.1;locus_tag=AD08_RS00740;product=hypothetical protein;protein_id=WP_000331917.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 110913 111407 . - . ID=gene-AD08_RS00735;Name=AD08_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00735;old_locus_tag=AD08_4675 NZ_JHDJ01000195.1 Protein Homology CDS 110913 111407 . - 0 ID=cds-WP_000145203.1;Parent=gene-AD08_RS00735;Dbxref=Genbank:WP_000145203.1;Name=WP_000145203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001691323.1;locus_tag=AD08_RS00735;product=membrane protein;protein_id=WP_000145203.1;transl_table=11 NZ_JHDJ01000195.1 RefSeq pseudogene 111648 111851 . + . ID=gene-AD08_RS00730;Name=AD08_RS00730;end_range=111851,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS00730;old_locus_tag=AD08_4676;partial=true;pseudo=true NZ_JHDJ01000195.1 Protein Homology CDS 111648 111851 . + 0 ID=cds-AD08_RS00730;Parent=gene-AD08_RS00730;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=111851,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001440809.1;locus_tag=AD08_RS00730;partial=true;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 NZ_JHDJ01000195.1 RefSeq gene 111908 112348 . - . ID=gene-AD08_RS00725;Name=AD08_RS00725;end_range=112348,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00725;old_locus_tag=AD08_4677;partial=true NZ_JHDJ01000195.1 Protein Homology CDS 111908 112348 . - 0 ID=cds-WP_074526708.1;Parent=gene-AD08_RS00725;Dbxref=Genbank:WP_074526708.1;Name=WP_074526708.1;end_range=112348,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS00725;partial=true;product=IS3 family transposase;protein_id=WP_074526708.1;transl_table=11 ##sequence-region NZ_JHDJ01000196.1 1 52817 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000196.1 RefSeq region 1 52817 . + . ID=NZ_JHDJ01000196.1:1..52817;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000196.1 RefSeq gene 1 307 . - . ID=gene-AD08_RS00720;Name=AD08_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00720;old_locus_tag=AD08_4678;partial=true;start_range=.,1 NZ_JHDJ01000196.1 Protein Homology CDS 1 307 . - 0 ID=cds-WP_032219445.1;Parent=gene-AD08_RS00720;Dbxref=Genbank:WP_032219445.1;Name=WP_032219445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS00720;partial=true;product=transposase;protein_id=WP_032219445.1;start_range=.,1;transl_table=11 NZ_JHDJ01000196.1 RefSeq pseudogene 363 596 . - . ID=gene-AD08_RS0127170;Name=AD08_RS0127170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0127170;partial=true;pseudo=true;start_range=.,363 NZ_JHDJ01000196.1 Protein Homology CDS 363 596 . - 0 ID=cds-AD08_RS0127170;Parent=gene-AD08_RS0127170;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001298859.1;locus_tag=AD08_RS0127170;partial=true;product=sigma-70 family RNA polymerase sigma factor;pseudo=true;start_range=.,363;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 839 1207 . + . ID=gene-AD08_RS0127175;Name=AD08_RS0127175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0127175 NZ_JHDJ01000196.1 Protein Homology CDS 839 1207 . + 0 ID=cds-WP_001295723.1;Parent=gene-AD08_RS0127175;Dbxref=Genbank:WP_001295723.1;Name=WP_001295723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416508.1;locus_tag=AD08_RS0127175;product=antitoxin;protein_id=WP_001295723.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq pseudogene 1297 1395 . + . ID=gene-AD08_RS29945;Name=AD08_RS29945;end_range=1395,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS29945;partial=true;pseudo=true NZ_JHDJ01000196.1 Protein Homology CDS 1297 1395 . + 0 ID=cds-AD08_RS29945;Parent=gene-AD08_RS29945;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1395,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309433.1;locus_tag=AD08_RS29945;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 2135 3394 . + . ID=gene-AD08_RS00715;Name=AD08_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00715;old_locus_tag=AD08_4680 NZ_JHDJ01000196.1 Protein Homology CDS 2135 3394 . + 0 ID=cds-WP_032219447.1;Parent=gene-AD08_RS00715;Dbxref=Genbank:WP_032219447.1;Name=WP_032219447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000132329.1;locus_tag=AD08_RS00715;product=S-methyl-5-thioribose kinase;protein_id=WP_032219447.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 3404 4519 . + . ID=gene-AD08_RS00710;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=AD08_RS00710;old_locus_tag=AD08_4681 NZ_JHDJ01000196.1 Protein Homology CDS 3404 4519 . + 0 ID=cds-WP_001022014.1;Parent=gene-AD08_RS00710;Dbxref=Genbank:WP_001022014.1;Name=WP_001022014.1;gbkey=CDS;gene=mtnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001022014.1;locus_tag=AD08_RS00710;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=WP_001022014.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 4550 5191 . + . ID=gene-AD08_RS00705;Name=AD08_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00705;old_locus_tag=AD08_4682 NZ_JHDJ01000196.1 Protein Homology CDS 4550 5191 . + 0 ID=cds-WP_000439687.1;Parent=gene-AD08_RS00705;Dbxref=Genbank:WP_000439687.1;Name=WP_000439687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000439687.1;locus_tag=AD08_RS00705;product=L-fuculose-phosphate aldolase;protein_id=WP_000439687.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 5295 6299 . + . ID=gene-AD08_RS00700;Name=AD08_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00700;old_locus_tag=AD08_4683 NZ_JHDJ01000196.1 Protein Homology CDS 5295 6299 . + 0 ID=cds-WP_000471147.1;Parent=gene-AD08_RS00700;Dbxref=Genbank:WP_000471147.1;Name=WP_000471147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001622580.1;locus_tag=AD08_RS00700;product=multidrug DMT transporter permease;protein_id=WP_000471147.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 6340 7326 . - . ID=gene-AD08_RS00695;Name=AD08_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00695;old_locus_tag=AD08_4684 NZ_JHDJ01000196.1 Protein Homology CDS 6340 7326 . - 0 ID=cds-WP_000373366.1;Parent=gene-AD08_RS00695;Dbxref=Genbank:WP_000373366.1;Name=WP_000373366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418715.2;locus_tag=AD08_RS00695;product=sugar-binding transcriptional regulator;protein_id=WP_000373366.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 7673 9022 . - . ID=gene-AD08_RS00690;Name=AD08_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00690;old_locus_tag=AD08_4686 NZ_JHDJ01000196.1 Protein Homology CDS 7673 9022 . - 0 ID=cds-WP_032178139.1;Parent=gene-AD08_RS00690;Dbxref=Genbank:WP_032178139.1;Name=WP_032178139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418716.1;locus_tag=AD08_RS00690;product=GntP family permease;protein_id=WP_032178139.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 9129 11096 . - . ID=gene-AD08_RS00685;Name=AD08_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00685;old_locus_tag=AD08_4687 NZ_JHDJ01000196.1 Protein Homology CDS 9129 11096 . - 0 ID=cds-WP_000116326.1;Parent=gene-AD08_RS00685;Dbxref=Genbank:WP_000116326.1;Name=WP_000116326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418717.1;locus_tag=AD08_RS00685;product=xylonate dehydratase YjhG;protein_id=WP_000116326.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 11107 12012 . - . ID=gene-AD08_RS00680;Name=AD08_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00680;old_locus_tag=AD08_4688 NZ_JHDJ01000196.1 Protein Homology CDS 11107 12012 . - 0 ID=cds-WP_000714563.1;Parent=gene-AD08_RS00680;Dbxref=Genbank:WP_000714563.1;Name=WP_000714563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418718.4;locus_tag=AD08_RS00680;product=dihydrodipicolinate synthase family protein;protein_id=WP_000714563.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 12017 12805 . - . ID=gene-AD08_RS00675;Name=AD08_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00675;old_locus_tag=AD08_4689 NZ_JHDJ01000196.1 Protein Homology CDS 12017 12805 . - 0 ID=cds-WP_000251798.1;Parent=gene-AD08_RS00675;Dbxref=Genbank:WP_000251798.1;Name=WP_000251798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418719.1;locus_tag=AD08_RS00675;product=IclR family transcriptional regulator;protein_id=WP_000251798.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 13108 13890 . - . ID=gene-AD08_RS00670;Name=AD08_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00670;old_locus_tag=AD08_4690 NZ_JHDJ01000196.1 Protein Homology CDS 13108 13890 . - 0 ID=cds-WP_000082780.1;Parent=gene-AD08_RS00670;Dbxref=Genbank:WP_000082780.1;Name=WP_000082780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418720.1;locus_tag=AD08_RS00670;product=DeoR/GlpR transcriptional regulator;protein_id=WP_000082780.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 13907 14539 . - . ID=gene-AD08_RS00665;Name=AD08_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00665;old_locus_tag=AD08_4691 NZ_JHDJ01000196.1 Protein Homology CDS 13907 14539 . - 0 ID=cds-WP_000600622.1;Parent=gene-AD08_RS00665;Dbxref=Genbank:WP_000600622.1;Name=WP_000600622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418721.1;locus_tag=AD08_RS00665;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_000600622.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 14551 14982 . - . ID=gene-AD08_RS00660;Name=AD08_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00660;old_locus_tag=AD08_4692 NZ_JHDJ01000196.1 Protein Homology CDS 14551 14982 . - 0 ID=cds-WP_000606406.1;Parent=gene-AD08_RS00660;Dbxref=Genbank:WP_000606406.1;Name=WP_000606406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418722.1;locus_tag=AD08_RS00660;product=PTS sugar transporter subunit IIA;protein_id=WP_000606406.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 15113 15919 . - . ID=gene-AD08_RS00655;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=AD08_RS00655;old_locus_tag=AD08_4693 NZ_JHDJ01000196.1 Protein Homology CDS 15113 15919 . - 0 ID=cds-WP_000118626.1;Parent=gene-AD08_RS00655;Dbxref=Genbank:WP_000118626.1;Name=WP_000118626.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418723.1;locus_tag=AD08_RS00655;product=BtpA family protein SgcQ;protein_id=WP_000118626.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 15932 17245 . - . ID=gene-AD08_RS00650;Name=AD08_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00650;old_locus_tag=AD08_4694 NZ_JHDJ01000196.1 Protein Homology CDS 15932 17245 . - 0 ID=cds-WP_032171615.1;Parent=gene-AD08_RS00650;Dbxref=Genbank:WP_032171615.1;Name=WP_032171615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418724.1;locus_tag=AD08_RS00650;product=permease;protein_id=WP_032171615.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 17257 17535 . - . ID=gene-AD08_RS00645;Name=AD08_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00645;old_locus_tag=AD08_4695 NZ_JHDJ01000196.1 Protein Homology CDS 17257 17535 . - 0 ID=cds-WP_000722973.1;Parent=gene-AD08_RS00645;Dbxref=Genbank:WP_000722973.1;Name=WP_000722973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588476.1;locus_tag=AD08_RS00645;product=PTS sugar transporter subunit IIB;protein_id=WP_000722973.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 17532 18653 . - . ID=gene-AD08_RS00640;Name=AD08_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00640;old_locus_tag=AD08_4696 NZ_JHDJ01000196.1 Protein Homology CDS 17532 18653 . - 0 ID=cds-WP_032219448.1;Parent=gene-AD08_RS00640;Dbxref=Genbank:WP_032219448.1;Name=WP_032219448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418725.4;locus_tag=AD08_RS00640;product=M42 family metallopeptidase;protein_id=WP_032219448.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq pseudogene 19052 19270 . - . ID=gene-AD08_RS30855;Name=AD08_RS30855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS30855;pseudo=true NZ_JHDJ01000196.1 Protein Homology CDS 19052 19270 . - 0 ID=cds-AD08_RS30855;Parent=gene-AD08_RS30855;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001348444.1;locus_tag=AD08_RS30855;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 19439 20185 . - . ID=gene-AD08_RS00635;Name=AD08_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00635;old_locus_tag=AD08_4697 NZ_JHDJ01000196.1 Protein Homology CDS 19439 20185 . - 0 ID=cds-WP_000354251.1;Parent=gene-AD08_RS00635;Dbxref=Genbank:WP_000354251.1;Name=WP_000354251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418726.1;locus_tag=AD08_RS00635;product=class I SAM-dependent methyltransferase;protein_id=WP_000354251.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 20241 20786 . - . ID=gene-AD08_RS00630;Name=AD08_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00630;old_locus_tag=AD08_4698 NZ_JHDJ01000196.1 Protein Homology CDS 20241 20786 . - 0 ID=cds-WP_032219449.1;Parent=gene-AD08_RS00630;Dbxref=Genbank:WP_032219449.1;Name=WP_032219449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418727.1;locus_tag=AD08_RS00630;product=N-acetyltransferase;protein_id=WP_032219449.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 20798 21055 . - . ID=gene-AD08_RS00625;Name=AD08_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00625;old_locus_tag=AD08_4699 NZ_JHDJ01000196.1 Protein Homology CDS 20798 21055 . - 0 ID=cds-WP_001054376.1;Parent=gene-AD08_RS00625;Dbxref=Genbank:WP_001054376.1;Name=WP_001054376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588477.1;locus_tag=AD08_RS00625;product=hypothetical protein;protein_id=WP_001054376.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq pseudogene 21432 21677 . - . ID=gene-AD08_RS31440;Name=AD08_RS31440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS31440;pseudo=true NZ_JHDJ01000196.1 Protein Homology CDS 21432 21677 . - 0 ID=cds-AD08_RS31440;Parent=gene-AD08_RS31440;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001420158.1;locus_tag=AD08_RS31440;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 22047 23033 . + . ID=gene-AD08_RS0127190;Name=AD08_RS0127190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0127190 NZ_JHDJ01000196.1 Protein Homology CDS 22047 23033 . + 0 ID=cds-WP_001323209.1;Parent=gene-AD08_RS0127190;Dbxref=Genbank:WP_001323209.1;Name=WP_001323209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001446445.1;locus_tag=AD08_RS0127190;product=hypothetical protein;protein_id=WP_001323209.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 23616 24596 . - . ID=gene-AD08_RS00610;Name=AD08_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00610;old_locus_tag=AD08_4704 NZ_JHDJ01000196.1 Protein Homology CDS 23616 24596 . - 0 ID=cds-WP_000991455.1;Parent=gene-AD08_RS00610;Dbxref=Genbank:WP_000991455.1;Name=WP_000991455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709926.3;locus_tag=AD08_RS00610;product=9-O-acetyl-N-acetylneuraminic acid deacetylase;protein_id=WP_000991455.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 24661 25767 . - . ID=gene-AD08_RS00605;Name=AD08_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00605;old_locus_tag=AD08_4705 NZ_JHDJ01000196.1 Protein Homology CDS 24661 25767 . - 0 ID=cds-WP_001299704.1;Parent=gene-AD08_RS00605;Dbxref=Genbank:WP_001299704.1;Name=WP_001299704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418730.4;locus_tag=AD08_RS00605;product=N-acetylneuraminate epimerase;protein_id=WP_001299704.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 25787 26503 . - . ID=gene-AD08_RS00600;Name=nanC;gbkey=Gene;gene=nanC;gene_biotype=protein_coding;locus_tag=AD08_RS00600;old_locus_tag=AD08_4706 NZ_JHDJ01000196.1 Protein Homology CDS 25787 26503 . - 0 ID=cds-WP_001295734.1;Parent=gene-AD08_RS00600;Dbxref=Genbank:WP_001295734.1;Name=WP_001295734.1;gbkey=CDS;gene=nanC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313297.2;locus_tag=AD08_RS00600;product=N-acetylneuraminic acid outer membrane channel NanC;protein_id=WP_001295734.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 27956 28558 . + . ID=gene-AD08_RS00595;Name=fimB;gbkey=Gene;gene=fimB;gene_biotype=protein_coding;locus_tag=AD08_RS00595;old_locus_tag=AD08_4708 NZ_JHDJ01000196.1 Protein Homology CDS 27956 28558 . + 0 ID=cds-WP_000790583.1;Parent=gene-AD08_RS00595;Dbxref=Genbank:WP_000790583.1;Name=WP_000790583.1;gbkey=CDS;gene=fimB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313298.1;locus_tag=AD08_RS00595;product=type 1 fimbria regulatory protein FimB;protein_id=WP_000790583.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 29035 29631 . + . ID=gene-AD08_RS00590;Name=fimE;gbkey=Gene;gene=fimE;gene_biotype=protein_coding;locus_tag=AD08_RS00590;old_locus_tag=AD08_4709 NZ_JHDJ01000196.1 Protein Homology CDS 29035 29631 . + 0 ID=cds-WP_000044711.1;Parent=gene-AD08_RS00590;Dbxref=Genbank:WP_000044711.1;Name=WP_000044711.1;gbkey=CDS;gene=fimE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418733.1;locus_tag=AD08_RS00590;product=type 1 fimbria regulatory protein FimE;protein_id=WP_000044711.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 30112 30666 . + . ID=gene-AD08_RS00585;Name=AD08_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00585;old_locus_tag=AD08_4710 NZ_JHDJ01000196.1 Protein Homology CDS 30112 30666 . + 0 ID=cds-WP_000695589.1;Parent=gene-AD08_RS00585;Dbxref=Genbank:WP_000695589.1;Name=WP_000695589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709921.1;locus_tag=AD08_RS00585;product=fimbrial protein;protein_id=WP_000695589.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 30731 31270 . + . ID=gene-AD08_RS00580;Name=AD08_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00580;old_locus_tag=AD08_4711 NZ_JHDJ01000196.1 Protein Homology CDS 30731 31270 . + 0 ID=cds-WP_032254606.1;Parent=gene-AD08_RS00580;Dbxref=Genbank:WP_032254606.1;Name=WP_032254606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418735.2;locus_tag=AD08_RS00580;product=type 1 fimbrial protein;protein_id=WP_032254606.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 31307 32032 . + . ID=gene-AD08_RS00575;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=AD08_RS00575;old_locus_tag=AD08_4712 NZ_JHDJ01000196.1 Protein Homology CDS 31307 32032 . + 0 ID=cds-WP_032219451.1;Parent=gene-AD08_RS00575;Dbxref=Genbank:WP_032219451.1;Name=WP_032219451.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418736.3;locus_tag=AD08_RS00575;product=type 1 fimbria chaperone FimC;protein_id=WP_032219451.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 32099 34735 . + . ID=gene-AD08_RS00570;Name=fimD;gbkey=Gene;gene=fimD;gene_biotype=protein_coding;locus_tag=AD08_RS00570;old_locus_tag=AD08_4713 NZ_JHDJ01000196.1 Protein Homology CDS 32099 34735 . + 0 ID=cds-WP_000120948.1;Parent=gene-AD08_RS00570;Dbxref=Genbank:WP_000120948.1;Name=WP_000120948.1;gbkey=CDS;gene=fimD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313303.1;locus_tag=AD08_RS00570;product=fimbrial biogenesis usher protein FimD;protein_id=WP_000120948.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 34745 35275 . + . ID=gene-AD08_RS00565;Name=fimF;gbkey=Gene;gene=fimF;gene_biotype=protein_coding;locus_tag=AD08_RS00565;old_locus_tag=AD08_4714 NZ_JHDJ01000196.1 Protein Homology CDS 34745 35275 . + 0 ID=cds-WP_001244823.1;Parent=gene-AD08_RS00565;Dbxref=Genbank:WP_001244823.1;Name=WP_001244823.1;gbkey=CDS;gene=fimF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313304.1;locus_tag=AD08_RS00565;product=type 1 fimbria minor subunit FimF;protein_id=WP_001244823.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 35288 35791 . + . ID=gene-AD08_RS00560;Name=fimG;gbkey=Gene;gene=fimG;gene_biotype=protein_coding;locus_tag=AD08_RS00560;old_locus_tag=AD08_4715 NZ_JHDJ01000196.1 Protein Homology CDS 35288 35791 . + 0 ID=cds-WP_032219452.1;Parent=gene-AD08_RS00560;Dbxref=Genbank:WP_032219452.1;Name=WP_032219452.1;gbkey=CDS;gene=fimG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418739.1;locus_tag=AD08_RS00560;product=type 1 fimbria minor subunit FimG;protein_id=WP_032219452.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 35811 36713 . + . ID=gene-AD08_RS00555;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=AD08_RS00555;old_locus_tag=AD08_4716 NZ_JHDJ01000196.1 Protein Homology CDS 35811 36713 . + 0 ID=cds-WP_001338195.1;Parent=gene-AD08_RS00555;Dbxref=Genbank:WP_001338195.1;Name=WP_001338195.1;gbkey=CDS;gene=fimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313306.1;locus_tag=AD08_RS00555;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_001338195.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 36886 38229 . - . ID=gene-AD08_RS00550;Name=gntP;gbkey=Gene;gene=gntP;gene_biotype=protein_coding;locus_tag=AD08_RS00550;old_locus_tag=AD08_4717 NZ_JHDJ01000196.1 Protein Homology CDS 36886 38229 . - 0 ID=cds-WP_000558251.1;Parent=gene-AD08_RS00550;Dbxref=Genbank:WP_000558251.1;Name=WP_000558251.1;gbkey=CDS;gene=gntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313307.1;locus_tag=AD08_RS00550;product=gluconate permease GntP;protein_id=WP_000558251.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 38569 39753 . + . ID=gene-AD08_RS00545;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=AD08_RS00545;old_locus_tag=AD08_4719 NZ_JHDJ01000196.1 Protein Homology CDS 38569 39753 . + 0 ID=cds-WP_000438582.1;Parent=gene-AD08_RS00545;Dbxref=Genbank:WP_000438582.1;Name=WP_000438582.1;gbkey=CDS;gene=uxuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709912.2;locus_tag=AD08_RS00545;product=mannonate dehydratase;protein_id=WP_000438582.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 39834 41294 . + . ID=gene-AD08_RS00540;Name=AD08_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00540;old_locus_tag=AD08_4720 NZ_JHDJ01000196.1 Protein Homology CDS 39834 41294 . + 0 ID=cds-WP_000208210.1;Parent=gene-AD08_RS00540;Dbxref=Genbank:WP_000208210.1;Name=WP_000208210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313309.1;locus_tag=AD08_RS00540;product=fructuronate reductase;protein_id=WP_000208210.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 41509 42282 . + . ID=gene-AD08_RS00535;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=AD08_RS00535;old_locus_tag=AD08_4721 NZ_JHDJ01000196.1 Protein Homology CDS 41509 42282 . + 0 ID=cds-WP_032219453.1;Parent=gene-AD08_RS00535;Dbxref=Genbank:WP_032219453.1;Name=WP_032219453.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418744.1;locus_tag=AD08_RS00535;product=Uxu operon transcriptional regulator;protein_id=WP_032219453.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 42423 43253 . - . ID=gene-AD08_RS00530;Name=AD08_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00530;old_locus_tag=AD08_4722 NZ_JHDJ01000196.1 Protein Homology CDS 42423 43253 . - 0 ID=cds-WP_001299708.1;Parent=gene-AD08_RS00530;Dbxref=Genbank:WP_001299708.1;Name=WP_001299708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313311.3;locus_tag=AD08_RS00530;product=DUF2686 family protein;protein_id=WP_001299708.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 43844 43927 . + . ID=gene-AD08_RS31840;Name=AD08_RS31840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31840 NZ_JHDJ01000196.1 Protein Homology CDS 43844 43927 . + 0 ID=cds-WP_120795393.1;Parent=gene-AD08_RS31840;Dbxref=Genbank:WP_120795393.1;Name=WP_120795393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518832.1;locus_tag=AD08_RS31840;product=iraD leader peptide;protein_id=WP_120795393.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 43924 44316 . + . ID=gene-AD08_RS00520;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=AD08_RS00520;old_locus_tag=AD08_4725 NZ_JHDJ01000196.1 Protein Homology CDS 43924 44316 . + 0 ID=cds-WP_001297236.1;Parent=gene-AD08_RS00520;Dbxref=Genbank:WP_001297236.1;Name=WP_001297236.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418746.4;locus_tag=AD08_RS00520;product=anti-adapter protein IraD;protein_id=WP_001297236.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 44309 45220 . - . ID=gene-AD08_RS00515;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=AD08_RS00515;old_locus_tag=AD08_4726 NZ_JHDJ01000196.1 Protein Homology CDS 44309 45220 . - 0 ID=cds-WP_000340758.1;Parent=gene-AD08_RS00515;Dbxref=Genbank:WP_000340758.1;Name=WP_000340758.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418747.1;locus_tag=AD08_RS00515;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000340758.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 45285 46457 . - . ID=gene-AD08_RS00510;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=AD08_RS00510;old_locus_tag=AD08_4727 NZ_JHDJ01000196.1 Protein Homology CDS 45285 46457 . - 0 ID=cds-WP_032219454.1;Parent=gene-AD08_RS00510;Dbxref=Genbank:WP_032219454.1;Name=WP_032219454.1;gbkey=CDS;gene=iadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313313.1;locus_tag=AD08_RS00510;product=beta-aspartyl-peptidase;protein_id=WP_032219454.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 46470 46931 . - . ID=gene-AD08_RS00505;Name=AD08_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00505;old_locus_tag=AD08_4728 NZ_JHDJ01000196.1 Protein Homology CDS 46470 46931 . - 0 ID=cds-WP_000211971.1;Parent=gene-AD08_RS00505;Dbxref=Genbank:WP_000211971.1;Name=WP_000211971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313314.1;locus_tag=AD08_RS00505;product=hypothetical protein;protein_id=WP_000211971.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 46928 47611 . - . ID=gene-AD08_RS00500;Name=AD08_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00500;old_locus_tag=AD08_4729 NZ_JHDJ01000196.1 Protein Homology CDS 46928 47611 . - 0 ID=cds-WP_001295597.1;Parent=gene-AD08_RS00500;Dbxref=Genbank:WP_001295597.1;Name=WP_001295597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=AD08_RS00500;product=nucleoside recognition pore and gate family inner membrane transporter;protein_id=WP_001295597.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq gene 47861 48445 . + . ID=gene-AD08_RS00495;Name=kptA;gbkey=Gene;gene=kptA;gene_biotype=protein_coding;locus_tag=AD08_RS00495;old_locus_tag=AD08_4731 NZ_JHDJ01000196.1 Protein Homology CDS 47861 48445 . + 0 ID=cds-WP_032219455.1;Parent=gene-AD08_RS00495;Dbxref=Genbank:WP_032219455.1;Name=WP_032219455.1;gbkey=CDS;gene=kptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418751.4;locus_tag=AD08_RS00495;product=RNA 2'-phosphotransferase;protein_id=WP_032219455.1;transl_table=11 NZ_JHDJ01000196.1 RefSeq pseudogene 48566 52270 . - . ID=gene-AD08_RS00490;Name=AD08_RS00490;end_range=52270,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS00490;old_locus_tag=AD08_4732;partial=true;pseudo=true NZ_JHDJ01000196.1 Protein Homology CDS 48566 52270 . - 0 ID=cds-AD08_RS00490;Parent=gene-AD08_RS00490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=52270,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001596475.1;locus_tag=AD08_RS00490;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JHDJ01000196.1 RefSeq pseudogene 52327 52817 . + . ID=gene-AD08_RS00485;Name=AD08_RS00485;end_range=52817,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS00485;old_locus_tag=AD08_4733;partial=true;pseudo=true NZ_JHDJ01000196.1 Protein Homology CDS 52327 52817 . + 0 ID=cds-AD08_RS00485;Parent=gene-AD08_RS00485;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=52817,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS00485;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JHDJ01000196.1 cmsearch sequence_feature 52608 52724 . + . ID=id-AD08_RS00485;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=AD08_RS00485 ##sequence-region NZ_JHDJ01000197.1 1 33323 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000197.1 RefSeq region 1 33323 . + . ID=NZ_JHDJ01000197.1:1..33323;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000197.1 RefSeq gene 1 401 . + . ID=gene-AD08_RS0127220;Name=AD08_RS0127220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0127220;partial=true;start_range=.,1 NZ_JHDJ01000197.1 Protein Homology CDS 1 401 . + 2 ID=cds-WP_032219465.1;Parent=gene-AD08_RS0127220;Dbxref=Genbank:WP_032219465.1;Name=WP_032219465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD08_RS0127220;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_032219465.1;start_range=.,1;transl_table=11 NZ_JHDJ01000197.1 RefSeq pseudogene 445 1980 . - . ID=gene-AD08_RS00480;Name=AD08_RS00480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS00480;old_locus_tag=AD08_4735;partial=true;pseudo=true;start_range=.,445 NZ_JHDJ01000197.1 Protein Homology CDS 445 1980 . - 0 ID=cds-AD08_RS00480;Parent=gene-AD08_RS00480;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001596475.1;locus_tag=AD08_RS00480;partial=true;product=hypothetical protein;pseudo=true;start_range=.,445;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 2191 3369 . - . ID=gene-AD08_RS00475;Name=AD08_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00475;old_locus_tag=AD08_4736 NZ_JHDJ01000197.1 Protein Homology CDS 2191 3369 . - 0 ID=cds-WP_001089428.1;Parent=gene-AD08_RS00475;Dbxref=Genbank:WP_001089428.1;Name=WP_001089428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313320.1;locus_tag=AD08_RS00475;product=MFS transporter;protein_id=WP_001089428.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 3440 4279 . - . ID=gene-AD08_RS00470;Name=AD08_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00470;old_locus_tag=AD08_4737 NZ_JHDJ01000197.1 Protein Homology CDS 3440 4279 . - 0 ID=cds-WP_000746214.1;Parent=gene-AD08_RS00470;Dbxref=Genbank:WP_000746214.1;Name=WP_000746214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313321.3;locus_tag=AD08_RS00470;product=YjiK family protein;protein_id=WP_000746214.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 4536 6629 . - . ID=gene-AD08_RS00465;Name=AD08_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00465;old_locus_tag=AD08_4739 NZ_JHDJ01000197.1 Protein Homology CDS 4536 6629 . - 0 ID=cds-WP_032219457.1;Parent=gene-AD08_RS00465;Dbxref=Genbank:WP_032219457.1;Name=WP_032219457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313322.1;locus_tag=AD08_RS00465;product=pentapeptide repeat-containing protein;protein_id=WP_032219457.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 6941 7207 . - . ID=gene-AD08_RS00460;Name=AD08_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00460;old_locus_tag=AD08_4740 NZ_JHDJ01000197.1 Protein Homology CDS 6941 7207 . - 0 ID=cds-WP_000657678.1;Parent=gene-AD08_RS00460;Dbxref=Genbank:WP_000657678.1;Name=WP_000657678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313323.1;locus_tag=AD08_RS00460;product=DUF3343 domain-containing protein;protein_id=WP_000657678.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 7204 7971 . - . ID=gene-AD08_RS00455;Name=AD08_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00455;old_locus_tag=AD08_4741 NZ_JHDJ01000197.1 Protein Homology CDS 7204 7971 . - 0 ID=cds-WP_032219458.1;Parent=gene-AD08_RS00455;Dbxref=Genbank:WP_032219458.1;Name=WP_032219458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418754.2;locus_tag=AD08_RS00455;product=hypothetical protein;protein_id=WP_032219458.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 7981 9132 . - . ID=gene-AD08_RS00450;Name=AD08_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00450;old_locus_tag=AD08_4742 NZ_JHDJ01000197.1 Protein Homology CDS 7981 9132 . - 0 ID=cds-WP_001299707.1;Parent=gene-AD08_RS00450;Dbxref=Genbank:WP_001299707.1;Name=WP_001299707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418755.4;locus_tag=AD08_RS00450;product=2-hydroxyacyl-CoA dehydratase subunit D;protein_id=WP_001299707.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 9248 10528 . - . ID=gene-AD08_RS00445;Name=AD08_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00445;old_locus_tag=AD08_4743 NZ_JHDJ01000197.1 Protein Homology CDS 9248 10528 . - 0 ID=cds-WP_001037372.1;Parent=gene-AD08_RS00445;Dbxref=Genbank:WP_001037372.1;Name=WP_001037372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418756.1;locus_tag=AD08_RS00445;product=DUF445 domain-containing protein;protein_id=WP_001037372.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 10569 11801 . - . ID=gene-AD08_RS00440;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=AD08_RS00440;old_locus_tag=AD08_4744 NZ_JHDJ01000197.1 Protein Homology CDS 10569 11801 . - 0 ID=cds-WP_001137021.1;Parent=gene-AD08_RS00440;Dbxref=Genbank:WP_001137021.1;Name=WP_001137021.1;gbkey=CDS;gene=mdtM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313327.1;locus_tag=AD08_RS00440;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001137021.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 12059 12271 . + . ID=gene-AD08_RS29975;Name=AD08_RS29975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS29975 NZ_JHDJ01000197.1 Protein Homology CDS 12059 12271 . + 0 ID=cds-WP_001380871.1;Parent=gene-AD08_RS29975;Dbxref=Genbank:WP_001380871.1;Name=WP_001380871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001324155.1;locus_tag=AD08_RS29975;product=hypothetical protein;protein_id=WP_001380871.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 12268 13212 . + . ID=gene-AD08_RS00435;Name=AD08_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00435;old_locus_tag=AD08_4745 NZ_JHDJ01000197.1 Protein Homology CDS 12268 13212 . + 0 ID=cds-WP_032219459.1;Parent=gene-AD08_RS00435;Dbxref=Genbank:WP_032219459.1;Name=WP_032219459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001678496.1;locus_tag=AD08_RS00435;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_032219459.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 13455 14867 . - . ID=gene-AD08_RS00430;Name=AD08_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00430;old_locus_tag=AD08_4746 NZ_JHDJ01000197.1 Protein Homology CDS 13455 14867 . - 0 ID=cds-WP_032219460.1;Parent=gene-AD08_RS00430;Dbxref=Genbank:WP_032219460.1;Name=WP_032219460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418760.1;locus_tag=AD08_RS00430;product=PLP-dependent aminotransferase family protein;protein_id=WP_032219460.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 15044 15208 . + . ID=gene-AD08_RS00425;Name=AD08_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00425;old_locus_tag=AD08_4747 NZ_JHDJ01000197.1 Protein Homology CDS 15044 15208 . + 0 ID=cds-WP_032219461.1;Parent=gene-AD08_RS00425;Dbxref=Genbank:WP_032219461.1;Name=WP_032219461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786105.1;locus_tag=AD08_RS00425;product=DUF1127 domain-containing protein;protein_id=WP_032219461.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 15250 15588 . - . ID=gene-AD08_RS00420;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=AD08_RS00420;old_locus_tag=AD08_4748 NZ_JHDJ01000197.1 Protein Homology CDS 15250 15588 . - 0 ID=cds-WP_000132639.1;Parent=gene-AD08_RS00420;Dbxref=Genbank:WP_000132639.1;Name=WP_000132639.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534835.1;locus_tag=AD08_RS00420;product=endoribonuclease SymE;protein_id=WP_000132639.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 15803 19066 . - . ID=gene-AD08_RS00415;Name=AD08_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00415;old_locus_tag=AD08_4749 NZ_JHDJ01000197.1 Protein Homology CDS 15803 19066 . - 0 ID=cds-WP_032219462.1;Parent=gene-AD08_RS00415;Dbxref=Genbank:WP_032219462.1;Name=WP_032219462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000550711.1;locus_tag=AD08_RS00415;product=type I restriction endonuclease subunit R;protein_id=WP_032219462.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 19161 20552 . - . ID=gene-AD08_RS00410;Name=AD08_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00410;old_locus_tag=AD08_4750 NZ_JHDJ01000197.1 Protein Homology CDS 19161 20552 . - 0 ID=cds-WP_000535334.1;Parent=gene-AD08_RS00410;Dbxref=Genbank:WP_000535334.1;Name=WP_000535334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000535334.1;locus_tag=AD08_RS00410;product=restriction endonuclease subunit S;protein_id=WP_000535334.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 20542 22161 . - . ID=gene-AD08_RS00405;Name=AD08_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00405;old_locus_tag=AD08_4751 NZ_JHDJ01000197.1 Protein Homology CDS 20542 22161 . - 0 ID=cds-WP_001029740.1;Parent=gene-AD08_RS00405;Dbxref=Genbank:WP_001029740.1;Name=WP_001029740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004720069.1;locus_tag=AD08_RS00405;product=type I restriction-modification system subunit M;protein_id=WP_001029740.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq pseudogene 22225 23391 . - . ID=gene-AD08_RS0127225;Name=AD08_RS0127225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS0127225;pseudo=true NZ_JHDJ01000197.1 Protein Homology CDS 22225 23391 . - 0 ID=cds-AD08_RS0127225;Parent=gene-AD08_RS0127225;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800833.1;locus_tag=AD08_RS0127225;product=restriction endonuclease;pseudo=true;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 23588 23875 . + . ID=gene-AD08_RS00400;Name=AD08_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00400;old_locus_tag=AD08_4754 NZ_JHDJ01000197.1 Protein Homology CDS 23588 23875 . + 0 ID=cds-WP_001299718.1;Parent=gene-AD08_RS00400;Dbxref=Genbank:WP_001299718.1;Name=WP_001299718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463387.1;locus_tag=AD08_RS00400;product=membrane protein;protein_id=WP_001299718.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 23862 24164 . + . ID=gene-AD08_RS0127230;Name=AD08_RS0127230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0127230 NZ_JHDJ01000197.1 Protein Homology CDS 23862 24164 . + 0 ID=cds-WP_000063159.1;Parent=gene-AD08_RS0127230;Dbxref=Genbank:WP_000063159.1;Name=WP_000063159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463388.1;locus_tag=AD08_RS0127230;product=BrnA antitoxin family protein;protein_id=WP_000063159.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 24205 25161 . - . ID=gene-AD08_RS00395;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=AD08_RS00395;old_locus_tag=AD08_4756 NZ_JHDJ01000197.1 Protein Homology CDS 24205 25161 . - 0 ID=cds-WP_001299717.1;Parent=gene-AD08_RS00395;Dbxref=Genbank:WP_001299717.1;Name=WP_001299717.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313338.2;locus_tag=AD08_RS00395;product=GTPase;protein_id=WP_001299717.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 25172 25375 . - . ID=gene-AD08_RS00390;Name=AD08_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00390;old_locus_tag=AD08_4757 NZ_JHDJ01000197.1 Protein Homology CDS 25172 25375 . - 0 ID=cds-WP_000467859.1;Parent=gene-AD08_RS00390;Dbxref=Genbank:WP_000467859.1;Name=WP_000467859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313339.1;locus_tag=AD08_RS00390;product=YbdD/YjiX family protein;protein_id=WP_000467859.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 25425 27575 . - . ID=gene-AD08_RS00385;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=AD08_RS00385;old_locus_tag=AD08_4758 NZ_JHDJ01000197.1 Protein Homology CDS 25425 27575 . - 0 ID=cds-WP_032219463.1;Parent=gene-AD08_RS00385;Dbxref=Genbank:WP_032219463.1;Name=WP_032219463.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418774.2;locus_tag=AD08_RS00385;product=pyruvate/proton symporter BtsT;protein_id=WP_032219463.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 27953 29608 . + . ID=gene-AD08_RS00380;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=AD08_RS00380;old_locus_tag=AD08_4759 NZ_JHDJ01000197.1 Protein Homology CDS 27953 29608 . + 0 ID=cds-WP_000919536.1;Parent=gene-AD08_RS00380;Dbxref=Genbank:WP_000919536.1;Name=WP_000919536.1;gbkey=CDS;gene=tsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418775.1;locus_tag=AD08_RS00380;product=methyl-accepting chemotaxis protein;protein_id=WP_000919536.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 29657 31018 . - . ID=gene-AD08_RS00375;Name=AD08_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00375;old_locus_tag=AD08_4760 NZ_JHDJ01000197.1 Protein Homology CDS 29657 31018 . - 0 ID=cds-WP_000410113.1;Parent=gene-AD08_RS00375;Dbxref=Genbank:WP_000410113.1;Name=WP_000410113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418776.1;locus_tag=AD08_RS00375;product=MFS transporter;protein_id=WP_000410113.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 31233 32087 . - . ID=gene-AD08_RS00370;Name=AD08_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00370;old_locus_tag=AD08_4761 NZ_JHDJ01000197.1 Protein Homology CDS 31233 32087 . - 0 ID=cds-WP_032219464.1;Parent=gene-AD08_RS00370;Dbxref=Genbank:WP_032219464.1;Name=WP_032219464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529646.1;locus_tag=AD08_RS00370;product=GntR family transcriptional regulator;protein_id=WP_032219464.1;transl_table=11 NZ_JHDJ01000197.1 RefSeq gene 32256 33323 . - . ID=gene-AD08_RS00365;Name=AD08_RS00365;end_range=33323,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00365;old_locus_tag=AD08_4762;partial=true NZ_JHDJ01000197.1 Protein Homology CDS 32256 33323 . - 0 ID=cds-WP_032217610.1-7;Parent=gene-AD08_RS00365;Dbxref=Genbank:WP_032217610.1;Name=WP_032217610.1;end_range=33323,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS00365;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032217610.1;transl_table=11 ##sequence-region NZ_JHDJ01000198.1 1 24400 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000198.1 RefSeq region 1 24400 . + . ID=NZ_JHDJ01000198.1:1..24400;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000198.1 RefSeq gene 171 1283 . - . ID=gene-AD08_RS00360;Name=AD08_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00360;old_locus_tag=AD08_4763 NZ_JHDJ01000198.1 Protein Homology CDS 171 1283 . - 0 ID=cds-WP_001300563.1-10;Parent=gene-AD08_RS00360;Dbxref=Genbank:WP_001300563.1;Name=WP_001300563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS00360;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq pseudogene 1337 1411 . - . ID=gene-AD08_RS29980;Name=AD08_RS29980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD08_RS29980;partial=true;pseudo=true;start_range=.,1337 NZ_JHDJ01000198.1 Protein Homology CDS 1337 1411 . - 0 ID=cds-AD08_RS29980;Parent=gene-AD08_RS29980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026290.1;locus_tag=AD08_RS29980;partial=true;product=GntR family transcriptional regulator;pseudo=true;start_range=.,1337;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 1550 2572 . + . ID=gene-AD08_RS00355;Name=AD08_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00355;old_locus_tag=AD08_4764 NZ_JHDJ01000198.1 Protein Homology CDS 1550 2572 . + 0 ID=cds-WP_000106030.1;Parent=gene-AD08_RS00355;Dbxref=Genbank:WP_000106030.1;Name=WP_000106030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418778.4;locus_tag=AD08_RS00355;product=L-galactonate oxidoreductase;protein_id=WP_000106030.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 2710 5001 . - . ID=gene-AD08_RS00350;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=AD08_RS00350;old_locus_tag=AD08_4765 NZ_JHDJ01000198.1 Protein Homology CDS 2710 5001 . - 0 ID=cds-WP_001292679.1;Parent=gene-AD08_RS00350;Dbxref=Genbank:WP_001292679.1;Name=WP_001292679.1;gbkey=CDS;gene=opgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=AD08_RS00350;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_001292679.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 5255 5749 . - . ID=gene-AD08_RS00345;Name=AD08_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00345;old_locus_tag=AD08_4766 NZ_JHDJ01000198.1 Protein Homology CDS 5255 5749 . - 0 ID=cds-WP_001308243.1;Parent=gene-AD08_RS00345;Dbxref=Genbank:WP_001308243.1;Name=WP_001308243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418780.2;locus_tag=AD08_RS00345;product=DUF2501 domain-containing protein;protein_id=WP_001308243.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 5798 6535 . - . ID=gene-AD08_RS00340;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=AD08_RS00340;old_locus_tag=AD08_4767 NZ_JHDJ01000198.1 Protein Homology CDS 5798 6535 . - 0 ID=cds-WP_000799911.1;Parent=gene-AD08_RS00340;Dbxref=Genbank:WP_000799911.1;Name=WP_000799911.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001731874.1;locus_tag=AD08_RS00340;product=DNA replication protein DnaC;protein_id=WP_000799911.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 6538 7077 . - . ID=gene-AD08_RS00335;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=AD08_RS00335;old_locus_tag=AD08_4768 NZ_JHDJ01000198.1 Protein Homology CDS 6538 7077 . - 0 ID=cds-WP_001463915.1;Parent=gene-AD08_RS00335;Dbxref=Genbank:WP_001463915.1;Name=WP_001463915.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418782.1;locus_tag=AD08_RS00335;product=primosomal protein DnaT;protein_id=WP_001463915.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 7184 7657 . - . ID=gene-AD08_RS00330;Name=AD08_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00330;old_locus_tag=AD08_4769 NZ_JHDJ01000198.1 Protein Homology CDS 7184 7657 . - 0 ID=cds-WP_000538191.1;Parent=gene-AD08_RS00330;Dbxref=Genbank:WP_000538191.1;Name=WP_000538191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418783.2;locus_tag=AD08_RS00330;product=threonine/serine exporter;protein_id=WP_000538191.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 7648 8418 . - . ID=gene-AD08_RS00325;Name=AD08_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00325;old_locus_tag=AD08_4770 NZ_JHDJ01000198.1 Protein Homology CDS 7648 8418 . - 0 ID=cds-WP_001338213.1;Parent=gene-AD08_RS00325;Dbxref=Genbank:WP_001338213.1;Name=WP_001338213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=AD08_RS00325;product=threonine/serine exporter ThrE family protein;protein_id=WP_001338213.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 9037 9762 . + . ID=gene-AD08_RS00320;Name=AD08_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00320;old_locus_tag=AD08_4771 NZ_JHDJ01000198.1 Protein Homology CDS 9037 9762 . + 0 ID=cds-WP_000936635.1;Parent=gene-AD08_RS00320;Dbxref=Genbank:WP_000936635.1;Name=WP_000936635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313352.1;locus_tag=AD08_RS00320;product=response regulator transcription factor;protein_id=WP_000936635.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq pseudogene 9720 10393 . + . ID=gene-AD08_RS31450;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=pseudogene;locus_tag=AD08_RS31450;pseudo=true NZ_JHDJ01000198.1 Protein Homology CDS 9720 10393 . + 0 ID=cds-AD08_RS31450;Parent=gene-AD08_RS31450;Note=frameshifted;gbkey=CDS;gene=bglJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418786.4;locus_tag=AD08_RS31450;product=DNA-binding transcriptional activator BglJ;pseudo=true;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 10431 11219 . - . ID=gene-AD08_RS00315;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=AD08_RS00315;old_locus_tag=AD08_4774 NZ_JHDJ01000198.1 Protein Homology CDS 10431 11219 . - 0 ID=cds-WP_000331618.1;Parent=gene-AD08_RS00315;Dbxref=Genbank:WP_000331618.1;Name=WP_000331618.1;gbkey=CDS;gene=fhuF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418787.1;locus_tag=AD08_RS00315;product=siderophore-iron reductase FhuF;protein_id=WP_000331618.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 11360 11596 . + . ID=gene-AD08_RS00310;Name=AD08_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00310;old_locus_tag=AD08_4775 NZ_JHDJ01000198.1 Protein Homology CDS 11360 11596 . + 0 ID=cds-WP_001393508.1;Parent=gene-AD08_RS00310;Dbxref=Genbank:WP_001393508.1;Name=WP_001393508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588478.1;locus_tag=AD08_RS00310;product=DUF1435 domain-containing protein;protein_id=WP_001393508.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 11635 11721 . - . ID=gene-AD08_RS00305;Name=AD08_RS00305;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS00305;old_locus_tag=AD08_4776 NZ_JHDJ01000198.1 tRNAscan-SE tRNA 11635 11721 . - . ID=rna-AD08_RS00305;Parent=gene-AD08_RS00305;anticodon=(pos:complement(11685..11687));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS00305;product=tRNA-Leu NZ_JHDJ01000198.1 tRNAscan-SE exon 11635 11721 . - . ID=exon-AD08_RS00305-1;Parent=rna-AD08_RS00305;anticodon=(pos:complement(11685..11687));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS00305;product=tRNA-Leu NZ_JHDJ01000198.1 RefSeq gene 11756 11842 . - . ID=gene-AD08_RS00300;Name=AD08_RS00300;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS00300;old_locus_tag=AD08_4777 NZ_JHDJ01000198.1 tRNAscan-SE tRNA 11756 11842 . - . ID=rna-AD08_RS00300;Parent=gene-AD08_RS00300;anticodon=(pos:complement(11806..11808));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS00300;product=tRNA-Leu NZ_JHDJ01000198.1 tRNAscan-SE exon 11756 11842 . - . ID=exon-AD08_RS00300-1;Parent=rna-AD08_RS00300;anticodon=(pos:complement(11806..11808));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS00300;product=tRNA-Leu NZ_JHDJ01000198.1 RefSeq gene 11871 11957 . - . ID=gene-AD08_RS00295;Name=AD08_RS00295;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD08_RS00295;old_locus_tag=AD08_4778 NZ_JHDJ01000198.1 tRNAscan-SE tRNA 11871 11957 . - . ID=rna-AD08_RS00295;Parent=gene-AD08_RS00295;anticodon=(pos:complement(11921..11923));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS00295;product=tRNA-Leu NZ_JHDJ01000198.1 tRNAscan-SE exon 11871 11957 . - . ID=exon-AD08_RS00295-1;Parent=rna-AD08_RS00295;anticodon=(pos:complement(11921..11923));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;locus_tag=AD08_RS00295;product=tRNA-Leu NZ_JHDJ01000198.1 RefSeq gene 12225 13256 . - . ID=gene-AD08_RS00290;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=AD08_RS00290;old_locus_tag=AD08_4779 NZ_JHDJ01000198.1 Protein Homology CDS 12225 13256 . - 0 ID=cds-WP_032219467.1;Parent=gene-AD08_RS00290;Dbxref=Genbank:WP_032219467.1;Name=WP_032219467.1;gbkey=CDS;gene=rsmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418788.1;locus_tag=AD08_RS00290;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_032219467.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 13359 13772 . + . ID=gene-AD08_RS00285;Name=holD;gbkey=Gene;gene=holD;gene_biotype=protein_coding;locus_tag=AD08_RS00285;old_locus_tag=AD08_4780 NZ_JHDJ01000198.1 Protein Homology CDS 13359 13772 . + 0 ID=cds-WP_000204012.1;Parent=gene-AD08_RS00285;Dbxref=Genbank:WP_000204012.1;Name=WP_000204012.1;gbkey=CDS;gene=holD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418789.1;locus_tag=AD08_RS00285;product=DNA polymerase III subunit psi;protein_id=WP_000204012.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 13741 14187 . + . ID=gene-AD08_RS00280;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=AD08_RS00280;old_locus_tag=AD08_4781 NZ_JHDJ01000198.1 Protein Homology CDS 13741 14187 . + 0 ID=cds-WP_001092461.1;Parent=gene-AD08_RS00280;Dbxref=Genbank:WP_001092461.1;Name=WP_001092461.1;gbkey=CDS;gene=rimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313358.1;locus_tag=AD08_RS00280;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092461.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 14202 14879 . + . ID=gene-AD08_RS00275;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=AD08_RS00275;old_locus_tag=AD08_4782 NZ_JHDJ01000198.1 Protein Homology CDS 14202 14879 . + 0 ID=cds-WP_032219468.1;Parent=gene-AD08_RS00275;Dbxref=Genbank:WP_032219468.1;Name=WP_032219468.1;gbkey=CDS;gene=yjjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=AD08_RS00275;product=pyrimidine 5'-nucleotidase;protein_id=WP_032219468.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 15265 16500 . + . ID=gene-AD08_RS00270;Name=AD08_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00270;old_locus_tag=AD08_4784 NZ_JHDJ01000198.1 Protein Homology CDS 15265 16500 . + 0 ID=cds-WP_001218291.1;Parent=gene-AD08_RS00270;Dbxref=Genbank:WP_001218291.1;Name=WP_001218291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218298.1;locus_tag=AD08_RS00270;product=site-specific integrase;protein_id=WP_001218291.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 16659 17792 . + . ID=gene-AD08_RS00265;Name=AD08_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00265;old_locus_tag=AD08_4785 NZ_JHDJ01000198.1 Protein Homology CDS 16659 17792 . + 0 ID=cds-WP_001105426.1;Parent=gene-AD08_RS00265;Dbxref=Genbank:WP_001105426.1;Name=WP_001105426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105426.1;locus_tag=AD08_RS00265;product=hypothetical protein;protein_id=WP_001105426.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 18231 18767 . - . ID=gene-AD08_RS00260;Name=yfdR;gbkey=Gene;gene=yfdR;gene_biotype=protein_coding;locus_tag=AD08_RS00260;old_locus_tag=AD08_4786 NZ_JHDJ01000198.1 Protein Homology CDS 18231 18767 . - 0 ID=cds-WP_032219469.1;Parent=gene-AD08_RS00260;Dbxref=Genbank:WP_032219469.1;Name=WP_032219469.1;gbkey=CDS;gene=yfdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416862.2;locus_tag=AD08_RS00260;product=5'-deoxynucleotidase;protein_id=WP_032219469.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 18896 19720 . - . ID=gene-AD08_RS00255;Name=AD08_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00255;old_locus_tag=AD08_4787 NZ_JHDJ01000198.1 Protein Homology CDS 18896 19720 . - 0 ID=cds-WP_016232134.1;Parent=gene-AD08_RS00255;Dbxref=Genbank:WP_016232134.1;Name=WP_016232134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416861.1;locus_tag=AD08_RS00255;product=DUF2303 family protein;protein_id=WP_016232134.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 19786 20148 . - . ID=gene-AD08_RS00250;Name=AD08_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00250;old_locus_tag=AD08_4788 NZ_JHDJ01000198.1 Protein Homology CDS 19786 20148 . - 0 ID=cds-WP_000135680.1;Parent=gene-AD08_RS00250;Dbxref=Genbank:WP_000135680.1;Name=WP_000135680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416860.4;locus_tag=AD08_RS00250;product=hypothetical protein;protein_id=WP_000135680.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 21081 22166 . - . ID=gene-AD08_RS00245;Name=AD08_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00245;old_locus_tag=AD08_4789 NZ_JHDJ01000198.1 Protein Homology CDS 21081 22166 . - 0 ID=cds-WP_000606712.1;Parent=gene-AD08_RS00245;Dbxref=Genbank:WP_000606712.1;Name=WP_000606712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606712.1;locus_tag=AD08_RS00245;product=ParA family protein;protein_id=WP_000606712.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 22401 23105 . - . ID=gene-AD08_RS00240;Name=AD08_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00240;old_locus_tag=AD08_4790 NZ_JHDJ01000198.1 Protein Homology CDS 22401 23105 . - 0 ID=cds-WP_001410974.1;Parent=gene-AD08_RS00240;Dbxref=Genbank:WP_001410974.1;Name=WP_001410974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001410974.1;locus_tag=AD08_RS00240;product=helix-turn-helix domain-containing protein;protein_id=WP_001410974.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 23212 23475 . + . ID=gene-AD08_RS0127250;Name=AD08_RS0127250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0127250 NZ_JHDJ01000198.1 Protein Homology CDS 23212 23475 . + 0 ID=cds-WP_000098316.1;Parent=gene-AD08_RS0127250;Dbxref=Genbank:WP_000098316.1;Name=WP_000098316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000098316.1;locus_tag=AD08_RS0127250;product=hypothetical protein;protein_id=WP_000098316.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 23504 24088 . + . ID=gene-AD08_RS00235;Name=AD08_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00235;old_locus_tag=AD08_4791 NZ_JHDJ01000198.1 Protein Homology CDS 23504 24088 . + 0 ID=cds-WP_032219470.1;Parent=gene-AD08_RS00235;Dbxref=Genbank:WP_032219470.1;Name=WP_032219470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000515837.1;locus_tag=AD08_RS00235;product=hypothetical protein;protein_id=WP_032219470.1;transl_table=11 NZ_JHDJ01000198.1 RefSeq gene 24234 24400 . + . ID=gene-AD08_RS30000;Name=AD08_RS30000;end_range=24400,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS30000;partial=true NZ_JHDJ01000198.1 Protein Homology CDS 24234 24400 . + 0 ID=cds-WP_071827451.1;Parent=gene-AD08_RS30000;Dbxref=Genbank:WP_071827451.1;Name=WP_071827451.1;end_range=24400,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001379286.1;locus_tag=AD08_RS30000;partial=true;product=DUF4222 domain-containing protein;protein_id=WP_071827451.1;transl_table=11 ##sequence-region NZ_JHDJ01000199.1 1 49536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444243 NZ_JHDJ01000199.1 RefSeq region 1 49536 . + . ID=NZ_JHDJ01000199.1:1..49536;Dbxref=taxon:1444243;collection-date=04-Jul-2009;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-110-08_S4_C2 NZ_JHDJ01000199.1 RefSeq gene 1 168 . + . ID=gene-AD08_RS31845;Name=AD08_RS31845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31845;old_locus_tag=AD08_4793;partial=true;start_range=.,1 NZ_JHDJ01000199.1 GeneMarkS-2+ CDS 1 168 . + 0 ID=cds-WP_162752721.1;Parent=gene-AD08_RS31845;Dbxref=Genbank:WP_162752721.1;Name=WP_162752721.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD08_RS31845;partial=true;product=hypothetical protein;protein_id=WP_162752721.1;start_range=.,1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 205 453 . - . ID=gene-AD08_RS00225;Name=AD08_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00225;old_locus_tag=AD08_4794 NZ_JHDJ01000199.1 Protein Homology CDS 205 453 . - 0 ID=cds-WP_032219474.1;Parent=gene-AD08_RS00225;Dbxref=Genbank:WP_032219474.1;Name=WP_032219474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310966.1;locus_tag=AD08_RS00225;product=DinI family protein;protein_id=WP_032219474.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 673 2259 . + . ID=gene-AD08_RS00220;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=AD08_RS00220;old_locus_tag=AD08_4796 NZ_JHDJ01000199.1 Protein Homology CDS 673 2259 . + 0 ID=cds-WP_032219476.1;Parent=gene-AD08_RS00220;Dbxref=Genbank:WP_032219476.1;Name=WP_032219476.1;gbkey=CDS;gene=prfC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000202568.1;locus_tag=AD08_RS00220;product=peptide chain release factor 3;protein_id=WP_032219476.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 2652 3257 . + . ID=gene-AD08_RS00215;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=AD08_RS00215;old_locus_tag=AD08_4797 NZ_JHDJ01000199.1 Protein Homology CDS 2652 3257 . + 0 ID=cds-WP_001295748.1;Parent=gene-AD08_RS00215;Dbxref=Genbank:WP_001295748.1;Name=WP_001295748.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418793.1;locus_tag=AD08_RS00215;product=molecular chaperone OsmY;protein_id=WP_001295748.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 3384 3545 . + . ID=gene-AD08_RS00210;Name=AD08_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00210;old_locus_tag=AD08_4798 NZ_JHDJ01000199.1 Protein Homology CDS 3384 3545 . + 0 ID=cds-WP_000490275.1;Parent=gene-AD08_RS00210;Dbxref=Genbank:WP_000490275.1;Name=WP_000490275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=AD08_RS00210;product=DUF1328 domain-containing protein;protein_id=WP_000490275.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 3667 4740 . + . ID=gene-AD08_RS00205;Name=AD08_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00205;old_locus_tag=AD08_4799 NZ_JHDJ01000199.1 Protein Homology CDS 3667 4740 . + 0 ID=cds-WP_001299799.1;Parent=gene-AD08_RS00205;Dbxref=Genbank:WP_001299799.1;Name=WP_001299799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418794.1;locus_tag=AD08_RS00205;product=patatin family protein;protein_id=WP_001299799.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 4737 5516 . + . ID=gene-AD08_RS00200;Name=AD08_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00200;old_locus_tag=AD08_4800 NZ_JHDJ01000199.1 Protein Homology CDS 4737 5516 . + 0 ID=cds-WP_000563040.1;Parent=gene-AD08_RS00200;Dbxref=Genbank:WP_000563040.1;Name=WP_000563040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026291.2;locus_tag=AD08_RS00200;product=metal-dependent hydrolase;protein_id=WP_000563040.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 5936 6799 . - . ID=gene-AD08_RS00195;Name=yjjW;gbkey=Gene;gene=yjjW;gene_biotype=protein_coding;locus_tag=AD08_RS00195;old_locus_tag=AD08_4801 NZ_JHDJ01000199.1 Protein Homology CDS 5936 6799 . - 0 ID=cds-WP_032219479.1;Parent=gene-AD08_RS00195;Dbxref=Genbank:WP_032219479.1;Name=WP_032219479.1;gbkey=CDS;gene=yjjW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418796.1;locus_tag=AD08_RS00195;product=YjjW family glycine radical enzyme activase;protein_id=WP_032219479.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 6771 8321 . - . ID=gene-AD08_RS00190;Name=AD08_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00190;old_locus_tag=AD08_4803 NZ_JHDJ01000199.1 Protein Homology CDS 6771 8321 . - 0 ID=cds-WP_001143253.1;Parent=gene-AD08_RS00190;Dbxref=Genbank:WP_001143253.1;Name=WP_001143253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418797.1;locus_tag=AD08_RS00190;product=YjjI family glycine radical enzyme;protein_id=WP_001143253.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 8579 9358 . + . ID=gene-AD08_RS00185;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=AD08_RS00185;old_locus_tag=AD08_4805 NZ_JHDJ01000199.1 Protein Homology CDS 8579 9358 . + 0 ID=cds-WP_001298497.1;Parent=gene-AD08_RS00185;Dbxref=Genbank:WP_001298497.1;Name=WP_001298497.1;gbkey=CDS;gene=deoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=AD08_RS00185;product=deoxyribose-phosphate aldolase;protein_id=WP_001298497.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 9485 10807 . + . ID=gene-AD08_RS00180;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=AD08_RS00180;old_locus_tag=AD08_4806 NZ_JHDJ01000199.1 Protein Homology CDS 9485 10807 . + 0 ID=cds-WP_000477807.1;Parent=gene-AD08_RS00180;Dbxref=Genbank:WP_000477807.1;Name=WP_000477807.1;gbkey=CDS;gene=deoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418799.1;locus_tag=AD08_RS00180;product=thymidine phosphorylase;protein_id=WP_000477807.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 10859 12082 . + . ID=gene-AD08_RS00175;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=AD08_RS00175;old_locus_tag=AD08_4807 NZ_JHDJ01000199.1 Protein Homology CDS 10859 12082 . + 0 ID=cds-WP_000816471.1;Parent=gene-AD08_RS00175;Dbxref=Genbank:WP_000816471.1;Name=WP_000816471.1;gbkey=CDS;gene=deoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313369.1;locus_tag=AD08_RS00175;product=phosphopentomutase;protein_id=WP_000816471.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 12139 12858 . + . ID=gene-AD08_RS00170;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AD08_RS00170;old_locus_tag=AD08_4808 NZ_JHDJ01000199.1 Protein Homology CDS 12139 12858 . + 0 ID=cds-WP_000224877.1;Parent=gene-AD08_RS00170;Dbxref=Genbank:WP_000224877.1;Name=WP_000224877.1;gbkey=CDS;gene=deoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313370.1;locus_tag=AD08_RS00170;product=purine-nucleoside phosphorylase;protein_id=WP_000224877.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 13025 14356 . + . ID=gene-AD08_RS00165;Name=yjjJ;gbkey=Gene;gene=yjjJ;gene_biotype=protein_coding;locus_tag=AD08_RS00165;old_locus_tag=AD08_4809 NZ_JHDJ01000199.1 Protein Homology CDS 13025 14356 . + 0 ID=cds-WP_001293115.1;Parent=gene-AD08_RS00165;Dbxref=Genbank:WP_001293115.1;Name=WP_001293115.1;gbkey=CDS;gene=yjjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418802.1;locus_tag=AD08_RS00165;product=type II toxin-antitoxin system HipA family toxin YjjJ;protein_id=WP_001293115.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 14357 15373 . - . ID=gene-AD08_RS31455;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=AD08_RS31455;old_locus_tag=AD08_4810 NZ_JHDJ01000199.1 Protein Homology CDS 14357 15373 . - 0 ID=cds-WP_000105884.1;Parent=gene-AD08_RS31455;Dbxref=Genbank:WP_000105884.1;Name=WP_000105884.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418803.1;locus_tag=AD08_RS31455;product=lipoate--protein ligase LplA;protein_id=WP_000105884.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 15401 16045 . - . ID=gene-AD08_RS31460;Name=AD08_RS31460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS31460;old_locus_tag=AD08_4811 NZ_JHDJ01000199.1 Protein Homology CDS 15401 16045 . - 0 ID=cds-WP_000124615.1;Parent=gene-AD08_RS31460;Dbxref=Genbank:WP_000124615.1;Name=WP_000124615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418804.1;locus_tag=AD08_RS31460;product=YtjB family periplasmic protein;protein_id=WP_000124615.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 16151 17119 . + . ID=gene-AD08_RS00150;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=AD08_RS00150;old_locus_tag=AD08_4812 NZ_JHDJ01000199.1 Protein Homology CDS 16151 17119 . + 0 ID=cds-WP_001426788.1;Parent=gene-AD08_RS00150;Dbxref=Genbank:WP_001426788.1;Name=WP_001426788.1;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313373.1;locus_tag=AD08_RS00150;product=phosphoserine phosphatase;protein_id=WP_001426788.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 17168 18550 . + . ID=gene-AD08_RS00145;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=AD08_RS00145;old_locus_tag=AD08_4813 NZ_JHDJ01000199.1 Protein Homology CDS 17168 18550 . + 0 ID=cds-WP_001029687.1;Parent=gene-AD08_RS00145;Dbxref=Genbank:WP_001029687.1;Name=WP_001029687.1;gbkey=CDS;gene=radA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=AD08_RS00145;product=DNA repair protein RadA;protein_id=WP_001029687.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 18571 19803 . + . ID=gene-AD08_RS00140;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=AD08_RS00140;old_locus_tag=AD08_4814 NZ_JHDJ01000199.1 Protein Homology CDS 18571 19803 . + 0 ID=cds-WP_032219481.1;Parent=gene-AD08_RS00140;Dbxref=Genbank:WP_032219481.1;Name=WP_032219481.1;gbkey=CDS;gene=nadR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418807.4;locus_tag=AD08_RS00140;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_032219481.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 20111 21778 . - . ID=gene-AD08_RS00130;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=AD08_RS00130;old_locus_tag=AD08_4816 NZ_JHDJ01000199.1 Protein Homology CDS 20111 21778 . - 0 ID=cds-WP_000046749.1;Parent=gene-AD08_RS00130;Dbxref=Genbank:WP_000046749.1;Name=WP_000046749.1;gbkey=CDS;gene=ettA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313376.1;locus_tag=AD08_RS00130;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046749.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 21989 23926 . + . ID=gene-AD08_RS00125;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=AD08_RS00125;old_locus_tag=AD08_4817 NZ_JHDJ01000199.1 Protein Homology CDS 21989 23926 . + 0 ID=cds-WP_000409451.1;Parent=gene-AD08_RS00125;Dbxref=Genbank:WP_000409451.1;Name=WP_000409451.1;gbkey=CDS;gene=sltY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=AD08_RS00125;product=murein transglycosylase;protein_id=WP_000409451.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 24016 24342 . + . ID=gene-AD08_RS00120;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=AD08_RS00120;old_locus_tag=AD08_4818 NZ_JHDJ01000199.1 Protein Homology CDS 24016 24342 . + 0 ID=cds-WP_001573434.1;Parent=gene-AD08_RS00120;Dbxref=Genbank:WP_001573434.1;Name=WP_001573434.1;gbkey=CDS;gene=trpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418810.1;locus_tag=AD08_RS00120;product=trp operon repressor;protein_id=WP_001573434.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 24489 25001 . - . ID=gene-AD08_RS00115;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=AD08_RS00115;old_locus_tag=AD08_4819 NZ_JHDJ01000199.1 Protein Homology CDS 24489 25001 . - 0 ID=cds-WP_001338221.1;Parent=gene-AD08_RS00115;Dbxref=Genbank:WP_001338221.1;Name=WP_001338221.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418811.2;locus_tag=AD08_RS00115;product=non-canonical purine NTP phosphatase;protein_id=WP_001338221.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 25053 25700 . + . ID=gene-AD08_RS00110;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=AD08_RS00110;old_locus_tag=AD08_4820 NZ_JHDJ01000199.1 Protein Homology CDS 25053 25700 . + 0 ID=cds-WP_000942344.1;Parent=gene-AD08_RS00110;Dbxref=Genbank:WP_000942344.1;Name=WP_000942344.1;gbkey=CDS;gene=gpmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313380.1;locus_tag=AD08_RS00110;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942344.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 25697 26566 . - . ID=gene-AD08_RS00105;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=AD08_RS00105;old_locus_tag=AD08_4821 NZ_JHDJ01000199.1 Protein Homology CDS 25697 26566 . - 0 ID=cds-WP_000371666.1;Parent=gene-AD08_RS00105;Dbxref=Genbank:WP_000371666.1;Name=WP_000371666.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313381.1;locus_tag=AD08_RS00105;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371666.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 26777 27250 . + . ID=gene-AD08_RS00100;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=AD08_RS00100;old_locus_tag=AD08_4822 NZ_JHDJ01000199.1 Protein Homology CDS 26777 27250 . + 0 ID=cds-WP_000875487.1;Parent=gene-AD08_RS00100;Dbxref=Genbank:WP_000875487.1;Name=WP_000875487.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313382.1;locus_tag=AD08_RS00100;product=protein CreA;protein_id=WP_000875487.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 27263 27952 . + . ID=gene-AD08_RS00095;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=AD08_RS00095;old_locus_tag=AD08_4823 NZ_JHDJ01000199.1 Protein Homology CDS 27263 27952 . + 0 ID=cds-WP_001188654.1;Parent=gene-AD08_RS00095;Dbxref=Genbank:WP_001188654.1;Name=WP_001188654.1;gbkey=CDS;gene=creB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418815.1;locus_tag=AD08_RS00095;product=two-component system response regulator CreB;protein_id=WP_001188654.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 27952 29376 . + . ID=gene-AD08_RS00090;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=AD08_RS00090;old_locus_tag=AD08_4824 NZ_JHDJ01000199.1 Protein Homology CDS 27952 29376 . + 0 ID=cds-WP_001219577.1;Parent=gene-AD08_RS00090;Dbxref=Genbank:WP_001219577.1;Name=WP_001219577.1;gbkey=CDS;gene=creC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418816.1;locus_tag=AD08_RS00090;product=two-component system sensor histidine kinase CreC;protein_id=WP_001219577.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 29434 30786 . + . ID=gene-AD08_RS00085;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=AD08_RS00085;old_locus_tag=AD08_4825 NZ_JHDJ01000199.1 Protein Homology CDS 29434 30786 . + 0 ID=cds-WP_000920294.1;Parent=gene-AD08_RS00085;Dbxref=Genbank:WP_000920294.1;Name=WP_000920294.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418817.1;locus_tag=AD08_RS00085;product=cell envelope integrity protein CreD;protein_id=WP_000920294.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 30846 31562 . - . ID=gene-AD08_RS00080;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=AD08_RS00080;old_locus_tag=AD08_4826 NZ_JHDJ01000199.1 Protein Homology CDS 30846 31562 . - 0 ID=cds-WP_001194358.1;Parent=gene-AD08_RS00080;Dbxref=Genbank:WP_001194358.1;Name=WP_001194358.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856501.1;locus_tag=AD08_RS00080;product=two-component system response regulator ArcA;protein_id=WP_001194358.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 31658 31798 . + . ID=gene-AD08_RS0127265;Name=AD08_RS0127265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS0127265 NZ_JHDJ01000199.1 Protein Homology CDS 31658 31798 . + 0 ID=cds-WP_001303782.1;Parent=gene-AD08_RS0127265;Dbxref=Genbank:WP_001303782.1;Name=WP_001303782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418819.1;locus_tag=AD08_RS0127265;product=hypothetical protein;protein_id=WP_001303782.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 32198 32884 . + . ID=gene-AD08_RS00075;Name=AD08_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00075;old_locus_tag=AD08_4827 NZ_JHDJ01000199.1 Protein Homology CDS 32198 32884 . + 0 ID=cds-WP_001223132.1;Parent=gene-AD08_RS00075;Dbxref=Genbank:WP_001223132.1;Name=WP_001223132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418820.1;locus_tag=AD08_RS00075;product=tRNA/rRNA methyltransferase;protein_id=WP_001223132.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 33098 33163 . + . ID=gene-AD08_RS0127270;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=AD08_RS0127270 NZ_JHDJ01000199.1 Protein Homology CDS 33098 33163 . + 0 ID=cds-WP_001386572.1;Parent=gene-AD08_RS0127270;Dbxref=Genbank:WP_001386572.1;Name=WP_001386572.1;gbkey=CDS;gene=thrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414542.1;locus_tag=AD08_RS0127270;product=thr operon leader peptide;protein_id=WP_001386572.1;transl_table=11 NZ_JHDJ01000199.1 cmsearch sequence_feature 33099 33218 . + . ID=id-NZ_JHDJ01000199.1:33099..33218;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_JHDJ01000199.1 RefSeq gene 33245 35707 . + . ID=gene-AD08_RS00070;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=AD08_RS00070;old_locus_tag=AD08_4828 NZ_JHDJ01000199.1 Protein Homology CDS 33245 35707 . + 0 ID=cds-WP_032219486.1;Parent=gene-AD08_RS00070;Dbxref=Genbank:WP_032219486.1;Name=WP_032219486.1;gbkey=CDS;gene=thrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=AD08_RS00070;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_032219486.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 35709 36641 . + . ID=gene-AD08_RS00065;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=AD08_RS00065;old_locus_tag=AD08_4829 NZ_JHDJ01000199.1 Protein Homology CDS 35709 36641 . + 0 ID=cds-WP_032219487.1;Parent=gene-AD08_RS00065;Dbxref=Genbank:WP_032219487.1;Name=WP_032219487.1;gbkey=CDS;gene=thrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414544.1;locus_tag=AD08_RS00065;product=homoserine kinase;protein_id=WP_032219487.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 36642 37928 . + . ID=gene-AD08_RS00060;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=AD08_RS00060;old_locus_tag=AD08_4830 NZ_JHDJ01000199.1 Protein Homology CDS 36642 37928 . + 0 ID=cds-WP_000781074.1;Parent=gene-AD08_RS00060;Dbxref=Genbank:WP_000781074.1;Name=WP_000781074.1;gbkey=CDS;gene=thrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414545.1;locus_tag=AD08_RS00060;product=threonine synthase;protein_id=WP_000781074.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 38142 38438 . + . ID=gene-AD08_RS00055;Name=AD08_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00055;old_locus_tag=AD08_4831 NZ_JHDJ01000199.1 Protein Homology CDS 38142 38438 . + 0 ID=cds-WP_000738719.1;Parent=gene-AD08_RS00055;Dbxref=Genbank:WP_000738719.1;Name=WP_000738719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414546.1;locus_tag=AD08_RS00055;product=DUF2502 domain-containing protein;protein_id=WP_000738719.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 38591 39367 . - . ID=gene-AD08_RS00050;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=AD08_RS00050;old_locus_tag=AD08_4832 NZ_JHDJ01000199.1 Protein Homology CDS 38591 39367 . - 0 ID=cds-WP_000906197.1;Parent=gene-AD08_RS00050;Dbxref=Genbank:WP_000906197.1;Name=WP_000906197.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414547.1;locus_tag=AD08_RS00050;product=peroxide stress protein YaaA;protein_id=WP_000906197.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 39437 40867 . - . ID=gene-AD08_RS00045;Name=AD08_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00045;old_locus_tag=AD08_4833 NZ_JHDJ01000199.1 Protein Homology CDS 39437 40867 . - 0 ID=cds-WP_032219489.1;Parent=gene-AD08_RS00045;Dbxref=Genbank:WP_032219489.1;Name=WP_032219489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414548.1;locus_tag=AD08_RS00045;product=sodium:alanine symporter family protein;protein_id=WP_032219489.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 41146 42099 . + . ID=gene-AD08_RS00040;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AD08_RS00040;old_locus_tag=AD08_4834 NZ_JHDJ01000199.1 Protein Homology CDS 41146 42099 . + 0 ID=cds-WP_000130185.1;Parent=gene-AD08_RS00040;Dbxref=Genbank:WP_000130185.1;Name=WP_000130185.1;gbkey=CDS;gene=tal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308035.1;locus_tag=AD08_RS00040;product=transaldolase;protein_id=WP_000130185.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 42214 42801 . + . ID=gene-AD08_RS00035;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=AD08_RS00035;old_locus_tag=AD08_4835 NZ_JHDJ01000199.1 Protein Homology CDS 42214 42801 . + 0 ID=cds-WP_032219491.1;Parent=gene-AD08_RS00035;Dbxref=Genbank:WP_032219491.1;Name=WP_032219491.1;gbkey=CDS;gene=mog;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308036.1;locus_tag=AD08_RS00035;product=molybdopterin adenylyltransferase;protein_id=WP_032219491.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 42836 43402 . - . ID=gene-AD08_RS00030;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=AD08_RS00030;old_locus_tag=AD08_4836 NZ_JHDJ01000199.1 Protein Homology CDS 42836 43402 . - 0 ID=cds-WP_000528538.1;Parent=gene-AD08_RS00030;Dbxref=Genbank:WP_000528538.1;Name=WP_000528538.1;gbkey=CDS;gene=satP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308037.1;locus_tag=AD08_RS00030;product=acetate uptake transporter;protein_id=WP_000528538.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 43551 44264 . - . ID=gene-AD08_RS00025;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=AD08_RS00025;old_locus_tag=AD08_4837 NZ_JHDJ01000199.1 Protein Homology CDS 43551 44264 . - 0 ID=cds-WP_001102367.1;Parent=gene-AD08_RS00025;Dbxref=Genbank:WP_001102367.1;Name=WP_001102367.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414552.1;locus_tag=AD08_RS00025;product=acidic protein MsyB;protein_id=WP_001102367.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 44290 44694 . - . ID=gene-AD08_RS00020;Name=AD08_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00020;old_locus_tag=AD08_4838 NZ_JHDJ01000199.1 Protein Homology CDS 44290 44694 . - 0 ID=cds-WP_000843565.1;Parent=gene-AD08_RS00020;Dbxref=Genbank:WP_000843565.1;Name=WP_000843565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414554.1;locus_tag=AD08_RS00020;product=DUF2541 family protein;protein_id=WP_000843565.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 45071 46987 . + . ID=gene-AD08_RS00015;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AD08_RS00015;old_locus_tag=AD08_4839 NZ_JHDJ01000199.1 Protein Homology CDS 45071 46987 . + 0 ID=cds-WP_000516135.1;Parent=gene-AD08_RS00015;Dbxref=Genbank:WP_000516135.1;Name=WP_000516135.1;gbkey=CDS;gene=dnaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=AD08_RS00015;product=molecular chaperone DnaK;protein_id=WP_000516135.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 47076 48206 . + . ID=gene-AD08_RS00010;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AD08_RS00010;old_locus_tag=AD08_4840 NZ_JHDJ01000199.1 Protein Homology CDS 47076 48206 . + 0 ID=cds-WP_001118476.1;Parent=gene-AD08_RS00010;Dbxref=Genbank:WP_001118476.1;Name=WP_001118476.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414556.1;locus_tag=AD08_RS00010;product=molecular chaperone DnaJ;protein_id=WP_001118476.1;transl_table=11 NZ_JHDJ01000199.1 RefSeq gene 48469 49536 . - . ID=gene-AD08_RS00005;Name=AD08_RS00005;end_range=49536,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD08_RS00005;old_locus_tag=AD08_4841;partial=true NZ_JHDJ01000199.1 Protein Homology CDS 48469 49536 . - 0 ID=cds-WP_032217610.1-8;Parent=gene-AD08_RS00005;Dbxref=Genbank:WP_032217610.1;Name=WP_032217610.1;end_range=49536,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD08_RS00005;partial=true;product=IS4-like element IS421 family transposase;protein_id=WP_032217610.1;transl_table=11 ###